Query psy4757
Match_columns 169
No_of_seqs 234 out of 1154
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:55:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvt_A Potassium channel prote 100.0 7.5E-43 2.6E-47 253.5 9.9 112 1-112 1-112 (115)
2 1nn7_A Potassium channel KV4.2 100.0 1.6E-38 5.4E-43 227.4 7.0 102 6-108 1-102 (105)
3 2nz0_B Potassium voltage-gated 100.0 6.3E-38 2.1E-42 234.6 8.5 107 2-109 32-138 (140)
4 1s1g_A Potassium voltage-gated 100.0 6.7E-38 2.3E-42 230.2 6.9 106 3-109 11-116 (124)
5 1t1d_A Protein (potassium chan 100.0 2.5E-36 8.4E-41 214.2 7.4 93 5-97 1-94 (100)
6 2r9r_B Paddle chimera voltage 100.0 9.2E-34 3.1E-38 250.4 7.0 131 4-169 51-182 (514)
7 3drz_A BTB/POZ domain-containi 100.0 8.6E-32 2.9E-36 192.9 8.8 91 2-92 3-96 (107)
8 3drx_A BTB/POZ domain-containi 100.0 5.2E-31 1.8E-35 207.1 6.5 98 3-102 10-110 (202)
9 3ga1_A Nucleus accumbens-assoc 97.9 3.3E-05 1.1E-09 55.3 6.5 85 6-98 35-121 (129)
10 3ohu_A Transcription regulator 97.6 0.00014 4.8E-09 51.5 6.9 87 6-98 34-122 (125)
11 1r29_A B-cell lymphoma 6 prote 97.6 0.00018 6.2E-09 51.0 7.3 82 6-91 31-114 (127)
12 2vpk_A Myoneurin; transcriptio 97.6 0.0002 6.9E-09 50.0 6.8 79 6-91 24-105 (116)
13 2ihc_A Transcription regulator 97.6 0.00013 4.6E-09 51.7 5.9 87 6-98 31-119 (124)
14 2yy9_A Zinc finger and BTB dom 97.4 0.0001 3.5E-09 53.2 3.1 79 6-91 27-106 (135)
15 2ppi_A Gigaxonin; BTB domain, 97.3 0.00019 6.4E-09 52.5 4.0 84 6-91 49-134 (144)
16 2z8h_A Transcription regulator 97.3 0.00039 1.3E-08 50.2 5.6 86 6-97 38-125 (138)
17 2q81_A MIZ-1 protein; BTB/POZ 97.2 0.00014 4.9E-09 51.2 2.5 79 6-92 29-108 (119)
18 3b84_A Zinc finger and BTB dom 97.2 0.00084 2.9E-08 47.1 6.5 79 6-91 26-105 (119)
19 3htm_A Speckle-type POZ protei 97.1 0.00088 3E-08 49.4 6.3 83 6-91 36-119 (172)
20 2vkp_A BTB/POZ domain-containi 97.1 0.0014 4.8E-08 44.9 6.8 82 6-91 10-96 (109)
21 2if5_A Zinc finger and BTB dom 97.1 0.001 3.5E-08 46.5 5.7 83 6-91 27-110 (120)
22 3m5b_A Zinc finger and BTB dom 97.1 0.00032 1.1E-08 49.7 2.9 80 6-98 32-112 (119)
23 1buo_A POZ domain, protein (pr 97.0 0.0016 5.6E-08 45.7 6.0 78 6-91 30-108 (121)
24 3fkc_A Transcriptional regulat 96.9 0.0013 4.4E-08 46.1 5.3 78 6-91 33-112 (116)
25 4eoz_A Speckle-type POZ protei 96.9 0.00072 2.5E-08 48.5 3.9 83 6-91 27-110 (145)
26 3hve_A Gigaxonin; ubiquitin, c 96.8 0.00081 2.8E-08 53.1 3.8 84 6-91 33-118 (256)
27 3i3n_A Kelch-like protein 11; 96.2 0.0058 2E-07 48.8 5.3 83 6-91 34-126 (279)
28 3hqi_A Speckle-type POZ protei 95.6 0.012 4E-07 47.7 4.7 84 5-91 175-259 (312)
29 2ast_A S-phase kinase-associat 90.0 0.15 5.2E-06 37.6 2.3 90 7-99 3-120 (159)
30 1fs1_B SKP1, cyclin A/CDK2-ass 67.1 1.5 5.1E-05 31.5 0.6 85 7-99 4-115 (141)
31 2p1m_A SKP1-like protein 1A; F 61.3 0.58 2E-05 34.5 -2.6 88 5-99 4-119 (160)
32 4ajy_C Transcription elongatio 50.0 24 0.00081 23.2 4.3 57 7-65 4-63 (97)
33 1t3u_A Conserved hypothetical 49.0 11 0.00038 25.3 2.5 19 1-19 1-19 (104)
34 1hv2_A Elongin C, ELC1; protei 48.5 40 0.0014 22.3 5.3 61 1-66 1-63 (99)
35 3v7d_A Suppressor of kinetocho 45.0 8.1 0.00028 28.5 1.4 95 1-99 4-127 (169)
36 3hnw_A Uncharacterized protein 31.0 30 0.001 24.7 2.5 19 1-19 4-22 (138)
37 3h3g_B Parathyroid hormone-rel 21.4 42 0.0014 16.8 1.2 9 149-157 5-13 (24)
No 1
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=100.00 E-value=7.5e-43 Score=253.53 Aligned_cols=112 Identities=86% Similarity=1.492 Sum_probs=100.2
Q ss_pred CCCCCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChhHH
Q psy4757 1 MDGEHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGPLF 80 (169)
Q Consensus 1 ~~~~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~ 80 (169)
|+++++|+|||||++|+|+++||+++|+|+|++|++....+++++|+|||||||.+|++||||||+|+|++|.+++...|
T Consensus 1 m~~~~~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p~~~~~~~~ 80 (115)
T 3kvt_A 1 MDAENRVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPTDVCGPLF 80 (115)
T ss_dssp ---CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCSSSCHHHH
T ss_pred CCCCCEEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCCCCCcccHHHH
Confidence 89999999999999999999999999999999999876678889999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCcCcCcccccccccccchHHHH
Q psy4757 81 EEELEFWGLDSNQVEPCCWSTYSIHRDTQTTL 112 (169)
Q Consensus 81 ~~E~~f~~l~~~~l~~CC~~~~~~~~~~~~~~ 112 (169)
.+||+||+|++..++.||+..|++++++.+++
T Consensus 81 ~~Ea~fy~i~~~~l~~CC~~~~~~~~~~~~~~ 112 (115)
T 3kvt_A 81 EEELEFWGLDSNQVEPCCWMTYTAHRDTQETL 112 (115)
T ss_dssp HHHHHHHTCCGGGBCGGGSHHHHSCC------
T ss_pred HHHHHHhCCChHHHHHHHHHHHHhccchhhhh
Confidence 99999999999999999999999999875544
No 2
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=100.00 E-value=1.6e-38 Score=227.40 Aligned_cols=102 Identities=44% Similarity=0.866 Sum_probs=94.4
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEELE 85 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~~ 85 (169)
+|+|||||++|+|+++||+++|+|+|++. .....+++++++|||||||.+|++||||||+|+|++|.+++...|.+||+
T Consensus 1 ~V~LNVGG~~f~t~~~TL~~~p~s~L~~~-~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~ 79 (105)
T 1nn7_A 1 LIVLNVSGTRFQTWQDTLERYPDTLLGSS-ERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHECISAYDEELA 79 (105)
T ss_dssp CEEEEETTEEEEECHHHHHTSCSSSTTSG-GGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHH
T ss_pred CEEEEECCEEEEEeHHHHhcCCCcccccc-CCcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHH
Confidence 58999999999999999999999999994 33345678899999999999999999999999999999999999999999
Q ss_pred HhCCCCcCcCcccccccccccch
Q psy4757 86 FWGLDSNQVEPCCWSTYSIHRDT 108 (169)
Q Consensus 86 f~~l~~~~l~~CC~~~~~~~~~~ 108 (169)
||+|++..++.||+..|.+++++
T Consensus 80 fy~i~~l~~~~cc~~~~~~~~~~ 102 (105)
T 1nn7_A 80 FFGLIPEIIGDCCYEEYKDRRRE 102 (105)
T ss_dssp HHTCCSCCBCHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999887765
No 3
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=100.00 E-value=6.3e-38 Score=234.61 Aligned_cols=107 Identities=39% Similarity=0.792 Sum_probs=97.5
Q ss_pred CCCCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChhHHH
Q psy4757 2 DGEHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGPLFE 81 (169)
Q Consensus 2 ~~~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~ 81 (169)
..+++|+|||||++|+|+++||+++|+|+|++ ......+++++++|||||||.+|++||||||+|+|++|.+++...|.
T Consensus 32 ~~~~~V~LNVGG~~F~T~~~TL~~~P~S~L~~-~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 110 (140)
T 2nz0_B 32 RQDELIVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYD 110 (140)
T ss_dssp TCCCEEEEEETTEEEEEEHHHHHTCTTSTTTS-GGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCCTTSCHHHHH
T ss_pred CCCCEEEEEECCEEEEeeHHHHhcCCCeeecc-cCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCCCCcCHHHHH
Confidence 46789999999999999999999999999999 33344678899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcCcCcccccccccccchH
Q psy4757 82 EELEFWGLDSNQVEPCCWSTYSIHRDTQ 109 (169)
Q Consensus 82 ~E~~f~~l~~~~l~~CC~~~~~~~~~~~ 109 (169)
+||+||+|++..++.||+..|.+++++.
T Consensus 111 eEa~fy~i~~l~l~~CC~~~~~~~~~e~ 138 (140)
T 2nz0_B 111 DELAFYGILPEIIGDCCYEEYKDRKREN 138 (140)
T ss_dssp HHHHHHTCCGGGBCTTTHHHHHHHTC--
T ss_pred HHHHHcCCChHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998887753
No 4
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=100.00 E-value=6.7e-38 Score=230.18 Aligned_cols=106 Identities=40% Similarity=0.800 Sum_probs=97.1
Q ss_pred CCCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChhHHHH
Q psy4757 3 GEHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGPLFEE 82 (169)
Q Consensus 3 ~~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~ 82 (169)
.+++|+|||||++|+|+++||+++|+|+|++ ......+++++++|||||||.+|++||||||+|+|++|.+++...|.+
T Consensus 11 ~~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~-~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 11 QDELIVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSTTSSTTS-SGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred CCCEEEEEeCCEEEEEeHHHHhcCCCceecc-cCCcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 5689999999999999999999999999998 333346788999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCcCcCcccccccccccchH
Q psy4757 83 ELEFWGLDSNQVEPCCWSTYSIHRDTQ 109 (169)
Q Consensus 83 E~~f~~l~~~~l~~CC~~~~~~~~~~~ 109 (169)
||+||+|.+..++.||+..|.+++++.
T Consensus 90 Ea~fy~i~~l~l~~cC~~~~~~~~~~~ 116 (124)
T 1s1g_A 90 ELAFYGILPEIIGDCCYEEYKDRKREN 116 (124)
T ss_dssp HHHHTTCCGGGBCHHHHHHHHHHHHHH
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999998887754
No 5
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=100.00 E-value=2.5e-36 Score=214.20 Aligned_cols=93 Identities=41% Similarity=0.730 Sum_probs=87.8
Q ss_pred CeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhc-CcccCCCCCChhHHHHH
Q psy4757 5 HRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRT-GKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 5 ~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~-g~l~~p~~~~~~~~~~E 83 (169)
++|+|||||++|+|+++||+++|+|+|++++++...+++++++|||||||.+|++||||||+ |+|++|.++|...|.+|
T Consensus 1 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~E 80 (100)
T 1t1d_A 1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEE 80 (100)
T ss_dssp CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHH
Confidence 47999999999999999999999999999998777888999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCcCcCcc
Q psy4757 84 LEFWGLDSNQVEPC 97 (169)
Q Consensus 84 ~~f~~l~~~~l~~C 97 (169)
|+||+|++..++.|
T Consensus 81 a~fy~i~~~~~~~~ 94 (100)
T 1t1d_A 81 IKFYELGENAFERY 94 (100)
T ss_dssp HHHTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 99999998777654
No 6
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=100.00 E-value=9.2e-34 Score=250.42 Aligned_cols=131 Identities=34% Similarity=0.590 Sum_probs=108.9
Q ss_pred CCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEecCCCCcHHHHHHhhhc-CcccCCCCCChhHHHH
Q psy4757 4 EHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQILNYYRT-GKLHYPTNVCGPLFEE 82 (169)
Q Consensus 4 ~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~DRdp~~F~~IL~ylr~-g~l~~p~~~~~~~~~~ 82 (169)
+++|+|||||++|+|+++||+++|+|+|+++..++..+++++++|||||||.+|++||||||+ |+|++|.++|...|.+
T Consensus 51 ~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~ 130 (514)
T 2r9r_B 51 SERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSE 130 (514)
T ss_dssp CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEECSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHH
T ss_pred CCEEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEcCChHHHHHHHHHHhcCCccccCCcccHHHHHH
Confidence 579999999999999999999999999999998878899999999999999999999999999 9999999999999999
Q ss_pred HHHHhCCCCcCcCcccccccccccchHHHHHHhhhcccccCCCcHHHHHHhhCcchhhhccchhHHhhhHHHHHccccCC
Q psy4757 83 ELEFWGLDSNQVEPCCWSTYSIHRDTQTTLAILDKLDIDAEKPTEEEIARMFGYEDAYLEDSLNAWQRLKPKVWSLFDEP 162 (169)
Q Consensus 83 E~~f~~l~~~~l~~CC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~iW~~~E~P 162 (169)
||+||||++..++.|. ..+....+.+. ...++++|+++|.++|+|
T Consensus 131 E~~f~~i~~~~~~~~~---------------~~e~~~~~~~~--------------------~~p~~~~r~~lw~l~e~p 175 (514)
T 2r9r_B 131 EIRFYELGEEAMEMFR---------------EDEGYIKEEER--------------------PLPENEFQRQVWLLFEYP 175 (514)
T ss_dssp HHHHTTCCHHHHHHHH---------------HHTTCCCCCCC--------------------CCCSCSSHHHHHHTTTCT
T ss_pred HHHhcCCCHHHHhhhh---------------hhhhccccccc--------------------cCchHHHHHHHHHHhcCC
Confidence 9999999886554321 01110000000 012368999999999999
Q ss_pred CCCCCCC
Q psy4757 163 YSSLGAK 169 (169)
Q Consensus 163 ~sS~~Ak 169 (169)
.||.+||
T Consensus 176 ~sS~~a~ 182 (514)
T 2r9r_B 176 ESSGPAR 182 (514)
T ss_dssp TSCHHHH
T ss_pred CCcHHHH
Confidence 9997664
No 7
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=99.97 E-value=8.6e-32 Score=192.86 Aligned_cols=91 Identities=33% Similarity=0.468 Sum_probs=81.2
Q ss_pred CCCCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCC---CCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChh
Q psy4757 2 DGEHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANY---DPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGP 78 (169)
Q Consensus 2 ~~~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~---~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~ 78 (169)
+.+++|+|||||++|+|+++||+++|+|+|++|++....+ .+++++|||||||.+|++||||||+|+|++|.++|..
T Consensus 3 ~~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 3 SVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp --CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred CCCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 3578999999999999999999999999999998753222 2378999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCc
Q psy4757 79 LFEEELEFWGLDSN 92 (169)
Q Consensus 79 ~~~~E~~f~~l~~~ 92 (169)
.|.+||+||+|++.
T Consensus 83 ~l~~Ea~fy~l~~L 96 (107)
T 3drz_A 83 GVLEEAEFYNITSL 96 (107)
T ss_dssp HHHHHHHHHTCHHH
T ss_pred HHHHHHHHCCCHHH
Confidence 99999999999873
No 8
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=99.96 E-value=5.2e-31 Score=207.09 Aligned_cols=98 Identities=31% Similarity=0.421 Sum_probs=85.7
Q ss_pred CCCeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCC---CCCCceEEecCCCCcHHHHHHhhhcCcccCCCCCChhH
Q psy4757 3 GEHRIILNVGGIRYETYKATLKKIPATRLSRLTEALANY---DPILNEYFFDRHPGVFAQILNYYRTGKLHYPTNVCGPL 79 (169)
Q Consensus 3 ~~~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~---~~~~~e~f~DRdp~~F~~IL~ylr~g~l~~p~~~~~~~ 79 (169)
.+++|+|||||++|+|+++||.++|+|+|++|++....+ .+++++|||||||.+|++||||||+|+|++|.++|...
T Consensus 10 ~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 10 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp CCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred CCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 568999999999999999999999999999998754332 23689999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcCcCccccccc
Q psy4757 80 FEEELEFWGLDSNQVEPCCWSTY 102 (169)
Q Consensus 80 ~~~E~~f~~l~~~~l~~CC~~~~ 102 (169)
|.+||+||+|.+ +..||....
T Consensus 90 l~eEA~FygL~~--Lv~~l~~~i 110 (202)
T 3drx_A 90 VLEEAEFYNITS--LIKLVKDKI 110 (202)
T ss_dssp HHHHHHHTTCHH--HHHHHHHHH
T ss_pred HHHHHHHCCcHH--HHHHHHHHH
Confidence 999999999986 445555443
No 9
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.86 E-value=3.3e-05 Score=55.25 Aligned_cols=85 Identities=19% Similarity=0.212 Sum_probs=67.3
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe--cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF--DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~--DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+... ...++.+ |-++..|..||+|+-+|++.++.+ ....+..-
T Consensus 35 Dv~l~v~~~~~~~Hk~vLaa~S-~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~-~~~~ll~~ 107 (129)
T 3ga1_A 35 DVSVVVKGHAFKAHRAVLAASS-SYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVG-DQDLLMYT 107 (129)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTT-THHHHHHH
T ss_pred ceEEEECCEEEEehHHHHHHcC-HHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHH
Confidence 4789999999999999998754 3567777643 5677888 578999999999999999987654 46788899
Q ss_pred HHHhCCCCcCcCccc
Q psy4757 84 LEFWGLDSNQVEPCC 98 (169)
Q Consensus 84 ~~f~~l~~~~l~~CC 98 (169)
|.+|+|+.. .+.|+
T Consensus 108 A~~~~i~~l-~~~C~ 121 (129)
T 3ga1_A 108 AGFLQIQEI-MEKGT 121 (129)
T ss_dssp HHHTTBTTS-SCC--
T ss_pred HHHhCCHHH-HHHHH
Confidence 999999874 44554
No 10
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.64 E-value=0.00014 Score=51.48 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=67.0
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEec--CCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFD--RHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~D--Rdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+.... .+..++-+. -++..|..||+|+-+|++.++.+ ....+..-
T Consensus 34 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~---~e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~-~v~~ll~~ 108 (125)
T 3ohu_A 34 DVTLIVERKEFRAHRAVLAACS-EYFWQALVGQT---KNDLVVSLPEEVTARGFGPLLQFAYTAKLLLSRE-NIREVIRC 108 (125)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHTTCC---CSSCEEECCTTCCHHHHHHHHHHHTTSEEEECTT-THHHHHHH
T ss_pred ceEEEECCEEEechHHHHHHcC-HHHHHHhcCCC---CCCcEEEeCCCCCHHHHHHHHHhHcCCceEECHH-HHHHHHHH
Confidence 4788999999999999998754 35667776431 235567663 68999999999999999987553 46788899
Q ss_pred HHHhCCCCcCcCccc
Q psy4757 84 LEFWGLDSNQVEPCC 98 (169)
Q Consensus 84 ~~f~~l~~~~l~~CC 98 (169)
|.+|+|+.. .+.|+
T Consensus 109 A~~l~i~~L-~~~C~ 122 (125)
T 3ohu_A 109 AEFLRMHNL-EDSCF 122 (125)
T ss_dssp HHHHTBSSC-TTSSC
T ss_pred HHHhCCHHH-HHHHH
Confidence 999999874 45554
No 11
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=97.63 E-value=0.00018 Score=51.05 Aligned_cols=82 Identities=11% Similarity=0.144 Sum_probs=65.5
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe--cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF--DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~--DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+.... ......+-+ |-++..|..+|+|+-+|++.++.+ ....+..-
T Consensus 31 Dv~l~v~~~~~~aHk~iLaa~S-~~F~~~f~~~~--~e~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~-~~~~ll~~ 106 (127)
T 1r29_A 31 DVVIVVSREQFRAHKTVLMACS-GLFYSIFTDQL--KRNLSVINLDPEINPEGFNILLDFMYTSRLNLREG-NIMAVMAT 106 (127)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTSTT--TTTCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTT-THHHHHHH
T ss_pred CEEEEECCEEEehHHHHHHHhC-HHHHHHhcCCc--cCCCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHH-HHHHHHHH
Confidence 4889999999999999997653 35677776431 225677888 678999999999999999987543 46788899
Q ss_pred HHHhCCCC
Q psy4757 84 LEFWGLDS 91 (169)
Q Consensus 84 ~~f~~l~~ 91 (169)
|.+|+|+.
T Consensus 107 A~~~~i~~ 114 (127)
T 1r29_A 107 AMYLQMEH 114 (127)
T ss_dssp HHHTTCHH
T ss_pred HHHhCCHH
Confidence 99999976
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.57 E-value=0.0002 Score=49.98 Aligned_cols=79 Identities=13% Similarity=0.280 Sum_probs=63.3
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEec---CCCCcHHHHHHhhhcCcccCCCCCChhHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFD---RHPGVFAQILNYYRTGKLHYPTNVCGPLFEE 82 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~D---Rdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~ 82 (169)
-|+|.|||+.|...+..|.... ..|..|+... ..+.+-++ -+|..|..+|+|+-+|++.++.+ ....+..
T Consensus 24 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~~-----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~-~v~~ll~ 96 (116)
T 2vpk_A 24 DCTIVIGEFQFKAHRNVLASFS-EYFGAIYRST-----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSW-NVKEIHQ 96 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTC-----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTT-THHHHHH
T ss_pred cEEEEECCEEEeccHHHHhhcC-HHHHHHHcCC-----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHH-HHHHHHH
Confidence 4889999999999999997653 3567777643 34566664 78999999999999999987553 4678889
Q ss_pred HHHHhCCCC
Q psy4757 83 ELEFWGLDS 91 (169)
Q Consensus 83 E~~f~~l~~ 91 (169)
-|.+|+++.
T Consensus 97 ~A~~~~i~~ 105 (116)
T 2vpk_A 97 AADYLKVEE 105 (116)
T ss_dssp HHHHTTCHH
T ss_pred HHHHhCCHH
Confidence 999999976
No 13
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.56 E-value=0.00013 Score=51.71 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=65.4
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe--cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF--DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~--DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+.... .+...+-+ +-++..|..||+|+-+|++.++.+ ....+..-
T Consensus 31 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~mf~~~~---~e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~-~v~~ll~~ 105 (124)
T 2ihc_A 31 DVTIFVEGQRFRAHRSVLAACS-SYFHSRIVGQA---DGELNITLPEEVTVKGFEPLIQFAYTAKLILSKE-NVDEVCKC 105 (124)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEEEEETT-THHHHHHH
T ss_pred CEEEEECCEEEecHHHHHHHcC-HHHHHHHcCCC---CCCceEeecCCcCHHHHHHHHHHhcCCCcccCHH-HHHHHHHH
Confidence 4889999999999999998643 35667776421 23345666 568899999999999999877543 36788899
Q ss_pred HHHhCCCCcCcCccc
Q psy4757 84 LEFWGLDSNQVEPCC 98 (169)
Q Consensus 84 ~~f~~l~~~~l~~CC 98 (169)
|.+|+++.. .+.|+
T Consensus 106 A~~~~~~~L-~~~C~ 119 (124)
T 2ihc_A 106 VEFLSVHNI-EESCF 119 (124)
T ss_dssp HHHHTBSSC-CGGGG
T ss_pred HHHHCCHHH-HHHHH
Confidence 999999874 44554
No 14
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=97.36 E-value=0.0001 Score=53.22 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=60.9
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... .+|..|+.... .+++-+ |-++..|..||+|+-+|++.++.+ ....+..-|
T Consensus 27 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~-----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~-~v~~ll~~A 99 (135)
T 2yy9_A 27 DATLDVGGLVFKAHWSVLACCS-HFFQRIYGDGT-----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG-NRDQVLLAA 99 (135)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHTCC---------CCEEECGGGHHHHHHHHHHHHHSCCCCCTT-THHHHHHHH
T ss_pred ceEEEECCEEEehHHHHHHHhC-HHHHHHHcCCC-----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH-HHHHHHHHH
Confidence 4889999999999999998653 34566665321 445555 567899999999999999987553 467888999
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
++|+|+.
T Consensus 100 ~~l~i~~ 106 (135)
T 2yy9_A 100 KELRVPE 106 (135)
T ss_dssp HHTTCHH
T ss_pred HHhCcHH
Confidence 9999986
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.30 E-value=0.00019 Score=52.52 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=63.8
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCC-CCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANY-DPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~-~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|..-+..|.... .+|..|+...... ......+-+ |-++..|..||+|+-+|++.++.+ ....+..-
T Consensus 49 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~-~v~~ll~~ 126 (144)
T 2ppi_A 49 DAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNED-TIQDVVQA 126 (144)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTT-THHHHHHH
T ss_pred ceEEEECCEEEehHHHHHHHcC-HHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHH-HHHHHHHH
Confidence 4889999999999999998653 3567777643211 134556766 568999999999999999977543 46788899
Q ss_pred HHHhCCCC
Q psy4757 84 LEFWGLDS 91 (169)
Q Consensus 84 ~~f~~l~~ 91 (169)
|.+|+|+.
T Consensus 127 A~~l~i~~ 134 (144)
T 2ppi_A 127 ADLLLLTD 134 (144)
T ss_dssp HHHTTCHH
T ss_pred HHHhCcHH
Confidence 99999976
No 16
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.29 E-value=0.00039 Score=50.17 Aligned_cols=86 Identities=14% Similarity=0.163 Sum_probs=65.2
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe--cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF--DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~--DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+.... .+...+-+ +-++..|..||+|+-+|++.++.+ ....++.-
T Consensus 38 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~---~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~-~v~~ll~~ 112 (138)
T 2z8h_A 38 DVTVLVEGQRFRAHRSVLAACS-SYFHSRIVGQT---DAELTVTLPEEVTVKGFEPLIQFAYTAKLILSKD-NVDEVCRC 112 (138)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTCC---CTTEEEECCTTSCHHHHHHHHHHHHHSCCCCCTT-THHHHHHH
T ss_pred CeEEEECCEEEechHHHHHHcC-HHHHHHHhcCC---CCCceEEeCCCCCHHHHHHHHHHhcCCCcccCHH-HHHHHHHH
Confidence 4889999999999999997653 35667776421 23345666 568899999999999999987653 36788899
Q ss_pred HHHhCCCCcCcCcc
Q psy4757 84 LEFWGLDSNQVEPC 97 (169)
Q Consensus 84 ~~f~~l~~~~l~~C 97 (169)
|.+|+++.. ...|
T Consensus 113 A~~~~i~~L-~~~C 125 (138)
T 2z8h_A 113 VEFLSVHNI-EESC 125 (138)
T ss_dssp HHHHTCGGG-HHHH
T ss_pred HHHhCCHHH-HHHH
Confidence 999999873 3344
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.22 E-value=0.00014 Score=51.21 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=61.3
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEec-CCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFFD-RHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~D-Rdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... ..|..|+... ...+-++ =++..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 29 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~-~~~~ll~~A 100 (119)
T 2q81_A 29 DCTFVVDGVHFKAHKAVLAACS-EYFKMLFVDQ------KDVVHLDISNAAGLGQVLEFMYTAKLSLSPE-NVDDVLAVA 100 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHHC------CSGGGGGGCCHHHHHHHHHHHHHSCCCCCTT-THHHHHHHH
T ss_pred ceEEEECCEEEehhHHHHHHcC-HHHHHHHcCC------CCEEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHH
Confidence 4889999999999999998653 3566777642 2334443 37889999999999999987654 467888999
Q ss_pred HHhCCCCc
Q psy4757 85 EFWGLDSN 92 (169)
Q Consensus 85 ~f~~l~~~ 92 (169)
.+|+++..
T Consensus 101 ~~l~i~~L 108 (119)
T 2q81_A 101 TFLQMQDI 108 (119)
T ss_dssp HHTTCHHH
T ss_pred HHhCCHHH
Confidence 99999863
No 18
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.21 E-value=0.00084 Score=47.14 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=62.2
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... ..|..|+.... .+++-+ |-+|..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 26 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~-----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~-~v~~ll~~A 98 (119)
T 3b84_A 26 DATLDVGGLVFKAHWSVLACCS-HFFQSLYGDGS-----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG-NRDQVLLAA 98 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTTT-----CCCEEECGGGHHHHHHHHHHHHHSCCCCCTT-THHHHHHHH
T ss_pred ceEEEECCEEEEeeHHHHhhcC-HHHHHHHCCCC-----CCeEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHH
Confidence 4789999999999999998654 34677776421 345555 567899999999999999987653 367888999
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
++|+++.
T Consensus 99 ~~~~i~~ 105 (119)
T 3b84_A 99 RELRVPE 105 (119)
T ss_dssp HHTTCHH
T ss_pred HHhCcHH
Confidence 9999976
No 19
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.15 E-value=0.00088 Score=49.43 Aligned_cols=83 Identities=20% Similarity=0.222 Sum_probs=64.4
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... .+|..|+... .......++-+ |-+|..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 36 Dv~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~-~~~~ll~~A 112 (172)
T 3htm_A 36 DCCLCVAGQEFQAHKAILAARS-PVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK-MADDLLAAA 112 (172)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHSC-CCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGG-THHHHHHHH
T ss_pred ceEEEECCEEEEeeHHHHHHcC-HHHHHHHccC-ccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHH-HHHHHHHHH
Confidence 4889999999999999998653 3567777642 22234466766 679999999999999999876543 356788899
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
.+|+++.
T Consensus 113 ~~~~~~~ 119 (172)
T 3htm_A 113 DKYALER 119 (172)
T ss_dssp HHTTCHH
T ss_pred HHhCcHH
Confidence 9999976
No 20
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=97.13 E-value=0.0014 Score=44.87 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=62.1
Q ss_pred eEEEEECc----EEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHH
Q psy4757 6 RIILNVGG----IRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLF 80 (169)
Q Consensus 6 ~v~lNVGG----~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~ 80 (169)
-|+|.||| +.|...+..|.... ..|..|+... +....+++-+ |-+|..|..+|+|+-+|++.++.+ ....+
T Consensus 10 Dv~l~v~~~~~~~~~~~Hk~iLa~~S-~~F~~~f~~~--~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~-~~~~l 85 (109)
T 2vkp_A 10 DVHFVVGPPGATRTVPAHKYVLAVGS-SVFYAMFYGD--LAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEAD-TVLAT 85 (109)
T ss_dssp CEEEEESSTTSCEEEEECHHHHHHHC-HHHHHHHC--------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTT-THHHH
T ss_pred cEEEEECCCCCcEEEEeeHHHHHHcC-HHHHHHhcCC--cccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHH-HHHHH
Confidence 48899999 99999999998653 3567777642 1212267777 679999999999999999987653 35678
Q ss_pred HHHHHHhCCCC
Q psy4757 81 EEELEFWGLDS 91 (169)
Q Consensus 81 ~~E~~f~~l~~ 91 (169)
..-|++|+++.
T Consensus 86 l~~A~~~~~~~ 96 (109)
T 2vkp_A 86 LYAAKKYIVPA 96 (109)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCcHH
Confidence 88999999976
No 21
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=97.06 E-value=0.001 Score=46.49 Aligned_cols=83 Identities=13% Similarity=0.121 Sum_probs=62.0
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... ..|..|+.... .......+-+ |-++..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 27 Dv~l~v~~~~~~aHk~vLaa~S-~~F~~~f~~~~-~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~-~~~~ll~~A 103 (120)
T 2if5_A 27 DVVILVEGREFPTHRSVLAACS-QYFKKLFTSGA-VVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTA-NVGDILSAA 103 (120)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHC------CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGG-GHHHHHHHH
T ss_pred CeEEEECCEEEeHHHHHHHHhC-HHHHHHhcCCc-cccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHH
Confidence 4889999999999999998653 35667776421 1223455655 468999999999999999877543 356788999
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
.+|+++.
T Consensus 104 ~~~~i~~ 110 (120)
T 2if5_A 104 RLLEIPA 110 (120)
T ss_dssp HHTTCHH
T ss_pred HHhCCHH
Confidence 9999976
No 22
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.05 E-value=0.00032 Score=49.75 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=59.9
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|......+ . ....++-+ |-++..|..+|+|+-||++.+..+ ....++.=|
T Consensus 32 Dv~l~v~~~~f~aHk~vLaa~S~yF-~----------~~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~-~v~~ll~aA 99 (119)
T 3m5b_A 32 DTLITVGSQEFPAHSLVLAGVSQQL-G----------RRGQWALGEGISPSTFAQLLNFVYGESVELQPG-ELRPLQEAA 99 (119)
T ss_dssp CEEEEETTEEEEECHHHHHTTCGGG-C----------CCEEEECCSSCCHHHHHHHHHHHTTCCEEECGG-GHHHHHHHH
T ss_pred ceEEEECCEEEeeEHHHHHHcCHHH-h----------cCCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHH-HHHHHHHHH
Confidence 4789999999999999998754332 1 12334444 468999999999999999987543 367788999
Q ss_pred HHhCCCCcCcCccc
Q psy4757 85 EFWGLDSNQVEPCC 98 (169)
Q Consensus 85 ~f~~l~~~~l~~CC 98 (169)
.+|+|+.. .+.||
T Consensus 100 ~~l~i~~l-~~~C~ 112 (119)
T 3m5b_A 100 RALGVQSL-EEACW 112 (119)
T ss_dssp HHTTCHHH-HHHHH
T ss_pred HHhCCHHH-HHHHH
Confidence 99999873 44454
No 23
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=96.96 E-value=0.0016 Score=45.69 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=61.4
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... ..|..++.. ...++-+ |-+|..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 30 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~------~~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~-~~~~ll~~A 101 (121)
T 1buo_A 30 DVVIMVDSQEFHAHRTVLACTS-KMFEILFHR------NSQHYTLDFLSPKTFQQILEYAYTATLQAKAE-DLDDLLYAA 101 (121)
T ss_dssp CEEEEESSCEEEECHHHHHHHC-HHHHHHTTS------CCSEEEECSSCHHHHHHHHHHHHHSCCCCCGG-GHHHHHHHH
T ss_pred CEEEEECCEEEehhHHHHhhcC-HHHHHHHcC------CCcEEEeCCCCHHHHHHHHHhhcCCCcCCCHH-HHHHHHHHH
Confidence 4889999999999999997643 356677653 2445655 468999999999999999987643 357788899
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
++|+++.
T Consensus 102 ~~~~i~~ 108 (121)
T 1buo_A 102 EILEIEY 108 (121)
T ss_dssp HHHTCHH
T ss_pred HHHCCHH
Confidence 9999976
No 24
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=96.94 E-value=0.0013 Score=46.12 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=60.0
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcc-cCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKL-HYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l-~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..++... .+++-+ |=+|..|..+|+|+-+|++ .++. .....+..-
T Consensus 33 Dv~l~v~~~~f~aHk~vLaa~S-~~F~~~f~~~------~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~ll~~ 104 (116)
T 3fkc_A 33 DVTVIVEDRKFRAHKNILSASS-TYFHQLFSVA------GQVVELSFIRAEIFAEILNYIYSSKIVRVRS-DLLDELIKS 104 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHTTSCCCSCCH-HHHHHHHHH
T ss_pred eEEEEECCEEEehhHHHHHHcC-HHHHHHHcCC------CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCH-HHHHHHHHH
Confidence 4788999999999999997653 3566776532 456666 5789999999999999998 4433 234678889
Q ss_pred HHHhCCCC
Q psy4757 84 LEFWGLDS 91 (169)
Q Consensus 84 ~~f~~l~~ 91 (169)
|++|+|+.
T Consensus 105 A~~l~i~~ 112 (116)
T 3fkc_A 105 GQLLGVKF 112 (116)
T ss_dssp HHHHTCHH
T ss_pred HHHhCccc
Confidence 99999864
No 25
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=96.92 E-value=0.00072 Score=48.52 Aligned_cols=83 Identities=20% Similarity=0.222 Sum_probs=62.8
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEEL 84 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E~ 84 (169)
-|+|.|||+.|...+..|.... .+|..++... ......+++-+ |-++..|..+|+|+-+|++.++.+ ....+..-|
T Consensus 27 Dv~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~-~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~~ll~~A 103 (145)
T 4eoz_A 27 DCCLCVAGQEFQAHKAILAARS-PVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK-MADDLLAAA 103 (145)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHSS-SHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGG-THHHHHHHH
T ss_pred ceEEEECCEEEEeehHHHHHcC-HHHHHHHcCC-CcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHH-HHHHHHHHH
Confidence 4789999999999999997653 3567777642 11122356666 678999999999999999876543 356788899
Q ss_pred HHhCCCC
Q psy4757 85 EFWGLDS 91 (169)
Q Consensus 85 ~f~~l~~ 91 (169)
.+|+++.
T Consensus 104 ~~~~~~~ 110 (145)
T 4eoz_A 104 DKYALER 110 (145)
T ss_dssp HHTTCHH
T ss_pred HHhCHHH
Confidence 9999976
No 26
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=96.83 E-value=0.00081 Score=53.15 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=60.6
Q ss_pred eEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCC-CCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 6 RIILNVGGIRYETYKATLKKIPATRLSRLTEALANY-DPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 6 ~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~-~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
-|+|.|||+.|...+..|.... ..|..|+...... .....++-+ |-++..|..||+|+-+|++.++.+ ....+..-
T Consensus 33 Dv~l~v~~~~f~~Hr~vLaa~S-~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~-~v~~ll~~ 110 (256)
T 3hve_A 33 DAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNED-TIQDVVQA 110 (256)
T ss_dssp CEEEEETTEEEEECHHHHHTTC-HHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC-C-CHHHHHHH
T ss_pred ceEEEECCEEEechHHHHHHcC-HHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHh-HHHHHHHH
Confidence 4889999999999999998764 3566776542111 233456666 578999999999999999977553 46788889
Q ss_pred HHHhCCCC
Q psy4757 84 LEFWGLDS 91 (169)
Q Consensus 84 ~~f~~l~~ 91 (169)
|.+|+++.
T Consensus 111 A~~l~i~~ 118 (256)
T 3hve_A 111 ADLLLLTD 118 (256)
T ss_dssp HHHHTCHH
T ss_pred HHHHChHH
Confidence 99999975
No 27
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=96.23 E-value=0.0058 Score=48.81 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=60.3
Q ss_pred eEEEEEC---cEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-------cCCCCcHHHHHHhhhcCcccCCCCC
Q psy4757 6 RIILNVG---GIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-------DRHPGVFAQILNYYRTGKLHYPTNV 75 (169)
Q Consensus 6 ~v~lNVG---G~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-------DRdp~~F~~IL~ylr~g~l~~p~~~ 75 (169)
-|+|.|| |+.|...+..|..... .|..|+.+. .-....+++-+ +-+|..|..||+|+-+|++.++.+
T Consensus 34 Dv~l~v~~~~~~~f~~Hr~vLaa~S~-yF~~mf~~~-~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~- 110 (279)
T 3i3n_A 34 DITLCFGGAGGREFRAHRSVLAAATE-YFTPLLSGQ-FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTG- 110 (279)
T ss_dssp CEEEECC----CEEEECHHHHHHHCT-TSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETT-
T ss_pred CeEEEEcCCCCeEEehHHHHHHHcCH-HHHHHhcCC-CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHH-
Confidence 4889998 9999999999986543 456676542 12234567777 678999999999999999987553
Q ss_pred ChhHHHHHHHHhCCCC
Q psy4757 76 CGPLFEEELEFWGLDS 91 (169)
Q Consensus 76 ~~~~~~~E~~f~~l~~ 91 (169)
....+..-|.+|+++.
T Consensus 111 ~v~~ll~~A~~l~i~~ 126 (279)
T 3i3n_A 111 SVHEVLELADRFLLIR 126 (279)
T ss_dssp THHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHCcHH
Confidence 4677888999999976
No 28
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=95.63 E-value=0.012 Score=47.66 Aligned_cols=84 Identities=20% Similarity=0.208 Sum_probs=62.4
Q ss_pred CeEEEEECcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCCCCChhHHHHH
Q psy4757 5 HRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPTNVCGPLFEEE 83 (169)
Q Consensus 5 ~~v~lNVGG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~~~~~~~~~~E 83 (169)
.-|+|.|||+.|...+..|.... ..|..|+... .-.....++-+ |-+|..|..+|+|+-+|++.++. .....++.-
T Consensus 175 ~Dv~l~v~~~~f~~Hk~vLaa~S-~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~ 251 (312)
T 3hqi_A 175 TDCCLCVAGQEFQAHKAILAARS-PVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAA 251 (312)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHTTC------CCSEEEECSSCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHH
T ss_pred CceEEEECCEEEeHHHHHHHHcC-HHHHHHhccC-ccccCCceEEecCCCHHHHHHHHHhhcCCCCCChH-HHHHHHHHH
Confidence 35889999999999999997653 3566666542 22334567777 67999999999999999986644 224678889
Q ss_pred HHHhCCCC
Q psy4757 84 LEFWGLDS 91 (169)
Q Consensus 84 ~~f~~l~~ 91 (169)
|++|+++.
T Consensus 252 A~~~~~~~ 259 (312)
T 3hqi_A 252 ADKYALER 259 (312)
T ss_dssp HHHTTCHH
T ss_pred HHHhCHHH
Confidence 99999986
No 29
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=89.98 E-value=0.15 Score=37.56 Aligned_cols=90 Identities=12% Similarity=0.139 Sum_probs=58.3
Q ss_pred EEEEE-CcEEEEecHHHHhcCCCcchhhhhhcCCCC-CCCCceEEe-cCCCCcHHHHHHhhhcCcccCCC----------
Q psy4757 7 IILNV-GGIRYETYKATLKKIPATRLSRLTEALANY-DPILNEYFF-DRHPGVFAQILNYYRTGKLHYPT---------- 73 (169)
Q Consensus 7 v~lNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~-~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~---------- 73 (169)
|+|-. .|..|.+.+.. .+... .+..|+.....- ....+.+-+ +-++.++..|+.|..+++-.-+.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~-~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSV-TIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCH-HHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhH-HHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 67764 69999999998 44433 456777642211 123456766 78899999999999987622110
Q ss_pred ------------CCCh---hHHHHHHHHhCCCCcCcCcccc
Q psy4757 74 ------------NVCG---PLFEEELEFWGLDSNQVEPCCW 99 (169)
Q Consensus 74 ------------~~~~---~~~~~E~~f~~l~~~~l~~CC~ 99 (169)
.+.. ..++.-|.|.+|... +..||.
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~L-ld~~c~ 120 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGL-LDVTCK 120 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHH-HHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHH-HHHHHH
Confidence 1222 356778999999774 777885
No 30
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=67.08 E-value=1.5 Score=31.52 Aligned_cols=85 Identities=13% Similarity=0.204 Sum_probs=55.6
Q ss_pred EEEEE-CcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccC-CC----------
Q psy4757 7 IILNV-GGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHY-PT---------- 73 (169)
Q Consensus 7 v~lNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~-p~---------- 73 (169)
|+|-- .|..|.+.+.. .+... .+..|+.... .+.+-+ +-++.+.+.|+.|....+-.- |.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~-~ik~ml~~~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSV-TIKTMLEDLG-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCH-HHHHHHHHTC-----CSSEECTTCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhH-HHHHHHHhcC-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 66666 68999999997 44443 3566666421 345655 778999999999998754211 10
Q ss_pred -----------CCCh---hHHHHHHHHhCCCCcCcCcccc
Q psy4757 74 -----------NVCG---PLFEEELEFWGLDSNQVEPCCW 99 (169)
Q Consensus 74 -----------~~~~---~~~~~E~~f~~l~~~~l~~CC~ 99 (169)
.+.. ..+..-|.|.+|..+ ++.||.
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~L-ldl~c~ 115 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL-LDVTCK 115 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHHH-HHHHHH
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHH-HHHHHH
Confidence 1222 255677888888774 667775
No 31
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=61.29 E-value=0.58 Score=34.46 Aligned_cols=88 Identities=13% Similarity=0.180 Sum_probs=35.2
Q ss_pred CeEEEEE-CcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhcCcccCCC---------
Q psy4757 5 HRIILNV-GGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRTGKLHYPT--------- 73 (169)
Q Consensus 5 ~~v~lNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~g~l~~p~--------- 73 (169)
..|+|-. .|..|.+.+... +...+ +..|+... ...+.+-+ +-++.++..|+.|..+.+-.-|.
T Consensus 4 ~~v~L~SsDg~~f~v~~~vA-~~S~~-ik~ml~~~----~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 77 (160)
T 2p1m_A 4 KKIVLKSSDGESFEVEEAVA-LESQT-IAHMVEDD----CVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAA 77 (160)
T ss_dssp ----CCC---------CHHH-HTCTT-TC----------------CCTTSCHHHHHHHHHC-------------------
T ss_pred CEEEEEcCCCCEEEECHHHH-HHhHH-HHHHHHcc----CCCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 4577775 699999999984 44444 45665532 12335555 67889999999999876522100
Q ss_pred --------------CCC---hhHHHHHHHHhCCCCcCcCcccc
Q psy4757 74 --------------NVC---GPLFEEELEFWGLDSNQVEPCCW 99 (169)
Q Consensus 74 --------------~~~---~~~~~~E~~f~~l~~~~l~~CC~ 99 (169)
.+. ...+..-|.|.+|..+ +..||.
T Consensus 78 ~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~L-ldl~c~ 119 (160)
T 2p1m_A 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNL-LDLTCQ 119 (160)
T ss_dssp -----------------------CHHHHHHTTCHHH-HHHHHH
T ss_pred cccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHH-HHHHHH
Confidence 111 1245567888888774 667776
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=50.02 E-value=24 Score=23.17 Aligned_cols=57 Identities=14% Similarity=0.258 Sum_probs=36.6
Q ss_pred EEEEE-CcEEEEecHHHHhcCCCcchhhhhhcCCCC-CCCCceEEe-cCCCCcHHHHHHhhh
Q psy4757 7 IILNV-GGIRYETYKATLKKIPATRLSRLTEALANY-DPILNEYFF-DRHPGVFAQILNYYR 65 (169)
Q Consensus 7 v~lNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~-~~~~~e~f~-DRdp~~F~~IL~ylr 65 (169)
|+|-- +|..|.+.+.. .....+ +..|+...... ....+.+-+ +-++.+.+.|+.|..
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~-ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGT-IKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHH-HHHHHCCC--------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHH-HHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHH
Confidence 44443 69999999998 554444 56666542111 223567766 578999999999987
No 33
>1t3u_A Conserved hypothetical protein; NYSGXRC, unknown ORF, COG3027, PSI, protein structure initiative; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.244.1.1 PDB: 1w2e_A
Probab=49.01 E-value=11 Score=25.31 Aligned_cols=19 Identities=11% Similarity=0.170 Sum_probs=12.5
Q ss_pred CCCCCeEEEEECcEEEEec
Q psy4757 1 MDGEHRIILNVGGIRYETY 19 (169)
Q Consensus 1 ~~~~~~v~lNVGG~~f~t~ 19 (169)
|+....|+++|.|+.|.+.
T Consensus 1 Ms~~~~v~V~I~G~~Y~l~ 19 (104)
T 1t3u_A 1 MSQSNTLTVQILDKEYCIN 19 (104)
T ss_dssp -----CEEEEETTEEEEEC
T ss_pred CCCCCeEEEEECCEEEEee
Confidence 7766789999999999764
No 34
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=48.54 E-value=40 Score=22.30 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=42.6
Q ss_pred CCCCCeEEEEE-CcEEEEecHHHHhcCCCcchhhhhhcCCCCCCCCceEEe-cCCCCcHHHHHHhhhc
Q psy4757 1 MDGEHRIILNV-GGIRYETYKATLKKIPATRLSRLTEALANYDPILNEYFF-DRHPGVFAQILNYYRT 66 (169)
Q Consensus 1 ~~~~~~v~lNV-GG~~f~t~~~tL~~~p~s~l~~l~~~~~~~~~~~~e~f~-DRdp~~F~~IL~ylr~ 66 (169)
|++ ..|+|-- .|..|.+.+... +...+ +..|+.. .+...++.+-+ +-++...+.|+.|...
T Consensus 1 m~~-~~v~L~SsDg~~f~V~~~vA-~~S~~-ik~ml~~--~~e~~~~~Iplp~V~~~iL~kVieyc~~ 63 (99)
T 1hv2_A 1 MSQ-DFVTLVSKDDKEYEISRSAA-MISPT-LKAMIEG--PFRESKGRIELKQFDSHILEKAVEYLNY 63 (99)
T ss_dssp CCC-SEEEEEETTTEEEEEEHHHH-TTCHH-HHHHHHS--STTTCTTEEEETTSCHHHHHHHHHHHHH
T ss_pred CCC-cEEEEEecCCCEEEECHHHH-HHhHH-HHHHHhc--ccccCCCceecCCcCHHHHHHHHHHHHH
Confidence 554 4566666 799999999974 44433 5667664 22344467777 6788899999999876
No 35
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=45.01 E-value=8.1 Score=28.51 Aligned_cols=95 Identities=12% Similarity=0.185 Sum_probs=56.0
Q ss_pred CCCCCeEEEEEC-cEEEEecHHHHhcCCCcchhhhhhcCCC--CC-CCCceEEe-cCCCCcHHHHHHhhhcCccc-CCC-
Q psy4757 1 MDGEHRIILNVG-GIRYETYKATLKKIPATRLSRLTEALAN--YD-PILNEYFF-DRHPGVFAQILNYYRTGKLH-YPT- 73 (169)
Q Consensus 1 ~~~~~~v~lNVG-G~~f~t~~~tL~~~p~s~l~~l~~~~~~--~~-~~~~e~f~-DRdp~~F~~IL~ylr~g~l~-~p~- 73 (169)
|+. ..|+|--+ |..|.+.+..... . ..+..|+..... .. +..+.+-+ +-++.++..|+.|+..-+-. .|.
T Consensus 4 m~~-~~i~L~SsDG~~F~V~~~vA~~-S-~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 4 MVT-SNVVLVSGEGERFTVDKKIAER-S-LLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp --C-CEEEEECTTCCEEEEEHHHHTT-S-HHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCC-CeEEEEeCCCCEEEecHHHHHH-h-HHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccc
Confidence 554 56666554 9999999998654 2 345666653211 11 22366766 78899999999999874321 111
Q ss_pred -------------------CCCh---hHHHHHHHHhCCCCcCcCcccc
Q psy4757 74 -------------------NVCG---PLFEEELEFWGLDSNQVEPCCW 99 (169)
Q Consensus 74 -------------------~~~~---~~~~~E~~f~~l~~~~l~~CC~ 99 (169)
.+.. -.+..-|.|.+|..+ +..||.
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~L-ldl~c~ 127 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPL-LDAGCK 127 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHH-HHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHH-HHHHHH
Confidence 1221 245667888888764 666775
No 36
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=30.98 E-value=30 Score=24.71 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=13.1
Q ss_pred CCCCCeEEEEECcEEEEec
Q psy4757 1 MDGEHRIILNVGGIRYETY 19 (169)
Q Consensus 1 ~~~~~~v~lNVGG~~f~t~ 19 (169)
|+..++|.++|.|+.|.+.
T Consensus 4 Ms~k~~V~V~I~Gk~Y~i~ 22 (138)
T 3hnw_A 4 MSSKNTAEVILGGKVIKLG 22 (138)
T ss_dssp -----CEEEEETTEEEEEC
T ss_pred CCCCCeeEEEECCEEEEec
Confidence 7888899999999999876
No 37
>3h3g_B Parathyroid hormone-related protein; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli}
Probab=21.39 E-value=42 Score=16.78 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=7.3
Q ss_pred hhhHHHHHc
Q psy4757 149 QRLKPKVWS 157 (169)
Q Consensus 149 ~~~r~~iW~ 157 (169)
..+||+||.
T Consensus 5 Q~~rRr~wL 13 (24)
T 3h3g_B 5 QDLRRRFFL 13 (26)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 577999995
Done!