BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4753
(809 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 8/192 (4%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TTS+ + + + L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E
Sbjct: 286 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNET 342
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + R +DV + +P+ V+I Y LHRD K + PE + P RF +N
Sbjct: 343 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 402
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE---DLTLLGEL 794
+PY Y PF +GPRNCIG +FA++ K+ L +L+ F + + L+L G
Sbjct: 403 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGG-- 460
Query: 795 ILRPQDGIRVRL 806
+L+P+ + +++
Sbjct: 461 LLQPEKPVVLKV 472
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 211/551 (38%), Gaps = 154/551 (27%)
Query: 48 IPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWL---GGTPYVFIHTAE 104
IPGPT LP LGN + +++ + HKK ++W G P + I +
Sbjct: 17 IPGPTPLPFLGNILS--------YHKGFCMFDMECHKK-YGKVWGFYDGQQPVLAITDPD 67
Query: 105 NAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHI-----WHQRRKILTPAFHFRILED 159
+ +L S + P+ G + SA I W + R +L+P F L++
Sbjct: 68 MIKTVLVKE----CYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKE 123
Query: 160 FVEVF-QEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYV 218
V + Q V + ++D++ T+ G I++ + +V
Sbjct: 124 MVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV 183
Query: 219 KAVYEL------------SSLYKKHQRCLNTLH--SFSYKVINERKAELKARKNTEDETI 264
+ +L +++ L L+ F +V N + K+ K ++ +
Sbjct: 184 ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR---KSVKRMKESRL 240
Query: 265 EDPTEHVKKRPAFLDLLIEA-----SERHN-LTDENIREEVDTFMFEGHDTTSAAICWTL 318
ED +H R FL L+I++ +E H L+D + + F+F G++TTS+ + + +
Sbjct: 241 EDTQKH---RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 297
Query: 319 LLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 378
L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E LRL+P
Sbjct: 298 YELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRLFPI------ 348
Query: 379 KLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDV 438
A+RL R +DV
Sbjct: 349 -----------------------------------------AMRL-------ERVCKKDV 360
Query: 439 PLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDT 498
+ +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 361 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN------------------ 402
Query: 499 EVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEE 558
+N +PY Y PF +GPRNCIG +FA++
Sbjct: 403 ----------------------------KDNI---DPYIYTPFGSGPRNCIGMRFALMNM 431
Query: 559 KVILANILRRF 569
K+ L +L+ F
Sbjct: 432 KLALIRVLQNF 442
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 8/192 (4%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TTS+ + + + L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E
Sbjct: 287 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNET 343
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + R +DV + +P+ V+I Y LHRD K + PE + P RF +N
Sbjct: 344 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 403
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE---DLTLLGEL 794
+PY Y PF +GPRNCIG +FA++ K+ L +L+ F + + L+L G
Sbjct: 404 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGG-- 461
Query: 795 ILRPQDGIRVRL 806
+L+P+ + +++
Sbjct: 462 LLQPEKPVVLKV 473
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 211/551 (38%), Gaps = 154/551 (27%)
Query: 48 IPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWL---GGTPYVFIHTAE 104
IPGPT LP LGN + +++ + HKK ++W G P + I +
Sbjct: 18 IPGPTPLPFLGNILS--------YHKGFCMFDMECHKK-YGKVWGFYDGQQPVLAITDPD 68
Query: 105 NAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHI-----WHQRRKILTPAFHFRILED 159
+ +L S + P+ G + SA I W + R +L+P F L++
Sbjct: 69 MIKTVLVKE----CYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKE 124
Query: 160 FVEVF-QEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYV 218
V + Q V + ++D++ T+ G I++ + +V
Sbjct: 125 MVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV 184
Query: 219 KAVYEL------------SSLYKKHQRCLNTLH--SFSYKVINERKAELKARKNTEDETI 264
+ +L +++ L L+ F +V N + K+ K ++ +
Sbjct: 185 ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR---KSVKRMKESRL 241
Query: 265 EDPTEHVKKRPAFLDLLIEA-----SERHN-LTDENIREEVDTFMFEGHDTTSAAICWTL 318
ED +H R FL L+I++ +E H L+D + + F+F G++TTS+ + + +
Sbjct: 242 EDTQKH---RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 298
Query: 319 LLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 378
L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E LRL+P
Sbjct: 299 YELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRLFPI------ 349
Query: 379 KLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDV 438
A+RL R +DV
Sbjct: 350 -----------------------------------------AMRL-------ERVCKKDV 361
Query: 439 PLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDT 498
+ +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 362 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN------------------ 403
Query: 499 EVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEE 558
+N +PY Y PF +GPRNCIG +FA++
Sbjct: 404 ----------------------------KDNI---DPYIYTPFGSGPRNCIGMRFALMNM 432
Query: 559 KVILANILRRF 569
K+ L +L+ F
Sbjct: 433 KLALIRVLQNF 443
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 8/192 (4%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TTS+ + + + L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNET 341
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + R +DV + +P+ V+I Y LHRD K + PE + P RF +N
Sbjct: 342 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 401
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE---DLTLLGEL 794
+PY Y PF +GPRNCIG +FA++ K+ L +L+ F + + L+L G
Sbjct: 402 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGG-- 459
Query: 795 ILRPQDGIRVRL 806
+L+P+ + +++
Sbjct: 460 LLQPEKPVVLKV 471
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 211/551 (38%), Gaps = 154/551 (27%)
Query: 48 IPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWL---GGTPYVFIHTAE 104
IPGPT LP LGN + +++ + HKK ++W G P + I +
Sbjct: 16 IPGPTPLPFLGNILS--------YHKGFCMFDMECHKK-YGKVWGFYDGQQPVLAITDPD 66
Query: 105 NAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHI-----WHQRRKILTPAFHFRILED 159
+ +L S + P+ G + SA I W + R +L+P F L++
Sbjct: 67 MIKTVLVKECY----SVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKE 122
Query: 160 FVEVF-QEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYV 218
V + Q V + ++D++ T+ G I++ + +V
Sbjct: 123 MVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV 182
Query: 219 KAVYEL------------SSLYKKHQRCLNTLH--SFSYKVINERKAELKARKNTEDETI 264
+ +L +++ L L+ F +V N + K+ K ++ +
Sbjct: 183 ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR---KSVKRMKESRL 239
Query: 265 EDPTEHVKKRPAFLDLLIEA-----SERHN-LTDENIREEVDTFMFEGHDTTSAAICWTL 318
ED +H R FL L+I++ +E H L+D + + F+F G++TTS+ + + +
Sbjct: 240 EDTQKH---RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 296
Query: 319 LLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 378
L ++ ++Q K+ EEI A P + P T ++ M+YL+ + E LRL+P
Sbjct: 297 YELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRLFPI------ 347
Query: 379 KLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDV 438
A+RL R +DV
Sbjct: 348 -----------------------------------------AMRL-------ERVCKKDV 359
Query: 439 PLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDT 498
+ +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 360 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN------------------ 401
Query: 499 EVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEE 558
+N +PY Y PF +GPRNCIG +FA++
Sbjct: 402 ----------------------------KDNI---DPYIYTPFGSGPRNCIGMRFALMNM 430
Query: 559 KVILANILRRF 569
K+ L +L+ F
Sbjct: 431 KLALIRVLQNF 441
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
DTT+ + TL L N ++Q + +E +A A+S+ ++ + L A +KE L
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAA---AASISEHPQKATTELPLLRAALKETL 347
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RLYP F+ R +S D+ L +Y +P T V + +Y+L R+A +FPRPE Y+P R+L
Sbjct: 348 RLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRG 407
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 798
+GRN + ++PF G R C+G++ A E ++L ++L+ F VE + +ED+ ++ ILRP
Sbjct: 408 SGRN-FHHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHFLVETLT-QEDIKMVYSFILRP 465
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 483 LSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFS 542
+S D+ L +Y +P T V + +Y+L R+A +FPRPE Y+P R+L +GRN + ++PF
Sbjct: 360 VSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRN-FHHVPFG 418
Query: 543 AGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 590
G R C+G++ A E ++L ++L+ F VE + +ED+ ++ ILRP
Sbjct: 419 FGMRQCLGRRLAEAEMLLLLHHVLKHFLVETLT-QEDIKMVYSFILRP 465
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 308 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 367
DTT+ + TL L N ++Q + +E +A A+S+ ++ + L A +KE L
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAA---AASISEHPQKATTELPLLRAALKETL 347
Query: 368 RLYPSVPFIAR 378
RLYP F+ R
Sbjct: 348 RLYPVGLFLER 358
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TT++ + WTL L N +++ K+YEEI S P T N + LEA I+E L
Sbjct: 287 ETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNV--GFSRTP-TISDRNRLLLLEATIREVL 343
Query: 679 RLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL P P I K + D + ++ + + TEVII ++ LH + K + +P+ + P RFL N
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFL--N 401
Query: 738 AAGRN----PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
AG Y+PF AGPR+CIG+ A E +I+A +L+RF +E D + +L G
Sbjct: 402 PAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEG 460
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 150/388 (38%), Gaps = 127/388 (32%)
Query: 241 FSYKVINERKAELKARKNTEDETIEDPTEHVKKRPA--FLDLLIEA---SERHN------ 289
F K + + K+ +K R + ++ +E+ E + LD L++A S+ N
Sbjct: 206 FPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQD 265
Query: 290 ---LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLK 346
L+D +I + G +TT++ + WTL L N +++ K+YEEI S
Sbjct: 266 SELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNV--GFSRT 323
Query: 347 PFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRS 406
P T N + LEA I+E LRL P P +
Sbjct: 324 P-TISDRNRLLLLEATIREVLRLRPVAPML------------------------------ 352
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
I K + D + ++ + + TEVII ++ LH + + +
Sbjct: 353 -----------------------IPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWH 389
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
+P+ + P+RFL+ P T++I P +
Sbjct: 390 QPDQFMPERFLN----------------PAGTQLI--------------SPSV------- 412
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGEL 586
Y+PF AGPR+CIG+ A E +I+A +L+RF +E D +
Sbjct: 413 ----------SYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ-------- 454
Query: 587 ILRPQDGI-RVMFGVDTSRDVAPVSPIW 613
L +GI +V+F +D+ + V W
Sbjct: 455 -LPSLEGIPKVVFLIDSFKVKIKVRQAW 481
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T ++A+ LLLG + +I+ +V +E K + T +L M YL+ ++E
Sbjct: 256 HETLTSALSSFCLLLGQHSDIRERVRQE----QNKLQLSQELTAETLKKMPYLDQVLQEV 311
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL P V R+L +D + P+ V + H D ++P PE +DP RF +
Sbjct: 312 LRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDG 371
Query: 738 AAGRN-PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG---- 792
+A N P+ ++PF G R C+G++FA LE K+ ++++F D TLL
Sbjct: 372 SATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF---------DWTLLPGQNL 422
Query: 793 ELIL----RPQDGIRVRL 806
EL++ RP+D +RV+L
Sbjct: 423 ELVVTPSPRPKDNLRVKL 440
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 122/575 (21%), Positives = 212/575 (36%), Gaps = 178/575 (30%)
Query: 49 PGPTSLPVLGNSIECNVDN------QEVFNRIISSKRLFGHKKGLNRIWLGGT---PYVF 99
PG LP LG ++ D Q+ F I + RLFG N I++ G ++F
Sbjct: 15 PGDFGLPWLGETLNFLNDGDFGKKRQQQFGPIFKT-RLFGK----NVIFISGALANRFLF 69
Query: 100 IHTAENAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRILED 159
E + S I + P N L T G I RRKIL AF R L+
Sbjct: 70 TKEQETFQATWPLSTRI-------LLGP---NALATQMGEIHRSRRKILYQAFLPRTLDS 119
Query: 160 FVEVFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGD---SNSE 216
++ + V +P + T D+ MG K++
Sbjct: 120 YLP---KMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFET 176
Query: 217 YVKAVYEL-----SSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHV 271
Y++ ++ L ++L+ K QR L + K+I R+ + + ++
Sbjct: 177 YIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDA------------ 224
Query: 272 KKRPAFLDLLIEASERHN--LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQN 329
L +L+ A + +N L+ +++++ +F GH+T ++A+ LLLG + +I+
Sbjct: 225 ------LGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRE 278
Query: 330 KVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIV 389
+V +E K + T +L M YL+ ++E LRL P V R+L
Sbjct: 279 RVRQE----QNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFREL--------- 325
Query: 390 ATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDT 449
++ C + +P ++ ++S+
Sbjct: 326 -----------------------IQDCQFQGFH-FPKGWLVSYQISQT------------ 349
Query: 450 EVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHR 509
H DP+++P PE +DP+RF + +
Sbjct: 350 ---------HADPDLYPDPEKFDPERFTPDGS---------------------------- 372
Query: 510 DAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
A P+ ++PF G R C+G++FA LE K+ ++++F
Sbjct: 373 --------------------ATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF 412
Query: 570 RVEAVDRREDLTLLG----ELIL----RPQDGIRV 596
D TLL EL++ RP+D +RV
Sbjct: 413 ---------DWTLLPGQNLELVVTPSPRPKDNLRV 438
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 5/190 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
DTTS + W L + N ++Q+ + E++A +A L + L+A IKE L
Sbjct: 289 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD---MATMLQLVPLLKASIKETL 345
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RL+P + R L D+ L DY++P T V + +Y L R+ F PE +DP R+LS++
Sbjct: 346 RLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD- 404
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 798
+ + F G R C+G++ A LE + L N+L FRVE + D+ LIL P
Sbjct: 405 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMP 463
Query: 799 QDGIRVRLFP 808
+ I +P
Sbjct: 464 EKPISFTFWP 473
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 483 LSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFS 542
L D+ L DY++P T V + +Y L R+ F PE +DP R+LS++ + + F
Sbjct: 358 LVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-KNITYFRNLGFG 416
Query: 543 AGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMF 598
G R C+G++ A LE + L N+L FRVE + D+ LIL P+ I F
Sbjct: 417 WGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMPEKPISFTF 471
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
L+A IKE LRL+P + R L D+ L DY++P T V + +Y L R+P F PE +D
Sbjct: 337 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 396
Query: 473 PDRFLSENAKLS 484
P R+LS++ ++
Sbjct: 397 PTRWLSKDKNIT 408
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 5/190 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
DTTS + W L + N ++Q+ + E++A +A L + L+A IKE L
Sbjct: 286 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD---MATMLQLVPLLKASIKETL 342
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RL+P + R L D+ L DY++P T V + +Y L R+ F PE +DP R+LS++
Sbjct: 343 RLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD- 401
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 798
+ + F G R C+G++ A LE + L N+L FRVE + D+ LIL P
Sbjct: 402 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMP 460
Query: 799 QDGIRVRLFP 808
+ I +P
Sbjct: 461 EKPISFTFWP 470
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 51/186 (27%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
L+A IKE LRL+P + R L D+ L DY++P T V + +Y L R+P F PE +D
Sbjct: 334 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 393
Query: 473 PDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAG 532
P R+LS++ ++
Sbjct: 394 PTRWLSKDKNIT----------------------------------------------YF 407
Query: 533 RNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQD 592
RN + F G R C+G++ A LE + L N+L FRVE + D+ LIL P+
Sbjct: 408 RN----LGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMPEK 462
Query: 593 GIRVMF 598
I F
Sbjct: 463 PISFTF 468
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TT+ ++ W L L N + Q ++ +E+ + P + + L +M YL+AC+KE++
Sbjct: 297 ETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPR---AEDLRNMPYLKACLKESM 353
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RL PSVPF R L + L +Y LP+ T + + L F + P R+L +
Sbjct: 354 RLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK 413
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 798
NP+ ++PF G R CIG++ A L+ + L I++++ + A D E + +L IL P
Sbjct: 414 K-INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATD-NEPVEMLHLGILVP 471
Query: 799 QDGIRVRLFPR 809
+ + PR
Sbjct: 472 SRELPIAFRPR 482
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 51/192 (26%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
L +M YL+AC+KE++RL PSVPF R L + L +Y LP+ T + + L + F
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
+ P+R+L + K+
Sbjct: 399 DSHKFRPERWLQKEKKI------------------------------------------- 415
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGEL 586
NP+ ++PF G R CIG++ A L+ + L I++++ + A D E + +L
Sbjct: 416 -------NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATD-NEPVEMLHLG 467
Query: 587 ILRPQDGIRVMF 598
IL P + + F
Sbjct: 468 ILVPSRELPIAF 479
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 144/359 (40%), Gaps = 38/359 (10%)
Query: 45 INRIPGPTSLPVLGNSIECNVDN--QEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHT 102
+ +PGPT+ P+LG+ +E ++ + + + +G + R+ LG V + +
Sbjct: 23 VTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ---IFRMKLGSFDSVHLGS 79
Query: 103 AENAEPILNNSRTIHKSSDYRYIEPWLGN--------GLLTSAGHIWHQ-----RRKILT 149
E + RT I+PW GL+ G W + ++K++
Sbjct: 80 PSLLEALY---RTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMK 136
Query: 150 PAFHFR-------ILEDFVEVFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETA 202
P + +L DF+E E +N + + ++C ++ E
Sbjct: 137 PVEIMKLDKKINEVLADFLERMDE---LCDERGRIPDLYSELNKWSFESICL--VLYEKR 191
Query: 203 MGRKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLHS-FSYKVINERKAELKARKNTED 261
G + ++ A+ + S + K LH + KV +
Sbjct: 192 FGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVK 251
Query: 262 ETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLL 321
I++ + ++P D L + ++ +L+ + + V +TT+ ++ W L L
Sbjct: 252 PCIDNRLQRYSQQPG-ADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNL 310
Query: 322 GSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
N + Q ++ +E+ + P + + L +M YL+AC+KE++RL PSVPF R L
Sbjct: 311 SRNPQAQRRLLQEVQSVLPDNQTPR---AEDLRNMPYLKACLKESMRLTPSVPFTTRTL 366
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y+EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYMEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P FL+E
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G RNC G+ A +E + +++ FR+++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDI 449
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 454 VVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 513
V++ + R +V P +S ++ +D D+ LP+ TEV ++ ++ RD
Sbjct: 333 VIHEIQRFGDVIP----------MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSF 382
Query: 514 FPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA 573
F P+ ++P FL+E + ++PFS G RNC G+ A +E + +++ FR+++
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS 442
Query: 574 VDRREDL 580
+D+
Sbjct: 443 SQSPKDI 449
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y+EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYMEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P FL+E
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G RNC G+ A +E + +++ FR+++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDI 449
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 454 VVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 513
V++ + R +V P +S ++ +D D+ LP+ TEV ++ ++ RD
Sbjct: 333 VIHEIQRFGDVIP----------MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSF 382
Query: 514 FPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA 573
F P+ ++P FL+E + ++PFS G RNC G+ A +E + +++ FR+++
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS 442
Query: 574 VDRREDL 580
+D+
Sbjct: 443 SQSPKDI 449
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y+EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYMEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P FL+E
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G RNC G+ A +E + +++ FR+++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDI 449
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 454 VVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 513
V++ + R +V P +S ++ +D D+ LP+ TEV ++ ++ RD
Sbjct: 333 VIHEIQRFGDVIP----------MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSF 382
Query: 514 FPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA 573
F P+ ++P FL+E + ++PFS G RNC G+ A +E + +++ FR+++
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS 442
Query: 574 VDRREDL 580
+D+
Sbjct: 443 SQSPKDI 449
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y+EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYMEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P FL+E
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G RNC G+ A +E + +++ FR+++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDI 449
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 454 VVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 513
V++ + R +V P +S ++ +D D+ LP+ TEV ++ ++ RD
Sbjct: 333 VIHEIQRFGDVIP----------MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSF 382
Query: 514 FPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA 573
F P+ ++P FL+E + ++PFS G RNC G+ A +E + +++ FR+++
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS 442
Query: 574 VDRREDL 580
+D+
Sbjct: 443 SQSPKDI 449
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y+EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYMEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P FL+E
Sbjct: 339 RFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G RNC G+ A +E + +++ FR+++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDI 449
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 54/199 (27%)
Query: 383 KVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLP 441
KV+EEI K K M Y+EA I E R +P +AR++ +D
Sbjct: 304 KVHEEIDRVIGKNRQPK----FEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFR 359
Query: 442 DYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVI 501
D+ LP+ TEV ++ ++ RDP F P+ ++P FL+E
Sbjct: 360 DFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--------------------- 398
Query: 502 IVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVI 561
G+F +A ++PFS G RNC G+ A +E +
Sbjct: 399 ---------------------GQFKKSDA-------FVPFSIGKRNCFGEGLARMELFLF 430
Query: 562 LANILRRFRVEAVDRREDL 580
+++ FR+++ +D+
Sbjct: 431 FTTVMQNFRLKSSQSPKDI 449
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + W L + + +Q + EE++ +A ++ L + L+A IKE L
Sbjct: 290 NTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGD---ISKMLQMVPLLKASIKETL 346
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RL+P + R D+ L DY++P T V + +Y + RD F P+ +DP R+LS++
Sbjct: 347 RLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDK 406
Query: 739 ---AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
RN + F G R C+G++ A LE + L +IL F+VE + D+ + LI
Sbjct: 407 DLIHFRN----LGFGWGVRQCVGRRIAELEMTLFLIHILENFKVE-MQHIGDVDTIFNLI 461
Query: 796 LRPQDGI 802
L P I
Sbjct: 462 LTPDKPI 468
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 51/194 (26%)
Query: 405 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEV 464
+ L + L+A IKE LRL+P + R D+ L DY++P T V + +Y + RDP
Sbjct: 330 KMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAF 389
Query: 465 FPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 524
F P+ +DP R+LS++ L I NL
Sbjct: 390 FSSPDKFDPTRWLSKDKDL------------------IHFRNL----------------- 414
Query: 525 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 584
+G+ G R C+G++ A LE + L +IL F+VE + D+ +
Sbjct: 415 ----------GFGW-----GVRQCVGRRIAELEMTLFLIHILENFKVE-MQHIGDVDTIF 458
Query: 585 ELILRPQDGIRVMF 598
LIL P I ++F
Sbjct: 459 NLILTPDKPIFLVF 472
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + KV EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + EV++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/479 (19%), Positives = 170/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S ++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFARDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA--QGDSNSEYVKAVYELSSLYKKHQRC 234
+ V +T TLD + + N+ + + + + L + K QR
Sbjct: 132 RLNADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L D NI ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKVAEEATRVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + EV++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + +TL L N + K EE V P S + + +KY+ +
Sbjct: 272 HETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 325
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 326 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF 385
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 386 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 443
Query: 789 TL 790
TL
Sbjct: 444 TL 445
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 78 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 137
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 138 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRT 197
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 198 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEP 254
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + +TL L N +
Sbjct: 255 LDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHV---------------------- 292
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 293 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 316
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 317 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 349
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 350 ---------------------EYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF--E 386
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 387 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 445
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T ++ I W L L + E +++ +E+ A + +P + +++ I EA+
Sbjct: 277 ETIASTIMWLLQALADHPEHADRIRDEVEAVT----GGRPVAFEDVRKLRHTGNVIVEAM 332
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
RL P+V + R+ + L Y +P ++I Y + RD K + +DP R+L E A
Sbjct: 333 RLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA 392
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 798
A Y PFSAG R C F+M + +I A + ++R E V D +G + LRP
Sbjct: 393 ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVG-ITLRP 451
Query: 799 QD 800
D
Sbjct: 452 HD 453
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 489 LPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNC 548
L Y +P ++I Y + RD K + +DP R+L E AA Y PFSAG R C
Sbjct: 351 LGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKC 410
Query: 549 IGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQD 592
F+M + +I A + ++R E V D +G + LRP D
Sbjct: 411 PSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVG-ITLRPHD 453
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 108/275 (39%), Gaps = 39/275 (14%)
Query: 122 YRYIEPWLGN-GLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXXXXXX 180
+ +E LG G+ T+ G + ++R+ + PAF + + + +E++
Sbjct: 92 WESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKT 151
Query: 181 XXSVNVFPYVTL-----CTL--DIVCETAMGRKINAQGDSNSEYVKAVYELSSLYK---- 229
+ + V + C L + E A + Y + V L LY+
Sbjct: 152 VDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLP 211
Query: 230 ---KHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASE 286
+ L LH ++I ER+A +K L L+EA +
Sbjct: 212 ANRRFNDALADLHLLVDEIIAERRAS------------------GQKPDDLLTALLEAKD 253
Query: 287 RHN--LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASS 344
+ + ++ I ++V + G +T ++ I W L L + E +++ +E+ A +
Sbjct: 254 DNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT----G 309
Query: 345 LKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARK 379
+P + +++ I EA+RL P+V + R+
Sbjct: 310 GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRR 344
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 322
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+VP + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 323 EALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 382
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 383 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 789 TL 790
TL
Sbjct: 441 TL 442
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 75 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 134
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 135 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 194
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 195 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 251
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 289
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 290 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 313
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+VP + ED L
Sbjct: 314 LKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGG--------------------------- 346
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 347 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 383
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 384 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + ++LLLL + E+ +V EEI + S + + M Y +A I E
Sbjct: 279 ETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSP---CMQDRSRMPYTDAVIHEIQ 335
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P + ++ DV +Y +P+ T++I + ++ D K FP P+++DPG FL E+
Sbjct: 336 RFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDES 395
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
+ ++PFSAG R C+G+ A +E + L +IL+ F+++++ +DL +
Sbjct: 396 GNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDI 448
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 63/100 (63%)
Query: 483 LSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFS 542
++ DV +Y +P+ T++I + ++ D K FP P+++DPG FL E+ + ++PFS
Sbjct: 349 VTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFS 408
Query: 543 AGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
AG R C+G+ A +E + L +IL+ F+++++ +DL +
Sbjct: 409 AGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDI 448
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
PGPT P++GN ++ +D +++ + +G + ++LG P V +H E +
Sbjct: 13 PGPTPFPIIGNILQ--IDAKDISKSLTKFSECYG---PVFTVYLGMKPTVVLHGYEAVKE 67
Query: 109 IL 110
L
Sbjct: 68 AL 69
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+T S + + LLL + E++ KV+EEI K K F R+ M Y EA I E
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK-FEDRA--KMPYTEAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P +A ++++D D+ LP+ TEV ++ ++ RD + F P ++P FL +
Sbjct: 339 RFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKK 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFS G R C G+ A +E + I++ FR ++ +D+
Sbjct: 399 GQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDI 449
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 482 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 541
++++D D+ LP+ TEV ++ ++ RD + F P ++P FL + + ++PF
Sbjct: 351 RVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPF 410
Query: 542 SAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 580
S G R C G+ A +E + I++ FR ++ +D+
Sbjct: 411 SIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDI 449
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 616 LRHDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEAC 673
+ H+TTS + + L L N + K EE V P S + + +KY+
Sbjct: 264 MGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMV 317
Query: 674 IKEALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPG 731
+ EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRRE 786
RF EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E
Sbjct: 378 RF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKE 435
Query: 787 DLTL 790
LTL
Sbjct: 436 TLTL 439
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 322
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 323 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 382
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 383 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 789 TL 790
TL
Sbjct: 441 TL 442
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 75 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 134
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 135 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 194
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 195 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 251
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 289
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 290 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 313
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 314 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 346
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 347 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 383
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 384 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ +GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ EGH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 174/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ +GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+G TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ T + GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T++ + +T++ L EI ++ E+ S + L ++YL +KE+
Sbjct: 256 HETSANHLAFTVMELSRQPEIVARLQAEV---DEVIGSKRYLDFEDLGRLQYLSQVLKES 312
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRLYP R L E+ + +P +T ++ Y + R F P ++P RF
Sbjct: 313 LRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF--GP 370
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
A + + Y PFS G R+CIGQ+FA +E KV++A +L+R V + L + L+
Sbjct: 371 GAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR-FGLQEQATLK 429
Query: 798 PQDGIRVRLFPR 809
P D + L PR
Sbjct: 430 PLDPVLCTLRPR 441
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 193/530 (36%), Gaps = 137/530 (25%)
Query: 98 VFIHTAENAEPILNNSRTIHKSSDYR-----YIEPWLGNGLLTSAGH-IWHQRRKILTPA 151
V + + E+ + L +++ S YR + E G GL++ + WH++R+++ A
Sbjct: 37 VIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLA 96
Query: 152 FHFRILEDFVEVFQEQSXXXXXXXXXXXXXXS-VNVFPYVTLCTLDIVCETAMGRKINAQ 210
F L +E F E++ + V++ +T +DI+ + A G + +
Sbjct: 97 FSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSML 156
Query: 211 GDSNSEYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEH 270
+ +AV + + L K + E + ++ + + ++ E
Sbjct: 157 LGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREA 216
Query: 271 VKKR---PAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEI 327
+K+ PA + I +E DE + + TF GH+T++ + +T++ L
Sbjct: 217 LKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQ--- 273
Query: 328 QNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEE 387
EIVA L+A + E + G+K Y +
Sbjct: 274 -----PEIVAR--------------------LQAEVDEVI-------------GSKRYLD 295
Query: 388 IVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPR 447
L ++YL +KE+LRLYP R L E+
Sbjct: 296 F----------------EDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEET--------- 330
Query: 448 DTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNL 507
L D R +P +T ++ Y +
Sbjct: 331 ----------------------LIDGVR------------------VPGNTPLLFSTYVM 350
Query: 508 HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILR 567
R F P ++P RF A + + Y PFS G R+CIGQ+FA +E KV++A +L+
Sbjct: 351 GRMDTYFEDPLTFNPDRF--GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQ 408
Query: 568 RFRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTSRDVAPVSPIWAPLR 617
R E L P G R FG+ + P+ P+ LR
Sbjct: 409 RL---------------EFRLVP--GQR--FGLQEQATLKPLDPVLCTLR 439
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 269 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 322
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 323 EALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 382
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 383 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 789 TL 790
TL
Sbjct: 441 TL 442
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 75 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 134
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 135 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 194
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 195 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 251
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 289
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 290 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 313
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 314 LKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGG--------------------------- 346
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 347 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 383
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 384 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +V +EI S +P M Y +A I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQV---IGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL +PF + +++D YV+P++TEV V+ + D + F P ++PG FL N
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + G++PFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------ 490
+V R + I V HR P + R ++ D + E +L + +P
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
YV+P++TEV V+ + D + F P ++PG FL N A + G++PFS G R C+G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
+ A E + IL+ F + + ED+ L
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI-VATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+TT+ + W +L + IQ +V +EI + P KP + M Y EA + E
Sbjct: 287 ETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG---KP-SWDDKCKMPYTEAVLHEV 342
Query: 678 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSE 736
LR VP I SED + Y +P+ T VI +Y++H D K + PE++ P RFL
Sbjct: 343 LRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS 402
Query: 737 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
+ +PFS G R+C+G+ A +E + +L+RF +
Sbjct: 403 SGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLH 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
SED + Y +P+ T VI +Y++H D K + PE++ P RFL + +PFS
Sbjct: 358 SEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSL 417
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVE 572
G R+C+G+ A +E + +L+RF +
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLH 446
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +V +EI S +P M Y +A I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQV---IGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL +PF + +++D YV+P++TEV V+ + D + F P ++PG FL N
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + G++PFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------ 490
+V R + I V HR P + R ++ D + E +L + +P
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
YV+P++TEV V+ + D + F P ++PG FL N A + G++PFS G R C+G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
+ A E + IL+ F + + ED+ L
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI-VATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+TT+ + W +L + IQ +V +EI + P KP + M Y EA + E
Sbjct: 287 ETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG---KP-SWDDKCKMPYTEAVLHEV 342
Query: 678 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSE 736
LR VP I SED + Y +P+ T VI +Y++H D K + PE++ P RFL
Sbjct: 343 LRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS 402
Query: 737 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
+ +PFS G R+C+G+ A +E + +L+RF +
Sbjct: 403 SGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLH 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
SED + Y +P+ T VI +Y++H D K + PE++ P RFL + +PFS
Sbjct: 358 SEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSL 417
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVE 572
G R+C+G+ A +E + +L+RF +
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLH 446
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + P+ G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + P+ G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALR++P+ P + ED L +Y L + E+++++ LHRD V+ E + P RF
Sbjct: 321 EALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + R IL P + ++ + + + +
Sbjct: 73 SQARKFVRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + +IN+ D ++ + V L + K QR
Sbjct: 133 RLNSDEHIEVPEDMTRLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALR++P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD V+ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D E LTL
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTL 440
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +V +EI S +P M Y +A I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQV---IGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL +PF + +++D YV+P++TEV V+ + D + F P ++PG FL N
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + G++PFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------ 490
+V R + I V HR P + R ++ D + E +L + +P
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
YV+P++TEV V+ + D + F P ++PG FL N A + G++PFS G R C+G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
+ A E + IL+ F + + ED+ L
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +V +EI S +P M Y +A I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQV---IGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL +PF + +++D YV+P++TEV V+ + D + F P ++PG FL N
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + G++PFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------ 490
+V R + I V HR P + R ++ D + E +L + +P
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
YV+P++TEV V+ + D + F P ++PG FL N A + G++PFS G R C+G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
+ A E + IL+ F + + ED+ L
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LLLL + E+ KV EEI + S + + M Y +A + E
Sbjct: 282 ETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSP---CMQDRSHMPYTDAVVHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R VP + ++ D +Y++P+ T ++ ++ ++ D K FP P ++DPG FL +N
Sbjct: 339 RYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFSAG R C G+ A +E + L IL+ F +++VD ++L
Sbjct: 399 GNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNL 449
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 428 PFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDV 487
P + K+ E++ D+V+ R HR P + R + D + E + S+ V
Sbjct: 299 PEVTAKVQEEI---DHVIGR-----------HRSPCMQDRSHMPYTDAVVHEIQRYSDLV 344
Query: 488 P------------LPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNP 535
P +Y++P+ T ++ ++ ++ D K FP P ++DPG FL +N +
Sbjct: 345 PTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKS 404
Query: 536 YGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 580
++PFSAG R C G+ A +E + L IL+ F +++VD ++L
Sbjct: 405 DYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNL 449
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + P+ G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + P+ G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H++TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E E L +
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKET 437
Query: 794 LILRPQ 799
L+L+P+
Sbjct: 438 LLLKPE 443
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/483 (20%), Positives = 176/483 (36%), Gaps = 122/483 (25%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GLLTS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH++TS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
N + + + PF G R CIGQ+FA+ E ++L +L+ F E E L + L+L
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKETLLL 440
Query: 589 RPQ 591
+P+
Sbjct: 441 KPE 443
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H++TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E E L +
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKET 436
Query: 794 LILRPQ 799
L+L+P+
Sbjct: 437 LLLKPE 442
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/483 (20%), Positives = 176/483 (36%), Gaps = 122/483 (25%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GLLTS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH++TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
N + + + PF G R CIGQ+FA+ E ++L +L+ F E E L + L+L
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKETLLL 439
Query: 589 RPQ 591
+P+
Sbjct: 440 KPE 442
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIG++FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 173/479 (36%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIG++FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T ++A+ W+ LLL + Q +V E A A +EA
Sbjct: 223 HETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------AAFQEA 261
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRLYP + R+L + L + LP+ T +++ Y R FP E + P RFL+E
Sbjct: 262 LRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAER 319
Query: 738 AAGRNPYG-YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
P G Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ L
Sbjct: 320 G---TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTL 373
Query: 797 RPQDGIRVR 805
RP+ G+ R
Sbjct: 374 RPEGGLPAR 382
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 529
LY P L+ +L + L + LP+ T +++ Y R FP E + P RFL+E
Sbjct: 264 LYPPAWILTR--RLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAER 319
Query: 530 AAGRNPYG-YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
P G Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ L
Sbjct: 320 G---TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTL 373
Query: 589 RPQDGI 594
RP+ G+
Sbjct: 374 RPEGGL 379
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 94/285 (32%), Gaps = 51/285 (17%)
Query: 96 PYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFR 155
P I E E L T + YR + G GLLT G W + RK L F +
Sbjct: 42 PLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGKSWKEARKALKDPFLPK 101
Query: 156 ILEDFVEVFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGDSNS 215
+ + E +E++ + + +GR + + S S
Sbjct: 102 SVRGYREAMEEEAWAFFGEWRGEERDLDHEML---------ALSLRLLGRALFGKPLSPS 152
Query: 216 EYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRP 275
A+ L + + + L L + + + L + E + P H+ +
Sbjct: 153 LAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALY--REAEALIVHPPLSHLPR-- 208
Query: 276 AFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI 335
E E T + GH+T ++A+ W+ LLL + Q +V E
Sbjct: 209 -----------------ERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE 251
Query: 336 VATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
A A +EALRLYP + R+L
Sbjct: 252 EAAL---------------------AAFQEALRLYPPAWILTRRL 275
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
DT S ++ + L L+ + ++ + +EI + + + +K +E I E++
Sbjct: 309 DTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE----RDIKIDDIQKLKVMENFIYESM 364
Query: 679 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
R P V + RK ED + Y + + T +I+ + +HR + FP+P F EN
Sbjct: 365 RYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKP-----NEFTLENF 418
Query: 739 AGRNPYGYI-PFSAGPRNCIGQKFAMLEEKVILANILRRFR--------VEAVDRREDLT 789
A PY Y PF GPR C G+ AM+ K IL +LRRF VE++ + DL+
Sbjct: 419 AKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLS 478
Query: 790 L-------LGELILRPQDGIR 803
L + E+I P++ R
Sbjct: 479 LHPDETKNMLEMIFTPRNSDR 499
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 471 YDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 530
Y P L L +DV + Y + + T +I+ + +HR + FP+P F EN
Sbjct: 366 YQPVVDLVMRKALEDDV-IDGYPVKKGTNIILNIGRMHR-LEFFPKP-----NEFTLENF 418
Query: 531 AGRNPYGYI-PFSAGPRNCIGQKFAMLEEKVILANILRRFR--------VEAVDRREDLT 581
A PY Y PF GPR C G+ AM+ K IL +LRRF VE++ + DL+
Sbjct: 419 AKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLS 478
Query: 582 L-------LGELILRPQDGIRVM 597
L + E+I P++ R +
Sbjct: 479 LHPDETKNMLEMIFTPRNSDRCL 501
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +V +EI S +P M Y +A I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQV---IGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL +PF + +++D YV+P++TEV V+ + D + F P ++PG FL N
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + G++PFS G R C G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------ 490
+V R + I V HR P + R ++ D + E +L + +P
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
YV+P++TEV V+ + D + F P ++PG FL N A + G++PFS G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAG 419
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
+ A E + IL+ F + + ED+ L
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E E L +
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKET 437
Query: 794 LILRPQ 799
L+L+P+
Sbjct: 438 LVLKPE 443
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/483 (19%), Positives = 174/483 (36%), Gaps = 122/483 (25%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
N + + + PF G R CIGQ+FA+ E ++L +L+ F E E L + L+L
Sbjct: 382 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKETLVL 440
Query: 589 RPQ 591
+P+
Sbjct: 441 KPE 443
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E E L +
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKET 436
Query: 794 LILRPQ 799
L+L+P+
Sbjct: 437 LVLKPE 442
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/483 (19%), Positives = 174/483 (36%), Gaps = 122/483 (25%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+ TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
N + + + PF G R CIGQ+FA+ E ++L +L+ F E E L + L+L
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKETLVL 439
Query: 589 RPQ 591
+P+
Sbjct: 440 KPE 442
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + P G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + P G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R C GQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 73 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 132
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 193 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 249
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 287
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 288 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 311
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 312 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 344
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 345 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 381
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R C GQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 382 NPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R C GQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + PF G R C GQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 620 TTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALR 679
T+S W L ++ +Q K Y E +L P T L + L+ CIKE LR
Sbjct: 267 TSSTTSAWMGFFLARDKTLQKKCYLEQKTVC--GENLPPLTYDQLKDLNLLDRCIKETLR 324
Query: 680 LYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAA 739
L P + + R + Y +P +V + R + ++P R+L +N A
Sbjct: 325 LRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA 384
Query: 740 GRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD 783
+ Y+PF AG CIG+ FA ++ K I + +LR + + +D
Sbjct: 385 SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLID 428
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 49/176 (27%)
Query: 400 PFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLH 459
P T L + L+ CIKE LRL P + + R + Y +P +V +
Sbjct: 302 PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCV------ 355
Query: 460 RDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPEL 519
P V N +L +D+ V + +N
Sbjct: 356 -SPTV---------------NQRL------------KDSWVERLDFN------------- 374
Query: 520 YDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD 575
P R+L +N A + Y+PF AG CIG+ FA ++ K I + +LR + + +D
Sbjct: 375 --PDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLID 428
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 113/304 (37%), Gaps = 42/304 (13%)
Query: 94 GTPYVFIHTAENAEPILNNSRTIHKSSDY--RYIEPWLGNGLLTSAGH-IWHQRRKILTP 150
G + ++ ++ A + N+ + D R P G G+ + ++ +++K+L
Sbjct: 54 GKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKS 113
Query: 151 AFHFRILEDFVEVFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQ 210
+ + V + ++++ NVF ++ + G++I +Q
Sbjct: 114 GLNIAHFKQHVSIIEKETKEYFESWGESGEK---NVFEALSELIILTASHCLHGKEIRSQ 170
Query: 211 ---------GDSNSEYVKAVYELSSL-----YKKHQRCLNTLHSFSYKVINERKAELKAR 256
D + + A + L +++ R + YK I +R+
Sbjct: 171 LNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS---- 226
Query: 257 KNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--LTDENIREEVDTFMFEGHDTTSAAI 314
E I+D L L++A+ + LTD+ + + + G T+S
Sbjct: 227 ----QEKIDD----------ILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTS 272
Query: 315 CWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVP 374
W L ++ +Q K Y E +L P T L + L+ CIKE LRL P +
Sbjct: 273 AWMGFFLARDKTLQKKCYLEQKTVC--GENLPPLTYDQLKDLNLLDRCIKETLRLRPPIM 330
Query: 375 FIAR 378
+ R
Sbjct: 331 IMMR 334
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N K EE V P S + + +KY+ +
Sbjct: 267 HEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSH------KQVKQLKYVGMVLN 320
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD V+ E + P RF
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF 380
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 381 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 789 TL 790
TL
Sbjct: 439 TL 440
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 56/191 (29%)
Query: 398 LKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYN 457
+ P + + + +KY+ + EALRL+P+ P + ED L
Sbjct: 300 VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------- 344
Query: 458 LHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP 517
+Y L + E+++++ LHRD V+
Sbjct: 345 ---------------------------------EYPLEKGDELMVLIPQLHRDKTVWGDD 371
Query: 518 -ELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE---- 572
E + P RF EN + + + PF G R CIGQ+FA+ E ++L +L+ F E
Sbjct: 372 VEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN 429
Query: 573 -AVDRREDLTL 582
+D +E LTL
Sbjct: 430 YELDIKETLTL 440
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 20/263 (7%)
Query: 123 RYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXXXXXX 180
+++ G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 77 KFVRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 181 XXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRCLNTL 238
+ V +T TLD + + N+ D ++ + V L K +R
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDD 196
Query: 239 HSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN---LTDE 293
++ N+R+ ++K + D+ I D ++ L ++ + L DE
Sbjct: 197 PAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDE 253
Query: 294 NIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTR 351
NIR ++ TF+ GH+ TS + + L L N K EE V P S +
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSH------K 307
Query: 352 SLNSMKYLEACIKEALRLYPSVP 374
+ +KY+ + EALRL+P+ P
Sbjct: 308 QVKQLKYVGMVLNEALRLWPTAP 330
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+TTS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + P G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 172/479 (35%), Gaps = 126/479 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH+TTS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDLTL 582
N + + + P G R CIGQ+FA+ E ++L +L+ F E +D +E LTL
Sbjct: 381 NPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H++TS + + L L N + K EE V P S + + +KY+ +
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 167/464 (35%), Gaps = 121/464 (26%)
Query: 119 SSDYRYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXX 176
S +++ + G+GLLTS H W + IL P+F + ++ + + + +
Sbjct: 72 SQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE 131
Query: 177 XXXXXXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRC 234
+ V +T TLD + + N+ D ++ + V L K QR
Sbjct: 132 RLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 191
Query: 235 LNTLHSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--- 289
++ N+R+ ++K + D+ I D ++ L ++ +
Sbjct: 192 NPDDPAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEP 248
Query: 290 LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 349
L DENIR ++ TF+ GH++TS + + L L N +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHV---------------------- 286
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
L+ +EA R+ + P + + +
Sbjct: 287 ---------LQKAAEEAARVL---------------------------VDPVPSYKQVKQ 310
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+KY+ + EALRL+P+ P + ED L
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------------------- 343
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRFLSE 528
+Y L + E+++++ LHRD ++ E + P RF E
Sbjct: 344 ---------------------EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--E 380
Query: 529 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 572
N + + + PF G R CIGQ+FA+ E ++L +L+ F E
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIK 675
H+ TS + + L L N K EE V P S + + +KY+ +
Sbjct: 266 HEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPS------YKQVKQLKYVGMVLN 319
Query: 676 EALRLYPSVPFIARKLSEDVPLP-DYVLPRDTEVIIVVYNLHRDAKVFPRP-ELYDPGRF 733
EALRL+P+ P + ED L +Y L + E+++++ LHRD ++ E + P RF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE-----AVDRREDL 788
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E +D +E L
Sbjct: 380 --ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 789 TL 790
TL
Sbjct: 438 TL 439
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 56/191 (29%)
Query: 398 LKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYN 457
+ P + + + +KY+ + EALRL+P+ P + ED L
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG--------------- 343
Query: 458 LHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP 517
+Y L + E+++++ LHRD ++
Sbjct: 344 ---------------------------------EYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 518 -ELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE---- 572
E + P RF EN + + + PF G R CIGQ+FA+ E ++L +L+ F E
Sbjct: 371 VEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN 428
Query: 573 -AVDRREDLTL 582
+D +E LTL
Sbjct: 429 YELDIKETLTL 439
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 20/263 (7%)
Query: 123 RYIEPWLGNGLLTSAGH--IWHQRRKILTPAFHFRILEDFVEVFQEQSXXXXXXXXXXXX 180
+++ + G+GL TS H W + IL P+F + ++ + + + +
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 181 XXSVNVFPYVTLCTLDIVCETAMGRKINA-QGDSNSEYVKA-VYELSSLYKKHQRCLNTL 238
+ V +T TLD + + N+ D ++ + V L K +R
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDD 195
Query: 239 HSFSYKVINERK--AELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN---LTDE 293
++ N+R+ ++K + D+ I D ++ L ++ + L DE
Sbjct: 196 PAYDE---NKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDE 252
Query: 294 NIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTR 351
NIR ++ TF+ GH+ TS + + L L N K EE V P S +
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPS------YK 306
Query: 352 SLNSMKYLEACIKEALRLYPSVP 374
+ +KY+ + EALRL+P+ P
Sbjct: 307 QVKQLKYVGMVLNEALRLWPTAP 329
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LLLL + E+ KV EEI + S + + M Y +A + E
Sbjct: 281 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP---CMQDRSHMPYTDAVVHEVQ 337
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P + ++ D+ +Y++P+ T ++I + ++ D K FP PE++DP FL E
Sbjct: 338 RYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG 397
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAV 782
+ ++PFSAG R C+G+ A +E + L +IL+ F ++++
Sbjct: 398 GNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSL 442
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 486 DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP 545
D+ +Y++P+ T ++I + ++ D K FP PE++DP FL E + ++PFSAG
Sbjct: 354 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 413
Query: 546 RNCIGQKFAMLEEKVILANILRRFRVEAV 574
R C+G+ A +E + L +IL+ F ++++
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNLKSL 442
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 46 NRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAEN 105
R PGPT LPV+GN ++ + +++ + + +++G + ++ G P V +H E
Sbjct: 9 GRPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYG---PVFTLYFGLKPIVVLHGYEA 63
Query: 106 AEPILNNSRTIHKSSDYRYIEPWL-----GNGLLTSAGHIWHQRRKI 147
+ L + + + R I P G G++ S G W + R+
Sbjct: 64 VKEALID---LGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRF 107
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LLLL + E+ KV EEI + S + + M Y +A + E
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP---CMQDRSHMPYTDAVVHEVQ 339
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P + ++ D+ +Y++P+ T ++I + ++ D K FP PE++DP FL E
Sbjct: 340 RYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG 399
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAV 782
+ ++PFSAG R C+G+ A +E + L +IL+ F ++++
Sbjct: 400 GNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSL 444
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 486 DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP 545
D+ +Y++P+ T ++I + ++ D K FP PE++DP FL E + ++PFSAG
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Query: 546 RNCIGQKFAMLEEKVILANILRRFRVEAV 574
R C+G+ A +E + L +IL+ F ++++
Sbjct: 416 RICVGEALAGMELFLFLTSILQNFNLKSL 444
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
PGPT LPV+GN ++ + +++ + + +++G + ++ G P V +H E +
Sbjct: 14 PGPTPLPVIGNILQIGI--KDISKSLTNLSKVYG---PVFTLYFGLKPIVVLHGYEAVKE 68
Query: 109 ILNNSRTIHKSSDYRYIEPWL-----GNGLLTSAGHIWHQRRKI 147
L + + + R I P G G++ S G W + R+
Sbjct: 69 ALID---LGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRF 109
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T ++A+ W+ LLL + Q +V E A A +EA
Sbjct: 223 HETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------AAFQEA 261
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRLYP + R+L + L + LP T +++ Y R FP E + P RFL E
Sbjct: 262 LRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEER 319
Query: 738 AAGRNPYG-YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
P G Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ L
Sbjct: 320 G---TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTL 373
Query: 797 RPQDGIRVR 805
RP+ G+ R
Sbjct: 374 RPEGGLPAR 382
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 529
LY P L+ +L + L + LP T +++ Y R FP E + P RFL E
Sbjct: 264 LYPPAWILTR--RLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEER 319
Query: 530 AAGRNPYG-YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
P G Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ L
Sbjct: 320 G---TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTL 373
Query: 589 RPQDGI 594
RP+ G+
Sbjct: 374 RPEGGL 379
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 94/285 (32%), Gaps = 51/285 (17%)
Query: 96 PYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFR 155
P I E E L T + YR + G GLLT G W + RK L F +
Sbjct: 42 PLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPK 101
Query: 156 ILEDFVEVFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQGDSNS 215
+ + E +E++ + + +GR + + S S
Sbjct: 102 NVRGYREAMEEEARAFFGEWRGEERDLDHEML---------ALSLRLLGRALFGKPLSPS 152
Query: 216 EYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRP 275
A+ L + + + L L + + + L + E + P H+ +
Sbjct: 153 LAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALY--REAEALIVHPPLSHLPR-- 208
Query: 276 AFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI 335
E E T + GH+T ++A+ W+ LLL + Q +V E
Sbjct: 209 -----------------ERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE 251
Query: 336 VATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
A A +EALRLYP + R+L
Sbjct: 252 EAAL---------------------AAFQEALRLYPPAWILTRRL 275
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LLLL + E+ KV EEI + S + M Y +A + E
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSP---CMQDRGHMPYTDAVVHEVQ 339
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P + ++ DV +Y++P+ T ++ + ++ D K FP PE++DP FL E
Sbjct: 340 RYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEG 399
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
+ ++PFSAG R C+G+ A +E + L IL+ F ++++ +DL
Sbjct: 400 GNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSLIDPKDL 450
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 486 DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP 545
DV +Y++P+ T ++ + ++ D K FP PE++DP FL E + ++PFSAG
Sbjct: 356 DVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGK 415
Query: 546 RNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 580
R C+G+ A +E + L IL+ F ++++ +DL
Sbjct: 416 RICVGEGLARMELFLFLTFILQNFNLKSLIDPKDL 450
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TTS + + LL+ + +VY EI +P M Y EA I E
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVAERVYREIEQV---IGPHRPPELHDRAKMPYTEAVIYEIQ 338
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P + +++ Y++P+DTEV +++ D F +P+ ++P FL N
Sbjct: 339 RFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDAN 398
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
A + +IPFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 399 GALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDL 451
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 459 HRDPEVFPRPELYDPDRFLSENAKLSEDVPLP------------DYVLPRDTEVIIVVYN 506
HR PE+ R ++ + + E + S+ +P+ Y++P+DTEV +++
Sbjct: 316 HRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILST 375
Query: 507 LHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANIL 566
D F +P+ ++P FL N A + +IPFS G R C+G+ A E + IL
Sbjct: 376 ALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTIL 435
Query: 567 RRFRVEAVDRREDLTL 582
+ F + + ED+ L
Sbjct: 436 QNFSMASPVAPEDIDL 451
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 558 EKVILANILRRFRVEAVDRREDLTLLGELILRP-QDGIRVMFGVDTSRDVAPVSPIWAPL 616
+K++ I+ R + EA LLG L+ +DG R+ VA +
Sbjct: 208 QKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFA----- 262
Query: 617 RHDTTSAAICWTLLLLG--SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
T++ W++L L N++ +K+++EI + + ++ M + E C+
Sbjct: 263 GQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YDNVMDEMPFAERCV 317
Query: 675 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
+E++R P + + R + +V + YV+P+ + H D + FP P L+DP R
Sbjct: 318 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 375
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
E G +I F AG CIGQKFA+L+ K ILA R +
Sbjct: 376 DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C++E++R P + + R + +V + YV+P+ + H D E FP
Sbjct: 307 MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFP 366
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P L+DP+ RD KV G F
Sbjct: 367 NPRLWDPE----------------------------------RDEKV--------DGAF- 383
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
I F AG CIGQKFA+L+ K ILA R +
Sbjct: 384 ------------IGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 558 EKVILANILRRFRVEAVDRREDLTLLGELILRP-QDGIRVMFGVDTSRDVAPVSPIWAPL 616
+K++ I+ R + EA LLG L+ +DG R+ VA +
Sbjct: 214 QKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFA----- 268
Query: 617 RHDTTSAAICWTLLLLG--SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
T++ W++L L N++ +K+++EI + + ++ M + E C+
Sbjct: 269 GQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YDNVMDEMPFAERCV 323
Query: 675 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
+E++R P + + R + +V + YV+P+ + H D + FP P L+DP R
Sbjct: 324 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 381
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
E G +I F AG CIGQKFA+L+ K ILA R +
Sbjct: 382 DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C++E++R P + + R + +V + YV+P+ + H D E FP
Sbjct: 313 MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFP 372
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P L+DP+ RD KV G F
Sbjct: 373 NPRLWDPE----------------------------------RDEKV--------DGAF- 389
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
I F AG CIGQKFA+L+ K ILA R +
Sbjct: 390 ------------IGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 558 EKVILANILRRFRVEAVDRREDLTLLGELILRP-QDGIRVMFGVDTSRDVAPVSPIWAPL 616
+K++ I+ R + EA LLG L+ +DG R+ VA +
Sbjct: 223 QKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFA----- 277
Query: 617 RHDTTSAAICWTLLLLG--SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
T++ W++L L N++ +K+++EI + + ++ M + E C+
Sbjct: 278 GQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YDNVMDEMPFAERCV 332
Query: 675 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
+E++R P + + R + +V + YV+P+ + H D + FP P L+DP R
Sbjct: 333 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 390
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
E G +I F AG CIGQKFA+L+ K ILA R +
Sbjct: 391 DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C++E++R P + + R + +V + YV+P+ + H D E FP
Sbjct: 322 MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P L+DP+ RD KV G F
Sbjct: 382 NPRLWDPE----------------------------------RDEKV--------DGAF- 398
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
I F AG CIGQKFA+L+ K ILA R +
Sbjct: 399 ------------IGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIKE 676
+TTS + + LL+L EI+ K++EEI V + ++K M Y++A + E
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIK-----DRQEMPYMDAVVHE 335
Query: 677 ALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
R VP + + + D Y++P+ T V+ + ++ D + FP PE + P FL+
Sbjct: 336 IQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLN 395
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
EN + + PFS G R C G+ A +E ++L IL+ F ++ + +D+ L
Sbjct: 396 ENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDL 450
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ D Y++P+ T V+ + ++ D + FP PE + P FL+EN + + PFS
Sbjct: 352 TRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFST 411
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
G R C G+ A +E ++L IL+ F ++ + +D+ L
Sbjct: 412 GKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDL 450
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 369 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 369 EPRRWDPE----------------------------------RDEKV------------- 381
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 382 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 310 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 369
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 370 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 310 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 369
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 370 EPRRWDPE----------------------------------RDEKV------------- 382
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 383 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 382 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 382 EPRRWDPE----------------------------------RDEKV------------- 394
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 395 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 382 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 382 EPRRWDPE----------------------------------RDEKV------------- 394
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 395 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 369 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 369 EPRRWDPE----------------------------------RDEKV------------- 381
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 382 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D + FP
Sbjct: 308 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 367
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P +DP R E G +I F AG CIGQKF +L+ K ILA R +
Sbjct: 368 EPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 55/163 (33%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
++ M + E C +E++R P + + RK+ DV + YV+P+ + H D E FP
Sbjct: 308 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 367
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P +DP+ RD KV
Sbjct: 368 EPRRWDPE----------------------------------RDEKV------------- 380
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
E A +I F AG CIGQKF +L+ K ILA R +
Sbjct: 381 -EGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEAL 678
+TT++ + W + L + EIQ ++ EE+ +S T + + L A I E L
Sbjct: 293 ETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVL 352
Query: 679 RLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
RL P VP + + + + Y +P VI + H D V+ +P + P RFL
Sbjct: 353 RLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-- 410
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
G NP + F G R C+G+ A LE V+LA +L+ F
Sbjct: 411 -PGANPSA-LAFGCGARVCLGESLARLELFVVLARLLQAF 448
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 492 YVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQ 551
Y +P VI + H D V+ +P + P RFL G NP + F G R C+G+
Sbjct: 375 YDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE---PGANPSA-LAFGCGARVCLGE 430
Query: 552 KFAMLEEKVILANILRRF 569
A LE V+LA +L+ F
Sbjct: 431 SLARLELFVVLARLLQAF 448
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 620 TTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALR 679
TTS + W LLL+ + ++Q +V +EI ++ M Y A I E R
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEI---DDVIGQVRRPEMGDQAHMPYTTAVIHEVQR 343
Query: 680 LYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
VP + S D+ + + +P+ T +I + ++ +D V+ +P + P FL
Sbjct: 344 FGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG 403
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P ++PFSAG R C+G+ A +E + ++L+ F
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
S D+ + + +P+ T +I + ++ +D V+ +P + P FL P ++PFSA
Sbjct: 357 SRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSA 416
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G R C+G+ A +E + ++L+ F
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 620 TTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALR 679
TTS + W LLL+ + ++Q +V +EI ++ M Y A I E R
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEI---DDVIGQVRRPEMGDQAHMPYTTAVIHEVQR 343
Query: 680 LYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 738
VP + S D+ + + +P+ T +I + ++ +D V+ +P + P FL
Sbjct: 344 FGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG 403
Query: 739 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P ++PFSAG R C+G+ A +E + ++L+ F
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
S D+ + + +P+ T +I + ++ +D V+ +P + P FL P ++PFSA
Sbjct: 357 SRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSA 416
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G R C+G+ A +E + ++L+ F
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKP-FTTRSLNSMKYLEACIKEA 677
DT + AI W+L+ L N +Q K+ EE+ + S +P + RS + Y+EA I E
Sbjct: 293 DTVTTAISWSLMYLVMNPRVQRKIQEEL--DTVIGRSRRPRLSDRS--HLPYMEAFILET 348
Query: 678 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSE 736
R VPF I + D L + +P+ V + + ++ D K++ P + P RFL+
Sbjct: 349 FRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTP 408
Query: 737 NAAGRNPYG--YIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
+ A I F G R CIG+ A E + LA +L+R
Sbjct: 409 DGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQR 450
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 111/559 (19%), Positives = 191/559 (34%), Gaps = 161/559 (28%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
PGP P++G+ + + +R+ + +G + +I +G TP V + +
Sbjct: 14 PGPWGWPLIGHMLTLGKNPHLALSRM---SQQYGD---VLQIRIGSTPVVVLSGLDTIRQ 67
Query: 109 ILNNSRTIHKSSDYRYIEPWLGNGLLTS----AGHIWHQRRKILTPAFH-FRILED---- 159
L K Y + NG S +G +W RR++ F I D
Sbjct: 68 ALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASS 127
Query: 160 ---FVE--VFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGRKINAQ---- 210
++E V +E N + YV + +++C GR+ +
Sbjct: 128 TSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQEL 187
Query: 211 --------------GDSN-SEYVKAVYELSSLYKKHQRCLN-TLHSFSYKVINERKAELK 254
G N ++++ + L + + LN +SF K++ E
Sbjct: 188 LSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEH----- 242
Query: 255 ARKNTEDETIEDPT----EHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTT 310
K E I D T EH +++ ++ + L+DE I V G DT
Sbjct: 243 -YKTFEKGHIRDITDSLIEHCQEKQ------LDENANVQLSDEKIINIVLDLFGAGFDTV 295
Query: 311 SAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKP-FTTRSLNSMKYLEACIKEALRL 369
+ AI W+L+ L N +Q K+ EE+ + S +P + RS + Y+EA I E R
Sbjct: 296 TTAISWSLMYLVMNPRVQRKIQEEL--DTVIGRSRRPRLSDRS--HLPYMEAFILETFR- 350
Query: 370 YPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPF 429
SS PFT
Sbjct: 351 -------------------------HSSFVPFT--------------------------- 358
Query: 430 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPL 489
I + D L + +P+ V + + ++ D +++ P + P+RFL+ + +
Sbjct: 359 IPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAI------ 412
Query: 490 PDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCI 549
D VL +E +I+ F G R CI
Sbjct: 413 -DKVL---SEKVII-------------------------------------FGMGKRKCI 431
Query: 550 GQKFAMLEEKVILANILRR 568
G+ A E + LA +L+R
Sbjct: 432 GETIARWEVFLFLAILLQR 450
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 620 TTSAAICWTLLLLGS--NQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
T++ W+LL L N+ K+++EI + + + M + E C +E+
Sbjct: 267 TSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLN-----YDNVMEEMPFAEQCARES 321
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R P + + RK+ + V + YV+P + H+D + FP P ++P R +
Sbjct: 322 IRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLV 381
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGEL 794
+ F AG CIG+KF +L+ K +LA +LR + D LLG L
Sbjct: 382 DG-----AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY---------DFELLGPL 424
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 63/180 (35%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
+ M + E C +E++R P + + RK+ + V + YV+P + H+D E FP
Sbjct: 308 MEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFP 367
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 526
P ++P+R N KL + G F
Sbjct: 368 NPREWNPER----NMKLVD-------------------------------------GAFC 386
Query: 527 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGEL 586
F AG CIG+KF +L+ K +LA +LR + D LLG L
Sbjct: 387 G-------------FGAGVHKCIGEKFGLLQVKTVLATVLRDY---------DFELLGPL 424
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
DT + AI W+L+ L + EIQ K+ +E+ P+ S +P + YLEA
Sbjct: 296 DTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD-RP-------QLPYLEAF 347
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E R +PF I + D L + +P+ V + + ++ D +++ P + P R
Sbjct: 348 ILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 733 FLSENAAGRN---PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
FL+ + N + F G R CIG+ A E + LA +L++
Sbjct: 408 FLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQL 455
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 163/479 (34%), Gaps = 112/479 (23%)
Query: 40 RLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVF 99
R+ K + P P P+LG+ + + +R+ S+R +G + +I +G TP +
Sbjct: 10 RVPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRM--SQR-YG---DVLQIRIGSTPVLV 63
Query: 100 IHTAENAEPILNNSRTIHKSSDYRYIEPWLGNG----LLTSAGHIWHQRRKILTPAFH-F 154
+ + L K Y + +G T +G +W RR++ A + F
Sbjct: 64 LSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTF 123
Query: 155 RILED-------FVE--VFQEQSXXXXXXXXXXXXXXSVNVFPYVTLCTLDIVCETAMGR 205
I D ++E V +E + + V + +++ G+
Sbjct: 124 SIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQ 183
Query: 206 KINAQGDSNSEYVKAVYELSSLYKKHQ--------RCLNTLHSFSYKVINER------KA 251
D VK +E R L +K N+R K
Sbjct: 184 HFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKT 243
Query: 252 ELKARKNTEDETIEDPT----EHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGH 307
+ ++ + ++ D T +H KK P LI E I V+ G
Sbjct: 244 VQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIP--------QEKIVNLVNDIFGAGF 295
Query: 308 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 362
DT + AI W+L+ L + EIQ K+ +E+ P+ S +P + YLEA
Sbjct: 296 DTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD-RP-------QLPYLEAF 347
Query: 363 IKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALR 422
I E R SS PFT
Sbjct: 348 ILETFR--------------------------HSSFLPFT-------------------- 361
Query: 423 LYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENA 481
I + D L + +P+ V + + ++ DPE++ P + P+RFL+ +
Sbjct: 362 -------IPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADG 413
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
I +L + P I RK+ +++ D V+ R+ R P + RP+L +
Sbjct: 300 TAISWSLMYLVTKPEIQRKIQKEL---DTVIGRE-----------RRPRLSDRPQLPYLE 345
Query: 475 RFLSENAKLSE------------DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
F+ E + S D L + +P+ V + + ++ D +++ P + P
Sbjct: 346 AFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRP 405
Query: 523 GRFLSENAAGRN---PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
RFL+ + N + F G R CIG+ A E + LA +L++
Sbjct: 406 ERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQL 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 30/262 (11%)
Query: 569 FRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTSRDVAPVSPIWAPLRHDTTSAAICWT 628
R E + +RE ++ L L + D + ++ ++ V +WA T A W+
Sbjct: 225 LRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVV--LWAS--QANTIPATFWS 280
Query: 629 LLLLGSNQEIQNKVYEEIVATSPKAS---SLKP----FTTRSLNSMKYLEACIKEALRLY 681
L + N E EE+ T A SL+ + LN + L++ IKE+LRL
Sbjct: 281 LFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRL- 339
Query: 682 PSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
S R ED L Y + +D + + +H D +++P P + R+L EN
Sbjct: 340 SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDEN 399
Query: 738 AAGRN---------PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE-- 786
+ Y Y+PF +G C G+ FA+ E K L +L F +E ++ +
Sbjct: 400 GKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKC 459
Query: 787 ---DLTLLGELILRPQDGIRVR 805
D + G IL P + I +
Sbjct: 460 PPLDQSRAGLGILPPLNDIEFK 481
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDP 462
LN + L++ IKE+LRL S R ED L Y + +D + + +H DP
Sbjct: 323 LNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E++P P + DR+L EN K + Y
Sbjct: 382 EIYPDPLTFKYDRYLDENGK--------------------------------TKTTFYCN 409
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
G L Y Y+PF +G C G+ FA+ E K L +L F +E ++
Sbjct: 410 GLKLK--------YYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE------- 454
Query: 583 LGELILRPQDGIRVMFGV 600
G+ P D R G+
Sbjct: 455 -GQAKCPPLDQSRAGLGI 471
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 30/262 (11%)
Query: 569 FRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTSRDVAPVSPIWAPLRHDTTSAAICWT 628
R E + +RE ++ L L + D + ++ ++ V +WA T A W+
Sbjct: 225 LRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVV--LWAS--QANTIPATFWS 280
Query: 629 LLLLGSNQEIQNKVYEEIVATSPKAS---SLKP----FTTRSLNSMKYLEACIKEALRLY 681
L + N E EE+ T A SL+ + LN + L++ IKE+LRL
Sbjct: 281 LFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRL- 339
Query: 682 PSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
S R ED L Y + +D + + +H D +++P P + R+L EN
Sbjct: 340 SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDEN 399
Query: 738 AAGRN---------PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE-- 786
+ Y Y+PF +G C G+ FA+ E K L +L F +E ++ +
Sbjct: 400 GKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKC 459
Query: 787 ---DLTLLGELILRPQDGIRVR 805
D + G IL P + I +
Sbjct: 460 PPLDQSRAGLGILPPLNDIEFK 481
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 407 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDP 462
LN + L++ IKE+LRL S R ED L Y + +D + + +H DP
Sbjct: 323 LNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E++P P + DR+L EN K + Y
Sbjct: 382 EIYPDPLTFKYDRYLDENGK--------------------------------TKTTFYCN 409
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
G L Y Y+PF +G C G+ FA+ E K L +L F +E ++
Sbjct: 410 GLKLK--------YYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE------- 454
Query: 583 LGELILRPQDGIRVMFGV 600
G+ P D R G+
Sbjct: 455 -GQAKCPPLDQSRAGLGI 471
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H T+S WTL+ L +++ V +E+ S+ + +L + LE +KE
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLENVLKET 314
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + + R + + + + V +R + FP P + P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 738 AAGR-NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 301 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE 360
+ MF GH T+S WTL+ L +++ V +E+ S+ + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLE 308
Query: 361 ACIKEALRLYPSVPFIARKL-------GNKVYE-EIVATSSKASSLKP--FTTIRSLNSM 410
+KE LRL+P + + R G++++E ++VA S S+ P F
Sbjct: 309 NVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPA 368
Query: 411 KYLEACIKEALRLYPSVPFIARK 433
+Y + ++ L + +PF A +
Sbjct: 369 RYEQPRQEDLLNRWTWIPFGAGR 391
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 48/170 (28%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ +L + LE +KE LRL+P + + R + + + + V +R P
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E FP P + P R Y PR +++
Sbjct: 357 EDFPDPHDFVPAR----------------YEQPRQEDLL--------------------- 379
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 572
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 380 -----------NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H T+S WTL+ L +++ V +E+ S+ + +L + LE +KE
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLENVLKET 314
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + + R + + + + V +R + FP P + P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 738 AAGR-NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 301 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE 360
+ MF GH T+S WTL+ L +++ V +E+ S+ + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLE 308
Query: 361 ACIKEALRLYPSVPFIARKL-------GNKVYE-EIVATSSKASSLKP--FTTIRSLNSM 410
+KE LRL+P + + R G++++E ++VA S S+ P F
Sbjct: 309 NVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPA 368
Query: 411 KYLEACIKEALRLYPSVPFIARK 433
+Y + ++ L + +PF A +
Sbjct: 369 RYEQPRQEDLLNRWTWIPFGAGR 391
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 48/170 (28%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ +L + LE +KE LRL+P + + R + + + + V +R P
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E FP P + P R Y PR +++
Sbjct: 357 EDFPDPHDFVPAR----------------YEQPRQEDLL--------------------- 379
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 572
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 380 -----------NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H T+S WTL+ L +++ V +E+ S+ + +L + LE +KE
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLENVLKET 314
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + + R + + + + V +R + FP P + P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 738 AAGR-NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 301 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE 360
+ MF GH T+S WTL+ L +++ V +E+ S+ + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLE 308
Query: 361 ACIKEALRLYPSVPFIARKL-------GNKVYE-EIVATSSKASSLKP--FTTIRSLNSM 410
+KE LRL+P + + R G++++E ++VA S S+ P F
Sbjct: 309 NVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPA 368
Query: 411 KYLEACIKEALRLYPSVPFIARK 433
+Y + ++ L + +PF A +
Sbjct: 369 RYEQPRQEDLLNRWTWIPFGAGR 391
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 48/170 (28%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ +L + LE +KE LRL+P + + R + + + + V +R P
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E FP P + P R Y PR +++
Sbjct: 357 EDFPDPHDFVPAR----------------YEQPRQEDLL--------------------- 379
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 572
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 380 -----------NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H T+S WTL+ L +++ V +E+ S+ + +L + LE +KE
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLENVLKET 314
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + + R + + + + V +R + FP P + P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 738 AAGR-NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 780
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 301 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE 360
+ MF GH T+S WTL+ L +++ V +E+ S+ + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSV---SFHALRQIPQLE 308
Query: 361 ACIKEALRLYPSVPFIARKL-------GNKVYE-EIVATSSKASSLKP--FTTIRSLNSM 410
+KE LRL+P + + R G++++E ++VA S S+ P F
Sbjct: 309 NVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPA 368
Query: 411 KYLEACIKEALRLYPSVPFIARK 433
+Y + ++ L + +PF A +
Sbjct: 369 RYEQPRQEDLLNRWTWIPFGAGR 391
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 48/170 (28%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ +L + LE +KE LRL+P + + R + + + + V +R P
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
E FP P + P R Y PR +++
Sbjct: 357 EDFPDPHDFVPAR----------------YEQPRQEDLL--------------------- 379
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVE 572
N + +IPF AG C+G FA+++ K I + +LR + E
Sbjct: 380 -----------NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT S A+ W LLL ++Q +V E+ + P N + Y+ A + EA
Sbjct: 292 QDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR--DRLPCMGDQPN-LPYVLAFLYEA 348
Query: 678 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSE 736
+R VP I + + + Y +P+DT V + ++++ D +P PE +DP RFL +
Sbjct: 349 MRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDK 408
Query: 737 NAAGRNPYG--YIPFSAGPRNCIGQKFAMLE 765
+ + FS G R CIG++ + ++
Sbjct: 409 DGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 439
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 409 SMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPR 467
++ Y+ A + EA+R VP I + + + Y +P+DT V + ++++ DP +P
Sbjct: 337 NLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPN 396
Query: 468 PELYDPDRFLSENAKLSEDV 487
PE +DP RFL ++ +++D+
Sbjct: 397 PENFDPARFLDKDGLINKDL 416
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 409 SMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 468
S L ++ L L+ P + ++ ++ D V+ RD R P + +P
Sbjct: 291 SQDTLSTALQWLLLLFTRYPDVQTRVQAEL---DQVVGRD-----------RLPCMGDQP 336
Query: 469 ELYDPDRFLSENAKLSEDVPLP------------DYVLPRDTEVIIVVYNLHRDAKVFPR 516
L FL E + S VP+ Y +P+DT V + ++++ D +P
Sbjct: 337 NLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPN 396
Query: 517 PELYDPGRFLSENAAGRNPYG--YIPFSAGPRNCIGQKFAMLE 557
PE +DP RFL ++ + FS G R CIG++ + ++
Sbjct: 397 PENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 439
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 673 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E LR P V I R+LS+D + + +DT V ++ +RD + F +P++++ R
Sbjct: 305 AIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 733 -FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR 778
L +A ++ F +G NC+G FA E +++ +L + R
Sbjct: 365 EDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMR 411
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 84/291 (28%)
Query: 313 AICWTLLLLGSNQEIQNKVYE---------EIVATSPKASSLKPFTTRSLNSMKYLEACI 363
A+C T+ +LG ++ K+ E ++ SP+A + + + L+ +YL I
Sbjct: 172 AVCVTMDMLGLDKRDHEKISEWHSGVADFITSISQSPEARAHSLWCSEQLS--QYLMPVI 229
Query: 364 KEALRLYPSVPFIA---------RKLGNK-----VYEEIVATSSKASSLKPFTTIRSLNS 409
KE R+ P I+ L +K + ++A + A LN+
Sbjct: 230 KER-RVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNN 288
Query: 410 MKYLEA----------CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLH 459
+ + I E LR P V I R+LS+D + + +DT V ++ +
Sbjct: 289 PEQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAAN 348
Query: 460 RDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPEL 519
RDPE F +P+ V+N+HR+
Sbjct: 349 RDPEAFEQPD----------------------------------VFNIHRE--------- 365
Query: 520 YDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR 570
D G + + A R ++ F +G NC+G FA E +++ +L + R
Sbjct: 366 -DLGIKSAFSGAAR----HLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMR 411
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 629 LLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE-----ACIKEALRLYPS 683
LL++ N+ N + ++++ FT NS Y+ ++EALR P
Sbjct: 206 LLMIAGNETTTNLI----------GNAIEDFTL--YNSWDYVREKGALKAVEEALRFSPP 253
Query: 684 VPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNP 743
V R E V + D V+ V + + + +RD +VF P+ + P R P
Sbjct: 254 VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR---------TP 304
Query: 744 YGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
++ F +G C+G A LE ++ L ++FRV+ + ++E +
Sbjct: 305 NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKI 349
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V + D V+ V + + + +RD +VF P+ + P R P ++ F +G
Sbjct: 263 EKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR---------TPNPHLSFGSG 313
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 580
C+G A LE ++ L ++FRV+ + ++E +
Sbjct: 314 IHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKI 349
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 395 ASSLKPFTTIRSLNSMKYLEA--CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
++++ FT S + ++ A ++EALR P V R E V + D V+ V
Sbjct: 220 GNAIEDFTLYNSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVR 279
Query: 453 IVVYNLHRDPEVFPRPELYDPDR 475
+ + + +RD EVF P+ + PDR
Sbjct: 280 VWIASANRDEEVFKDPDSFIPDR 302
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
YL+A I+EALR P V RK E V L D + V + + + +RD +VF +
Sbjct: 240 YLKA-IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-----H 293
Query: 729 DPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-VEAVD 783
D +F+ + RNP ++ F +G C+G A LE ++ + +RFR +E +D
Sbjct: 294 DGEKFIPD----RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 482 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 541
K E V L D + V + + + +RD +VF +D +F+ + RNP ++ F
Sbjct: 260 KTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-----HDGEKFIPD----RNPNPHLSF 310
Query: 542 SAGPRNCIGQKFAMLEEKVILANILRRFR-VEAVD 575
+G C+G A LE ++ + +RFR +E +D
Sbjct: 311 GSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 412 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 471
YL+A I+EALR P V RK E V L D + V + + + +RD EVF E +
Sbjct: 240 YLKA-IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 472 DPDR 475
PDR
Sbjct: 299 IPDR 302
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
YL+A I+EALR P V RK E V L D + V + + + +RD +VF +
Sbjct: 240 YLKA-IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-----H 293
Query: 729 DPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-VEAVD 783
D +F+ + RNP ++ F +G C+G A LE ++ + +RFR +E +D
Sbjct: 294 DGEKFIPD----RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 482 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 541
K E V L D + V + + + +RD +VF +D +F+ + RNP ++ F
Sbjct: 260 KTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-----HDGEKFIPD----RNPNPHLSF 310
Query: 542 SAGPRNCIGQKFAMLEEKVILANILRRFR-VEAVD 575
+G C+G A LE ++ + +RFR +E +D
Sbjct: 311 GSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 412 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 471
YL+A I+EALR P V RK E V L D + V + + + +RD EVF E +
Sbjct: 240 YLKA-IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 472 DPDR 475
PDR
Sbjct: 299 IPDR 302
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 624 AICWTLLLLGSNQEIQNKVYEEIVA---TSPKASSLKPFTTRSLNSMKYLEACIKEALRL 680
A C LLL+ ++ N + +A T + ++L +R+ A I+E +R
Sbjct: 248 ATC-NLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRA-------SAVIEETMRY 299
Query: 681 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAG 740
P V ++R +D+ + + +P+ +++++ HRD + P+ +DP R
Sbjct: 300 DPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIR---- 355
Query: 741 RNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ F G C+G A LE V L + RF
Sbjct: 356 -----HLGFGKGAHFCLGAPLARLEATVALPALAARF 387
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
A I+E +R P V ++R +D+ + + +P+ +++++ HRDP + P+ +DPD
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPD 350
Query: 475 R 475
R
Sbjct: 351 R 351
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 471 YDPD-RFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 529
YDP + +S A +D+ + + +P+ +++++ HRD + P+ +DP R
Sbjct: 299 YDPPVQLVSRYA--GDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIR- 355
Query: 530 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
++ F G C+G A LE V L + RF
Sbjct: 356 --------HLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 629 LLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIA 688
LL++G N+ N + I + +++K ++E LR Y + F+
Sbjct: 184 LLIIGGNETTTNLIGNMIRVIDENPDIID-------DALKNRSGFVEETLRYYSPIQFLP 236
Query: 689 RKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYI 747
+ + ED + + + + +VI+ + + +RD F P+L+ GR ++
Sbjct: 237 HRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR----------REMHL 286
Query: 748 PFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
F G C+G A LE + L +IL F+ +D ++ L +++L
Sbjct: 287 AFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVL 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 471 YDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENA 530
Y P +FL +ED + + + + +VI+ + + +RD F P+L+ GR
Sbjct: 229 YSPIQFLPHRFA-AEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR------ 281
Query: 531 AGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 588
++ F G C+G A LE + L +IL F+ +D ++ L +++L
Sbjct: 282 ----REMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVL 335
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 408 NSMKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFP 466
+++K ++E LR Y + F+ + + ED + + + + +VI+ + + +RD F
Sbjct: 213 DALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFD 272
Query: 467 RPELY 471
P+L+
Sbjct: 273 EPDLF 277
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 672 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
A ++E LR P P + R ++ + +P D V V + +RD+ P+ +DP
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 335
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRED 787
R A + +G+ G C+G A LE +V L I+ RF VDR ++
Sbjct: 336 R--KSGGAAQLSFGH-----GVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDE 384
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 494 LPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKF 553
+P D V V + +RD+ P+ +DP R A + +G+ G C+G
Sbjct: 306 IPADVMVNTWVLSANRDSDAHDDPDRFDPSR--KSGGAAQLSFGH-----GVHFCLGAPL 358
Query: 554 AMLEEKVILANILRRFRVEAVDRRED 579
A LE +V L I+ RF VDR ++
Sbjct: 359 ARLENRVALEEIIARFGRLTVDRDDE 384
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
A ++E LR P P + R ++ + +P D V V + +RD + P+ +DP
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 335
Query: 475 RFLSENAKLS 484
R A+LS
Sbjct: 336 RKSGGAAQLS 345
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 672 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
A ++E LR P P + R ++ + +P D V V + +RD+ P+ +DP
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 355
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRED 787
R A + +G+ G C+G A LE +V L I+ RF VDR ++
Sbjct: 356 R--KSGGAAQLSFGH-----GVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDE 404
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 494 LPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKF 553
+P D V V + +RD+ P+ +DP R A + +G+ G C+G
Sbjct: 326 IPADVMVNTWVLSANRDSDAHDDPDRFDPSR--KSGGAAQLSFGH-----GVHFCLGAPL 378
Query: 554 AMLEEKVILANILRRFRVEAVDRRED 579
A LE +V L I+ RF VDR ++
Sbjct: 379 ARLENRVALEEIIARFGRLTVDRDDE 404
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
A ++E LR P P + R ++ + +P D V V + +RD + P+ +DP
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 355
Query: 475 RFLSENAKLS 484
R A+LS
Sbjct: 356 RKSGGAAQLS 365
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 607 APVSPIWAPLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKA----SSLKPFTTR 662
A V +WA A W LL L N E V E+ + +A S +
Sbjct: 254 ALVLQLWAT--QGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 663 SLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NLH 716
L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 312 VLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQ 370
Query: 717 RDAKVFPRPELYDPGRFLSENAA--------GRNPYGY-IPFSAGPRNCIGQKFAMLEEK 767
RD +++ PE++ RFL+ + + G+ Y +P+ AG +C+G+ +A+ K
Sbjct: 371 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 430
Query: 768 VILANILRRFRVEAVDR-----REDLTLLGELILRPQDGIRVR 805
+ +L +E ++ DL+ G +++P+ + VR
Sbjct: 431 QFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVR 473
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 92/207 (44%), Gaps = 52/207 (25%)
Query: 405 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NL 458
+ L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 311 KVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 459 HRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPE 518
RDPE++ PE++ +RFL+ + +D ++D K
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKD--------------------FYKDGK------ 403
Query: 519 LYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDR-- 576
R + N +P+ AG +C+G+ +A+ K + +L +E ++
Sbjct: 404 -----RLKNYN---------MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV 449
Query: 577 ---REDLTLLGELILRPQDGIRVMFGV 600
DL+ G +++P+ + V + +
Sbjct: 450 EIPEFDLSRYGFGLMQPEHDVPVRYRI 476
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 607 APVSPIWAPLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTT----R 662
A V +WA A W LL L N E V E+ + +A TT +
Sbjct: 266 ALVLQLWA--TQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323
Query: 663 SLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NLH 716
L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 324 VLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQ 382
Query: 717 RDAKVFPRPELYDPGRFLSENAA--------GRNPYGY-IPFSAGPRNCIGQKFAMLEEK 767
RD +++ PE++ RFL+ + + G+ Y +P+ AG +C+G+ +A+ K
Sbjct: 383 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 442
Query: 768 VILANILRRFRVEAVDR-----REDLTLLGELILRPQDGIRVR 805
+ +L +E ++ DL+ G +++P+ + VR
Sbjct: 443 QFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVR 485
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 52/205 (25%)
Query: 405 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NL 458
+ L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 323 KVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 381
Query: 459 HRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPE 518
RDPE++ PE++ +RFL+ + +D ++D K
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKD--------------------FYKDGK------ 415
Query: 519 LYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDR-- 576
R + N +P+ AG +C+G+ +A+ K + +L +E ++
Sbjct: 416 -----RLKNYN---------MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV 461
Query: 577 ---REDLTLLGELILRPQDGIRVMF 598
DL+ G +++P+ + V +
Sbjct: 462 EIPEFDLSRYGFGLMQPEHDVPVRY 486
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+TT AI LG+ IQ+ +++ P A S ++E
Sbjct: 245 HETTVNAIA-----LGALTLIQHPEQIDVLLRDPGAVS----------------GVVEEL 283
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR I R ED+ + + V++ + ++RDAK + P+++D
Sbjct: 284 LRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD-------- 335
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
A RN ++ F G C+GQ A E ++ L + R
Sbjct: 336 -ARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFARI 374
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ + + V++ + ++RDAK + P+++D A RN ++ F G
Sbjct: 299 EDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD---------ARRNARHHVGFGHG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
C+GQ A E ++ L + R
Sbjct: 350 IHQCLGQNLARAELEIALGGLFARI 374
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 20/121 (16%)
Query: 375 FIARKL--GNKVYEEIVA-----------TSSKASSLKPFTTIRSLNSMKYL-------E 414
IAR+L G+ ++E+V T+ A +L T I+ + L
Sbjct: 218 LIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVS 277
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
++E LR I R ED+ + + V++ + ++RD + + P+++D
Sbjct: 278 GVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDAR 337
Query: 475 R 475
R
Sbjct: 338 R 338
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 672 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
A ++E +R P V + R ED+ L D+ +PR + V+ ++ + +RD FP P++ D
Sbjct: 289 AAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVH 348
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANIL 774
R AA R + F G C+G A E ++ L +L
Sbjct: 349 R-----AAERQ----VGFGLGIHYCLGATLARAEAEIGLRALL 382
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
A ++E +R P V + R ED+ L D+ +PR + V+ ++ + +RDP FP P++ D
Sbjct: 289 AAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVH 348
Query: 475 R 475
R
Sbjct: 349 R 349
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ L D+ +PR + V+ ++ + +RD FP P++ D R AA R + F G
Sbjct: 310 EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHR-----AAERQ----VGFGLG 360
Query: 545 PRNCIGQKFAMLEEKVILANIL 566
C+G A E ++ L +L
Sbjct: 361 IHYCLGATLARAEAEIGLRALL 382
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 673 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+EA+R V R + +V L V+ +V++ + + +RD + + P+LYD R
Sbjct: 285 AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR 344
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD----RREDL 788
S G++ F +G C+GQ A LE +V+L+ + R+ +D RR +
Sbjct: 345 KTS---------GHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNN 395
Query: 789 TLLG 792
TL G
Sbjct: 396 TLRG 399
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ +V L V+ +V++ + + +RD + + P+LYD R S G++ F +
Sbjct: 304 TREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTS---------GHVGFGS 354
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVD----RREDLTLLG 584
G C+GQ A LE +V+L+ + R+ +D RR + TL G
Sbjct: 355 GVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRG 399
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 416 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
+EA+R V R + +V L V+ +V++ + + +RDP + P+LYD R
Sbjct: 285 AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR 344
Query: 476 FLSENAKLSEDV 487
S + V
Sbjct: 345 KTSGHVGFGSGV 356
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 673 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
++E LR AR SED+ + + + +V +++ +RD +F P+++D
Sbjct: 270 AVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD--- 326
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
R+P ++ F G C+G A LE ++ + +L+R
Sbjct: 327 ------ITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
SED+ + + + +V +++ +RD +F P+++D R+P ++ F
Sbjct: 289 SEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD---------ITRSPNPHLSFGH 339
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G A LE ++ + +L+R
Sbjct: 340 GHHVCLGSSLARLEAQIAINTLLQRM 365
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 416 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++E LR AR SED+ + + + +V +++ +RDP +F P+++D R
Sbjct: 270 AVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR 329
Query: 476 FLSENAKLS 484
S N LS
Sbjct: 330 --SPNPHLS 336
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 333 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 388
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 389 -QDLSIDFARLPALPKSGFVMR 409
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 254 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVV 313
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 314 LDLYGSNHDAATWADPQEFRPERF 337
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 333 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 388
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 389 -QDLSIDFARLPALPKSGFVMR 409
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 254 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVV 313
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 314 LDLYGSNHDAATWADPQEFRPERF 337
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 325 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 380
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 381 -QDLSIDFARLPALPKSGFVMR 401
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 246 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVV 305
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 306 LDLYGSNHDAATWADPQEFRPERF 329
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 325 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 380
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 381 -QDLSIDFARLPALPKSGFVMR 401
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 246 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVV 305
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 306 LDLYGSNHDAATWADPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 325 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 380
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 381 -QDLSIDFARLPALPKSGFVMR 401
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 246 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVV 305
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 306 LDLYGSNHDAATWADPQEFRPERF 329
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 667 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP 725
M L+ ++E LR V + E V L V+P V++V+ + HR + FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 726 ELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRR 785
+D R+ G++ F G CIG A LE ++ + +L R A+D
Sbjct: 353 HRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALD-- 401
Query: 786 EDLTLLGELILRPQDGIR 803
GEL+ P IR
Sbjct: 402 ---VSPGELVWYPNPMIR 416
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V L V+P V++V+ + HR + FP P +D R+ G++ F G
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD---------IRRDTAGHLAFGHG 370
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
CIG A LE ++ + +L R A+D GEL+ P IR
Sbjct: 371 IHFCIGAPLARLEARIAVRALLERCPDLALD-----VSPGELVWYPNPMIR 416
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 410 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 468
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 469 ELYD 472
+D
Sbjct: 353 HRFD 356
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 667 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP 725
M L+ ++E LR V + E V L V+P V++V+ + HR + FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 726 ELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRR 785
+D R+ G++ F G CIG A LE ++ + +L R A+D
Sbjct: 353 HRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALD-- 401
Query: 786 EDLTLLGELILRPQDGIR 803
GEL+ P IR
Sbjct: 402 ---VSPGELVWYPNPMIR 416
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V L V+P V++V+ + HR + FP P +D R+ G++ F G
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD---------IRRDTAGHLAFGHG 370
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
CIG A LE ++ + +L R A+D GEL+ P IR
Sbjct: 371 IHFCIGAPLARLEARIAVRALLERCPDLALD-----VSPGELVWYPNPMIR 416
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 410 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 468
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 469 ELYD 472
+D
Sbjct: 353 HRFD 356
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 384
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 385 VWRRSLLLRGIDHLPVRL 402
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD K FP P +D R+ G++ F
Sbjct: 296 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD---------VTRDTRGHLSFGQ 346
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 347 GIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 669 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
Y E ++E R YP P + + S+D P +V++ +Y + DA + P+ +
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 729 DPGRFLSENAAGRNPYGYIPFSAG----PRNCIGQKFAMLEEKVILANILRRFRVEAVDR 784
P RF A + + +IP G C G+ + KV ++ R + D
Sbjct: 333 RPERF---RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPD- 388
Query: 785 REDLTL-LGELILRPQDGIRVR 805
+DL++ L P+ G +R
Sbjct: 389 -QDLSIDFARLPALPKSGFVMR 409
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 395 ASSLKPFTTIRS--LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVI 452
A +L+ + IR+ + Y E ++E R YP P + + S+D P +V+
Sbjct: 254 AHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVV 313
Query: 453 IVVYNLHRDPEVFPRPELYDPDRF 476
+ +Y + D + P+ + P+RF
Sbjct: 314 LDLYGSNHDAATWADPQEFRPERF 337
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 383
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 384 VWRRSLLLRGIDHLPVRL 401
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD K FP P +D R+ G++ F
Sbjct: 295 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD---------VTRDTRGHLSFGQ 345
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 346 GIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 667 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRP 725
M L+ ++E LR V + E V L V+P V++V+ + HR + FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 726 ELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRR 785
+D R+ G++ F G CIG A LE ++ + +L R A+D
Sbjct: 353 HRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALD-- 401
Query: 786 EDLTLLGELILRPQDGIR 803
GEL+ P IR
Sbjct: 402 ---VSPGELVWYPNPMIR 416
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V L V+P V++V+ + HR + FP P +D R+ G++ F G
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD---------IRRDTAGHLAFGHG 370
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
CIG A LE ++ + +L R A+D GEL+ P IR
Sbjct: 371 IHFCIGAPLARLEARIAVRALLERCPDLALD-----VSPGELVWYPNPMIR 416
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 410 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 468
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 469 ELYD 472
+D
Sbjct: 353 HRFD 356
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 383
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 384 VWRRSLLLRGIDHLPVRL 401
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD K FP P +D R+ G++ F
Sbjct: 295 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD---------VTRDTRGHLSFGQ 345
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 346 GIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 384
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 385 VWRRSLLLRGIDHLPVRL 402
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD K FP P +D R+ G++ F
Sbjct: 296 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD---------VTRDTRGHLSFGQ 346
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 347 GIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 384
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 385 VWRRSLLLRGIDHLPVRL 402
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD K FP P +D R+ G++ F
Sbjct: 296 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD---------VTRDTRGHLSFGQ 346
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 347 GIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 13/141 (9%)
Query: 630 LLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 689
+L+G N+ ++ + + A + L S + ++ ++E LR + R
Sbjct: 251 VLIGGNETTRHAITGAVHALATVPGLLTALRDGSAD----VDTVVEEVLRWTSPAMHVLR 306
Query: 690 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 749
+ DV + LP T V+ + +RD F P+ + P GR P +I F
Sbjct: 307 VTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLP---------GRKPNRHITF 357
Query: 750 SAGPRNCIGQKFAMLEEKVIL 770
G +C+G A +E V+L
Sbjct: 358 GHGMHHCLGSALARIELSVVL 378
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ DV + LP T V+ + +RD F P+ + PGR P +I F
Sbjct: 309 TADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR---------KPNRHITFGH 359
Query: 544 GPRNCIGQKFAMLEEKVIL 562
G +C+G A +E V+L
Sbjct: 360 GMHHCLGSALARIELSVVL 378
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 38/95 (40%)
Query: 381 GNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL 440
GN+ + + A + P + ++ ++E LR + R + DV +
Sbjct: 255 GNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTI 314
Query: 441 PDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
LP T V+ + +RDP F P+ + P R
Sbjct: 315 NGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 673 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+EA+R V R + DV L + +V++ + + +RD + + P+ YD R
Sbjct: 287 AFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR 346
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
S G++ F +G C+GQ A LE +V+LA + R+
Sbjct: 347 KTS---------GHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 28/134 (20%)
Query: 451 VIIVVYNLHRDPEVFPRPELYDPDRFLSENA----------------KLSEDVPLPDYVL 494
+ VY L R P+ F R D L+ NA + DV L +
Sbjct: 260 IAAAVYCLARFPDEFAR---LRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATI 316
Query: 495 PRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFA 554
+V++ + + +RD + + P+ YD R S G++ F +G C+GQ A
Sbjct: 317 GEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS---------GHVGFGSGVHMCVGQLVA 367
Query: 555 MLEEKVILANILRR 568
LE +V+LA + R+
Sbjct: 368 RLEGEVVLAALARK 381
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 670 LEACIKEALRLYP---SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPE 726
+ A + E LR+ S+P R +ED+ L +P D VI ++ + D + F PE
Sbjct: 282 MPAAVDELLRVLSVADSIPL--RVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 727 LYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
D R + + A +GY G C+GQ A LE +V L +LRR
Sbjct: 340 RVDFHRTDNHHVA----FGY-----GVHQCVGQHLARLELEVALETLLRR 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ED+ L +P D VI ++ + D + F PE D R + + A +GY
Sbjct: 305 AEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTDNHHVA----FGY----- 355
Query: 544 GPRNCIGQKFAMLEEKVILANILRR 568
G C+GQ A LE +V L +LRR
Sbjct: 356 GVHQCVGQHLARLELEVALETLLRR 380
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 413 LEACIKEALRLYP---SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+ A + E LR+ S+P R +ED+ L +P D VI ++ + DPE F PE
Sbjct: 282 MPAAVDELLRVLSVADSIPL--RVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 470 LYD 472
D
Sbjct: 340 RVD 342
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L I+E LR V + R L+ D L +++++ + + D VF PE +D
Sbjct: 263 LPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFD 322
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
RNP ++ F G C+G + A LE ++ +LRR
Sbjct: 323 ---------VQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRL 361
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 483 LSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFS 542
L+ D L +++++ + + D VF PE +D RNP ++ F
Sbjct: 284 LTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFD---------VQRNPNSHLAFG 334
Query: 543 AGPRNCIGQKFAMLEEKVILANILRRF 569
G C+G + A LE ++ +LRR
Sbjct: 335 FGTHFCLGNQLARLELSLMTERVLRRL 361
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 621 TSAAICWTL-LLLGSNQE-----IQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
T A I TL L++ + E I N V ++T P+ +L L+ A +
Sbjct: 228 TDAEIVSTLQLMVAAGHETTISLIVNAVVN--LSTHPEQRAL------VLSGEAEWSAVV 279
Query: 675 KEALRL-YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVF-PRPELYDPGR 732
+E LR P+ + R +EDVP+ D V+P +I+ L RD + P + +D
Sbjct: 280 EETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFD--- 336
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
L+ + R +I F GP C G + +E V L + RF
Sbjct: 337 -LTRTSGNR----HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVF-PRPELYDPGRFLSENAAGRNPYGYIPFS 542
+EDVP+ D V+P +I+ L RD + P + +D L+ + R +I F
Sbjct: 298 AEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFD----LTRTSGNR----HISFG 349
Query: 543 AGPRNCIGQKFAMLEEKVILANILRRF 569
GP C G + +E V L + RF
Sbjct: 350 HGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR R +E+V + +P+ + V++ +RD FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD 332
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVD-RREDL 788
R+ G++ F G C+G+ A LE +V L + RF ++ +D+
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDV 383
Query: 789 TLLGELILRPQDGIRVRL 806
L+LR D + VRL
Sbjct: 384 VWRRSLLLRGIDHLPVRL 401
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+E+V + +P+ + V++ +RD FP P +D R+ G++ F
Sbjct: 295 AEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD---------VTRDTRGHLSFGQ 345
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G C+G+ A LE +V L + RF
Sbjct: 346 GIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
L+ + + ++E LRL V +AR + DV + D +P V+++ + +RD + +
Sbjct: 276 LDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY- 334
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
G +E R P + FS G +C+G A ++ +V L +L R
Sbjct: 335 -------GPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
L+ + + ++E LRL V +AR + DV + D +P V+++ + +RD + +
Sbjct: 276 LDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY- 334
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
G +E R P + FS G +C+G A ++ +V L +L R
Sbjct: 335 -------GPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 723
L+ + + ++E LRL V +AR + DV + D +P V+++ + +RD + +
Sbjct: 277 LDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY- 335
Query: 724 RPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
G +E R P + FS G +C+G A ++ +V L +L R
Sbjct: 336 -------GPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 381
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 404 IRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 463
+RS NS + E ++E R YP PF+ + +D + + T V++ +Y + DP
Sbjct: 268 LRSGNS-REREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPR 326
Query: 464 VFPRPELYDPDRFLSENAKLSEDVP 488
++ P+ + P+RF L + +P
Sbjct: 327 LWDHPDEFRPERFAEREENLFDMIP 351
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 662 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 721
RS NS + E ++E R YP PF+ + +D + + T V++ +Y + D ++
Sbjct: 269 RSGNS-REREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRL 327
Query: 722 FPRPELYDPGRFLSENAAGRNPYGYIPFSAG 752
+ P+ + P RF N + IP G
Sbjct: 328 WDHPDEFRPERFAERE---ENLFDMIPQGGG 355
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 629 LLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIA 688
LL++G N +N + ++A +E + E +R + +
Sbjct: 261 LLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP----ALVETMVPEIIRWQTPLAHMR 316
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R D L + + +V++ Y+ +RD +V RPE + R P ++
Sbjct: 317 RTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHLS 368
Query: 749 FSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAV 782
F G C+G + A ++ +++ IL RF R+E +
Sbjct: 369 FGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVM 403
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 486 DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP 545
D L + + +V++ Y+ +RD +V RPE + R P ++ F G
Sbjct: 322 DSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHLSFGFGI 373
Query: 546 RNCIGQKFAMLEEKVILANILRRF-RVEAV 574
C+G + A ++ +++ IL RF R+E +
Sbjct: 374 HRCVGNRLAEMQLRILWEEILTRFSRIEVM 403
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
+E + E +R + + R D L + + +V++ Y+ +RD EV RPE +
Sbjct: 298 VETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFI 357
Query: 473 PDR 475
DR
Sbjct: 358 IDR 360
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 634 SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSE 693
+ ++ N++ EEI S S+ T ++ M+ ++ + E LR P V + +
Sbjct: 313 AGHQVHNRLAEEI--RSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKK 370
Query: 694 DVPLPDYVLPRDTEVIIVVYNLH----RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 749
D+ + + + ++Y RD K+F R + + P RF+ E G ++ +
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE--GEKLLRHVLW 428
Query: 750 SAGP---------RNCIGQKFAMLEEKVILANILRRF 777
S GP + C G+ F +L ++ + I RR+
Sbjct: 429 SNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 509 RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP---------RNCIGQKFAMLEEK 559
RD K+F R + + P RF+ E G ++ +S GP + C G+ F +L +
Sbjct: 398 RDPKIFDRADEFVPERFVGEE--GEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVAR 455
Query: 560 VILANILRRF 569
+ + I RR+
Sbjct: 456 LFVIEIFRRY 465
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 377 ARKLGNKVYEEIVAT-SSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLS 435
++ N++ EEI + S L T+ ++ M+ ++ + E LR P V +
Sbjct: 314 GHQVHNRLAEEIRSVIKSNGGEL----TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK 369
Query: 436 EDVPLPDYVLPRDTEVIIVVYNLH----RDPEVFPRPELYDPDRFLSENAK 482
+D+ + + + ++Y RDP++F R + + P+RF+ E +
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE 420
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 634 SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSE 693
+ ++ N++ EEI S S+ T ++ M+ ++ + E LR P V + +
Sbjct: 313 AGHQVHNRLAEEI--RSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKK 370
Query: 694 DVPLPDYVLPRDTEVIIVVYNLH----RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 749
D+ + + + ++Y RD K+F R + + P RF+ E G ++ +
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE--GEKLLRHVLW 428
Query: 750 SAGP---------RNCIGQKFAMLEEKVILANILRRF 777
S GP + C G+ F +L ++ + I RR+
Sbjct: 429 SNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 509 RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP---------RNCIGQKFAMLEEK 559
RD K+F R + + P RF+ E G ++ +S GP + C G+ F +L +
Sbjct: 398 RDPKIFDRADEFVPERFVGEE--GEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVAR 455
Query: 560 VILANILRRF 569
+ + I RR+
Sbjct: 456 LFVIEIFRRY 465
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 377 ARKLGNKVYEEIVAT-SSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLS 435
++ N++ EEI + S L T+ ++ M+ ++ + E LR P V +
Sbjct: 314 GHQVHNRLAEEIRSVIKSNGGEL----TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK 369
Query: 436 EDVPLPDYVLPRDTEVIIVVYNLH----RDPEVFPRPELYDPDRFLSENAK 482
+D+ + + + ++Y RDP++F R + + P+RF+ E +
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE 420
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 672 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
A I E +R+ P R +EDV + ++ + + ++ +RD +VF P+++D
Sbjct: 268 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 327
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVE 780
R AA RN + F GP +C GQ + E + A + R+ R+E
Sbjct: 328 R---PPAASRN----LSFGLGPHSCAGQIISRAEATTVFAVLAERYERIE 370
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+EDV + ++ + + ++ +RD +VF P+++D R AA RN + F
Sbjct: 288 TEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN----LSFGL 340
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF-RVE 572
GP +C GQ + E + A + R+ R+E
Sbjct: 341 GPHSCAGQIISRAEATTVFAVLAERYERIE 370
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 380 LGNKVYEEIVATSSKASSLKP--FTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSED 437
+G+ ++A+ + + +P FT R+ S + A I E +R+ P R +ED
Sbjct: 233 VGHMAIGYLIASGIELFARRPEVFTAFRNDESAR--AAIINEMVRMDPPQLSFLRFPTED 290
Query: 438 VPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLS 484
V + ++ + + ++ +RDPEVF P+++D R + + LS
Sbjct: 291 VEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASRNLS 337
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 672 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
A I E +R+ P R +EDV + ++ + + ++ +RD +VF P+++D
Sbjct: 266 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 325
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVE 780
R AA RN + F GP +C GQ + E + A + R+ R+E
Sbjct: 326 R---PPAASRN----LSFGLGPHSCAGQIISRAEATTVFAVLAERYERIE 368
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+EDV + ++ + + ++ +RD +VF P+++D R AA RN + F
Sbjct: 286 TEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN----LSFGL 338
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF-RVE 572
GP +C GQ + E + A + R+ R+E
Sbjct: 339 GPHSCAGQIISRAEATTVFAVLAERYERIE 368
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 380 LGNKVYEEIVATSSKASSLKP--FTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSED 437
+G+ ++A+ + + +P FT R+ S + A I E +R+ P R +ED
Sbjct: 231 VGHMAIGYLIASGIELFARRPEVFTAFRNDESAR--AAIINEMVRMDPPQLSFLRFPTED 288
Query: 438 VPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLS 484
V + ++ + + ++ +RDPEVF P+++D R + + LS
Sbjct: 289 VEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASRNLS 335
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 673 CIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
++E LR P++P A R +ED + +P T V + + HRD +VF D
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADAD 343
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
RF + + I F GP C+G A LE +A + R
Sbjct: 344 RF---DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRL 386
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 416 CIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
++E LR P++P A R +ED + +P T V + + HRDP VF D D
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADAD 343
Query: 475 RF 476
RF
Sbjct: 344 RF 345
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ED + +P T V + + HRD +VF D RF + + I F
Sbjct: 309 AEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADADRF---DITVKREAPSIAFGG 360
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGV 600
GP C+G A LE +A + R + ++T EL + D + + FG
Sbjct: 361 GPHFCLGTALARLELTEAVAALATRLDPPQI--AGEITWRHELGVAGPDALPLRFGA 415
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 673 CIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
++E LR P++P A R +ED + +P T V + + HRD +VF D
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADAD 333
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
RF + + I F GP C+G A LE +A + R
Sbjct: 334 RF---DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRL 376
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 416 CIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
++E LR P++P A R +ED + +P T V + + HRDP VF D D
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADAD 333
Query: 475 RF 476
RF
Sbjct: 334 RF 335
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ED + +P T V + + HRD +VF D RF + + I F
Sbjct: 299 AEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADADRF---DITVKREAPSIAFGG 350
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGV 600
GP C+G A LE +A + R + ++T EL + D + + FG
Sbjct: 351 GPHFCLGTALARLELTEAVAALATRLDPPQI--AGEITWRHELGVAGPDALPLRFGA 405
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 628 TLLLLG-SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPF 686
TL +G + + + ++ EEI + K+ T ++ M ++ + E+LR+ P VP
Sbjct: 288 TLKWIGLAGENLHTQLAEEIRG-AIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPP 346
Query: 687 IARKLSEDVPLPDYVLPRDTEVIIVVYNLH----RDAKVFPRPELYDPGRFLSENAAGRN 742
K + + + + + +++ +D KVF RPE Y P RF+ + G
Sbjct: 347 QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD---GEA 403
Query: 743 PYGYIPFSAGP---------RNCIGQKFAMLEEKVILANILRRF 777
Y+ +S GP + C G+ F +L ++ + + RR+
Sbjct: 404 LLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY 447
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 509 RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP---------RNCIGQKFAMLEEK 559
+D KVF RPE Y P RF+ + G Y+ +S GP + C G+ F +L +
Sbjct: 381 KDPKVFDRPEEYVPDRFVGD---GEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITR 437
Query: 560 VILANILRRF 569
+ + + RR+
Sbjct: 438 LFVIELFRRY 447
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLH--- 459
T+ ++ M ++ + E+LR+ P VP K + + + + + +++
Sbjct: 320 TLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFA 379
Query: 460 -RDPEVFPRPELYDPDRFLSENAKL 483
+DP+VF RPE Y PDRF+ + L
Sbjct: 380 TKDPKVFDRPEEYVPDRFVGDGEAL 404
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L I+E LR V + R L+ D L +++++ + + D VF D
Sbjct: 266 LPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFG-----D 320
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P F + RNP ++ F G C+G + A LE +++ +LRR
Sbjct: 321 PDNFRID----RNPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRL 364
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 533 RNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
RNP ++ F G C+G + A LE +++ +LRR
Sbjct: 328 RNPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRL 364
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 674 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
+ EA+R V R D + + R +++ + +RD +VF P+ +D RF
Sbjct: 304 VDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF 363
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR 778
P ++ F G C+GQ A LE K+ +L + +
Sbjct: 364 ---------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 496 RDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAM 555
R +++ + +RD +VF P+ +D RF P ++ F G C+GQ A
Sbjct: 334 RGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFGWGAHMCLGQHLAK 384
Query: 556 LEEKVILANILRRFR 570
LE K+ +L + +
Sbjct: 385 LEMKIFFEELLPKLK 399
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 673 CIKEALRLYPSVPFIARKL-SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
++E LR + + +L +EDV + + VI+ + + + D VF P + D
Sbjct: 281 AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLD-- 338
Query: 732 RFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
R ++ F GP C+GQ A +E +++ + RR
Sbjct: 339 -------VERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRI 377
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+EDV + + VI+ + + + D VF P + D R ++ F
Sbjct: 301 TEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLD---------VERGARHHLAFGF 351
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
GP C+GQ A +E +++ + RR
Sbjct: 352 GPHQCLGQNLARMELQIVFDTLFRRI 377
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPL-----PDYVLPRDTEVIIVVY-NLHRDAKVFP 723
++ + E LRL + I R +++D + +Y L R + + + + D ++
Sbjct: 312 FDSVLWETLRL-TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQ 370
Query: 724 RPELYDPGRFLSEN---------AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANIL 774
+PE++ RFL+ + R Y +P+ C G+ FA+ K ++ IL
Sbjct: 371 QPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTIL 430
Query: 775 RRFRVEAVDRREDLTLL-----GELILRPQDGIRVR 805
RF VE D+ + L+ G IL+P + +R
Sbjct: 431 TRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIR 466
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 510 DAKVFPRPELYDPGRFLSEN---------AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKV 560
D ++ +PE++ RFL+ + R Y +P+ C G+ FA+ K
Sbjct: 365 DPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKE 424
Query: 561 ILANILRRFRVEAVDRREDLTLL-----GELILRPQDGIRVMFGV 600
++ IL RF VE D+ + L+ G IL+P + + + +
Sbjct: 425 LVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRI 469
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 624 AICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPS 683
C ++L G + I + ++A + F ++ + ++ I+ Y
Sbjct: 228 GFCVQVMLAGDDN-ISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSP 286
Query: 684 VPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNP 743
P IAR ED+ L + + VI + +RD + P + D R P
Sbjct: 287 TPRIAR---EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLD---------VTREP 334
Query: 744 YGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ F G +C+G A LE + + + RRF
Sbjct: 335 IPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ L + + VI + +RD + P + D R P ++ F G
Sbjct: 293 EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLD---------VTREPIPHVAFGHG 343
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
+C+G A LE + + + RRF
Sbjct: 344 VHHCLGAALARLELRTVFTELWRRF 368
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 361 ACIKEALRLYPSVPFIARKL--GNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIK 418
A + A+ P+ P + R L G ++ V + A S +P R + + +
Sbjct: 202 AVTEAAVAALPADPAL-RALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAAQRTVA 260
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLS 478
E LRL+P++ R + +V L ++V+ EV++VV +RDPEVF P+ D DR +
Sbjct: 261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA 320
Query: 479 ENA 481
+ A
Sbjct: 321 DRA 323
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 631 LLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARK 690
L + N V + ++A S + R + + + E LRL+P++ R
Sbjct: 220 LFAGAEMTANTVVDAVLAVSAEPG----LAERIADDPAAAQRTVAEVLRLHPALHLERRT 275
Query: 691 LSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
+ +V L ++V+ EV++VV +RD +VF P+ D
Sbjct: 276 ATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLD 314
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 500 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 559
V +++ + RD VF RP+++D R S + A + GP C G A LE +
Sbjct: 326 VFLLIPSALRDGTVFSRPDVFDVRRDTSASLA---------YGRGPHVCPGVSLARLEAE 376
Query: 560 VILANILRRF 569
+ + I RRF
Sbjct: 377 IAVGTIFRRF 386
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 708 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 767
V +++ + RD VF RP+++D R S + A + GP C G A LE +
Sbjct: 326 VFLLIPSALRDGTVFSRPDVFDVRRDTSASLA---------YGRGPHVCPGVSLARLEAE 376
Query: 768 VILANILRRF 777
+ + I RRF
Sbjct: 377 IAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 500 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 559
V +++ + RD VF RP+++D R S + A + GP C G A LE +
Sbjct: 326 VFLLIPSALRDGTVFSRPDVFDVRRDTSASLA---------YGRGPHVCPGVSLARLEAE 376
Query: 560 VILANILRRF 569
+ + I RRF
Sbjct: 377 IAVGTIFRRF 386
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 708 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 767
V +++ + RD VF RP+++D R S + A + GP C G A LE +
Sbjct: 326 VFLLIPSALRDGTVFSRPDVFDVRRDTSASLA---------YGRGPHVCPGVSLARLEAE 376
Query: 768 VILANILRRF 777
+ + I RRF
Sbjct: 377 IAVGTIFRRF 386
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 38/223 (17%)
Query: 574 VDRREDLTLLGELILRPQDGIRVMFGVDTSRDVAPVSPIWAPLRHDTTSAAICWTLLLLG 633
V+ +DLT L+ DG R+ +SR++A + ++TT AI +L L
Sbjct: 239 VNHHDDLT--SSLVEAEVDGERL-----SSREIASFFILLVVAGNETTRNAITHGVLALS 291
Query: 634 SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSE 693
E +++ + + +P A ++E +R V ++ R L++
Sbjct: 292 RYPEQRDRWWSDFDGLAPTA--------------------VEEIVRWASPVVYMRRTLTQ 331
Query: 694 DVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP 753
D+ L + +V + + +RD F P +D RNP ++ F G
Sbjct: 332 DIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFD---------LARNPNPHLGFGGGG 382
Query: 754 RN-CIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
+ C+G A E +V + LRR + V E LL + I
Sbjct: 383 AHFCLGANLARREIRVAF-DELRRQMPDVVATEEPARLLSQFI 424
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR PSV R+L DV L L RD V+++ +RD + + RP+ +D
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFA 762
R+P + F AG R C+G A
Sbjct: 326 ---------IERDPVPSMSFGAGMRYCLGSYLA 349
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
L ++E LR PSV R+L DV L L RD V+++ +RDP + RP+ +D
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 473 PDR 475
+R
Sbjct: 326 IER 328
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 38/192 (19%)
Query: 602 TSRDVAPVSPIWAPLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTT 661
+ RD A I A HDTTSA+ L L + ++ +V +
Sbjct: 275 SDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD---------------- 318
Query: 662 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV 721
R+L L ++EA+R V R + D L + +++ + D
Sbjct: 319 RNL-----LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQ 373
Query: 722 FPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA 781
FP P +DP R A R ++ F AG C+G A LE +V+L +L
Sbjct: 374 FPEPRKFDPTR-----PANR----HLAFGAGSHQCLGLHLARLEMRVLLDVLL------- 417
Query: 782 VDRREDLTLLGE 793
DR + L L GE
Sbjct: 418 -DRVDSLELAGE 428
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 673 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 730
I E LR P + ++R EDV + + V + +RD +VFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 731 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 458 LHRDPEVFPRP--EL--YDPDRFLSENAKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDAK 512
L +PE+ PR EL + P R ++++ EDV + + V + +RD +
Sbjct: 267 LRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPE 326
Query: 513 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
VFP DP R E R+P ++ F GP C G A LE ++++ +L R
Sbjct: 327 VFP-----DPDRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R + DV L + + +V+ V D PE +D R P ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 749 FSAGPRNCIGQKFAMLEEKVILANILRRF 777
F G CIGQ+ A +E +++ + RR
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRRL 369
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ DV L + + +V+ V D PE +D R P ++ F
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGF 343
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G CIGQ+ A +E +++ + RR
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R + DV L + + +V+ V D PE +D R P ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 749 FSAGPRNCIGQKFAMLEEKVILANILRRF 777
F G CIGQ+ A +E +++ + RR
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRRL 369
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ DV L + + +V+ V D PE +D R P ++ F
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGF 343
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF 569
G CIGQ+ A +E +++ + RR
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 16/111 (14%)
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R + DV L + + +V+ V D PE +D R P ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 749 FSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 792
F G CIGQ+ A +E +++ + RR VE + R D+ G
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYG 391
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 16/108 (14%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ DV L + + +V+ V D PE +D R P ++ F
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGF 343
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
G CIGQ+ A +E +++ + RR VE + R D+ G
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYG 391
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 672 ACIKEALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
++E LR Y ++ IA R + D+ + ++ VI+V +RD V+ P+ D
Sbjct: 279 GAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R+ ++ F G C+GQ A LE +VIL ++ R
Sbjct: 338 ---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 494 LPRDTEVIIVVYNL-HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQK 552
L R E +IVV ++ +RD V+ P+ D R+ ++ F G C+GQ
Sbjct: 309 LIRAGEGVIVVNSIANRDGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQN 359
Query: 553 FAMLEEKVILANILRR 568
A LE +VIL ++ R
Sbjct: 360 LARLELEVILNALMDR 375
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 672 ACIKEALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
++E LR Y ++ IA R + D+ + ++ VI+V +RD V+ P+ D
Sbjct: 279 GAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R+ ++ F G C+GQ A LE +VIL ++ R
Sbjct: 338 ---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 494 LPRDTEVIIVVYNL-HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQK 552
L R E +IVV ++ +RD V+ P+ D R+ ++ F G C+GQ
Sbjct: 309 LIRAGEGVIVVNSIANRDGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQN 359
Query: 553 FAMLEEKVILANILRR 568
A LE +VIL ++ R
Sbjct: 360 LARLELEVILNALMDR 375
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 672 ACIKEALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
++E LR Y ++ IA R + D+ + ++ VI+V +RD V+ P+ D
Sbjct: 279 GAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R+ ++ F G C+GQ A LE +VIL ++ R
Sbjct: 338 ---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 494 LPRDTEVIIVVYNL-HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQK 552
L R E +IVV ++ +RD V+ P+ D R+ ++ F G C+GQ
Sbjct: 309 LIRAGEGVIVVNSIANRDGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQN 359
Query: 553 FAMLEEKVILANILRR 568
A LE +VIL ++ R
Sbjct: 360 LARLELEVILNALMDR 375
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 672 ACIKEALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
++E LR Y ++ IA R + D+ + ++ VI+V +RD V+ P+ D
Sbjct: 279 GAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 776
R+ ++ F G C+GQ A LE +VIL ++ R
Sbjct: 338 ---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 494 LPRDTEVIIVVYNL-HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQK 552
L R E +IVV ++ +RD V+ P+ D R+ ++ F G C+GQ
Sbjct: 309 LIRAGEGVIVVNSIANRDGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQN 359
Query: 553 FAMLEEKVILANILRR 568
A LE +VIL ++ R
Sbjct: 360 LARLELEVILNALMDR 375
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + +V I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 221 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 277
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + +V I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 278 -ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 332
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 333 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 296 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 348
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2KC5|A Chain A, Solution Structure Of Hybe From Escherichia Coli
Length = 162
Score = 34.3 bits (77), Expect = 0.27, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 24/121 (19%)
Query: 644 EEIVA--TSPKA---SSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP 698
EEI TSPKA ++ + RS++ + +L +PS+P V +
Sbjct: 3 EEIAGFQTSPKAQVQAAFEEIARRSMHDLSFL----------HPSMP---------VYVS 43
Query: 699 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 758
D+ L V+ A +FP P+ P R +SE + PYG + F+ G + +
Sbjct: 44 DFTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVS 103
Query: 759 Q 759
Q
Sbjct: 104 Q 104
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R +EDV +P V++ + +RDA P P+ D R+ G +
Sbjct: 289 RFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD---------ITRDASGGVF 339
Query: 749 FSAGPRNCIGQKFAMLEEKVILANIL 774
F G C+G + A LE +V + +
Sbjct: 340 FGHGIHFCLGAQLARLEGRVAIGRLF 365
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+EDV +P V++ + +RDA P P+ D R+ G + F
Sbjct: 292 AEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD---------ITRDASGGVFFGH 342
Query: 544 GPRNCIGQKFAMLEEKVILANIL 566
G C+G + A LE +V + +
Sbjct: 343 GIHFCLGAQLARLEGRVAIGRLF 365
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 689 RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 748
R +EDV +P V++ + +RDA P P+ D R+ G +
Sbjct: 289 RFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD---------ITRDASGGVF 339
Query: 749 FSAGPRNCIGQKFAMLEEKVILANIL 774
F G C+G + A LE +V + +
Sbjct: 340 FGHGIHFCLGAQLARLEGRVAIGRLF 365
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+EDV +P V++ + +RDA P P+ D R+ G + F
Sbjct: 292 AEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD---------ITRDASGGVFFGH 342
Query: 544 GPRNCIGQKFAMLEEKVILANIL 566
G C+G + A LE +V + +
Sbjct: 343 GIHFCLGAQLARLEGRVAIGRLF 365
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 221 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 277
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 278 -ELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 332
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 333 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 296 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 348
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLY-PSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + S I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 221 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 277
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 278 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 332
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 333 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 296 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 348
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 687 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGY 746
I R EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G
Sbjct: 291 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG- 345
Query: 747 IPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
F G CI + A E + + + ++F
Sbjct: 346 --FGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 297 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 350 DHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 221 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 277
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 278 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 332
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 333 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 296 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 348
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 615 PLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 674
P D + A LLL+ N + N + + + L + +++E
Sbjct: 220 PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVE--- 276
Query: 675 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++
Sbjct: 277 -ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN---- 331
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
++ ++P G F G CI + A E + + + ++F
Sbjct: 332 MNRKWPPQDPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 687 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGY 746
I R EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG- 343
Query: 747 IPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
F G CI + A E + + + ++F
Sbjct: 344 --FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ ++ ++P G F G
Sbjct: 295 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFN----MNRKWPPQDPLG---FGFG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
CI + A E + + + ++F
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1FEW|A Chain A, Crystal Structure Of SmacDIABLO
Length = 184
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 215 SEYVKAVYELSSLYKKHQRCLNTLHSFS----YKVINERKAELKAR 256
+EY KAVY L+SLY+++ L ++S ++VI +AE+ ++
Sbjct: 46 TEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSK 91
>pdb|1G73|A Chain A, Crystal Structure Of Smac Bound To Xiap-Bir3 Domain
pdb|1G73|B Chain B, Crystal Structure Of Smac Bound To Xiap-Bir3 Domain
Length = 162
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 215 SEYVKAVYELSSLYKKHQRCLNTLHSFS----YKVINERKAELKAR 256
+EY KAVY L+SLY+++ L ++S ++VI +AE+ ++
Sbjct: 46 TEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSK 91
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 664 LNSMKYLEACIKEALRLYP-----SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRD 718
L+ + + + ++E R P +VP R EDV L + V+ +RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAVP---RYAVEDVTLRGVTIRAGEPVLASTGAANRD 337
Query: 719 AKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
FP + D R P ++ F G +C+G A +E +V L +L+R
Sbjct: 338 QAQFPDADRID---------VDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV L + V+ +RD FP + D R P ++ F G
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID---------VDRTPNQHLGFGHG 362
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
+C+G A +E +V L +L+R
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRL 387
>pdb|4CTS|A Chain A, Crystal Structure Analysis And Molecular Model Of A
Complex Of Citrate Synthase With Oxaloacetate And
S-Acetonyl- Coenzyme A
pdb|4CTS|B Chain B, Crystal Structure Analysis And Molecular Model Of A
Complex Of Citrate Synthase With Oxaloacetate And
S-Acetonyl- Coenzyme A
pdb|1CTS|A Chain A, Crystallographic Refinement And Atomic Models Of Two
Different Forms Of Citrate Synthase At 2.7 And 1.7
Angstroms Resolution
pdb|3ENJ|A Chain A, Structure Of Pig Heart Citrate Synthase At 1.78 A
Resolution
Length = 437
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 352 SLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEE---IVATSSKASSLKPFTTIRSLN 408
++ KY E ++ + L +P +A K+ +Y E I A SK FT N
Sbjct: 161 GIHRTKYWELIYEDCMDLIAKLPCVAAKIYRNLYREGSSIGAIDSKLDWSHNFT-----N 215
Query: 409 SMKYLEACIKEALRLYPSV 427
+ Y +A E +RLY ++
Sbjct: 216 MLGYTDAQFTELMRLYLTI 234
>pdb|2CTS|A Chain A, Crystallographic Refinement And Atomic Models Of Two
Different Forms Of Citrate Synthase At 2.7 And 1.7
Angstroms Resolution
Length = 437
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 352 SLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEE---IVATSSKASSLKPFTTIRSLN 408
++ KY E ++ + L +P +A K+ +Y E I A SK FT N
Sbjct: 161 GIHRTKYWELIYEDCMDLIAKLPCVAAKIYRNLYREGSSIGAIDSKLDWSHNFT-----N 215
Query: 409 SMKYLEACIKEALRLYPSV 427
+ Y +A E +RLY ++
Sbjct: 216 MLGYTDAQFTELMRLYLTI 234
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV L + V+ +RD FP + D R P ++ F G
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID---------VDRTPNQHLGFGHG 362
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
+C+G A +E +V L +L+R
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRL 387
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 693 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 752
EDV L + V+ +RD FP + D R P ++ F G
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID---------VDRTPNQHLGFGHG 362
Query: 753 PRNCIGQKFAMLEEKVILANILRRF 777
+C+G A +E +V L +L+R
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV L + V+ +RD FP + D R P ++ F G
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID---------VDRTPNQHLGFGHG 362
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
+C+G A +E +V L +L+R
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRL 387
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 693 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 752
EDV L + V+ +RD FP + D R P ++ F G
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID---------VDRTPNQHLGFGHG 362
Query: 753 PRNCIGQKFAMLEEKVILANILRRF 777
+C+G A +E +V L +L+R
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 687 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGY 746
+AR EDV + + V + +RD VFP P+ D R+P +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID---------LDRDPNPH 346
Query: 747 IPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
+ + G C G A ++ ++++ +L R
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 687 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGY 746
+AR EDV + + V + +RD VFP P+ D R+P +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID---------LDRDPNPH 346
Query: 747 IPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
+ + G C G A ++ ++++ +L R
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|1MKY|A Chain A, Structural Analysis Of The Domain Interactions In Der, A
Switch Protein Containing Two Gtpase Domains
Length = 439
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 64 NVDNQEVFNRIISSKR-LFGHKKGLNR------IWLGGTPYVFIHTAENAEPILNNSRTI 116
NV +FN I++ +R L G R +++ G YVF+ TA RT+
Sbjct: 190 NVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVEPRTV 249
Query: 117 HKSSDYRYIE 126
K S+YR ++
Sbjct: 250 EKYSNYRVVD 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,988,120
Number of Sequences: 62578
Number of extensions: 958154
Number of successful extensions: 2984
Number of sequences better than 100.0: 197
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2083
Number of HSP's gapped (non-prelim): 681
length of query: 809
length of database: 14,973,337
effective HSP length: 107
effective length of query: 702
effective length of database: 8,277,491
effective search space: 5810798682
effective search space used: 5810798682
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)