Query psy4755
Match_columns 147
No_of_seqs 258 out of 1052
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 16:52:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1e_A Alpha-crystallin A chai 99.9 1.3E-25 4.4E-30 159.2 13.6 96 16-114 8-105 (106)
2 2klr_A Alpha-crystallin B chai 99.9 7.1E-25 2.4E-29 168.1 11.8 102 16-122 69-170 (175)
3 2wj5_A Heat shock protein beta 99.9 1.7E-24 5.9E-29 152.0 12.7 93 16-114 7-99 (101)
4 3q9p_A Heat shock protein beta 99.9 1.3E-24 4.3E-29 148.4 11.1 81 17-100 4-84 (85)
5 2y1y_A Alpha-crystallin B chai 99.9 2.7E-23 9.2E-28 143.0 12.5 83 18-103 4-86 (90)
6 4eld_A MJ16.5-P1, small heat s 99.9 2.9E-22 9.8E-27 150.9 9.0 91 17-114 63-161 (161)
7 3gla_A Low molecular weight he 99.9 3.1E-21 1E-25 134.3 12.3 83 16-102 10-99 (100)
8 3aab_A Putative uncharacterize 99.9 6.6E-22 2.2E-26 142.9 8.4 82 16-102 30-117 (123)
9 4fei_A Heat shock protein-rela 99.9 8.7E-21 3E-25 133.0 12.2 81 16-103 12-97 (102)
10 1gme_A Heat shock protein 16.9 99.8 4.9E-21 1.7E-25 143.2 9.5 94 16-114 49-150 (151)
11 2bol_A TSP36, small heat shock 99.8 1.3E-20 4.4E-25 155.9 10.8 103 18-128 106-212 (314)
12 2bol_A TSP36, small heat shock 99.8 1.4E-18 4.7E-23 143.8 8.4 80 18-100 231-313 (314)
13 2xcm_C SGT1-like protein, cyto 98.6 1.2E-07 4.2E-12 63.8 6.0 73 18-102 10-82 (92)
14 1rl1_A Suppressor of G2 allele 98.6 1.3E-07 4.6E-12 66.3 6.4 73 18-102 17-89 (114)
15 3igf_A ALL4481 protein; two-do 97.4 0.00028 9.5E-09 59.1 6.4 67 16-100 302-369 (374)
16 2k8q_A Protein SHQ1; beta-sand 97.2 0.00027 9.3E-09 51.6 4.3 70 18-103 11-84 (134)
17 3eud_A Protein SHQ1; CS domain 96.9 0.0089 3E-07 42.4 9.3 70 18-103 25-98 (115)
18 1x5m_A Calcyclin-binding prote 96.8 0.01 3.4E-07 42.2 8.9 76 18-102 28-104 (127)
19 1wgv_A KIAA1068 protein; CS do 96.6 0.047 1.6E-06 38.4 11.3 81 11-102 17-102 (124)
20 3qor_A Nuclear migration prote 96.2 0.019 6.6E-07 40.4 7.2 71 18-102 24-97 (121)
21 1wfi_A Nuclear distribution ge 96.0 0.032 1.1E-06 39.6 7.9 71 18-102 15-88 (131)
22 1ejf_A Progesterone receptor P 96.0 0.038 1.3E-06 39.0 8.0 72 18-102 11-82 (125)
23 2o30_A Nuclear movement protei 95.9 0.029 1E-06 39.9 7.2 69 18-101 12-80 (131)
24 1wh0_A Ubiquitin carboxyl-term 95.9 0.042 1.5E-06 39.6 8.1 78 18-102 27-112 (134)
25 2rh0_A NUDC domain-containing 95.6 0.058 2E-06 39.7 7.9 70 18-102 21-91 (157)
26 2cg9_X CO-chaperone protein SB 94.5 0.033 1.1E-06 39.9 3.9 74 21-102 24-98 (134)
27 2kmw_A Uncharacterized protein 93.4 0.15 5E-06 37.4 5.5 70 18-102 12-82 (150)
28 3q9p_A Heat shock protein beta 75.5 4 0.00014 26.4 4.2 34 67-102 8-41 (85)
29 2y1y_A Alpha-crystallin B chai 66.3 7.4 0.00025 25.2 3.9 32 68-101 8-39 (90)
30 3gla_A Low molecular weight he 65.7 14 0.00047 24.1 5.3 34 20-55 64-97 (100)
31 4fei_A Heat shock protein-rela 60.8 20 0.00069 23.5 5.4 35 20-56 61-95 (102)
32 3aab_A Putative uncharacterize 59.9 16 0.00053 24.9 4.9 34 67-102 35-69 (123)
33 3mhp_C TIC62_peptide, ferredox 58.9 3.9 0.00013 21.2 1.1 11 137-147 16-26 (26)
34 1q5l_A Chaperone protein DNAK; 57.1 17 0.00058 25.5 4.7 37 77-116 96-132 (135)
35 2wj5_A Heat shock protein beta 55.8 18 0.00061 23.9 4.5 32 22-55 56-88 (101)
36 1nkw_E 50S ribosomal protein L 55.4 20 0.00069 27.5 5.2 46 36-100 39-84 (212)
37 3l1e_A Alpha-crystallin A chai 54.3 22 0.00074 23.7 4.7 35 21-57 56-91 (106)
38 2cql_A OK/SW-CL.103, 60S ribos 53.0 12 0.00041 25.2 3.2 18 36-53 20-37 (100)
39 4eld_A MJ16.5-P1, small heat s 52.0 23 0.00078 25.3 4.8 35 20-56 117-151 (161)
40 2gjh_A Designed protein; oblig 51.9 9.7 0.00033 23.0 2.2 20 36-55 32-51 (62)
41 1vq8_E 50S ribosomal protein L 51.1 40 0.0014 25.1 6.1 47 36-100 9-55 (178)
42 1gme_A Heat shock protein 16.9 48.0 29 0.00097 24.6 4.8 35 20-56 104-138 (151)
43 2kgs_A Uncharacterized protein 47.9 14 0.00048 25.9 3.0 26 30-55 1-26 (132)
44 3dqg_A Heat shock 70 kDa prote 45.8 30 0.001 24.6 4.6 38 76-116 78-115 (151)
45 3h0x_A 78 kDa glucose-regulate 43.1 30 0.001 24.6 4.2 38 76-116 78-115 (152)
46 1qys_A TOP7; alpha-beta, novel 41.9 25 0.00085 23.2 3.3 20 36-55 76-95 (106)
47 2ks0_A Uncharacterized protein 41.8 15 0.00051 23.5 2.1 22 33-54 17-38 (71)
48 3bbo_I Ribosomal protein L6; l 40.7 14 0.00048 28.6 2.2 46 36-100 54-100 (223)
49 2klr_A Alpha-crystallin B chai 38.3 36 0.0012 25.0 4.1 32 22-55 118-150 (175)
50 3dob_A Heat shock 70 kDa prote 38.3 31 0.0011 24.6 3.6 39 75-116 77-115 (152)
51 2op6_A Heat shock 70 kDa prote 35.6 37 0.0013 23.8 3.7 37 77-116 79-115 (152)
52 3n8e_A Stress-70 protein, mito 34.7 42 0.0014 24.8 3.9 38 76-116 98-135 (182)
53 4e81_A Chaperone protein DNAK; 33.4 41 0.0014 25.5 3.8 38 76-116 79-116 (219)
54 3oeq_A Frataxin homolog, mitoc 30.8 40 0.0014 23.7 3.1 17 82-99 48-64 (123)
55 1rl6_A Protein (ribosomal prot 29.8 41 0.0014 24.9 3.2 17 36-52 11-27 (177)
56 1ew4_A CYAY protein; friedreic 29.5 28 0.00094 23.7 2.0 17 81-98 28-44 (106)
57 4a17_E RPL9, 60S ribosomal pro 29.0 43 0.0015 25.1 3.2 17 36-52 13-29 (188)
58 3v2d_H 50S ribosomal protein L 28.8 36 0.0012 25.2 2.7 18 36-53 12-29 (180)
59 3u5e_H L8, RP24, YL11, 60S rib 28.6 44 0.0015 25.1 3.2 18 36-53 13-30 (191)
60 3iz5_F 60S ribosomal protein L 28.4 44 0.0015 25.0 3.2 17 36-52 13-29 (190)
61 2o30_A Nuclear movement protei 28.4 54 0.0018 22.5 3.4 31 67-98 15-45 (131)
62 2zkr_e 60S ribosomal protein L 26.6 50 0.0017 24.8 3.2 17 36-52 13-29 (192)
63 2uwa_A Cellulase; glycoside hy 25.1 81 0.0028 24.6 4.3 42 34-77 30-74 (274)
64 3j21_F 50S ribosomal protein L 25.1 37 0.0013 25.4 2.2 18 36-53 14-31 (184)
65 1u00_A HSC66, chaperone protei 23.5 80 0.0027 23.7 3.9 33 81-116 81-113 (227)
66 2rh0_A NUDC domain-containing 20.0 1.1E+02 0.0038 21.8 3.8 31 67-98 24-54 (157)
No 1
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.3e-25 Score=159.19 Aligned_cols=96 Identities=32% Similarity=0.638 Sum_probs=85.7
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEE
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI 95 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I 95 (147)
.+++++|+|.++|| ||+++||+|+++++.|+|+|+++...++.+|++++|+|+|.||.+||.++|+|+|++||+|+|
T Consensus 8 ~e~~~~~~v~~dlP---G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 8 RSDRDKFVIFLDVK---HFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EECSSEEEEEEECT---TSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred EEcCCEEEEEEECC---CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence 45899999999887 999999999999999999999877666778999999999999999999999999944999999
Q ss_pred EEeCcCCCC--CCCCeEEeee
Q psy4755 96 TAPKRTLQD--KTTERPVPIV 114 (147)
Q Consensus 96 ~~PK~~~~~--~~~~r~I~I~ 114 (147)
++||..+.. ...+|+|+|+
T Consensus 85 ~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 85 SGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEccCcccccCCCCeEeeec
Confidence 999998742 1378999996
No 2
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=7.1e-25 Score=168.11 Aligned_cols=102 Identities=40% Similarity=0.699 Sum_probs=75.1
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEE
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI 95 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I 95 (147)
.++++.|+|.++|| ||++|||+|+++++.|+|+|++++..++.+|++++|+|+|.||.+||.++|+|+|++||||+|
T Consensus 69 ~e~~d~~~v~~dlP---G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 69 RLEKDRFSVNLDVK---HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp CCCCSEEEEEECCS---SCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred EEcCCeEEEEEECC---CCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 34889999999776 999999999999999999999877666678999999999999999999999999944999999
Q ss_pred EEeCcCCCCCCCCeEEeeeeCCCCCCC
Q psy4755 96 TAPKRTLQDKTTERPVPIVQTGVPALK 122 (147)
Q Consensus 96 ~~PK~~~~~~~~~r~I~I~~~~~~a~~ 122 (147)
++||.... ...|+|+|+.++.+|+.
T Consensus 146 ~lPK~~~~--~~~r~I~I~~~~~~~~~ 170 (175)
T 2klr_A 146 NGPRKQVS--GPERTIPITREEKPAVT 170 (175)
T ss_dssp EEECC----------------------
T ss_pred EEECCCCC--CCCeEEEEecCCccccc
Confidence 99998753 34699999988776553
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=1.7e-24 Score=152.04 Aligned_cols=93 Identities=40% Similarity=0.628 Sum_probs=80.2
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEE
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI 95 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I 95 (147)
.+++++|+|.++|| ||+++||+|+++++.|+|+|+++...++.+|++++|+|+|.||.+||.++|+|+|++||+|+|
T Consensus 7 ~e~~~~~~v~~dlP---G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 7 PTDPGYFSVLLDVK---HFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCSSCEEEEEECT---TSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEeCCEEEEEEECC---CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 45889999999887 999999999999999999999876655667999999999999999999999999944999999
Q ss_pred EEeCcCCCCCCCCeEEeee
Q psy4755 96 TAPKRTLQDKTTERPVPIV 114 (147)
Q Consensus 96 ~~PK~~~~~~~~~r~I~I~ 114 (147)
++||.... +++.++|.
T Consensus 84 ~lPK~~~~---~~~~~~i~ 99 (101)
T 2wj5_A 84 QATPASAQ---ASLPSPPA 99 (101)
T ss_dssp EECBCCCC---CSSCC---
T ss_pred EEECCCcC---CCCCCccc
Confidence 99998763 56666664
No 4
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.92 E-value=1.3e-24 Score=148.42 Aligned_cols=81 Identities=38% Similarity=0.674 Sum_probs=69.5
Q ss_pred ccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEE
Q psy4755 17 RKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT 96 (147)
Q Consensus 17 d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~ 96 (147)
+++++|.|.++|| ||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|.+||+|+|+
T Consensus 4 E~~~~~~v~~dlP---G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 4 HTADRWRVSLDVN---HFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp CCCCEEEEEEECT---TTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred CcCCEEEEEEECC---CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 5789999999877 9999999999999999999998766555678889999999999999999999999449999999
Q ss_pred EeCc
Q psy4755 97 APKR 100 (147)
Q Consensus 97 ~PK~ 100 (147)
+||.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9996
No 5
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.90 E-value=2.7e-23 Score=142.96 Aligned_cols=83 Identities=41% Similarity=0.740 Sum_probs=72.5
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 97 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 97 (147)
++++|+|.++|| ||+++||+|+++++.|+|+|+++...++.+|++++|+|+|.||.+||.++|+|+|+.||+|+|++
T Consensus 4 ~~~~~~v~~dlP---G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 4 EKDRFSVNLDVK---HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp --CCEEEEEECT---TSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred CCCEEEEEEECC---CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 578999999887 99999999999999999999987766667899999999999999999999999993399999999
Q ss_pred eCcCCC
Q psy4755 98 PKRTLQ 103 (147)
Q Consensus 98 PK~~~~ 103 (147)
||....
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998763
No 6
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.87 E-value=2.9e-22 Score=150.92 Aligned_cols=91 Identities=19% Similarity=0.340 Sum_probs=77.9
Q ss_pred ccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceee--CCcceEE------EEEEEEEECCCCcccCCcEEEcC
Q psy4755 17 RKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKE--DEHGFIS------RQFKRRYLLPKDVEIEKVTSSLS 88 (147)
Q Consensus 17 d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~--~~~~~~~------r~F~R~~~LP~~Vd~~~i~A~~~ 88 (147)
+++++|+|.++|| ||+++||+|+++++.|+|+|++.... ++.+|++ ++|+|+|.||.+||.++|+|+|
T Consensus 63 e~~~~~~v~~dlP---G~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~- 138 (161)
T 4eld_A 63 EGDQHIKVIAWLP---GVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF- 138 (161)
T ss_dssp ECSSEEEEEEECT---TCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-
T ss_pred EeCCEEEEEEECC---CCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-
Confidence 4899999999887 99999999999999999999887632 2334543 3799999999999999999999
Q ss_pred CCCEEEEEEeCcCCCCCCCCeEEeee
Q psy4755 89 SDGVLTITAPKRTLQDKTTERPVPIV 114 (147)
Q Consensus 89 ~dGvL~I~~PK~~~~~~~~~r~I~I~ 114 (147)
+||||+|++||.+.. ++|+|+|+
T Consensus 139 ~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 139 ENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp ETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred ECCEEEEEEEcCCCC---CCcEeecC
Confidence 599999999998763 57889885
No 7
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.86 E-value=3.1e-21 Score=134.28 Aligned_cols=83 Identities=24% Similarity=0.486 Sum_probs=70.7
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceee--CCcceEE-----EEEEEEEECCCCcccCCcEEEcC
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTSSLS 88 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~--~~~~~~~-----r~F~R~~~LP~~Vd~~~i~A~~~ 88 (147)
.+++++|+|.++|| ||+++||+|+++++.|+|+|++.... .+.+|++ ++|+|+|.||.+||.++|+|+|
T Consensus 10 ~e~~~~~~v~~~lP---G~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~- 85 (100)
T 3gla_A 10 KEEVNHFVLYADLP---GIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG- 85 (100)
T ss_dssp EECSSEEEEEEECT---TSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE-
T ss_pred EECCCEEEEEEECC---CCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE-
Confidence 34899999999987 99999999999999999999886543 2334554 3799999999999999999999
Q ss_pred CCCEEEEEEeCcCC
Q psy4755 89 SDGVLTITAPKRTL 102 (147)
Q Consensus 89 ~dGvL~I~~PK~~~ 102 (147)
+||+|+|++||.+.
T Consensus 86 ~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 86 RNGVLEIRIPKRPA 99 (100)
T ss_dssp ETTEEEEEEEBC--
T ss_pred eCCEEEEEEecCCC
Confidence 49999999999864
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.86 E-value=6.6e-22 Score=142.88 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=73.1
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEEC-CEEEEEEEEceeeCCcceEEE----EEEEEEECCCCcccCCc-EEEcCC
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVD-GFILVEGKHEEKEDEHGFISR----QFKRRYLLPKDVEIEKV-TSSLSS 89 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~r----~F~R~~~LP~~Vd~~~i-~A~~~~ 89 (147)
.+++++|+|.++|| ||+++||+|++++ +.|+|+|++.... +.+|+++ +|+|+|.||.+||.++| +|+| +
T Consensus 30 ~e~~~~~~v~~~lP---G~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~-~ 104 (123)
T 3aab_A 30 YEEGGYLVVVADLA---GFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY-E 104 (123)
T ss_dssp EEETTEEEEEEECC---SCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE-E
T ss_pred EEcCCEEEEEEECC---CCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE-c
Confidence 34899999999887 9999999999999 9999999887654 4567655 79999999999999999 9999 5
Q ss_pred CCEEEEEEeCcCC
Q psy4755 90 DGVLTITAPKRTL 102 (147)
Q Consensus 90 dGvL~I~~PK~~~ 102 (147)
||+|+|++||...
T Consensus 105 ~GvL~I~lPK~~~ 117 (123)
T 3aab_A 105 NGVLTIRIPIAGT 117 (123)
T ss_dssp TTEEEEEEEGGGE
T ss_pred CCEEEEEEEcCCC
Confidence 9999999999875
No 9
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.85 E-value=8.7e-21 Score=133.01 Aligned_cols=81 Identities=23% Similarity=0.318 Sum_probs=71.0
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcce-----EEEEEEEEEECCCCcccCCcEEEcCCC
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGF-----ISRQFKRRYLLPKDVEIEKVTSSLSSD 90 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~-----~~r~F~R~~~LP~~Vd~~~i~A~~~~d 90 (147)
.++++.|+|.++|| ||+++||+|+++++.|+|+|+++.. .+| .+++|+|+|.||.+||.++|+|+| +|
T Consensus 12 ~e~~~~~~v~~~lP---G~~~edi~v~~~~~~L~I~g~~~~~---~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~ 84 (102)
T 4fei_A 12 RDAGTHLDLLLDVP---GVDAGTLALAEDGGQLTVSGERPGT---EHLLRSERPSGRFVRELAFPEPVRPASGVASL-AG 84 (102)
T ss_dssp EEETTEEEEEEECT---TCCGGGCEEEEETTEEEEEEEECCC---SSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ET
T ss_pred EEcCCEEEEEEECC---CCchHhEEEEEECCEEEEEEEEecC---CCEEEEEEeccEEEEEEECCCCcchhHcEEEE-EC
Confidence 34899999999987 9999999999999999999988542 222 346899999999999999999999 59
Q ss_pred CEEEEEEeCcCCC
Q psy4755 91 GVLTITAPKRTLQ 103 (147)
Q Consensus 91 GvL~I~~PK~~~~ 103 (147)
|+|+|++||..+.
T Consensus 85 GvL~I~lpK~~~~ 97 (102)
T 4fei_A 85 GVLTVRFEKLRPT 97 (102)
T ss_dssp TEEEEEEEBSSCC
T ss_pred CEEEEEEEccCcc
Confidence 9999999998763
No 10
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.84 E-value=4.9e-21 Score=143.20 Aligned_cols=94 Identities=24% Similarity=0.501 Sum_probs=77.9
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEE-CCEEEEEEEEceee--CCcceEE-----EEEEEEEECCCCcccCCcEEEc
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTV-DGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTSSL 87 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~-~~~L~I~g~~~~~~--~~~~~~~-----r~F~R~~~LP~~Vd~~~i~A~~ 87 (147)
.+++++|+|.++|| ||+++||+|+++ ++.|+|+|++.... ++.+|++ ++|+|+|.||.+||.++|+|+|
T Consensus 49 ~e~~d~~~v~~dlP---Gv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~ 125 (151)
T 1gme_A 49 KETPEAHVFKADLP---GVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL 125 (151)
T ss_dssp EECSSEEEEEEECT---TCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEE
T ss_pred EEcCCEEEEEEECC---CCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEE
Confidence 34899999999987 999999999995 78999999876543 2334654 3699999999999999999999
Q ss_pred CCCCEEEEEEeCcCCCCCCCCeEEeee
Q psy4755 88 SSDGVLTITAPKRTLQDKTTERPVPIV 114 (147)
Q Consensus 88 ~~dGvL~I~~PK~~~~~~~~~r~I~I~ 114 (147)
+||+|+|++||....+ ...++|+|+
T Consensus 126 -~nGvL~I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 126 -ENGVLTVTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp -ETTEEEEEEECCCCCT-TCCCCCCCC
T ss_pred -ECCEEEEEEEccCcCC-CCCeEeeeC
Confidence 5999999999987642 345778775
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=1.3e-20 Score=155.92 Aligned_cols=103 Identities=18% Similarity=0.290 Sum_probs=87.3
Q ss_pred cCC----eEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEE
Q psy4755 18 KPR----ALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL 93 (147)
Q Consensus 18 ~e~----~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL 93 (147)
+++ +|+|.++|| ||+++||+|+++++.|+|+|+++... +.++.+++|+|+|.||.+||.++|+|+|..||||
T Consensus 106 ~~~dgk~~~~v~~dlP---G~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGVL 181 (314)
T 2bol_A 106 VGKDGRLHFKVYFNVK---NFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATITTDDVL 181 (314)
T ss_dssp ECTTSSEEEEEEEECT---TCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEECSSSEE
T ss_pred cCCCCceEEEEEEECC---CCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEEeCCCEE
Confidence 556 899999877 99999999999999999999887543 3456678999999999999999999999339999
Q ss_pred EEEEeCcCCCCCCCCeEEeeeeCCCCCCCCCCCCC
Q psy4755 94 TITAPKRTLQDKTTERPVPIVQTGVPALKPQAPSS 128 (147)
Q Consensus 94 ~I~~PK~~~~~~~~~r~I~I~~~~~~a~~~~~~~~ 128 (147)
+|++||..+. .+.|+|+..+..++++....+
T Consensus 182 ~I~lPK~~~~----~~~I~it~~~ql~Iqp~s~~q 212 (314)
T 2bol_A 182 VIEAPVNEPN----YKAIKLSPEKGLAIQPSEVQE 212 (314)
T ss_dssp EEEEEBSSCC----TTTEEEETTTEEEECCBCCSS
T ss_pred EEEEeccCcc----cceeecccCCccCcCCCcccc
Confidence 9999998753 466999998888888754443
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.75 E-value=1.4e-18 Score=143.78 Aligned_cols=80 Identities=16% Similarity=0.326 Sum_probs=63.6
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCc---ceEEEEEEEEEECCCCcccCCcEEEcCCCCEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEH---GFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT 94 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~---~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~ 94 (147)
+++.|+|.++| | |||+|+||+|++++|.|+|+|+++.+.+.. .+.+++|+|+|.||++||.++|+|+|. ||||+
T Consensus 231 ~~~~~~v~~~l-d-PG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~-dGvL~ 307 (314)
T 2bol_A 231 GSKKIHLELKV-D-PHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIV-DGLMV 307 (314)
T ss_dssp SCEEEEEEEEC-C-TTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEE-TTEEE
T ss_pred CCcEEEEEEEc-C-CCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEe-CCEEE
Confidence 45577777776 1 599999999999999999999987654321 234568999999999999999999995 99999
Q ss_pred EEEeCc
Q psy4755 95 ITAPKR 100 (147)
Q Consensus 95 I~~PK~ 100 (147)
|++||.
T Consensus 308 i~~Pk~ 313 (314)
T 2bol_A 308 VEAPLF 313 (314)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 999986
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.56 E-value=1.2e-07 Score=63.75 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=62.8
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 97 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 97 (147)
+.+.+.|++.++ |+.++|+.|.+.++.|.|++... ++ ..|...+.|+..||++..++.+. +|.|.|+|
T Consensus 10 t~~~V~v~i~~~---~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~~~s~~~~~-~~~l~i~L 77 (92)
T 2xcm_C 10 KPEEVVVTVFAK---GIPKQNVNIDFGEQILSVVIEVP---GE-----DAYYLQPRLFGKIIPDKCKYEVL-STKIEICL 77 (92)
T ss_dssp ETTEEEEEEECC---SCCGGGEEEEECSSBEEEEECCT---TS-----CCEEECCBBSSCBCGGGCEEEEC-SSCEEEEE
T ss_pred CCCEEEEEEEEC---CCChHHeEEEEECCEEEEEEEcC---CC-----cEEEEeeEcCCccCchhEEEEEE-CCEEEEEE
Confidence 788899999876 99999999999999999998542 11 24777889999999999999995 99999999
Q ss_pred eCcCC
Q psy4755 98 PKRTL 102 (147)
Q Consensus 98 PK~~~ 102 (147)
.|...
T Consensus 78 ~K~~~ 82 (92)
T 2xcm_C 78 AKADI 82 (92)
T ss_dssp EBSSS
T ss_pred EcCCC
Confidence 99864
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.55 E-value=1.3e-07 Score=66.31 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=63.3
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 97 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 97 (147)
+.+.+.|++.+| |+.++|++|.+.++.|.|++... ++ ..|...+.|+..||++..++.+. +|.|.|+|
T Consensus 17 t~~~V~v~i~l~---~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~e~s~~~~~-~~~l~i~L 84 (114)
T 1rl1_A 17 TESQVVITLMIK---NVQKNDVNVEFSEKELSALVKLP---SG-----EDYNLKLELLHPIIPEQSTFKVL-STKIEIKL 84 (114)
T ss_dssp CSSEEEEEECCC---SCCGGGEEEECSSSCEEEEEECT---TS-----SEEEEEECBSSCCCGGGEEEEEC-SSSEEEEE
T ss_pred CCCEEEEEEEeC---CCCHHHCEEEEEcCEEEEEEEeC---CC-----cEEEEEeeCCCcCCccccEEEEE-CCEEEEEE
Confidence 788999999876 99999999999999999998643 11 24778899999999999999995 99999999
Q ss_pred eCcCC
Q psy4755 98 PKRTL 102 (147)
Q Consensus 98 PK~~~ 102 (147)
.|...
T Consensus 85 ~K~~~ 89 (114)
T 1rl1_A 85 KKPEA 89 (114)
T ss_dssp ECSSC
T ss_pred EcCCC
Confidence 99864
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.38 E-value=0.00028 Score=59.12 Aligned_cols=67 Identities=15% Similarity=0.252 Sum_probs=55.7
Q ss_pred cccCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccC-CcEEEcCCCCEEE
Q psy4755 16 IRKPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIE-KVTSSLSSDGVLT 94 (147)
Q Consensus 16 ~d~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~-~i~A~~~~dGvL~ 94 (147)
+|+. .|.+++.|| ||++++|++.-.++.|+|++ ..|+|.+.||...--. -..|.| +||.|+
T Consensus 302 i~~~-~~~~~l~lP---~~~~~~~~l~~~gdeL~v~~-------------g~~rR~i~LP~~L~~~~v~~A~~-~~~~L~ 363 (374)
T 3igf_A 302 IDTH-NRQVRLFLP---GFDKKQVKLTQYGPEVTVEA-------------GDQRRNIFLPPALSGRPITGAKF-QNNYLI 363 (374)
T ss_dssp EETT-TTEEEEECT---TCCGGGCEEEEETTEEEEEE-------------TTEEEEEECCTTTTTCCEEEEEE-ETTEEE
T ss_pred EEec-cEEEEEECC---CCCHHHeEEEEECCeEEEEE-------------CCEeecccCCHHHcCCCccccEE-ECCEEE
Confidence 4555 788999887 99999999999999999998 2389999999876554 456999 599999
Q ss_pred EEEeCc
Q psy4755 95 ITAPKR 100 (147)
Q Consensus 95 I~~PK~ 100 (147)
|++-..
T Consensus 364 i~~~~~ 369 (374)
T 3igf_A 364 ISFLEH 369 (374)
T ss_dssp EEECCC
T ss_pred EEEehh
Confidence 997543
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.00027 Score=51.61 Aligned_cols=70 Identities=14% Similarity=0.240 Sum_probs=57.8
Q ss_pred cCCeEEEEEEcCCCCCCC--CCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCc-ccCCcEEEcC-CCCEE
Q psy4755 18 KPRALTLPFCIPSFLGAP--SHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-SDGVL 93 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~V-d~~~i~A~~~-~dGvL 93 (147)
.++.++|.+.+| ..+ ..++++.+++..+..... -| .-++.||..| |.+.-+|+|+ +.|.|
T Consensus 11 d~e~viV~Ik~P---~~~~~~sdiei~v~~~~F~F~~~--------PY-----yLRL~LP~~V~e~~~~kA~YD~d~~~~ 74 (134)
T 2k8q_A 11 DEEFIFLKIFIS---NIRFSAVGLEIIIQENMIIFHLS--------PY-----YLRLRFPHELIDDERSTAQYDSKDECI 74 (134)
T ss_dssp CSSEEEEEEECC---SSCCCSSSCCCEECSSSEEECSS--------SS-----CEEECCSSCEECCSSCEEEEETTTTEE
T ss_pred CCCEEEEEEEcC---ccccCccccEEEEeCCEEEEecC--------Ce-----EEEecCCCeeecCCCcceeEeccCCEE
Confidence 678899999987 666 899999999988887662 12 2339999998 9999999998 59999
Q ss_pred EEEEeCcCCC
Q psy4755 94 TITAPKRTLQ 103 (147)
Q Consensus 94 ~I~~PK~~~~ 103 (147)
+|++||..+.
T Consensus 75 ~VtLpK~~~G 84 (134)
T 2k8q_A 75 NVKVAKLNKN 84 (134)
T ss_dssp EEEEEESSTT
T ss_pred EEEEeCCCCC
Confidence 9999998764
No 17
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.0089 Score=42.45 Aligned_cols=70 Identities=14% Similarity=0.240 Sum_probs=55.5
Q ss_pred cCCeEEEEEEcCCCCCCC--CCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCc-ccCCcEEEcC-CCCEE
Q psy4755 18 KPRALTLPFCIPSFLGAP--SHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-SDGVL 93 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~V-d~~~i~A~~~-~dGvL 93 (147)
.++.+.|.+-+| -.+ ..++.+.++++.+....+ - |.-++.||..| |.+.-+|+|+ .+|.+
T Consensus 25 Ddefv~I~I~~p---~ir~~a~~~ei~vd~~~F~F~~~--------P-----YyLRL~lP~~vved~~~~A~YD~d~g~~ 88 (115)
T 3eud_A 25 DEEFIFLKIFIS---NIRFSAVGLEIIIQENMIIFHLS--------P-----YYLRLRFPHELIDDERSTAQYDSKDECI 88 (115)
T ss_dssp CSSEEEEEEECC---SCCCCSSSCEEEEETTEEEEEET--------T-----EEEEEECSSCEECSTTCEEEEETTTTEE
T ss_pred CCCEEEEEEEcC---ceecccCccEEEEeCCEEEEecC--------C-----eEEEEecCcceecCCCcceEEeCCCcEE
Confidence 677888888876 655 789999999998887762 1 33349999987 7788889997 69999
Q ss_pred EEEEeCcCCC
Q psy4755 94 TITAPKRTLQ 103 (147)
Q Consensus 94 ~I~~PK~~~~ 103 (147)
+|++||..+.
T Consensus 89 ~v~lpK~~~G 98 (115)
T 3eud_A 89 NVKVAKLNKN 98 (115)
T ss_dssp EEEEEESSTT
T ss_pred EEEEcCCcCC
Confidence 9999998764
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.78 E-value=0.01 Score=42.15 Aligned_cols=76 Identities=9% Similarity=0.142 Sum_probs=60.2
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEE-CCCCcccCCcEEEcCCCCEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL-LPKDVEIEKVTSSLSSDGVLTIT 96 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~-LP~~Vd~~~i~A~~~~dGvL~I~ 96 (147)
+.+.+.|+|.++++..+.++++.|.+..+.|.|..... ++. .|.-.+. |-..||++.-+..+. .+.+.|.
T Consensus 28 t~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~---~~~-----~y~~~~~~L~~~I~~e~S~~~v~-~~kVei~ 98 (127)
T 1x5m_A 28 SDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL---NGK-----SYSMIVNNLLKPISVEGSSKKVK-TDTVLIL 98 (127)
T ss_dssp ETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC---SSS-----CEEEEEECBSSCCCTTTCEEEEE-TTEEEEE
T ss_pred CCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC---CCC-----cEEEEhHHhcCccCcccCEEEEe-CCEEEEE
Confidence 78999999998843333899999999999999988421 111 2445574 889999999899995 8999999
Q ss_pred EeCcCC
Q psy4755 97 APKRTL 102 (147)
Q Consensus 97 ~PK~~~ 102 (147)
|-|...
T Consensus 99 L~K~~~ 104 (127)
T 1x5m_A 99 CRKKVE 104 (127)
T ss_dssp EECSSS
T ss_pred EEECCC
Confidence 999864
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.59 E-value=0.047 Score=38.43 Aligned_cols=81 Identities=15% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCCCccc---cCCeEEEEEEcCCCCCC-CCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEE
Q psy4755 11 RNPPKIR---KPRALTLPFCIPSFLGA-PSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSS 86 (147)
Q Consensus 11 ~~~p~~d---~e~~~~l~~~lpDvpG~-~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~ 86 (147)
...|.+. +.+.+.|+|.|| +|+ +.+||.|.+..+.|.|..+.. .+.. +.-...|...|+++.-.-.
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp--~~~~~~kdv~V~i~~~~l~v~~~~~---~~~~-----~~~~~~L~~~I~~e~S~w~ 86 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVP--KHVVKGKQVSVALSSSSIRVAMLEE---NGER-----VLMEGKLTHKINTESSLWS 86 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECC--TTCCSGGGEEEEECSSEEEEEEECS---SSEE-----EEEEEEBSSCBCTTTCEEE
T ss_pred CcCCcEEEEEcccEEEEEEEcC--CCCCchhheEEEEEcCEEEEEEEcc---CCCc-----eEEcccccCcCCCcCCEEE
Confidence 3445444 788999999876 377 899999999999999987531 1111 1233678899999999999
Q ss_pred cCCCCE-EEEEEeCcCC
Q psy4755 87 LSSDGV-LTITAPKRTL 102 (147)
Q Consensus 87 ~~~dGv-L~I~~PK~~~ 102 (147)
+. +|. |.|.|-|...
T Consensus 87 i~-~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 87 LE-PGKCVLVNLSKVGE 102 (124)
T ss_dssp EC-TTSEEEEEECBSSS
T ss_pred Ee-CCCEEEEEEEECCC
Confidence 94 775 9999999853
No 20
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.17 E-value=0.019 Score=40.45 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=55.9
Q ss_pred cCCeEEEEEEcCCCCC--CCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCC-EEE
Q psy4755 18 KPRALTLPFCIPSFLG--APSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLT 94 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dG-vL~ 94 (147)
+.+.+.|+|.|| .| ++..||.|.+..+.|.|..+- ..-++ ...|...|+++.-.-.+ ++| .|.
T Consensus 24 t~~eV~v~V~lp--~~~~~~~kdv~V~i~~~~l~v~~kg-----~~~~~------~g~L~~~I~~deS~w~i-~~~~~i~ 89 (121)
T 3qor_A 24 TLSELDLAVPFC--VNFRLKGKDMVVDIQRRHLRVGLKG-----QPAII------DGELYNEVKVEESSWLI-ADGAVVT 89 (121)
T ss_dssp CSSEEEEEEECC--CSSCCCGGGEEEEEETTEEEEEETT-----SCCSE------EEEBSSCBCGGGCEEEE-ETTTEEE
T ss_pred ccceEEEEEECC--CCCcccccceEEEEEcCEEEEEEcC-----cceEE------eccccccccccccEEEE-cCCCEEE
Confidence 788899999887 34 789999999999999987631 11122 34688899999989999 488 999
Q ss_pred EEEeCcCC
Q psy4755 95 ITAPKRTL 102 (147)
Q Consensus 95 I~~PK~~~ 102 (147)
|.|-|...
T Consensus 90 i~L~K~~~ 97 (121)
T 3qor_A 90 VHLEKINK 97 (121)
T ss_dssp EEEEBSSS
T ss_pred EEEEECCC
Confidence 99999754
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.04 E-value=0.032 Score=39.60 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=55.2
Q ss_pred cCCeEEEEEEcCCCCC--CCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCC-EEE
Q psy4755 18 KPRALTLPFCIPSFLG--APSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLT 94 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dG-vL~ 94 (147)
+.+.+.|+|.||+ | ++++|+.|.+..+.|.|..+. ..-++ ...|...|+++.-.-.+ ++| .|.
T Consensus 15 t~~~V~i~I~lp~--~~~~~~kdv~V~i~~~~l~v~~kg-----~~~~~------~~~L~~~I~~e~s~w~i-~~~k~v~ 80 (131)
T 1wfi_A 15 TLAELDLAVPFRV--SFRLKGKDVVVDIQRRHLRVGLKG-----QPPVV------DGELYNEVKVEESSWLI-EDGKVVT 80 (131)
T ss_dssp CSSEEEEEECCCC--SSCCCTTSEEEEEETTEEEEEETT-----SCCSB------CSCBSSCBCSTTCEEEE-ETTTEEE
T ss_pred cCCEEEEEEECCC--CCcccccceEEEEeCCEEEEEECC-----ceEEE------ecccccccccccCEEEE-cCCCEEE
Confidence 6788888887662 5 889999999999999998731 11111 24577899999999999 488 899
Q ss_pred EEEeCcCC
Q psy4755 95 ITAPKRTL 102 (147)
Q Consensus 95 I~~PK~~~ 102 (147)
|.|-|...
T Consensus 81 i~L~K~~~ 88 (131)
T 1wfi_A 81 VHLEKINK 88 (131)
T ss_dssp EEEEBSSS
T ss_pred EEEEECCC
Confidence 99999864
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=95.96 E-value=0.038 Score=38.99 Aligned_cols=72 Identities=7% Similarity=0.099 Sum_probs=57.7
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 97 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 97 (147)
+.+.+.|+|.++ +. ++++|.+..+.|.+++.... ++ ..|.-.+.|-..|+++.-+..+. ++.+.|+|
T Consensus 11 t~~~V~ltI~~~---~~--~~~~V~~~~~~l~~~~~~~~---~~----~~y~~~l~L~~~I~~e~S~~~v~-~~kiei~L 77 (125)
T 1ejf_A 11 RRDYVFIEFCVE---DS--KDVNVNFEKSKLTFSCLGGS---DN----FKHLNEIDLFHCIDPNDSKHKRT-DRSILCCL 77 (125)
T ss_dssp CSSEEEEEECCT---TE--EEEEEEEETTEEEEEEEETT---TT----EEEEEEEEBSSCEEEEEEEEEEC-SSCEEEEE
T ss_pred CCCEEEEEEEec---CC--CceEEEEECCEEEEEEEeCC---CC----ceEEEEEEccceeccccCEEEEC-CCEEEEEE
Confidence 678888888876 53 79999999999999986311 11 23666788999999999999995 88999999
Q ss_pred eCcCC
Q psy4755 98 PKRTL 102 (147)
Q Consensus 98 PK~~~ 102 (147)
.|..+
T Consensus 78 ~K~~~ 82 (125)
T 1ejf_A 78 RKGES 82 (125)
T ss_dssp EESST
T ss_pred EECCC
Confidence 99864
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=95.90 E-value=0.029 Score=39.92 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=53.7
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 97 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~ 97 (147)
+.+.+.|+|.|| +|++++|+.|.+..+.|.|..+ +..+ | ...|...|+++.-.-.+ .+|.|.|.|
T Consensus 12 t~~~V~i~I~lp--~~~~~kdv~V~i~~~~l~v~~~------g~~~----~--~~~L~~~I~~e~S~w~i-~~~kv~i~L 76 (131)
T 2o30_A 12 ELNEINIQFPVT--GDADSSAIKIRMVGKKICVKNQ------GEIV----I--DGELLHEVDVSSLWWVI-NGDVVDVNV 76 (131)
T ss_dssp ETTEEEEEEECC-----CCSCEEEEEETTEEEEEET------TEEE----E--EEEBSSCEEEEEEEEEE-ETTEEEEEE
T ss_pred cCCEEEEEEECC--CCCCccceEEEEECCEEEEEEC------CEee----E--ccccccccccccCEEEE-eCCEEEEEE
Confidence 678888999875 4899999999999999999873 1112 2 35788899999988899 488899999
Q ss_pred eCcC
Q psy4755 98 PKRT 101 (147)
Q Consensus 98 PK~~ 101 (147)
-|..
T Consensus 77 ~K~~ 80 (131)
T 2o30_A 77 TKKR 80 (131)
T ss_dssp EESS
T ss_pred EECC
Confidence 9984
No 24
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=95.90 E-value=0.042 Score=39.60 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=60.1
Q ss_pred c-CCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceee------CCc-ceEEEEEEEEEECCCCcccCCcEEEcCC
Q psy4755 18 K-PRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKE------DEH-GFISRQFKRRYLLPKDVEIEKVTSSLSS 89 (147)
Q Consensus 18 ~-e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~------~~~-~~~~r~F~R~~~LP~~Vd~~~i~A~~~~ 89 (147)
+ .+.+.|+|.++ ++.+++++|.+..+.|.|........ ..+ . ..|.-.+.|-..|+++.-+..+.
T Consensus 27 t~~~~V~vtI~~k---~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~---~~y~~~~~L~~~I~pe~S~~~v~- 99 (134)
T 1wh0_A 27 KGPDSVVVHVYVK---EICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPH---TTFRWQVKLRNLIEPEQCTFCFT- 99 (134)
T ss_dssp ETTTEEEEEEECC---SBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTT---SCEEEEEEBSSCEEEEEEEEEEC-
T ss_pred CCCCEEEEEEEeC---CCCcccCEEEEECCEEEEEEEcCCCcccccccccCcc---eeEEEeccccccCCchhCEEEEe-
Confidence 6 88999999876 89999999999999999987432110 000 0 12555578999999999999995
Q ss_pred CCEEEEEEeCcCC
Q psy4755 90 DGVLTITAPKRTL 102 (147)
Q Consensus 90 dGvL~I~~PK~~~ 102 (147)
++.+.|.|.|...
T Consensus 100 ~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 100 ASRIDICLRKRQS 112 (134)
T ss_dssp SSEEEEEEEESSS
T ss_pred CCEEEEEEEECCC
Confidence 8999999999864
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.56 E-value=0.058 Score=39.74 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=56.4
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCE-EEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-LTIT 96 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGv-L~I~ 96 (147)
+.+.+.|+|.|| +|++..||.|.+..+.|.|..+ +..+ -...|...|+++.-.-.+. +|. |.|.
T Consensus 21 t~~eV~v~I~lp--~~~~~kdv~V~i~~~~L~v~~k------g~~~------l~g~L~~~I~~eeS~w~i~-~~k~v~I~ 85 (157)
T 2rh0_A 21 TLEEVFIEVQVP--PGTRAQDIQCGLQSRHVALAVG------GREI------LKGKLFDSTIADEGTWTLE-DRKMVRIV 85 (157)
T ss_dssp CSSEEEEEEECC--TTCCGGGEEEEECSSEEEEEET------TEEE------EEEEBSSCBCGGGCEEEEE-CCCEEEEE
T ss_pred cCCEEEEEEECC--CCCcccceEEEEecCEEEEEEC------CEEE------EeeccccccCccccEEEEc-CCcEEEEE
Confidence 788899999876 3789999999999999999873 1112 2357889999999999994 775 9999
Q ss_pred EeCcCC
Q psy4755 97 APKRTL 102 (147)
Q Consensus 97 ~PK~~~ 102 (147)
|-|...
T Consensus 86 L~K~~~ 91 (157)
T 2rh0_A 86 LTKTKR 91 (157)
T ss_dssp EEBSSC
T ss_pred EEEcCC
Confidence 999864
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.53 E-value=0.033 Score=39.94 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=53.1
Q ss_pred eEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCE-EEEEEeC
Q psy4755 21 ALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-LTITAPK 99 (147)
Q Consensus 21 ~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGv-L~I~~PK 99 (147)
.+.|+|.++ +. .+++|.+..+.|.+++....... +--...|.-.+.|-..||++.-+..+. ++. |.|+|.|
T Consensus 24 ~V~ltI~~~---~~--~~~~V~~~~~~l~~~~~~~~~~g--~~~~~~y~~~l~L~~~Idpe~S~~~v~-~~~~vei~L~K 95 (134)
T 2cg9_X 24 YVLITVSIA---DC--DAPELTIKPSYIELKAQSKPHVG--DENVHHYQLHIDLYKEIIPEKTMHKVA-NGQHYFLKLYK 95 (134)
T ss_dssp EEEEECCCS---SE--ESCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEEEC-CC--CEEEEEE
T ss_pred EEEEEEEec---CC--CceEEEEECCEEEEEEecccccC--CccCceEEEEEEChhhccccccEEEEC-CCEEEEEEEEE
Confidence 377777766 65 48999999999999986432100 000134666789999999999999995 888 9999999
Q ss_pred cCC
Q psy4755 100 RTL 102 (147)
Q Consensus 100 ~~~ 102 (147)
..+
T Consensus 96 ~~~ 98 (134)
T 2cg9_X 96 KDL 98 (134)
T ss_dssp CSS
T ss_pred CCC
Confidence 873
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=93.37 E-value=0.15 Score=37.36 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=55.1
Q ss_pred cCCeEEEEEEcCCCCCCCCCCeEEEEE-CCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEE
Q psy4755 18 KPRALTLPFCIPSFLGAPSHEISIKTV-DGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT 96 (147)
Q Consensus 18 ~e~~~~l~~~lpDvpG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~ 96 (147)
+.+.+.|+|.++ ++ ++++|.+. .+.|.+++. . . . + ..|.-.+.|=..|+++ -+.++. ...+.|+
T Consensus 12 t~~~V~ltI~l~---~~--~~v~V~~~~~~~l~~~~~-~--~-~-~---~~y~~~l~L~~~Idpe-S~~~v~-~~kIei~ 76 (150)
T 2kmw_A 12 RSDKVYLTVALP---DA--KDISVKCEPQGLFSFSAL-G--A-Q-G---ERFEFSLELYGKIMTE-YRKNVG-LRNIIFS 76 (150)
T ss_dssp CSSEEEEEECCS---SE--EEEEECCCTTEEEEEEEE-T--T-T-T---EEEEEEEEBSSCEEEE-EEEEEE-SSSEEEE
T ss_pred CCCEEEEEEEeC---CC--CceEEEEecCCEEEEEEE-c--C-C-C---ceEEEEeEhhhccccc-ceEEec-CCEEEEE
Confidence 678888999876 65 58999999 789999996 1 1 1 1 3466678898999999 888885 7889999
Q ss_pred EeCcCC
Q psy4755 97 APKRTL 102 (147)
Q Consensus 97 ~PK~~~ 102 (147)
|.|..+
T Consensus 77 L~K~e~ 82 (150)
T 2kmw_A 77 IQKEER 82 (150)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 999864
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=75.54 E-value=4 Score=26.36 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=28.0
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCC
Q psy4755 67 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 102 (147)
Q Consensus 67 ~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~PK~~~ 102 (147)
.|.=.+.|| +++.++|+-.+. +|.|+|+.-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~-~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTK-DGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEE-TTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEEE-CCEEEEEEEEccc
Confidence 466779998 799999999995 9999999987643
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=66.34 E-value=7.4 Score=25.21 Aligned_cols=32 Identities=9% Similarity=0.170 Sum_probs=27.6
Q ss_pred EEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy4755 68 FKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRT 101 (147)
Q Consensus 68 F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~PK~~ 101 (147)
|.=.+.|| +++.++|.-.+. +|.|+|..-+..
T Consensus 8 ~~v~~dlP-G~~~edi~V~v~-~~~L~I~g~~~~ 39 (90)
T 2y1y_A 8 FSVNLDVK-HFSPEELKVKVL-GDVIEVHGKHEE 39 (90)
T ss_dssp EEEEEECT-TSCGGGEEEEEE-TTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEE-CCEEEEEEEEec
Confidence 56679998 899999999995 999999997654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=65.69 E-value=14 Score=24.07 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=28.3
Q ss_pred CeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEc
Q psy4755 20 RALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHE 55 (147)
Q Consensus 20 ~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~ 55 (147)
+.|.-.+.|| .+++.+.|+-++.+|.|+|.--+.
T Consensus 64 g~f~r~~~LP--~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 64 GSFHRRFALP--DSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEEECC--TTBCTTSCEEEEETTEEEEEEEBC
T ss_pred eEEEEEEECC--CCcChHHeEEEEeCCEEEEEEecC
Confidence 3677788888 369999999999999999988543
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=60.81 E-value=20 Score=23.53 Aligned_cols=35 Identities=9% Similarity=0.053 Sum_probs=29.0
Q ss_pred CeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEce
Q psy4755 20 RALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEE 56 (147)
Q Consensus 20 ~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~ 56 (147)
..|.-.+.||+ +++.+.|+-++++|.|+|.-.+.+
T Consensus 61 g~f~R~~~LP~--~vd~~~i~A~~~~GvL~I~lpK~~ 95 (102)
T 4fei_A 61 GRFVRELAFPE--PVRPASGVASLAGGVLTVRFEKLR 95 (102)
T ss_dssp EEEEEEEECSS--CBCTTCCEEEEETTEEEEEEEBSS
T ss_pred cEEEEEEECCC--CcchhHcEEEEECCEEEEEEEccC
Confidence 36777888883 799999999999999999996544
No 32
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=59.91 E-value=16 Score=24.92 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=28.7
Q ss_pred EEEEEEECCCCcccCCcEEEcCCC-CEEEEEEeCcCC
Q psy4755 67 QFKRRYLLPKDVEIEKVTSSLSSD-GVLTITAPKRTL 102 (147)
Q Consensus 67 ~F~R~~~LP~~Vd~~~i~A~~~~d-GvL~I~~PK~~~ 102 (147)
.|.=.+.|| +++.++|+-.+. + |.|+|+.-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~-~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVS-GQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEE-TTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEe-CCCEEEEEEEEecc
Confidence 366668998 799999999995 8 999999997654
No 33
>3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum}
Probab=58.88 E-value=3.9 Score=21.20 Aligned_cols=11 Identities=36% Similarity=0.706 Sum_probs=8.3
Q ss_pred cccCCCCCCCC
Q psy4755 137 PIITSPTPSAP 147 (147)
Q Consensus 137 ~~~~~~~~~~~ 147 (147)
--|+||+|++|
T Consensus 16 KPPsSPsPs~P 26 (26)
T 3mhp_C 16 KPPSSPSPTKP 26 (26)
T ss_dssp SCSSCSSCCCC
T ss_pred CCCCCCCCCCC
Confidence 35788888876
No 34
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=57.06 E-value=17 Score=25.46 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=24.8
Q ss_pred CcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 77 DVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 77 ~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
+...=.|+-.++.||+|.|++--... .+...|.|+..
T Consensus 96 G~~~IeVtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 132 (135)
T 1q5l_A 96 GMPQIEVTFDIDADGILHVSAKDKNS---GKEQKITIKAS 132 (135)
T ss_dssp SSCCEEEEEEECTTSEEEEEEEETTT---CCEEEEEEECS
T ss_pred ceeEEEEEEEECCCCEEEEEEEECCC---CCEEEEEEecC
Confidence 34334467777899999999964433 35677877643
No 35
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=55.80 E-value=18 Score=23.89 Aligned_cols=32 Identities=9% Similarity=0.303 Sum_probs=27.3
Q ss_pred EEEEEEcCCCCCCCCCCeEEEE-ECCEEEEEEEEc
Q psy4755 22 LTLPFCIPSFLGAPSHEISIKT-VDGFILVEGKHE 55 (147)
Q Consensus 22 ~~l~~~lpDvpG~~~edI~V~v-~~~~L~I~g~~~ 55 (147)
|.-.+.|| .+++.+.|+-++ .+|.|+|+..+.
T Consensus 56 F~R~~~LP--~~vd~~~i~A~~s~nGvL~I~lPK~ 88 (101)
T 2wj5_A 56 FHRRYRLP--PGVDPAAVTSALSPEGVLSIQATPA 88 (101)
T ss_dssp EEEEEECC--TTBCTTCCEEEECTTSEEEEEECBC
T ss_pred EEEEEECC--CCcChhHCEEEECCCCEEEEEEECC
Confidence 66788887 489999999999 799999999543
No 36
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=55.42 E-value=20 Score=27.54 Aligned_cols=46 Identities=17% Similarity=0.334 Sum_probs=29.7
Q ss_pred CCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCc
Q psy4755 36 SHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 100 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~PK~ 100 (147)
|+.++|+++++.|+|+|..- - .++.| +.. |...+ +||.|.|+.+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG-------~----L~~~~--~~~-----v~i~~-e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG-------E----LTVPY--NTE-----LTVRQ-DGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE-------E----EEEEC--CCC-----eEEEE-ECCEEEEEcCCC
Confidence 58899999999999999432 2 22222 333 33455 488887775543
No 37
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=54.33 E-value=22 Score=23.71 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=28.6
Q ss_pred eEEEEEEcCCCCCCCCCCeEEEE-ECCEEEEEEEEcee
Q psy4755 21 ALTLPFCIPSFLGAPSHEISIKT-VDGFILVEGKHEEK 57 (147)
Q Consensus 21 ~~~l~~~lpDvpG~~~edI~V~v-~~~~L~I~g~~~~~ 57 (147)
.|.=.+.|| .+++.+.|+-++ .+|.|+|+.-+...
T Consensus 56 eF~R~~~LP--~~vd~~~i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 56 EFHRRYRLP--SNVDQSALSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp EEEEEEECC--TTBCTTSCEEEECTTSEEEEEEEBCCC
T ss_pred EEEEEEECC--CCcChhHcEEEECCCCEEEEEEEccCc
Confidence 366778887 389999999999 79999999965443
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=53.03 E-value=12 Score=25.24 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=16.4
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEGK 53 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~ 53 (147)
|+.++|+++++.|+|+|.
T Consensus 20 P~gV~V~i~~~~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGP 37 (100)
T ss_dssp CSSCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 588999999999999994
No 39
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=51.96 E-value=23 Score=25.29 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=29.2
Q ss_pred CeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEce
Q psy4755 20 RALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEE 56 (147)
Q Consensus 20 ~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~ 56 (147)
..|.-.+.|| .+++.+.|+-++++|.|+|+.-+.+
T Consensus 117 g~f~R~~~LP--~~vd~~~i~A~~~nGvL~I~lpK~~ 151 (161)
T 4eld_A 117 EEIYRTIKLP--ATVKEENASAKFENGVLSVILPKAE 151 (161)
T ss_dssp CEEEEEEECS--SCBCGGGCEEEEETTEEEEEEEBCG
T ss_pred ccEEEEEECC--CCcccccEEEEEECCEEEEEEEcCC
Confidence 3677788887 3799999999999999999996543
No 40
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=51.90 E-value=9.7 Score=23.02 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=17.5
Q ss_pred CCCeEEEEECCEEEEEEEEc
Q psy4755 36 SHEISIKTVDGFILVEGKHE 55 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~~~ 55 (147)
-.||.|+.++++++|+|.-+
T Consensus 32 yndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 32 YNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp CCSCEEEECSSCEEEEEECC
T ss_pred cccceeEEcCCEEEEEeEEc
Confidence 46999999999999999654
No 41
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=51.12 E-value=40 Score=25.05 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=30.9
Q ss_pred CCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCc
Q psy4755 36 SHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 100 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~PK~ 100 (147)
|+.++|+++++.++|+|.+ |- .+|.|. +.. +...+ ++|.|.|+.+..
T Consensus 9 P~gV~v~i~~~~vtVkGpk-------G~----L~~~~~-~~~-----v~i~~-~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN-------GS----VTRRLW-YPD-----IDVSV-DGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETT-------EE----EEEECC-CTT-----CEEEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC-------eE----EEEEEE-CCe-----EEEEE-ECCEEEEEcCCC
Confidence 4889999999999999943 22 233331 233 44556 589988876543
No 42
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=47.97 E-value=29 Score=24.64 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=29.4
Q ss_pred CeEEEEEEcCCCCCCCCCCeEEEEECCEEEEEEEEce
Q psy4755 20 RALTLPFCIPSFLGAPSHEISIKTVDGFILVEGKHEE 56 (147)
Q Consensus 20 ~~~~l~~~lpDvpG~~~edI~V~v~~~~L~I~g~~~~ 56 (147)
..|.-.+.|| .+++.+.|+-++++|.|+|+-.+..
T Consensus 104 g~F~R~~~LP--~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 104 GKFVRRFRLL--EDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CCEEEEEECS--SCCCGGGCEEEEETTEEEEEEECCC
T ss_pred cEEEEEEECC--CCccccceEEEEECCEEEEEEEccC
Confidence 5677788888 3799999999999999999996543
No 43
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=47.94 E-value=14 Score=25.86 Aligned_cols=26 Identities=12% Similarity=0.056 Sum_probs=22.2
Q ss_pred CCCCCCCCCeEEEEECCEEEEEEEEc
Q psy4755 30 SFLGAPSHEISIKTVDGFILVEGKHE 55 (147)
Q Consensus 30 DvpG~~~edI~V~v~~~~L~I~g~~~ 55 (147)
|.|..++-.|.|.++++.++++|.-.
T Consensus 1 ~~~~~~p~~i~V~v~~G~VTLsG~Vp 26 (132)
T 2kgs_A 1 GASALSLSLLSISRSGNTVTLIGDFP 26 (132)
T ss_dssp CCCCCCEEEEEEEECSSEEEEEEEES
T ss_pred CCCcccceeEEEEEECCEEEEEEECC
Confidence 34678889999999999999999654
No 44
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=45.80 E-value=30 Score=24.64 Aligned_cols=38 Identities=21% Similarity=0.384 Sum_probs=26.3
Q ss_pred CCcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 76 KDVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 76 ~~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
.++-.=.|+-.++.||+|.|++--... .....|.|...
T Consensus 78 ~G~~~IeVtf~iD~nGiL~Vsa~d~~t---g~~~~i~I~~~ 115 (151)
T 3dqg_A 78 RGVPQVEVTFDIDANGIVNVSARDRGT---GKEQQIVIQSS 115 (151)
T ss_dssp TTCSCEEEEEEECTTSEEEEEEEETTT---CCEEEEEEECS
T ss_pred CCCcEEEEEEEeccCcEEEEEEEEccC---CCEeEEEEecC
Confidence 344334577778899999999975443 45677888754
No 45
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=43.13 E-value=30 Score=24.61 Aligned_cols=38 Identities=21% Similarity=0.386 Sum_probs=26.0
Q ss_pred CCcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 76 KDVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 76 ~~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
.++-.=.|+-.++.||+|.|++--... .+...|.|...
T Consensus 78 ~G~~~I~Vtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~ 115 (152)
T 3h0x_A 78 RGVPQIEVTFALDANGILKVSATDKGT---GKSESITITND 115 (152)
T ss_dssp TTCSCEEEEEEECTTSEEEEEEEETTT---CCEEEEEEECC
T ss_pred CCCceEEEEEEEcCCCEEEEEEEEcCC---CcEeEEEEecC
Confidence 344334577778899999999975543 35667888753
No 46
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=41.88 E-value=25 Score=23.23 Aligned_cols=20 Identities=25% Similarity=0.361 Sum_probs=17.0
Q ss_pred CCCeEEEEECCEEEEEEEEc
Q psy4755 36 SHEISIKTVDGFILVEGKHE 55 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~~~ 55 (147)
-.||.|++++++++|+|.-+
T Consensus 76 yndinvtfdgdtvtvegqle 95 (106)
T 1qys_A 76 YNDINVTFDGDTVTVEGQLE 95 (106)
T ss_dssp CCEEEEEEETTEEEEEEEC-
T ss_pred CcceeEEEcCCeEEEEeEEc
Confidence 46999999999999999653
No 47
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=41.76 E-value=15 Score=23.46 Aligned_cols=22 Identities=23% Similarity=0.524 Sum_probs=20.1
Q ss_pred CCCCCCeEEEEECCEEEEEEEE
Q psy4755 33 GAPSHEISIKTVDGFILVEGKH 54 (147)
Q Consensus 33 G~~~edI~V~v~~~~L~I~g~~ 54 (147)
-|+.+.|.+...-+.|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEEC
T ss_pred EECCCEEEEEeCceEEEEEcCC
Confidence 5899999999999999999964
No 48
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=40.71 E-value=14 Score=28.62 Aligned_cols=46 Identities=20% Similarity=0.300 Sum_probs=31.3
Q ss_pred CCCeEEEEECCEEEEEEEEceeeCCcceEEEEEEEEEECCCCcccCCcEE-EcCCCCEEEEEEeCc
Q psy4755 36 SHEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTS-SLSSDGVLTITAPKR 100 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~i~A-~~~~dGvL~I~~PK~ 100 (147)
|++++|+++++.|+|+|.+ |-+.+ .|+..|+ . .. +||.|.|+.+..
T Consensus 54 P~gV~V~i~~~~VtVKGPk-------G~L~~------~~~~~v~-----i~~~-e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPL-------GELAL------TYPREVE-----LTKE-ESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSSEEEECCSS-------CCEEE------ECCSSCE-----EEEC-SSSCEEEECSSC
T ss_pred CCCCEEEEeCCEEEEECCC-------eEEEE------EcCCCEE-----EEEe-cCCEEEEEcCCC
Confidence 6889999999999999943 22222 3344443 4 55 589988886543
No 49
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=38.30 E-value=36 Score=24.97 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=27.1
Q ss_pred EEEEEEcCCCCCCCCCCeEEEE-ECCEEEEEEEEc
Q psy4755 22 LTLPFCIPSFLGAPSHEISIKT-VDGFILVEGKHE 55 (147)
Q Consensus 22 ~~l~~~lpDvpG~~~edI~V~v-~~~~L~I~g~~~ 55 (147)
|.=++.|| .+++.+.|+-++ ++|.|+|+.-+.
T Consensus 118 F~R~~~LP--~~Vd~~~i~A~~s~dGvL~I~lPK~ 150 (175)
T 2klr_A 118 FHRKYRIP--ADVDPLTITSSLSSDGVLTVNGPRK 150 (175)
T ss_dssp EEEEEECT--TTCCTTTCEEEECTTSCEEEEEECC
T ss_pred EEEEEECC--CCcChhHeEEEEcCCCEEEEEEECC
Confidence 66677887 489999999999 699999999654
No 50
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=38.26 E-value=31 Score=24.63 Aligned_cols=39 Identities=21% Similarity=0.424 Sum_probs=26.2
Q ss_pred CCCcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 75 PKDVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 75 P~~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
|.++-.=.|+-.++.||+|.|++--... .....|.|...
T Consensus 77 p~G~~~IeVtf~iD~nGiL~Vsa~d~~t---g~~~~i~I~~~ 115 (152)
T 3dob_A 77 PRGVPQIEVTFNIDANGILNVSAEDKST---GKSNRITIQNE 115 (152)
T ss_dssp CTTCCCEEEEEEECTTCCEEEEEEETTT---CCEEEEEECCC
T ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCC---CCEEEEEEEcC
Confidence 3444334577778899999999975443 35667777643
No 51
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=35.59 E-value=37 Score=23.83 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=24.3
Q ss_pred CcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 77 DVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 77 ~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
+...=.|+-.++.||+|.|++--... .....|.|...
T Consensus 79 G~~~I~V~f~id~nGiL~V~a~d~~t---g~~~~i~i~~~ 115 (152)
T 2op6_A 79 GVPQIEVTFEIDVNGILHVSAEDKGT---GNKNKLTITND 115 (152)
T ss_dssp TCSCEEEEEEECTTSCEEEEEEETTT---CCEEEEEECSS
T ss_pred CCceEEEEEEECCCcEEEEEEEEecC---CcEEEEEeecc
Confidence 44333467777899999999863332 34567777643
No 52
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=34.69 E-value=42 Score=24.76 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=25.7
Q ss_pred CCcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 76 KDVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 76 ~~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
.++-.=.|+-.++.||+|.|++--... .+...|.|...
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~t---g~~~~i~I~~~ 135 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGT---GREQQIVIQSS 135 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTT---CCEEEEEESCC
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCC---CCEeeEEEecC
Confidence 344334577778899999999875443 35667777754
No 53
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=33.37 E-value=41 Score=25.45 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=26.0
Q ss_pred CCcccCCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 76 KDVEIEKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 76 ~~Vd~~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
.++-.=.|+-.++.||+|.|++--... .....|.|...
T Consensus 79 ~G~~~IeVtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~ 116 (219)
T 4e81_A 79 RGMPQIEVTFDIDADGILHVSAKDKNS---GKEQKITIKAS 116 (219)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTT---CCEEEEEECTT
T ss_pred CCCceEEEEEEeCCCCCEeeeeecccc---CccceEeeecc
Confidence 344334577778899999999975543 45667777643
No 54
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=30.84 E-value=40 Score=23.67 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=14.3
Q ss_pred CcEEEcCCCCEEEEEEeC
Q psy4755 82 KVTSSLSSDGVLTITAPK 99 (147)
Q Consensus 82 ~i~A~~~~dGvL~I~~PK 99 (147)
.+.+.+. +|||+|+++.
T Consensus 48 ~~Dve~~-~gVLti~f~~ 64 (123)
T 3oeq_A 48 IPDVELS-HGVMTLEIPA 64 (123)
T ss_dssp CCEEEEC-SSEEEEECTT
T ss_pred ceEEEcc-CCEEEEEECC
Confidence 3789995 9999999973
No 55
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=29.76 E-value=41 Score=24.91 Aligned_cols=17 Identities=12% Similarity=0.309 Sum_probs=15.7
Q ss_pred CCCeEEEEECCEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEG 52 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g 52 (147)
|+.++|+++++.|+|+|
T Consensus 11 P~gV~V~i~~~~VtVkG 27 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKG 27 (177)
T ss_dssp CTTCEEEEETTEEEEEE
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 57899999999999999
No 56
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=29.54 E-value=28 Score=23.68 Aligned_cols=17 Identities=35% Similarity=0.552 Sum_probs=14.4
Q ss_pred CCcEEEcCCCCEEEEEEe
Q psy4755 81 EKVTSSLSSDGVLTITAP 98 (147)
Q Consensus 81 ~~i~A~~~~dGvL~I~~P 98 (147)
..+.+.+. +|||+|+++
T Consensus 28 ~d~D~e~~-~gVLti~f~ 44 (106)
T 1ew4_A 28 SDIDCEIN-GGVLTITFE 44 (106)
T ss_dssp SCCEEEEE-TTEEEEECT
T ss_pred CCEeeecc-CCEEEEEEC
Confidence 34889995 999999996
No 57
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=28.96 E-value=43 Score=25.08 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=16.3
Q ss_pred CCCeEEEEECCEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEG 52 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g 52 (147)
|++++|+++++.++|+|
T Consensus 13 P~gV~v~i~~~~V~VkG 29 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKG 29 (188)
T ss_dssp CTTCEEEEETTEEEEEE
T ss_pred CCCcEEEEeCCEEEEEc
Confidence 78999999999999999
No 58
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=28.82 E-value=36 Score=25.25 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=16.2
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEGK 53 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~ 53 (147)
|++++|+++++.|+|+|.
T Consensus 12 P~gV~v~i~~~~v~VkGp 29 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGP 29 (180)
T ss_dssp CTTCEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeC
Confidence 589999999999999993
No 59
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=28.59 E-value=44 Score=25.09 Aligned_cols=18 Identities=11% Similarity=0.270 Sum_probs=16.4
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEGK 53 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~ 53 (147)
|++++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGP 30 (191)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 589999999999999993
No 60
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=28.40 E-value=44 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.460 Sum_probs=15.9
Q ss_pred CCCeEEEEECCEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEG 52 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g 52 (147)
|++++|+++++.++|+|
T Consensus 13 P~gV~v~i~~~~V~VkG 29 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEG 29 (190)
T ss_dssp CTTCEEEEETTEEEEEE
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 58999999999999999
No 61
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.37 E-value=54 Score=22.52 Aligned_cols=31 Identities=3% Similarity=0.185 Sum_probs=22.8
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy4755 67 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 98 (147)
Q Consensus 67 ~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~P 98 (147)
+..=.|.||.+++..++...+. ..-|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMV-GKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEE-TTEEEEEET
T ss_pred EEEEEEECCCCCCccceEEEEE-CCEEEEEEC
Confidence 4566789999999999999995 888888763
No 62
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=26.59 E-value=50 Score=24.77 Aligned_cols=17 Identities=18% Similarity=0.401 Sum_probs=16.1
Q ss_pred CCCeEEEEECCEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEG 52 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g 52 (147)
|+.++|+++++.|+|+|
T Consensus 13 P~gV~V~i~~~~VtVkG 29 (192)
T 2zkr_e 13 PENVDITLKGRTVIVKG 29 (192)
T ss_dssp CTTCEEEEETTEEEEEE
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 68999999999999999
No 63
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=25.09 E-value=81 Score=24.60 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=28.1
Q ss_pred CCCCCeEEEEECCEEEEEEEEceee---CCcceEEEEEEEEEECCCC
Q psy4755 34 APSHEISIKTVDGFILVEGKHEEKE---DEHGFISRQFKRRYLLPKD 77 (147)
Q Consensus 34 ~~~edI~V~v~~~~L~I~g~~~~~~---~~~~~~~r~F~R~~~LP~~ 77 (147)
+.++++.| +++.|.|++.+.... ....|.+..|+=++.||.+
T Consensus 30 w~~~Nv~v--~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 30 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp ECGGGEEE--ETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCCEEE--ECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 56777776 788999998643210 1122445678999999975
No 64
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.08 E-value=37 Score=25.36 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=16.1
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4755 36 SHEISIKTVDGFILVEGK 53 (147)
Q Consensus 36 ~edI~V~v~~~~L~I~g~ 53 (147)
|++++|+++++.++|+|.
T Consensus 14 P~gV~v~i~~~~V~VkGp 31 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGP 31 (184)
T ss_dssp CSSCEEEESSSEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 489999999999999993
No 65
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=23.54 E-value=80 Score=23.71 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=22.1
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4755 81 EKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 116 (147)
Q Consensus 81 ~~i~A~~~~dGvL~I~~PK~~~~~~~~~r~I~I~~~ 116 (147)
=.|+-.++.||+|.|++--... .....|.|...
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 113 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKST---GVEASIQVKPS 113 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTT---CCEEEEEECCC
T ss_pred EEEEEEECCCCcEEEEeecccc---cccceEEEEec
Confidence 3466677799999999853332 34567777643
No 66
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=20.05 E-value=1.1e+02 Score=21.76 Aligned_cols=31 Identities=6% Similarity=0.154 Sum_probs=26.2
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy4755 67 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 98 (147)
Q Consensus 67 ~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~P 98 (147)
+..=+|.||.++...+|...++ ..-|.|.+.
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i~-~~~L~v~~k 54 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGLQ-SRHVALAVG 54 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEEC-SSEEEEEET
T ss_pred EEEEEEECCCCCcccceEEEEe-cCEEEEEEC
Confidence 4666799999999999999996 888888873
Done!