RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4753
(809 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 475 bits (1225), Expect = e-161
Identities = 101/548 (18%), Positives = 184/548 (33%), Gaps = 152/548 (27%)
Query: 89 RIWLGGTPYVFIHTAENAEPILNNSRTIHKSSDYRYIEP-----WLGNGLLTSA-GHIWH 142
R+ + V + + E+ + L +++ S YR ++ G GL++ WH
Sbjct: 28 RVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87
Query: 143 QRRKILTPAFHFRILEDFVEVFQEQSEVLVRRL-GEVGVGESVNVFPYVTLCTLDIVCET 201
++R+++ AF L +E F E++E LV L + V++ +T +DI+ +
Sbjct: 88 KQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKA 147
Query: 202 AMGRKINAQGDSNSEYVKAVYELSSL------------------YKKHQRCLNTLHSFSY 243
A G + + + +AV + ++ + + L
Sbjct: 148 AFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGR 207
Query: 244 KVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFM 303
+ R+ LK + + L +++A E DE + + TF
Sbjct: 208 DWVQRRREALKRGE--------------EVPADILTQILKAEEG-AQDDEGLLDNFVTFF 252
Query: 304 FEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 363
GH+T++ + +T++ L EI ++ E+ S + L ++YL +
Sbjct: 253 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG---SKRYLDFEDLGRLQYLSQVL 309
Query: 364 KEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRL 423
KE+LRLYP R L EE +
Sbjct: 310 KESLRLYPPAWGTFRLL----EEETL---------------------------------- 331
Query: 424 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKL 483
+ +P +T ++ Y + R F P ++PDRF
Sbjct: 332 ----------------IDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP-- 373
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ + Y PFS
Sbjct: 374 -------------------------------------------------KPRFTYFPFSL 384
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTS 603
G R+CIGQ+FA +E KV++A +L+R V + L + L+P D +
Sbjct: 385 GHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR-FGLQEQATLKPLDPVLCTL---RP 440
Query: 604 RDVAPVSP 611
R P P
Sbjct: 441 RGWQPAPP 448
Score = 274 bits (703), Expect = 5e-84
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T++ + +T++ L EI ++ E+ S + L ++YL +KE+
Sbjct: 256 HETSANHLAFTVMELSRQPEIVARLQAEVDEVIG---SKRYLDFEDLGRLQYLSQVLKES 312
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRLYP R L E+ + +P +T ++ Y + R F P ++P RF
Sbjct: 313 LRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA 372
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
+ + Y PFS G R+CIGQ+FA +E KV++A +L+R V + L + L+
Sbjct: 373 P--KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR-FGLQEQATLK 429
Query: 798 PQDGIRVRLFPR 809
P D + L PR
Sbjct: 430 PLDPVLCTLRPR 441
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 442 bits (1139), Expect = e-148
Identities = 102/600 (17%), Positives = 191/600 (31%), Gaps = 154/600 (25%)
Query: 21 TIALLLTLSYFVVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRL 80
T+ +LL F++ + + IPGP +G I
Sbjct: 25 TMPVLLLTGLFLLVWNY-----EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSAC---NY 76
Query: 81 FGHKKG-LNRIWLGGTPYVFIHTAENAEPILNNSRTIHKSSDYRYIEP---WLGNGLLTS 136
+ G R+W+ G + I + + I+ ++ + ++ + +
Sbjct: 77 YNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNN 136
Query: 137 AGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGE-VGVGESVNVFPYVTLCTL 195
+W R A L V V E + + RL E V+V + L
Sbjct: 137 NPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVML 196
Query: 196 DIVCETAMGRKINAQGDSNSEYVKA------------VYELSSLYKKHQRCLNTLHSFSY 243
D + ++ +++S LYKK+++ + L
Sbjct: 197 DTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIE 256
Query: 244 KVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFM 303
+I E++ + E +++ F LI A +R +LT EN+ + + +
Sbjct: 257 VLIAEKRRRIST------------EEKLEECMDFATELILAEKRGDLTRENVNQCILEML 304
Query: 304 FEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACI 363
DT + SL M +L
Sbjct: 305 IAAPDT---------------------------------------MSVSLFFMLFL---- 321
Query: 364 KEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRL 423
+ +P+V + +EI + + I + +K +E I E++R
Sbjct: 322 ---IAKHPNV-------EEAIIKEIQTVIGE----RDIK-IDDIQKLKVMENFIYESMRY 366
Query: 424 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKL 483
P V + RK ED + Y + + T +I+ + +HR E FP+P + + F
Sbjct: 367 QPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKN---- 421
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
+ PF
Sbjct: 422 -------------------------------------------------VPYRYFQPFGF 432
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRR--EDLTLLGELILRP---QDGIRVMF 598
GPR C G+ AM+ K IL +LRRF V+ + + E + + +L L P ++ + ++F
Sbjct: 433 GPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIF 492
Score = 261 bits (669), Expect = 1e-78
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT S ++ + L L+ + ++ + +EI + + + +K +E I E+
Sbjct: 308 PDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE----RDIKIDDIQKLKVMENFIYES 363
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R P V + RK ED + Y + + T +I+ + +HR + FP+P + F
Sbjct: 364 MRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN- 421
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRR--EDLTLLGELI 795
+ PF GPR C G+ AM+ K IL +LRRF V+ + + E + + +L
Sbjct: 422 ---VPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLS 478
Query: 796 LRP---QDGIRVRLFPR 809
L P ++ + + PR
Sbjct: 479 LHPDETKNMLEMIFTPR 495
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 416 bits (1071), Expect = e-138
Identities = 104/580 (17%), Positives = 200/580 (34%), Gaps = 161/580 (27%)
Query: 45 INRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAE 104
I +P P + L N ++ + ++ G + + G ++ +
Sbjct: 2 IKEMPQPKTFGELKNLPL--LNTDKPVQALMKIADELGE---IFKFEAPGRVTRYLSSQR 56
Query: 105 NAEPILNNSR-TIHKSSDYRYIEPWLGNGLLTSA--GHIWHQRRKILTPAFHFRILEDFV 161
+ + SR + S +++ + G+GL TS W + IL P+F + ++ +
Sbjct: 57 LIKEACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH 116
Query: 162 EVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQ-GDSNSEYVKA 220
+ + + LV++ + E + V +T TLD + + N+ D ++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITS 176
Query: 221 VYELSSL------------------YKKHQRCLNTLHSFSYKVINERKAELKARKNTEDE 262
+ ++ Q + ++ K+I +RKA + +
Sbjct: 177 MVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD---- 232
Query: 263 TIEDPTEHVKKRPAFLDLLIEASERHN---LTDENIREEVDTFMFEGHDTTSAAICWTLL 319
L ++ + L DENIR ++ TF+ GH+TTS + + L
Sbjct: 233 --------------LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALY 278
Query: 320 LLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARK 379
L N L+ +EA R+
Sbjct: 279 FLVKNPH-------------------------------VLQKAAEEAARV---------- 297
Query: 380 LGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVP 439
L + P + + + +KY+ + EALRL+P+ P + ED
Sbjct: 298 LVDP---------------VP--SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 440 LPD-YVLPRDTEVIIVVYNLHRDPEVFP-RPELYDPDRFLSENAKLSEDVPLPDYVLPRD 497
L Y L + E+++++ LHRD ++ E + P+RF
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--------------------- 379
Query: 498 TEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLE 557
EN + + + PF G R CIGQ+FA+ E
Sbjct: 380 ------------------------------ENPSAIPQHAFKPFGNGQRACIGQQFALHE 409
Query: 558 EKVILANILRRFRVEAVDRREDLTLLGELILRPQDG-IRV 596
++L +L+ F E E L + L L+P+ ++
Sbjct: 410 ATLVLGMMLKHFDFEDHTNYE-LDIKETLTLKPEGFVVKA 448
Score = 238 bits (610), Expect = 2e-70
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+TTS + + L L N + K EE + + + +KY+ + EA
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD----PVPSYKQVKQLKYVGMVLNEA 321
Query: 678 LRLYPSVPFIARKLSEDVPLPD-YVLPRDTEVIIVVYNLHRDAKVFP-RPELYDPGRFLS 735
LRL+P+ P + ED L Y L + E+++++ LHRD ++ E + P RF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-- 379
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
EN + + + PF G R CIGQ+FA+ E ++L +L+ F E E L + L
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE-LDIKETLT 438
Query: 796 LRPQDGIRVRLFPR 809
L+P+ G V+ +
Sbjct: 439 LKPE-GFVVKAKSK 451
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 390 bits (1004), Expect = e-128
Identities = 90/573 (15%), Positives = 168/573 (29%), Gaps = 156/573 (27%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
P ++P+LG+ I+ ++L G+ I + G +
Sbjct: 7 VYPVTVPILGHIIQFGKSPLGFMQEC--KRQLKS---GIFTINIVGKRVTIVGDPHEHSR 61
Query: 109 ILNNS-RTIHKSSDYRYIEPWLGNGLLTSA-GHIWHQRRKILTPAFHFRILEDFVEVFQE 166
+ Y ++ P G G+ +A ++ L ++FV Q
Sbjct: 62 FFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQH 121
Query: 167 QSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYVKAVYELSS 226
+ + + GE +N+ + ++ C+ G + + D+ + + + ++ S
Sbjct: 122 EVRKFMAANWDKDEGE-INLLEDCSTMIINTACQCLFGEDLRKRLDA-RRFAQLLAKMES 179
Query: 227 L------------------YKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPT 268
+ L ++I RK E +
Sbjct: 180 SLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD----------- 228
Query: 269 EHVKKRPAFLDLLIEASER--HNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQE 326
L L+ A R ++ + + MF G T+S W++L L
Sbjct: 229 ---SSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 285
Query: 327 IQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYE 386
++ +LEA KE Y
Sbjct: 286 VK-----------------------------HLEALRKEIEEF----------PAQLNYN 306
Query: 387 EIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLP 446
+ ++ M + E C +E++R P + + RK+ DV + YV+P
Sbjct: 307 NV------------------MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVP 348
Query: 447 RDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYN 506
+ + H D E FP +P R+
Sbjct: 349 KGDIIACSPLLSHHDEEAFP-----EPRRW------------------------------ 373
Query: 507 LHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANIL 566
DP R + +I F AG CIGQKF +L+ K ILA
Sbjct: 374 --------------DPERDE------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAF 413
Query: 567 RRFRVEAVDRREDLTLLGELILRP-QDGIRVMF 598
R + + + +++ P RV +
Sbjct: 414 RSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKY 446
Score = 228 bits (584), Expect = 5e-67
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQN--KVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIK 675
T+S W++L L +++ + +EI + + ++ M + E C +
Sbjct: 266 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN-----YNNVMDEMPFAERCAR 320
Query: 676 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
E++R P + + RK+ DV + YV+P+ + H D + FP P +DP R
Sbjct: 321 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE- 379
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
+ +I F AG CIGQKF +L+ K ILA R + + + ++
Sbjct: 380 -----KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 434
Query: 796 LRP-QDGIRVRLFPR 809
+ P RV+ R
Sbjct: 435 VGPTASQCRVKYIRR 449
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 369 bits (949), Expect = e-120
Identities = 88/582 (15%), Positives = 180/582 (30%), Gaps = 158/582 (27%)
Query: 36 IKQSRLVKLINRIPG-PTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGG 94
+ + L + P + +P LG++I E +G + + G
Sbjct: 1 MAKKTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENA---YEKYGP---VFSFTMVG 54
Query: 95 TPYVFIHTAENAEPILNNS-RTIHKSSDY-RYIEPWLGNGLLTSA-GHIWHQRRKILTPA 151
+ ++ ++ A + N+ ++ Y R P G G+ ++ +++K+L
Sbjct: 55 KTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSG 114
Query: 152 FHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQG 211
+ + V + +++++ GE NVF ++ + G++I +Q
Sbjct: 115 LNIAHFKQHVSIIEKETKEYFESWGE---SGEKNVFEALSELIILTASHCLHGKEIRSQL 171
Query: 212 DSNSEYVKAVYEL-----------------SSLYKKHQRCLNTLHSFSYKVINERKAELK 254
+ E V +Y +++ R + YK I +R+ +
Sbjct: 172 N---EKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE 228
Query: 255 ARKNTEDETIEDPTEHVKKRPAFLDLLIEASER--HNLTDENIREEVDTFMFEGHDTTSA 312
+ L L++A+ + LTD+ + + + G T+S
Sbjct: 229 KIDD------------------ILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSST 270
Query: 313 AICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPS 372
W L ++ + + C E +
Sbjct: 271 TSAWMGFFLARDKTL-------------------------------QKKCYLEQKTV--- 296
Query: 373 VPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIAR 432
G P T L + L+ CIKE LRL P + + R
Sbjct: 297 -------CGEN---------------LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMR 334
Query: 433 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDY 492
+ Y +P +V + R + + ++PDR+L +N
Sbjct: 335 MARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA---------- 384
Query: 493 VLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQK 552
+ Y+PF AG CIG+
Sbjct: 385 ---------------------------------------SGEKFAYVPFGAGRHRCIGEN 405
Query: 553 FAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGI 594
FA ++ K I + +LR + + +D +I P++ +
Sbjct: 406 FAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPV 447
Score = 247 bits (632), Expect = 9e-74
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
T+S W L ++ +Q K Y E +L P T L + L+ CIKE
Sbjct: 265 QHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVC--GENLPPLTYDQLKDLNLLDRCIKET 322
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL P + + R + Y +P +V + R + ++P R+L +N
Sbjct: 323 LRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN 382
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
A + Y+PF AG CIG+ FA ++ K I + +LR + + +D +I
Sbjct: 383 PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHT 442
Query: 798 PQDGIRVRLFPR 809
P + +R R
Sbjct: 443 P-ENPVIRYKRR 453
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 356 bits (916), Expect = e-115
Identities = 86/568 (15%), Positives = 164/568 (28%), Gaps = 152/568 (26%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
G+ E D + R+ + G + L G V + + E
Sbjct: 8 RVSGGHDEHGHLEEFRTDPIGLMQRV---RDELGD---VGTFQLAGKQVVLLSGSHANEF 61
Query: 109 ILNNS-RTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQ 167
+ ++ Y ++ P G G++ ++ + A ++ ++Q
Sbjct: 62 FFRAGDDDLDQAKAYPFMTPIFGEGVVFD-ASPERRKEMLHNAALRGEQMKGHAATIEDQ 120
Query: 168 SEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYVKAVYELS-- 225
++ GE +++ + T+ +G+K Q D + K +EL
Sbjct: 121 VRRMIADWGE---AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDG--RFAKLYHELERG 175
Query: 226 -------------SLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVK 272
+++ N L + ++N R A K+ D
Sbjct: 176 TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRD----------- 224
Query: 273 KRPAFLDLLIEASE---RHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQN 329
LD+LI + + I + MF GH T+S WTL+ L +++
Sbjct: 225 ----MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 330 KVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIV 389
V +E+ + + +L + LE +KE LRL+P + + R
Sbjct: 281 AVIDELDEL---YGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVA--------- 328
Query: 390 ATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDT 449
F + + +
Sbjct: 329 --------KGEFE-------------------------------------VQGHRIHEGD 343
Query: 450 EVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHR 509
V +R PE FP P + P R+
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARYEQP------------------------------ 373
Query: 510 DAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 569
N + +IPF AG C+G FA+++ K I + +LR +
Sbjct: 374 ------------------RQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 570 RVEAVDRRE-DLTLLGELILRPQDGIRV 596
E E +++++ V
Sbjct: 416 EFEMAQPPESYRNDHSKMVVQLAQPAAV 443
Score = 232 bits (595), Expect = 1e-68
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H T+S WTL+ L +++ V +E+ + + +L + LE +KE
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDEL---YGDGRSVSFHALRQIPQLENVLKET 314
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + + R + + + + V +R + FP P + P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 738 AA-GRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE-DLTLLGELI 795
N + +IPF AG C+G FA+++ K I + +LR + E E +++
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMV 434
Query: 796 LRPQDGIRVRLFPR 809
++ VR R
Sbjct: 435 VQLAQPAAVRYRRR 448
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 335 bits (860), Expect = e-106
Identities = 103/598 (17%), Positives = 186/598 (31%), Gaps = 166/598 (27%)
Query: 39 SRLVKLINRIPGPTSLPVLGN-SIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPY 97
+R + N IP P L +V + + + +G + R LG
Sbjct: 2 TRSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGP---IYREKLGNVES 58
Query: 98 VFIHTAENAEPILNNSRTIHKSSDYRYIEPWLG--------NGLLTSAGHIWHQRRKILT 149
V++ E+ + ++ + + I PW+ G+L W + R L
Sbjct: 59 VYVIDPEDVALLF---KSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALN 115
Query: 150 P-AFHFRILEDFVEVFQEQSEVLVRRLGEV-----GVGESVNVFPYVTLCTLDIVCETAM 203
++F+ + S V L S ++ + + +
Sbjct: 116 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 175
Query: 204 GRKINAQGDSNS----EYVKAVYEL-------------------SSLYKKHQRCLNTLHS 240
G + + + ++ A+Y++ + +K H + + S
Sbjct: 176 GERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFS 235
Query: 241 FSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVD 300
+ EL+ + + + + +L ++ E+I+ V
Sbjct: 236 KADIYTQNFYWELRQKGSVHHD--------------YRGILYRLLGDSKMSFEDIKANVT 281
Query: 301 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLE 360
+ G DTTS + W L + A + K
Sbjct: 282 EMLAGGVDTTSMTLQWHLYEM---------------ARNLKV-------------QD--- 310
Query: 361 ACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEA 420
+ E++A +A L + L+A IKE
Sbjct: 311 ----------------------MLRAEVLAARHQAQGD----MATMLQLVPLLKASIKET 344
Query: 421 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN 480
LRL+P + R L D+ L DY++P T V + +Y L R+P F PE +DP R+LS++
Sbjct: 345 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 404
Query: 481 AKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 540
+ +
Sbjct: 405 KN--------------------------------------------------ITYFRNLG 414
Query: 541 FSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMF 598
F G R C+G++ A LE + L N+L FRVE + D+ LIL P+ I F
Sbjct: 415 FGWGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMPEKPISFTF 471
Score = 231 bits (591), Expect = 1e-67
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 5/192 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DTTS + W L + N ++Q+ + E++A +A L + L+A IKE
Sbjct: 288 VDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD---MATMLQLVPLLKASIKET 344
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + R L D+ L DY++P T V + +Y L R+ F PE +DP R+LS++
Sbjct: 345 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 404
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
+ + F G R C+G++ A LE + L N+L FRVE + D+ LIL
Sbjct: 405 KNI-TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILM 462
Query: 798 PQDGIRVRLFPR 809
P+ I +P
Sbjct: 463 PEKPISFTFWPF 474
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 291 bits (748), Expect = 9e-91
Identities = 112/572 (19%), Positives = 196/572 (34%), Gaps = 146/572 (25%)
Query: 36 IKQSRLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGT 95
I + + PG LP LG ++ D R + FG + + L G
Sbjct: 2 ITSPTNLNSLPIPPGDFGLPWLGETLNFLNDGDFGKKRQ----QQFG---PIFKTRLFGK 54
Query: 96 PYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLG-NGLLTSAGHIWHQRRKILTPAFHF 154
+FI A + + +++ LG N L T G I RRKIL AF
Sbjct: 55 NVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLP 114
Query: 155 RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSN 214
R L+ ++ + + + G+ V +P + T D+ MG K++
Sbjct: 115 RTLDSYLPKMDGIVQGYLEQWGK---ANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLF 171
Query: 215 SEYVKAVYELSSL--------YKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIED 266
+ + L SL + K QR L + K+I R+ + + ++
Sbjct: 172 PWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEED-------- 223
Query: 267 PTEHVKKRPAFLDLLIEAS--ERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSN 324
L +L+ A L+ +++++ +F GH+T
Sbjct: 224 ----------ALGILLAARDDNNQPLSLPELKDQILLLLFAGHET--------------- 258
Query: 325 QEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKV 384
T +L+S L L + + +V
Sbjct: 259 ------------------------LTSALSSFCLL-------LGQHSDI-------RERV 280
Query: 385 YEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYV 444
+E T +L M YL+ ++E LRL P V R+L +D +
Sbjct: 281 RQEQNKLQLSQE-----LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFH 335
Query: 445 LPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVV 504
P+ V + H DP+++P PE +DP+RF + +
Sbjct: 336 FPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGS----------------------- 372
Query: 505 YNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILAN 564
A P+ ++PF G R C+G++FA LE K+
Sbjct: 373 -------------------------ATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATR 407
Query: 565 ILRRFRVEAVDRREDLTLLGELILRPQDGIRV 596
++++F + ++L L+ RP+D +RV
Sbjct: 408 LIQQFDWTLLP-GQNLELVVTPSPRPKDNLRV 438
Score = 211 bits (540), Expect = 7e-61
Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T ++A+ LLLG + +I+ +V +E + T +L M YL+ ++E
Sbjct: 256 HETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS----QELTAETLKKMPYLDQVLQEV 311
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL P V R+L +D + P+ V + H D ++P PE +DP RF +
Sbjct: 312 LRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDG 371
Query: 738 AAGRN-PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
+A N P+ ++PF G R C+G++FA LE K+ ++++F + ++L L+
Sbjct: 372 SATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLP-GQNLELVVTPSP 430
Query: 797 RPQDGIRVRLFP 808
RP+D +RV+L
Sbjct: 431 RPKDNLRVKLHS 442
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 287 bits (737), Expect = 2e-88
Identities = 85/593 (14%), Positives = 183/593 (30%), Gaps = 126/593 (21%)
Query: 25 LLTLSYFVVRRIKQSRLVKLINRIPG-PTSLPVLGNSIECNVDNQEVFNRIISSK-RLFG 82
+ + ++ R + R P S+P LG +++ D R+ +F
Sbjct: 1 MAKKTSSLLSRRRTRRP----GEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIF- 55
Query: 83 HKKGLNRIWLGGTPYVFIHTAENAEPILNNSRTI--HKSSDYRYIEPWLGNGLLTSAGHI 140
I +GG + + + ++ RT + +E L +
Sbjct: 56 ------TILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYS--- 106
Query: 141 WHQRRKILTPAFHFRILEDFVEV-FQEQSEVLVRRLGEVGV-GESVNVFPYVTLCTLDIV 198
+ + R L+ E + VL+ E G + + + L
Sbjct: 107 PSDEKARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAG 166
Query: 199 CETAMGRKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLHSFSYKVINER--KAELKAR 256
T G + + + + + ++ ++ L + ++ +
Sbjct: 167 YLTLYGIEALPRTHESQAQDRVHS--ADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVK 224
Query: 257 KNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICW 316
R +L+ + E +++E + ++ A W
Sbjct: 225 SRLWKLLSPARLARRAHRSKWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFW 284
Query: 317 TLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFI 376
LL L N E V E+
Sbjct: 285 LLLFLLKNPEALAAVRGEL----------------------------------------- 303
Query: 377 ARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSE 436
E I+ + + S + L+S L++ + E+LRL PFI R++
Sbjct: 304 ---------ESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVV 353
Query: 437 DVPLPD-----YVLPRDTEVIIV-VYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLP 490
D+ +P + L R +++ + RDPE++ PE++ +RFL+ +
Sbjct: 354 DLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGS-------- 405
Query: 491 DYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIG 550
+ + Y G+ R +P+ AG +C+G
Sbjct: 406 ------------------------EKKDFYKDGK--------RLKNYNMPWGAGHNHCLG 433
Query: 551 QKFAMLEEKVILANILRRFRVEAVDRRE-----DLTLLGELILRPQDGIRVMF 598
+ +A+ K + +L +E ++ DL+ G +++P+ + V +
Sbjct: 434 RSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRY 486
Score = 207 bits (529), Expect = 8e-59
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 37/298 (12%)
Query: 538 YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVM 597
+P A +G K M K L +L R+ R L L+ + G+
Sbjct: 203 LLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKW-LESYLLHLEEMGV--- 258
Query: 598 FGVDTSRDVAP--VSPIWAPLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVA----TSP 651
+ A V +WA A W LL L N E V E+ +
Sbjct: 259 ----SEEMQARALVLQLWAT--QGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQ 312
Query: 652 KASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD-----YVLPRDT 706
S + L+S L++ + E+LRL PFI R++ D+ +P + L R
Sbjct: 313 PVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGD 371
Query: 707 EVIIV-VYNLHRDAKVFPRPELYDPGRFLSENA---------AGRNPYGYIPFSAGPRNC 756
+++ + RD +++ PE++ RFL+ + R +P+ AG +C
Sbjct: 372 RLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHC 431
Query: 757 IGQKFAMLEEKVILANILRRFRVEAVDRRE-----DLTLLGELILRPQDGIRVRLFPR 809
+G+ +A+ K + +L +E ++ DL+ G +++P+ + VR R
Sbjct: 432 LGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR 489
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 285 bits (731), Expect = 5e-88
Identities = 58/354 (16%), Positives = 125/354 (35%), Gaps = 56/354 (15%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAEP 108
+P+LG+ D +++ + RI LG + E
Sbjct: 26 VAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVV-------RIKLGPKTVYAVTNPELTGA 78
Query: 109 ILNNSRTIHKSSDYRYIEPWLGN-GLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQ 167
+ N + +E LG G+ T+ G + ++R+ + PAF + + + +E+
Sbjct: 79 LALNPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEE 138
Query: 168 SEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYVKAVYELSSL 227
+ L R G++V+ + + + + + A+ +
Sbjct: 139 AHALTERWQP---GKTVDATSESFRVAVRVAARCLLRGQYMDE--RAERLCVALATVFRG 193
Query: 228 -------------------YKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPT 268
++ L LH ++I ER+A +
Sbjct: 194 MYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQ-------------- 239
Query: 269 EHVKKRPAFLDLLIEASER--HNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQE 326
K L L+EA + + ++ I ++V + G +T ++ I W L L + E
Sbjct: 240 ----KPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPE 295
Query: 327 IQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
+++ +E+ A + +P + +++ I EA+RL P+V + R+
Sbjct: 296 HADRIRDEVEAVTGG----RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRA 345
Score = 248 bits (635), Expect = 4e-74
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+T ++ I W L L + E +++ +E+ A + +P + +++ I EA
Sbjct: 276 SETIASTIMWLLQALADHPEHADRIRDEVEAVTGG----RPVAFEDVRKLRHTGNVIVEA 331
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+RL P+V + R+ + L Y +P ++I Y + RD K + +DP R+L E
Sbjct: 332 MRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPER 391
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
AA Y PFSAG R C F+M + +I A + ++R E V + + LR
Sbjct: 392 AANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN-DAVRVGITLR 450
Query: 798 PQDGIRVRLFPR 809
P D + VR R
Sbjct: 451 PHDLL-VRPVAR 461
Score = 194 bits (495), Expect = 2e-54
Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 50/194 (25%)
Query: 403 TIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ +++ I EA+RL P+V + R+ + L Y +P ++I Y + RDP
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 463 EVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDP 522
+ + +DPDR+L E A
Sbjct: 374 KSYDDNLEFDPDRWLPERAA---------------------------------------- 393
Query: 523 GRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
Y PFSAG R C F+M + +I A + ++R E V +
Sbjct: 394 ---------NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN-DAV 443
Query: 583 LGELILRPQDGIRV 596
+ LRP D +
Sbjct: 444 RVGITLRPHDLLVR 457
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 266 bits (682), Expect = 1e-80
Identities = 91/576 (15%), Positives = 170/576 (29%), Gaps = 129/576 (22%)
Query: 46 NRIPGP-TSLPVLGNSIECNVDNQEVFNRIISSKR---LFGHKKGLNRIWLGGTPYVFIH 101
P +P LG +++ + E ++ +F L G FI
Sbjct: 13 GEPPLENGLIPYLGCALQFGANPLEFLRAN--QRKHGHVF-------TCKLMGKYVHFIT 63
Query: 102 TAENAEPILNNSRTIH-KSSDYRYIEPWLG-NGLLTSAGHIWHQRRKILTPAFHFRILED 159
+ +L + + K + G + G+ L
Sbjct: 64 NPLSYHKVLCHGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNS 123
Query: 160 FVEVFQEQSEVLVRRLGE----VGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNS 215
E E + ++R + ++ + + T GR + + +
Sbjct: 124 LTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKA 183
Query: 216 EYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRP 275
+ + K + L ++ + + +L E++ E+++KR
Sbjct: 184 HILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKL-------AESLRH--ENLQKRE 234
Query: 276 A---FLDLLIEASERHN-LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKV 331
+ + L + ++ + D + ++ T A W+L + N E
Sbjct: 235 SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAA 294
Query: 332 YEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVAT 391
EE + R L N
Sbjct: 295 TEE-----------------------------------------VKRTLENA------GQ 307
Query: 392 SSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD----YVLPR 447
+ LN + L++ IKE+LRL R ED L Y + +
Sbjct: 308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRK 366
Query: 448 DTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNL 507
D + + +H DPE++P P + DR+L EN K
Sbjct: 367 DDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK------------------------- 401
Query: 508 HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILR 567
+ Y G + Y Y+PF +G C G+ FA+ E K L +L
Sbjct: 402 -------TKTTFYCNGL--------KLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLS 446
Query: 568 RFRVEAVDRRE-----DLTLLGELILRPQDGIRVMF 598
F +E ++ + D + G IL P + I +
Sbjct: 447 YFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKY 482
Score = 196 bits (499), Expect = 8e-55
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 34/272 (12%)
Query: 565 ILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTSRDVAP--VSPIWAPLRHDTTS 622
+ R E + +RE ++ L L + D + + A + +WA T
Sbjct: 221 LAESLRHENLQKRESISELISLRMFLNDTLSTF----DDLEKAKTHLVVLWA--SQANTI 274
Query: 623 AAICWTLLLLGSNQEIQNKVYEEIVAT-------SPKASSLKPFTTRSLNSMKYLEACIK 675
A W+L + N E EE+ T + + LN + L++ IK
Sbjct: 275 PATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIK 334
Query: 676 EALRLYPSVPFIARKLSEDVPLPD----YVLPRDTEVIIVVYNLHRDAKVFPRPELYDPG 731
E+LRL R ED L Y + +D + + +H D +++P P +
Sbjct: 335 ESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYD 393
Query: 732 RFLSENAAGR---------NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAV 782
R+L EN + Y Y+PF +G C G+ FA+ E K L +L F +E +
Sbjct: 394 RYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELI 453
Query: 783 DRRE-----DLTLLGELILRPQDGIRVRLFPR 809
+ + D + G IL P + I + +
Sbjct: 454 EGQAKCPPLDQSRAGLGILPPLNDIEFKYKFK 485
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 251 bits (644), Expect = 3e-75
Identities = 63/376 (16%), Positives = 130/376 (34%), Gaps = 58/376 (15%)
Query: 38 QSRLVKLINRIPGPTSLPVLGN--SIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGT 95
+ + +PGPT+ P+LG+ I ++ + + + +G + R+ LG
Sbjct: 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYG---QIFRMKLGSF 72
Query: 96 PYVFIHTAENAEPILNN-----SRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTP 150
V + + E + R K GL+ G W + R
Sbjct: 73 DSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQK 132
Query: 151 AFH-FRILEDFVEVFQEQSEVLVRRLGEVGV--GESVNVFPYVTLCTLDIVCETAMGRKI 207
+ + E + R+ E+ G +++ + + + +C ++
Sbjct: 133 KLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRF 192
Query: 208 NAQGDSNSE----YVKAVYELSS-------------------LYKKHQRCLNTLHSFSYK 244
E ++ A+ + S +++ H +T+
Sbjct: 193 GLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKP 252
Query: 245 VINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMF 304
I+ R + D L + ++ +L+ + + V
Sbjct: 253 CIDNRLQRYSQQP-------------------GADFLCDIYQQDHLSKKELYAAVTELQL 293
Query: 305 EGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIK 364
+TT+ ++ W L L N + Q ++ +E+ + P + L +M YL+AC+K
Sbjct: 294 AAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP---RAEDLRNMPYLKACLK 350
Query: 365 EALRLYPSVPFIARKL 380
E++RL PSVPF R L
Sbjct: 351 ESMRLTPSVPFTTRTL 366
Score = 239 bits (611), Expect = 2e-70
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+TT+ ++ W L L N + Q ++ +E+ + P + L +M YL+AC+KE+
Sbjct: 296 VETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP---RAEDLRNMPYLKACLKES 352
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+RL PSVPF R L + L +Y LP+ T + + L F + P R+L +
Sbjct: 353 MRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE 412
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
NP+ ++PF G R CIG++ A L+ + L I++++ + A D E + +L IL
Sbjct: 413 KK-INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATD-NEPVEMLHLGILV 470
Query: 798 PQDGIRVRLFPR 809
P + + PR
Sbjct: 471 PSRELPIAFRPR 482
Score = 185 bits (473), Expect = 3e-51
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 55/216 (25%)
Query: 383 KVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD 442
++ +E+ + + L +M YL+AC+KE++RL PSVPF R L + L +
Sbjct: 319 RLLQEVQSVLPDNQTP----RAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGE 374
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVII 502
Y LP+ T + + L + F + P+R+L + K
Sbjct: 375 YALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-------------------- 414
Query: 503 VVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVIL 562
NP+ ++PF G R CIG++ A L+ + L
Sbjct: 415 ------------------------------INPFAHLPFGIGKRMCIGRRLAELQLHLAL 444
Query: 563 ANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMF 598
I++++ + A D E + +L IL P + + F
Sbjct: 445 CWIIQKYDIVATD-NEPVEMLHLGILVPSRELPIAF 479
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 247 bits (633), Expect = 1e-73
Identities = 62/565 (10%), Positives = 139/565 (24%), Gaps = 152/565 (26%)
Query: 45 INRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVF----- 99
I IPG LP++G + + R+ + + R+ + ++
Sbjct: 27 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQV 86
Query: 100 --IHTAENAEPILNNSRTIHK---SSDYRYIEPWLGN---GLLTSAGHIWHQRRKILTPA 151
+ ++ + + + K + Y G H++ K L
Sbjct: 87 VALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFF 146
Query: 152 FHFRILEDFVEVFQEQSEVLVRRL-GEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQ 210
FQ L L E+ + + + + G
Sbjct: 147 LLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPADT 206
Query: 211 GDSNSEYVKA-------VYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDET 263
++ L S+ +H+FS + + +
Sbjct: 207 KLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYE------ 260
Query: 264 IEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGS 323
+ ++L+EA + +E + F + +G
Sbjct: 261 --------FFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGR 312
Query: 324 -NQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGN 382
++ N++ EEI + T ++ M+ ++ + E LR P V +
Sbjct: 313 AGHQVHNRLAEEIRSVIKSNG--GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGR--- 367
Query: 383 KVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD 442
K D+ +
Sbjct: 368 ---------------------------------AKK------------------DLVIES 376
Query: 443 ----YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDT 498
+ + + RDP++F R + + P+RF+ E +
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE---------------- 420
Query: 499 EVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF-------SAGPRNCIGQ 551
+ + G + C G+
Sbjct: 421 ---------------------------------KLLRHVLWSNGPETETPTVGNKQCAGK 447
Query: 552 KFAMLEEKVILANILRRFRVEAVDR 576
F +L ++ + I RR+ ++
Sbjct: 448 DFVVLVARLFVIEIFRRYDSFDIEV 472
Score = 202 bits (515), Expect = 6e-57
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 618 HDTTSAAICWTLLLL-----GSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEA 672
T + + + ++ N++ EEI + T ++ M+ ++
Sbjct: 292 CFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNG--GELTMGAIEKMELTKS 349
Query: 673 CIKEALRLYPSVPFIARKLSEDVPLPD----YVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
+ E LR P V + +D+ + + + + RD K+F R + +
Sbjct: 350 VVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEF 409
Query: 729 DPGRFLSENAAGRNPYGYIPF-------SAGPRNCIGQKFAMLEEKVILANILRRFRVEA 781
P RF+ E + + G + C G+ F +L ++ + I RR+
Sbjct: 410 VPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFD 469
Query: 782 VDR 784
++
Sbjct: 470 IEV 472
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 231 bits (592), Expect = 8e-68
Identities = 112/577 (19%), Positives = 205/577 (35%), Gaps = 147/577 (25%)
Query: 48 IPGPTSLPVLGNSIECNVDNQEVFNRIISS-KRLFGHKKGLNRIWLGGTPYVFIHTAENA 106
IPGPT LP LGN + + +++G + G P + I +
Sbjct: 16 IPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWG-------FYDGQQPVLAITDPDMI 68
Query: 107 EPILNNSRTIHKSSDYRYIEPW--LGNGLLTSAGHIWHQRRKILTPAF-------HFRIL 157
+ +L ++ R P + + + + W + R +L+P F I+
Sbjct: 69 KTVLV-KECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPII 127
Query: 158 EDFVEVFQEQSEVLVRRLGE-VGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSE 216
+ +VLVR L G+ V + ++D++ T+ G I++ +
Sbjct: 128 AQY-------GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDP 180
Query: 217 YVKAVYELSSL-YKKHQRCLNTLHSFSYKVINERKAELKARKNTE------DETIED-PT 268
+V+ +L + T+ F ++ + R+ T E
Sbjct: 181 FVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 240
Query: 269 EHVKKRPAFLDLLIEA------SERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLG 322
+ K R FL L+I++ L+D + + F+F G++TTS+ + + + L
Sbjct: 241 DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 300
Query: 323 SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGN 382
++ ++Q K+ EEI A P +
Sbjct: 301 THPDVQQKLQEEIDAVLPNKAPPT------------------------------------ 324
Query: 383 KVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD 442
Y+ + M+YL+ + E LRL+P + R +DV +
Sbjct: 325 --YDTV-------------------LQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING 363
Query: 443 YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVII 502
+P+ V+I Y LHRDP+ + PE + P+
Sbjct: 364 MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE---------------------------- 395
Query: 503 VVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVIL 562
RF +N +PY Y PF +GPRNCIG +FA++ K+ L
Sbjct: 396 ---------------------RFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAL 434
Query: 563 ANILRRFRVEAVDR-REDLTLLGELILRPQDGIRVMF 598
+L+ F + + L L +L+P+ + +
Sbjct: 435 IRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 471
Score = 218 bits (558), Expect = 5e-63
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TTS+ + + + L ++ ++Q K+ EEI A P P T ++ M+YL+ + E
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK---APPTYDTVLQMEYLDMVVNET 341
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRL+P + R +DV + +P+ V+I Y LHRD K + PE + P RF +N
Sbjct: 342 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 401
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDR-REDLTLLGELIL 796
+PY Y PF +GPRNCIG +FA++ K+ L +L+ F + + L L +L
Sbjct: 402 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLL 461
Query: 797 RPQDGIRVRLFPR 809
+P+ + +++ R
Sbjct: 462 QPEKPVVLKVESR 474
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 230 bits (589), Expect = 1e-67
Identities = 73/595 (12%), Positives = 151/595 (25%), Gaps = 174/595 (29%)
Query: 45 INRIPGPTSLPVLGNSIEC-----NVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVF 99
+ IPG +P + ++ + R R+ ++ + R + P+V
Sbjct: 8 LREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFR----SRMQKYQSTVFRANMPPGPFVS 63
Query: 100 ------IHTAENAEPILNNSRTIHKS----SDYRYIEPWLGN----GLLTSAG------- 138
+ + PIL + + K Y G L +
Sbjct: 64 SNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLK 123
Query: 139 ----HIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCT 194
+ + P F E F + E ++
Sbjct: 124 NLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAK-----------NGKAAFNDVGEQAA 172
Query: 195 LDIVCETAMGRKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELK 254
+ ++ + L S + TL + E
Sbjct: 173 FRFLGRAYFNSN-----PEETKLGTSAPTLISSWVLFNL-APTLDLGLPWFLQEPLLHTF 226
Query: 255 ARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAI 314
++ + + ++ +A + DE + + F
Sbjct: 227 RLPAFLIKSTYNKLYDYFQS-VATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILF 285
Query: 315 CWTLLLLG-SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSV 373
TL +G + + + ++ EE I+ A++ Y
Sbjct: 286 PNTLKWIGLAGENLHTQLAEE----------------------------IRGAIKSYGDG 317
Query: 374 PFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARK 433
T+ ++ M ++ + E+LR+ P VP K
Sbjct: 318 NV---------------------------TLEAIEQMPLTKSVVYESLRIEPPVPPQYGK 350
Query: 434 LSEDVPLPD----YVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPL 489
+ + + + + + +DP+VF RPE Y PDRF+ +
Sbjct: 351 AKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG--------- 401
Query: 490 PDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP---- 545
Y+ +S GP
Sbjct: 402 -------------------------------------------EALLKYVWWSNGPETES 418
Query: 546 -----RNCIGQKFAMLEEKVILANILRRFRVEAVDRRED-LTLLGELILRPQDGI 594
+ C G+ F +L ++ + + RR+ ++ E L L + I
Sbjct: 419 PTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRASI 473
Score = 212 bits (541), Expect = 7e-61
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 19/200 (9%)
Query: 618 HDTTSAAICWTLLLLG-SNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKE 676
TL +G + + + ++ EEI T ++ M ++ + E
Sbjct: 278 FGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGD-GNVTLEAIEQMPLTKSVVYE 336
Query: 677 ALRLYPSVPFIARKLSEDVPLPD----YVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+LR+ P VP K + + + + + + +D KVF RPE Y P R
Sbjct: 337 SLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDR 396
Query: 733 FLSENAAGRNPYGYIPFSAGP---------RNCIGQKFAMLEEKVILANILRRFRVEAVD 783
F+ + Y+ +S GP + C G+ F +L ++ + + RR+ ++
Sbjct: 397 FVGDG---EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE 453
Query: 784 RRED-LTLLGELILRPQDGI 802
E L L + I
Sbjct: 454 LGESPLGAAVTLTFLKRASI 473
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 221 bits (564), Expect = 1e-64
Identities = 65/567 (11%), Positives = 146/567 (25%), Gaps = 171/567 (30%)
Query: 46 NRIPGPTSLPVLGNSIECNVDNQEVFNRIIS--SKRLFGHKKGLNRIWLGGTPYVFIHTA 103
+IP L NS+ + + LF + L G ++ + A
Sbjct: 3 EQIPH---DKSLDNSLTLLKEGYLFIKNRTERYNSDLF-------QARLLGKNFICMTGA 52
Query: 104 ENAEPILNNSRTIHKSSDYRYI-EPWLG-NGLLTSAGHIWHQRRKILTPAFHFRILEDFV 161
E A+ + R +++ + + + G N + G R+ + +
Sbjct: 53 EAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLA 112
Query: 162 EVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYVKAV 221
E+ E+ + V R + + V +F + C A + ++ +
Sbjct: 113 ELMTEEWKAAVTRWEK---ADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDM 169
Query: 222 YE----LSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAF 277
+ + + K +R + +I + +A L +
Sbjct: 170 VDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGT----------------A 213
Query: 278 LDLLIEASERHN--LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI 335
L + ++ L E+ + S + ++ L L + + + +
Sbjct: 214 LHEMAFHTQEDGSQLDSRMAAIEL-INVLRPIVAISYFLVFSALALHEHPKYKEWLRSG- 271
Query: 336 VATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKA 395
+ + E ++E R YP PF+
Sbjct: 272 -------------------NSREREMFVQEVRRYYPFGPFLGAL---------------- 296
Query: 396 SSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVV 455
K F + + T V++ +
Sbjct: 297 -VKKDFV-------------------------------------WNNCEFKKGTSVLLDL 318
Query: 456 YNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFP 515
Y + DP ++ P+ + P+RF
Sbjct: 319 YGTNHDPRLWDHPDEFRPERFAER------------------------------------ 342
Query: 516 RPELYDPGRFLSENAAGRNPYGYIPFSAGP----RNCIGQKFAMLEEKVILANILRRFRV 571
N + IP G C G+ + K L ++ +
Sbjct: 343 ----------------EENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
Query: 572 EAVDRREDLTLLGELILRPQDGIRVMF 598
+ ++ + L + P+ G +
Sbjct: 387 DVPEQSLHYS-LARMPSLPESGFVMSG 412
Score = 177 bits (452), Expect = 4e-49
Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 28/196 (14%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
S + ++ L L + + + + + + E ++E
Sbjct: 244 IVAISYFLVFSALALHEHPKYKEWLRSG--------------------NSREREMFVQEV 283
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R YP PF+ + +D + + T V++ +Y + D +++ P+ + P RF
Sbjct: 284 RRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAER- 342
Query: 738 AAGRNPYGYIPFSAGP----RNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
N + IP G C G+ + K L ++ + + ++ + L
Sbjct: 343 --EENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYS-LAR 399
Query: 794 LILRPQDGIRVRLFPR 809
+ P+ G + R
Sbjct: 400 MPSLPESGFVMSGIRR 415
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 209 bits (534), Expect = 1e-60
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H+T ++A+ W+ LLL + Q +V E A A +EA
Sbjct: 223 HETVASALTWSFLLLSHRPDWQKRVAESEEA---------------------ALAAFQEA 261
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LRLYP + R+L + L + LP T +++ Y R FP E + P RFL E
Sbjct: 262 LRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER 319
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ LR
Sbjct: 320 G--TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTLR 374
Query: 798 PQDGIRVRLFPR 809
P+ G+ R
Sbjct: 375 PEGGLPARPREE 386
Score = 209 bits (533), Expect = 2e-60
Identities = 58/296 (19%), Positives = 96/296 (32%), Gaps = 53/296 (17%)
Query: 86 GLNRIWLGGTPYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRR 145
+ L P I E E L T + YR + G GLLT G W + R
Sbjct: 32 PRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESWKEAR 91
Query: 146 KILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR 205
K L F + + + E +E++ GE ++ + +L ++ G
Sbjct: 92 KALKDPFLPKNVRGYREAMEEEARAFFGEWR----GEERDLDHEMLALSLRLLGRALFG- 146
Query: 206 KINAQGDSNSEYVKAVYE-LSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETI 264
+ + + L + + + L L + + + L
Sbjct: 147 -----KPLSPSLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYRE-------- 193
Query: 265 EDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSN 324
+ LI +L E E T + GH+T ++A+ W+ LLL
Sbjct: 194 -------------AEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHR 240
Query: 325 QEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
+ Q +V E A A +EALRLYP + R+L
Sbjct: 241 PDWQKRVAESEEA---------------------ALAAFQEALRLYPPAWILTRRL 275
Score = 158 bits (403), Expect = 1e-42
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 56/182 (30%)
Query: 415 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 474
A +EALRLYP + R+L + L + LP T +++ Y R FP E + P+
Sbjct: 256 AAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPE 313
Query: 475 RFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRN 534
RFL E
Sbjct: 314 RFLEERG---------------------------------------------------TP 322
Query: 535 PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGI 594
Y PF G R C+G+ FA+LE ++L RRFR++ + +L ++ LRP+ G+
Sbjct: 323 SGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---VLAQVTLRPEGGL 379
Query: 595 RV 596
Sbjct: 380 PA 381
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 211 bits (538), Expect = 3e-60
Identities = 84/584 (14%), Positives = 173/584 (29%), Gaps = 129/584 (22%)
Query: 25 LLTLSYFVVRRIKQSRLVKLINRIPGPT-SLPVLGNSIECNVDNQEVFNRIISSKR---L 80
T S RR ++ P +P LG+++E D + R+ ++ +
Sbjct: 3 KKTSSVLYGRRTRRRNE------PPLDKGMIPWLGHALEFGKDAAKFLTRM--KEKHGDI 54
Query: 81 FGHKKGLNRIWLGGTPYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHI 140
F + G + + + +L++ ++ ++S + + + N +L S
Sbjct: 55 F-------TVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYAQVLMKRIFNMILPSHNPE 107
Query: 141 WHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCE 200
++R + F L Q +L+ LC ++ +
Sbjct: 108 SEKKRAEMH--FQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCY-SLLFK 164
Query: 201 TAMGRKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTE 260
T A+ ++++ + E K L L + ++ A AR+
Sbjct: 165 TGYLTVFGAENNNSAALTQIYEEFRRFDKL----LPKLARTTVNKEEKQIAS-AAREKLW 219
Query: 261 DETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLL 320
+ + ++L ++ + + E R + ++ A W +
Sbjct: 220 KWLTPSGLDRKPREQSWLGSYVKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGY 279
Query: 321 LGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
L ++ E V EEI + ++ + E LRL + R
Sbjct: 280 LLTHPEALRAVREEI------QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT-RD- 331
Query: 381 GNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL 440
K + +E
Sbjct: 332 -------------------------VTQDKKICLSNGQE--------------------- 345
Query: 441 PDYVLPRDTEVIIVVY-NLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTE 499
Y L R + + + + DP++ +PE++ DRFL+ + +D
Sbjct: 346 --YHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDF------------ 391
Query: 500 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 559
R Y +P+ C G+ FA+ K
Sbjct: 392 ----------------------------FKNGARVKYPSVPWGTEDNLCPGRHFAVHAIK 423
Query: 560 VILANILRRFRVEAVDRRE-----DLTLLGELILRPQDGIRVMF 598
++ IL RF VE D+ D + G IL+P + + +
Sbjct: 424 ELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRY 467
Score = 167 bits (424), Expect = 1e-44
Identities = 45/212 (21%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
A W + L ++ E V EEI + ++ + E
Sbjct: 266 QGNAGPAAFWVMGYLLTHPEALRAVREEI------QGGKHLRLEERQKNTPVFDSVLWET 319
Query: 678 LRLYPSVPFIARKLSEDVPLPD-----YVLPRDTEVIIVVY-NLHRDAKVFPRPELYDPG 731
LRL + R +++D + Y L R + + + + D ++ +PE++
Sbjct: 320 LRLTAAALIT-RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFD 378
Query: 732 RFLSEN---------AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAV 782
RFL+ + R Y +P+ C G+ FA+ K ++ IL RF VE
Sbjct: 379 RFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELC 438
Query: 783 DRRE-----DLTLLGELILRPQDGIRVRLFPR 809
D+ D + G IL+P + +R R
Sbjct: 439 DKNATVPLVDPSRYGFGILQPAGDLEIRYRIR 470
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 208 bits (530), Expect = 6e-60
Identities = 54/559 (9%), Positives = 136/559 (24%), Gaps = 161/559 (28%)
Query: 48 IPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAENAE 107
+P ++ D +R + G + A+ AE
Sbjct: 1 MPKTPHTKGPDETLSLLADPYRFISRQC---QRLGAN--AFESRFLLKKTNCLKGAKAAE 55
Query: 108 PILNNSRTIHKSS-DYRYIEPWLG-NGLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQ 165
+ +R + + + LG G+ G R+++ + ++F+
Sbjct: 56 IFYDTTRFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFE 115
Query: 166 EQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGRKINAQGDSNSEYVKAVYE-- 223
+ V + + + VC A + + + + ++A+++
Sbjct: 116 AEWRRAVPGWTR---KGEIVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALFDAA 172
Query: 224 --LSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLL 281
S + + + +++ ++I +A + +
Sbjct: 173 GSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTA---------------AYAIA 217
Query: 282 IEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPK 341
+L ++ + + I + L + I+ + ++
Sbjct: 218 WHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQ------- 270
Query: 342 ASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPF 401
Y E ++E R YP P + + + F
Sbjct: 271 --------------PDYAELFVQEVRRFYPFFPAVVARA-----------------SQDF 299
Query: 402 TTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRD 461
P +V++ +Y + D
Sbjct: 300 E-------------------------------------WEGMAFPEGRQVVLDLYGSNHD 322
Query: 462 PEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 521
+ P+ + P+RF +
Sbjct: 323 AATWADPQEFRPERFRAW------------------------------------------ 340
Query: 522 PGRFLSENAAGRNPYGYIPFSAGP----RNCIGQKFAMLEEKVILANILRRFRVEAVDRR 577
+ + +IP G C G+ + KV ++ R + D+
Sbjct: 341 ----------DEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 390
Query: 578 EDLTLLGELILRPQDGIRV 596
+ L P+ G +
Sbjct: 391 LSID-FARLPALPKSGFVM 408
Score = 175 bits (446), Expect = 3e-48
Identities = 41/273 (15%), Positives = 82/273 (30%), Gaps = 36/273 (13%)
Query: 541 FSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGV 600
SA PR+ + + I + ++
Sbjct: 173 GSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYA--IAWHRDRHDDLL--S 228
Query: 601 DTSRDVAPVSPIWAPLRHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFT 660
V + + P + I + L + I+ + ++
Sbjct: 229 PHVAAVE-LVNVLRP--TVAIAVYITFVAHALQTCSGIRAALVQQ--------------- 270
Query: 661 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAK 720
Y E ++E R YP P + + S+D P +V++ +Y + DA
Sbjct: 271 ------PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAA 324
Query: 721 VFPRPELYDPGRFLSENAAGRNPYGYIPFSAGP----RNCIGQKFAMLEEKVILANILRR 776
+ P+ + P RF + + + +IP G C G+ + KV ++
Sbjct: 325 TWADPQEFRPERFRAW---DEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 381
Query: 777 FRVEAVDRREDLTLLGELILRPQDGIRVRLFPR 809
R + D+ + L P+ G +R
Sbjct: 382 MRYDVPDQDLSID-FARLPALPKSGFVMRNVHI 413
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 138 bits (349), Expect = 8e-35
Identities = 99/603 (16%), Positives = 189/603 (31%), Gaps = 180/603 (29%)
Query: 32 VVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIW 91
+ ++ KQ R + PGP LP +GN ++ + +++G + +
Sbjct: 1 MAKKTKQRRPMGFP---PGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGE---IFSLD 54
Query: 92 LGGTPYVFIHTAENAEPILNNSRTIHKSSDY--RYIEPWL-----GNGLLTS-AGHIWHQ 143
LGG V ++ + + L +H+S + R P GLL S G W
Sbjct: 55 LGGISTVVLNGYDVVKECL-----VHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVD 109
Query: 144 RRKILTPAF-HF----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIV 198
R++ +F +F + E + E+++ + G + +T +I
Sbjct: 110 HRRLAVNSFRYFGYGQKSFESKI---LEETKFFNDAIETYK-GRPFDFKQLITNAVSNIT 165
Query: 199 CETAMGR--------------KINAQGDSNSEYVKAVYE--------LSSLYKKHQRCLN 236
G + + + +Y +++ R
Sbjct: 166 NLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAA 225
Query: 237 TLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--LTDEN 294
++ F ++I + + + + + A+LD + + + + EN
Sbjct: 226 VVYDFLSRLIEKASVNR------KPQLPQHFVD------AYLDEMDQGKNDPSSTFSKEN 273
Query: 295 IREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFT 349
+ V + G +TT+ + W +L + IQ +V +EI P +
Sbjct: 274 LIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--------S 325
Query: 350 TRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNS 409
M Y EA + E LR VP
Sbjct: 326 WDDKCKMPYTEAVLHEVLRFCNIVPL---------------------------------- 351
Query: 410 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 469
+ SED + Y +P+ T VI +Y++H D + + PE
Sbjct: 352 ----------------GIF---HATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPE 392
Query: 470 LYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 529
++ P+RFL +
Sbjct: 393 VFHPERFLDSSGYF---------------------------------------------- 406
Query: 530 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA-VDRREDLTLLGELIL 588
+PFS G R+C+G+ A +E + +L+RF + + DL + L
Sbjct: 407 ---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTL 463
Query: 589 RPQ 591
+PQ
Sbjct: 464 QPQ 466
Score = 137 bits (348), Expect = 1e-34
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
+TT+ + W +L + IQ +V +EI P + M Y EA
Sbjct: 287 ETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--------SWDDKCKMPYTEAV 338
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+ E LR VP I SED + Y +P+ T VI +Y++H D K + PE++ P R
Sbjct: 339 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 398
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEA-VDRREDLTLL 791
FL + +PFS G R+C+G+ A +E + +L+RF + + DL
Sbjct: 399 FLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPR 458
Query: 792 GELILRPQDGIRVRLFPR 809
+ L+PQ + R
Sbjct: 459 LGMTLQPQP-YLICAERR 475
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 136 bits (345), Expect = 2e-34
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI-----VATSPKASSLKPFTTRSLNSMKYLEAC 673
TTS + W LLL+ + ++Q +V +EI P M Y A
Sbjct: 286 VTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRP--------EMGDQAHMPYTTAV 337
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E R VP + S D+ + + +P+ T +I + ++ +D V+ +P + P
Sbjct: 338 IHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEH 397
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
FL P ++PFSAG R C+G+ A +E + ++L+ F + + G
Sbjct: 398 FLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHG 457
Query: 793 E--LILRPQDGIRVRLFPR 809
++ P + PR
Sbjct: 458 VFAFLVSPSP-YELCAVPR 475
Score = 136 bits (344), Expect = 3e-34
Identities = 93/590 (15%), Positives = 167/590 (28%), Gaps = 183/590 (31%)
Query: 49 PGPTSLPVLGNSIECNVDN-QEVFNRIISSKRLFGHKKG-LNRIWLGGTPYVFIHTAENA 106
PGP LP LGN + + N F++ + G + + L TP V ++
Sbjct: 13 PGPLPLPGLGNLLHVDFQNTPYCFDQ-------LRRRFGDVFSLQLAWTPVVVLNGLAAV 65
Query: 107 -EPILNNS-----RTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAF-HF----R 155
E ++ + R + P L G W ++R+ + +
Sbjct: 66 REALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKK 125
Query: 156 ILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR---------- 205
LE +V E++ L G + +++ GR
Sbjct: 126 SLEQWV---TEEAACLCAAFANHS-GRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFL 181
Query: 206 ----KINAQGDSNSEYVKAVYE-------LSSLYKKHQRCLNTLHSFSYKVINERKAELK 254
S +++ V + +L K R + +++ E +
Sbjct: 182 RLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWD 241
Query: 255 ARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN------LTDENIREEVDTFMFEGHD 308
+ D + + E+ DEN+R V G
Sbjct: 242 PAQPPRD---------------LTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMV 286
Query: 309 TTSAAICWTLLLLGSNQEIQNKVYEEI-----VATSPKASSLKPFTTRSLNSMKYLEACI 363
TTS + W LLL+ + ++Q +V +EI P M Y A I
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRP--------EMGDQAHMPYTTAVI 338
Query: 364 KEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRL 423
E R VP
Sbjct: 339 HEVQRFGDIVPL------------------------------------------------ 350
Query: 424 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKL 483
V S D+ + + +P+ T +I + ++ +D V+ +P + P+ FL
Sbjct: 351 --GVT---HMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ--- 402
Query: 484 SEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
G F P ++PFSA
Sbjct: 403 ---------------------------------------GHF-------VKPEAFLPFSA 416
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE--LILRPQ 591
G R C+G+ A +E + ++L+ F + + G ++ P
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS 466
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 136 bits (344), Expect = 4e-34
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI--VATSPKASSLKPFTTRSLNSMKYLEACIKE 676
+TT++ + W + L + EIQ ++ EE+ + S + R+ + L A I E
Sbjct: 293 ETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRA--RLPLLNATIAE 350
Query: 677 ALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
LRL P VP + + + + Y +P VI + H D V+ +P + P RFL
Sbjct: 351 VLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE 410
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE-- 793
A + F G R C+G+ A LE V+LA +L+ F + +L +
Sbjct: 411 PGANPS----ALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPY 466
Query: 794 --LILRPQDGIRVRLFPR 809
+ L+ Q +VRL PR
Sbjct: 467 CGVNLKVQP-FQVRLQPR 483
Score = 124 bits (314), Expect = 3e-30
Identities = 95/624 (15%), Positives = 177/624 (28%), Gaps = 205/624 (32%)
Query: 21 TIALLLTLSYFVVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDN-QEVFNRIISSKR 79
LLL L+ + R ++ P++ + N + +++
Sbjct: 3 LAGLLLLLTLLAGAHLLWGR-----WKLRNLHLPPLVPGFLHLLQPNLPIHLLSL--TQK 55
Query: 80 ---LFGHKKGLNRIWLGGTPYVFIHTAENAEPILNNSRTIH-----KSSDY--R---YIE 126
++ R+ LG V +LN+ RTI K D+ R
Sbjct: 56 LGPVY-------RLRLGLQEVV----------VLNSKRTIEEAMIRKWVDFAGRPQIPSY 98
Query: 127 PWLGNG----LLTSAGHIWHQRRKILTPAFHF---RILEDFVEVFQEQSEVLVRRLGEVG 179
+ L +W +K+ A +E +V + ++ R+
Sbjct: 99 KLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWV---DQLTQEFCERMRVQA 155
Query: 180 VGESVNVFPYVTLCTLDIVCETAMGRK-----------INAQGDSNSEYVKAVYEL---- 224
G V + +L T I+C G K + + + + ++
Sbjct: 156 -GAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFL 214
Query: 225 ----SSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDL 280
+ + ++ + K + K + D D
Sbjct: 215 RFFPNPGLWRLKQAIENRDHMVEKQLRRHKESM------VAGQWRD----------MTDY 258
Query: 281 LIEASERHN-------LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYE 333
+++ R L + ++ V G +TT++ + W + L + EIQ ++ E
Sbjct: 259 MLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQE 318
Query: 334 EI--VATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVAT 391
E+ + S + R+ + L A I E LRL P VP
Sbjct: 319 ELDRELGPGASCSRVTYKDRA--RLPLLNATIAEVLRLRPVVPL---------------- 360
Query: 392 SSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEV 451
++P + + + Y +P V
Sbjct: 361 ----------------------------------ALP---HRTTRPSSIFGYDIPEGMVV 383
Query: 452 IIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDA 511
I + H D V+ +P + PDRFL A
Sbjct: 384 IPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----------------------------- 414
Query: 512 KVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRV 571
L F G R C+G+ A LE V+LA +L+ F +
Sbjct: 415 -----------PSAL-------------AFGCGARVCLGESLARLELFVVLARLLQAFTL 450
Query: 572 EAVDRREDLTLLGE----LILRPQ 591
+L + + L+ Q
Sbjct: 451 LPPPVGALPSLQPDPYCGVNLKVQ 474
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 132 bits (335), Expect = 7e-33
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
DT + AI W+L+ L + EIQ K+ +E+ P+ + R + YLEA
Sbjct: 296 DTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPR------LSDRP--QLPYLEAF 347
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E R +PF I + D L + +P+ V + + ++ D +++ P + P R
Sbjct: 348 ILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 733 FLSENAAGRN---PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLT 789
FL+ + N + F G R CIG+ A E + LA +L++ +
Sbjct: 408 FLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPP-GVKVD 466
Query: 790 LLGE--LILRPQDGIRVRLFPR 809
L L ++ R
Sbjct: 467 LTPIYGLTMKHAR-CEHVQARR 487
Score = 127 bits (322), Expect = 3e-31
Identities = 98/630 (15%), Positives = 191/630 (30%), Gaps = 215/630 (34%)
Query: 25 LLTLSYFVVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKR---LF 81
+ L R K + P P P+LG+ + + +R+ S+R +
Sbjct: 1 MAVLKGLRPRVPKGLKS------PPEPWGWPLLGHVLTLGKNPHLALSRM--SQRYGDVL 52
Query: 82 GHKKGLNRIWLGGTPYVFIHTAENAEPILNNSRTIH----KSSD----------YRYIEP 127
+I +G TP + +L+ TI + D I
Sbjct: 53 -------QIRIGSTPVL----------VLSRLDTIRQALVRQGDDFKGRPDLYTSTLITD 95
Query: 128 WLGNGLLTSAGHIWHQRRKI------------LTPAFHFRILEDFVEVFQEQSEVLVRRL 175
T +G +W RR++ + LE+ V ++++ L+ RL
Sbjct: 96 GQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHV---SKEAKALISRL 152
Query: 176 GEV-GVGESVNVFPYVTLCTLDIVCETAMGR-------KINAQGDSNSEYVKAV------ 221
E+ + + V + +++ G+ ++ + + E+V+
Sbjct: 153 QELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPL 212
Query: 222 -------YELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKR 274
Y + ++ + F K + E + + ++ D
Sbjct: 213 DFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDF------DKNSVRD-------- 258
Query: 275 PAFLDLLIEASERHN------LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQ 328
L + S++ + E I V+ G DT + AI W+L+ L + EIQ
Sbjct: 259 --ITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQ 316
Query: 329 NKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNK 383
K+ +E+ P+ + R + YLEA I E R +PF
Sbjct: 317 RKIQKELDTVIGRERRPR------LSDRP--QLPYLEAFILETFRHSSFLPF-------- 360
Query: 384 VYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDY 443
++P + D L +
Sbjct: 361 ------------------------------------------TIP---HSTTRDTTLNGF 375
Query: 444 VLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIV 503
+P+ V + + ++ DPE++ P + P+RFL+ + + PL +
Sbjct: 376 YIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTA-INKPLSEK----------- 423
Query: 504 VYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILA 563
+ F G R CIG+ A E + LA
Sbjct: 424 ----------------------------------MMLFGMGKRRCIGEVLAKWEIFLFLA 449
Query: 564 NILRRFRVEAVDRREDLTLLGE--LILRPQ 591
+L++ + L L ++
Sbjct: 450 ILLQQLEFSVPP-GVKVDLTPIYGLTMKHA 478
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 132 bits (334), Expect = 1e-32
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
+TT++ + WTL L N +++ K+YEEI +P + R+ + LEA
Sbjct: 287 ETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPT------ISDRN--RLLLLEAT 338
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I+E LRL P P I K + D + ++ + + TEVII ++ LH + K + +P+ + P R
Sbjct: 339 IREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPER 398
Query: 733 FLSEN--AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 790
FL+ Y+PF AGPR+CIG+ A E +I+A +L+RF +E D + +L
Sbjct: 399 FLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSL 458
Query: 791 LGE--LILRPQDGIRVRLFPR 809
G ++ +V++ R
Sbjct: 459 EGIPKVVFLIDS-FKVKIKVR 478
Score = 131 bits (331), Expect = 2e-32
Identities = 95/602 (15%), Positives = 193/602 (32%), Gaps = 202/602 (33%)
Query: 49 PGPTSLPVLGN--SIECNVDNQEVFNRIISSKR---LFGHKKGLNRIWLGGTPYVFIHTA 103
SLP++G+ + + F ++ K+ ++ + +G V
Sbjct: 11 KSLLSLPLVGSLPFLPRHGHMHNNFFKL--QKKYGPIY-------SVRMGTKTTV----- 56
Query: 104 ENAEPILNNSRTIH-----KSSDY--R---YIEPWLGNG----LLTSAGHIWHQRRKILT 149
I+ + + K D+ R N +G W R++
Sbjct: 57 -----IVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAM 111
Query: 150 PAF-HF----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMG 204
F F + LE + ++ L L G+S+++ V + +++
Sbjct: 112 ATFALFKDGDQKLEKII---CQEISTLCDMLATHN-GQSIDISFPVFVAVTNVISLICFN 167
Query: 205 R-------KINAQGDSNSEYVKAV-------------YELSSLYKKHQRCLNTLHSFSYK 244
++N + N + + + +K + + + K
Sbjct: 168 TSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNK 227
Query: 245 VINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEA--------SERHNLTDENIR 296
++ K + ++I + + + + + + L+D +I
Sbjct: 228 ILENYKEKF------RSDSITNMLD------TLMQAKMNSDNGNAGPDQDSELLSDNHIL 275
Query: 297 EEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTR 351
+ G +TT++ + WTL L N +++ K+YEEI +P + R
Sbjct: 276 TTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPT------ISDR 329
Query: 352 SLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMK 411
+ + LEA I+E LRL P P
Sbjct: 330 N--RLLLLEATIREVLRLRPVAPM------------------------------------ 351
Query: 412 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 471
+P K + D + ++ + + TEVII ++ LH + + + +P+ +
Sbjct: 352 --------------LIP---HKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQF 394
Query: 472 DPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAA 531
P+RFL+ +
Sbjct: 395 MPERFLNPAGTQ-----------------------------LISPSV------------- 412
Query: 532 GRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE--LILR 589
Y+PF AGPR+CIG+ A E +I+A +L+RF +E D + +L G ++
Sbjct: 413 -----SYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFL 467
Query: 590 PQ 591
Sbjct: 468 ID 469
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 131 bits (332), Expect = 1e-32
Identities = 96/597 (16%), Positives = 187/597 (31%), Gaps = 201/597 (33%)
Query: 49 PGPTSLPVLGNSIECNVDN-QEVFNRIISSKRLFGHKKG-LNRIWLGGTPYVFIHTAENA 106
PGP LP++GN + + N + F R + G + +++G V
Sbjct: 13 PGPFPLPIIGNLFQLELKNIPKSFTR-------LAQRFGPVFTLYVGSQRMV-------- 57
Query: 107 EPILNNSRTIH-----KSSDY--RYIEPWL----GNGLLTSAGHIWHQRRKILTPAF-HF 154
+++ + + ++ R P G++ + G W R+ ++
Sbjct: 58 --VMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNY 115
Query: 155 ----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR----- 205
+ E + Q ++ L+ L + G+ + + +++ + +
Sbjct: 116 GMGKQGNESRI---QREAHFLLEALRKTQ-GQPFDPTFLIGCAPCNVIADILFRKHFDYN 171
Query: 206 ---------KINAQGDSNSEYVKAVYE--------LSSLYKKHQRCLNTLHSFSYKVINE 248
N S +Y L ++K + + + + + + E
Sbjct: 172 DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKE 231
Query: 249 RKAELKARKNTEDETIEDPTEHVKKRPAFLD-LLIEASERHN-----LTDENIREEVDTF 302
L + D D LL+E + + T + I V
Sbjct: 232 HHQSL------DPNCPRD----------LTDCLLVEMEKEKHSAERLYTMDGITVTVADL 275
Query: 303 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMK 357
F G +TTS + + LL+L EI+ K++EEI V + P + M
Sbjct: 276 FFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP--------AIKDRQEMP 327
Query: 358 YLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACI 417
Y++A + E R VP
Sbjct: 328 YMDAVVHEIQRFITLVPS------------------------------------------ 345
Query: 418 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 477
++P + + D Y++P+ T V+ + ++ D + FP PE + P+ FL
Sbjct: 346 --------NLP---HEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFL 394
Query: 478 SENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYG 537
+EN G+F +
Sbjct: 395 NEN------------------------------------------GKF-------KYSDY 405
Query: 538 YIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE---LILRPQ 591
+ PFS G R C G+ A +E ++L IL+ F ++ + +D+ L P
Sbjct: 406 FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPP 462
Score = 130 bits (329), Expect = 3e-32
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMKYLEAC 673
+TTS + + LL+L EI+ K++EEI V + P + M Y++A
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP--------AIKDRQEMPYMDAV 332
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+ E R VP + + + D Y++P+ T V+ + ++ D + FP PE + P
Sbjct: 333 VHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEH 392
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
FL+EN + + PFS G R C G+ A +E ++L IL+ F ++ + +D+ L
Sbjct: 393 FLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSP 452
Query: 793 E---LILRPQDGIRVRLFPR 809
P ++ + PR
Sbjct: 453 IHIGFGCIPPR-YKLCVIPR 471
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 129 bits (327), Expect = 5e-32
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
+TTS + + LLLL + E+ KV EEI SP + + M Y +A
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--------CMQDRSHMPYTDAV 334
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+ E R +P + ++ D+ +Y++P+ T ++I + ++ D K FP PE++DP
Sbjct: 335 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 394
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
FL E + ++PFSAG R C+G+ A +E + L +IL+ F ++++ ++L
Sbjct: 395 FLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTP 454
Query: 793 E---LILRPQDGIRVRLFPR 809
P ++ P
Sbjct: 455 VVNGFASVPPF-YQLCFIPI 473
Score = 126 bits (318), Expect = 8e-31
Identities = 100/595 (16%), Positives = 186/595 (31%), Gaps = 196/595 (32%)
Query: 49 PGPTSLPVLGNSIECNVDN-QEVFNRIISSKRLFGHKKG-LNRIWLGGTPYVFIHTAE-- 104
PGPT LPV+GN ++ + + + G + ++ G P V +H E
Sbjct: 14 PGPTPLPVIGNILQIGIKDISKSLTN-------LSKVYGPVFTLYFGLKPIVVLHGYEAV 66
Query: 105 ------NAE-----PILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAF- 152
E I + ++ G G++ S G W + R+
Sbjct: 67 KEALIDLGEEFSGRGIFPLAERANR-----------GFGIVFSNGKKWKEIRRFSLMTLR 115
Query: 153 HF----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR--- 205
+F R +ED V QE++ LV L + + + +++C +
Sbjct: 116 NFGMGKRSIEDRV---QEEARCLVEELRKTK-ASPCDPTFILGCAPCNVICSIIFHKRFD 171
Query: 206 -----------KINAQGDSNSEYVKAVYE--------LSSLYKKHQRCLNTLHSFSYKVI 246
K+N S + + K + + + S+ + +
Sbjct: 172 YKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKV 231
Query: 247 NERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--LTDENIREEVDTFMF 304
E + + +D + FL + + T E++
Sbjct: 232 KEHQESMDM------NNPQDFID------CFLMKMEKEKHNQPSEFTIESLENTAVDLFG 279
Query: 305 EGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYL 359
G +TTS + + LLLL + E+ KV EEI SP + + M Y
Sbjct: 280 AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--------CMQDRSHMPYT 331
Query: 360 EACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKE 419
+A + E R +P
Sbjct: 332 DAVVHEVQRYIDLLPT-------------------------------------------- 347
Query: 420 ALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 479
S+P ++ D+ +Y++P+ T ++I + ++ D + FP +P+ F
Sbjct: 348 ------SLP---HAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFP-----NPEMF--- 390
Query: 480 NAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYI 539
DP FL E + ++
Sbjct: 391 -----------------------------------------DPHHFLDEGGNFKKSKYFM 409
Query: 540 PFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE---LILRPQ 591
PFSAG R C+G+ A +E + L +IL+ F ++++ ++L P
Sbjct: 410 PFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPP 464
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 129 bits (327), Expect = 7e-32
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEIVAT-----SPKASSLKPFTTRSLNSMKYLEAC 673
DT S A+ W LLL ++Q +V E+ P + ++ Y+ A
Sbjct: 293 DTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC------MGDQP--NLPYVLAF 344
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
+ EA+R VP I + + + Y +P+DT V + ++++ D +P PE +DP R
Sbjct: 345 LYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPAR 404
Query: 733 FLSENAAGR--NPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRRE-DLT 789
FL ++ + FS G R CIG++ + ++ + ++ + + A +
Sbjct: 405 FLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMN 464
Query: 790 LLGELILRPQDGIRVRLFPR 809
L ++P+ +V + R
Sbjct: 465 FSYGLTIKPKS-FKVNVTLR 483
Score = 128 bits (323), Expect = 2e-31
Identities = 91/624 (14%), Positives = 184/624 (29%), Gaps = 215/624 (34%)
Query: 33 VRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNQEVFNRIISSKR---LFGHKKGLNR 89
+ + S+ + PGP + P++GN+ F R+ ++R +F +
Sbjct: 1 MAKKTSSK-----GKPPGPFAWPLIGNAAAVGQAAHLSFARL--ARRYGDVF-------Q 46
Query: 90 IWLGGTPYVFIHTAENAEPILNNSRTIH----KSSD------YRYIEPWLGNG---LLTS 136
I LG P V +LN R IH + + G
Sbjct: 47 IRLGSCPIV----------VLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGH 96
Query: 137 AGHIWHQRRKILTPAF-HF--------RILEDFVEVFQEQSEVLVRRLGEVGV-GESVNV 186
W +R+ +F ++LE V ++ LV L G ++
Sbjct: 97 YSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHV---LSEARELVALLVRGSADGAFLDP 153
Query: 187 FPYVTLCTLDIVCETAMGR-------KINAQGDSNSEYVKA-----VYEL---------- 224
P + +++ G + N E+ + + ++
Sbjct: 154 RPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNP 213
Query: 225 -SSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIE 283
+++++ ++ +F L+ D +D I
Sbjct: 214 VRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRD---------------MMDAFIL 258
Query: 284 ASERHN----------LTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYE 333
++E+ L EN+ + DT S A+ W LLL ++Q +V
Sbjct: 259 SAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQA 318
Query: 334 EIVAT-----SPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEI 388
E+ P + ++ Y+ A + EA+R VP
Sbjct: 319 ELDQVVGRDRLPC------MGDQP--NLPYVLAFLYEAMRFSSFVPV------------- 357
Query: 389 VATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRD 448
++P + + + Y +P+D
Sbjct: 358 -------------------------------------TIP---HATTANTSVLGYHIPKD 377
Query: 449 TEVIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLH 508
T V + ++++ DP +P PE +DP RFL ++
Sbjct: 378 TVVFVNQWSVNHDPLKWPNPENFDPARFLDKD---------------------------- 409
Query: 509 RDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRR 568
G + + FS G R CIG++ + ++ + ++ + +
Sbjct: 410 --------------GLINKD-----LTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQ 450
Query: 569 FRVEAVDRRE-DLTLLGELILRPQ 591
A + L ++P+
Sbjct: 451 CDFRANPNEPAKMNFSYGLTIKPK 474
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 127 bits (322), Expect = 2e-31
Identities = 106/582 (18%), Positives = 184/582 (31%), Gaps = 191/582 (32%)
Query: 49 PGPTSLPVLGNSIECNVDN-QEVFNRIISSKRLFGHKKG-LNRIWLGGTPYVFIHTAENA 106
PGP+ LPVLGN ++ + F R K G + ++LG P V
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLR-------LREKYGDVFTVYLGSRPVV-------- 57
Query: 107 EPILNNSRTIH-----KSSDY--RYIEPWL-----GNGLLTSAGHIWHQRRKILTPAF-H 153
+L + I ++ + R + G G++ + G W R+
Sbjct: 58 --VLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRD 115
Query: 154 F----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR---- 205
F R +E+ + QE++ LV L + G ++ T +I+C G+
Sbjct: 116 FGMGKRSVEERI---QEEARCLVEELRKSK-GALLDNTLLFHSITSNIICSIVFGKRFDY 171
Query: 206 ----------KINAQGDSNSEYVKAVYE--------LSSLYKKHQRCLNTLHSFSYKVIN 247
S + V+E +++ R L +++F + +
Sbjct: 172 KDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVE 231
Query: 248 ERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--LTDENIREEVDTFMFE 305
+ +A L + D + +L + + + +N+ V + F
Sbjct: 232 KHRATL------DPSNPRDFID------VYLLRMEKDKSDPSSEFHHQNLILTVLSLFFA 279
Query: 306 GHDTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMKYLE 360
G +TTS + + LL+ + +V +EI V P M Y +
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPP--------ALDDRAKMPYTD 331
Query: 361 ACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEA 420
A I E RL +PF
Sbjct: 332 AVIHEIQRLGDLIPF--------------------------------------------- 346
Query: 421 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN 480
VP +++D YV+P++TEV V+ + DP F P ++P FL N
Sbjct: 347 -----GVP---HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398
Query: 481 AKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIP 540
G + G++P
Sbjct: 399 ------------------------------------------GAL-------KRNEGFMP 409
Query: 541 FSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
FS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 410 FSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDL 451
Score = 126 bits (320), Expect = 4e-31
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMKYLEAC 673
+TTS + + LL+ + +V +EI V P M Y +A
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPP--------ALDDRAKMPYTDAV 333
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E RL +PF + +++D YV+P++TEV V+ + D + F P ++PG
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
FL N A + G++PFS G R C+G+ A E + IL+ F + + ED+ L
Sbjct: 394 FLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTP 453
Query: 793 E---LILRPQDGIRVRLFPR 809
+ P ++R R
Sbjct: 454 RESGVGNVPPS-YQIRFLAR 472
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 126 bits (318), Expect = 7e-31
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 619 DTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMKYLEAC 673
+T S + + LLL + E++ KV+EEI V P M Y+EA
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQP--------KFEDRAKMPYMEAV 333
Query: 674 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR 732
I E R +P +AR++ +D D+ LP+ TEV ++ ++ RD F P+ ++P
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 733 FLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG 792
FL+E + ++PFS G RNC G+ A +E + +++ FR+++ +D+ +
Sbjct: 394 FLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
Query: 793 E---LILRPQDGIRVRLFPR 809
+ P++ + PR
Sbjct: 454 KHVGFATIPRN-YTMSFLPR 472
Score = 126 bits (318), Expect = 8e-31
Identities = 102/581 (17%), Positives = 188/581 (32%), Gaps = 189/581 (32%)
Query: 49 PGPTSLPVLGNSIECNVDNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIHTAE---- 104
PGPT LP +GN ++ ++ ++++N ++ +G + I LG V + +
Sbjct: 13 PGPTPLPFIGNYLQ--LNTEQMYNSLMKISERYGP---VFTIHLGPRRVVVLCGHDAVRE 67
Query: 105 ----NAE-----PILNNSRTIHKSSDYRYIEPWLGNGLLTSAGHIWHQRRKILTPAF-HF 154
AE + K G G++ S G Q R+ F
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFK-----------GYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 155 ----RILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTLDIVCETAMGR----- 205
R +E+ + QE++ L+ L G G +++ +++ +++ G
Sbjct: 117 GVGKRGIEERI---QEEAGFLIDALRGTG-GANIDPTFFLSRTVSNVISSIVFGDRFDYK 172
Query: 206 ---------KINAQGDSNSEYVKAVYE--------LSSLYKKHQRCLNTLHSFSYKVINE 248
+ S +YE L ++ + L L F K +
Sbjct: 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 249 RKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHN--LTDENIREEVDTFMFEG 306
+ L + + D + +FL + E + N +N+ G
Sbjct: 233 NQRTL------DPNSPRDFID------SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGG 280
Query: 307 HDTTSAAICWTLLLLGSNQEIQNKVYEEI--V---ATSPKASSLKPFTTRSLNSMKYLEA 361
+T S + + LLL + E++ KV+EEI V P M Y+EA
Sbjct: 281 TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQP--------KFEDRAKMPYMEA 332
Query: 362 CIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEAL 421
I E R +P
Sbjct: 333 VIHEIQRFGDVIPM---------------------------------------------- 346
Query: 422 RLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENA 481
S+ R++ +D D+ LP+ TEV ++ ++ RDP F +P F
Sbjct: 347 ----SLA---RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS-----NPQDF----- 389
Query: 482 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPF 541
+P FL+E + ++PF
Sbjct: 390 ---------------------------------------NPQHFLNEKGQFKKSDAFVPF 410
Query: 542 SAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTL 582
S G RNC G+ A +E + +++ FR+++ +D+ +
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 73.1 bits (180), Expect = 1e-13
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+ + + L +N E N V + RSL + I E
Sbjct: 271 TEPADKTLALMIYHLLNNPEQMNDVLAD----------------RSL-----VPRAIAET 309
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGR-FLSE 736
LR P V I R+LS+D + + +DT V ++ +RD + F +P++++ R L
Sbjct: 310 LRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGI 369
Query: 737 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
+A ++ F +G NC+G FA E +++ +L + R ++ L +
Sbjct: 370 KSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMR--------NIRLEEDF-C 420
Query: 797 RPQDGIRVR 805
+ G+ R
Sbjct: 421 YAESGLYTR 429
Score = 58.9 bits (143), Expect = 4e-09
Identities = 39/173 (22%), Positives = 60/173 (34%), Gaps = 53/173 (30%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 476
I E LR P V I R+LS+D + + +DT V ++ +RDPE F PD F
Sbjct: 306 IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFE-----QPDVF 360
Query: 477 LSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPY 536
N+HR+ + + R L+
Sbjct: 361 -----------------------------NIHRE-DLGIKSAFSGAARHLA--------- 381
Query: 537 GYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
F +G NC+G FA E +++ +L + R + L G
Sbjct: 382 ----FGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDFCYAESGLYTRG 430
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 72.7 bits (179), Expect = 1e-13
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 38/186 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DTT I + L + ++ + SL +EA
Sbjct: 253 LDTTVNGIAAAVYCLARFPDEFARLRAD----------------PSL-----ARNAFEEA 291
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R V R + DV L + +V++ + + +RD + + P+ YD R
Sbjct: 292 VRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR----- 346
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
G++ F +G C+GQ A LE +V+LA + R+ + + G L R
Sbjct: 347 ----KTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVA--------AIEIAGPLKRR 394
Query: 798 PQDGIR 803
+ +R
Sbjct: 395 FNNTLR 400
Score = 57.6 bits (140), Expect = 7e-09
Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 66/177 (37%)
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLS 478
EA+R V R + DV L + +V++ + + +RDP + DPDR+
Sbjct: 290 EAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWD-----DPDRY-- 342
Query: 479 ENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGY 538
D+ R G+
Sbjct: 343 -------DI--------------------------------------------TRKTSGH 351
Query: 539 IPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
+ F +G C+GQ A LE +V+LA + R+ + + G L R + +R
Sbjct: 352 VGFGSGVHMCVGQLVARLEGEVVLAALARKVA--------AIEIAGPLKRRFNNTLR 400
Score = 40.3 bits (95), Expect = 0.002
Identities = 31/206 (15%), Positives = 52/206 (25%), Gaps = 78/206 (37%)
Query: 273 KRPA---FLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQN 329
A F + S+ +T E V + + G DTT I + L +
Sbjct: 216 PNLAPGGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFA 275
Query: 330 KVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIV 389
++ + SL +EA+R V R
Sbjct: 276 RLRAD----------------PSL-----ARNAFEEAVRFESPVQTFFR----------T 304
Query: 390 ATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDT 449
T DV L +
Sbjct: 305 TT--------------------------------------------RDVELAGATIGEGE 320
Query: 450 EVIIVVYNLHRDPEVFPRPELYDPDR 475
+V++ + + +RDP + P+ YD R
Sbjct: 321 KVLMFLGSANRDPRRWDDPDRYDITR 346
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 72.3 bits (178), Expect = 2e-13
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 23/146 (15%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
A I+E +R P V ++R +D+ + + +P+ +++++ HRD + P+ +D
Sbjct: 289 ASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLT 789
P R ++ F G C+G A LE V L + RF +
Sbjct: 349 P---------DRAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFP--------EAR 391
Query: 790 LLGELILRPQDGIR------VRLFPR 809
L GE + +R + +
Sbjct: 392 LSGEPEYKRNLTLRGMSTLSIAVHHH 417
Score = 55.8 bits (135), Expect = 3e-08
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
A I+E +R P V ++R +D+ + + +P+ +++++ HRDP + P+ +D
Sbjct: 289 ASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 473 PDR 475
PDR
Sbjct: 349 PDR 351
Score = 55.0 bits (133), Expect = 5e-08
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
+D+ + + +P+ +++++ HRD + P+ +DP R ++ F G
Sbjct: 312 DDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR---------AQIRHLGFGKG 362
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
C+G A LE V L + RF + L GE + +R
Sbjct: 363 AHFCLGAPLARLEATVALPALAARFP--------EARLSGEPEYKRNLTLR 405
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.3 bits (179), Expect = 2e-13
Identities = 70/579 (12%), Positives = 156/579 (26%), Gaps = 189/579 (32%)
Query: 358 YLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKAS-SLKPFTTIRSLNSMKYLEAC 416
+ +A + L + + I+ + S +L+ F T+ S +
Sbjct: 25 FEDAFVDN-FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV-QKF 82
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVY-----NLHRDPEVF-----P 466
++E LR + F+ + + R ++ +Y L+ D +VF
Sbjct: 83 VEEVLR--INYKFLMSPIKTE--------QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132
Query: 467 RPELYDPDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVY------------NLHRDAKVF 514
R + Y R L E P + +++ ++ KV
Sbjct: 133 RLQPYLKLR-----QALLELRPAKN----------VLIDGVLGSGKTWVALDVCLSYKV- 176
Query: 515 PRPELYDPGRFLSENAAGRNPYG--YIPFSAGPRNCIGQKFAMLE--------EKVILAN 564
+ + ++ + N ML+ ++
Sbjct: 177 ----------------QCKMDFKIFWL--NLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 565 ILRRFRVEAVDRREDL-TLLGE-------LILRPQDGI---RV--MFGVD-----TSRDV 606
++ + +L LL L+L + + F + T+R
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---LNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 607 APVSPIWAPLRHDTTSAAICWTLL------LLGS--NQEIQNKVYEEIVATSPK-----A 653
+ A + TL LL + Q + E++ T+P+ A
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-DLPREVLTTNPRRLSIIA 334
Query: 654 SSLKPFTTRSLNSMKY--------LEACIK-----EALRLYPSVPFIARKLSEDVPLPDY 700
S++ N +E+ + E +++ + + +P
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL-SV---FPPSAHIPTI 390
Query: 701 VL--------PRDTEVI------------------IVVYNLHRDAKVFP--RPEL----- 727
+L D V+ I + +++ + KV L
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV 450
Query: 728 --YDPGRFLSENAAGRNP-----YGYIPF---SAGPRNCIGQKFAM----------LEEK 767
Y+ + + Y +I + ++ + LE+K
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH----PERMTLFRMVFLDFRFLEQK 506
Query: 768 VILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVRL 806
+ + ++ + L I D RL
Sbjct: 507 IRHDSTAWNASGSILNTLQQLKFYKPYI-CDNDPKYERL 544
Score = 62.6 bits (151), Expect = 4e-10
Identities = 57/410 (13%), Positives = 116/410 (28%), Gaps = 118/410 (28%)
Query: 38 QSRLVKLINRIPGPTSLPVLGN----------SIECNV----DNQEVFNRIISSKR---- 79
Q+ L +L+ P L VL N ++ C + ++V + + ++
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 80 LFGHKKGLNRIWLGGTPYVFIHTAENAEPILNNSRTIH-KSSDYRYIEPWLGNGLLTS-- 136
L H L T + + +L + + + D E N S
Sbjct: 291 LDHHSMTL--------------TPDEVKSLL--LKYLDCRPQDLP-REVLTTNPRRLSII 333
Query: 137 ------AGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGV-GESVNVFPY 189
W + + I+E + V + + + V S ++ P
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLT-TIIESSLNVL--EPAEYRKMFDRLSVFPPSAHI-PT 389
Query: 190 VTLCTL----------DIVCETAMGRKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLH 239
+ L + +V + + + + E ++ + K LH
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNK--LHKYSLVEKQPK-ESTISIPSIYLELKVKLENEYALH 446
Query: 240 SFSYKVINERKAELKARKNTEDETIED------------PTEHVKK----RPAFLDL-LI 282
+++ + D EH ++ R FLD +
Sbjct: 447 R---SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503
Query: 283 EASERHNLTDENIREEV-DTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPK 341
E RH+ T N + +T Q K Y+ + +
Sbjct: 504 EQKIRHDSTAWNASGSILNTL------------------------QQLKFYKPYICDN-- 537
Query: 342 ASSLKPFTTRSLNS-MKYLEACIKEALRLYPSVPFIARKLGNK---VYEE 387
P R +N+ + +L +E L + L + ++EE
Sbjct: 538 ----DPKYERLVNAILDFLPKI-EENLICSKYTDLLRIALMAEDEAIFEE 582
Score = 32.9 bits (74), Expect = 0.60
Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 24/155 (15%)
Query: 664 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLP--RDTEVIIVVYNLHRDAKV 721
+Y K+ L ++ F+ +DV D E+ ++ + +
Sbjct: 11 TGEHQY---QYKDILSVFED-AFVDNFDCKDVQ--DMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 722 F--------PRPELYDPGRFLSENAAGRNPYGYI--PFSAGPRNCIGQKFAMLEEKVILA 771
+ E+ +F+ E N Y ++ P R +E++ L
Sbjct: 65 LRLFWTLLSKQEEMVQ--KFV-EEVLRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 772 NILRRFRVEAVDRREDLTLLGE--LILRPQDGIRV 804
N + F V R + L + L LRP + +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI 155
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 71.1 bits (175), Expect = 3e-13
Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 36/186 (19%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H I + L E+ + S A I E
Sbjct: 235 HMAIGYLIASGIELFARRPEVFTAFRND----------------ESA-----RAAIINEM 273
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R+ P R +EDV + ++ + + ++ +RD +VF P+++D R + +
Sbjct: 274 VRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAAS 333
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
+ F GP +C GQ + E + A + R+ + L E +
Sbjct: 334 -------RNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE--------RIELAEEPTVA 378
Query: 798 PQDGIR 803
D R
Sbjct: 379 HNDFAR 384
Score = 58.0 bits (141), Expect = 5e-09
Identities = 34/183 (18%), Positives = 55/183 (30%), Gaps = 64/183 (34%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
A I E +R+ P R +EDV + ++ + + ++ +RDPEVF D
Sbjct: 266 RAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFD-----D 320
Query: 473 PDRFLSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAG 532
PD F D R + +
Sbjct: 321 PDVF--------------------------------------------DHTRPPAAS--- 333
Query: 533 RNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQD 592
+ F GP +C GQ + E + A + R+ + L E + D
Sbjct: 334 ----RNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE--------RIELAEEPTVAHND 381
Query: 593 GIR 595
R
Sbjct: 382 FAR 384
Score = 42.6 bits (101), Expect = 3e-04
Identities = 32/207 (15%), Positives = 56/207 (27%), Gaps = 75/207 (36%)
Query: 278 LDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVA 337
D L++A+ +T+ + F GH I + L E+ +
Sbjct: 206 ADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND--- 262
Query: 338 TSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSKASS 397
S A I E +R+ P R T
Sbjct: 263 -------------ESA-----RAAIINEMVRMDPPQLSFLR----------FPT------ 288
Query: 398 LKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYN 457
EDV + ++ + + ++
Sbjct: 289 --------------------------------------EDVEIGGVLIEAGSPIRFMIGA 310
Query: 458 LHRDPEVFPRPELYDPDRFLSENAKLS 484
+RDPEVF P+++D R + + LS
Sbjct: 311 ANRDPEVFDDPDVFDHTRPPAASRNLS 337
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 70.1 bits (172), Expect = 7e-13
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 676 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
E LRL+P++ R + +V L ++V+ EV++VV +RD +VF P+ D
Sbjct: 261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDV----- 315
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTL 790
R + ++ L + V RR L
Sbjct: 316 ----DRPDADRALSAHRGHPGRLEELVTALATAALRAAAKALPGLTPSGPVVRRRRSPVL 371
Query: 791 LG 792
G
Sbjct: 372 RG 373
Score = 58.1 bits (141), Expect = 5e-09
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 14/105 (13%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
+V L ++V+ EV++VV +RD +VF P+ D R +
Sbjct: 278 AEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDV---------DRPDADRALSAHR 328
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
++ L + V RR L G
Sbjct: 329 GHPGRLEELVTALATAALRAAAKALPGLTPSGPVVRRRRSPVLRG 373
Score = 53.1 bits (128), Expect = 2e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LRL+P++ R + +V L ++V+ EV++VV +RDPEVF P+ D DR
Sbjct: 261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR 317
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 69.6 bits (171), Expect = 1e-12
Identities = 37/188 (19%), Positives = 62/188 (32%), Gaps = 36/188 (19%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
H TT+ + + L + + E+ + A ++E
Sbjct: 243 HITTTVLLGNIVRTLDEHPAHWDAAAED----------------PGR-----IPAIVEEV 281
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR P P + R ++ + +P D V V + +RD+ P+ +DP R
Sbjct: 282 LRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR----- 336
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
+ F G C+G A LE +V L I+ RF LT+ +
Sbjct: 337 --KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFG--------RLTVDRDDERL 386
Query: 798 PQDGIRVR 805
V
Sbjct: 387 RHFEQIVL 394
Score = 54.2 bits (131), Expect = 1e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++E LR P P + R ++ + +P D V V + +RD + P+ +DP R
Sbjct: 278 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 68.8 bits (169), Expect = 2e-12
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR P++P R +ED + +P T V + + HRD +VF + +D
Sbjct: 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV-- 349
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGEL 794
+ I F GP C+G A LE +A + R + GE+
Sbjct: 350 ------KREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD--------PPQIAGEI 395
Query: 795 ILRPQDGIR 803
R + G+
Sbjct: 396 TWRHELGVA 404
Score = 60.7 bits (148), Expect = 8e-10
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 16/111 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED + +P T V + + HRD +VF + +D + I F G
Sbjct: 310 EDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV--------KREAPSIAFGGG 361
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
P C+G A LE +A + R + GE+ R + G+
Sbjct: 362 PHFCLGTALARLELTEAVAALATRLD--------PPQIAGEITWRHELGVA 404
Score = 46.9 bits (112), Expect = 2e-05
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR P++P R +ED + +P T V + + HRDP VF + +D
Sbjct: 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV 349
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 67.3 bits (165), Expect = 5e-12
Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 31/178 (17%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
D T+ + L + E++ ++ L + + E
Sbjct: 234 IDNTARFLSSVFWRLAWDIELRRRLIAH----------------PEL-----IPNAVDEL 272
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR Y R ++++V + D + ++ RD F P+
Sbjct: 273 LRFYGPAMV-GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVI------- 324
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
R P ++ G C+G +E +V + L+R ++D ++ L +
Sbjct: 325 --ERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLMGQV 380
Score = 50.7 bits (122), Expect = 1e-06
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 9/103 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
++V + D + ++ RD F P+ R P ++ G
Sbjct: 287 QEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER---------TPNRHLSLGHG 337
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 587
C+G +E +V + L+R ++D ++ L +
Sbjct: 338 IHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLMGQV 380
Score = 48.8 bits (117), Expect = 4e-06
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
+ E LR Y R ++++V + D + ++ RD F P+ +R
Sbjct: 269 VDELLRFYGPAMV-GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER 326
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 66.9 bits (164), Expect = 9e-12
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
+ ++E LR AR SED+ + + + +V +++ +RD +F P+++D
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLT 789
R+P ++ F G C+G A LE ++ + +L+R L
Sbjct: 327 I---------TRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM--------PSLN 369
Query: 790 LLG-ELILRPQDGIR 803
L E RP G R
Sbjct: 370 LADFEWRYRPLFGFR 384
Score = 53.8 bits (130), Expect = 1e-07
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
+ ++E LR AR SED+ + + + +V +++ +RDP +F P+++D
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 473 PDR 475
R
Sbjct: 327 ITR 329
Score = 52.6 bits (127), Expect = 3e-07
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 18/112 (16%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ + + + +V +++ +RD +F P+++D R+P ++ F G
Sbjct: 290 EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDI---------TRSPNPHLSFGHG 340
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLG-ELILRPQDGIR 595
C+G A LE ++ + +L+R L L E RP G R
Sbjct: 341 HHVCLGSSLARLEAQIAINTLLQRM--------PSLNLADFEWRYRPLFGFR 384
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 66.5 bits (163), Expect = 1e-11
Identities = 41/196 (20%), Positives = 69/196 (35%), Gaps = 37/196 (18%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+TT + L N++ + + + SL L I+E
Sbjct: 232 DETTRHTLSGGTEQLLRNRDQWDLLQRD----------------PSL-----LPGAIEEM 270
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR V + R L+ D L +++++ + + D VF PE +D
Sbjct: 271 LRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDV------- 323
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELIL 796
RNP ++ F G C+G + A LE ++ +LRR + V L L +
Sbjct: 324 --QRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFV 381
Query: 797 RPQDGIR---VRLFPR 809
G+ V P
Sbjct: 382 S---GLESMPVVFTPS 394
Score = 50.7 bits (122), Expect = 1e-06
Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 59/174 (33%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 476
I+E LR V + R L+ D L +++++ + + D VF +P++F
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFC-----EPEKF 321
Query: 477 LSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPY 536
DV RNP
Sbjct: 322 ---------DV--------------------------------------------QRNPN 328
Query: 537 GYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 589
++ F G C+G + A LE ++ +LRR + V L L +
Sbjct: 329 SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVS 382
Score = 35.3 bits (82), Expect = 0.083
Identities = 31/201 (15%), Positives = 54/201 (26%), Gaps = 79/201 (39%)
Query: 279 DL---LIEASER-HNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEE 334
DL L+ + L+D+ + E + G +TT + L N++ + + +
Sbjct: 200 DLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD 259
Query: 335 IVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATSSK 394
SL L I+E LR V + R V T
Sbjct: 260 ----------------PSL-----LPGAIEEMLRWTAPVKNMCR----------VLT--- 285
Query: 395 ASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIV 454
D L +++++
Sbjct: 286 -----------------------------------------ADTEFHGTALCAGEKMMLL 304
Query: 455 VYNLHRDPEVFPRPELYDPDR 475
+ + D VF PE +D R
Sbjct: 305 FESANFDEAVFCEPEKFDVQR 325
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 66.6 bits (163), Expect = 1e-11
Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 44/198 (22%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TT AI + L + + + + + ++ ++E
Sbjct: 256 NETTRHAITGAVHALATVPGLLTALRDG----------------SAD-----VDTVVEEV 294
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR + R + DV + LP T V+ + +RD F P+ + P
Sbjct: 295 LRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLP------- 347
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
GR P +I F G +C+G A +E V+L + R + L E
Sbjct: 348 --GRKPNRHITFGHGMHHCLGSALARIELSVVLRVLAERV--------SRVDLEREPAWL 397
Query: 798 PQDGIR------VRLFPR 809
++ VR R
Sbjct: 398 RAIVVQGYRELPVRFTGR 415
Score = 52.3 bits (126), Expect = 4e-07
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 17/111 (15%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
DV + LP T V+ + +RD F P+ + PGR P +I F G
Sbjct: 310 ADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR---------KPNRHITFGHG 360
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
+C+G A +E V+L + R + L E ++
Sbjct: 361 MHHCLGSALARIELSVVLRVLAERV--------SRVDLEREPAWLRAIVVQ 403
Score = 46.2 bits (110), Expect = 3e-05
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
++ ++E LR + R + DV + LP T V+ + +RDP F P+ +
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 473 PDR 475
P R
Sbjct: 347 PGR 349
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 66.6 bits (163), Expect = 1e-11
Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 36/180 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT + + ++ L + E ++ E L+ ++E
Sbjct: 258 LDTVVNFLGFMMIYLSRHPETVAEMRRE----------------PLK-----LQRGVEEL 296
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R + V AR + D+ +L +++ D + P D
Sbjct: 297 FRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDL------- 348
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 792
R + F+ GP C G A LE V+L L R AV +
Sbjct: 349 --SRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAA 406
Score = 49.6 bits (119), Expect = 3e-06
Identities = 20/105 (19%), Positives = 30/105 (28%), Gaps = 14/105 (13%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D+ +L +++ D + P D R + F+ G
Sbjct: 311 SDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR---------RDVTHSTFAQG 361
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
P C G A LE V+L L R AV +
Sbjct: 362 PHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAA 406
Score = 47.3 bits (113), Expect = 1e-05
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++E R + V AR + D+ +L +++ D P D R
Sbjct: 293 VEELFRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR 350
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 65.8 bits (161), Expect = 2e-11
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
A ++E +R P V + R ED+ L D+ +PR + V+ ++ + +RD FP P++ D
Sbjct: 287 TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDR 784
R + F G C+G A E ++ L +L V+
Sbjct: 347 V---------HRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALGRGAHEVEY 397
Query: 785 REDLTLLG 792
+D+ G
Sbjct: 398 ADDMVFHG 405
Score = 53.4 bits (129), Expect = 2e-07
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
A ++E +R P V + R ED+ L D+ +PR + V+ ++ + +RDP FP P++ D
Sbjct: 287 TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 473 PDR 475
R
Sbjct: 347 VHR 349
Score = 51.5 bits (124), Expect = 7e-07
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ L D+ +PR + V+ ++ + +RD FP P++ D R + F G
Sbjct: 310 EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDV---------HRAAERQVGFGLG 360
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
C+G A E ++ L +L V+ +D+ G
Sbjct: 361 IHYCLGATLARAEAEIGLRALLDGIPALGRGAHEVEYADDMVFHG 405
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 65.8 bits (161), Expect = 2e-11
Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 38/196 (19%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+DT + + ++ LL + + + ++ + ++E
Sbjct: 252 NDTVTGMLGGSMPLLHRRPDQRRLLLDD----------------PEG-----IPDAVEEL 290
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVF-PRPELYDPGRFLSE 736
LRL V +AR + DV + D +P V+++ + +RD + + P D R
Sbjct: 291 LRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTR---- 346
Query: 737 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
P + FS G +C+G A ++ +V L +L R V + G +
Sbjct: 347 -----CPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVA-ESRIVWSGGSYV 400
Query: 797 RPQDGIR---VRLFPR 809
R R+
Sbjct: 401 R---RPLSVPFRVTSS 413
Score = 51.5 bits (124), Expect = 6e-07
Identities = 32/173 (18%), Positives = 53/173 (30%), Gaps = 58/173 (33%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 476
++E LRL V +AR + DV + D +P V+++ + +RD + D
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGP----DAAEL 342
Query: 477 LSENAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPY 536
DV R P
Sbjct: 343 ---------DV--------------------------------------------TRCPR 349
Query: 537 GYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 589
+ FS G +C+G A ++ +V L +L R V + G +R
Sbjct: 350 NILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVA-ESRIVWSGGSYVR 401
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 64.9 bits (159), Expect = 2e-11
Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 40/181 (22%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TT+ I + ++ N + + ++ + ++E
Sbjct: 190 NETTTNLIGNMIRVIDENPD----IIDDALKNRSGF--------------------VEET 225
Query: 678 LRLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSE 736
LR Y + R +ED + + + + +VI+ + + +RD F P+L+ GR
Sbjct: 226 LRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR---- 281
Query: 737 NAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLL 791
R ++ F G C+G A LE + L +IL F+ + ++ +L
Sbjct: 282 ----REM--HLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVL 335
Query: 792 G 792
G
Sbjct: 336 G 336
Score = 49.5 bits (119), Expect = 3e-06
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED + + + + +VI+ + + +RD F P+L+ GR R ++ F G
Sbjct: 242 EDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR--------REM--HLAFGIG 291
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
C+G A LE + L +IL F+ + ++ +LG
Sbjct: 292 IHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVLG 336
Score = 47.6 bits (114), Expect = 9e-06
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 417 IKEALRLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++E LR Y + R +ED + + + + +VI+ + + +RD F P+L+ R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 65.0 bits (159), Expect = 4e-11
Identities = 35/180 (19%), Positives = 52/180 (28%), Gaps = 34/180 (18%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT +A I L L + E Q + E L + A E
Sbjct: 236 LDTVAAMIGMVALHLARHPEDQRLLRER----------------PDL-----IPAAADEL 274
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R YP+V +R DV + + V + + D F PE R
Sbjct: 275 MRRYPTVAV-SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR----- 328
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 792
G P + G C+G A +E V L L + + +
Sbjct: 329 --GLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNVGA 386
Score = 51.5 bits (124), Expect = 7e-07
Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 12/105 (11%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
DV + + V + + D F PE R G P + G
Sbjct: 289 ADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR-------GLAPIRHTTMGVG 341
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
C+G A +E V L L + + +
Sbjct: 342 AHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNVGA 386
Score = 48.4 bits (116), Expect = 5e-06
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLS 478
E +R YP+V +R DV + + V + + DP F PE DR L+
Sbjct: 273 ELMRRYPTVAV-SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA 331
Query: 479 ENAKLS 484
+
Sbjct: 332 PIRHTT 337
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 65.0 bits (159), Expect = 4e-11
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 18/135 (13%)
Query: 670 LEACIKEALRLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELY 728
+ + E LR + R +D+ + + V +++ + RD VF RP+++
Sbjct: 287 MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 729 DPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDL 788
D R+ + + GP C G A LE ++ + I RRF ++
Sbjct: 347 DV---------RRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFP--------EM 389
Query: 789 TLLGELILRPQDGIR 803
L + R
Sbjct: 390 KLKETPVFGYHPAFR 404
Score = 55.7 bits (135), Expect = 3e-08
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 17/111 (15%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
+D+ + + V +++ + RD VF RP+++D R+ + + G
Sbjct: 311 QDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDV---------RRDTSASLAYGRG 361
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
P C G A LE ++ + I RRF ++ L + R
Sbjct: 362 PHVCPGVSLARLEAEIAVGTIFRRFP--------EMKLKETPVFGYHPAFR 404
Score = 50.0 bits (120), Expect = 2e-06
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 413 LEACIKEALRLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 471
+ + E LR + R +D+ + + V +++ + RD VF RP+++
Sbjct: 287 MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 472 DPDR 475
D R
Sbjct: 347 DVRR 350
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 63.7 bits (156), Expect = 7e-11
Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TT+ I + ++ + +L + ++EA
Sbjct: 212 NETTTNLIGNAIEDF-----TLYNSWDYVREK------------GALKA-------VEEA 247
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR P V R E V + D V+ V + + + +RD +VF P+ + P R
Sbjct: 248 LRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR----- 302
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLG 792
P ++ F +G C+G A LE ++ L ++F + ++ ++ L G
Sbjct: 303 ----TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNG 356
Score = 51.0 bits (123), Expect = 9e-07
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++EALR P V R E V + D V+ V + + + +RD EVF P+ + PDR
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 63.8 bits (156), Expect = 8e-11
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 676 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
E LR R +E+V + +P+ + V++ +RD K FP P +D
Sbjct: 280 EILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDV----- 334
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGEL 794
R+ G++ F G C+G+ A LE +V L + RF + +D+ L
Sbjct: 335 ----TRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSL 390
Query: 795 ILRPQDGIRVRL 806
+LR D + VRL
Sbjct: 391 LLRGIDHLPVRL 402
Score = 51.5 bits (124), Expect = 6e-07
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E+V + +P+ + V++ +RD K FP P +D R+ G++ F G
Sbjct: 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDV---------TRDTRGHLSFGQG 347
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 589
C+G+ A LE +V L + RF + +D+ L+LR
Sbjct: 348 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR 393
Score = 50.7 bits (122), Expect = 1e-06
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR R +E+V + +P+ + V++ +RDP+ FP P +D R
Sbjct: 280 EILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 63.0 bits (154), Expect = 1e-10
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 674 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
I+EALR P V RK E V L D + V + + + +RD +VF E + P R
Sbjct: 244 IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR- 302
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTL 790
NP ++ F +G C+G A LE ++ + +RF + ++ + L
Sbjct: 303 --------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVPNEVL 354
Query: 791 LG 792
G
Sbjct: 355 NG 356
Score = 50.7 bits (122), Expect = 1e-06
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
I+EALR P V RK E V L D + V + + + +RD EVF E + PDR
Sbjct: 244 IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR 302
Score = 49.1 bits (118), Expect = 3e-06
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V L D + V + + + +RD +VF E + P R NP ++ F +G
Sbjct: 263 ERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR---------NPNPHLSFGSG 313
Query: 545 PRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLG 584
C+G A LE ++ + +RF + ++ + L G
Sbjct: 314 IHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNG 356
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 63.1 bits (154), Expect = 1e-10
Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 38/187 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TT AI +L L E +++ + + +P A ++E
Sbjct: 276 NETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTA--------------------VEEI 315
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R V ++ R L++D+ L + +V + + +RD F P +D
Sbjct: 316 VRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDL------- 368
Query: 738 AAGRNPYGYIPFS-AGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
RNP ++ F G C+G A E +V + R+ D+ E
Sbjct: 369 --ARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMP--------DVVATEEPAR 418
Query: 797 RPQDGIR 803
I
Sbjct: 419 LLSQFIH 425
Score = 46.9 bits (112), Expect = 2e-05
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++E +R V ++ R L++D+ L + +V + + +RD F P +D R
Sbjct: 312 VEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR 370
Score = 45.8 bits (109), Expect = 4e-05
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 18/112 (16%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFS-A 543
+D+ L + +V + + +RD F P +D RNP ++ F
Sbjct: 331 QDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDL---------ARNPNPHLGFGGG 381
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
G C+G A E +V + R+ D+ E I
Sbjct: 382 GAHFCLGANLARREIRVAFDELRRQMP--------DVVATEEPARLLSQFIH 425
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 62.7 bits (153), Expect = 2e-10
Identities = 30/180 (16%), Positives = 51/180 (28%), Gaps = 36/180 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT + + ++ L + E+ ++ + L +E
Sbjct: 257 LDTVVNFLSFFMIHLARHPELVAELRSD----------------PLK-----LMRGAEEM 295
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
R +P V AR +++D L R +++ D P P D
Sbjct: 296 FRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDF------- 347
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 792
R + F GP C G A +E V L L+R +
Sbjct: 348 --SRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSGIVAA 405
Score = 48.1 bits (115), Expect = 7e-06
Identities = 19/105 (18%), Positives = 27/105 (25%), Gaps = 14/105 (13%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
+D L R +++ D P P D R + F G
Sbjct: 310 KDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR---------RSISHSTFGGG 360
Query: 545 PRNCIGQKFAMLEEKVILANILRRFR-----VEAVDRREDLTLLG 584
P C G A +E V L L+R +
Sbjct: 361 PHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSGIVAA 405
Score = 46.2 bits (110), Expect = 3e-05
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
+E R +P V AR +++D L R +++ D P P D R
Sbjct: 292 AEEMFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR 349
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 62.2 bits (152), Expect = 2e-10
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 670 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYD 729
L ++E LR PSV R+L DV L L RD V+++ +RD + + RP+ +D
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 730 PGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDL 788
R+P + F AG R C+G A + + +A L R + + L
Sbjct: 326 I---------ERDPVPSMSFGAGMRYCLGSYLARTQLRAAVA-ALARLPGLRLGCASDAL 375
Query: 789 TLLGELILR 797
+ R
Sbjct: 376 AYQPRTMFR 384
Score = 53.8 bits (130), Expect = 1e-07
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
L ++E LR PSV R+L DV L L RD V+++ +RDP + RP+ +D
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 473 PDR 475
+R
Sbjct: 326 IER 328
Score = 48.7 bits (117), Expect = 4e-06
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
DV L L RD V+++ +RD + + RP+ +D R+P + F AG
Sbjct: 289 VDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDI---------ERDPVPSMSFGAG 339
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 589
R C+G A + + +A L R + + L + R
Sbjct: 340 MRYCLGSYLARTQLRAAVA-ALARLPGLRLGCASDALAYQPRTMFR 384
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 63.5 bits (154), Expect = 2e-10
Identities = 111/520 (21%), Positives = 160/520 (30%), Gaps = 173/520 (33%)
Query: 395 ASSLKPFTTIRSLNSMKYLEACIKEALRLYPSVP----FIARKLSEDVPLPDYVLPRDTE 450
A S +P T S S LE + VP FIA +L E + +LP TE
Sbjct: 3 AYSTRPLTL--SHGS---LEHVL--------LVPTASFFIASQLQEQF---NKILPEPTE 46
Query: 451 VIIVVYNLHRDPEVFPRPELYDPDRFLSENAKLSEDVPLPDY--VLP-----------RD 497
D E EL +FL + L E + + VL
Sbjct: 47 ------GFAADDEPTTPAELVG--KFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEG 98
Query: 498 TEVIIVVYNL--HRDAKVFPRPEL---YDPGRFLSENAAGRNPYGYIPFSA-------GP 545
++ + L D + EL Y + A R P+ SA G
Sbjct: 99 NDIHALAAKLLQENDTTLVKTKELIKNY----ITARIMAKR-PFDKKSNSALFRAVGEGN 153
Query: 546 RNCI----GQ----KFAMLEEKVILANILRRFRVEAVDRREDL-----TLLGELILRPQD 592
+ GQ + EE L ++ + + V DL L ELI D
Sbjct: 154 AQLVAIFGGQGNTDDY--FEE---LRDLYQTYHVLV----GDLIKFSAETLSELIRTTLD 204
Query: 593 -------GIRVM---FGVDTSRDV-----APVSPIWAPLRHDTTSAAICWTLLLLGSN-Q 636
G+ ++ + D P+S PL A T LLG
Sbjct: 205 AEKVFTQGLNILEWLENPSNTPDKDYLLSIPIS---CPLIGVIQLAHYVVTAKLLGFTPG 261
Query: 637 EIQNK------VYEEIVATSP--KASSLKPFTTRSLNSMKYLEACIKEALRLYP--SVPF 686
E+++ + +V + S + F ++ L YP S+P
Sbjct: 262 ELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPP 321
Query: 687 IARKLS----EDVPLP-------------DYV------LPRDTEVIIVVYNLHRDAKV-- 721
+ S E VP P DYV LP +V I + N ++ V
Sbjct: 322 SILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSG 381
Query: 722 FPRPELYDPGRFLSENAAGRNPYGY----IPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
P+ LY L + A P G IPFS E K+ +N RF
Sbjct: 382 PPQ-SLYGLNLTLRKAKA---PSGLDQSRIPFS--------------ERKLKFSN---RF 420
Query: 778 -RV----------EAVDR-REDLTLLGELILRPQD-GIRV 804
V A D +DL + + +D I V
Sbjct: 421 LPVASPFHSHLLVPASDLINKDL-VKNNVSFNAKDIQIPV 459
Score = 58.9 bits (142), Expect = 6e-09
Identities = 91/550 (16%), Positives = 165/550 (30%), Gaps = 177/550 (32%)
Query: 138 GHIWHQRRKILTPAFH---FRILEDFVEVFQEQSEV--LVRRL---GEVGVGESVNVF-P 188
G++ F L +F + E +++ L +L + + ++ +
Sbjct: 66 GYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 189 YVTLCTL-----DIVCETAMGRKINA-----------QGDSNSEYVKAVYELSSLYKKHQ 232
Y+T + D +A+ R + QG+++ +Y + EL LY+ +
Sbjct: 126 YITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTD-DYFE---ELRDLYQTYH 181
Query: 233 RCLNTLHSFSYKVINERKAELKARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTD 292
+ L I L E I + K L++L L +
Sbjct: 182 VLVGDL-------IKFSAETLS-------ELIRTTLDAEKVFTQGLNIL------EWLEN 221
Query: 293 ENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRS 352
+ + D S I L+ + IQ Y + K P RS
Sbjct: 222 PSNTPDKDYL-------LSIPISCPLIGV-----IQLAHY----VVTAKLLGFTPGELRS 265
Query: 353 LNSMKYLEACIKEALRLYPSVPFIARKLGNKVYEEIVATS-SKASSLKPFTTIRSLNSMK 411
+K + L + A + ++ S + F + K
Sbjct: 266 --YLKGATGHSQ-GL--------------------VTAVAIAETDSWESFFV----SVRK 298
Query: 412 YLEACIK---EALRLYP--SVPFIARKLS----EDVPLPDYVLPRDTEVIIVVYNLHRDP 462
+ YP S+P + S E VP P ++ + NL
Sbjct: 299 AITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSP----------MLSISNL---- 344
Query: 463 EVFPRPELYDPDRFLSE-NAKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKV--FPRPEL 519
+ ++ ++++ N+ LP +V I + N ++ V P+ L
Sbjct: 345 ---TQEQV---QDYVNKTNSH-----------LPAGKQVEISLVNGAKNLVVSGPPQ-SL 386
Query: 520 YDPGRFLSENAAGRNPYGY----IPFSAGPRNCIGQKFAMLEEKVILANILRRF-RV--- 571
Y L + A P G IPFS E K+ +N RF V
Sbjct: 387 YGLNLTLRKAKA---PSGLDQSRIPFS--------------ERKLKFSN---RFLPVASP 426
Query: 572 -------EAVDR-REDLTLLGELILRPQD-GIRVMFGVDTSRDVAPVSP-IWAPLRHDTT 621
A D +DL + + +D I V + D+ +S I +
Sbjct: 427 FHSHLLVPASDLINKDL-VKNNVSFNAKDIQIPV-YDTFDGSDLRVLSGSISERIVDCII 484
Query: 622 SAAICWTLLL 631
+ W
Sbjct: 485 RLPVKWETTT 494
Score = 58.9 bits (142), Expect = 7e-09
Identities = 88/535 (16%), Positives = 147/535 (27%), Gaps = 201/535 (37%)
Query: 274 RPAFLDLLIEASERHNLTDE--NIREEVDTFM-F-----EGHDTTSAAICWTLLL----- 320
+ F +L E +E DE E V F+ + E L L
Sbjct: 34 QEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFEN 93
Query: 321 --LGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 378
L N +I + A + + KE ++ Y AR
Sbjct: 94 CYLEGN-DIHA-----LAAKLLQENDTTL-------------VKTKELIKNY----ITAR 130
Query: 379 KLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYL--------EACIKEALR-LY----P 425
+ + + S+L F + N+ + +E LR LY
Sbjct: 131 IMAKRPF-----DKKSNSAL--FRAVGEGNAQLVAIFGGQGNTDDYFEE-LRDLYQTYHV 182
Query: 426 SV-PFI---ARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENA 481
V I A LSE L R T +VF + + +L
Sbjct: 183 LVGDLIKFSAETLSE--------LIRTT---------LDAEKVFTQG--LNILEWLEN-- 221
Query: 482 KLSEDVPLPDYV------LPRDTEVIIVVYNL-HRDAKVFPRPELYDPGRFLSENAAGRN 534
+ P DY+ P +I V L H Y ++ G
Sbjct: 222 --PSNTPDKDYLLSIPISCP-----LIGVIQLAH-----------Y----VVTAKLLGFT 259
Query: 535 PYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGI 594
P + G + ++ A + D E + +
Sbjct: 260 PGELRSYLKGATGHS--------QGLVTAVA-----IAETDSWESFFVSVRKAI------ 300
Query: 595 RVMF--GVDTSRDVAPVSPIWAPLRHDTTSAAI---CWTLLLLGSNQE-IQNKVYE---- 644
V+F GV + P + + + D+ L + QE +Q+ V +
Sbjct: 301 TVLFFIGVR-CYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSH 359
Query: 645 -------EI---------VATSPKASSLK--------------------PFTTRSLN-SM 667
EI V + P SL PF+ R L S
Sbjct: 360 LPAGKQVEISLVNGAKNLVVSGP-PQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSN 418
Query: 668 KYLEACIKEALRLYP-SVPF-------IARKLSEDVPLPDYVLPRDTEVIIVVYN 714
++L P + PF + +++D+ + V ++ I VY+
Sbjct: 419 RFL-----------PVASPFHSHLLVPASDLINKDLV-KNNVSFNAKDIQIPVYD 461
Score = 35.4 bits (81), Expect = 0.086
Identities = 29/233 (12%), Positives = 64/233 (27%), Gaps = 89/233 (38%)
Query: 2 SKLVSTLFIV---AQSVIREFRTIALLLTL------------SY-FVVRRIKQSRLVKLI 45
K ++ LF + + +L ++ S + + Q ++ +
Sbjct: 297 RKAITVLFFIGVRCY---EAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYV 353
Query: 46 NRIPGPTSLPV-------LGNSIECNV-----------------------DNQEVFNRII 75
N+ + LP L N + V +Q +RI
Sbjct: 354 NKT--NSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQ---SRIP 408
Query: 76 SSKRLFGHKKGLNR---IWLGGTPYVFIHTAENAEPILNNSRTIHKSSDYRYIEPWLGNG 132
S+R K NR + +P+ H+ +L + + + +
Sbjct: 409 FSER---KLKFSNRFLPV---ASPF---HS-----HLLVPASDLINKDLVKNNVSFNAKD 454
Query: 133 LLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVN 185
+ +I P + D + S + R+ + + V
Sbjct: 455 I------------QI--PVYDTFDGSD----LRVLSGSISERIVDCIIRLPVK 489
Score = 32.7 bits (74), Expect = 0.58
Identities = 53/312 (16%), Positives = 91/312 (29%), Gaps = 119/312 (38%)
Query: 51 PTSLPVLG------NSIECNV---DNQEVFNRIISSKRLFGHKKGLNRIWLGGTPYVFIH 101
P S P++G + + E+ + + GH +GL + V I
Sbjct: 235 PISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKG---ATGHSQGL----VTA---VAIA 284
Query: 102 TAENAEPILNNSRTIHKSSDYRYIEP--WLGNGLLTSAGHIWHQRRKILTPAFHFRILED 159
++ E + R + I ++G + + L P+ ILED
Sbjct: 285 ETDSWESFFVSVR--------KAITVLFFIG-----VRCYEAYPNTS-LPPS----ILED 326
Query: 160 FVE--------------VFQEQSEVLVRRL-GEVGVGESVNVFPYVTLCTLDIVCETAMG 204
+E + QEQ + V + + G+ V ++L
Sbjct: 327 SLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQV----EISL------------ 370
Query: 205 RKINAQGDSNSEYV-----KAVYELSSLYKKHQRCLNTLHS---FSYKVINERKAELKAR 256
+N G N V +++Y L+ +K + S FS ERK + R
Sbjct: 371 --VN--GAKN--LVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFS-----ERKLKFSNR 419
Query: 257 -------------KNTEDETIED-PTEHVKKRPAFLDLLI--------------EASERH 288
D +D +V D+ I S
Sbjct: 420 FLPVASPFHSHLLVPASDLINKDLVKNNVSFNAK--DIQIPVYDTFDGSDLRVLSGSISE 477
Query: 289 NLTDENIREEVD 300
+ D IR V
Sbjct: 478 RIVDCIIRLPVK 489
Score = 30.8 bits (69), Expect = 2.6
Identities = 57/314 (18%), Positives = 92/314 (29%), Gaps = 119/314 (37%)
Query: 136 SAGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESVNVFPYVTLCTL 195
+A +W++ + F IL+ V + + GE G N Y
Sbjct: 1641 AAQDVWNRADNHFKDTYGFSILD---IVINNPVNLTIHFGGEKGKRIREN---Y------ 1688
Query: 196 DIVCETAMGRKINAQGDSNSEYV-KAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELK 254
+AM + G +E + K + E S+ Y +F K L
Sbjct: 1689 -----SAMIFETIVDGKLKTEKIFKEINEHSTSY-----------TF-----RSEKGLLS 1727
Query: 255 ARKNTEDETIEDPTEHVKKRPAFLDLLIEASERHNLTDENIREEVDTFMFEGHDTTSAAI 314
A + T+ PA L L+E + +L + + TF GH S
Sbjct: 1728 ATQFTQ--------------PA-L-TLMEKAAFEDLKSKGLIPADATFA--GH---S--- 1763
Query: 315 CWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPF----------------------TTRS 352
LG E A + A + RS
Sbjct: 1764 ------LG-----------EYAALASLADVM-SIESLVEVVFYRGMTMQVAVPRDELGRS 1805
Query: 353 LNSM------KYLEACIKEALRLYPSVPFIARKLGNKVYEEIV---------ATSSKASS 397
M + + +EAL+ V + ++ G V EIV + +
Sbjct: 1806 NYGMIAINPGRVAASFSQEALQYV--VERVGKRTGWLV--EIVNYNVENQQYVAAGDLRA 1861
Query: 398 LKPFTTIRSLNSMK 411
L T + LN +K
Sbjct: 1862 LDTVTNV--LNFIK 1873
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 62.3 bits (152), Expect = 2e-10
Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 31/178 (17%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
DT + +++ L + E + ++ E + A +E
Sbjct: 251 LDTVVNFLSFSMEFLAKSPEHRQELIER----------------PER-----IPAACEEL 289
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
LR + V R L+ D L + ++++ D + P D
Sbjct: 290 LRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDF------- 341
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 795
R + F G C+GQ A E V L L R ++ + ++
Sbjct: 342 --SRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIV 397
Score = 48.5 bits (116), Expect = 6e-06
Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D L + ++++ D + P D R + F G
Sbjct: 304 SDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHG 354
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELI 587
C+GQ A E V L L R ++ + ++
Sbjct: 355 SHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIV 397
Score = 45.0 bits (107), Expect = 6e-05
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
+E LR + V R L+ D L + ++++ D P D R
Sbjct: 286 CEELLRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR 343
Score = 28.4 bits (64), Expect = 9.4
Identities = 6/50 (12%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 278 LDLLIEASER-HNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQE 326
+ ++ +T + + + G DT + +++ L + E
Sbjct: 221 ISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE 270
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 62.2 bits (152), Expect = 3e-10
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 16/124 (12%)
Query: 676 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLS 735
E LR I R ED+ + + V++ + ++RDAK + P+++D
Sbjct: 282 ELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDA----- 336
Query: 736 ENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDL 788
RN ++ F G C+GQ A E ++ L + R ++ V +
Sbjct: 337 ----RRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGH 392
Query: 789 TLLG 792
G
Sbjct: 393 DAQG 396
Score = 52.6 bits (127), Expect = 3e-07
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ + + V++ + ++RDAK + P+++D RN ++ F G
Sbjct: 299 EDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDA---------RRNARHHVGFGHG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
C+GQ A E ++ L + R ++ V + G
Sbjct: 350 IHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQG 396
Score = 48.8 bits (117), Expect = 5e-06
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 419 EALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR I R ED+ + + V++ + ++RD + + P+++D R
Sbjct: 282 ELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR 338
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 61.1 bits (149), Expect = 7e-10
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR V R +EDV +P V++ + +RDA P P+ D
Sbjct: 275 EFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDI---- 330
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGE 793
R+ G + F G C+G + A LE +V + + + ++L
Sbjct: 331 -----TRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRES 385
Query: 794 LILRPQDGIRVRLFPR 809
++R + V + PR
Sbjct: 386 TLVRGLSRMPVTMGPR 401
Score = 51.9 bits (125), Expect = 4e-07
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV +P V++ + +RDA P P+ D R+ G + F G
Sbjct: 293 EDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDI---------TRDASGGVFFGHG 343
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
C+G + A LE +V + + ++ + RE + G
Sbjct: 344 IHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRG 390
Score = 46.5 bits (111), Expect = 2e-05
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR V R +EDV +P V++ + +RD + P P+ D R
Sbjct: 275 EFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR 332
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 60.7 bits (148), Expect = 8e-10
Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 37/176 (21%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
+DTT ++ +L L N + K+ +L +E + E
Sbjct: 267 NDTTRNSMTGGVLALHKNPDQFAKLKAN----------------PAL-----VETMVPEI 305
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R + + R D L + + +V++ Y+ +RD +V RPE + R
Sbjct: 306 IRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR----- 360
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 793
P ++ F G C+G + A ++ +++ IL RF + ++ E
Sbjct: 361 ---PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFS--------RIEVMAE 405
Score = 45.0 bits (107), Expect = 7e-05
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D L + + +V++ Y+ +RD +V RPE + R P ++ F G
Sbjct: 321 ADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHLSFGFG 372
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 585
C+G + A ++ +++ IL RF + ++ E
Sbjct: 373 IHRCVGNRLAEMQLRILWEEILTRFS--------RIEVMAE 405
Score = 41.9 bits (99), Expect = 7e-04
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 413 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 472
+E + E +R + + R D L + + +V++ Y+ +RD EV RPE +
Sbjct: 298 VETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFI 357
Query: 473 PDR 475
DR
Sbjct: 358 IDR 360
Score = 31.9 bits (73), Expect = 0.80
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 280 LLIEASERHNLTDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQE 326
+L + N+T E V + G+DTT ++ +L L N +
Sbjct: 240 MLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPD 286
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 60.4 bits (147), Expect = 1e-09
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR V R E V L V+P V++V+ + HR + FP P +D
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDI---- 357
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLL 791
R+ G++ F G CIG A LE ++ + +L R + V +L
Sbjct: 358 -----RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLAL-DVS-PGELVWY 410
Query: 792 GELILRPQDGIRVRLFPR 809
++R + +R
Sbjct: 411 PNPMIRGLKALPIRWRRG 428
Score = 52.7 bits (127), Expect = 3e-07
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
E V L V+P V++V+ + HR + FP P +D R+ G++ F G
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDI---------RRDTAGHLAFGHG 370
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
CIG A LE ++ + +L R + + + G
Sbjct: 371 IHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRG 417
Score = 46.1 bits (110), Expect = 3e-05
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR V R E V L V+P V++V+ + HR PE FP P +D R
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 59.2 bits (144), Expect = 2e-09
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E R + + I R EDV + D ++ + +I + +RD +VF P+ ++ R
Sbjct: 279 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR-- 336
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRED 787
P + F G CI + A E + + + ++F + ++
Sbjct: 337 -----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPL 391
Query: 788 LTLLG 792
+G
Sbjct: 392 NRDVG 396
Score = 53.8 bits (130), Expect = 1e-07
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + D ++ + +I + +RD +VF P+ ++ R P + F G
Sbjct: 297 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
CI + A E + + + ++F + ++ +G
Sbjct: 350 DHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVG 396
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 59.2 bits (144), Expect = 2e-09
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR+ S + R + D+ + D ++ + V++++ + D + FP P + R
Sbjct: 272 ELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR-- 329
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLL 791
NP ++ F G C G ++ + +L++ + AV + L
Sbjct: 330 ------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL-AVP-IDQLVWR 381
Query: 792 GELILR 797
R
Sbjct: 382 TRFQRR 387
Score = 53.0 bits (128), Expect = 2e-07
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 13/108 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D+ + D ++ + V++++ + D + FP P + R NP ++ F G
Sbjct: 290 ADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAFGRG 341
Query: 545 PRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLGELILR 589
C G ++ + +L++ + AV + L R
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKMPGVDL-AVP-IDQLVWRTRFQRR 387
Score = 44.9 bits (107), Expect = 7e-05
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR+ S + R + D+ + D ++ + V++++ + DPE FP P + DR
Sbjct: 272 ELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR 329
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 58.8 bits (143), Expect = 3e-09
Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVL-PRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E LR P+V R D+ LPD R ++ +R + +D R
Sbjct: 281 ETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR- 339
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLG 792
++ F G C+G A +E + L ++ RF + D E+L +
Sbjct: 340 --------TVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVP 391
Query: 793 ELILRPQDGIRVRLFP 808
LI + V L
Sbjct: 392 SLISNGHQRLPVLLHA 407
Score = 51.9 bits (125), Expect = 5e-07
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 485 EDVPLPDYVL-PRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA 543
D+ LPD R ++ +R + +D R ++ F
Sbjct: 299 TDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR---------TVKEHLAFGH 349
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 589
G C+G A +E + L ++ RF + D E+L + LI
Sbjct: 350 GVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISN 396
Score = 44.2 bits (105), Expect = 1e-04
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVL-PRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR P+V R D+ LPD R ++ +R P+ + +D R
Sbjct: 281 ETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR 339
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 58.9 bits (143), Expect = 3e-09
Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 38/181 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
HDTTS++ ++ L N E + +L + + EA
Sbjct: 269 HDTTSSSSGGAIIGLSRNPEQLALAKSD----------------PAL-----IPRLVDEA 307
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R V R D + + R +++ + +RD +VF P+ +D R
Sbjct: 308 VRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR----- 362
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
P ++ F G C+GQ A LE K+ +L + + + L G L
Sbjct: 363 ----FPNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK--------SVELSGPPRLV 410
Query: 798 P 798
Sbjct: 411 A 411
Score = 44.2 bits (105), Expect = 1e-04
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D + + R +++ + +RD +VF P+ +D R P ++ F G
Sbjct: 323 ADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR---------FPNRHLGFGWG 373
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRP 590
C+GQ A LE K+ +L + + + L G L
Sbjct: 374 AHMCLGQHLAKLEMKIFFEELLPKLK--------SVELSGPPRLVA 411
Score = 41.1 bits (97), Expect = 0.001
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
+ EA+R V R D + + R +++ + +RD EVF P+ +D R
Sbjct: 304 VDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR 362
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 58.8 bits (143), Expect = 3e-09
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 676 EALRLYPSVP--FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E LR +AR EDV + + V + +RD VFP P+ D
Sbjct: 283 ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDL--- 339
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRE 786
R+P ++ + G C G A ++ ++++ +L R E V R
Sbjct: 340 ------DRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRR 393
Query: 787 DLTLLG 792
+ G
Sbjct: 394 KTMIRG 399
Score = 53.0 bits (128), Expect = 2e-07
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + + V + +RD VFP P+ D R+P ++ + G
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDL---------DRDPNPHLAYGNG 352
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
C G A ++ ++++ +L R E V R + G
Sbjct: 353 HHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRG 399
Score = 44.6 bits (106), Expect = 8e-05
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 419 EALRLYPSVP--FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR +AR EDV + + V + +RDP+VFP P+ D DR
Sbjct: 283 ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR 341
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 58.4 bits (142), Expect = 4e-09
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 17/125 (13%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR R + D+ + ++ VI+V +RD V+ P+ D
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDI---- 338
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRED 787
R+ ++ F G C+GQ A LE +VIL ++ R VE + R
Sbjct: 339 -----HRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPG 393
Query: 788 LTLLG 792
T+ G
Sbjct: 394 TTIQG 398
Score = 51.9 bits (125), Expect = 5e-07
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D+ + ++ VI+V +RD V+ P+ D R+ ++ F G
Sbjct: 301 ADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDI---------HRSARHHLAFGFG 351
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
C+GQ A LE +VIL ++ R VE + R T+ G
Sbjct: 352 VHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQG 398
Score = 45.3 bits (108), Expect = 5e-05
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR R + D+ + ++ VI+V +RD V+ P+ D R
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR 340
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 58.4 bits (142), Expect = 4e-09
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 676 EALRLYPSVPF--IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E LR P ++R EDV + + V + +RD +VFP P+ D
Sbjct: 280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF--- 336
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRE 786
R+P ++ F GP C G A LE ++++ +L R E V ++
Sbjct: 337 ------ERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 787 DLTLLG 792
+ G
Sbjct: 391 GALIRG 396
Score = 52.3 bits (126), Expect = 4e-07
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + + V + +RD +VFP P+ D R+P ++ F G
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF---------ERSPNPHVSFGFG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
P C G A LE ++++ +L R E V ++ + G
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRG 396
Score = 44.9 bits (107), Expect = 7e-05
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 419 EALRLYPSVPF--IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR P ++R EDV + + V + +RDPEVFP P+ D +R
Sbjct: 280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER 338
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 57.6 bits (140), Expect = 7e-09
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR + +R +EDV + + VI+ + + + D VF P + D
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDV---- 339
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLL 791
R ++ F GP C+GQ A +E +++ + RR R+ AV ED+
Sbjct: 340 -----ERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRL-AVP-MEDVPFK 392
Query: 792 GELILR 797
G+ ++
Sbjct: 393 GDSVIY 398
Score = 51.9 bits (125), Expect = 5e-07
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
EDV + + VI+ + + + D VF P + D R ++ F G
Sbjct: 302 EDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDV---------ERGARHHLAFGFG 352
Query: 545 PRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLGELILR 589
P C+GQ A +E +++ + RR R+ AV ED+ G+ ++
Sbjct: 353 PHQCLGQNLARMELQIVFDTLFRRIPSLRL-AVP-MEDVPFKGDSVIY 398
Score = 44.5 bits (106), Expect = 9e-05
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR + +R +EDV + + VI+ + + + DP VF P + D +R
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 57.6 bits (140), Expect = 8e-09
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR F R + DV L + + +V+ V D PE +D
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDI---- 331
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRED 787
R P ++ F G CIGQ+ A +E +++ + RR VE + R D
Sbjct: 332 -----TRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHD 386
Query: 788 LTLLG 792
+ G
Sbjct: 387 MVFYG 391
Score = 51.1 bits (123), Expect = 8e-07
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
DV L + + +V+ V D PE +D R P ++ F G
Sbjct: 294 RDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDI---------TRRPAPHLAFGFG 344
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
CIGQ+ A +E +++ + RR VE + R D+ G
Sbjct: 345 AHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYG 391
Score = 44.5 bits (106), Expect = 1e-04
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR F R + DV L + + +V+ V DP PE +D R
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR 333
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 57.7 bits (140), Expect = 8e-09
Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 38/186 (20%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
HDTTSA+ L L + ++ +V + R+L L ++EA
Sbjct: 291 HDTTSASSAGAALALARDPDLFARVKAD----------------RNL-----LPGIVEEA 329
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R V R + D L + +++ + D FP P +DP R
Sbjct: 330 IRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR----- 384
Query: 738 AAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILR 797
++ F AG C+G A LE +V+L +L R L L GE
Sbjct: 385 ----PANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD--------SLELAGEPKRV 432
Query: 798 PQDGIR 803
+
Sbjct: 433 NSTFVG 438
Score = 45.8 bits (109), Expect = 5e-05
Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 17/111 (15%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
D L + +++ + D FP P +DP R ++ F AG
Sbjct: 345 TDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR---------PANRHLAFGAG 395
Query: 545 PRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 595
C+G A LE +V+L +L R L L GE +
Sbjct: 396 SHQCLGLHLARLEMRVLLDVLLDRVD--------SLELAGEPKRVNSTFVG 438
Score = 42.3 bits (100), Expect = 5e-04
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
++EA+R V R + D L + +++ + DP FP P +DP R
Sbjct: 326 VEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR 384
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 57.3 bits (139), Expect = 9e-09
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E +R R ED+ L + + VI + +RD + P + D
Sbjct: 275 ELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDV---- 330
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRED 787
R P ++ F G +C+G A LE + + + RRF + + R
Sbjct: 331 -----TREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLT 385
Query: 788 LTLLG 792
G
Sbjct: 386 TPAYG 390
Score = 51.9 bits (125), Expect = 4e-07
Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 455 VYNLHRDPEVFPR----PELYDPD-----RFLSENAKLS-----EDVPLPDYVLPRDTEV 500
V + R PE + R+L+ + ED+ L + + V
Sbjct: 249 VLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSV 308
Query: 501 IIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKV 560
I + +RD + P + D R P ++ F G +C+G A LE +
Sbjct: 309 ICSLPAANRDPALAPDVDRLDV---------TREPIPHVAFGHGVHHCLGAALARLELRT 359
Query: 561 ILANILRRF-------RVEAVDRREDLTLLG 584
+ + RRF + + R G
Sbjct: 360 VFTELWRRFPALRLADPAQDTEFRLTTPAYG 390
Score = 44.2 bits (105), Expect = 1e-04
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E +R R ED+ L + + VI + +RDP + P + D R
Sbjct: 275 ELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR 332
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 57.3 bits (139), Expect = 9e-09
Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 676 EALRLYPSV--PFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E LR + R SED+ + V+ + + D + F PE +D
Sbjct: 280 EVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDA--- 336
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRE 786
R P ++ F G +CIG A LE + + + R VE + +E
Sbjct: 337 ------ARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKE 390
Query: 787 DLTLLG 792
G
Sbjct: 391 GQLSGG 396
Score = 52.6 bits (127), Expect = 3e-07
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ + V+ + + D + F PE +D R P ++ F G
Sbjct: 299 EDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDA---------ARTPNPHLTFGHG 349
Query: 545 PRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRREDLTLLG 584
+CIG A LE + + + R VE + +E G
Sbjct: 350 IWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGG 396
Score = 44.2 bits (105), Expect = 1e-04
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 419 EALRLYPSV--PFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR + R SED+ + V+ + + D F PE +D R
Sbjct: 280 EVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAAR 338
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 57.3 bits (139), Expect = 1e-08
Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 676 EALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRF 733
E R P A R EDV L + V+ +RD FP + D
Sbjct: 293 ELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDV--- 349
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-------RVEAVDRRE 786
R P ++ F G +C+G A +E +V L +L+R + E
Sbjct: 350 ------DRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSE 403
Query: 787 DLTLLG 792
+ L G
Sbjct: 404 GMLLRG 409
Score = 53.0 bits (128), Expect = 2e-07
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 31/152 (20%)
Query: 455 VYNLHRDPEVFPR----PELYDPD-----RFLSENAKLS------EDVPLPDYVLPRDTE 499
VY L PE+ + PEL R++ + EDV L +
Sbjct: 267 VYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEP 326
Query: 500 VIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEK 559
V+ +RD FP + D R P ++ F G +C+G A +E +
Sbjct: 327 VLASTGAANRDQAQFPDADRIDV---------DRTPNQHLGFGHGVHHCLGAPLARVELQ 377
Query: 560 VILANILRRF-------RVEAVDRREDLTLLG 584
V L +L+R + E + L G
Sbjct: 378 VALEVLLQRLPGIRLGIPETQLRWSEGMLLRG 409
Score = 43.8 bits (104), Expect = 2e-04
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 419 EALRLYPSVPFIA--RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E R P A R EDV L + V+ +RD FP + D DR
Sbjct: 293 ELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR 351
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 57.3 bits (139), Expect = 1e-08
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR+ R +ED+ L +P D VI ++ + D + F PE D
Sbjct: 288 ELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDF---- 343
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLL 791
R ++ F G C+GQ A LE +V L +LRR R+ A + R+ + +
Sbjct: 344 -----HRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRL-AGE-RDQVVVK 396
Query: 792 GELILR 797
+
Sbjct: 397 HDSATF 402
Score = 51.5 bits (124), Expect = 6e-07
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
ED+ L +P D VI ++ + D + F PE D R ++ F G
Sbjct: 306 EDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDF---------HRTDNHHVAFGYG 356
Query: 545 PRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLGELILR 589
C+GQ A LE +V L +LRR R+ A + R+ + + +
Sbjct: 357 VHQCVGQHLARLELEVALETLLRRVPTLRL-AGE-RDQVVVKHDSATF 402
Score = 44.5 bits (106), Expect = 1e-04
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR+ R +ED+ L +P D VI ++ + DPE F PE D R
Sbjct: 288 ELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR 345
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 56.5 bits (137), Expect = 2e-08
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVF-PRPELYDPGRF 733
E LR + R +EDVP+ D V+P +I+ L RD + P + +D R
Sbjct: 281 ETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTR- 339
Query: 734 LSENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLG 792
+ R+ I F GP C G + +E V L + RF ++ +L
Sbjct: 340 ---TSGNRH----ISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKP 392
Query: 793 ELILRPQDGIRVRLFP 808
+ + VRL
Sbjct: 393 VVTQNDLFELPVRLAH 408
Score = 48.4 bits (116), Expect = 6e-06
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVF-PRPELYDPGRFLSENAAGRNPYGYIPFSA 543
EDVP+ D V+P +I+ L RD + P + +D R + R+ I F
Sbjct: 299 EDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTR----TSGNRH----ISFGH 350
Query: 544 GPRNCIGQKFAMLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 589
GP C G + +E V L + RF ++ +L +
Sbjct: 351 GPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQN 397
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 56.5 bits (137), Expect = 2e-08
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E +R V R +DV + ++ V+ + +RD + P P++ D
Sbjct: 284 ELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDA---- 339
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
R + F G C+G A ++ + RRF
Sbjct: 340 -----NRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
Score = 50.3 bits (121), Expect = 1e-06
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
+DV + ++ V+ + +RD + P P++ D R + F G
Sbjct: 302 KDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDA---------NRAAVSDVGFGHG 352
Query: 545 PRNCIGQKFAMLEEKVILANILRRF 569
C+G A ++ + RRF
Sbjct: 353 IHYCVGAALARSMLRMAYQTLWRRF 377
Score = 44.2 bits (105), Expect = 1e-04
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E +R V R +DV + ++ V+ + +RD + P P++ D +R
Sbjct: 284 ELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 341
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 55.8 bits (135), Expect = 3e-08
Identities = 29/199 (14%), Positives = 54/199 (27%), Gaps = 47/199 (23%)
Query: 618 HDTTSAAICWTLLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEA 677
++TT +I ++ + + + T E
Sbjct: 270 NETTRNSITQGMMAFAEHPDQWELYKKVRPET-----------------------AADEI 306
Query: 678 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSEN 737
+R V R D L + + V++ + + D +VF P ++
Sbjct: 307 VRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNI------- 359
Query: 738 AAGRNPYGYIPFSA-GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELIL 796
RNP ++ F G CIG A + +I + DL +
Sbjct: 360 --LRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM--------PDLKPISAPER 409
Query: 797 RPQDGIR------VRLFPR 809
+ V R
Sbjct: 410 LRSGWLNGIKHWQVDYTGR 428
Score = 41.9 bits (99), Expect = 6e-04
Identities = 13/59 (22%), Positives = 22/59 (37%)
Query: 417 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E +R V R D L + + V++ + + D EVF P ++ R
Sbjct: 303 ADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR 361
Score = 40.8 bits (96), Expect = 0.002
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 18/102 (17%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSA- 543
D L + + V++ + + D +VF P ++ RNP ++ F
Sbjct: 322 RDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNI---------LRNPNPHVGFGGT 372
Query: 544 GPRNCIGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGE 585
G CIG A + +I + DL +
Sbjct: 373 GAHYCIGANLARMTINLIFNAVADHM--------PDLKPISA 406
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 43.4 bits (103), Expect = 2e-04
Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 15/103 (14%)
Query: 676 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFL 734
E LR V R DV + + + + +R RF
Sbjct: 265 EVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRA----------PGDRF- 313
Query: 735 SENAAGRNPYGYIPFSAGPRNCIGQKFAMLEEKVILANILRRF 777
R ++ F G +CIG A L+ +V L ++ RF
Sbjct: 314 ---DITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
Score = 39.1 bits (92), Expect = 0.005
Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 27/121 (22%)
Query: 485 EDVPLPDYVLPRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAG 544
DV + + + + +R RF R ++ F G
Sbjct: 283 ADVRMAGRDIHAGDVLTCSMLATNRA----------PGDRF----DITREKATHMAFGHG 328
Query: 545 PRNCIGQKFAMLEEKVILANILRRF---RVEAVDRREDLTLLGELILRPQDGIRVMFGVD 601
+CIG A L+ +V L ++ RF R+ AV + LR + G F V+
Sbjct: 329 IHHCIGAPLARLQLRVALPAVVGRFPSLRL-AVPEED---------LRFKPGRPAPFAVE 378
Query: 602 T 602
Sbjct: 379 E 379
Score = 29.9 bits (68), Expect = 3.5
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 6/58 (10%)
Query: 419 EALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 475
E LR V R DV + + + + +R P + +D R
Sbjct: 265 EVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP-----GDRFDITR 317
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 38.0 bits (87), Expect = 0.003
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Query: 408 NSMKYLEACIKEALRLY-P-SVPFIARKLS 435
++K L+A +L+LY S P +A K +
Sbjct: 20 QALKKLQA----SLKLYADDSAPALAIKAT 45
Score = 38.0 bits (87), Expect = 0.003
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Query: 665 NSMKYLEACIKEALRLY-P-SVPFIARKLS 692
++K L+A +L+LY S P +A K +
Sbjct: 20 QALKKLQA----SLKLYADDSAPALAIKAT 45
Score = 38.0 bits (87), Expect = 0.004
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 16/40 (40%)
Query: 354 NSMKYLEACIKEALRLY-P-SVPFIARKLGNKVYEEIVAT 391
++K L+A +L+LY S P +A I AT
Sbjct: 20 QALKKLQA----SLKLYADDSAPALA----------IKAT 45
Score = 33.4 bits (75), Expect = 0.12
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 37 KQSRLVKLINRIP--GPTSLPVLG-N-SIE 62
KQ+ L KL + S P L ++E
Sbjct: 19 KQA-LKKLQASLKLYADDSAPALAIKATME 47
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA,
cysteine-sulfenic lyase; HET: ACO PG4; 1.95A
{Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A
1d8c_A* 2jqx_A
Length = 731
Score = 32.8 bits (75), Expect = 0.54
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 16/68 (23%)
Query: 237 TLHSFSYKVIN--ERKAELKARKNTEDETIEDPTEHVKKRPAFLD--LLIEASERHNLTD 292
TLH+ Y N +A + + + LD L I +E N +
Sbjct: 542 TLHALHYHQTNVQSVQANIAQTEFN------------AEFEPLLDDLLTIPVAENANWSA 589
Query: 293 ENIREEVD 300
+ I++E+D
Sbjct: 590 QEIQQELD 597
>1g73_A SMAC/diablo, second mitochondria-derived activator of caspases;
helix bundle, zinc-binding domain, apoptosis/apoptosis
inhibitor complex; 2.00A {Homo sapiens} SCOP: a.7.4.1
Length = 162
Score = 31.7 bits (71), Expect = 0.55
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 212 DSNSEYVKAVYELSSLYKKHQRCLNTLHSFS----YKVINERKAELKARKN 258
++ +EY KAVY L+SLY+++ L ++S ++VI +AE+ ++
Sbjct: 43 EAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSKHQ 93
>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like,
protein structure initiative, PSI; 1.38A {Galdieria
sulphuraria} PDB: 2q52_A
Length = 224
Score = 30.8 bits (69), Expect = 1.3
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 205 RKINAQGDSNSEYVKAVYELSSLYKKHQRCLNTLHSFSYKVINERKAELKARKNTEDETI 264
R++ S + V Y +L H + + K+ R+ + +
Sbjct: 112 RRLVVTDKSLEQCVTEAYN-CTLRPCHSAVIQKVFWGGVKLAPSRERFYRKLHPDLNIAK 170
Query: 265 EDPTEHVKKRPAFLDLLIEASERHNLTDENIREEV 299
E + + L +++ + L D+ +EV
Sbjct: 171 AKIEEFLIELHDPLCCIVQFFFQRELEDQCWGDEV 205
>1n8i_A Probable malate synthase G; glyoxylate pathway, acetyl coenzyme A,
isocitrate lyase, persistence, GLCB, structural
genomics, PSI; 2.10A {Mycobacterium tuberculosis} SCOP:
c.1.13.1 PDB: 1n8w_A* 2gq3_A*
Length = 741
Score = 31.3 bits (71), Expect = 1.5
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 21/68 (30%)
Query: 237 TLHSFSYKVIN--ERKAELKARKNTEDETIEDPTEHVKKRPAFLD--LLIEASERHNLTD 292
TLH+ Y ++ + L + R A ++ L I ++
Sbjct: 549 TLHALHYHQVDVAAVQQGLAGK-----------------RRATIEQLLTIPLAKELAWAP 591
Query: 293 ENIREEVD 300
+ IREEVD
Sbjct: 592 DEIREEVD 599
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria
translocation, allosteric REG phosphoprotein, TPR
repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae}
PDB: 3fp3_A 3fp4_A 3lca_A
Length = 537
Score = 30.5 bits (69), Expect = 2.4
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 18/89 (20%)
Query: 328 QNKVYEEIVATSPKASSLKPFTTRSLNSM--------KYLEA--CIKEALRLYPSVP--- 374
+Y +++ + L+ +L L+A ++E++ L+P+
Sbjct: 221 STDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYI 280
Query: 375 ---FIARKLGNKVYEEIVATSSKASSLKP 400
N +E KA L P
Sbjct: 281 FLALTLADKEN--SQEFFKFFQKAVDLNP 307
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha
helix, antivirus, antiviral protein; 2.80A {Homo
sapiens}
Length = 472
Score = 30.7 bits (69), Expect = 2.4
Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 11/119 (9%)
Query: 318 LLLLGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSM--------KYLEA--CIKEAL 367
L L + + E +A P T L S + +A +K+AL
Sbjct: 215 LALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKAL 274
Query: 368 RLYPSVPFIARKLGNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEACIKEALRLYPS 426
P+ ++ ++G Y V + + L + + A +K+A +
Sbjct: 275 EYIPNNAYLHCQIGC-CYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDN 332
Score = 30.3 bits (68), Expect = 2.9
Identities = 13/110 (11%), Positives = 27/110 (24%), Gaps = 24/110 (21%)
Query: 321 LGSNQEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 380
G+ Q Q K ++ + + + + L+ K L + L
Sbjct: 377 YGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVL 436
Query: 381 GNKVYEEIVATSSKASSLKPFTTIRSLNSMKYLEA--CIKEALRLYPSVP 428
+ E + K +A + L +P
Sbjct: 437 AF-LQEL---------------------NEKMQQADEDSERGLESGSLIP 464
Score = 28.7 bits (64), Expect = 7.5
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 23/127 (18%)
Query: 325 QEIQNKVYEEIVATSPKASSLKPFTTRSLNSMKYLEA--CIKEALRLYPSVPFIARKLGN 382
+ + K SP+ + +T + A C ++AL P P L
Sbjct: 121 KHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAI 180
Query: 383 KVY--------EEIVATSSKASSLKP-------------FTTIRSLNSMKYLEACIKEAL 421
Y + + +A L P E ++EAL
Sbjct: 181 ASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEAL 240
Query: 422 RLYPSVP 428
P V
Sbjct: 241 EKAPGVT 247
>1few_A Second mitochondria-derived activator of caspases; SMAC, diablo,
apoptosis, caspase activation, IAP inhibition; 2.20A
{Homo sapiens} SCOP: a.7.4.1
Length = 184
Score = 29.9 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 212 DSNSEYVKAVYELSSLYKKHQRCLNTLHSFS----YKVINERKAELKARKN 258
++ +EY KAVY L+SLY+++ L ++S ++VI +AE+ ++
Sbjct: 43 EAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSKHQ 93
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase,
maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga
maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Length = 637
Score = 29.8 bits (66), Expect = 4.4
Identities = 6/44 (13%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 496 RDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYI 539
++ + I++ N+ ++ K +++ G++ E P +
Sbjct: 590 KNGQKIVIAANVGKEPKEITGGRVWN-GKWSDEEKVVLKPLEFA 632
Score = 29.8 bits (66), Expect = 4.4
Identities = 6/44 (13%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 704 RDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYI 747
++ + I++ N+ ++ K +++ G++ E P +
Sbjct: 590 KNGQKIVIAANVGKEPKEITGGRVWN-GKWSDEEKVVLKPLEFA 632
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 29.8 bits (67), Expect = 5.2
Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 48/138 (34%)
Query: 646 IVATSPKASSLKPFTTRSLNSMKYLEACIKEA-LRLYPSVPF-IARKLSEDV-PLPDYVL 702
+V TS T S+ Y + K + L + VPF K +DV L +++
Sbjct: 505 VVTTS----RFSKQVTDYYQSI-YAKYGAKGSTLIV---VPFNQGSK--QDVEALIEFI- 553
Query: 703 PRDTEVIIVVYNLHRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNC-----I 757
Y+ ++ + + IPF+A P I
Sbjct: 554 ----------YDTEKNGGLGWDLDAI------------------IPFAAIPEQGIELEHI 585
Query: 758 GQKFAMLEEKVILANILR 775
K + +++L NILR
Sbjct: 586 DSK-SEFAHRIMLTNILR 602
Score = 29.5 bits (66), Expect = 5.4
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 35/126 (27%)
Query: 496 RDTEVIIVVYNL--HRDAKVFPRPELYDPGRFLSENAAGRNPYGYIPFSAGPRNC----- 548
+ + +I+V +N +D + +YD G + IPF+A P
Sbjct: 529 KGSTLIVVPFNQGSKQDVEALIE-FIYDTE---KNGGLGWDLDAIIPFAAIPEQGIELEH 584
Query: 549 IGQKFAMLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRVMFGVDTSRD--- 605
I K + +++L NILR ++G + + G++T R
Sbjct: 585 IDSK-SEFAHRIMLTNILR--------------MMGCVKKQKSA-----RGIET-RPAQV 623
Query: 606 VAPVSP 611
+ P+SP
Sbjct: 624 ILPMSP 629
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM;
2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3
Length = 720
Score = 28.9 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Query: 289 NLTDENIR-EEVDTFMFEGHDTTSAAICWTL----LLLGSNQE 326
NLTD N + ++E D + + WT L+ GSN
Sbjct: 641 NLTDMNYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSI 683
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 28.2 bits (62), Expect = 8.4
Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 8/47 (17%)
Query: 219 KAVYELSSLYKKHQRCLNTLHSFSYKVINE-RKAELKARKNTEDETI 264
KA +L ++ + K R A+ + + + I
Sbjct: 115 KAKKDLEEWNQRQSEQVE-------KNKINNRIADKAFYQQPDADII 154
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate
derivative of L- arginine, hydrolase; HET: KCX M3R;
1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Length = 403
Score = 28.8 bits (65), Expect = 8.5
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 401 FTTIRSLNSMKYLEACIKEAL--------RLYPSVPFIA 431
FTT+R++ + Y + ++EA+ R+ +
Sbjct: 102 FTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFG 140
>2nvm_A FDXN element excision controlling factor XISI; YP_321976.1,
structural genomics, PSI-2, protein structure
initiative; 2.19A {Anabaena variabilis atcc 29413} SCOP:
d.326.1.1
Length = 126
Score = 27.6 bits (61), Expect = 8.5
Identities = 3/41 (7%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 141 WHQRRKILTPAFHFRILEDFVEVFQEQSEVLV-RRLGEVGV 180
W ++++ + +I + + ++ + + + + G+
Sbjct: 63 WDGKKRVQHIILYLQIQNGKIWIEEDSTNLAIVDEMLVAGI 103
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2,
structure initiative, joint center for structural
genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Length = 114
Score = 27.4 bits (61), Expect = 8.7
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 141 WHQRRKILTPAFHFRILEDFVEVFQEQSEVLV-RRLGEVGV 180
W ++I H RI + + + ++ +E + L +GV
Sbjct: 51 WQGSKRIKYTYVHIRIKNEKIYIEEDYTEEGIATELMRLGV 91
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2,
amidohydrolase, structural genomics; 1.70A
{Bifidobacterium longum NCC2705} SCOP: b.92.1.10
c.1.9.17
Length = 458
Score = 28.6 bits (64), Expect = 8.9
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 401 FTTIRSLNSMKYLEACIKEAL--------RLYPSVPFIA 431
TTIR+L + Y +++ + R+ S P +A
Sbjct: 129 VTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMA 167
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source,
amidohydrolase, sargasso SEA, structural GEN protein
structure initiative, PSI; HET: ARG; 2.30A
{Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Length = 408
Score = 28.5 bits (64), Expect = 9.8
Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 401 FTTIRSLNSMKYLEACIKEAL--------RLYPSVPFIA 431
FTT+R++ + Y + +++A+ + S P +
Sbjct: 101 FTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALG 139
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.267 0.0585 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 12,617,517
Number of extensions: 800670
Number of successful extensions: 2379
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1966
Number of HSP's successfully gapped: 313
Length of query: 809
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 708
Effective length of database: 3,881,772
Effective search space: 2748294576
Effective search space used: 2748294576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.6 bits)