Query psy4756
Match_columns 125
No_of_seqs 107 out of 1034
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 16:53:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1e_A Alpha-crystallin A chai 99.9 3.6E-24 1.2E-28 146.9 13.0 93 2-94 7-105 (106)
2 2klr_A Alpha-crystallin B chai 99.9 1.6E-23 5.5E-28 155.4 11.3 99 3-103 69-171 (175)
3 2wj5_A Heat shock protein beta 99.9 5.8E-23 2E-27 139.7 11.5 89 3-94 7-99 (101)
4 3q9p_A Heat shock protein beta 99.9 2.6E-22 8.7E-27 132.6 10.2 78 3-80 3-84 (85)
5 2y1y_A Alpha-crystallin B chai 99.9 7.7E-22 2.6E-26 131.4 11.6 75 9-83 12-86 (90)
6 4eld_A MJ16.5-P1, small heat s 99.8 1.5E-20 5.2E-25 136.8 8.3 89 2-94 61-161 (161)
7 3gla_A Low molecular weight he 99.8 3.5E-19 1.2E-23 119.8 10.8 80 2-82 9-99 (100)
8 4fei_A Heat shock protein-rela 99.8 1.3E-18 4.3E-23 118.0 11.3 80 2-83 11-97 (102)
9 3aab_A Putative uncharacterize 99.8 4.3E-19 1.5E-23 123.9 9.1 80 2-83 29-118 (123)
10 1gme_A Heat shock protein 16.9 99.8 3.6E-19 1.2E-23 128.7 8.8 91 2-94 48-150 (151)
11 2bol_A TSP36, small heat shock 99.8 6.7E-19 2.3E-23 140.8 10.1 94 9-108 118-212 (314)
12 2bol_A TSP36, small heat shock 99.7 4.2E-17 1.4E-21 130.4 7.5 71 9-80 239-313 (314)
13 1rl1_A Suppressor of G2 allele 98.2 3E-06 1E-10 57.4 6.3 70 4-82 16-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.2 2.9E-06 1E-10 55.0 5.2 70 4-82 9-82 (92)
15 3igf_A ALL4481 protein; two-do 96.5 0.006 2.1E-07 49.2 6.6 61 8-82 310-371 (374)
16 2k8q_A Protein SHQ1; beta-sand 95.5 0.014 4.9E-07 41.1 4.1 59 12-83 22-84 (134)
17 3eud_A Protein SHQ1; CS domain 95.0 0.14 4.7E-06 35.2 7.6 36 48-83 61-98 (115)
18 1x5m_A Calcyclin-binding prote 94.7 0.23 7.9E-06 33.8 8.4 64 10-82 37-104 (127)
19 1wgv_A KIAA1068 protein; CS do 93.5 0.69 2.4E-05 31.2 8.8 70 4-82 26-102 (124)
20 1wh0_A Ubiquitin carboxyl-term 93.2 0.32 1.1E-05 33.8 6.7 72 9-82 36-112 (134)
21 3qor_A Nuclear migration prote 93.1 0.3 1E-05 33.1 6.4 57 14-82 40-97 (121)
22 2o30_A Nuclear movement protei 92.1 0.74 2.5E-05 31.4 7.4 56 12-80 24-79 (131)
23 1ejf_A Progesterone receptor P 91.5 0.65 2.2E-05 31.4 6.5 69 4-82 10-82 (125)
24 1wfi_A Nuclear distribution ge 90.1 0.56 1.9E-05 31.9 5.1 67 4-82 14-88 (131)
25 2cg9_X CO-chaperone protein SB 89.9 0.21 7.3E-06 34.5 2.9 66 12-82 32-98 (134)
26 2rh0_A NUDC domain-containing 89.3 1.2 4.2E-05 31.4 6.6 58 12-82 33-91 (157)
27 3q9p_A Heat shock protein beta 79.4 3.1 0.00011 26.0 4.4 34 47-82 8-41 (85)
28 2kmw_A Uncharacterized protein 78.1 3.4 0.00011 28.9 4.7 67 4-82 11-82 (150)
29 2y1y_A Alpha-crystallin B chai 77.1 3.6 0.00012 25.9 4.2 33 47-81 7-39 (90)
30 3gla_A Low molecular weight he 76.2 4.6 0.00016 25.6 4.6 34 47-82 15-48 (100)
31 2wj5_A Heat shock protein beta 75.8 4 0.00014 26.4 4.2 33 47-81 12-44 (101)
32 4fei_A Heat shock protein-rela 75.7 4.5 0.00015 26.0 4.5 32 47-80 17-48 (102)
33 3l1e_A Alpha-crystallin A chai 74.5 4.9 0.00017 26.1 4.5 32 47-80 13-44 (106)
34 3aab_A Putative uncharacterize 70.2 9.6 0.00033 25.2 5.2 34 47-82 35-69 (123)
35 1q5l_A Chaperone protein DNAK; 61.7 16 0.00054 24.8 5.1 32 62-96 101-132 (135)
36 4eld_A MJ16.5-P1, small heat s 61.4 14 0.00049 25.5 4.9 34 47-82 67-100 (161)
37 2klr_A Alpha-crystallin B chai 59.6 11 0.00037 27.0 4.0 33 47-81 74-106 (175)
38 1gme_A Heat shock protein 16.9 56.5 21 0.00072 24.5 5.1 35 47-82 54-88 (151)
39 2cql_A OK/SW-CL.103, 60S ribos 53.1 12 0.00042 24.4 3.2 19 16-34 20-38 (100)
40 1nkw_E 50S ribosomal protein L 51.5 27 0.00092 26.0 5.1 19 16-34 39-57 (212)
41 3dqg_A Heat shock 70 kDa prote 51.0 28 0.00096 24.0 5.0 33 61-96 83-115 (151)
42 1qys_A TOP7; alpha-beta, novel 50.2 16 0.00056 23.4 3.3 23 14-36 74-96 (106)
43 3h0x_A 78 kDa glucose-regulate 46.7 30 0.001 23.8 4.6 32 62-96 84-115 (152)
44 2gjh_A Designed protein; oblig 45.0 16 0.00055 21.4 2.4 22 15-36 31-52 (62)
45 2ks0_A Uncharacterized protein 44.4 13 0.00046 23.0 2.1 26 9-34 13-38 (71)
46 3dob_A Heat shock 70 kDa prote 41.9 28 0.00097 24.0 3.8 33 61-96 83-115 (152)
47 3n8e_A Stress-70 protein, mito 37.9 39 0.0013 24.1 4.1 32 62-96 104-135 (182)
48 2o30_A Nuclear movement protei 36.3 92 0.0032 20.6 5.8 30 47-77 15-44 (131)
49 3oeq_A Frataxin homolog, mitoc 36.0 34 0.0012 23.3 3.3 15 63-78 49-63 (123)
50 2op6_A Heat shock 70 kDa prote 35.5 41 0.0014 22.8 3.8 32 62-96 84-115 (152)
51 4e81_A Chaperone protein DNAK; 34.4 41 0.0014 24.6 3.8 32 62-96 85-116 (219)
52 1ew4_A CYAY protein; friedreic 33.6 24 0.00084 23.2 2.2 16 62-78 29-44 (106)
53 2uwa_A Cellulase; glycoside hy 30.5 53 0.0018 24.8 4.0 53 13-67 29-84 (274)
54 1rl6_A Protein (ribosomal prot 29.9 43 0.0015 24.0 3.2 18 16-33 11-28 (177)
55 4a17_E RPL9, 60S ribosomal pro 28.8 45 0.0016 24.1 3.2 18 16-33 13-30 (188)
56 3u5e_H L8, RP24, YL11, 60S rib 28.5 46 0.0016 24.1 3.2 18 16-33 13-30 (191)
57 1vq8_E 50S ribosomal protein L 28.3 47 0.0016 23.9 3.2 18 16-33 9-26 (178)
58 3iz5_F 60S ribosomal protein L 28.2 47 0.0016 24.1 3.2 18 16-33 13-30 (190)
59 3v2d_H 50S ribosomal protein L 27.7 38 0.0013 24.3 2.6 19 16-34 12-30 (180)
60 2zkr_e 60S ribosomal protein L 26.9 51 0.0018 23.9 3.2 19 15-33 12-30 (192)
61 3j21_F 50S ribosomal protein L 26.3 66 0.0022 23.2 3.7 29 48-82 7-35 (184)
62 2rh0_A NUDC domain-containing 25.3 1.4E+02 0.0047 20.6 5.1 30 47-77 24-53 (157)
63 1u00_A HSC66, chaperone protei 25.1 78 0.0027 23.0 4.0 31 63-96 83-113 (227)
64 2kgs_A Uncharacterized protein 24.9 41 0.0014 22.6 2.2 25 11-35 2-26 (132)
65 1wgv_A KIAA1068 protein; CS do 23.7 1.6E+02 0.0053 19.1 6.3 31 47-78 30-61 (124)
66 3t3l_A Frataxin, mitochondrial 23.0 52 0.0018 22.4 2.4 17 61-78 40-56 (129)
67 1nvp_C Transcription initiatio 21.0 31 0.0011 21.6 0.9 30 41-76 32-61 (76)
68 3iln_A Laminarinase; jelly ROW 20.5 1.6E+02 0.0054 21.5 4.9 40 16-57 46-97 (251)
69 2nwt_A UPF0165 protein AF_2212 20.4 67 0.0023 19.7 2.3 17 61-78 3-19 (69)
No 1
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=3.6e-24 Score=146.87 Aligned_cols=93 Identities=34% Similarity=0.673 Sum_probs=80.9
Q ss_pred ceecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEE
Q psy4756 2 LRETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 77 (125)
Q Consensus 2 ~~e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~l 77 (125)
++|+++.+. +|||+++||+|.++++.|+|+|++....++.+|..|+|.|+|.||.+||.++|+|+|++||+|+|++
T Consensus 7 i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~ 86 (106)
T 3l1e_A 7 VRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFSG 86 (106)
T ss_dssp EEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEEE
T ss_pred EEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 456777654 5999999999999999999999987766667898899999999999999999999996699999999
Q ss_pred eCcCCCC--CCCCeEEeee
Q psy4756 78 PKRTLQD--KTTERPVPIV 94 (125)
Q Consensus 78 Pk~~~~~--~~~~r~I~I~ 94 (125)
||..... ...+|+|+|.
T Consensus 87 PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 87 PKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EBCCCCTTTTSSSCCCCCC
T ss_pred EccCcccccCCCCeEeeec
Confidence 9998752 1368999986
No 2
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.90 E-value=1.6e-23 Score=155.36 Aligned_cols=99 Identities=43% Similarity=0.722 Sum_probs=69.9
Q ss_pred eecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEe
Q psy4756 3 RETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 3 ~e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lP 78 (125)
.|+++.+. ||||+++||+|+++++.|+|+|+++...++.+|+.|+|.|+|.||.+||.++|+|+|++||+|+|++|
T Consensus 69 ~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lP 148 (175)
T 2klr_A 69 RLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGP 148 (175)
T ss_dssp CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEE
T ss_pred EEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEE
Confidence 45666554 59999999999999999999999877655678999999999999999999999999956999999999
Q ss_pred CcCCCCCCCCeEEeeeeCCCCCCCC
Q psy4756 79 KRTLQDKTTERPVPIVQTGVPALKP 103 (125)
Q Consensus 79 k~~~~~~~~~r~I~I~~~~~~a~~~ 103 (125)
|.... ...|+|+|+..+.+|...
T Consensus 149 K~~~~--~~~r~I~I~~~~~~~~~~ 171 (175)
T 2klr_A 149 RKQVS--GPERTIPITREEKPAVTA 171 (175)
T ss_dssp CC-----------------------
T ss_pred CCCCC--CCCeEEEEecCCcccccc
Confidence 98765 246999999888776643
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.89 E-value=5.8e-23 Score=139.65 Aligned_cols=89 Identities=40% Similarity=0.586 Sum_probs=74.6
Q ss_pred eecCceE----EecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEe
Q psy4756 3 RETGQRG----TKYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 3 ~e~~~~l----dvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lP 78 (125)
.|+++.+ ++|||+++||+|.++++.|+|+|++....++.+|+.++|.|+|.||.+||.++|+|+|++||+|+|++|
T Consensus 7 ~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lP 86 (101)
T 2wj5_A 7 PTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAT 86 (101)
T ss_dssp CCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEEEEC
T ss_pred EEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEEEEE
Confidence 4555554 469999999999999999999999876555667888999999999999999999999966999999999
Q ss_pred CcCCCCCCCCeEEeee
Q psy4756 79 KRTLQDKTTERPVPIV 94 (125)
Q Consensus 79 k~~~~~~~~~r~I~I~ 94 (125)
|.... +++.++|.
T Consensus 87 K~~~~---~~~~~~i~ 99 (101)
T 2wj5_A 87 PASAQ---ASLPSPPA 99 (101)
T ss_dssp BCCCC---CSSCC---
T ss_pred CCCcC---CCCCCccc
Confidence 99766 56666664
No 4
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.88 E-value=2.6e-22 Score=132.63 Aligned_cols=78 Identities=42% Similarity=0.701 Sum_probs=64.2
Q ss_pred eecCceE----EecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEe
Q psy4756 3 RETGQRG----TKYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 3 ~e~~~~l----dvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lP 78 (125)
+||++.+ |+|||+++||+|.++++.|+|+|++....++.+|.+++|.|+|.||.+||.++|+|+|..||+|+|++|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 4666655 459999999999999999999999876554556778899999999999999999999933999999999
Q ss_pred Cc
Q psy4756 79 KR 80 (125)
Q Consensus 79 k~ 80 (125)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 96
No 5
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.88 E-value=7.7e-22 Score=131.38 Aligned_cols=75 Identities=45% Similarity=0.768 Sum_probs=66.4
Q ss_pred EEecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCCC
Q psy4756 9 GTKYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTLQ 83 (125)
Q Consensus 9 ldvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~~ 83 (125)
+++|||+++||+|.++++.|+|+|++....++.+|+.++|.|+|.||.+||.++|+|+|++||+|+|++||...+
T Consensus 12 ~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 12 LDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQVS 86 (90)
T ss_dssp EECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECBC---
T ss_pred EECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEcCCCC
Confidence 456999999999999999999999987765566788899999999999999999999995599999999998765
No 6
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.83 E-value=1.5e-20 Score=136.83 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=73.6
Q ss_pred ceecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceee--CCCceE--EE----EEEEEEECCCCCccCCcEEEeCC
Q psy4756 2 LRETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKE--DEHGFI--SR----QFKRRYLLPKDVEIEKVTSSLSS 69 (125)
Q Consensus 2 ~~e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~--~~~~~~--~r----~f~R~~~LP~~vd~d~i~A~~~~ 69 (125)
+.|+++.+. +|||+++||+|.++++.|+|+|++.... +..+|. +| .|.|+|.||.+||.++|+|+| +
T Consensus 61 i~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~-~ 139 (161)
T 4eld_A 61 IIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-E 139 (161)
T ss_dssp EEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-E
T ss_pred EEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-E
Confidence 456776554 5999999999999999999999987632 222343 23 799999999999999999999 8
Q ss_pred CCEEEEEEeCcCCCCCCCCeEEeee
Q psy4756 70 DGVLTITAPKRTLQDKTTERPVPIV 94 (125)
Q Consensus 70 nGvL~I~lPk~~~~~~~~~r~I~I~ 94 (125)
||+|+|++||.... ++|+|+|+
T Consensus 140 nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 140 NGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp TTEEEEEEEBCGGG---SCCCCCCC
T ss_pred CCEEEEEEEcCCCC---CCcEeecC
Confidence 99999999998765 57889884
No 7
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.80 E-value=3.5e-19 Score=119.84 Aligned_cols=80 Identities=24% Similarity=0.464 Sum_probs=65.7
Q ss_pred ceecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceee--CCCceEE-----EEEEEEEECCCCCccCCcEEEeCCC
Q psy4756 2 LRETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTSSLSSD 70 (125)
Q Consensus 2 ~~e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~--~~~~~~~-----r~f~R~~~LP~~vd~d~i~A~~~~n 70 (125)
+.|+++.+. +|||+++||+|.++++.|+|+|++.... ....|.. +.|.|+|.||.+||.++|+|+| +|
T Consensus 9 i~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~-~~ 87 (100)
T 3gla_A 9 IKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG-RN 87 (100)
T ss_dssp EEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE-ET
T ss_pred EEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE-eC
Confidence 456776554 5999999999999999999999986542 2233543 2799999999999999999999 89
Q ss_pred CEEEEEEeCcCC
Q psy4756 71 GVLTITAPKRTL 82 (125)
Q Consensus 71 GvL~I~lPk~~~ 82 (125)
|+|+|++||...
T Consensus 88 GvL~I~~pK~~~ 99 (100)
T 3gla_A 88 GVLEIRIPKRPA 99 (100)
T ss_dssp TEEEEEEEBC--
T ss_pred CEEEEEEecCCC
Confidence 999999999864
No 8
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.79 E-value=1.3e-18 Score=118.04 Aligned_cols=80 Identities=24% Similarity=0.264 Sum_probs=66.7
Q ss_pred ceecCceE----EecCcCCCCeEEEEECCEEEEEEEEceeeCCCc---eEEEEEEEEEECCCCCccCCcEEEeCCCCEEE
Q psy4756 2 LRETGQRG----TKYYLDKAEISIKTVDGFILVEGKHEEKEDEHG---FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT 74 (125)
Q Consensus 2 ~~e~~~~l----dvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~---~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~ 74 (125)
+.|+++.+ ++|||+++||+|.++++.|+|+|++.... .+. ...+.|.|+|.||.+||.+.|+|.| +||+|+
T Consensus 11 i~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~-~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~GvL~ 88 (102)
T 4fei_A 11 WRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTE-HLLRSERPSGRFVRELAFPEPVRPASGVASL-AGGVLT 88 (102)
T ss_dssp EEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCS-SCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ETTEEE
T ss_pred EEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCC-CEEEEEEeccEEEEEEECCCCcchhHcEEEE-ECCEEE
Confidence 45677754 45999999999999999999999986431 221 1345899999999999999999999 899999
Q ss_pred EEEeCcCCC
Q psy4756 75 ITAPKRTLQ 83 (125)
Q Consensus 75 I~lPk~~~~ 83 (125)
|++||..+.
T Consensus 89 I~lpK~~~~ 97 (102)
T 4fei_A 89 VRFEKLRPT 97 (102)
T ss_dssp EEEEBSSCC
T ss_pred EEEEccCcc
Confidence 999998765
No 9
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.79 E-value=4.3e-19 Score=123.91 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=68.3
Q ss_pred ceecCceEE----ecCcCCCCeEEEEEC-CEEEEEEEEceeeCCCceEEE----EEEEEEECCCCCccCCc-EEEeCCCC
Q psy4756 2 LRETGQRGT----KYYLDKAEISIKTVD-GFILVEGKHEEKEDEHGFISR----QFKRRYLLPKDVEIEKV-TSSLSSDG 71 (125)
Q Consensus 2 ~~e~~~~ld----vpGf~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~r----~f~R~~~LP~~vd~d~i-~A~~~~nG 71 (125)
+.|+++.+. +|||+++||+|.+++ +.|+|+|++.... +.+|..+ +|.|+|.||.+||.++| +|.| +||
T Consensus 29 i~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~-~~G 106 (123)
T 3aab_A 29 MYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY-ENG 106 (123)
T ss_dssp EEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE-ETT
T ss_pred EEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE-cCC
Confidence 356776655 599999999999999 9999999987644 3456544 89999999999999999 9999 899
Q ss_pred EEEEEEeCcCCC
Q psy4756 72 VLTITAPKRTLQ 83 (125)
Q Consensus 72 vL~I~lPk~~~~ 83 (125)
+|+|++||....
T Consensus 107 vL~I~lPK~~~~ 118 (123)
T 3aab_A 107 VLTIRIPIAGTS 118 (123)
T ss_dssp EEEEEEEGGGEE
T ss_pred EEEEEEEcCCCC
Confidence 999999998754
No 10
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.79 E-value=3.6e-19 Score=128.68 Aligned_cols=91 Identities=24% Similarity=0.454 Sum_probs=73.1
Q ss_pred ceecCceEE----ecCcCCCCeEEEEE-CCEEEEEEEEceee--CCCceEE-----EEEEEEEECCCCCccCCcEEEeCC
Q psy4756 2 LRETGQRGT----KYYLDKAEISIKTV-DGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTSSLSS 69 (125)
Q Consensus 2 ~~e~~~~ld----vpGf~~edI~V~v~-~~~L~I~g~~~~~~--~~~~~~~-----r~f~R~~~LP~~vd~d~i~A~~~~ 69 (125)
+.|+++.+. +|||+++||+|.++ ++.|+|+|++.... +..+|.. +.|.|+|.||.+||.++|+|+| +
T Consensus 48 i~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~ 126 (151)
T 1gme_A 48 WKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL-E 126 (151)
T ss_dssp EEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEE-E
T ss_pred EEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEE-E
Confidence 356776655 59999999999995 78999999886542 2334543 3799999999999999999999 8
Q ss_pred CCEEEEEEeCcCCCCCCCCeEEeee
Q psy4756 70 DGVLTITAPKRTLQDKTTERPVPIV 94 (125)
Q Consensus 70 nGvL~I~lPk~~~~~~~~~r~I~I~ 94 (125)
||+|+|++||..... ...++|+|+
T Consensus 127 nGvL~I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 127 NGVLTVTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp TTEEEEEEECCCCCT-TCCCCCCCC
T ss_pred CCEEEEEEEccCcCC-CCCeEeeeC
Confidence 999999999998653 245778775
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.78 E-value=6.7e-19 Score=140.77 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=79.9
Q ss_pred EEecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCC-CCEEEEEEeCcCCCCCCC
Q psy4756 9 GTKYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSS-DGVLTITAPKRTLQDKTT 87 (125)
Q Consensus 9 ldvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~-nGvL~I~lPk~~~~~~~~ 87 (125)
++||||+++||+|.++++.|+|+|++.... +.+..+++|.|+|.||.+||.++|+|+| + ||+|+|++||..+.
T Consensus 118 ~dlPG~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~-~~nGVL~I~lPK~~~~---- 191 (314)
T 2bol_A 118 FNVKNFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATI-TTDDVLVIEAPVNEPN---- 191 (314)
T ss_dssp EECTTCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEE-CSSSEEEEEEEBSSCC----
T ss_pred EECCCCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEE-eCCCEEEEEEeccCcc----
Confidence 456999999999999999999999987543 3356667999999999999999999999 7 99999999998754
Q ss_pred CeEEeeeeCCCCCCCCCCCCC
Q psy4756 88 ERPVPIVQTGVPALKPQAPSS 108 (125)
Q Consensus 88 ~r~I~I~~~~~~a~~~~~~~~ 108 (125)
.+.|+|...+..++++....+
T Consensus 192 ~~~I~it~~~ql~Iqp~s~~q 212 (314)
T 2bol_A 192 YKAIKLSPEKGLAIQPSEVQE 212 (314)
T ss_dssp TTTEEEETTTEEEECCBCCSS
T ss_pred cceeecccCCccCcCCCcccc
Confidence 456999998988887644443
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.68 E-value=4.2e-17 Score=130.38 Aligned_cols=71 Identities=17% Similarity=0.291 Sum_probs=58.1
Q ss_pred EEe-cCcCCCCeEEEEECCEEEEEEEEceeeCCC---ceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCc
Q psy4756 9 GTK-YYLDKAEISIKTVDGFILVEGKHEEKEDEH---GFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 80 (125)
Q Consensus 9 ldv-pGf~~edI~V~v~~~~L~I~g~~~~~~~~~---~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~ 80 (125)
+++ |||+|+||+|+++++.|+|+|+++.+.+.+ .+.+++|.|+|.||++||.++|+|+| +||||+|++||.
T Consensus 239 ~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~dGvL~i~~Pk~ 313 (314)
T 2bol_A 239 LKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEI-VDGLMVVEAPLF 313 (314)
T ss_dssp EECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEE-ETTEEEEEEEEE
T ss_pred EEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEE-eCCEEEEEEecC
Confidence 445 999999999999999999999987654321 23345899999999999999999999 899999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.21 E-value=3e-06 Score=57.38 Aligned_cols=70 Identities=11% Similarity=0.068 Sum_probs=58.4
Q ss_pred ecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeC
Q psy4756 4 ETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 79 (125)
Q Consensus 4 e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk 79 (125)
+|.+.+. +||+.++++.|.+..+.|.|++.... + ..|...+.|+..|+++..++++ .+|.|+|+|+|
T Consensus 16 Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~~e~s~~~~-~~~~l~i~L~K 86 (114)
T 1rl1_A 16 QTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS---G-----EDYNLKLELLHPIIPEQSTFKV-LSTKIEIKLKK 86 (114)
T ss_dssp ECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT---S-----SEEEEEECBSSCCCGGGEEEEE-CSSSEEEEEEC
T ss_pred eCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC---C-----cEEEEEeeCCCcCCccccEEEE-ECCEEEEEEEc
Confidence 4555555 49999999999999999999987431 1 2477889999999999999999 79999999999
Q ss_pred cCC
Q psy4756 80 RTL 82 (125)
Q Consensus 80 ~~~ 82 (125)
...
T Consensus 87 ~~~ 89 (114)
T 1rl1_A 87 PEA 89 (114)
T ss_dssp SSC
T ss_pred CCC
Confidence 864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.16 E-value=2.9e-06 Score=55.04 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=57.6
Q ss_pred ecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeC
Q psy4756 4 ETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 79 (125)
Q Consensus 4 e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk 79 (125)
+|.+.+. +||+.++++.|.+..+.|.|++.... + ..|...+.|+..|+++..++++ .+|.|+|+|.|
T Consensus 9 Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~~~~s~~~~-~~~~l~i~L~K 79 (92)
T 2xcm_C 9 QKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG---E-----DAYYLQPRLFGKIIPDKCKYEV-LSTKIEICLAK 79 (92)
T ss_dssp EETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT---S-----CCEEECCBBSSCBCGGGCEEEE-CSSCEEEEEEB
T ss_pred eCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC---C-----cEEEEeeEcCCccCchhEEEEE-ECCEEEEEEEc
Confidence 4555544 59999999999999999999986421 1 2467788999999999999999 79999999999
Q ss_pred cCC
Q psy4756 80 RTL 82 (125)
Q Consensus 80 ~~~ 82 (125)
...
T Consensus 80 ~~~ 82 (92)
T 2xcm_C 80 ADI 82 (92)
T ss_dssp SSS
T ss_pred CCC
Confidence 864
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.46 E-value=0.006 Score=49.22 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=49.6
Q ss_pred eEEecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccC-CcEEEeCCCCEEEEEEeCcCC
Q psy4756 8 RGTKYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIE-KVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 8 ~ldvpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d-~i~A~~~~nGvL~I~lPk~~~ 82 (125)
++.+|||++++|++.-.++.|+|++. .|+|.|.||.....- -..|.| .||.|.|++-.++.
T Consensus 310 ~l~lP~~~~~~~~l~~~gdeL~v~~g-------------~~rR~i~LP~~L~~~~v~~A~~-~~~~L~i~~~~~~~ 371 (374)
T 3igf_A 310 RLFLPGFDKKQVKLTQYGPEVTVEAG-------------DQRRNIFLPPALSGRPITGAKF-QNNYLIISFLEHHH 371 (374)
T ss_dssp EEECTTCCGGGCEEEEETTEEEEEET-------------TEEEEEECCTTTTTCCEEEEEE-ETTEEEEEECCC--
T ss_pred EEECCCCCHHHeEEEEECCeEEEEEC-------------CEeecccCCHHHcCCCccccEE-ECCEEEEEEehhcc
Confidence 35569999999999999999999862 279999999986554 467899 89999999876543
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=95.51 E-value=0.014 Score=41.11 Aligned_cols=59 Identities=14% Similarity=0.261 Sum_probs=42.7
Q ss_pred cCcC--CCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCC-ccCCcEEEeC-CCCEEEEEEeCcCCC
Q psy4756 12 YYLD--KAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-SDGVLTITAPKRTLQ 83 (125)
Q Consensus 12 pGf~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~v-d~d~i~A~~~-~nGvL~I~lPk~~~~ 83 (125)
|..+ ..++++.|++..+..... -|.=++.||..| +.+.-+|+|. +.|.|+|++||..+.
T Consensus 22 P~~~~~~sdiei~v~~~~F~F~~~-------------PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 22 SNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp CSSCCCSSSCCCEECSSSEEECSS-------------SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred CccccCccccEEEEeCCEEEEecC-------------CeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCCC
Confidence 5544 555555555555544422 234569999998 9999999997 599999999998765
No 17
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.14 Score=35.18 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=30.6
Q ss_pred EEEEEECCCCC-ccCCcEEEeC-CCCEEEEEEeCcCCC
Q psy4756 48 FKRRYLLPKDV-EIEKVTSSLS-SDGVLTITAPKRTLQ 83 (125)
Q Consensus 48 f~R~~~LP~~v-d~d~i~A~~~-~nGvL~I~lPk~~~~ 83 (125)
+.=++.||..+ +.+.-+|+|. ++|.++|++||..+.
T Consensus 61 YyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 61 YYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp EEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred eEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 45579999996 7788899996 699999999999765
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.71 E-value=0.23 Score=33.77 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=50.5
Q ss_pred EecCc---CCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEE-CCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 10 TKYYL---DKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL-LPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 10 dvpGf---~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~-LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
.++|+ .++++.|.+..+.|.|.+.... + ..|.-.+. |-..|+++.-+..+ ..+.++|+|-|...
T Consensus 37 ~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~---~-----~~y~~~~~~L~~~I~~e~S~~~v-~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 37 TLTGVHQVPTENVQVHFTERSFDLLVKNLN---G-----KSYSMIVNNLLKPISVEGSSKKV-KTDTVLILCRKKVE 104 (127)
T ss_dssp ECTTTTTSCTTSEEEEECSSEEEEEECSCS---S-----SCEEEEEECBSSCCCTTTCEEEE-ETTEEEEEEECSSS
T ss_pred EeCCCCcCCccccEEEEEcCEEEEEEEcCC---C-----CcEEEEhHHhcCccCcccCEEEE-eCCEEEEEEEECCC
Confidence 34888 8999999999999999874221 1 12455674 88999999888888 68999999999864
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=93.50 E-value=0.69 Score=31.20 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=51.0
Q ss_pred ecCceEEe----c-Cc-CCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCE-EEEE
Q psy4756 4 ETGQRGTK----Y-YL-DKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-LTIT 76 (125)
Q Consensus 4 e~~~~ldv----p-Gf-~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGv-L~I~ 76 (125)
+|.+.+.+ | |. +++|+.|.+..+.|.|.++... +. .+.-...|...|+++.-.-++ .+|. |.|.
T Consensus 26 Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~-----~~---~~~~~~~L~~~I~~e~S~w~i-~~~k~v~i~ 96 (124)
T 1wgv_A 26 QDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN-----GE---RVLMEGKLTHKINTESSLWSL-EPGKCVLVN 96 (124)
T ss_dssp EETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS-----SE---EEEEEEEBSSCBCTTTCEEEE-CTTSEEEEE
T ss_pred EcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC-----CC---ceEEcccccCcCCCcCCEEEE-eCCCEEEEE
Confidence 34444443 5 77 8999999999999999875311 11 112346788999999999999 6775 9999
Q ss_pred EeCcCC
Q psy4756 77 APKRTL 82 (125)
Q Consensus 77 lPk~~~ 82 (125)
|-|...
T Consensus 97 L~K~~~ 102 (124)
T 1wgv_A 97 LSKVGE 102 (124)
T ss_dssp ECBSSS
T ss_pred EEECCC
Confidence 999853
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=93.16 E-value=0.32 Score=33.78 Aligned_cols=72 Identities=13% Similarity=0.032 Sum_probs=52.1
Q ss_pred EEecCcCCCCeEEEEECCEEEEEEEEceee-----CCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 9 GTKYYLDKAEISIKTVDGFILVEGKHEEKE-----DEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 9 ldvpGf~~edI~V~v~~~~L~I~g~~~~~~-----~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
+.++++.++++.|.+..+.|.|..+..... -..|- ...|.-.+.|-..|+++.-+..+ .++.+.|.|.|...
T Consensus 36 I~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~-~~~y~~~~~L~~~I~pe~S~~~v-~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 36 VYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGP-HTTFRWQVKLRNLIEPEQCTFCF-TASRIDICLRKRQS 112 (134)
T ss_dssp EECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCT-TSCEEEEEEBSSCEEEEEEEEEE-CSSEEEEEEEESSS
T ss_pred EEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCc-ceeEEEeccccccCCchhCEEEE-eCCEEEEEEEECCC
Confidence 445999999999999999999987532110 00000 01255567899999999888888 68999999999853
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=93.09 E-value=0.3 Score=33.07 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=44.4
Q ss_pred cCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCC-EEEEEEeCcCC
Q psy4756 14 LDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLTITAPKRTL 82 (125)
Q Consensus 14 f~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nG-vL~I~lPk~~~ 82 (125)
++++|+.|.+..+.|.|..+-. .-++ ...|...|+.+.-.-++ .+| .|.|+|-|...
T Consensus 40 ~~~kdv~V~i~~~~l~v~~kg~-----~~~~------~g~L~~~I~~deS~w~i-~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 40 LKGKDMVVDIQRRHLRVGLKGQ-----PAII------DGELYNEVKVEESSWLI-ADGAVVTVHLEKINK 97 (121)
T ss_dssp CCGGGEEEEEETTEEEEEETTS-----CCSE------EEEBSSCBCGGGCEEEE-ETTTEEEEEEEBSSS
T ss_pred ccccceEEEEEcCEEEEEEcCc-----ceEE------eccccccccccccEEEE-cCCCEEEEEEEECCC
Confidence 7899999999999999865311 1122 44688899999888889 687 99999988754
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=92.11 E-value=0.74 Score=31.38 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=43.0
Q ss_pred cCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCc
Q psy4756 12 YYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 80 (125)
Q Consensus 12 pGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~ 80 (125)
+|++++|+.|.+..+.|.|.++ |.- .-...|...|+++.-.-++ .+|.|.|.|-|.
T Consensus 24 ~~~~~kdv~V~i~~~~l~v~~~--------g~~----~~~~~L~~~I~~e~S~w~i-~~~kv~i~L~K~ 79 (131)
T 2o30_A 24 GDADSSAIKIRMVGKKICVKNQ--------GEI----VIDGELLHEVDVSSLWWVI-NGDVVDVNVTKK 79 (131)
T ss_dssp ---CCSCEEEEEETTEEEEEET--------TEE----EEEEEBSSCEEEEEEEEEE-ETTEEEEEEEES
T ss_pred CCCCccceEEEEECCEEEEEEC--------CEe----eEccccccccccccCEEEE-eCCEEEEEEEEC
Confidence 5889999999999999999863 111 2235788889998888888 688899999998
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=91.54 E-value=0.65 Score=31.42 Aligned_cols=69 Identities=4% Similarity=-0.087 Sum_probs=52.0
Q ss_pred ecCceEE----ecCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEeC
Q psy4756 4 ETGQRGT----KYYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 79 (125)
Q Consensus 4 e~~~~ld----vpGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk 79 (125)
+|.+.+. +++. +++.|.+..+.|.+++.... . + ..|.-.+.|-..|+++.-+..+ .++.+.|+|.|
T Consensus 10 Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~---~-~---~~y~~~l~L~~~I~~e~S~~~v-~~~kiei~L~K 79 (125)
T 1ejf_A 10 DRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS---D-N---FKHLNEIDLFHCIDPNDSKHKR-TDRSILCCLRK 79 (125)
T ss_dssp ECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT---T-T---EEEEEEEEBSSCEEEEEEEEEE-CSSCEEEEEEE
T ss_pred eCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC---C-C---ceEEEEEEccceeccccCEEEE-CCCEEEEEEEE
Confidence 3444444 3664 79999999999999886421 1 1 2356778899999999999999 58889999999
Q ss_pred cCC
Q psy4756 80 RTL 82 (125)
Q Consensus 80 ~~~ 82 (125)
...
T Consensus 80 ~~~ 82 (125)
T 1ejf_A 80 GES 82 (125)
T ss_dssp SST
T ss_pred CCC
Confidence 864
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=90.09 E-value=0.56 Score=31.93 Aligned_cols=67 Identities=18% Similarity=0.140 Sum_probs=49.4
Q ss_pred ecCceEEe----c-C--cCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCC-EEEE
Q psy4756 4 ETGQRGTK----Y-Y--LDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLTI 75 (125)
Q Consensus 4 e~~~~ldv----p-G--f~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nG-vL~I 75 (125)
+|.+.+.+ | | ++++|+.|.+..+.|.|..+.. .-++ ...|...|+++.-.-++ .+| .|.|
T Consensus 14 Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----~~~~------~~~L~~~I~~e~s~w~i-~~~k~v~i 81 (131)
T 1wfi_A 14 QTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ-----PPVV------DGELYNEVKVEESSWLI-EDGKVVTV 81 (131)
T ss_dssp ECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS-----CCSB------CSCBSSCBCSTTCEEEE-ETTTEEEE
T ss_pred ecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCc-----eEEE------ecccccccccccCEEEE-cCCCEEEE
Confidence 34444443 5 6 8899999999999999986411 1111 33577889999888888 688 8999
Q ss_pred EEeCcCC
Q psy4756 76 TAPKRTL 82 (125)
Q Consensus 76 ~lPk~~~ 82 (125)
+|-|...
T Consensus 82 ~L~K~~~ 88 (131)
T 1wfi_A 82 HLEKINK 88 (131)
T ss_dssp EEEBSSS
T ss_pred EEEECCC
Confidence 9999864
No 25
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=89.89 E-value=0.21 Score=34.47 Aligned_cols=66 Identities=12% Similarity=0.113 Sum_probs=47.4
Q ss_pred cCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCE-EEEEEeCcCC
Q psy4756 12 YYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-LTITAPKRTL 82 (125)
Q Consensus 12 pGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGv-L~I~lPk~~~ 82 (125)
++. .++.|.+..+.|.|++...... ++.-...|.-.+.|...|+++..+..+ .++. |.|+|.|..+
T Consensus 32 ~~~--~~~~V~~~~~~l~~~~~~~~~~--g~~~~~~y~~~l~L~~~Idpe~S~~~v-~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 32 ADC--DAPELTIKPSYIELKAQSKPHV--GDENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFLKLYKKDL 98 (134)
T ss_dssp SSE--ESCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEEE-CCC--CEEEEEECSS
T ss_pred cCC--CceEEEEECCEEEEEEeccccc--CCccCceEEEEEEChhhccccccEEEE-CCCEEEEEEEEECCC
Confidence 665 4899999999999987643210 000013466778999999999999999 6888 9999999863
No 26
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=89.29 E-value=1.2 Score=31.40 Aligned_cols=58 Identities=14% Similarity=-0.009 Sum_probs=46.1
Q ss_pred cCcCCCCeEEEEECCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCE-EEEEEeCcCC
Q psy4756 12 YYLDKAEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-LTITAPKRTL 82 (125)
Q Consensus 12 pGf~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGv-L~I~lPk~~~ 82 (125)
+|++++||.|.+..+.|.|..+ |. . .-...|...|+++.-.-++ .+|. |.|.|-|...
T Consensus 33 ~~~~~kdv~V~i~~~~L~v~~k--------g~--~--~l~g~L~~~I~~eeS~w~i-~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 33 PGTRAQDIQCGLQSRHVALAVG--------GR--E--ILKGKLFDSTIADEGTWTL-EDRKMVRIVLTKTKR 91 (157)
T ss_dssp TTCCGGGEEEEECSSEEEEEET--------TE--E--EEEEEBSSCBCGGGCEEEE-ECCCEEEEEEEBSSC
T ss_pred CCCcccceEEEEecCEEEEEEC--------CE--E--EEeeccccccCccccEEEE-cCCcEEEEEEEEcCC
Confidence 3889999999999999999863 11 1 1345788999999988888 6775 9999999865
No 27
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=79.45 E-value=3.1 Score=26.03 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=28.1
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
.|.-.+.|| +++.+.|+-.+ .+|.|+|+.-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccc
Confidence 577889997 68999999999 79999999976643
No 28
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=78.13 E-value=3.4 Score=28.94 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=48.4
Q ss_pred ecCceEE----ecCcCCCCeEEEEE-CCEEEEEEEEceeeCCCceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEEEe
Q psy4756 4 ETGQRGT----KYYLDKAEISIKTV-DGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 4 e~~~~ld----vpGf~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lP 78 (125)
++...+. +++. +++.|.+. .+.|.|++. .. .+ ..|.-.+.|=..|+++ -+..+ ....+.|+|.
T Consensus 11 Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~~----~~---~~y~~~l~L~~~Idpe-S~~~v-~~~kIei~L~ 78 (150)
T 2kmw_A 11 QRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-GA----QG---ERFEFSLELYGKIMTE-YRKNV-GLRNIIFSIQ 78 (150)
T ss_dssp ECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-TT----TT---EEEEEEEEBSSCEEEE-EEEEE-ESSSEEEEEE
T ss_pred eCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-cC----CC---ceEEEEeEhhhccccc-ceEEe-cCCEEEEEEE
Confidence 3444444 3765 57888888 789999987 11 12 2456777898899999 77887 5788999998
Q ss_pred CcCC
Q psy4756 79 KRTL 82 (125)
Q Consensus 79 k~~~ 82 (125)
|...
T Consensus 79 K~e~ 82 (150)
T 2kmw_A 79 KEER 82 (150)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8764
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=77.12 E-value=3.6 Score=25.89 Aligned_cols=33 Identities=9% Similarity=0.180 Sum_probs=28.1
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRT 81 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~ 81 (125)
.|.-.+.|| +++.+.|+-.+ .+|.|+|++-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 467788998 89999999999 7999999997653
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=76.18 E-value=4.6 Score=25.63 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=28.6
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
.|.-.+.|| +++.++|+-.+ .+|.|+|+.-+...
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQM-DKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEE-ETTEEEEEEEECCG
T ss_pred EEEEEEECC-CCCHHHEEEEE-ECCEEEEEEEEcCc
Confidence 467788998 68999999999 79999999876643
No 31
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=75.81 E-value=4 Score=26.35 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=28.4
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRT 81 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~ 81 (125)
.|.-.+.|| +++.+.|+-.+ .+|.|+|+.-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 366789998 89999999999 7999999997754
No 32
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=75.71 E-value=4.5 Score=26.00 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=28.0
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCc
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 80 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~ 80 (125)
.|.-.+.|| +++.+.|+-.+ .+|.|+|+.-+.
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~ 48 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAE-DGGQLTVSGERP 48 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEE-ETTEEEEEEEEC
T ss_pred EEEEEEECC-CCchHhEEEEE-ECCEEEEEEEEe
Confidence 577889998 78999999999 799999998764
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=74.46 E-value=4.9 Score=26.15 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=27.8
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCc
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 80 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~ 80 (125)
.|.-.+.|| +++.+.|+-.+ .+|.|+|+.-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKV-QEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEc
Confidence 577889997 79999999999 799999999654
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=70.20 E-value=9.6 Score=25.17 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCccCCcEEEeCCC-CEEEEEEeCcCC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSD-GVLTITAPKRTL 82 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~n-GvL~I~lPk~~~ 82 (125)
.|.-.+.|| +++.+.|+-.+ .+ |.|+|++-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARV-SGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEecc
Confidence 577788998 68999999999 68 999999987654
No 35
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=61.66 E-value=16 Score=24.77 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=22.8
Q ss_pred CcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 62 KVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
.|.-.++.||+|.|++--.... +...|.|...
T Consensus 101 eVtf~iD~nGiL~V~a~d~~tg---~~~~i~i~~~ 132 (135)
T 1q5l_A 101 EVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 132 (135)
T ss_dssp EEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEECCCCEEEEEEEECCCC---CEEEEEEecC
Confidence 3566677999999999644433 5677888754
No 36
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=61.43 E-value=14 Score=25.52 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
.|.-.+.|| +++.++|+..+ .+|.|+|+.-+...
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~-~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNA-VGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEE-ETTEEEEEEECCCC
T ss_pred EEEEEEECC-CCChHhEEEEE-ECCEEEEEEEEccc
Confidence 577788997 58999999999 79999999987763
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=59.62 E-value=11 Score=26.98 Aligned_cols=33 Identities=9% Similarity=0.180 Sum_probs=28.7
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRT 81 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~ 81 (125)
.|.-.+.|| +++.+.|+..+ .+|.|+|+.-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 678889997 89999999999 7999999986643
No 38
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=56.48 E-value=21 Score=24.50 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=28.5
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
.|.-.+.|| +++.+.|+..+..++.|+|+.-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 577789998 78999999999335799999977654
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=53.09 E-value=12 Score=24.37 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=16.9
Q ss_pred CCCeEEEEECCEEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGKH 34 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~~ 34 (125)
|+.++|.++++.|+|+|.+
T Consensus 20 P~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETTEEEEEETT
T ss_pred CCCCEEEEeCCEEEEECCC
Confidence 6889999999999999863
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=51.45 E-value=27 Score=25.96 Aligned_cols=19 Identities=21% Similarity=0.506 Sum_probs=16.1
Q ss_pred CCCeEEEEECCEEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGKH 34 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~~ 34 (125)
|+.++|+++++.|+|+|.+
T Consensus 39 P~gV~V~i~~~~VtVKGPk 57 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK 57 (212)
T ss_pred CCCcEEEEeCCEEEEECCC
Confidence 5788999999999999863
No 41
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=50.99 E-value=28 Score=24.00 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=24.0
Q ss_pred CCcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 61 EKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 61 d~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
=.|.-.++.||+|.|++--.... ....|.|...
T Consensus 83 IeVtf~iD~nGiL~Vsa~d~~tg---~~~~i~I~~~ 115 (151)
T 3dqg_A 83 VEVTFDIDANGIVNVSARDRGTG---KEQQIVIQSS 115 (151)
T ss_dssp EEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEEeccCcEEEEEEEEccCC---CEeEEEEecC
Confidence 34666777999999999755433 5677888855
No 42
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=50.25 E-value=16 Score=23.42 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=18.2
Q ss_pred cCCCCeEEEEECCEEEEEEEEce
Q psy4756 14 LDKAEISIKTVDGFILVEGKHEE 36 (125)
Q Consensus 14 f~~edI~V~v~~~~L~I~g~~~~ 36 (125)
+.-+||.|.++++.++|+|+-+.
T Consensus 74 lgyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 74 LGYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp TTCCEEEEEEETTEEEEEEEC--
T ss_pred hCCcceeEEEcCCeEEEEeEEcC
Confidence 34579999999999999998653
No 43
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=46.67 E-value=30 Score=23.77 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=23.5
Q ss_pred CcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 62 KVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
.|.-.++.||+|.|++--.... ....|.|...
T Consensus 84 ~Vtf~iD~nGiL~V~a~d~~tg---~~~~i~I~~~ 115 (152)
T 3h0x_A 84 EVTFALDANGILKVSATDKGTG---KSESITITND 115 (152)
T ss_dssp EEEEEECTTSEEEEEEEETTTC---CEEEEEEECC
T ss_pred EEEEEEcCCCEEEEEEEEcCCC---cEeEEEEecC
Confidence 4666777999999999755443 5677888854
No 44
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=45.04 E-value=16 Score=21.39 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=18.8
Q ss_pred CCCCeEEEEECCEEEEEEEEce
Q psy4756 15 DKAEISIKTVDGFILVEGKHEE 36 (125)
Q Consensus 15 ~~edI~V~v~~~~L~I~g~~~~ 36 (125)
.-+||.|.-+++.++|+|+-+.
T Consensus 31 gyndinvtwdgdtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDGDTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECSSCEEEEEECCC
T ss_pred CcccceeEEcCCEEEEEeEEcC
Confidence 4579999999999999998654
No 45
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=44.36 E-value=13 Score=22.95 Aligned_cols=26 Identities=23% Similarity=0.475 Sum_probs=22.6
Q ss_pred EEecCcCCCCeEEEEECCEEEEEEEE
Q psy4756 9 GTKYYLDKAEISIKTVDGFILVEGKH 34 (125)
Q Consensus 9 ldvpGf~~edI~V~v~~~~L~I~g~~ 34 (125)
.+|-.|+.+.|.+....+.|.|+|+.
T Consensus 13 ~~V~sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 13 SKVQSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEEEEECSSEEEEEETTEEEEEEEEC
T ss_pred cCEEEECCCEEEEEeCceEEEEEcCC
Confidence 34566999999999999999999984
No 46
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=41.93 E-value=28 Score=24.02 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=23.6
Q ss_pred CCcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 61 EKVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 61 d~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
=.|.-.++.||+|.|++--.... ....|.|...
T Consensus 83 IeVtf~iD~nGiL~Vsa~d~~tg---~~~~i~I~~~ 115 (152)
T 3dob_A 83 IEVTFNIDANGILNVSAEDKSTG---KSNRITIQNE 115 (152)
T ss_dssp EEEEEEECTTCCEEEEEEETTTC---CEEEEEECCC
T ss_pred EEEEEEeCCCCeEEEEEEEcCCC---CEEEEEEEcC
Confidence 34666777999999999755433 5677888754
No 47
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=37.93 E-value=39 Score=24.12 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=23.2
Q ss_pred CcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 62 KVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
.|+-.++.||+|.|++--.... ....|.|...
T Consensus 104 eVtf~iD~nGiL~VsA~d~~tg---~~~~i~I~~~ 135 (182)
T 3n8e_A 104 EVTFDIDANGIVHVSAKDKGTG---REQQIVIQSS 135 (182)
T ss_dssp EEEEEECTTCCEEEEEEETTTC---CEEEEEESCC
T ss_pred EEEEEEecCCEEEEEEEEcCCC---CEeeEEEecC
Confidence 4666677999999998755443 5667888754
No 48
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=36.27 E-value=92 Score=20.56 Aligned_cols=30 Identities=3% Similarity=0.193 Sum_probs=23.0
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEE
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 77 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~l 77 (125)
...-.|.||.+++.+.+.+.+ ....|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i-~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRM-VGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEE-ETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEE-ECCEEEEEE
Confidence 567789999999999999999 688888876
No 49
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=36.02 E-value=34 Score=23.27 Aligned_cols=15 Identities=40% Similarity=0.640 Sum_probs=13.6
Q ss_pred cEEEeCCCCEEEEEEe
Q psy4756 63 VTSSLSSDGVLTITAP 78 (125)
Q Consensus 63 i~A~~~~nGvL~I~lP 78 (125)
+.+.+ .+|||+|+++
T Consensus 49 ~Dve~-~~gVLti~f~ 63 (123)
T 3oeq_A 49 PDVEL-SHGVMTLEIP 63 (123)
T ss_dssp CEEEE-CSSEEEEECT
T ss_pred eEEEc-cCCEEEEEEC
Confidence 78999 7999999996
No 50
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=35.50 E-value=41 Score=22.79 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=22.0
Q ss_pred CcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 62 KVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
.|.-.++.||+|.|++--.... ....|.|...
T Consensus 84 ~V~f~id~nGiL~V~a~d~~tg---~~~~i~i~~~ 115 (152)
T 2op6_A 84 EVTFEIDVNGILHVSAEDKGTG---NKNKLTITND 115 (152)
T ss_dssp EEEEEECTTSCEEEEEEETTTC---CEEEEEECSS
T ss_pred EEEEEECCCcEEEEEEEEecCC---cEEEEEeecc
Confidence 3566677999999998643332 4567888644
No 51
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=34.43 E-value=41 Score=24.59 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=23.1
Q ss_pred CcEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 62 KVTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
.|.-.++.||+|.|++--.... ....|.|...
T Consensus 85 eVtf~iD~nGiL~V~a~d~~tg---~~~~i~I~~~ 116 (219)
T 4e81_A 85 EVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 116 (219)
T ss_dssp EEEEEECTTCCEEEEEEETTTC---CEEEEEECTT
T ss_pred EEEEEeCCCCCEeeeeeccccC---ccceEeeecc
Confidence 4666677999999999765543 5677888643
No 52
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=33.65 E-value=24 Score=23.17 Aligned_cols=16 Identities=38% Similarity=0.582 Sum_probs=14.0
Q ss_pred CcEEEeCCCCEEEEEEe
Q psy4756 62 KVTSSLSSDGVLTITAP 78 (125)
Q Consensus 62 ~i~A~~~~nGvL~I~lP 78 (125)
.+.+.+ .+|||+|+++
T Consensus 29 d~D~e~-~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEI-NGGVLTITFE 44 (106)
T ss_dssp CCEEEE-ETTEEEEECT
T ss_pred CEeeec-cCCEEEEEEC
Confidence 488999 6999999986
No 53
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=30.54 E-value=53 Score=24.84 Aligned_cols=53 Identities=11% Similarity=0.032 Sum_probs=31.8
Q ss_pred CcCCCCeEEEEECCEEEEEEEEceee---CCCceEEEEEEEEEECCCCCccCCcEEEe
Q psy4756 13 YLDKAEISIKTVDGFILVEGKHEEKE---DEHGFISRQFKRRYLLPKDVEIEKVTSSL 67 (125)
Q Consensus 13 Gf~~edI~V~v~~~~L~I~g~~~~~~---~~~~~~~r~f~R~~~LP~~vd~d~i~A~~ 67 (125)
.+.++++.| +++.|+|++.+.... ....+.+..|+-+++||..-..--+.|.+
T Consensus 29 ~w~~~Nv~v--~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g~~~G~wpAfw 84 (274)
T 2uwa_A 29 LWGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFY 84 (274)
T ss_dssp EECGGGEEE--ETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCSCCTTEEEEEE
T ss_pred cCCCCCEEE--ECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCCCCCcEEEEEE
Confidence 356777766 788999998654211 11123445789999999752223344544
No 54
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=29.88 E-value=43 Score=24.00 Aligned_cols=18 Identities=17% Similarity=0.322 Sum_probs=15.8
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGK 33 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~ 33 (125)
|+.++|+++++.|+|+|.
T Consensus 11 P~gV~V~i~~~~VtVkGp 28 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGP 28 (177)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 678999999999999984
No 55
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=28.79 E-value=45 Score=24.12 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=16.5
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGK 33 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~ 33 (125)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGP 30 (188)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 789999999999999994
No 56
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=28.54 E-value=46 Score=24.15 Aligned_cols=18 Identities=11% Similarity=0.244 Sum_probs=16.1
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGK 33 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~ 33 (125)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGP 30 (191)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 688999999999999985
No 57
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=28.31 E-value=47 Score=23.86 Aligned_cols=18 Identities=22% Similarity=0.215 Sum_probs=15.8
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGK 33 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~ 33 (125)
|+.++|+++++.++|+|.
T Consensus 9 P~gV~v~i~~~~vtVkGp 26 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGD 26 (178)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 678999999999999984
No 58
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=28.23 E-value=47 Score=24.08 Aligned_cols=18 Identities=17% Similarity=0.397 Sum_probs=16.2
Q ss_pred CCCeEEEEECCEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGK 33 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~ 33 (125)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGP 30 (190)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 688999999999999995
No 59
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=27.69 E-value=38 Score=24.29 Aligned_cols=19 Identities=21% Similarity=0.401 Sum_probs=16.3
Q ss_pred CCCeEEEEECCEEEEEEEE
Q psy4756 16 KAEISIKTVDGFILVEGKH 34 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~~ 34 (125)
|+.++|+++++.|+|+|.+
T Consensus 12 P~gV~v~i~~~~v~VkGpk 30 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPK 30 (180)
T ss_dssp CTTCEEEEETTEEEEECSS
T ss_pred CCCcEEEEeCCEEEEEeCC
Confidence 6889999999999999853
No 60
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=26.89 E-value=51 Score=23.89 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=16.6
Q ss_pred CCCCeEEEEECCEEEEEEE
Q psy4756 15 DKAEISIKTVDGFILVEGK 33 (125)
Q Consensus 15 ~~edI~V~v~~~~L~I~g~ 33 (125)
=|+.++|+++++.++|+|.
T Consensus 12 IP~gV~V~i~~~~VtVkGp 30 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGP 30 (192)
T ss_dssp CCTTCEEEEETTEEEEEET
T ss_pred cCCCCEEEEeCCEEEEECC
Confidence 3688999999999999994
No 61
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.33 E-value=66 Score=23.17 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=21.4
Q ss_pred EEEEEECCCCCccCCcEEEeCCCCEEEEEEeCcCC
Q psy4756 48 FKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRTL 82 (125)
Q Consensus 48 f~R~~~LP~~vd~d~i~A~~~~nGvL~I~lPk~~~ 82 (125)
+++.+.+|++|+ +++ ++..++|.-|+-..
T Consensus 7 ~~~~I~IP~gV~-----v~i-~~~~V~VkGpkG~L 35 (184)
T 3j21_F 7 IREEVEIPEGVE-----VTV-EGYKVKVKGPKGEL 35 (184)
T ss_dssp CEEEEECCSSCE-----EEE-SSSEEEEECSSCEE
T ss_pred eeEEEeCCCCcE-----EEE-eCCEEEEEcCCeEE
Confidence 467899998776 567 67777777777644
No 62
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=25.27 E-value=1.4e+02 Score=20.56 Aligned_cols=30 Identities=7% Similarity=0.176 Sum_probs=26.2
Q ss_pred EEEEEEECCCCCccCCcEEEeCCCCEEEEEE
Q psy4756 47 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 77 (125)
Q Consensus 47 ~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~l 77 (125)
...-+|.||.++....|.+.+ ....|.|.+
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i-~~~~L~v~~ 53 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGL-QSRHVALAV 53 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEE-CSSEEEEEE
T ss_pred EEEEEEECCCCCcccceEEEE-ecCEEEEEE
Confidence 567789999999999999999 688888876
No 63
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=25.08 E-value=78 Score=22.98 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=21.1
Q ss_pred cEEEeCCCCEEEEEEeCcCCCCCCCCeEEeeeeC
Q psy4756 63 VTSSLSSDGVLTITAPKRTLQDKTTERPVPIVQT 96 (125)
Q Consensus 63 i~A~~~~nGvL~I~lPk~~~~~~~~~r~I~I~~~ 96 (125)
|.-.++.||+|.|++--... .....|+|...
T Consensus 83 Vtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 113 (227)
T 1u00_A 83 VTFQVDADGLLSVTAMEKST---GVEASIQVKPS 113 (227)
T ss_dssp EEEEECTTCCEEEEEEETTT---CCEEEEEECCC
T ss_pred EEEEECCCCcEEEEeecccc---cccceEEEEec
Confidence 55666799999999854333 24567777644
No 64
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.87 E-value=41 Score=22.59 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=21.3
Q ss_pred ecCcCCCCeEEEEECCEEEEEEEEc
Q psy4756 11 KYYLDKAEISIKTVDGFILVEGKHE 35 (125)
Q Consensus 11 vpGf~~edI~V~v~~~~L~I~g~~~ 35 (125)
.|..++-.|.|.++++.++++|.-.
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp 26 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFP 26 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEES
T ss_pred CCcccceeEEEEEECCEEEEEEECC
Confidence 3667788899999999999999854
No 65
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=23.65 E-value=1.6e+02 Score=19.15 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=26.6
Q ss_pred EEEEEEECCCCC-ccCCcEEEeCCCCEEEEEEe
Q psy4756 47 QFKRRYLLPKDV-EIEKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 47 ~f~R~~~LP~~v-d~d~i~A~~~~nGvL~I~lP 78 (125)
...-.|.||.++ +.+++.+.+ ....|.|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i-~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVAL-SSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEE-CSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEE-EcCEEEEEEE
Confidence 567789999988 999999999 6888888873
No 66
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.03 E-value=52 Score=22.41 Aligned_cols=17 Identities=35% Similarity=0.472 Sum_probs=14.5
Q ss_pred CCcEEEeCCCCEEEEEEe
Q psy4756 61 EKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 61 d~i~A~~~~nGvL~I~lP 78 (125)
..+.+.+ .+|||+|+++
T Consensus 40 ~d~D~e~-~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSF-GSGVLTVKLG 56 (129)
T ss_dssp TTCEEEE-ETTEEEEECC
T ss_pred cceeeec-CCCEEEEEEc
Confidence 4578999 6999999985
No 67
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=21.03 E-value=31 Score=21.64 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=20.4
Q ss_pred CceEEEEEEEEEECCCCCccCCcEEEeCCCCEEEEE
Q psy4756 41 HGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT 76 (125)
Q Consensus 41 ~~~~~r~f~R~~~LP~~vd~d~i~A~~~~nGvL~I~ 76 (125)
.+++-+.|.+.-+. -.+-+|.| ++|||.|.
T Consensus 32 ~n~vlC~ydKV~R~-----KnkWKc~L-KdGim~in 61 (76)
T 1nvp_C 32 ENVVVCQYDKIHRS-----KNKWKFHL-KDGIMNLN 61 (76)
T ss_dssp CCEEEEEEEEEEEE-----TTEEEEEE-EEEEEEET
T ss_pred CcEEEEEEEEEecc-----CceEEEEE-eccEEEEC
Confidence 34555666554443 44679999 99999974
No 68
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=20.49 E-value=1.6e+02 Score=21.52 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=25.0
Q ss_pred CCCeEEEEECCEEEEEEEEceeeC------------CCceEEEEEEEEEECCCC
Q psy4756 16 KAEISIKTVDGFILVEGKHEEKED------------EHGFISRQFKRRYLLPKD 57 (125)
Q Consensus 16 ~edI~V~v~~~~L~I~g~~~~~~~------------~~~~~~r~f~R~~~LP~~ 57 (125)
+++ |.++++.|+|++.++...+ ...+.+..|+-+++||..
T Consensus 46 ~~n--v~v~~G~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 46 IEN--ARVGGGVLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp TTT--EEEETTEEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred CcC--EEEECCEEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 555 5567999999997763110 111223368888899864
No 69
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=20.37 E-value=67 Score=19.70 Aligned_cols=17 Identities=12% Similarity=0.237 Sum_probs=12.9
Q ss_pred CCcEEEeCCCCEEEEEEe
Q psy4756 61 EKVTSSLSSDGVLTITAP 78 (125)
Q Consensus 61 d~i~A~~~~nGvL~I~lP 78 (125)
..|.|.| +||+|.--=|
T Consensus 3 k~IeAiY-EnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVY-ENGVFKPLQK 19 (69)
T ss_dssp CCEEEEE-ETTEEEESSC
T ss_pred ceEEEEE-ECCEEeECCc
Confidence 3589999 8999975433
Done!