RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4754
(304 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 109 bits (272), Expect = 3e-28
Identities = 85/281 (30%), Positives = 123/281 (43%), Gaps = 43/281 (15%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 89
++ + RLL + D + +WDS +V+ + + V +P G + G D
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118
Query: 90 TTLRCRLFDLRADKEVA-----------------------------------------CY 108
R
Sbjct: 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178
Query: 109 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG 168
S+ + RL +G D + +WD + GHE+ ++ + P+G
Sbjct: 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 169 TAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV 228
AF++GS D T CRLFDLRAD+E+ Y D+I+ G TSV FS SGRLL AGY+D+ NV
Sbjct: 239 NAFATGSDDAT--CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 229 WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
WD+LK R L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
Score = 71.7 bits (174), Expect = 8e-15
Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 5/217 (2%)
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFS 123
L GH ++ + D S S D L + + + ++
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWV----MTCAYA 106
Query: 124 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCR 183
SG + G D ++++ N + E +S + ++
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREG-NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 184 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH 243
+ S+ + RL +G D + +WD + GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 244 ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYMQY 280
E+ ++ + P+G AF++GS D T R + +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 69.0 bits (167), Expect = 7e-14
Identities = 53/90 (58%), Positives = 66/90 (73%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
CRLFDLRAD+E+ Y D+I+ G TSV FS SGRLL AGY+D+ NVWD+LK R
Sbjct: 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
Score = 63.2 bits (152), Expect = 6e-12
Identities = 18/146 (12%), Positives = 44/146 (30%), Gaps = 12/146 (8%)
Query: 1 MGKNHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV--WDSLKC 58
+L+D+R + ++ F +G G +D T + + +
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHE--SDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260
Query: 59 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYK--KDSILFG 116
++ + S G +G D C ++D + +
Sbjct: 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN--CNVWDALKADRAGVLAGHDNRV--- 315
Query: 117 ATSVDFSVSGRLLFAGYNDYTINVWD 142
+ + + G + G D + +W+
Sbjct: 316 -SCLGVTDDGMAVATGSWDSFLKIWN 340
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 90.6 bits (223), Expect = 2e-21
Identities = 58/256 (22%), Positives = 87/256 (33%), Gaps = 20/256 (7%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 89
T V F ++ + D TI VWD L GH + V + G
Sbjct: 21 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL----AS 76
Query: 90 TTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV 149
+ + +SV +G + + D TI +W+ V
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136
Query: 150 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCR-------LFDLRADKEVAC------- 195
GH V ++ + DGT +S S D T+R +LR + V
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 196 --YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVS 253
Y S G+ + G L +G D TI +WD + L+GH+N V +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256
Query: 254 PDGTAFSSGSWDTTLR 269
G S + D TLR
Sbjct: 257 SGGKFILSCADDKTLR 272
Score = 85.9 bits (211), Expect = 6e-20
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
+G + + D TI +W+ V GH V ++ + DGT +S S D T+R
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 94 CR-------LFDLRADKEVAC---------YKKDSILFGATSVDFSVSGRLLFAGYNDYT 137
+LR + V Y S G+ + G L +G D T
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 138 INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYK 197
I +WD + L+GH+N V + G S + D TLR ++D + + +
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR--VWDYKNKRCMKTLN 286
Query: 198 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 230
TS+DF + + G D T+ VW+
Sbjct: 287 AHE--HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 71.7 bits (174), Expect = 6e-15
Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 33 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ----------------- 75
+ G L+ + ND T+ VW L H + V C+
Sbjct: 150 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE 209
Query: 76 ---VSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 132
G SGS D T++ ++D+ + V F G+ + +
Sbjct: 210 TKKSGKPGPFLLSGSRDKTIK--MWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSC 265
Query: 133 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
+D T+ VWD + L HE+ V+ L +GS D T++
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 314
Score = 68.2 bits (165), Expect = 9e-14
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 28 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
G+ + G L +G D TI +WD + L+GH+N V + G S +
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 266
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 142
D TLR ++D + + + TS+DF + + G D T+ VW+
Sbjct: 267 DDKTLR--VWDYKNKRCMKTLNAHE--HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 64.8 bits (156), Expect = 1e-12
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 8/202 (3%)
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFS 123
L GH + V+ + P + S S D T+ +++D K + + F
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATI--KVWDYETGDFERTLKGHTD--SVQDISFD 68
Query: 124 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCR 183
SG+LL + D TI +WD + + GH++ VS + + P+G S S D T++
Sbjct: 69 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128
Query: 184 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH 243
+ ++ + V + G L+ + ND T+ VW L H
Sbjct: 129 EVQTGYCVKTFTGHREWV----RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 184
Query: 244 ENRVSCLQVSPDGTAFSSGSWD 265
+ V C+ +P+ + S
Sbjct: 185 RHVVECISWAPESSYSSISEAT 206
Score = 60.9 bits (146), Expect = 3e-11
Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 4/166 (2%)
Query: 118 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 177
T V F ++ + D TI VWD L GH + V + G
Sbjct: 21 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL----AS 76
Query: 178 TTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV 237
+ + +SV +G + + D TI +W+ V
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136
Query: 238 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYMQYLLR 283
GH V ++ + DGT +S S D T+R + + LR
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182
Score = 57.1 bits (136), Expect = 5e-10
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
+++D+ + V F G+ + + +D T+ VWD +
Sbjct: 227 KTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 284
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
L HE+ V+ L +GS D T++
Sbjct: 285 LNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 314
Score = 35.9 bits (81), Expect = 0.005
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 240 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
L GH + V+ + P + S S D T++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIK 42
Score = 33.6 bits (75), Expect = 0.027
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 54
R++D + + + TS+DF + + G D T+ VW+
Sbjct: 269 KTLRVWDYKNKRCMKTLNAHE--HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 85.2 bits (209), Expect = 2e-19
Identities = 61/261 (23%), Positives = 89/261 (34%), Gaps = 25/261 (9%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 89
SV FS G+ L G D I +WD V L GHE + L P G SGS D
Sbjct: 125 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 184
Query: 90 TTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC--- 146
T+R + G+ + AG D + VWDS
Sbjct: 185 RTVRIWDLRTGQCSLTLSIEDGVTTVAV----SPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 147 ----CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSIL 202
GH++ V + + DG + SGS D +++ +K +
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 203 F--------GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV-- 252
SV + + + +G D + WD + L GH N V + V
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360
Query: 253 ----SPDGTAFSSGSWDTTLR 269
P+ F++GS D R
Sbjct: 361 GSSLGPEYNVFATGSGDCKAR 381
Score = 74.8 bits (182), Expect = 7e-16
Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 23/176 (13%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKC-------CRVNHLMGHENRVSCLQVSPDGTAFSSG 86
G+ + AG D + VWDS GH++ V + + DG + SG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 87 SWDTTLRCRLFDLRADKEVACYKKDSILF--------GATSVDFSVSGRLLFAGYNDYTI 138
S D +++ +K + SV + + + +G D +
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332
Query: 139 NVWDSLKCCRVNHLMGHENRVSCLQV------SPDGTAFSSGSWDTTLRCRLFDLR 188
WD + L GH N V + V P+ F++GS D R++ +
Sbjct: 333 LFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA--RIWKYK 386
Score = 67.1 bits (162), Expect = 3e-13
Identities = 61/268 (22%), Positives = 92/268 (34%), Gaps = 35/268 (13%)
Query: 29 ATSVDFSVSGRLLFAGYNDYTINVWDSL--KCCRVN--HLMGHENRVSCLQVSPDGTAFS 84
+D L NDY +++ + V + H + V C++ S DG +
Sbjct: 20 LLDLDSQSVPDALKKQTNDY-YILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLA 78
Query: 85 SGSWDTTLRCRLFDLRADKEVACYKKDSILFGA----------------TSVDFSVSGRL 128
+G TT +++ + VA DS SV FS G+
Sbjct: 79 TGCNKTT---QVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 135
Query: 129 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLR 188
L G D I +WD V L GHE + L P G SGS D T+R
Sbjct: 136 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 195
Query: 189 ADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-------CRVNHLM 241
+ G+ + AG D + VWDS
Sbjct: 196 QCSLTLSIEDGVTTVAV----SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Query: 242 GHENRVSCLQVSPDGTAFSSGSWDTTLR 269
GH++ V + + DG + SGS D +++
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVK 279
Score = 53.3 bits (126), Expect = 1e-08
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV------SPDGTAF 83
SV + + + +G D + WD + L GH N V + V P+ F
Sbjct: 312 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 371
Query: 84 SSGSWDTTLRCRLFDLR 100
++GS D R++ +
Sbjct: 372 ATGSGDCKA--RIWKYK 386
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 70.6 bits (171), Expect = 2e-14
Identities = 33/284 (11%), Positives = 73/284 (25%), Gaps = 51/284 (17%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWD-----SLKCCRVNHLMGHENRVSCLQVSPDGTAFS 84
+V S R ++ G + VWD + + +N + ++ PDG
Sbjct: 55 CAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLI 113
Query: 85 SGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 144
G +TL + A + A ++ + + +
Sbjct: 114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 173
Query: 145 KCCRVNHLM---------------------------------------GHENRVSCLQVS 165
R +++ L
Sbjct: 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYC 233
Query: 166 PDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYT 225
P G + G + + + ++ ++ + S+ F+ G+ + D
Sbjct: 234 PTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL-----SLKFAYCGKWFVSTGKDNL 288
Query: 226 INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+N W + + + V +S D +GS D
Sbjct: 289 LNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSGDKKAT 331
Score = 57.1 bits (136), Expect = 6e-10
Identities = 18/135 (13%), Positives = 45/135 (33%), Gaps = 8/135 (5%)
Query: 53 WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDS 112
L+ R +++ L P G + G + + + ++ ++
Sbjct: 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCV 268
Query: 113 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS 172
+ S+ F+ G+ + D +N W + + + V +S D
Sbjct: 269 L-----SLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIV 322
Query: 173 SGSWDTTLRCRLFDL 187
+GS D ++++
Sbjct: 323 TGSGDKKA--TVYEV 335
Score = 54.4 bits (129), Expect = 4e-09
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 31 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 90
S+ F+ G+ + D +N W + + + V +S D +GS D
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSGDK 328
Query: 91 TLRCRLFDL 99
++++
Sbjct: 329 KA--TVYEV 335
Score = 50.2 bits (118), Expect = 1e-07
Identities = 41/186 (22%), Positives = 65/186 (34%), Gaps = 11/186 (5%)
Query: 45 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKE 104
+D I VWD V GH + SC+ +S DGT +G D T+R E
Sbjct: 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR-----E 214
Query: 105 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 164
++ S+ + +G A + + + L HE+ V L+
Sbjct: 215 GRQLQQHDFTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKF 273
Query: 165 SPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY 224
+ G F S D L + + K+ S S D SV + + G D
Sbjct: 274 AYCGKWFVSTGKDNLLN--AWRTPYGASIFQSKESS---SVLSCDISVDDKYIVTGSGDK 328
Query: 225 TINVWD 230
V++
Sbjct: 329 KATVYE 334
Score = 46.0 bits (107), Expect = 3e-06
Identities = 33/278 (11%), Positives = 70/278 (25%), Gaps = 40/278 (14%)
Query: 31 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 90
S + G++ + + + R + + H V + +S +G
Sbjct: 14 SFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGC 73
Query: 91 TLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN 150
+ V+ + S G L G T+++WD
Sbjct: 74 VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI 133
Query: 151 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGA----- 205
+ +C ++ + S + ++DL V ++ +
Sbjct: 134 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193
Query: 206 ----------------------------------TSVDFSVSGRLLFAGYNDYTINVWDS 231
S+ + +G A + +
Sbjct: 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLH 252
Query: 232 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ L HE+ V L+ + G F S D L
Sbjct: 253 VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290
Score = 32.9 bits (73), Expect = 0.043
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 54
N + + K+ S S D SV + + G D V++
Sbjct: 287 NLLNAWRTPYGASIFQSKESS---SVLSCDISVDDKYIVTGSGDKKATVYE 334
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 69.5 bits (168), Expect = 5e-14
Identities = 31/258 (12%), Positives = 80/258 (31%), Gaps = 18/258 (6%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
+ ++ + N++ +++++ K +V+ L H +V+ + +PD +
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 147
D R K + + + + +G +I ++
Sbjct: 71 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 130
Query: 148 RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVA------------- 194
V + R + L + + + +CR+F +
Sbjct: 131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 190
Query: 195 ---CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ 251
++ S V FS +G + +D T+ + D+ K V L + +
Sbjct: 191 GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVT 250
Query: 252 VSPDGTAFSSGSWDTTLR 269
+ + ++G +
Sbjct: 251 FITESSLVAAGHDCFPVL 268
Score = 51.8 bits (122), Expect = 3e-08
Identities = 29/218 (13%), Positives = 62/218 (28%), Gaps = 4/218 (1%)
Query: 71 VSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 130
+SC + D T + + + +++ +K V ++ T VD++ +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEV--HIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 131 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRAD 190
D VW L+ + V + + +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 191 KE--VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS 248
+ V + K I S+D+ + LL AG D+ ++ +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 249 CLQVSPDGTAFSSGSWDTTLRDEESKNRYMQYLLRSRI 286
+ SS W + + +R S +
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 225
Score = 49.9 bits (117), Expect = 2e-07
Identities = 34/237 (14%), Positives = 68/237 (28%), Gaps = 14/237 (5%)
Query: 41 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA----FSSGSWDTTLRCRL 96
+ + V L H N V S D +
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183
Query: 97 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE 156
+ + ++ S V FS +G + +D T+ + D+ K V L
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 157 NRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 216
+ + + + ++G + +D A K + D S ++ R
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVL-FTYDSAAGKLSFGGRLDV---PKQSSQRGLTARE 299
Query: 217 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG----TAFSSGSWDTTLR 269
F + + + ++ H+N VS + V G + F + D +
Sbjct: 300 RFQNLDKKASSEGSAAAGAGLDS--LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 354
Score = 48.3 bits (113), Expect = 4e-07
Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 12/168 (7%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 89
V FS +G + +D T+ + D+ K V L + + + + ++G
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264
Query: 90 TTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV 149
+ +D A K + D S ++ R F + + + +
Sbjct: 265 FPVL-FTYDSAAGKLSFGGRLDV---PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 320
Query: 150 NHLMGHENRVSCLQVSPDG----TAFSSGSWDTTLRCRLFDLRADKEV 193
+ H+N VS + V G + F + D + ++D+R+ +
Sbjct: 321 DS--LHKNSVSQISVLSGGKAKCSQFCTTGMDGGM--SIWDVRSLESA 364
Score = 42.5 bits (98), Expect = 4e-05
Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 25/293 (8%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
+ +++ +K V ++ T VD++ + D VW
Sbjct: 29 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 88
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILF--GATSVD 121
L+ + V + + + + K S+D
Sbjct: 89 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 148
Query: 122 FSVSGRLLFAGYNDYTINVWD------------------SLKCCRVNHLMGHENRVSCLQ 163
+ + LL AG D+ ++ + V +
Sbjct: 149 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 208
Query: 164 VSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND 223
S +G+ + S D+T+ D + + +L + L+ AG++
Sbjct: 209 FSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE----SSLVAAGHDC 264
Query: 224 YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 276
++ G + + D E S
Sbjct: 265 -FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 316
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 66.0 bits (159), Expect = 7e-13
Identities = 49/269 (18%), Positives = 88/269 (32%), Gaps = 41/269 (15%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
G + +G +D T+ VW ++ + L+GH V Q+ + S +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVW 82
Query: 94 C------RLFDLRADKEVACYKKDSILFGATSVDFSV----------------------- 124
V C + S D ++
Sbjct: 83 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 142
Query: 125 ---SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
GR + +G D+ + VWD ++ L GH NR + DG SGS DT+
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR--VYSLQFDGIHVVSGSLDTS-- 198
Query: 182 CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 241
R++D+ + + + + +L +G D T+ +WD + L
Sbjct: 199 IRVWDVETGNCIHTLTG----HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 254
Query: 242 GHENRVS-CLQVSPDGTAFSSGSWDTTLR 269
G S + + + S D T++
Sbjct: 255 GPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Score = 61.8 bits (148), Expect = 2e-11
Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 18/231 (7%)
Query: 44 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADK 103
G D T+ VWD ++ LMGH V C+Q + + +++D +
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF----MVKVWDPETET 168
Query: 104 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ 163
+ + + + D G + +G D +I VWD ++ L GH++ S
Sbjct: 169 CLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-- 222
Query: 164 VSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND 223
+ SG+ D+T++ ++D++ + + + + + + + +D
Sbjct: 223 MELKDNILVSGNADSTVK--IWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDD 279
Query: 224 YTINVWD-----SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
T+ +WD ++ G V ++ S + GS + T
Sbjct: 280 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE 330
Score = 59.8 bits (143), Expect = 7e-11
Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 14/195 (7%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
+++D + + + + + D G + +G D +I VWD ++
Sbjct: 157 FMVKVWDPETETCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSIRVWDVETGNCIHT 212
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFS 123
L GH++ S + SG+ D+T++ ++D++ + + + + +
Sbjct: 213 LTGHQSLTSG--MELKDNILVSGNADSTVK--IWDIKTGQCLQTLQGPNK-HQSAVTCLQ 267
Query: 124 VSGRLLFAGYNDYTINVWD-----SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 178
+ + +D T+ +WD ++ G V ++ S + GS +
Sbjct: 268 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
Query: 179 TLRCRLFDLRADKEV 193
T +L L D ++
Sbjct: 328 TEETKLLVLDFDVDM 342
Score = 52.5 bits (124), Expect = 2e-08
Identities = 45/217 (20%), Positives = 71/217 (32%), Gaps = 17/217 (7%)
Query: 53 WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDS 112
W + L GH++ V + G SGS D TL +++ K +
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTL--KVWSAVTGKCLRTLV--- 54
Query: 113 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS 172
G T +S R + + + + +
Sbjct: 55 ---GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 111
Query: 173 SGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 232
SGS D TLR + V ++ GR + +G D+ + VWD
Sbjct: 112 SGSRDATLRVWDIETGQCLHVLMGHVAAV------RCVQYDGRRVVSGAYDFMVKVWDPE 165
Query: 233 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
++ L GH NR + DG SGS DT++R
Sbjct: 166 TETCLHTLQGHTNR--VYSLQFDGIHVVSGSLDTSIR 200
Score = 41.0 bits (94), Expect = 1e-04
Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 1 MGKNHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD-----S 55
+ +++D++ + + + + + + + +D T+ +WD
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEF 292
Query: 56 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEV 105
++ G V ++ S + GS + T +L L D ++
Sbjct: 293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 342
Score = 38.6 bits (88), Expect = 6e-04
Identities = 13/71 (18%), Positives = 26/71 (36%)
Query: 210 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
G + +G +D T+ VW ++ + L+GH V Q+ + S +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVW 82
Query: 270 DEESKNRYMQY 280
+ E+
Sbjct: 83 NAETGECIHTL 93
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 60.6 bits (145), Expect = 4e-11
Identities = 16/172 (9%), Positives = 42/172 (24%), Gaps = 16/172 (9%)
Query: 38 GRLLFAGYNDYTINVWDSL-------KCCRVNHLMGHENRVSCLQVSPDGTAFSSGS--- 87
+ L+ D + + + + ++ P +G
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 147
D R ++ +S + + + +D
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT-- 307
Query: 148 RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKD 199
+ +N ++ L++S D D + F L ++ + D
Sbjct: 308 --RKVTEVKNNLTDLRLSADRKTVMVRKDDGKI--YTFPLEKPEDERTVETD 355
Score = 60.3 bits (144), Expect = 5e-11
Identities = 19/235 (8%), Positives = 52/235 (22%), Gaps = 19/235 (8%)
Query: 45 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKE 104
V + + + +N P + G + + R
Sbjct: 114 LETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--- 170
Query: 105 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-------KCCRVNHLMGHEN 157
+ + + F + L+ D + + +
Sbjct: 171 --IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 228
Query: 158 RVSCLQVSPDGTAFSSGS---WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSG 214
+ ++ P +G D R ++ +S + +
Sbjct: 229 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA 288
Query: 215 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ +D + +N ++ L++S D D +
Sbjct: 289 AYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIY 339
Score = 48.7 bits (114), Expect = 3e-07
Identities = 20/197 (10%), Positives = 44/197 (22%), Gaps = 19/197 (9%)
Query: 45 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR---CRLFDLRA 101
Y I+V+D ++ ++ + D S+ + + +
Sbjct: 156 YVMQAIHVYD-MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF 214
Query: 102 DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-------RVNHLMG 154
+ + I AG D S + L
Sbjct: 215 EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES 274
Query: 155 HENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSG 214
S + L +D++ K + T + S
Sbjct: 275 SILIYSVPVHGEFAAYYQGAPEKGVLL--KYDVKTRKVTE------VKNNLTDLRLSADR 326
Query: 215 RLLFAGYNDYTINVWDS 231
+ + +D I +
Sbjct: 327 KTVMVRKDDGKIYTFPL 343
Score = 47.5 bits (111), Expect = 9e-07
Identities = 29/287 (10%), Positives = 69/287 (24%), Gaps = 18/287 (6%)
Query: 31 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 90
+ DFS L A + + D + + R+ ++ D
Sbjct: 7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTRE 64
Query: 91 TLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN 150
++D R K + +F ++ +G+ + + I D
Sbjct: 65 GDFLGIYDYRTGKAEKFEENLGNVF---AMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 151 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEV-----ACYKKDSILFGA 205
E ++ +S + + G + ++A + +
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181
Query: 206 TSVDFSVSGRLLFAGYNDYTINVWDSL-------KCCRVNHLMGHENRVSCLQVSPDGTA 258
+ F + L+ D + + + + ++ P
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMT 241
Query: 259 FSSGS-WDTTLRDEESKNRYMQYLLRSRITKPTQGLTVYFQDRGRSI 304
+G + S R I + L G
Sbjct: 242 SEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA 288
Score = 43.3 bits (100), Expect = 2e-05
Identities = 10/108 (9%), Positives = 27/108 (25%), Gaps = 6/108 (5%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
++ +S + + + +D
Sbjct: 254 KRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----RK 309
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKD 111
+ +N ++ L++S D D + F L ++ + D
Sbjct: 310 VTEVKNNLTDLRLSADRKTVMVRKDDGKI--YTFPLEKPEDERTVETD 355
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 60.2 bits (144), Expect = 5e-11
Identities = 28/295 (9%), Positives = 69/295 (23%), Gaps = 30/295 (10%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVWDS-----LK 57
+ + D + GR+ + ++ D L
Sbjct: 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG 70
Query: 58 CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEV-------ACYKK 110
++ + +SPDG + L F+++ + + K
Sbjct: 71 RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130
Query: 111 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV----NHLMGHENRVSCLQVSP 166
T + ++ G L+ D + ++ + + L V
Sbjct: 131 FEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN 190
Query: 167 DGTAFSSGSWDTTLRC----RLFDLRADKEVA--------CYKKDSILFGATSVDFSVSG 214
+ + + ++ + +V+
Sbjct: 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP 250
Query: 215 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
A + +D L+ + + + VS DG+ G L
Sbjct: 251 AKTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLA 304
Score = 45.6 bits (106), Expect = 3e-06
Identities = 17/151 (11%), Positives = 37/151 (24%), Gaps = 8/151 (5%)
Query: 44 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADK 103
+ + H D ++ T L DL +
Sbjct: 173 QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL--TMDLETGE 230
Query: 104 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ 163
++ + +V+ A + +D L+ + + +
Sbjct: 231 MAM---REVRIMDVFYFSTAVNPAKTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVN 286
Query: 164 VSPDGTAFSSGSWDTTLRCRLFDLRADKEVA 194
VS DG+ G L +D ++
Sbjct: 287 VSTDGSTVWLGGALGDL--AAYDAETLEKKG 315
Score = 40.6 bits (93), Expect = 1e-04
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 32 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT 91
+V+ A + +D L+ + + + VS DG+ G
Sbjct: 244 FSTAVNPAKTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD 302
Query: 92 LRCRLFDLRADKEVA 106
L +D ++
Sbjct: 303 L--AAYDAETLEKKG 315
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 58.3 bits (139), Expect = 2e-10
Identities = 52/281 (18%), Positives = 88/281 (31%), Gaps = 56/281 (19%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
+ + +G D TI +WD L GH V CLQ S +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW 80
Query: 94 C------------------------------------RLFDLRADKEVACYKKDSILFGA 117
++D+ + ++ ++ + A
Sbjct: 81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRA 139
Query: 118 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 177
+ + + D TI VW++ C V L GH+ ++C + SGS D
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSD 197
Query: 178 TTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR- 236
T+R L+D+ + + L D + + +G D I VWD +
Sbjct: 198 NTIR--LWDIECGACLRVLEGHEELVRCIRFDN----KRIVSGAYDGKIKVWDLVAALDP 251
Query: 237 --------VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ L+ H RV + D S S D T+
Sbjct: 252 RAPAGTLCLRTLVEHSGRVFR--LQFDEFQIVSSSHDDTIL 290
Score = 43.3 bits (100), Expect = 2e-05
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 16/192 (8%)
Query: 45 YNDYTINVWDSLKC-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADK 103
D +I VWD + +R + V D S S D T ++++ +
Sbjct: 112 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWNTSTCE 169
Query: 104 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ 163
V RL+ +G +D TI +WD + L GHE
Sbjct: 170 FVRTLNGHKR----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRC 223
Query: 164 VSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATS-----VDFSVSGRLLF 218
+ D SG++D +++DL A + L +
Sbjct: 224 IRFDNKRIVSGAYDGK--IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIV 281
Query: 219 AGYNDYTINVWD 230
+ +D TI +WD
Sbjct: 282 SSSHDDTILIWD 293
Score = 38.3 bits (87), Expect = 6e-04
Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 13/146 (8%)
Query: 2 GKNHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV 61
G ++++ + V RL+ +G +D TI +WD +
Sbjct: 156 GDRTIKVWNTSTCEFVRTLNGHKR----GIACLQYRDRLVVSGSSDNTIRLWDIECGACL 211
Query: 62 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATS-- 119
L GHE + D SG++D +++DL A + L
Sbjct: 212 RVLEGHEE--LVRCIRFDNKRIVSGAYDGK--IKVWDLVAALDPRAPAGTLCLRTLVEHS 267
Query: 120 ---VDFSVSGRLLFAGYNDYTINVWD 142
+ + +D TI +WD
Sbjct: 268 GRVFRLQFDEFQIVSSSHDDTILIWD 293
Score = 25.2 bits (53), Expect = 9.8
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 5/59 (8%)
Query: 1 MGKNHCRLFDLRADKEVACYKKDSILFGATS-----VDFSVSGRLLFAGYNDYTINVWD 54
+++DL A + L + + +D TI +WD
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 58.2 bits (139), Expect = 2e-10
Identities = 39/305 (12%), Positives = 74/305 (24%), Gaps = 45/305 (14%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLKCCRVN 62
N+ + D+ +D FG + + R + + I D C
Sbjct: 18 NNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 76
Query: 63 HLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRC----------RLFDLRADKEVA 106
H + +SPDG + T +F E
Sbjct: 77 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK 136
Query: 107 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD------------------SLKCCR 148
+ + + + G L AG + Y ++V +
Sbjct: 137 PVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 196
Query: 149 VNHLMGHENRVSCL----QVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFG 204
+ S L + D ++ DL+ K D
Sbjct: 197 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL--SVDLKTGKTHTQEFADLTELY 254
Query: 205 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 264
T + ++ N + +D LK ++ ++ C+ G G
Sbjct: 255 FTGLRSPKDPNQIYGVLN--RLAKYD-LKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGT 311
Query: 265 DTTLR 269
L
Sbjct: 312 FNDLA 316
Score = 49.4 bits (116), Expect = 2e-07
Identities = 23/174 (13%), Positives = 44/174 (25%), Gaps = 20/174 (11%)
Query: 74 LQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AG 132
+ ++ L + D+ +D FG + + R +
Sbjct: 2 PALKAGHEYMIVTNYPNNL--HVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLN 58
Query: 133 YNDYTINVWDSLKCCRVNHLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRC---- 182
+ I D C H + +SPDG + T
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 183 ------RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 230
+F E + + + + G L AG + Y ++V
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172
Score = 45.5 bits (106), Expect = 3e-06
Identities = 29/267 (10%), Positives = 55/267 (20%), Gaps = 43/267 (16%)
Query: 1 MGKNHCRLFDLRADKEVACYKKDSILFGATS----VDFSVSGRLLFAGYNDYTINVWDSL 56
DL K S+ S G+ ++A N +
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 57 --------------KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRAD 102
+ +V ++ + DG+ + +G + +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 103 KEV------------------ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 144
+ + T F + Y D
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Query: 145 KCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILF 203
SP G + +DL+ K + D
Sbjct: 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR---LAKYDLKQRKLIKAANLDH--- 292
Query: 204 GATSVDFSVSGRLLFAGYNDYTINVWD 230
V F G L+ G + V++
Sbjct: 293 TYYCVAFDKKGDKLYLGGTFNDLAVFN 319
Score = 44.0 bits (102), Expect = 1e-05
Identities = 26/216 (12%), Positives = 55/216 (25%), Gaps = 29/216 (13%)
Query: 1 MGKNHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD------ 54
+ +F E + + + + G L AG + Y ++V
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 55 ------------SLKCCRVNHLMGHENRVSCL----QVSPDGTAFSSGSWDTTLRCRLFD 98
+ + S L + D ++ D
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL--SVD 236
Query: 99 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR 158
L+ K D T + ++ N + +D LK ++ ++
Sbjct: 237 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN--RLAKYD-LKQRKLIKAANLDHT 293
Query: 159 VSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVA 194
C+ G G L +F+ ++V
Sbjct: 294 YYCVAFDKKGDKLYLGGTFNDL--AVFNPDTLEKVK 327
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 55.4 bits (132), Expect = 2e-09
Identities = 21/276 (7%), Positives = 55/276 (19%), Gaps = 45/276 (16%)
Query: 28 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS--- 84
G+ S S G + V+D + + + + +
Sbjct: 76 GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135
Query: 85 -----SGSWDTTLRCRLFDLRADKEVACYK-KDSILFGATS----VDFSVSGRLLFAGYN 134
+ + + K + S L +
Sbjct: 136 ACLLFFLFGSSAAA--GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193
Query: 135 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVA 194
Q + G + + D+ A
Sbjct: 194 AAPAAAG----IVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQ----GDIPAAGATM 245
Query: 195 CYKKDSILFGATSVDFSVSGRLLFAGYNDY-------------------TINVWDSLKCC 235
D G + +F +G + A + +
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT-ASVG 304
Query: 236 RVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLR 269
+ + + + + + + DG +++ + L
Sbjct: 305 QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340
Score = 47.7 bits (112), Expect = 9e-07
Identities = 18/188 (9%), Positives = 46/188 (24%), Gaps = 32/188 (17%)
Query: 28 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
AT S L + Q + G + +
Sbjct: 175 AATHYLGSCPASLAASDLAAAPAAAG----IVGAQCTGAQNCSSQAAQANYPGMLVWAVA 230
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY----------- 136
D+ A D G + +F +G + A +
Sbjct: 231 SSILQ----GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286
Query: 137 --------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLRCRLFD 186
+ + + + + + + + DG +++ + L ++D
Sbjct: 287 RSCLAAAENTSSVT-ASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVL--DIYD 343
Query: 187 LRADKEVA 194
+D++ +
Sbjct: 344 AASDQDQS 351
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 54.1 bits (128), Expect = 6e-09
Identities = 25/283 (8%), Positives = 73/283 (25%), Gaps = 28/283 (9%)
Query: 22 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWD---SLKCCRVNHLMGHENRVSCLQVSP 78
KD I + + S LL D ++ V+ K + + +++ + C
Sbjct: 11 KDYI----SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 79 DGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI 138
+ ++ + + A ++ L + + + +
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 139 NVWDSLKCCRVNHLMGHENRVS----CLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVA 194
+ + + N + + + G ++ ++ L D
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT 186
Query: 195 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD--------------SLKCCRVN-H 239
+ D + V + +C R+N
Sbjct: 187 IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246
Query: 240 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR--DEESKNRYMQY 280
V+ ++ SP + D + + +++ + +
Sbjct: 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289
Score = 45.6 bits (106), Expect = 3e-06
Identities = 30/286 (10%), Positives = 76/286 (26%), Gaps = 21/286 (7%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGA-TSVDFS-VSGRLLFAGYNDYTINVWDSLKCCRV 61
++ + + +F + ++ G I D +
Sbjct: 33 GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92
Query: 62 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVD 121
L +E + ++ G + L + V K +
Sbjct: 93 QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK 152
Query: 122 FSVS---GRLLFAGYNDYTINVWD----SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG 174
L G N+ + + + + + ++
Sbjct: 153 IFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212
Query: 175 SWDTTLRCRLFDLRADKEVA-----------CYKKDSILFGATSVDFSVSGRLLFAGYND 223
S D + FD + D + K ++ + S++FS + L+ +D
Sbjct: 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272
Query: 224 YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
I+ W+ ++ + N S ++++ + D T +
Sbjct: 273 GIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFK 317
Score = 44.1 bits (102), Expect = 1e-05
Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 18 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQV 76
A K+ + +S+D V+ +DY + + +C R+N V+ ++
Sbjct: 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF 259
Query: 77 SPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY 136
SP + D ++L+ K++ + K + + V + S +L +D
Sbjct: 260 SPRHKFLYTAGSDGI--ISCWNLQTRKKIKNFAKFN---EDSVVKIACSDNILCLATSDD 314
Query: 137 TINVWDSLKCCRVNHLMGHENRV 159
T ++ + + + +
Sbjct: 315 TFKTNAAIDQT----IELNASSI 333
Score = 44.1 bits (102), Expect = 1e-05
Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 106 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQV 164
A K+ + +S+D V+ +DY + + +C R+N V+ ++
Sbjct: 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF 259
Query: 165 SPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY 224
SP + D ++L+ K++ + K + + V + S +L +D
Sbjct: 260 SPRHKFLYTAGSDGI--ISCWNLQTRKKIKNFAKFN---EDSVVKIACSDNILCLATSDD 314
Query: 225 TINVWDSLKCCRVNHLMGHENRV 247
T ++ + + + +
Sbjct: 315 TFKTNAAIDQT----IELNASSI 333
Score = 42.9 bits (99), Expect = 3e-05
Identities = 21/213 (9%), Positives = 55/213 (25%), Gaps = 11/213 (5%)
Query: 66 GHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGA-TSVDFS- 123
++ +S +++ P + SWD +L ++ + + +F
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSL--TVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 124 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCR 183
+ ++ G I D + L +E + ++ G + L
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 184 LFDLRADKEVACYKKDSILFGA---TSVDFSVSGRLLFAGYNDYTINVWD----SLKCCR 236
+ V K + + L G N+ + +
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT 186
Query: 237 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ + + ++ S D +
Sbjct: 187 IEESGLKYQIRDVALLPKEQEGYACSSIDGRVA 219
Score = 28.7 bits (62), Expect = 0.93
Identities = 8/68 (11%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
++L+ K++ + K + + V + S +L +D T ++
Sbjct: 273 GIISCWNLQTRKKIKNFAKFN---EDSVVKIACSDNILCLATSDDTFKTNAAIDQT---- 325
Query: 64 LMGHENRV 71
+ + + +
Sbjct: 326 IELNASSI 333
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 49.9 bits (117), Expect = 1e-07
Identities = 27/245 (11%), Positives = 60/245 (24%), Gaps = 5/245 (2%)
Query: 29 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 88
A + + +G + N ++ H ++ + + SP G +SG
Sbjct: 20 AVVLGNTPAGDKIQYC-NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 89 DTTLRCRLFDLRADKEVACYK----KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 144
+R + + + + + +
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 145 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFG 204
+ + S + F ++ S+ +
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 205 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 264
F+ +G + + + H V L SPDGT +S S
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258
Query: 265 DTTLR 269
D T++
Sbjct: 259 DKTIK 263
Score = 47.2 bits (110), Expect = 1e-06
Identities = 27/271 (9%), Positives = 64/271 (23%), Gaps = 7/271 (2%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 63
+ + + Y + S T S SG +G + +WD+ + +
Sbjct: 38 TSVYTVPVGSLTDTEIYTEHS--HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK 95
Query: 64 LM--GHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVD 121
V + + ++ +F + +
Sbjct: 96 TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFK 155
Query: 122 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
S R++ ++ + + S S+G T +
Sbjct: 156 PSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 215
Query: 182 CRLFDLRADKEVACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNH 239
D ++ + + G + + D TI +W+
Sbjct: 216 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT 275
Query: 240 LMGHEN-RVSCLQVSPDGTAFSSGSWDTTLR 269
+ L + A S S + +
Sbjct: 276 IPVGTRIEDQQLGIIWTKQALVSISANGFIN 306
Score = 34.5 bits (77), Expect = 0.013
Identities = 13/100 (13%), Positives = 27/100 (27%), Gaps = 7/100 (7%)
Query: 69 NRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 128
L +P G + + + + + Y + S T S SG
Sbjct: 18 GTAVVLGNTPAGDKIQYCNGTSV---YTVPVGSLTDTEIYTEHS--HQTTVAKTSPSGYY 72
Query: 129 LFAGYNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSP 166
+G + +WD+ + + V +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 112
Score = 34.5 bits (77), Expect = 0.013
Identities = 13/100 (13%), Positives = 27/100 (27%), Gaps = 7/100 (7%)
Query: 157 NRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 216
L +P G + + + + + Y + S T S SG
Sbjct: 18 GTAVVLGNTPAGDKIQYCNGTSV---YTVPVGSLTDTEIYTEHS--HQTTVAKTSPSGYY 72
Query: 217 LFAGYNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSP 254
+G + +WD+ + + V +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 112
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 49.1 bits (115), Expect = 3e-07
Identities = 24/168 (14%), Positives = 46/168 (27%), Gaps = 3/168 (1%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
+ G +D I V+DS+ + L GH+ V L+ + G S + T
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRV 78
Query: 94 CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 153
+ + + + G D T++VW K V
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNI---KYIVTGSRDNTLHVWKLPKESSVPDHG 135
Query: 154 GHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSI 201
+ + F R + V+ +++
Sbjct: 136 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL 183
Score = 45.7 bits (106), Expect = 3e-06
Identities = 15/71 (21%), Positives = 25/71 (35%)
Query: 210 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ G +D I V+DS+ + L GH+ V L+ + G S + T
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRV 78
Query: 270 DEESKNRYMQY 280
+ K
Sbjct: 79 WDIKKGCCTHV 89
Score = 37.2 bits (84), Expect = 0.002
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
F VS +L +G ++ N+++ S K N ++ +++ + ++
Sbjct: 286 AITTFYVSDNILVSG-SENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFKGKTL-VAAVE 342
Query: 88 WDTTLRCRLFDL 99
D + D
Sbjct: 343 KDGQSFLEILDF 354
Score = 37.2 bits (84), Expect = 0.002
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 118 TSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 175
F VS +L +G ++ N+++ S K N ++ +++ + ++
Sbjct: 286 AITTFYVSDNILVSG-SENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFKGKTL-VAAVE 342
Query: 176 WDTTLRCRLFDL 187
D + D
Sbjct: 343 KDGQSFLEILDF 354
Score = 35.3 bits (79), Expect = 0.007
Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 16/239 (6%)
Query: 33 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 92
+ G V+ + + + + S VS G SGS+D TL
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL 183
Query: 93 RCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 152
+ Y S + + + D TI +WD + L
Sbjct: 184 IVW----DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 239
Query: 153 MGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSV 212
GH V L++S ++ + + F V
Sbjct: 240 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY-------SRKFSYHHTNLSAITTFYV 292
Query: 213 SGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
S +L +G ++ N+++ S K N ++ +++ + ++ D
Sbjct: 293 SDNILVSG-SENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFKGKTL-VAAVEKDGQSF 348
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 47.5 bits (111), Expect = 1e-06
Identities = 25/279 (8%), Positives = 55/279 (19%), Gaps = 39/279 (13%)
Query: 29 ATSVDFSVSGRLLFA----------GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP 78
+ + G + G + V+D + + + + P
Sbjct: 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP 108
Query: 79 DGTAFSS-------GSWDTTLRCRLFDLRADKEVACYKKDSILF-----GATSVDFSVSG 126
T+ + + + DL T G
Sbjct: 109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDG 168
Query: 127 R-LLFAGYNDYTINVWDS-----LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 180
A + T + + +NH + + + G
Sbjct: 169 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA 228
Query: 181 RCRL---FDLRADKEVACYKKDSILF-----GATSVDFSVSGRLLFAGYNDYTINVWDSL 232
+ A++ + V D
Sbjct: 229 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD-A 287
Query: 233 KCCRVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLR 269
K + + + VS D ++ + D TL
Sbjct: 288 KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLY 326
Score = 39.8 bits (91), Expect = 3e-04
Identities = 18/169 (10%), Positives = 34/169 (20%), Gaps = 33/169 (19%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
+S L I+ D S + + P G +
Sbjct: 198 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 257
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 147
+ V D K
Sbjct: 258 RALDRIYL--------------------------LVDQRDEWRHKTASRFVVVLD-AKTG 290
Query: 148 RVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLRCRLFDLRADKEVA 194
+ + + VS D ++ + D TL + D + +E+
Sbjct: 291 ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTL--YIHDAESGEELR 337
Score = 37.5 bits (85), Expect = 0.002
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 5/81 (6%)
Query: 28 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSS 85
+ V D K + + + VS D ++
Sbjct: 260 LDRIYLLVDQRDEWRHKTASRFVVVLD-AKTGERLAKFEMGHEIDSINVSQDEKPLLYAL 318
Query: 86 GSWDTTLRCRLFDLRADKEVA 106
+ D TL + D + +E+
Sbjct: 319 STGDKTL--YIHDAESGEELR 337
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 46.0 bits (107), Expect = 3e-06
Identities = 37/291 (12%), Positives = 78/291 (26%), Gaps = 52/291 (17%)
Query: 24 SILFGATSVDFSVSGRLLFAGYNDYTINVWD----------SLKCCRVNHLMGHENRVSC 73
+ + L+ + + + + ++
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 74 LQVSPDGTA-----FSSGSWDTTLRCRLFDLRADKEVACYKKDSILFG------------ 116
L+ + T F AD+ + S
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 117 --ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE------NRVSCLQVSPDG 168
ATSVD S G L+ G+N+ T+ + + + + N + ++ SP G
Sbjct: 185 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243
Query: 169 TAFSSGSWDTTLR-CRLFDLRADKEVACYKKDSILFGATSV-----------DFSVSGRL 216
+ + + L++ + + + A+ F+ SG
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 303
Query: 217 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSC----LQVSPDGTAFSSGS 263
L + D + WD R+ L H + + L V G + +
Sbjct: 304 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354
Score = 42.5 bits (98), Expect = 3e-05
Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 65/299 (21%)
Query: 33 DFSVSGRLLFAGYNDYTINVWD------SLKCCRVNHLMGHENRVSCLQV-------SPD 79
S + D + VWD + H++ + + V + +
Sbjct: 19 SVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 78
Query: 80 GTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILF--------GATSVDFSVSG----- 126
++ S+ L + + + E + + ++ + S
Sbjct: 79 LCLVATTSFSGDL--LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 136
Query: 127 RLLFAGYNDYTINVWD------------------SLKCCRVNHLMGHENRVSCLQVSPDG 168
L A T +W V M + + +S G
Sbjct: 137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 196
Query: 169 TAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGA--TSVDFSVSGRLLFAGYNDYTI 226
++G + T++ + I SV FS G LL ++ +
Sbjct: 197 L-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 227 NVW----------------DSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ H + V L + G S WD LR
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 314
Score = 42.1 bits (97), Expect = 5e-05
Identities = 23/251 (9%), Positives = 58/251 (23%), Gaps = 37/251 (14%)
Query: 61 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKK---------- 110
N H+ + + T S S D L +++D + K
Sbjct: 7 ANAGKAHDADIFSVSACNSFTV--SCSGDGYL--KVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 111 -DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT 169
+ + L+ + + + ++ + + +
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 170 AFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 229
+ S AT V + ++
Sbjct: 123 WALKWGAS-----------------NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 165
Query: 230 DSLKCCR----VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYMQYLLRSR 285
+ V M + + +S G ++G + T++ E Y S+
Sbjct: 166 NWSPTLELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQ 224
Query: 286 ITKPTQGLTVY 296
+ ++
Sbjct: 225 HSMINNSNSIR 235
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 44.5 bits (103), Expect = 8e-06
Identities = 28/257 (10%), Positives = 57/257 (22%), Gaps = 16/257 (6%)
Query: 29 ATSVDFSVSG-RLLFAGYNDYTINVWD--SLKCCRVNHLMGHE-NRVSCLQVSP--DGTA 82
T + + + + + + D K V GH + V+ ++ SP
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 83 FSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGA----TSVDFSVSGR--LLFAGYNDY 136
SG + + + S + + + GR + D
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 137 TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACY 196
+ + GH R++ + S D +
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 199
Query: 197 KKDSILFGATSVDFSVSGRLLFAGYNDYTI----NVWDSLKCCRVNHLMGHENRVSCLQV 252
V+FS + +
Sbjct: 200 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS 259
Query: 253 SPDGTAFSSGSWDTTLR 269
D F++ D T+R
Sbjct: 260 WLDSQKFATVGADATIR 276
Score = 42.6 bits (98), Expect = 3e-05
Identities = 26/208 (12%), Positives = 52/208 (25%), Gaps = 9/208 (4%)
Query: 30 TSVDFSVSGR--LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 87
+ + + GR + D + + GH R++ + S
Sbjct: 119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178
Query: 88 WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI----NVWDS 143
D + V+FS +
Sbjct: 179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 238
Query: 144 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILF 203
+ D F++ D T+ R++D+ K V + D
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATI--RVWDVTTSKCVQKWTLDKQQL 296
Query: 204 GATSVDFSVSG-RLLFAGYNDYTINVWD 230
G V +G + + D T+N ++
Sbjct: 297 GNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 33.4 bits (74), Expect = 0.026
Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 6/101 (5%)
Query: 205 ATSVDFSVSG-RLLFAGYNDYTINVWD--SLKCCRVNHLMGHE-NRVSCLQVSP--DGTA 258
T + + + + + + D K V GH + V+ ++ SP
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 259 FSSGSWDTTLRDEESKNRYMQYLLRSRITKPTQGLTVYFQD 299
SG + + + Q L D
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 43.2 bits (101), Expect = 2e-05
Identities = 25/147 (17%), Positives = 40/147 (27%), Gaps = 18/147 (12%)
Query: 135 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADK--E 192
I + D L V ++S G D + + DL +
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKV--NMIDLWMKEPTT 97
Query: 193 VACYKKDSILFG-ATSVDFSVSGRLLFA-GYNDYTINVWD--SLKCCRVNHLM------- 241
VA K S TS + A Y + D +L+ ++
Sbjct: 98 VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ 157
Query: 242 --GHENRVSCLQVSPDGTAFSSGSWDT 266
E RV+ + S F +T
Sbjct: 158 EYHPEPRVAAILASHYRPEFIVNVKET 184
Score = 37.1 bits (85), Expect = 0.002
Identities = 21/195 (10%), Positives = 45/195 (23%), Gaps = 28/195 (14%)
Query: 2 GKNHCRLFDLRADKEVACYKKDSILFGAT--SVDFSVSGRLLFAGYNDYTINVWD--SLK 57
L D + + G S SGR LF D +N+ D +
Sbjct: 40 DAGQIALIDGSTYEIKT-----VLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 94
Query: 58 CC---RVNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRCRLFDLRADKEVA-----CY 108
+ + + + A + W + + D +
Sbjct: 95 PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP--QYVIMDGETLEPKKIQSTRGM 152
Query: 109 KKDSILFGATSVDFSVSG-----RLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSC 161
D + ++ + I + D L + + E +
Sbjct: 153 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHD 211
Query: 162 LQVSPDGTAFSSGSW 176
+ F + +
Sbjct: 212 GGLDGSHRYFITAAN 226
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 42.6 bits (98), Expect = 3e-05
Identities = 34/276 (12%), Positives = 69/276 (25%), Gaps = 46/276 (16%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-------- 81
T++ + L +G D I W S H N + L S
Sbjct: 17 TALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYSSISWDD 67
Query: 82 --------------------AFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVD 121
A + G + K + ++V
Sbjct: 68 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 127
Query: 122 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
S + + + S + + S + +SP T ++G +
Sbjct: 128 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKIL 187
Query: 182 CRL-------FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 234
A + + + + L+ G D I ++ +
Sbjct: 188 LYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 247
Query: 235 CRVNH-LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
++ L H++ V+ L T S D ++
Sbjct: 248 MKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 282
Score = 37.2 bits (84), Expect = 0.001
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 19 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH-LMGHENRVSCLQVS 77
+ + + L+ G D I ++ + ++ L H++ V+ L
Sbjct: 208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 267
Query: 78 PDGTAFSSGSWDTTLR 93
T S D ++
Sbjct: 268 TPST-LVSSGADACIK 282
Score = 28.0 bits (60), Expect = 1.5
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
Query: 206 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 265
T++ + L +G D I W S H N + L S S D
Sbjct: 17 TALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYSSISWDD 67
Query: 266 TTLRDEESKNRYMQY 280
T + +K+ +
Sbjct: 68 TLKVNGITKHEFGSQ 82
Score = 27.2 bits (58), Expect = 2.3
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
+ GH ++ L V+P SGS+D +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIM 34
Score = 27.2 bits (58), Expect = 2.3
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 152 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
+ GH ++ L V+P SGS+D +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIM 34
Score = 27.2 bits (58), Expect = 2.3
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 240 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
+ GH ++ L V+P SGS+D +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIM 34
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 42.6 bits (98), Expect = 3e-05
Identities = 28/268 (10%), Positives = 77/268 (28%), Gaps = 12/268 (4%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLKCCRVN 62
++ + D+ ++K A S S G ++ A + +++ D+ +
Sbjct: 12 DNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68
Query: 63 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDF 122
+ + + + +TL +
Sbjct: 69 TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT-----SNTVAGTVKTGKSPLGLAL 123
Query: 123 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRC 182
S G+ L+ N + V + + + V+PDGT ++D+
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 183 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG 242
+ + + + A + + + + + ++ +
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYV--TNVDKYFNTVSMIDTGTNKITARIP 241
Query: 243 HENRVSCLQVSPDG-TAFSSGSWDTTLR 269
+ + V+PDG + + S+ T+
Sbjct: 242 VGPDPAGIAVTPDGKKVYVALSFCNTVS 269
Score = 31.0 bits (68), Expect = 0.18
Identities = 19/158 (12%), Positives = 50/158 (31%), Gaps = 5/158 (3%)
Query: 38 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLF 97
G+ L+ N + V + + + V+PDGT ++D+ +
Sbjct: 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVID 186
Query: 98 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN 157
+ + + A + + + + + ++ +
Sbjct: 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYV--TNVDKYFNTVSMIDTGTNKITARIPVGP 244
Query: 158 RVSCLQVSPDG-TAFSSGSWDTTLRCRLFDLRADKEVA 194
+ + V+PDG + + S+ T+ + D + A
Sbjct: 245 DPAGIAVTPDGKKVYVALSFCNTV--SVIDTATNTITA 280
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 40.7 bits (94), Expect = 2e-04
Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 40/305 (13%)
Query: 4 NHCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD-----SLKC 58
L D + K V + S SGR L D I++ D K
Sbjct: 42 GQIALVDGDSKKIVKVID---TGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 98
Query: 59 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGAT 118
+ + + S + +G++ E + T
Sbjct: 99 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWP--PQFAIMDGETLEPKQIVSTRGMTVDT 156
Query: 119 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 178
+++ + + + +V + + + + G WD+
Sbjct: 157 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDS 216
Query: 179 TLRCRLFDLRADKEVACYKKDSILFGAT------------------------SVDFSVSG 214
+ R + +VA A S G
Sbjct: 217 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG 276
Query: 215 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 274
+ G + + K L G ++ P + DTT +
Sbjct: 277 SISLIGTDPKNHPQYAW-KKVAE--LQGQGGGSLFIKTHPKSSHLYV---DTTFNPDARI 330
Query: 275 NRYMQ 279
++ +
Sbjct: 331 SQSVA 335
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 39.2 bits (89), Expect = 3e-04
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 3/102 (2%)
Query: 64 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFS 123
GH ++ L S DG S + + +D+ + T + +
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHI--NSWDISTGISNRVFPDVH-ATMITGIKTT 64
Query: 124 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVS 165
G L ++D+ V + + ++ L ++
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Score = 39.2 bits (89), Expect = 3e-04
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 3/102 (2%)
Query: 152 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFS 211
GH ++ L S DG S + + +D+ + T + +
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHI--NSWDISTGISNRVFPDVH-ATMITGIKTT 64
Query: 212 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVS 253
G L ++D+ V + + ++ L ++
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Score = 37.7 bits (85), Expect = 0.001
Identities = 34/241 (14%), Positives = 74/241 (30%), Gaps = 8/241 (3%)
Query: 30 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSW 88
T++ S G+ LF+ + IN WD H ++ ++ + G F+
Sbjct: 16 TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWD 75
Query: 89 DTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR 148
D ++ + + L + + I ++
Sbjct: 76 D---HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY----SHG 128
Query: 149 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSV 208
+ SC+ +S D + G D+ + + EV + +
Sbjct: 129 KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFS 188
Query: 209 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 268
+ +V ++ + N H +V+C+ SPD ++GS D ++
Sbjct: 189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 248
Query: 269 R 269
Sbjct: 249 I 249
Score = 35.7 bits (80), Expect = 0.004
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 240 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 269
GH ++ L S DG S + +
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHIN 37
Score = 33.0 bits (73), Expect = 0.035
Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 42 FAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 93
G D ++ VW+ + H + + T S D+ ++
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
Score = 33.0 bits (73), Expect = 0.035
Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 130 FAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 181
G D ++ VW+ + H + + T S D+ ++
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 37.6 bits (87), Expect = 0.001
Identities = 36/258 (13%), Positives = 63/258 (24%), Gaps = 52/258 (20%)
Query: 30 TSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 88
+ D +G+ + YN + ++ N G + G
Sbjct: 179 DNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF-NVERIAAAVKAGNFKTIGDS 237
Query: 89 DTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVS---GRLLFAGYNDYTINVWDSLK 145
+ D R + E Y I + S + G T++V K
Sbjct: 238 KVPV----VDGRGESEFTRY----IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289
Query: 146 CCRVNHLMGHENRVSC------LQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKD 199
+ L + P T F T L D +V
Sbjct: 290 LDDL--FEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTT------LFIDSQVC----- 336
Query: 200 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF 259
+ + + + +Y D V + GH + DG
Sbjct: 337 -------KWNIADAIKHYNGDRVNYIRQKLD------VQYQPGHNHASLTESRDADGKWL 383
Query: 260 SSGSWDTTLRDEESKNRY 277
S + SK+R+
Sbjct: 384 VVLS-------KFSKDRF 394
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 35.6 bits (80), Expect = 0.005
Identities = 15/125 (12%), Positives = 34/125 (27%), Gaps = 6/125 (4%)
Query: 43 AGYNDYTINVW--DSLKCCRVNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRCRLFDL 99
A I+VW + + ++ +V + VSPD + + + + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV--LAYRI 66
Query: 100 RADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV 159
D + +S L + S + F Y + + +
Sbjct: 67 APDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 125
Query: 160 SCLQV 164
Sbjct: 126 GLDGC 130
Score = 35.6 bits (80), Expect = 0.005
Identities = 15/125 (12%), Positives = 34/125 (27%), Gaps = 6/125 (4%)
Query: 131 AGYNDYTINVW--DSLKCCRVNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRCRLFDL 187
A I+VW + + ++ +V + VSPD + + + + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV--LAYRI 66
Query: 188 RADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV 247
D + +S L + S + F Y + + +
Sbjct: 67 APDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 125
Query: 248 SCLQV 252
Sbjct: 126 GLDGC 130
Score = 35.6 bits (80), Expect = 0.006
Identities = 23/286 (8%), Positives = 60/286 (20%), Gaps = 24/286 (8%)
Query: 7 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA-GYNDYTINVWD---SLKCCRVN 62
+++L + + + + + S R L+ ++ + +
Sbjct: 17 HVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA 76
Query: 63 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEVACYKKDSILFGATSVDF 122
++ + G GS++ + + ++
Sbjct: 77 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANIS 136
Query: 123 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS------- 175
+ L I ++ + E P F
Sbjct: 137 PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVN 195
Query: 176 --------WDTTLRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN 227
W+ + ++ + A L I
Sbjct: 196 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 255
Query: 228 VWDSLKCCRVNHLMGH---ENRVSCLQVSPDGT-AFSSGSWDTTLR 269
V+ + V G E + V G ++G +
Sbjct: 256 VFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS 301
Score = 30.6 bits (67), Expect = 0.21
Identities = 9/54 (16%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Query: 219 AGYNDYTINVW--DSLKCCRVNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLR 269
A I+VW + + ++ +V + VSPD + + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 62
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 30.4 bits (67), Expect = 0.24
Identities = 29/209 (13%), Positives = 53/209 (25%), Gaps = 12/209 (5%)
Query: 34 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF--SSGSWDTT 91
F G+L + I + + H+ + +++ DG F G + +T
Sbjct: 47 FDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKST 106
Query: 92 LRCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC----C 147
D + S + + F G F + Y+ N +
Sbjct: 107 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 166
Query: 148 RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRCRLFDLRADKEV------ACYKKDSI 201
R + V+ + T R L D +
Sbjct: 167 RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG 226
Query: 202 LFGATSVDFSVSGRLLFAGYNDYTINVWD 230
G S L A Y + V++
Sbjct: 227 HEGPDSCCIDSDDNLYVAMYGQGRVLVFN 255
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.136 0.434
Gapped
Lambda K H
0.267 0.0519 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,160,374
Number of extensions: 51123
Number of successful extensions: 403
Number of sequences better than 10.0: 1
Number of HSP's gapped: 233
Number of HSP's successfully gapped: 124
Length of query: 304
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 219
Effective length of database: 1,240,546
Effective search space: 271679574
Effective search space used: 271679574
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.7 bits)