Query psy4758
Match_columns 318
No_of_seqs 513 out of 1114
Neff 11.4
Searched_HMMs 46136
Date Fri Aug 16 16:55:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4758.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4758hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532|consensus 100.0 3.5E-34 7.6E-39 244.1 26.9 306 1-309 153-459 (466)
2 COG2271 UhpC Sugar phosphate p 100.0 1.9E-33 4E-38 227.5 18.5 287 1-300 142-437 (448)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 4.1E-31 8.8E-36 230.7 28.3 303 1-306 156-459 (465)
4 COG2814 AraJ Arabinose efflux 100.0 3.9E-29 8.4E-34 205.0 20.7 264 2-301 127-390 (394)
5 PRK09556 uhpT sugar phosphate 100.0 9.7E-29 2.1E-33 215.5 17.9 284 1-297 147-449 (467)
6 PRK11663 regulatory protein Uh 100.0 3.9E-28 8.4E-33 209.8 21.0 282 2-299 137-426 (434)
7 PRK03545 putative arabinose tr 100.0 2.1E-27 4.5E-32 202.8 21.7 258 2-298 123-381 (390)
8 TIGR00893 2A0114 d-galactonate 100.0 1E-26 2.3E-31 198.9 23.2 284 2-294 108-396 (399)
9 COG2223 NarK Nitrate/nitrite t 100.0 3.3E-27 7.2E-32 191.6 18.4 267 1-300 129-404 (417)
10 PRK11273 glpT sn-glycerol-3-ph 100.0 4E-27 8.8E-32 204.5 19.3 289 2-303 146-441 (452)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5E-27 1.1E-31 201.4 19.5 271 2-286 122-410 (412)
12 TIGR00903 2A0129 major facilit 100.0 1.8E-26 4E-31 194.1 20.9 258 2-294 104-362 (368)
13 PLN00028 nitrate transmembrane 99.9 5.8E-26 1.2E-30 198.1 21.8 278 2-298 149-434 (476)
14 PRK11551 putative 3-hydroxyphe 99.9 6.9E-26 1.5E-30 194.7 21.2 264 2-297 129-396 (406)
15 PRK10642 proline/glycine betai 99.9 5.1E-26 1.1E-30 199.5 20.5 276 1-299 143-432 (490)
16 TIGR00712 glpT glycerol-3-phos 99.9 4.2E-26 9E-31 197.5 19.7 287 2-300 144-436 (438)
17 PRK11010 ampG muropeptide tran 99.9 2.1E-25 4.5E-30 195.0 22.0 267 2-298 133-404 (491)
18 TIGR00899 2A0120 sugar efflux 99.9 3.9E-25 8.5E-30 188.0 20.4 258 3-296 114-373 (375)
19 PRK09705 cynX putative cyanate 99.9 6.3E-25 1.4E-29 187.4 21.5 262 2-301 123-385 (393)
20 TIGR00897 2A0118 polyol permea 99.9 6.5E-25 1.4E-29 188.1 21.4 265 2-297 131-401 (402)
21 TIGR00887 2A0109 phosphate:H+ 99.9 4.8E-25 1E-29 194.0 20.9 285 1-297 140-489 (502)
22 PRK10489 enterobactin exporter 99.9 4E-25 8.7E-30 190.4 19.9 263 1-296 135-398 (417)
23 PRK09952 shikimate transporter 99.9 6.7E-25 1.4E-29 189.7 21.1 268 2-297 151-433 (438)
24 TIGR00890 2A0111 Oxalate/Forma 99.9 5.1E-25 1.1E-29 187.3 19.4 256 2-290 117-375 (377)
25 PRK10406 alpha-ketoglutarate t 99.9 9.5E-25 2.1E-29 188.7 20.4 261 1-296 149-423 (432)
26 PRK03699 putative transporter; 99.9 1.7E-24 3.7E-29 185.0 20.8 263 2-300 121-383 (394)
27 PRK10091 MFS transport protein 99.9 1.3E-24 2.8E-29 185.0 19.6 260 2-299 117-378 (382)
28 PRK15011 sugar efflux transpor 99.9 2.8E-24 6E-29 183.6 20.2 256 3-296 132-390 (393)
29 TIGR00892 2A0113 monocarboxyla 99.9 2.7E-25 5.7E-30 193.0 14.0 275 2-291 134-415 (455)
30 KOG2533|consensus 99.9 4.8E-25 1E-29 188.7 15.0 267 1-280 159-439 (495)
31 PRK15402 multidrug efflux syst 99.9 1.5E-23 3.2E-28 180.1 23.8 240 2-269 127-371 (406)
32 PRK10077 xylE D-xylose transpo 99.9 9.1E-25 2E-29 191.7 16.3 282 1-299 145-459 (479)
33 PRK14995 methyl viologen resis 99.9 6.9E-24 1.5E-28 186.2 21.2 253 3-267 121-412 (495)
34 PRK12307 putative sialic acid 99.9 1.9E-24 4.1E-29 186.9 17.3 253 2-278 132-389 (426)
35 TIGR00879 SP MFS transporter, 99.9 3.8E-24 8.3E-29 187.7 18.6 281 1-298 152-471 (481)
36 PRK10213 nepI ribonucleoside t 99.9 1.9E-23 4.1E-28 178.3 21.8 251 2-290 134-384 (394)
37 PRK10504 putative transporter; 99.9 1.3E-23 2.9E-28 183.9 20.1 254 2-268 124-415 (471)
38 TIGR00881 2A0104 phosphoglycer 99.9 1.6E-24 3.4E-29 184.4 13.5 263 2-277 109-377 (379)
39 TIGR00710 efflux_Bcr_CflA drug 99.9 5E-23 1.1E-27 175.8 22.3 237 2-267 119-360 (385)
40 PRK11902 ampG muropeptide tran 99.9 3.7E-23 8E-28 177.3 21.2 265 2-299 120-392 (402)
41 PRK09874 drug efflux system pr 99.9 2.8E-23 6E-28 178.7 20.4 263 2-298 132-399 (408)
42 TIGR00900 2A0121 H+ Antiporter 99.9 6.3E-24 1.4E-28 179.9 16.0 243 1-268 117-363 (365)
43 PRK11102 bicyclomycin/multidru 99.9 5.9E-23 1.3E-27 174.8 21.5 236 2-263 105-344 (377)
44 TIGR01299 synapt_SV2 synaptic 99.9 2.1E-23 4.6E-28 187.2 19.5 279 2-297 281-734 (742)
45 PRK05122 major facilitator sup 99.9 6.6E-23 1.4E-27 175.8 21.5 255 2-301 138-393 (399)
46 PRK15034 nitrate/nitrite trans 99.9 3.4E-23 7.4E-28 175.9 18.3 262 1-300 152-457 (462)
47 PRK11646 multidrug resistance 99.9 4.8E-23 1E-27 176.1 18.8 259 2-294 125-385 (400)
48 TIGR00902 2A0127 phenyl propri 99.9 8.6E-23 1.9E-27 173.8 20.3 251 7-292 123-374 (382)
49 TIGR00711 efflux_EmrB drug res 99.9 1.9E-23 4E-28 183.8 15.8 256 2-268 116-410 (485)
50 PRK15075 citrate-proton sympor 99.9 9.1E-23 2E-27 176.5 19.7 240 1-270 142-396 (434)
51 PRK11043 putative transporter; 99.9 4.2E-22 9.2E-27 170.9 22.3 236 2-268 120-357 (401)
52 PRK10473 multidrug efflux syst 99.9 2.6E-22 5.6E-27 171.7 20.7 231 2-268 117-349 (392)
53 PRK09528 lacY galactoside perm 99.9 4.9E-23 1.1E-27 177.6 16.1 264 8-299 137-405 (420)
54 TIGR00883 2A0106 metabolite-pr 99.9 1.2E-22 2.6E-27 173.7 17.9 257 1-286 121-390 (394)
55 TIGR00898 2A0119 cation transp 99.9 4.9E-22 1.1E-26 175.5 21.7 274 1-299 205-497 (505)
56 TIGR00891 2A0112 putative sial 99.9 1.2E-22 2.7E-27 174.4 17.3 264 2-281 126-400 (405)
57 PF07690 MFS_1: Major Facilita 99.9 2.6E-23 5.7E-28 175.2 12.6 236 2-259 111-352 (352)
58 PRK12382 putative transporter; 99.9 1E-21 2.3E-26 168.0 21.9 250 2-296 138-388 (392)
59 PRK03893 putative sialic acid 99.9 1.7E-22 3.7E-27 178.2 17.4 271 2-288 134-444 (496)
60 TIGR02718 sider_RhtX_FptX side 99.9 9.5E-22 2.1E-26 168.0 21.3 255 3-292 124-386 (390)
61 PRK15403 multidrug efflux syst 99.9 8.3E-22 1.8E-26 169.2 19.9 243 2-268 130-373 (413)
62 PRK11128 putative 3-phenylprop 99.9 2.1E-21 4.6E-26 165.3 19.5 250 7-291 123-373 (382)
63 PRK11195 lysophospholipid tran 99.9 1.3E-21 2.8E-26 167.0 17.6 267 1-298 113-381 (393)
64 KOG2504|consensus 99.9 4.1E-22 8.9E-27 172.5 14.7 280 3-297 162-476 (509)
65 PRK10054 putative transporter; 99.9 9.4E-22 2E-26 167.9 16.7 256 2-294 122-381 (395)
66 TIGR00901 2A0125 AmpG-related 99.9 8E-22 1.7E-26 166.5 16.0 224 2-252 109-355 (356)
67 PRK06814 acylglycerophosphoeth 99.9 1.4E-21 3.1E-26 188.0 19.6 259 1-287 133-412 (1140)
68 TIGR01272 gluP glucose/galacto 99.9 3.3E-21 7.1E-26 158.5 19.0 250 2-285 36-303 (310)
69 cd06174 MFS The Major Facilita 99.9 3.7E-21 8.1E-26 162.0 19.4 235 2-294 113-349 (352)
70 TIGR00895 2A0115 benzoate tran 99.9 1.3E-21 2.9E-26 167.6 16.9 251 2-265 131-397 (398)
71 TIGR00792 gph sugar (Glycoside 99.9 1.2E-21 2.6E-26 170.1 16.3 241 2-269 125-381 (437)
72 PRK03633 putative MFS family t 99.9 6.3E-21 1.4E-25 162.4 20.2 248 3-294 121-369 (381)
73 TIGR00889 2A0110 nucleoside tr 99.9 9.4E-21 2E-25 162.7 20.8 257 9-300 133-405 (418)
74 TIGR00886 2A0108 nitrite extru 99.9 1.8E-21 3.9E-26 165.0 16.0 238 2-255 116-366 (366)
75 PRK11652 emrD multidrug resist 99.9 4.6E-20 9.9E-25 158.0 24.1 237 2-268 122-360 (394)
76 COG2807 CynX Cyanate permease 99.9 1.2E-20 2.6E-25 150.6 18.6 260 3-298 126-386 (395)
77 TIGR00896 CynX cyanate transpo 99.9 6.4E-21 1.4E-25 160.9 17.5 236 2-270 113-350 (355)
78 PRK10133 L-fucose transporter; 99.9 1.3E-20 2.7E-25 162.7 19.5 258 2-292 143-428 (438)
79 TIGR00882 2A0105 oligosacchari 99.9 2E-20 4.3E-25 160.2 18.9 259 8-294 129-392 (396)
80 KOG0569|consensus 99.9 1.3E-20 2.9E-25 159.6 16.7 284 1-301 141-458 (485)
81 PRK08633 2-acyl-glycerophospho 99.9 4.2E-20 9.1E-25 178.3 20.6 264 1-288 128-401 (1146)
82 PF05977 MFS_3: Transmembrane 99.9 4.7E-20 1E-24 160.5 18.3 264 2-296 129-393 (524)
83 PF11700 ATG22: Vacuole efflux 99.8 1.2E-18 2.6E-23 150.2 21.8 268 11-300 187-471 (477)
84 TIGR00885 fucP L-fucose:H+ sym 99.8 6.6E-19 1.4E-23 150.8 18.6 254 3-288 121-403 (410)
85 KOG0253|consensus 99.8 1.6E-18 3.4E-23 138.4 19.0 279 3-301 192-523 (528)
86 KOG1330|consensus 99.8 4.8E-20 1E-24 151.5 8.4 261 1-269 146-413 (493)
87 KOG3764|consensus 99.8 1.7E-19 3.6E-24 145.4 9.9 264 2-298 185-455 (464)
88 PF06609 TRI12: Fungal trichot 99.8 2.9E-17 6.3E-22 142.9 19.6 288 1-299 155-556 (599)
89 TIGR00805 oat sodium-independe 99.8 3E-17 6.4E-22 147.2 19.6 172 1-173 197-397 (633)
90 KOG4686|consensus 99.8 5.5E-17 1.2E-21 125.3 16.1 276 3-302 163-448 (459)
91 COG0738 FucP Fucose permease [ 99.8 5.6E-17 1.2E-21 131.7 16.6 245 2-280 130-392 (422)
92 PF13347 MFS_2: MFS/sugar tran 99.7 3.3E-16 7.2E-21 135.4 21.0 240 2-269 129-385 (428)
93 KOG2563|consensus 99.7 9.2E-17 2E-21 132.0 14.8 276 3-300 167-453 (480)
94 PF03825 Nuc_H_symport: Nucleo 99.7 1.2E-15 2.5E-20 129.4 20.1 264 9-299 122-397 (400)
95 PRK10207 dipeptide/tripeptide 99.7 1.4E-15 3E-20 132.8 20.0 293 1-298 130-477 (489)
96 PRK09669 putative symporter Ya 99.7 2.1E-16 4.5E-21 137.4 14.2 239 2-270 135-390 (444)
97 COG2270 Permeases of the major 99.7 5.3E-16 1.2E-20 126.9 15.5 274 2-299 141-431 (438)
98 PF01306 LacY_symp: LacY proto 99.7 1.8E-15 3.8E-20 126.2 18.4 263 11-301 137-404 (412)
99 PRK10429 melibiose:sodium symp 99.7 2.4E-16 5.3E-21 137.8 13.4 243 2-269 132-394 (473)
100 PF00083 Sugar_tr: Sugar (and 99.7 8.3E-21 1.8E-25 165.4 -14.8 282 1-300 127-439 (451)
101 PRK09848 glucuronide transport 99.7 3.1E-16 6.7E-21 136.5 13.6 234 6-269 140-389 (448)
102 PRK10054 putative transporter; 99.7 3.8E-16 8.2E-21 133.5 13.8 173 107-295 7-180 (395)
103 PRK15462 dipeptide/tripeptide 99.7 5.5E-16 1.2E-20 133.6 14.7 175 106-295 8-187 (493)
104 COG2211 MelB Na+/melibiose sym 99.7 2.2E-15 4.7E-20 127.0 17.0 241 6-270 143-398 (467)
105 TIGR00924 yjdL_sub1_fam amino 99.7 7.6E-15 1.7E-19 128.1 21.1 286 2-298 128-469 (475)
106 TIGR00924 yjdL_sub1_fam amino 99.7 1E-15 2.2E-20 133.5 14.6 176 107-297 10-192 (475)
107 KOG2615|consensus 99.7 7.9E-16 1.7E-20 123.7 11.9 256 1-269 145-415 (451)
108 TIGR00788 fbt folate/biopterin 99.7 4.1E-16 9E-21 135.7 11.1 254 2-270 146-415 (468)
109 PRK09584 tppB putative tripept 99.7 3E-15 6.4E-20 131.4 16.3 179 102-295 15-199 (500)
110 PRK11663 regulatory protein Uh 99.7 2.8E-15 6.1E-20 129.9 15.9 171 107-293 23-194 (434)
111 COG2271 UhpC Sugar phosphate p 99.7 5.7E-16 1.2E-20 126.6 10.7 180 107-302 29-211 (448)
112 TIGR01301 GPH_sucrose GPH fami 99.7 2.2E-14 4.8E-19 123.2 20.6 280 1-300 139-474 (477)
113 PF03209 PUCC: PUCC protein; 99.7 2.4E-14 5.2E-19 117.5 19.0 271 2-297 115-398 (403)
114 KOG0254|consensus 99.7 3.1E-15 6.6E-20 132.2 14.8 274 1-291 167-476 (513)
115 PF07690 MFS_1: Major Facilita 99.6 3.8E-15 8.2E-20 125.6 14.0 165 114-293 3-168 (352)
116 PRK11462 putative transporter; 99.6 9.8E-15 2.1E-19 127.0 16.7 231 7-268 141-387 (460)
117 PRK10207 dipeptide/tripeptide 99.6 1.1E-14 2.4E-19 127.2 15.1 175 107-296 14-193 (489)
118 PRK11646 multidrug resistance 99.6 1.1E-14 2.4E-19 124.8 14.6 170 110-295 13-183 (400)
119 PRK03699 putative transporter; 99.6 4.3E-14 9.4E-19 121.0 17.6 173 107-294 7-180 (394)
120 PRK10504 putative transporter; 99.6 1.6E-14 3.4E-19 126.8 15.2 176 107-298 10-186 (471)
121 PRK10489 enterobactin exporter 99.6 7.9E-15 1.7E-19 126.6 12.8 184 98-297 8-197 (417)
122 PLN00028 nitrate transmembrane 99.6 1.9E-14 4E-19 126.0 15.2 170 116-298 45-220 (476)
123 KOG0252|consensus 99.6 3.2E-16 6.9E-21 128.9 3.7 292 2-305 170-506 (538)
124 PRK09528 lacY galactoside perm 99.6 1.1E-14 2.3E-19 125.9 13.2 182 102-298 5-192 (420)
125 PRK14995 methyl viologen resis 99.6 3.8E-14 8.2E-19 124.8 16.8 175 109-298 8-183 (495)
126 TIGR00900 2A0121 H+ Antiporter 99.6 7.8E-15 1.7E-19 124.3 11.9 171 111-297 3-179 (365)
127 TIGR00886 2A0108 nitrite extru 99.6 2E-14 4.3E-19 122.0 14.3 173 108-292 2-183 (366)
128 PRK09584 tppB putative tripept 99.6 2E-13 4.4E-18 119.9 19.9 285 2-296 138-478 (500)
129 COG2814 AraJ Arabinose efflux 99.6 3.5E-14 7.6E-19 117.3 13.7 177 107-298 13-189 (394)
130 TIGR00710 efflux_Bcr_CflA drug 99.6 2.4E-14 5.2E-19 122.3 13.1 171 111-297 9-180 (385)
131 KOG0255|consensus 99.6 2.6E-13 5.6E-18 120.5 19.9 246 1-265 196-465 (521)
132 PRK03545 putative arabinose tr 99.6 3.4E-14 7.4E-19 121.6 13.9 171 109-295 11-182 (390)
133 PRK10091 MFS transport protein 99.6 3.7E-14 8E-19 121.0 14.0 172 107-294 3-175 (382)
134 TIGR00891 2A0112 putative sial 99.6 2.5E-14 5.4E-19 123.0 12.8 171 108-292 13-184 (405)
135 TIGR00711 efflux_EmrB drug res 99.6 4.4E-14 9.5E-19 124.5 14.4 172 110-297 5-177 (485)
136 PRK10473 multidrug efflux syst 99.6 5.3E-14 1.2E-18 120.5 14.6 175 107-297 3-178 (392)
137 TIGR00893 2A0114 d-galactonate 99.6 1.8E-14 3.9E-19 123.3 11.5 161 121-297 8-169 (399)
138 PRK10213 nepI ribonucleoside t 99.6 5.8E-14 1.3E-18 120.1 14.5 157 120-292 33-190 (394)
139 TIGR00890 2A0111 Oxalate/Forma 99.6 3E-14 6.5E-19 121.2 12.1 163 119-297 15-177 (377)
140 PRK11551 putative 3-hydroxyphe 99.6 7.9E-14 1.7E-18 120.0 14.8 170 110-295 18-188 (406)
141 TIGR00882 2A0105 oligosacchari 99.6 7E-14 1.5E-18 119.9 13.9 175 106-297 1-183 (396)
142 PRK09874 drug efflux system pr 99.6 6.2E-14 1.3E-18 120.8 13.5 175 107-298 14-194 (408)
143 PRK11043 putative transporter; 99.6 1E-13 2.2E-18 119.1 14.6 169 114-297 10-181 (401)
144 TIGR00881 2A0104 phosphoglycer 99.6 2E-14 4.4E-19 122.3 10.1 166 116-297 4-171 (379)
145 TIGR00903 2A0129 major facilit 99.6 6.9E-14 1.5E-18 118.1 13.2 163 120-298 4-166 (368)
146 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1.1E-13 2.5E-18 119.0 14.5 177 109-297 10-189 (412)
147 TIGR00897 2A0118 polyol permea 99.6 1.3E-13 2.9E-18 118.3 14.9 162 107-283 13-179 (402)
148 PRK03633 putative MFS family t 99.6 2.1E-13 4.5E-18 116.3 15.9 152 106-268 5-156 (381)
149 PRK05122 major facilitator sup 99.5 1E-13 2.2E-18 119.0 13.7 167 106-287 14-189 (399)
150 TIGR00806 rfc RFC reduced fola 99.5 3.3E-13 7.2E-18 113.7 16.1 281 1-291 139-442 (511)
151 PRK12382 putative transporter; 99.5 1.6E-13 3.4E-18 117.6 14.4 164 106-284 14-186 (392)
152 TIGR00712 glpT glycerol-3-phos 99.5 1.1E-13 2.3E-18 120.2 13.3 176 105-296 25-205 (438)
153 PRK12307 putative sialic acid 99.5 1.3E-13 2.9E-18 119.4 13.6 162 108-285 19-181 (426)
154 TIGR00899 2A0120 sugar efflux 99.5 1.4E-13 3E-18 117.2 13.4 170 113-296 3-175 (375)
155 PRK09705 cynX putative cyanate 99.5 2.8E-13 6.1E-18 115.9 14.8 152 124-290 26-177 (393)
156 PRK03893 putative sialic acid 99.5 2.4E-13 5.3E-18 120.1 14.7 162 108-285 21-183 (496)
157 KOG3626|consensus 99.5 1.6E-12 3.5E-17 114.6 19.1 173 1-173 262-459 (735)
158 PRK15011 sugar efflux transpor 99.5 5.1E-13 1.1E-17 114.4 15.6 178 106-298 14-195 (393)
159 PRK11273 glpT sn-glycerol-3-ph 99.5 3.7E-13 8.1E-18 117.3 14.4 153 127-296 49-207 (452)
160 PRK11102 bicyclomycin/multidru 99.5 1.5E-13 3.3E-18 117.1 11.7 158 123-296 7-165 (377)
161 PRK11195 lysophospholipid tran 99.5 3.3E-13 7.2E-18 115.4 13.0 171 106-296 2-173 (393)
162 TIGR00895 2A0115 benzoate tran 99.5 2.2E-13 4.9E-18 116.7 11.8 165 114-294 24-189 (398)
163 TIGR00892 2A0113 monocarboxyla 99.5 3E-13 6.4E-18 117.9 12.7 157 125-297 37-194 (455)
164 PRK11652 emrD multidrug resist 99.5 5.7E-13 1.2E-17 114.2 14.1 167 112-294 13-180 (394)
165 PRK15402 multidrug efflux syst 99.5 6.2E-13 1.3E-17 114.5 14.2 158 123-296 29-187 (406)
166 PRK15403 multidrug efflux syst 99.5 8.7E-13 1.9E-17 113.5 14.6 153 127-295 36-189 (413)
167 TIGR01299 synapt_SV2 synaptic 99.5 5.6E-13 1.2E-17 120.6 13.6 160 126-297 186-355 (742)
168 PRK15034 nitrate/nitrite trans 99.5 5E-13 1.1E-17 114.3 11.6 181 106-298 33-233 (462)
169 TIGR00885 fucP L-fucose:H+ sym 99.5 2E-12 4.4E-17 110.9 15.1 173 109-293 5-203 (410)
170 PTZ00207 hypothetical protein; 99.5 5.6E-12 1.2E-16 110.9 17.8 289 2-296 146-551 (591)
171 cd06174 MFS The Major Facilita 99.5 1E-12 2.2E-17 110.6 12.8 168 111-294 3-171 (352)
172 COG2223 NarK Nitrate/nitrite t 99.4 1.9E-12 4.2E-17 106.2 12.1 174 112-300 18-196 (417)
173 PRK09556 uhpT sugar phosphate 99.4 9.7E-13 2.1E-17 115.2 10.9 161 123-296 45-211 (467)
174 COG3104 PTR2 Dipeptide/tripept 99.4 1.8E-12 3.9E-17 108.8 10.7 186 102-302 15-211 (498)
175 TIGR00902 2A0127 phenyl propri 99.4 4.2E-12 9.2E-17 108.3 13.3 162 109-285 6-167 (382)
176 KOG1330|consensus 99.4 6.2E-13 1.3E-17 110.1 7.6 180 107-301 33-213 (493)
177 PRK11128 putative 3-phenylprop 99.4 6.6E-12 1.4E-16 107.2 13.3 162 114-291 11-173 (382)
178 TIGR00879 SP MFS transporter, 99.4 3.1E-12 6.7E-17 112.4 10.6 141 142-297 70-217 (481)
179 KOG3764|consensus 99.4 2.9E-12 6.2E-17 104.2 8.7 151 138-303 101-253 (464)
180 KOG2816|consensus 99.4 1.7E-11 3.8E-16 105.0 14.1 253 1-268 137-392 (463)
181 TIGR01301 GPH_sucrose GPH fami 99.4 1.5E-11 3.2E-16 106.0 13.7 182 109-300 6-221 (477)
182 PF05977 MFS_3: Transmembrane 99.4 1.6E-11 3.4E-16 107.5 13.9 180 103-297 6-190 (524)
183 TIGR00806 rfc RFC reduced fola 99.4 2.7E-11 5.9E-16 102.4 14.6 162 126-301 44-207 (511)
184 PRK10133 L-fucose transporter; 99.4 4.2E-11 9E-16 103.8 16.3 147 108-266 27-177 (438)
185 TIGR00896 CynX cyanate transpo 99.4 8.7E-12 1.9E-16 105.4 11.8 150 125-289 18-167 (355)
186 TIGR00894 2A0114euk Na(+)-depe 99.3 3.9E-12 8.4E-17 111.5 9.0 148 137-298 70-220 (465)
187 PRK11010 ampG muropeptide tran 99.3 5.1E-11 1.1E-15 104.8 15.1 179 102-296 7-194 (491)
188 TIGR00880 2_A_01_02 Multidrug 99.3 1.5E-11 3.2E-16 89.1 9.9 135 148-297 3-138 (141)
189 PTZ00207 hypothetical protein; 99.3 3.5E-11 7.7E-16 105.9 13.7 161 120-298 40-206 (591)
190 PRK11902 ampG muropeptide tran 99.3 4.3E-11 9.3E-16 102.9 14.1 169 112-295 4-180 (402)
191 PF03137 OATP: Organic Anion T 99.3 3E-13 6.6E-18 118.6 0.0 261 1-268 166-514 (539)
192 PF01306 LacY_symp: LacY proto 99.3 7.6E-12 1.6E-16 104.7 8.2 178 104-297 4-188 (412)
193 PRK06814 acylglycerophosphoeth 99.3 5.9E-11 1.3E-15 115.1 15.2 184 102-297 6-195 (1140)
194 TIGR00805 oat sodium-independe 99.3 5.1E-11 1.1E-15 107.4 12.9 160 128-299 54-283 (633)
195 PRK10077 xylE D-xylose transpo 99.3 1E-11 2.2E-16 109.4 8.3 150 138-298 50-216 (479)
196 PRK09952 shikimate transporter 99.3 2.1E-10 4.5E-15 99.7 15.5 168 109-288 24-211 (438)
197 PRK15462 dipeptide/tripeptide 99.3 3.2E-09 6.9E-14 92.2 22.4 279 2-289 126-469 (493)
198 PF06609 TRI12: Fungal trichot 99.3 1.3E-10 2.9E-15 101.8 13.9 177 104-298 37-218 (599)
199 PRK10406 alpha-ketoglutarate t 99.3 2.1E-10 4.4E-15 99.6 14.8 164 114-289 29-211 (432)
200 TIGR00887 2A0109 phosphate:H+ 99.2 1.1E-10 2.4E-15 103.2 12.8 148 140-298 53-226 (502)
201 TIGR00901 2A0125 AmpG-related 99.2 8.2E-11 1.8E-15 99.5 11.3 159 126-296 7-177 (356)
202 TIGR00792 gph sugar (Glycoside 99.2 1.2E-10 2.5E-15 101.4 12.6 171 117-297 9-194 (437)
203 PRK10642 proline/glycine betai 99.2 2.3E-10 5.1E-15 100.8 13.5 170 109-290 18-206 (490)
204 PRK15075 citrate-proton sympor 99.2 3.2E-10 6.9E-15 98.5 13.7 163 109-283 17-198 (434)
205 PRK08633 2-acyl-glycerophospho 99.2 2.4E-10 5.3E-15 111.1 14.3 156 102-268 4-165 (1146)
206 TIGR00898 2A0119 cation transp 99.2 4.8E-11 1E-15 105.8 7.7 150 129-297 111-264 (505)
207 KOG2615|consensus 99.2 8.6E-11 1.9E-15 95.2 7.8 118 138-267 63-181 (451)
208 PF03092 BT1: BT1 family; Int 99.1 1.1E-10 2.4E-15 100.6 7.6 280 8-301 120-417 (433)
209 TIGR02718 sider_RhtX_FptX side 99.1 6.2E-10 1.3E-14 95.4 12.0 175 109-298 3-185 (390)
210 KOG2532|consensus 99.1 1.8E-10 3.9E-15 99.3 7.8 153 137-302 67-221 (466)
211 PRK10429 melibiose:sodium symp 99.1 1.4E-09 3E-14 95.5 12.9 176 111-295 10-199 (473)
212 TIGR00889 2A0110 nucleoside tr 99.1 1.5E-09 3.2E-14 93.7 12.7 164 111-296 6-179 (418)
213 PF13347 MFS_2: MFS/sugar tran 99.1 5.7E-10 1.2E-14 96.7 10.0 175 116-299 10-200 (428)
214 TIGR00883 2A0106 metabolite-pr 99.1 2.3E-09 4.9E-14 91.8 13.1 128 154-292 46-186 (394)
215 PRK09669 putative symporter Ya 99.1 8.6E-10 1.9E-14 96.1 10.5 175 112-296 14-203 (444)
216 PF03825 Nuc_H_symport: Nucleo 99.1 2.6E-09 5.6E-14 90.9 12.7 138 111-260 6-143 (400)
217 COG0738 FucP Fucose permease [ 99.1 3.6E-09 7.7E-14 86.9 12.7 163 124-297 29-210 (422)
218 KOG3762|consensus 99.0 8.5E-09 1.8E-13 87.5 12.3 180 102-297 366-547 (618)
219 KOG2504|consensus 99.0 3.3E-09 7.1E-14 92.7 9.2 173 110-298 45-222 (509)
220 PRK11462 putative transporter; 99.0 1.4E-08 3.1E-13 88.7 13.0 175 112-295 14-202 (460)
221 PF06813 Nodulin-like: Nodulin 98.9 5.6E-09 1.2E-13 82.1 8.9 138 119-268 14-157 (250)
222 TIGR00788 fbt folate/biopterin 98.9 1.8E-08 3.8E-13 88.2 12.4 181 107-298 26-210 (468)
223 COG2211 MelB Na+/melibiose sym 98.9 5.4E-08 1.2E-12 82.9 14.1 183 111-299 16-209 (467)
224 KOG0254|consensus 98.9 5E-08 1.1E-12 86.6 13.8 139 144-296 90-229 (513)
225 KOG0255|consensus 98.9 3.4E-09 7.3E-14 94.4 6.1 139 138-293 113-251 (521)
226 COG3104 PTR2 Dipeptide/tripept 98.8 3.2E-07 6.9E-12 77.8 14.9 288 2-298 143-488 (498)
227 PF06963 FPN1: Ferroportin1 (F 98.8 1.6E-06 3.5E-11 74.0 19.0 247 6-261 143-411 (432)
228 PRK09848 glucuronide transport 98.7 2.2E-07 4.7E-12 81.2 13.5 63 111-173 12-74 (448)
229 KOG2533|consensus 98.7 7.5E-08 1.6E-12 83.6 9.9 153 136-299 74-229 (495)
230 KOG2325|consensus 98.7 8E-08 1.7E-12 82.0 9.1 272 2-297 155-475 (488)
231 COG2807 CynX Cyanate permease 98.7 6.8E-07 1.5E-11 72.7 13.6 156 125-296 30-185 (395)
232 KOG0569|consensus 98.7 7.7E-08 1.7E-12 82.6 8.6 139 146-298 63-206 (485)
233 TIGR00926 2A1704 Peptide:H+ sy 98.6 5.2E-07 1.1E-11 81.3 12.8 167 122-298 2-183 (654)
234 PF12832 MFS_1_like: MFS_1 lik 98.6 1.4E-07 3E-12 59.8 6.5 65 111-176 4-68 (77)
235 PF01770 Folate_carrier: Reduc 98.6 7.1E-06 1.5E-10 69.0 16.7 249 4-261 121-395 (412)
236 PF00083 Sugar_tr: Sugar (and 98.5 3.3E-09 7.2E-14 92.7 -4.1 142 144-297 47-192 (451)
237 PF05631 DUF791: Protein of un 98.5 7.1E-06 1.5E-10 67.2 15.2 166 120-299 47-218 (354)
238 KOG2325|consensus 98.5 1.4E-06 3.1E-11 74.5 10.8 183 108-302 35-234 (488)
239 KOG3810|consensus 98.5 4.1E-06 8.8E-11 67.7 12.5 282 4-298 122-422 (433)
240 KOG0252|consensus 98.5 3E-07 6.5E-12 77.0 5.6 112 140-262 81-200 (538)
241 KOG2816|consensus 98.4 6E-06 1.3E-10 71.4 13.5 132 153-302 72-204 (463)
242 PF11700 ATG22: Vacuole efflux 98.4 1.3E-05 2.9E-10 69.9 14.3 145 146-299 73-249 (477)
243 KOG0253|consensus 98.3 5.4E-06 1.2E-10 67.8 10.0 158 125-298 95-252 (528)
244 PF07672 MFS_Mycoplasma: Mycop 98.3 1.9E-05 4.2E-10 61.6 12.1 102 8-120 2-107 (267)
245 PF03092 BT1: BT1 family; Int 98.3 4.3E-06 9.3E-11 72.4 9.4 159 131-299 13-177 (433)
246 PF02487 CLN3: CLN3 protein; 98.2 4.7E-05 1E-09 64.1 13.4 241 12-264 143-393 (402)
247 KOG2563|consensus 98.2 3.2E-05 7E-10 65.0 11.8 156 131-299 68-237 (480)
248 TIGR00880 2_A_01_02 Multidrug 98.2 3.5E-06 7.5E-11 60.6 5.4 64 2-66 77-140 (141)
249 PF03209 PUCC: PUCC protein; 98.2 3.4E-05 7.3E-10 64.4 11.5 123 135-268 7-151 (403)
250 TIGR00769 AAA ADP/ATP carrier 98.2 0.00086 1.9E-08 58.3 20.2 167 2-176 155-336 (472)
251 KOG3098|consensus 98.0 0.00031 6.7E-09 60.4 13.6 152 102-264 235-410 (461)
252 PF01770 Folate_carrier: Reduc 97.8 0.0012 2.7E-08 55.8 14.1 163 124-300 20-185 (412)
253 PF06963 FPN1: Ferroportin1 (F 97.7 0.003 6.6E-08 54.3 16.1 180 108-294 3-197 (432)
254 TIGR00769 AAA ADP/ATP carrier 97.7 0.0019 4.2E-08 56.2 14.9 147 107-266 7-189 (472)
255 PF06779 DUF1228: Protein of u 97.6 0.0002 4.4E-09 45.9 5.8 77 120-207 5-81 (85)
256 PF05631 DUF791: Protein of un 97.6 0.00091 2E-08 55.2 11.0 146 5-169 155-304 (354)
257 PF03219 TLC: TLC ATP/ADP tran 97.6 0.002 4.3E-08 56.4 13.4 167 2-176 170-352 (491)
258 PRK03612 spermidine synthase; 97.4 0.0046 1E-07 54.9 13.5 146 114-267 21-170 (521)
259 COG0477 ProP Permeases of the 97.4 0.0026 5.6E-08 52.1 11.5 151 122-286 17-174 (338)
260 KOG3574|consensus 97.4 0.0018 4E-08 53.6 9.8 165 99-268 257-431 (510)
261 COG2270 Permeases of the major 97.4 0.00098 2.1E-08 56.0 8.3 164 126-298 34-221 (438)
262 KOG3626|consensus 97.4 0.0026 5.7E-08 57.6 11.0 168 125-302 114-348 (735)
263 COG3202 ATP/ADP translocase [E 97.3 0.019 4.1E-07 49.5 15.1 167 2-174 174-353 (509)
264 KOG4332|consensus 97.2 0.03 6.4E-07 44.5 13.6 179 100-293 241-427 (454)
265 PF03137 OATP: Organic Anion T 97.2 5.8E-05 1.3E-09 67.0 -1.4 171 121-301 16-254 (539)
266 TIGR01272 gluP glucose/galacto 97.1 0.0015 3.3E-08 54.1 7.0 87 209-296 13-112 (310)
267 KOG0637|consensus 97.1 0.0016 3.5E-08 55.2 6.7 71 106-176 278-365 (498)
268 PF05978 UNC-93: Ion channel r 97.1 0.014 3E-07 42.7 10.7 106 148-265 42-148 (156)
269 KOG0637|consensus 97.1 0.0037 8E-08 53.1 8.2 148 107-264 32-201 (498)
270 KOG3762|consensus 97.0 0.00033 7.1E-09 60.5 1.7 62 115-177 19-80 (618)
271 PF13000 Acatn: Acetyl-coenzym 97.0 0.02 4.3E-07 49.5 12.1 160 102-268 273-467 (544)
272 PF00854 PTR2: POT family; In 96.6 0.018 3.9E-07 49.1 9.4 109 187-299 5-125 (372)
273 TIGR00939 2a57 Equilibrative N 96.4 0.24 5.1E-06 43.3 14.8 29 233-261 399-427 (437)
274 KOG3574|consensus 96.3 0.1 2.2E-06 43.8 11.4 146 107-265 31-192 (510)
275 KOG1237|consensus 96.1 0.11 2.3E-06 46.9 11.6 175 109-297 39-245 (571)
276 TIGR00926 2A1704 Peptide:H+ sy 95.8 1.4 3.1E-05 40.7 17.5 54 9-62 121-180 (654)
277 PF02487 CLN3: CLN3 protein; 95.8 0.15 3.3E-06 43.5 10.4 167 110-294 3-192 (402)
278 KOG1479|consensus 95.6 0.13 2.8E-06 43.7 9.4 45 124-168 260-308 (406)
279 KOG4686|consensus 95.3 0.0042 9.1E-08 49.6 -0.4 151 108-268 42-198 (459)
280 PF03219 TLC: TLC ATP/ADP tran 95.2 0.71 1.5E-05 40.9 13.1 41 227-267 164-205 (491)
281 KOG3880|consensus 94.4 0.13 2.9E-06 41.7 5.9 58 12-69 146-204 (409)
282 KOG3098|consensus 94.2 2.7 5.8E-05 36.9 13.9 111 144-266 50-162 (461)
283 KOG1479|consensus 94.0 3.6 7.9E-05 35.2 14.5 65 107-173 18-82 (406)
284 PF13000 Acatn: Acetyl-coenzym 94.0 0.73 1.6E-05 40.3 9.8 69 110-178 3-75 (544)
285 KOG4332|consensus 93.9 0.035 7.6E-07 44.1 1.8 44 133-176 62-105 (454)
286 COG3202 ATP/ADP translocase [E 93.8 3.1 6.7E-05 36.5 13.2 149 107-268 27-210 (509)
287 KOG1237|consensus 92.8 7.2 0.00016 35.5 14.7 46 10-56 192-237 (571)
288 KOG2601|consensus 92.3 2.8 6.1E-05 35.5 10.4 70 107-176 27-96 (503)
289 PF06813 Nodulin-like: Nodulin 91.8 3.4 7.4E-05 33.0 10.3 64 3-69 123-186 (250)
290 PF01733 Nucleoside_tran: Nucl 91.6 0.042 9.2E-07 45.5 -0.6 30 233-262 275-304 (309)
291 PF07857 DUF1632: CEO family ( 89.4 9.8 0.00021 30.5 11.9 23 115-137 186-208 (254)
292 PF00854 PTR2: POT family; In 88.6 0.49 1.1E-05 40.4 3.5 50 8-58 68-117 (372)
293 COG5336 Uncharacterized protei 88.1 2.9 6.2E-05 28.0 5.8 32 240-271 40-71 (116)
294 KOG4830|consensus 87.8 1 2.2E-05 35.9 4.3 70 94-163 188-257 (412)
295 TIGR00939 2a57 Equilibrative N 87.2 16 0.00034 32.2 11.8 19 221-239 120-138 (437)
296 PF02990 EMP70: Endomembrane p 85.3 28 0.00061 31.4 14.2 31 140-170 290-320 (521)
297 PF11947 DUF3464: Protein of u 83.9 5.3 0.00011 29.0 6.0 30 228-257 116-145 (153)
298 COG2962 RarD Predicted permeas 83.6 19 0.00042 29.2 9.6 32 100-131 62-93 (293)
299 KOG2881|consensus 80.3 28 0.00061 27.8 12.3 24 153-176 250-273 (294)
300 PRK13629 threonine/serine tran 74.4 61 0.0013 28.6 15.6 48 6-59 18-65 (443)
301 PF11368 DUF3169: Protein of u 73.2 46 0.001 26.6 9.2 25 11-35 9-33 (248)
302 COG0477 ProP Permeases of the 67.7 8.4 0.00018 31.0 4.1 55 2-56 120-177 (338)
303 COG1457 CodB Purine-cytosine p 66.4 93 0.002 27.4 21.3 148 3-174 12-159 (442)
304 PRK11017 codB cytosine permeas 63.4 1E+02 0.0022 26.9 17.9 54 3-56 2-55 (404)
305 PF02694 UPF0060: Uncharacteri 62.9 9.1 0.0002 25.7 2.6 48 143-200 54-101 (107)
306 KOG3880|consensus 61.9 20 0.00044 29.8 4.9 90 108-207 13-116 (409)
307 PF06645 SPC12: Microsomal sig 59.9 20 0.00043 22.6 3.7 32 256-293 21-52 (76)
308 PF06027 DUF914: Eukaryotic pr 59.9 77 0.0017 26.8 8.2 21 275-295 285-305 (334)
309 PRK15015 carbon starvation pro 59.5 1.5E+02 0.0033 27.6 16.2 35 3-43 79-114 (701)
310 PRK02237 hypothetical protein; 58.7 17 0.00037 24.5 3.3 47 144-200 57-103 (109)
311 KOG4830|consensus 58.0 8 0.00017 31.1 2.0 64 112-176 22-94 (412)
312 PF08611 DUF1774: Fungal prote 57.8 51 0.0011 21.9 5.3 21 274-294 51-71 (97)
313 PRK10263 DNA translocase FtsK; 55.8 1.1E+02 0.0024 31.1 9.4 23 151-173 60-82 (1355)
314 PF10183 ESSS: ESSS subunit of 55.1 20 0.00044 24.3 3.4 29 40-68 57-85 (105)
315 PF01102 Glycophorin_A: Glycop 54.9 15 0.00032 25.6 2.7 12 290-301 82-93 (122)
316 COG5336 Uncharacterized protei 54.3 52 0.0011 22.3 5.0 22 154-175 53-74 (116)
317 PF05255 UPF0220: Uncharacteri 53.7 91 0.002 23.2 9.2 56 3-58 13-73 (166)
318 PTZ00370 STEVOR; Provisional 53.3 13 0.00028 30.0 2.5 34 273-306 255-288 (296)
319 PF03547 Mem_trans: Membrane t 52.8 94 0.002 26.7 8.0 18 153-170 5-22 (385)
320 PF12273 RCR: Chitin synthesis 51.7 8.6 0.00019 27.2 1.3 20 43-62 1-20 (130)
321 TIGR01478 STEVOR variant surfa 51.6 17 0.00037 29.3 2.9 34 273-306 259-292 (295)
322 PF07172 GRP: Glycine rich pro 51.4 29 0.00062 23.0 3.5 6 279-284 6-11 (95)
323 PF02554 CstA: Carbon starvati 50.6 1.6E+02 0.0035 25.2 14.8 38 3-46 48-86 (376)
324 PRK03612 spermidine synthase; 49.0 43 0.00094 30.3 5.5 52 10-61 143-194 (521)
325 PF04226 Transgly_assoc: Trans 48.2 50 0.0011 18.6 5.7 39 23-62 6-44 (48)
326 KOG3097|consensus 47.9 1.2E+02 0.0025 25.8 7.1 63 107-176 29-91 (390)
327 PF13940 Ldr_toxin: Toxin Ldr, 43.8 40 0.00087 17.2 2.5 20 150-169 15-34 (35)
328 COG1288 Predicted membrane pro 43.6 1.9E+02 0.0042 25.5 8.0 33 39-71 215-248 (481)
329 TIGR02230 ATPase_gene1 F0F1-AT 42.9 1E+02 0.0022 20.7 6.5 37 14-51 45-85 (100)
330 KOG3810|consensus 42.4 82 0.0018 27.0 5.5 122 165-300 64-186 (433)
331 PF06779 DUF1228: Protein of u 41.1 99 0.0021 20.0 6.3 42 13-55 28-69 (85)
332 KOG1278|consensus 40.0 22 0.00048 31.8 2.1 31 140-170 356-386 (628)
333 PF13536 EmrE: Multidrug resis 39.9 1.2E+02 0.0026 20.6 6.4 16 187-202 91-106 (113)
334 PRK12489 anaerobic C4-dicarbox 39.7 2.7E+02 0.0059 24.7 9.1 22 155-176 279-300 (443)
335 PF11511 RhodobacterPufX: Intr 39.6 56 0.0012 19.9 3.1 30 41-70 29-58 (67)
336 PF04024 PspC: PspC domain; I 39.4 43 0.00093 20.0 2.7 27 42-68 31-60 (61)
337 PF15061 DUF4538: Domain of un 38.8 76 0.0017 18.7 3.5 24 40-63 3-26 (58)
338 KOG1277|consensus 38.7 36 0.00079 29.7 3.1 30 145-174 325-358 (593)
339 COG1585 Membrane protein impli 38.3 1.5E+02 0.0033 21.3 6.2 27 40-66 45-71 (140)
340 PF04277 OAD_gamma: Oxaloaceta 37.0 1.1E+02 0.0023 19.2 4.6 15 275-289 12-26 (79)
341 PF06783 UPF0239: Uncharacteri 36.2 89 0.0019 20.1 3.8 21 276-296 23-43 (85)
342 PF11833 DUF3353: Protein of u 34.8 1.7E+02 0.0036 22.5 5.9 30 8-37 137-166 (194)
343 PF01914 MarC: MarC family int 34.7 2.2E+02 0.0047 22.1 6.7 16 277-292 70-85 (203)
344 COG4262 Predicted spermidine s 33.5 3.2E+02 0.0069 23.6 10.8 31 138-168 38-68 (508)
345 PF05545 FixQ: Cbb3-type cytoc 33.1 57 0.0012 18.3 2.5 7 293-299 27-33 (49)
346 PF04281 Tom22: Mitochondrial 30.4 62 0.0013 23.1 2.8 26 1-26 60-85 (137)
347 TIGR02978 phageshock_pspC phag 29.3 1.4E+02 0.003 20.9 4.3 29 42-70 31-64 (121)
348 PHA02692 hypothetical protein; 29.1 1.3E+02 0.0027 18.6 3.5 25 40-64 43-67 (70)
349 PF13073 DUF3937: Protein of u 28.9 1.3E+02 0.0028 18.0 3.4 37 104-140 2-38 (73)
350 KOG2601|consensus 28.8 91 0.002 27.0 3.9 40 228-268 407-447 (503)
351 PF07857 DUF1632: CEO family ( 28.2 3.2E+02 0.0068 22.2 6.7 23 277-299 116-138 (254)
352 PF14362 DUF4407: Domain of un 28.1 1.5E+02 0.0032 24.6 5.1 22 6-27 8-29 (301)
353 PF11151 DUF2929: Protein of u 28.1 1.3E+02 0.0029 17.6 6.2 40 21-61 11-50 (57)
354 COG3162 Predicted membrane pro 27.8 1.9E+02 0.0041 19.3 5.7 40 98-137 13-54 (102)
355 COG1983 PspC Putative stress-r 27.5 1.3E+02 0.0028 18.6 3.4 16 54-69 50-65 (70)
356 TIGR03144 cytochr_II_ccsB cyto 27.2 3.2E+02 0.007 21.8 9.8 13 136-148 179-191 (243)
357 TIGR00814 stp serine transport 26.9 4.3E+02 0.0093 23.1 14.6 26 6-31 2-27 (397)
358 PF10639 UPF0546: Uncharacteri 26.8 1.5E+02 0.0032 20.5 4.0 25 100-124 35-59 (113)
359 PF07672 MFS_Mycoplasma: Mycop 26.5 76 0.0016 25.7 2.9 58 240-299 4-64 (267)
360 PF13829 DUF4191: Domain of un 25.4 2.5E+02 0.0053 22.2 5.4 38 15-56 28-65 (224)
361 COG2851 CitM H+/citrate sympor 24.8 4.6E+02 0.01 22.7 7.4 50 126-175 153-204 (433)
362 PF09911 DUF2140: Uncharacteri 24.3 50 0.0011 25.1 1.6 15 41-55 2-16 (187)
363 COG4698 Uncharacterized protei 24.2 83 0.0018 23.6 2.5 16 42-57 11-26 (197)
364 PRK10697 DNA-binding transcrip 24.1 2E+02 0.0044 20.0 4.3 18 53-70 52-69 (118)
365 COG0598 CorA Mg2+ and Co2+ tra 24.0 1.1E+02 0.0024 25.6 3.8 27 40-66 292-318 (322)
366 PF04341 DUF485: Protein of un 23.9 2.2E+02 0.0047 18.6 6.9 49 100-148 7-57 (91)
367 PF01405 PsbT: Photosystem II 23.8 1.1E+02 0.0024 15.1 2.8 11 59-69 18-28 (29)
368 TIGR00986 3a0801s05tom22 mitoc 23.2 96 0.0021 22.3 2.6 23 2-24 59-81 (145)
369 PF13493 DUF4118: Domain of un 23.2 2.3E+02 0.0049 18.7 4.6 22 152-173 84-105 (105)
370 TIGR03732 lanti_perm_MutE lant 21.9 4.1E+02 0.009 21.1 12.5 18 156-173 136-153 (241)
371 COG4736 CcoQ Cbb3-type cytochr 21.6 1.3E+02 0.0029 18.0 2.6 10 291-300 25-34 (60)
372 TIGR00383 corA magnesium Mg(2+ 21.3 2.5E+02 0.0055 23.3 5.4 26 40-65 288-313 (318)
373 PRK10921 twin-arginine protein 21.2 1.8E+02 0.0039 23.6 4.2 11 289-299 229-239 (258)
374 PHA03049 IMV membrane protein; 21.0 2.1E+02 0.0046 17.4 4.0 17 283-299 10-26 (68)
375 CHL00031 psbT photosystem II p 20.9 1.4E+02 0.003 15.2 3.1 23 45-70 7-29 (33)
376 PF03741 TerC: Integral membra 20.6 3.9E+02 0.0084 20.3 13.5 46 3-51 23-68 (183)
377 PF02532 PsbI: Photosystem II 20.3 1.5E+02 0.0032 15.4 4.2 24 48-71 8-31 (36)
378 MTH00057 ND6 NADH dehydrogenas 20.3 1.4E+02 0.003 22.7 3.3 28 274-301 141-168 (186)
379 PF05961 Chordopox_A13L: Chord 20.2 2.2E+02 0.0049 17.4 4.3 16 284-299 11-26 (68)
380 PRK11588 hypothetical protein; 20.2 6.7E+02 0.014 22.9 8.5 14 40-53 229-242 (506)
381 PRK11588 hypothetical protein; 20.1 5.1E+02 0.011 23.6 7.0 22 44-66 17-38 (506)
382 PF03596 Cad: Cadmium resistan 20.0 4.1E+02 0.0089 20.4 7.2 12 125-136 112-123 (191)
No 1
>KOG2532|consensus
Probab=100.00 E-value=3.5e-34 Score=244.12 Aligned_cols=306 Identities=44% Similarity=0.803 Sum_probs=272.5
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
.++|.|++||++..++..++..+|.+++-++++++.+...||+++|++.++++++..++.+++..|+|++++..+++|.+
T Consensus 153 ~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~ 232 (466)
T KOG2532|consen 153 LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELK 232 (466)
T ss_pred eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHH
Confidence 36899999999999999999999999999999999987689999999999999999999999999999999999999998
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
.+++...+++.+++ .+.|++++++++.+|.+++..++...+++.+..|+|.|+++++|++..+.|++.+++.+...+..
T Consensus 233 ~I~~~k~~~~~~~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k 311 (466)
T KOG2532|consen 233 YIEKGKSEAHVKKK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVK 311 (466)
T ss_pred HHHhcccccccCCC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHH
Confidence 88877666554322 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
+++|.++||..+| .+.....||.+..++....++.++.+.+.+.... ..+.++.+..+..+...........+..|++
T Consensus 312 ~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~ 390 (466)
T KOG2532|consen 312 FVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH 390 (466)
T ss_pred HHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchH
Confidence 9999999999998 7777888999999999999999999998886444 5666666777777777777777777778999
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCC
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWNDSEY 309 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (318)
.+..+|+.+....+.++++|.+.|.+... ++...|+.+|++.+++.+++.+.+.++.+.+++++.+.++
T Consensus 391 a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~~ 459 (466)
T KOG2532|consen 391 AGFVMGIINFVGALAGFIAPLLVGIIVTD-NTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSEE 459 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeEeCC-CCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCcc
Confidence 99999999999999999999999999963 2457999999999999999998888887777777766433
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=227.48 Aligned_cols=287 Identities=19% Similarity=0.254 Sum_probs=224.1
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHH--HHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVA--GLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE 78 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (318)
++.|+|++|||+..++++++-++|..+.|++. +.+..+ .+||..|++.++++++.+++.++..+|+|++..-.+.+|
T Consensus 142 i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~-~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~ 220 (448)
T COG2271 142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH-GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEE 220 (448)
T ss_pred HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHH
Confidence 46799999999999999999999999999999 888887 899999999999999999999999999998654333222
Q ss_pred hhhhhhccCccccc---cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHH
Q psy4758 79 RIYIETSLVHSSTV---SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLA 155 (318)
Q Consensus 79 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~ 155 (318)
-+....+..+++++ -...+.-.+-+++||.+|.+++.+.+.+..-+++..|.|.|+.|..|+|..+++...+.+-.+
T Consensus 221 ~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~a 300 (448)
T COG2271 221 YRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVA 300 (448)
T ss_pred hhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 21111111011110 011223345578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHHHHHhhhcccccccccc
Q psy4758 156 QWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 156 ~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
+++|++++||++||+-+.+ |....++.++...+++..+...++... ..++++.+|+...+.. ........
T Consensus 301 gl~G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~ 372 (448)
T COG2271 301 GLPGTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAA 372 (448)
T ss_pred hhHHHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHh
Confidence 9999999999999986333 222346666667777777777766533 4444555555555544 44445566
Q ss_pred ccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 234 DLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 234 ~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
|..|.+ .|++.|+...+.++ |.+.+....|++.|. .+|...|++..+..+++.++.....+.+
T Consensus 373 e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~----~gW~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 373 EFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT----WGWDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred ccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec----CCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 888888 99999999999999 888999999999998 7899999998888888877776655443
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4.1e-31 Score=230.71 Aligned_cols=303 Identities=38% Similarity=0.696 Sum_probs=222.7
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPW-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (318)
++||+|+++|++++++...+..+|.++++++++.+.+. . |||+.|++.++++++..++.+.+.+|+|+++++.+++|+
T Consensus 156 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~-~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (465)
T TIGR00894 156 IVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES-WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK 234 (465)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence 36899999999999999999999999999999999876 5 999999999999888877777777888866555444444
Q ss_pred hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
+..++..+++++ +.+.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..+.++..+...++..++
T Consensus 235 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~ 313 (465)
T TIGR00894 235 KYINSSLQGQKG-STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLC 313 (465)
T ss_pred HHHHhhcccccC-CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHH
Confidence 443332221111 1223456899999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
.+++|+++||+++|+.......++.....+..+..+.........+.....+..+.++.+......+.......+..|+.
T Consensus 314 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 393 (465)
T TIGR00894 314 SIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRF 393 (465)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhH
Confidence 99999999999887655432223333333332222222222222222222333333333333333444445556777888
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWND 306 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (318)
+|.+.|+.+..+++++.++|.+.|.+.|.... .+|..+|.+.++..+++.++.....+.+++++++
T Consensus 394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~-~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~ 459 (465)
T TIGR00894 394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSK-NVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAK 459 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCc-hHHHHHHHHHHHHHHHHHHHeeeeecceecCCCC
Confidence 99999999999999999999999999886322 4588999999888888887776666555555543
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.9e-29 Score=204.97 Aligned_cols=264 Identities=20% Similarity=0.259 Sum_probs=213.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+|..|+++|++++++..++.+++.++|.+++.++.+. +|||++|+..+.++++..+..+..+| |++.++..
T Consensus 127 ~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~-~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~------ 197 (394)
T COG2814 127 ARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-FGWRATFLAIAVLALLALLLLWKLLP--PSEISGSL------ 197 (394)
T ss_pred HHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCC------
Confidence 4678999999999999999999999999999999999 99999999999999999888999998 22111111
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+.+..+..+++|+|.++...+..++...+.+..++|+.+++++..|+|....++....++++.++|+.
T Consensus 198 ------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~ 265 (394)
T COG2814 198 ------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNL 265 (394)
T ss_pred ------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHH
Confidence 11112245789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
++|++.|| +.++.+ .....+..+.++.+.+..++.........+..+..............+..|+.+.
T Consensus 266 ~gGrl~dr-~~~~~l----------~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~ 334 (394)
T COG2814 266 LGGRLADR-GPRRAL----------IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAAD 334 (394)
T ss_pred HHhhhccc-cchhHH----------HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchH
Confidence 99999999 777755 5555666666666666665554333333333333333444445555556678899
Q ss_pred hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
.+.+++....|+|..+|..++|.++|+ .+|....++.+++.+++.++.....+.++
T Consensus 335 ~a~sl~~aa~nlgia~GA~lGG~v~~~----~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 335 LAGSLNVAAFNLGIALGAALGGLVLDA----LGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999 78999999999988888877776655443
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=9.7e-29 Score=215.54 Aligned_cols=284 Identities=13% Similarity=0.153 Sum_probs=195.3
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE 78 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (318)
++||+|+++||+++|+.+.+.++|.++++.+..++.+. ..+||..|.+.++++++.+++.+++.+|+|++.+..++++
T Consensus 147 i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~ 226 (467)
T PRK09556 147 ITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE 226 (467)
T ss_pred HHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh
Confidence 36899999999999999999999999999998777653 1269999999898888877777777788776543322222
Q ss_pred hhhhhhccCccccccccCCcc-----hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758 79 RIYIETSLVHSSTVSSSMKVP-----WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY 153 (318)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~ 153 (318)
. ..+...++++..+.++.+ .++.+|+|.+|...+..++.....++...|+|.|+++.+|+++.+++.......
T Consensus 227 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~ 304 (467)
T PRK09556 227 I--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFE 304 (467)
T ss_pred c--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence 1 000000000000011111 223789999999999999988888889999999999889999999999998899
Q ss_pred HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH--HHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758 154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL--VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
++.+++.+++|+++||+++|+.. .....+..+.. ..+...++.....+..+.++.+..+.... ....
T Consensus 305 ~~~~ig~~~~G~lsDr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~ 373 (467)
T PRK09556 305 IGALVGSLLWGWLSDLANGRRAL----------VACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL-IGVA 373 (467)
T ss_pred HHHHHHHHHHHHHHHHHCCCchH----------HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH-HHHH
Confidence 99999999999999999998754 22222222221 22222222221223333333332222211 1233
Q ss_pred ccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCC--------CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 232 HLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNT--------SVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 232 ~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
..|..|++ +|++.|+.+...++ |++++|.+.|++.|.+. ...+|+..|.+..++.+++.+..+.+.
T Consensus 374 ~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 374 AVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666766 99999999999997 67999999999999110 025799999998888888877766554
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=3.9e-28 Score=209.83 Aligned_cols=282 Identities=17% Similarity=0.203 Sum_probs=188.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+|++|+++|++++++.+.+.++|.++++.+++.+.+. .|||+.|++.++++++..++..+.+||+|++.+....++.+.
T Consensus 137 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 215 (434)
T PRK11663 137 TAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH 215 (434)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence 5889999999999999999999999999999999988 899999999988877766666667788765321111000000
Q ss_pred hhhccCccccccccCCcchh-----hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWK-----AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQ 156 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~ 156 (318)
..++..+++ +..+.+++ ..+++|.+|...+..++.......+..|+|.|+++.+|++..+++...+...+++
T Consensus 216 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 292 (434)
T PRK11663 216 DALELAQQQ---EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGG 292 (434)
T ss_pred cccccchhc---cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 000000000 00111222 2567888998888887777788888899999998778999999999999999999
Q ss_pred HHHHHHHHHhHHHHhh--hcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758 157 WILILVFSWLADYIVA--KQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD 234 (318)
Q Consensus 157 ~~~~~~~g~l~dr~g~--~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
.++.++.|+++||+.+ |+... .....+.....+...... ..+........+.++.+... ..........+
T Consensus 293 ~~g~~~~g~l~dr~~~~~r~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 364 (434)
T PRK11663 293 FIGALVAGWGSDKLFNGNRGPMN------LIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFG-PQMLIGMAAAE 364 (434)
T ss_pred HHHHHHHhhhHHHhccCCccHHH------HHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhh-HHHHHHHHHHh
Confidence 9999999999999943 23210 001112121222222111 11111122222222222111 11122234456
Q ss_pred cCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 235 LSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 235 ~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
..|++ |++++|+.+...++|++++|.+.|++.|. .+|...|+..+++.+++.+..+...++
T Consensus 365 ~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 365 CSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI----WHWTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred cccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh----cccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66554 99999999999999999999999999998 679999999888888877666554433
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=2.1e-27 Score=202.84 Aligned_cols=258 Identities=16% Similarity=0.153 Sum_probs=193.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++|+...+.++|.+++|++++.+.+. .|||+.|++.++++++..+..+..+||.|++++
T Consensus 123 ~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--------- 192 (390)
T PRK03545 123 IRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-LGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS--------- 192 (390)
T ss_pred HHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------
Confidence 5789999999999999999999999999999999887 899999999998888776666666666442211
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
....+.++++|+|.++...+..++.....+....+.|.++++..|+++.+++.......++++++++
T Consensus 193 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~ 259 (390)
T PRK03545 193 -------------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSV 259 (390)
T ss_pred -------------chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHH
Confidence 0012345788999888776666666666677778888898887899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL-SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (318)
+.|++.||+++|+. ..+..+...+...+ ...++........++.+.+... ..+.......+..|+++
T Consensus 260 ~~g~l~dr~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~ 327 (390)
T PRK03545 260 LFSRLGNRHPSGFL-----------LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMC-IGLAMQVKVLKLAPDAT 327 (390)
T ss_pred HHHHHhhccchhHH-----------HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhc-chHHHHHHHHHhCCCcH
Confidence 99999999987753 23333333333332 2223222233333444444322 23334455556778789
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
++++|+.+...++|..+||.+.|.+.|. .+++..+...+.+.+++.+......+
T Consensus 328 ~~~~g~~~~~~~~g~~~G~~~~G~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 328 DVAMALFSGIFNIGIGAGALLGNQVSLH----LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999 78899999998888888777766654
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=1e-26 Score=198.94 Aligned_cols=284 Identities=21% Similarity=0.354 Sum_probs=201.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+....+|.++++.+++.+.+. .+||+.|++.+++.++..++..+..||+|++++..++++++.
T Consensus 108 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (399)
T TIGR00893 108 ASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI 186 (399)
T ss_pred HHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhh
Confidence 5889999999999999999999999999999998887 899999999998888776777777777765443333332222
Q ss_pred hhhccCc---cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 82 IETSLVH---SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 82 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
..+.... +++.++..+...++.+++|+++...+..++..........+.|.|+++.+|.++.+.+.......+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (399)
T TIGR00893 187 VVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFI 266 (399)
T ss_pred cchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHH
Confidence 1111111 1111123345677889999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (318)
+.++.|++.||+++|+...... ......+..+..+....... .+..........++.+..+ ..+....+..|..|+
T Consensus 267 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 342 (399)
T TIGR00893 267 GMILGGRLSDLLLRRGKSLVFA--RKTAIIAGLVLSLLMFATNY-VNIPYAALALVALGFFGLG-AGAIGWALISDNAPG 342 (399)
T ss_pred HHHHHHHHHHHHhhcccchhHH--HHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh
Confidence 9999999999999996221100 00001111111111111111 1122122223333333333 455566666677776
Q ss_pred c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccc-hHHHHHHHHHHHHHHHHHHH
Q psy4758 239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 294 (318)
+ |+++.|+.+...++|+.++|.+.|.+.|. .+ |...+.+.+++.+++.+...
T Consensus 343 ~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 343 NIAGLTGGLINSLGNLGGIVGPIVIGAIAAT----TGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhHHhhhhccC----CCchhHHHHHHHHHHHHHHHHHH
Confidence 6 99999999999999999999999999998 45 88888888877777666554
No 9
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.3e-27 Score=191.64 Aligned_cols=267 Identities=15% Similarity=0.191 Sum_probs=218.6
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC---chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG---WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLE 77 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g---Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (318)
+++|||||++|.++|+.. ..++|..+..+++..+... .+ ||..-.+..+..++..++.++...|.|+.++..++.
T Consensus 129 ~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~ 206 (417)
T COG2223 129 ASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQ 206 (417)
T ss_pred ccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccccc
Confidence 478999999999999999 9999999999999999887 78 999999999888888888999988887642221111
Q ss_pred HhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHH
Q psy4758 78 ERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQW 157 (318)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~ 157 (318)
.+..++.++++|+.|.+++.++..+.++.++..++|.|+++++|.++.++|.......+.+.
T Consensus 207 ------------------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~ 268 (417)
T COG2223 207 ------------------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGA 268 (417)
T ss_pred ------------------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH
Confidence 11446788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC------chhHHHHHHHHHHHHHhhhcccccccc
Q psy4758 158 ILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG------DNLVGAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 158 ~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
+.++.+|+++||+|.+|.. ...+..++++........ .........++....+.+.........
T Consensus 269 l~Rp~GG~LsDR~Gg~rv~----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~ 338 (417)
T COG2223 269 LARPLGGWLSDRIGGRRVT----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKM 338 (417)
T ss_pred HHHhccchhhhhccchhHH----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheee
Confidence 9999999999999999976 555666666655555543 122233333333444455566677777
Q ss_pred ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
+...+|++.|.+.|+....+++|++.-|...+...+.+ .++...|++...+.+++.+..+....++
T Consensus 339 Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t---g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 339 IPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT---GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred chHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77888999999999999999999999999999999996 4689999999999998888877766554
No 10
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=4e-27 Score=204.54 Aligned_cols=289 Identities=16% Similarity=0.170 Sum_probs=187.9
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHH-hHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNL-VTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
.|++|+++|++++|+++.+.++|.. .+|+++..+... .+||+.|++.++++++..++..+++||+|++....++++.+
T Consensus 146 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (452)
T PRK11273 146 VHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK 224 (452)
T ss_pred HHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh
Confidence 4789999999999999999999875 455544444444 69999999999888887777778888877643221111110
Q ss_pred h-hhhccCccccccccCCcc-hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 81 Y-IETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
. ..+..++++.+..+.+.. .+.++|+|.+|...+..++.....+....|+|.|++++.|++..+++.......++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~ 304 (452)
T PRK11273 225 NDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIP 304 (452)
T ss_pred hccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 0 000000000000000111 12367889999988888888888888899999999998899989999888888899999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-chhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+.++.|+++||+++++... .......+..++...+.... ++.. .....+.++...... .........+..
T Consensus 305 g~~~~G~l~dr~~~~r~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~ 376 (452)
T PRK11273 305 GTLLCGWMSDKVFRGNRGA-------TGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP-VMLIGLHALELA 376 (452)
T ss_pred HHHHHHHHHHHHccCCcch-------HHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH-HHHHHHHHHHHc
Confidence 9999999999995432110 01122222223332222222 1221 222223333322221 112223344566
Q ss_pred ccc-hhhHHHHHHHHHHHHHhH-hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCC
Q psy4758 237 PNF-AGTLMGFTNGCANIASIL-GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQP 303 (318)
Q Consensus 237 ~~~-~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (318)
|++ ||+++|+.+...++|+.+ +|.+.|.+.|. .+|+..|.+.+++++++++....+.+.++++
T Consensus 377 p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 377 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH----hcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 655 999999999999998765 79999999998 6789999988888888877777665554443
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=5e-27 Score=201.35 Aligned_cols=271 Identities=14% Similarity=0.211 Sum_probs=184.2
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-----CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-----PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISL 76 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-----~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (318)
+||+|+++|++++++++.+.++|.++++++++++.+. ..|||+.|++.++++++..++.++++||+|++.+..++
T Consensus 122 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~ 201 (412)
T TIGR02332 122 TFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE 201 (412)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH
Confidence 6899999999999999999999999999999988641 26999999999998888777778888998876544333
Q ss_pred hHhhhhhhccCcc------cccc-ccC----CcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-hcceeec
Q psy4758 77 EERIYIETSLVHS------STVS-SSM----KVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV-LQFDIKS 144 (318)
Q Consensus 77 ~~~~~~~~~~~~~------~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~~~~~ 144 (318)
++++...+..+.+ ++.. ++. +..+++++ +|.+|...+..++.....+.+.+|+|.++++. .|+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~ 280 (412)
T TIGR02332 202 EDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM 280 (412)
T ss_pred HHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Confidence 3322211111000 0000 011 12244444 57888888888888888999999999999872 4678888
Q ss_pred hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhc
Q psy4758 145 NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGT 224 (318)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (318)
++.+.....++.+++.+++|+++||+++|+... .....+..+++.+....++.............+... .
T Consensus 281 ~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 350 (412)
T TIGR02332 281 IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT---------ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFS-A 350 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh-h
Confidence 899999999999999999999999999776321 222233333332222222222111111111222111 1
Q ss_pred cccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758 225 YTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF 286 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 286 (318)
.+.......+..|++ |++++|+.+...++|++++|.+.|.+.|.. .+|+..+.+.+++.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~---g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 351 MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT---GSFNSGLWFVAALL 410 (412)
T ss_pred hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC---CCCchhHHHHHHHH
Confidence 222333434555554 999999999999999999999999999984 35888887666543
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=1.8e-26 Score=194.13 Aligned_cols=258 Identities=14% Similarity=0.025 Sum_probs=183.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+||+|+|+|++++++.+.+..+|.+++++++.++.+. .|||+.|++.++++++..++.++.+||+|+++++..+.
T Consensus 104 ~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~---- 178 (368)
T TIGR00903 104 ASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-GGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGF---- 178 (368)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcch----
Confidence 5789999999999999999999999999999999987 99999999999998888788888899987543211000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++...++++++|||.+|...+..++....++++.+|+|.|+++ .|++.. .+.......+.+.++
T Consensus 179 ------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g-- 242 (368)
T TIGR00903 179 ------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG-- 242 (368)
T ss_pred ------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH--
Confidence 0001247789999999999999999999999999999999987 678754 555555545544444
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (318)
.++++||..||+. |+........+.++....+....+.. ....+..+..++.....+....+..|.+|++ |
T Consensus 243 -~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~r 314 (368)
T TIGR00903 243 -VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFELNRL-ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELH 314 (368)
T ss_pred -HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHccccH-HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhc
Confidence 5788888866531 11111222333333333444333322 2222333333333334445666777888887 9
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+++.|+.+..+++++..+|.+.+.+.. +....|.+.++..+++.+...
T Consensus 315 gt~~G~~~~~g~~~~~~~~~~~~~~~~------~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 315 GKAAGAIGFTSRAISVALALAAMLFIS------SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987763 346677777777777766654
No 13
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=5.8e-26 Score=198.09 Aligned_cols=278 Identities=14% Similarity=0.067 Sum_probs=184.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh----CC----CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA----GS----PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF 73 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~----~~----~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (318)
+||+|+++|++++|+.+...++|..+++.+.+.+. +. ..|||+.|++.++++++..++.+++.++.|+++
T Consensus 149 ~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~-- 226 (476)
T PLN00028 149 STMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN-- 226 (476)
T ss_pred HHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--
Confidence 58899999999999998777777777766555442 11 148999999999988877666665554544321
Q ss_pred CChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758 74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY 153 (318)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~ 153 (318)
.++.+++ .+.++ ......+++.++++++|.+.+..++.....+.+..++|.|+.+.+|+++.+++.+.+...
T Consensus 227 ~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~ 298 (476)
T PLN00028 227 YRELKKS------GTMPK--DSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFG 298 (476)
T ss_pred hhhHHhc------Ccccc--ccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 1110000 00000 111134566788899988888777777777778889999998878999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758 154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
++++++++++|+++||+++|+.... |+........+.++....+...++.......+++.+.+... ..+.......
T Consensus 299 ~~~~ig~~~~G~lsDr~~~r~~~~~---r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 374 (476)
T PLN00028 299 LMNLFARPAGGYLSDVAARRFGMRG---RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQA-ACGATFGIVP 374 (476)
T ss_pred HHHHHHHhhhHHHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-hhhhhcccCc
Confidence 9999999999999999998753311 23333344444444444444333322222222233332222 2333444555
Q ss_pred ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
++.|+++|++.|+.+...++|+.++|.+.+ . .+..+|...|++.+++.+++.++.++.+.
T Consensus 375 ~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~----~-~~~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 375 FVSRRSLGVISGLTGAGGNVGAVLTQLLFF----T-GSSYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred ccChhhchhhhhhhhccccHHHHHHHHHHH----h-cCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence 777878999999998888888888877754 1 11257899999999888888877776653
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=6.9e-26 Score=194.67 Aligned_cols=264 Identities=17% Similarity=0.194 Sum_probs=184.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+.+..+|..+++.++..+.+. .+||+.|++.++..++..++...++||+|+..+..++++
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--- 204 (406)
T PRK11551 129 SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK--- 204 (406)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch---
Confidence 5889999999999999999999999999999888887 899999999887777666666667788664321110000
Q ss_pred hhhccCccccccccCCcchhhhhc---chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILT---SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
.++...+..++ ++..+...+..++.....+....|.|.++++ .|+++.+.+.......++.++
T Consensus 205 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~ 270 (406)
T PRK11551 205 -------------QRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGAL 270 (406)
T ss_pred -------------hhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHH
Confidence 00011112222 2333444445555556667778899999988 799999999999999999999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (318)
+.++.|++.||+++|+.+ ..+.+...+++..+...++........+..+.+... ..+.......+..|+
T Consensus 271 ~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~ 339 (406)
T PRK11551 271 GSLLIGALMDRLRPRRVV----------LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVG-GQSVLYALAPLFYPT 339 (406)
T ss_pred HHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHcch
Confidence 999999999999998865 334444444544444444433233333333333333 334444455566666
Q ss_pred c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+ |+++.|+.+...++|+.++|.+.|.+.+.. .++...+.....+.+++.++.+...
T Consensus 340 ~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 340 QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG---RSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC---CchHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 999999999999999999999999999874 4566667666666666655555443
No 15
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=5.1e-26 Score=199.48 Aligned_cols=276 Identities=17% Similarity=0.201 Sum_probs=171.2
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP 72 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (318)
++||+|+++||++.++...+..+|.++++.+...+.. . +|||++|++.++++++ .++....+||+|+..+
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~-~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~ 220 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLD-WGWRIPFFIALPLGII-GLYLRHALEETPAFQQ 220 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcC-ccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHH
Confidence 3689999999999999999999998888877655432 4 8999999997765554 3444556777764211
Q ss_pred CCChhHhhhhhhccCccccccccCCcchhhhhcc-hhH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch
Q psy4758 73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTS-LPV-WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA 150 (318)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~ 150 (318)
..++.++. .++..+ +.++.++++++++ ++. .......++....++....|+|.|+++.+|++..+.+....
T Consensus 221 ~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 293 (490)
T PRK10642 221 HVDKLEQG-----DREGLQ--DGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIII 293 (490)
T ss_pred HHHhhhhh-----cccccc--ccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 10000000 000000 1223456677763 232 22333344556778888899999998878998887777777
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHH-HHHHHHHh-cCchhH-HHHHHHHHHHHHhhhcccc
Q psy4758 151 APYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSA-AALVGLSF-VGDNLV-GAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 151 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (318)
...++.+++.++.|+++||+|||+.+ ..+.++.. .+...+.. ..+... .....++.+.+.. .....
T Consensus 294 ~~~~~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~g~ 362 (490)
T PRK10642 294 AIMIGMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN-CFTGV 362 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH-HHHHH
Confidence 77888999999999999999999865 33332222 12221211 122222 2222222222222 22233
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
...+..+.+|++ |+++.|+.+....+++.++|.+.+++.+.. .+|...++...+..+++.+..++.++.
T Consensus 363 ~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~---~~~~~~~~~~~~~~~i~~~~~~~~pes 432 (490)
T PRK10642 363 MASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST---QNLMMPAYYLMVVAVIGLITGVTMKET 432 (490)
T ss_pred HHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 334444667777 999999877777888899999999988763 234555555555555555555555443
No 16
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.95 E-value=4.2e-26 Score=197.51 Aligned_cols=287 Identities=16% Similarity=0.192 Sum_probs=187.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh-h
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER-I 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 80 (318)
.|++|+++|++++++.+.+.++|..+++.+.+...+...+||+.|++.++++++..++.++++||+|++.+..+.++. .
T Consensus 144 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (438)
T TIGR00712 144 VHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN 223 (438)
T ss_pred HHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc
Confidence 578999999999999999999999999888765444227999999999998888777777778887654221111100 0
Q ss_pred hhhhccCccccccccCCcc-hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
...++..++++.+.+.+.. .+.++|+|.+|...+..++.....++...|+|.|+++..|+++.+++....+..+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig 303 (438)
T TIGR00712 224 DYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG 303 (438)
T ss_pred ccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHH
Confidence 0000000000000000111 124678999999888888888888889999999999888999999999999999999999
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
.+++|+++||+++++.... .........++...+...+. +.. .....+.++.+..+.. ........+..|
T Consensus 304 ~~~~g~l~dr~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~ 375 (438)
T TIGR00712 304 TLLCGWMSDKVFKGNRGAT-------GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV-MLIGLHALELAP 375 (438)
T ss_pred HHHHHHHHHHhccCcccHH-------HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH-HHHHHHHHHhcC
Confidence 9999999999976543211 01111111122222222211 121 2222222222221111 111223445566
Q ss_pred cc-hhhHHHHHHHHHHHHH-hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 238 NF-AGTLMGFTNGCANIAS-ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 238 ~~-~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
++ |++++|+.+...++++ +++|.+.|.+.|. .+|...+++..++.+++.+..+...+++
T Consensus 376 ~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 376 KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred hhheeeehhhhchHHHhhhhhhcchhHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 54 9999999999988875 6899999999998 5788899888887777777766655443
No 17
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=2.1e-25 Score=194.97 Aligned_cols=267 Identities=16% Similarity=0.199 Sum_probs=185.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|++||+++.++...+..+|.++++.++.++.+...|||..|++.+++.++..+.. ++.||+++..+. +++.+
T Consensus 133 ~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~-~~~~~-- 208 (491)
T PRK11010 133 TDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPV-PKTLE-- 208 (491)
T ss_pred HHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccccc-ccchh--
Confidence 58999999999999999999999999999999998832799999999998877664443 346775432110 00000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch-HHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA-APYLAQWILI 160 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~ 160 (318)
+....+++++++++..|...+..++..........+.+.|+.+..|+++.+.+.... ...++.+++.
T Consensus 209 ------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ 276 (491)
T PRK11010 209 ------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA 276 (491)
T ss_pred ------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111235677888888777766666666666677788888887778999999999874 5567899999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH---HHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL---VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
+++|+++||+++|+.+ .++.++.++.. ..+....++.........+.....+...+.......+..+
T Consensus 277 ll~G~L~dr~g~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~ 346 (491)
T PRK11010 277 LYGGILMQRLSLFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN 346 (491)
T ss_pred HHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999988754 22223222222 2222222222121212222111112222333455555666
Q ss_pred cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
++ +++..|+.+...++|..+++.+.|++.|. .+|+..|.+.+++.+.+.+.....++
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~----~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEA----HGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 89999999999999999999999999998 67999999999888888777766654
No 18
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=3.9e-25 Score=188.05 Aligned_cols=258 Identities=14% Similarity=0.138 Sum_probs=184.4
Q ss_pred ccCCCCCchhH--HHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 3 KWAPPMERARL--FSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 3 ~~~~~~~r~~~--~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
|+.|+++|++. .+....+.++|.+++|.+++.+.+. .|||+.|++.++..++..++.++++||.|+++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 186 (375)
T TIGR00899 114 EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA------ 186 (375)
T ss_pred HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc------
Confidence 55666666654 6888888999999999999999987 89999999999888777677777788865432110
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
..+.+.++.+++|+++......++..........+.|.|+++++|.++.+.+...........++.
T Consensus 187 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 252 (375)
T TIGR00899 187 --------------LTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM 252 (375)
T ss_pred --------------cCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 001123446677777766666655555555667788999988789999999988777777788889
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (318)
++.|++.||+++|+.+ ..+.+...+........++.+.......+.+.+. +...+....+..+..|+++
T Consensus 253 ~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~ 321 (375)
T TIGR00899 253 LLAGYLIKRFGKRRLM----------LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI-GILAGIGMLYFQDLMPGRA 321 (375)
T ss_pred HhHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcchh
Confidence 9999999999999865 3344443444333333333222222223333332 2233445556677888888
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+++.++.+...++|..++|.+.|.+.|. .+|+..+.+.+++.+++.+.....
T Consensus 322 ~~~~~~~~~~~~~g~~~g~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 322 GAATTLYTNTGRVGWIIAGSVGGILAER----WSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccchhHHHHHHHHHHHHHHHHhee
Confidence 8999999999999999999999999988 678889988888877777665443
No 19
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=6.3e-25 Score=187.43 Aligned_cols=262 Identities=16% Similarity=0.147 Sum_probs=183.5
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++| ++|+++++++..+..+|..+++.+++.+.++..+||+.+.+.++..++.....+...++.|++++
T Consensus 123 ~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 192 (393)
T PRK09705 123 KRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH--------- 192 (393)
T ss_pred HHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---------
Confidence 46786 78999999999999999999999999988863489999887766655432222222222221100
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+++ ...++.+++|+.|...+..++....++....|+|.|+++ +|.+..+++...+...++++++++
T Consensus 193 ------------~~~-~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~ 258 (393)
T PRK09705 193 ------------KTT-TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGAL 258 (393)
T ss_pred ------------CCC-cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHH
Confidence 000 112345677888888777777788888999999999988 899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-ch
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FA 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (318)
+.|++.||+++|+.. ..+..+..++...+...+..... ....+.+.+.....+...........|+ ++
T Consensus 259 ~~g~l~~r~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 327 (393)
T PRK09705 259 LMPAMARHQDRRKLL----------MLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQPAIA 327 (393)
T ss_pred HHHHHHhhccchHHH----------HHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCHHHH
Confidence 999999999998765 44555555555444333332221 1222333333333333333334444444 49
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
++..|+.+...++++.++|.+.|++.|.. .+|...|.+.+++.++..+....+.++++
T Consensus 328 g~~~g~~~~~~~~~~~~gp~~~G~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 328 GKLVAFMQGIGFIIAGLAPWFSGVLRSIS---GNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999985 35788888888777777666655554433
No 20
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=6.5e-25 Score=188.06 Aligned_cols=265 Identities=12% Similarity=0.136 Sum_probs=184.5
Q ss_pred CccCCCCCchhHHHHHHhhHhhHH-HhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGN-LVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
.|++|+++|++++|+.+++.++|. +++|.+++++.+. .||+..++......++..++..++.+|.+++++.. ++++
T Consensus 131 ~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 207 (402)
T TIGR00897 131 VYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-FGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-TREK- 207 (402)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc-CCcc-
Confidence 367889999999999999999997 6899999998887 89776666554444443344444455543221110 0000
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
. ++....+++++|+|.++...+..++.....++...+.|.|+++ +|+++.+.+.+.....+++.++.
T Consensus 208 ----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~ 274 (402)
T TIGR00897 208 ----------F--SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN 274 (402)
T ss_pred ----------h--hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH
Confidence 0 1112345678999999988888888888888899999999977 89999999988888899999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH---Hh-cCchhH-HHHHHHHHHHHHhhhcccccccccccc
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL---SF-VGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDL 235 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (318)
+..|+++||+++|+... ..+.+...+....+ .. ..+... .....+..+.+.... .+ ......+.
T Consensus 275 ~~~g~l~dr~~~~~~~~---------~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~-~~~~~~~~ 343 (402)
T TIGR00897 275 VIFGIVGDKLGWMNTVR---------WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-VP-LAAVFPTL 343 (402)
T ss_pred HHHHHHHHhhcchhHHH---------HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HH-HHHHHHhh
Confidence 99999999999887541 11222222221111 11 112222 333334444443332 22 23345577
Q ss_pred CccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 236 SPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.|++|+++.|+.+...++++.++|.+.|.+.|. .++...+++.+++.+++.++..+++
T Consensus 344 ~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~----~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 344 APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF----FGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 788899999999999999999999999999998 6788899988888888777766543
No 21
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=4.8e-25 Score=194.00 Aligned_cols=285 Identities=13% Similarity=0.118 Sum_probs=175.5
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC----------------------CCCCchHHHHHHHHHHHHHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG----------------------SPWGWPSIFYVSGAVAIVWAA 58 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----------------------~~~gWr~~f~~~~~~~~~~~~ 58 (318)
++|++|+++|++++++.+....+|.++++.++..+.. ..++||+.|.+.++++++. .
T Consensus 140 ~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~ 218 (502)
T TIGR00887 140 TSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-L 218 (502)
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-H
Confidence 3689999999999999999999999999988876532 1148999998887777654 4
Q ss_pred HHHHHhcCCCCC---CCCCChhHhhhhhh----ccCc--cc-c----ccccCCcchhhhhcc---hh----HHHHHHHHH
Q psy4758 59 AWCYIGANSPAQ---HPFISLEERIYIET----SLVH--SS-T----VSSSMKVPWKAILTS---LP----VWAVLITHL 117 (318)
Q Consensus 59 ~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~--~~-~----~~~~~~~~~~~~~~~---~~----~~~~~~~~~ 117 (318)
+..+++||+|+- +++.+++..+...+ +..+ ++ + +.+..+.++++++++ ++ .+......+
T Consensus 219 ~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (502)
T TIGR00887 219 YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWF 298 (502)
T ss_pred HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 556788999873 22211111111110 0000 00 0 001112357777753 22 222233344
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcceeechhh------------hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 118 CQNWGYWTLLTEMPSYINSVLQFDIKSNGF------------LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 118 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
.....+++...|.|.++++ .|++..+.+. ......++.+++.+++++++||+|||+.+
T Consensus 299 ~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l--------- 368 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ--------- 368 (502)
T ss_pred HHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH---------
Confidence 4555667778889999976 7887653321 12333456677888999999999999865
Q ss_pred HHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhh
Q psy4758 186 NTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
..+..+..++..++.... +....................+....+..|.+|++ |+++.|+.+..++++++++|.+
T Consensus 369 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 447 (502)
T TIGR00887 369 -LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFG 447 (502)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344444444433333221 11111111111122222233445556678999988 9999999999999999999999
Q ss_pred hheeeccCCC------ccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 262 VGFIVTDNTS------VSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 262 ~g~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+.+.|..+. ..++...|++.+++.+++.+..++++
T Consensus 448 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lp 489 (502)
T TIGR00887 448 FLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIP 489 (502)
T ss_pred hhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEec
Confidence 9999885321 13455677777777777766554444
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=4e-25 Score=190.43 Aligned_cols=263 Identities=13% Similarity=0.056 Sum_probs=183.5
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
+.|++|+++|+++.++.....++|..+||.+++.+.+. .+||+.|++.++..++.. +..+.+|+++++++..+ ++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~-~~~- 210 (417)
T PRK10489 135 TPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-GGVAWNYGLAAAGTFITL-LPLLRLPALPPPPQPRE-HPL- 210 (417)
T ss_pred hhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH-HHHHhCCCCCCCCcccc-cch-
Confidence 35889999999999999999999999999999999887 899999998877666553 34455666543221100 000
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
++....++.++++|.++...+..++.. .......++|.|+++.+|.++.+.+++.+...++.+++.
T Consensus 211 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 211 -------------RSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred -------------HHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence 111223556778887766655544433 245677889999998889999999999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF- 239 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (318)
++.+++.||.++++.+ ..+.++..++++.+...++........++.+.+. +...+.......+..|++
T Consensus 277 ~~~~~l~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~ 345 (417)
T PRK10489 277 LTSGWLAHSARPGLLM----------LLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS-AISSLLQYTLLQTQTPDEM 345 (417)
T ss_pred HHHHHhhhccCcchHH----------HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCHHH
Confidence 9999999986665544 4455555555555554443322223333333332 223344455666777766
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
||+++|+.+...++|..+||.+.|.+.|. .++...+...+++.++..++....
T Consensus 346 ~g~~~g~~~~~~~~g~~~g~~l~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 346 LGRINGLWTAQNVTGDAIGAALLGGLGAM----MTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHhhhHhHHHHHHHHHHHH----hchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998 566777776666555544444333
No 23
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=6.7e-25 Score=189.75 Aligned_cols=268 Identities=15% Similarity=0.137 Sum_probs=173.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF 73 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (318)
+|++|+++|++..+..+.+..+|.+++..+...+.. . +|||++|++.+++.++. .......||+|+..+
T Consensus 151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~-~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~- 227 (438)
T PRK09952 151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLS-WGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQ- 227 (438)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhc-cChHHHHHHHHHHHHHH-HHHHHhCCCChhHHH-
Confidence 589999999999999999999999999887776652 3 79999999887765442 333334455442110
Q ss_pred CChhHhhhhhhccCccccccccCCcc-hhhhhcchhHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758 74 ISLEERIYIETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLI-THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA 151 (318)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 151 (318)
..++. + + .+++.+ .+.++++|+.+...+ ..++.....+....|.|.|+++.+|++..........
T Consensus 228 --~~~~~------~-~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~ 294 (438)
T PRK09952 228 --QQHEQ------A-A----AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLL 294 (438)
T ss_pred --HHhhc------c-c----ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 00000 0 0 011112 234667777666543 4555566778888999999988788887765555556
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHhhhccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGDNLVGAITCLTLAIAINAGTYTGF 228 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
.++..+++.++.|+++||++||+.+ ..+.++..++...+.. ..+..........+.....+...+..
T Consensus 295 ~g~~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 364 (438)
T PRK09952 295 VGGLSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQ 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888899999999999999865 3333333332222211 12222222222222222223334445
Q ss_pred cccccccCccc-hhhHHHHHHHHHH-HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 229 LSNHLDLSPNF-AGTLMGFTNGCAN-IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 229 ~~~~~~~~~~~-~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
..+..|.+|.+ |+++.|+.+...+ +++.++|.+.+++.|.++ .+|...+...+++.+++.+..+..+
T Consensus 365 ~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~--~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 365 QPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG--GSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHcc
Confidence 56677888877 9999999766654 899999999999988642 3577778777777777777766553
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.94 E-value=5.1e-25 Score=187.35 Aligned_cols=256 Identities=17% Similarity=0.158 Sum_probs=185.2
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.||+| ++|++++++...+.++|..+++++.+.+.+. .|||+.|++.++++++..+..+++++|+|+++++.++ +.
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 191 (377)
T TIGR00890 117 VKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-EGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI-EV-- 191 (377)
T ss_pred HHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc-cc--
Confidence 35676 6899999999999999998877777777776 8999999999998888777777776664432111000 00
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++++.+.++.+|+|.++...+..++..........+.+.|.++ +|.+..+.+...+...++.+++++
T Consensus 192 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 258 (377)
T TIGR00890 192 ------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRP 258 (377)
T ss_pred ------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1112345678889988888777776666666666777777766 788888888889999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HH-HHHHHHHHHHhhhccccccccccccCccc
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GA-ITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
+.|++.||++||+.+ ..+..+..++.......++... .. ......+.+. +...+.......|..|++
T Consensus 259 ~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~ 327 (377)
T TIGR00890 259 FLGALSDKIGRQKTM----------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW-GGTISLFPSLVSDIFGPA 327 (377)
T ss_pred HHHHHHHHHhhhhhh----------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhh
Confidence 999999999999876 5555666666655555443222 12 2222233222 223344445555666665
Q ss_pred -hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHH
Q psy4758 240 -AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGN 290 (318)
Q Consensus 240 -~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (318)
|+++.|+.+...++|+.++|.+.|.+.|. .+|+..|.+.+++.+++.
T Consensus 328 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 328 NSAANYGFLYTAKAVAGIFGGLIASHALTE----IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999988 678889888877766654
No 25
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=9.5e-25 Score=188.71 Aligned_cols=261 Identities=15% Similarity=0.078 Sum_probs=170.3
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP 72 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (318)
++|++|+++|+++.++.+.+...|.++++.+...+.. . +|||++|++.++++++. ......+||+|+.
T Consensus 149 i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~-- 224 (432)
T PRK10406 149 MSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELRE-WGWRIPFALGAVLAVVA-LWLRRQLDETSQQ-- 224 (432)
T ss_pred HHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cchHHHHHHHHHHHHHH-HHHHhcCCCCchH--
Confidence 3689999999999999999999998888877665542 4 79999999988777654 3333344554321
Q ss_pred CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758 73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC-QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA 151 (318)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 151 (318)
+++. .++..++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.....
T Consensus 225 -----~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i 287 (432)
T PRK10406 225 -----ETRA------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTA 287 (432)
T ss_pred -----HHhh------------hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 1000 1112357888999888876665544 366778889999999988789998888888888
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HH--HhcCchhHHHHHHHHHHHHHhhhccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GL--SFVGDNLVGAITCLTLAIAINAGTYTGF 228 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
..+...++.++.|+++||++||+.+ ....++..+... .. ....+..........++.+......+..
T Consensus 288 ~~~~~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (432)
T PRK10406 288 ALFVFMLIQPLIGALSDKIGRRTSM----------LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSIS 357 (432)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999854 222222222111 11 1111122222222222222222223345
Q ss_pred cccccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 229 LSNHLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 229 ~~~~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
..+..|.+|++ |++++|+.+...++ ++...|.+.+.+ +.+ ..|...++..+++.+++.+..+.+
T Consensus 358 ~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~---g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 358 GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSI---GMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHh---CCCcHHHHHHHHHHHHHHHHHHHh
Confidence 56677888887 99999999988775 345577877754 543 335556666666666666555544
No 26
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=1.7e-24 Score=185.02 Aligned_cols=263 Identities=16% Similarity=0.171 Sum_probs=184.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|+++++..+....+|..++|.+.+.+.....|||+.|.+.+++.++..++.++ ++.|+.+++.+ ++
T Consensus 121 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~--~~-- 194 (394)
T PRK03699 121 THVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP--KA-- 194 (394)
T ss_pred hhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc--cc--
Confidence 5788999999999999999999999999998887653379999999988877765443332 23332111100 00
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++ +. .++ ..++.++...+..++.....+.+..|+|.|+++.+|+|+.+.+.+.+...++..++.+
T Consensus 195 --------~~--~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 259 (394)
T PRK03699 195 --------DK--PV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMW 259 (394)
T ss_pred --------cC--cc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHH
Confidence 00 00 011 1246677777777777777888899999999888899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
+.|+++||+++|+.+ .....+..+.+.++...++........+..+.+.. ...+.......+..|++++
T Consensus 260 ~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~ 328 (394)
T PRK03699 260 IFSFIVRFFDLQRIL----------TVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSS-AIYTTIITLGSQQTKVASP 328 (394)
T ss_pred HHHHHHHHhchhhHH----------HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHccCCCH
Confidence 999999999999865 33444444444444444443333333334443333 2334444445555666677
Q ss_pred hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
+..+......++|+.++|.+.|++.|. .+++..++..+++.+++.+......+.+
T Consensus 329 ~~~g~~~~~~~~g~~i~p~~~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T PRK03699 329 KLVNFILTCGTIGTMLTFVVTSPIVAH----FGLQAALLTANGLYAVVFVMCILLGFVS 383 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHH----hCchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999998 6788888888888777766665555433
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.93 E-value=1.3e-24 Score=185.04 Aligned_cols=260 Identities=17% Similarity=0.160 Sum_probs=179.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++...+..+|..+++++++.+.+. .|||+.|++.+++.++..+..++.+||.+++++. +.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---~~--- 189 (382)
T PRK10091 117 SKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-FSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---GL--- 189 (382)
T ss_pred HHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---CH---
Confidence 5788999999999999999999999999999999887 8999999999988877666666667775432110 00
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+. ..+.+|++..+......++.....+....+.+.++++.+|+++.+.+.+.....++.+++.+
T Consensus 190 ---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~ 253 (382)
T PRK10091 190 ---------------RE-QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNL 253 (382)
T ss_pred ---------------HH-HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhH
Confidence 01 12356777777766655555555666667788888877899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN-LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF- 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (318)
+.|++.||+++|+.+ ..+..+.+++.+.+....+. +......+..+.+......+.......+..+++
T Consensus 254 ~~g~l~~r~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (382)
T PRK10091 254 LSGRLSGRYSPLRIA----------AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL 323 (382)
T ss_pred HHheeccccCchhHH----------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH
Confidence 999999999998865 44555555555444332222 222222233333333323322323333433333
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
++.+ ..+...++|.++||.+.|.+.|.+ .+|+..+...+++.++.........++
T Consensus 324 ~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 324 LGAA--GGQIAFNLGSAIGAYCGGMMLTLG---LAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred HHHH--HHHHHHHHHHHHHHHHhHHHHHcc---cCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 5444 346778999999999999999974 578888888776666655554444433
No 28
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=2.8e-24 Score=183.64 Aligned_cols=256 Identities=12% Similarity=0.104 Sum_probs=172.8
Q ss_pred ccCCCCCc--hhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 3 KWAPPMER--ARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 3 ~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
|+.++++| +...++.+++.++|.+++|++++.+.++ .|||..|++.++.+++.+++.++.+||.+++++..+ ++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 208 (393)
T PRK15011 132 EHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT-GTL- 208 (393)
T ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc-ccc-
Confidence 44555544 3456888999999999999999999987 899999999998888877777777888654322110 000
Q ss_pred hhhhccCccccccccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
+. . .++ +..+......+........+..+.|.|+++.+|+++.+.+.+.+...++.+++
T Consensus 209 -------------~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~ 268 (393)
T PRK15011 209 -------------EA----P---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPT 268 (393)
T ss_pred -------------cc----c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 00 0 112 22233333334444455566678999998888999999998887777888889
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
.++.|+++||+++|+.+ ..+.....+........++.. .......+.....+...+....+..|..|++
T Consensus 269 ~~~~G~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~ 337 (393)
T PRK15011 269 MLIAGYFAKRLGKRFLM----------RVAAVAGVCFYAGMLMAHSPA-ILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ 337 (393)
T ss_pred HHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999854 233333333332333233322 2222222121111222222334556778888
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
++++.++.+...++|..++|.+.|.+.|. .+|+..+.+.+++.+++.+..+..
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~l~G~i~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 338 AGSATTLYTNTSRVGWIIAGSLAGIVAEI----WNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998 678989888887777777666554
No 29
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=2.7e-25 Score=192.96 Aligned_cols=275 Identities=15% Similarity=0.159 Sum_probs=180.9
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CCChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-FISLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (318)
.|+++ ++|++++|+.+.+..+|..++|.+++.+.+. .|||++|++.+++.++..+..++..++.+.++. +.++++..
T Consensus 134 ~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 211 (455)
T TIGR00892 134 GKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES-FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGL 211 (455)
T ss_pred HHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccC
Confidence 46775 7899999999999999999999999999887 899999999998887665544444333221100 00000000
Q ss_pred hhhhccCccccc--c-ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHH
Q psy4758 81 YIETSLVHSSTV--S-SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQW 157 (318)
Q Consensus 81 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~ 157 (318)
......++.+.. . +..+....+++++|.++...+..++...+.+....++|.|+++ .|+++.+++.+.+..+++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~ 290 (455)
T TIGR00892 212 PPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDI 290 (455)
T ss_pred CCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHH
Confidence 000000000000 0 0011111257889999988888888888888888899999987 79999999999999999999
Q ss_pred HHHHHHHHhHHHHh--hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccccc
Q psy4758 158 ILILVFSWLADYIV--AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL 235 (318)
Q Consensus 158 ~~~~~~g~l~dr~g--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (318)
+++++.|++.||.. +++.. ....+.+..++..++....++.+.+.+..++.+.+... ..+.......+.
T Consensus 291 ~~~~~~g~l~d~~~~~~~~~~--------~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~-~~~~~~~~~~~~ 361 (455)
T TIGR00892 291 FARPSCGLIAGLKWIRPHVQY--------LFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS-VGALLFEVLMDL 361 (455)
T ss_pred HHHHHHHHHhcccccCHHHHH--------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch-HHHHHHHHHHHH
Confidence 99999999999732 22211 11223333333333444444433234444444444333 333444444455
Q ss_pred Ccc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758 236 SPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNL 291 (318)
Q Consensus 236 ~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (318)
.|+ +++++.|+.+...++|++++|.+.|.+.|.. .+|+..|++.+++.+++.+
T Consensus 362 ~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~---g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 362 VGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT---KNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc---CCcchHHHHhhHHHHHHHH
Confidence 454 5999999999999999999999999999974 3588888887776666554
No 30
>KOG2533|consensus
Probab=99.93 E-value=4.8e-25 Score=188.74 Aligned_cols=267 Identities=14% Similarity=0.153 Sum_probs=185.4
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-----SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFIS 75 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-----~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (318)
++.||.++||++.+|++.+..++|.++|++++..+.+ ...||||.|++.|+++++.+++.++++|+.|.+..-.+
T Consensus 159 lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~ 238 (495)
T KOG2533|consen 159 LGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT 238 (495)
T ss_pred HHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccc
Confidence 3579999999999999999999999999999998642 12799999999999999999999999999998776666
Q ss_pred hhHhhhhhhccCcccccc---ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHH
Q psy4758 76 LEERIYIETSLVHSSTVS---SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAP 152 (318)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~ 152 (318)
++|+....++.+++++.. +.+...+++.+++|.+|...+..++.....+++.+|+|.|+++..|+|..++..+..+.
T Consensus 239 ~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~ 318 (495)
T KOG2533|consen 239 DEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPY 318 (495)
T ss_pred hHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchH
Confidence 666554444333332221 24556778889999999999999999999999999999999996679999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHh----hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccc
Q psy4758 153 YLAQWILILVFSWLADYIV----AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGF 228 (318)
Q Consensus 153 ~~~~~~~~~~~g~l~dr~g----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
.++++++.+++|.++||.. +|... .....+...++...+.............+....+.........
T Consensus 319 ~~~g~v~~i~ag~lsdr~~~~~~~~~~~---------~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 319 DVGGIVGLILAGYLSDRLKTIFARRLLF---------IVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL 389 (495)
T ss_pred HhhhHHHHHHHHHHHHHHhhhHHHHHHH---------HHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence 9999999999999999953 33322 2334444444544444443233222222222222222222222
Q ss_pred cccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe-eeccCCCccchHHHHH
Q psy4758 229 LSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF-IVTDNTSVSQWQTIFL 280 (318)
Q Consensus 229 ~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~-l~~~~~~~~~~~~~~~ 280 (318)
........++. +-+..+......+.++.++|.+.-. .... ..|...|.
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~----y~~~~~f~ 439 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR----YGWGAVFY 439 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc----hhhhhHHH
Confidence 22223334443 5555555566666666655555332 2222 45666663
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.93 E-value=1.5e-23 Score=180.14 Aligned_cols=240 Identities=13% Similarity=0.062 Sum_probs=172.9
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++.+++......+|..++|.+++.+.+. .+||+.|++.++..++..+..++..||+++++++..+ .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 201 (406)
T PRK15402 127 QESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-LPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLS-L--- 201 (406)
T ss_pred HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccccc-H---
Confidence 4788999999999999998899999999999999887 8999999998888887766666666765432211000 0
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++...++++++++|.++...+..++..........+.|.++++.+|+++.+.+.......++.+++.+
T Consensus 202 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~ 269 (406)
T PRK15402 202 ------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNL 269 (406)
T ss_pred ------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11123456788999998888777777666667777889998887899999988887777888999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---Cc-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---GD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+.|++.||+++|+.+ ..+.++..++...+... .+ ... ......+.+.+.... .+..........
T Consensus 270 ~~g~l~~r~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~~~ 338 (406)
T PRK15402 270 TLARLTSRRPLRSLI----------RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLFSS 338 (406)
T ss_pred HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH-hhhHHHHHhhhc
Confidence 999999999998865 44544444444444322 11 221 223333344443332 223223333445
Q ss_pred ccchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 237 PNFAGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 237 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
++++|+..+..+..+.++..+|+.+.+.+.+..
T Consensus 339 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 339 DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 567999999999999999999999999998883
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=9.1e-25 Score=191.74 Aligned_cols=282 Identities=16% Similarity=0.132 Sum_probs=171.0
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF 73 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (318)
++|++|+++|++++++.+.+..+|.++++.++..+.. ...|||+.|++.+++.++.. +..+++||+|+....
T Consensus 145 i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~ 223 (479)
T PRK10077 145 IAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMS 223 (479)
T ss_pred HHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHH
Confidence 4699999999999999999999999999888776542 12799999999888777764 446678988753111
Q ss_pred -CChhHhhhhhhccCccccccccCCcchhhhhc-----chhHH------H---HHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy4758 74 -ISLEERIYIETSLVHSSTVSSSMKVPWKAILT-----SLPVW------A---VLITHLCQNWGYWTLLTEMPSYINSVL 138 (318)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~---~~~~~~~~~~~~~~~~~~~p~~l~~~~ 138 (318)
.++++.+...++....++. +....+.++.++ .+..+ . .....+....+++....+.|.++++ .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~ 301 (479)
T PRK10077 224 RGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-L 301 (479)
T ss_pred cCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-c
Confidence 1111111111111000000 000000111111 01100 0 0111112222334445667877766 7
Q ss_pred cceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--Cc-hhH-HHHHHH
Q psy4758 139 QFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GD-NLV-GAITCL 214 (318)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~ 214 (318)
|++...........++..+++.+++++++||+|+|+.+ ..+.++.+++.+.+... .+ ... .....+
T Consensus 302 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 371 (479)
T PRK10077 302 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQAPGIVALLSML 371 (479)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 88877777777778888999999999999999999866 45555555555444322 11 111 222223
Q ss_pred HHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee------ccCCCccchHHHHHHHHHHHH
Q psy4758 215 TLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV------TDNTSVSQWQTIFLIAAAIFF 287 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~~~~~~~~~~~~~~ 287 (318)
..+.++.....+.......|.+|++ |+++.|+.+...++++.+++.+.+.+. |. .++...|++.++..+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 372 FYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH----FHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh----ccCccHHHHHHHHHH
Confidence 3333333333355667777888766 999999999999999998877665443 33 566777877777767
Q ss_pred HHHHHHHhhccc
Q psy4758 288 FGNLIFLIFGTS 299 (318)
Q Consensus 288 ~~~~~~~~~~~~ 299 (318)
++.++.+...++
T Consensus 448 ~~~~~~~~~~~e 459 (479)
T PRK10077 448 LAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHhcccc
Confidence 666665554443
No 33
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=6.9e-24 Score=186.16 Aligned_cols=253 Identities=12% Similarity=0.062 Sum_probs=182.9
Q ss_pred ccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHhh
Q psy4758 3 KWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEERI 80 (318)
Q Consensus 3 ~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (318)
+++ |+++|++++|+......+|..+||.+++++.+. .||||.|++...++++..++..+++||+++++++ .+..+..
T Consensus 121 ~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~-~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~ 199 (495)
T PRK14995 121 ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH-FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHAL 199 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHH
Confidence 444 678999999999999999999999999999998 9999999999888888777777788886543221 1111100
Q ss_pred -----------hhhhccCcc-----------------------ccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy4758 81 -----------YIETSLVHS-----------------------STVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTL 126 (318)
Q Consensus 81 -----------~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (318)
...+..... +.+ .+++.-..+++|+|.+....+..++.....++.
T Consensus 200 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~ 278 (495)
T PRK14995 200 MLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF 278 (495)
T ss_pred HHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence 000000000 000 111222246889999988888888888888888
Q ss_pred HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy4758 127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-- 204 (318)
Q Consensus 127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-- 204 (318)
..+.|.|+++.+|+++.++|....+..++..++.++.|++.||+|+|+.+ ..+.++..++...+....
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~g~~~~~~~~~~l~~~~~~ 348 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA----------TGGMALSALSFYGLAMTDFS 348 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999988755 455555555554443322
Q ss_pred -chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 205 -DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
+........++.+.+.+....+.......+.++++++.+.++.+..+++|+.+|+.+.|.+.+
T Consensus 349 ~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 349 TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233344455555544444445555555556669999999999999999999999888764
No 34
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=1.9e-24 Score=186.93 Aligned_cols=253 Identities=16% Similarity=0.166 Sum_probs=161.6
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++...+.++|.++++.+.+.+.+. .+||+.|++..+..++ ........||+++.. +++.
T Consensus 132 ~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~-~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~-----~~~~- 203 (426)
T PRK12307 132 VESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-YGWRAAFFVGLLPVLL-VIYIRARAPESKEWE-----EAKL- 203 (426)
T ss_pred HHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-CCHHHHHHHHHHHHHH-HHHHHHHCCCChHHH-----Hhhh-
Confidence 5889999999999999999999999999999998887 8999999885433322 122222223322110 0000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHH---HHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITH---LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
.+..++++...+....++++++++|.++...... +......+.+..++|.|+++ .|+++.+.+...+...++.++
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 281 (426)
T PRK12307 204 -SGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVL 281 (426)
T ss_pred -hccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 0000000000011123567888888776543322 22233334567889999988 699999999888888999999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHh-hhccccccccccccCc
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAIN-AGTYTGFLSNHLDLSP 237 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (318)
+.++.|++.||+++|+.+ ..+.++..+....+...++..........++.+.. ....+.......|..|
T Consensus 282 g~~~~g~l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 351 (426)
T PRK12307 282 GNIVWGLCADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFP 351 (426)
T ss_pred HHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCc
Confidence 999999999999998865 44444444444333333322222222222222221 1122333344567777
Q ss_pred cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758 238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI 278 (318)
Q Consensus 238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 278 (318)
++ ||+++|+.+...++++.++|.+.|++.|. .++...
T Consensus 352 ~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~----~g~~~~ 389 (426)
T PRK12307 352 LEVRGLGTGLIYNLAATSGTFNSMAATWLGIT----MGLGAA 389 (426)
T ss_pred HHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc----ccHHHH
Confidence 76 99999999999999999999999999988 455443
No 35
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=3.8e-24 Score=187.69 Aligned_cols=281 Identities=16% Similarity=0.112 Sum_probs=181.7
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHH---HHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVA---GLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH--PFIS 75 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~---~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 75 (318)
++|++|+++|++++++.+.+..+|.++++.++ ....+. .+||+.|++.++..++. ++..+++||+|+.. +...
T Consensus 152 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 229 (481)
T TIGR00879 152 LSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT-LGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRV 229 (481)
T ss_pred HHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCCh
Confidence 36899999999999999999999999999999 555566 89999999966555544 45566678876421 0001
Q ss_pred hhHhhhhhhccCcccc-----------------ccccCCcchhhhhc------chhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy4758 76 LEERIYIETSLVHSST-----------------VSSSMKVPWKAILT------SLPVWAVLITHLCQNWGYWTLLTEMPS 132 (318)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~ 132 (318)
++..+...+....++. +.+..+..++++++ .+.++...+..+...........+.|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (481)
T TIGR00879 230 EEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPT 309 (481)
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHH
Confidence 1101100000000000 00000111233333 223333333344334444455667777
Q ss_pred hhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH---hcC-c---
Q psy4758 133 YINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS---FVG-D--- 205 (318)
Q Consensus 133 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~-~--- 205 (318)
++++ .|++..+.+.......++.+++.++.|+++||+++|+.+ ..++++..++.+.+. ... +
T Consensus 310 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (481)
T TIGR00879 310 IFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFVTGSS 378 (481)
T ss_pred HHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 7766 799998888888888999999999999999999999865 444555555544443 111 1
Q ss_pred ---hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758 206 ---NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI 281 (318)
Q Consensus 206 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (318)
.............++.....+.......|..|++ |+++.|+.+...+++++++|.+.+.+.+. .+|...|++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~----~~~~~~f~~ 454 (481)
T TIGR00879 379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES----IGVGGVFIF 454 (481)
T ss_pred cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccceehh
Confidence 1112233333333444444455666667877776 99999999999999999999999999888 578888888
Q ss_pred HHHHHHHHHHHHHhhcc
Q psy4758 282 AAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 282 ~~~~~~~~~~~~~~~~~ 298 (318)
.+++++++.++.....+
T Consensus 455 ~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 455 FGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHheecc
Confidence 88887777766655443
No 36
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.9e-23 Score=178.26 Aligned_cols=251 Identities=13% Similarity=0.167 Sum_probs=174.0
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+|+|++++++...+.++|.+++|++++.+.+. +|||+.|++.++++++..+......||+|++++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~--------- 203 (394)
T PRK10213 134 MRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS--------- 203 (394)
T ss_pred HHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc---------
Confidence 5899999999999999999999999999999999998 899999999887776654444444555432110
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+...+.++.+|+|.++...+..++.....+....+.+.++.+++|+++.+.+......+++.+++.+
T Consensus 204 -------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~ 270 (394)
T PRK10213 204 -------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTS 270 (394)
T ss_pred -------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence 0111245678899988877776666666767777764444445899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
+.+++.||.+++... ....+.....+.+....++.+......++.+.+. ....+.......+..|++++
T Consensus 271 ~~~~l~~r~~~~~l~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~ 339 (394)
T PRK10213 271 LSSFILKRSVKLALA----------GAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF-ALVPVGWSTWITRSLADQAE 339 (394)
T ss_pred HHHHHHhccchhHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHCcccHH
Confidence 999999995433221 2222222232333333333332333334444333 33445455445555677777
Q ss_pred hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHH
Q psy4758 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGN 290 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (318)
++.++.....++|..+||.++|++.|. .++...+...+++.++..
T Consensus 340 ~~~~~~~~~~~lg~~~G~~l~G~l~~~----~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 340 KAGSIQVAVIQLANTCGAAIGGYALDN----IGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc----cChhhHHHHHHHHHHHHH
Confidence 888888888899999999999999998 567777777665554443
No 37
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=1.3e-23 Score=183.89 Aligned_cols=254 Identities=15% Similarity=0.118 Sum_probs=175.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.....++|..++|.+++.+.+. .|||+.|++..+...+..++.....|+.+.+..+.+......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (471)
T PRK10504 124 MKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLL 202 (471)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHH
Confidence 5788999999999999999999999999999999998 899999999888777766666666665543332222111000
Q ss_pred -----------hhhccCc-----------------------cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH
Q psy4758 82 -----------IETSLVH-----------------------SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL 127 (318)
Q Consensus 82 -----------~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (318)
....... ++++.+++..+. +++|||+++......++.........
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~ 281 (471)
T PRK10504 203 LAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLP 281 (471)
T ss_pred HHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHH
Confidence 0000000 001001122233 57899999988888888888877777
Q ss_pred hhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-ch
Q psy4758 128 TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DN 206 (318)
Q Consensus 128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~ 206 (318)
.+.|.|+++..|.++.+.++......++.+++.++.+++.||+++|+.+ ..+..+..+...++.... ..
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 351 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----------VATTLGLALVSLLFMLVALLG 351 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHhccccc
Confidence 8899999877899999999998888888899999999999999999865 445554554444444332 22
Q ss_pred hH--HHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 207 LV--GAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 207 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+. .....+..+.+..... +.......+..| ++++.++|+.++..++|..+|+.+.|.+.+.
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRF-SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1222233333333222 233333334444 4599999999999999999999999998776
No 38
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.92 E-value=1.6e-24 Score=184.42 Aligned_cols=263 Identities=18% Similarity=0.190 Sum_probs=177.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTL-PVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
+|++|+++|++++++.+.+..+|..+++ .++..+.+. .+||+.|++.+++.++..++.+++.||+|++++..++++..
T Consensus 109 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T TIGR00881 109 TKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP 187 (379)
T ss_pred HHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc
Confidence 5889999999999999999999999999 577777776 89999999999888877777777777766543211111110
Q ss_pred hhh--hccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 81 YIE--TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 81 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
..+ +..++++++.+..+...++++++|.++...+..++..........+.|.|+++..|+++.+.+.......++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 267 (379)
T TIGR00881 188 NEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLV 267 (379)
T ss_pred ccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcch
Confidence 000 000000000012223456778899999998888888888889999999999988899999999999999999999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+.++.|++.||..+++.... .........++.......+. ... .....+..+..... ..........+..
T Consensus 268 ~~~~~g~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 339 (379)
T TIGR00881 268 GTLLAGWLSDKLFNGRRGPL-------AVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG-PQMLIGVIASELA 339 (379)
T ss_pred hHHHHHHHHHHHcCCcchHH-------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh-hhHHHHHHHHHhc
Confidence 99999999999755442211 11112222222222222212 111 22222333322222 2223334455666
Q ss_pred ccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHH
Q psy4758 237 PNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQT 277 (318)
Q Consensus 237 ~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 277 (318)
|++ |+++.|+.+...++|+.++|.+.|.+.|. .+|+.
T Consensus 340 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~ 377 (379)
T TIGR00881 340 PKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG----FGWAG 377 (379)
T ss_pred CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh----hcccc
Confidence 655 99999999999999999999999999998 55654
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=5e-23 Score=175.76 Aligned_cols=237 Identities=17% Similarity=0.162 Sum_probs=170.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+....+|..+++.+++.+.+. .+||+.|++.++..++..+..++..||+++++++.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 192 (385)
T TIGR00710 119 RDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQI----- 192 (385)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCH-----
Confidence 5889999999999999999999999999999999887 8999999999888877766666667765543221111
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+....++++++|+|+++...+...+.....+....+.|.++++.+|.++.+.+.+.....++.+++.+
T Consensus 193 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 260 (385)
T TIGR00710 193 ------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGF 260 (385)
T ss_pred ------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11113456788899998888777777777888888999999887999999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---C-chhHH-HHHHHHHHHHHhhhccccccccccccC
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---G-DNLVG-AITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+.|++.||+++|+.+ ..+..+..++..++... . +.... .......+.+... ..+.......|..
T Consensus 261 ~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 329 (385)
T TIGR00710 261 LNGRFIKKWGAKSLL----------RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM-ISSIAMAYALEDF 329 (385)
T ss_pred HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence 999999999998865 33444444333333221 1 11112 2222223333332 3344444555666
Q ss_pred ccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 237 PNFAGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 237 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
|++++++.++.+.....++.+.+.+.+.+.+
T Consensus 330 ~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 330 PHVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7779999999999988777666666664443
No 40
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=3.7e-23 Score=177.32 Aligned_cols=265 Identities=13% Similarity=0.083 Sum_probs=173.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+|||+++.++...+.++|.++++.++..+.+...|||..|++.+++.++..+ ..+..||+++++++. ++.+
T Consensus 120 ~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~-~~~~-- 195 (402)
T PRK11902 120 TDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL-TTLWAPEPEVPARPP-RSLG-- 195 (402)
T ss_pred HHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH-HHHhcCCCccccccc-chhH--
Confidence 588999999999999999999999999999999988525999999998887766533 345566654322111 0000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH-HHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY-LAQWILI 160 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~ 160 (318)
++...++++++|||.++...+..++..........+.+.++.+.+|+++.+.+++....+ ++.+++.
T Consensus 196 ------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~ 263 (402)
T PRK11902 196 ------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA 263 (402)
T ss_pred ------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH
Confidence 111235678899999888777666665554444455566677768999999998876654 4688999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH---HHHHHhcCchhHHHHHHH-H---HHHHHhhhcccccccccc
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA---LVGLSFVGDNLVGAITCL-T---LAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~ 233 (318)
+++|++.||+++|+.+ ..+..+..+. +......+++.+...... . .................+
T Consensus 264 ~~~g~l~~r~g~~~~l----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 333 (402)
T PRK11902 264 LAGGTLMVRLGLYRSL----------MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCN 333 (402)
T ss_pred HHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999988854 2333332322 222233333322222221 1 111112222333344444
Q ss_pred ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+..| ++..++.+...+++...++.+.|.+.|. .+|+..|.+.+++.+++.++....+++
T Consensus 334 ~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~----~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 334 RSFS---ATQYALLSALASVGRVYVGPTSGYLVEA----YGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred CCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444 4455666666777887777789999999 789999988888887776665444433
No 41
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=2.8e-23 Score=178.70 Aligned_cols=263 Identities=18% Similarity=0.204 Sum_probs=178.2
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++.+++.++..+...+++||++++.++.++.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 207 (408)
T PRK09874 132 ATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS-YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLH--- 207 (408)
T ss_pred HHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhH---
Confidence 4678999999999999999999999999999999887 899999999998887776767777777543211100000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcceee---chhhhchHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAV-LITHLCQNWGYWTLLTEMPSYINSVLQFDIK---SNGFLSAAPYLAQW 157 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~---~~~~~~~~~~~~~~ 157 (318)
..+..+.+++|+++.. ....+...........++|.|..+..+.... ..+.+....+++.+
T Consensus 208 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 272 (408)
T PRK09874 208 ---------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAAL 272 (408)
T ss_pred ---------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 0112344566665543 2333334444455667788888774332211 23445556677888
Q ss_pred HHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 158 ILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 158 ~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
++.+..|++.||+++|+.+ ..+..+..+..+.....++.+...+..++.+.+... ..+.......+..|
T Consensus 273 ~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 341 (408)
T PRK09874 273 LSAPRLGKLGDRIGPEKIL----------ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGA-LLPAVQTLLVYNSS 341 (408)
T ss_pred HHHHHHHHHHhccccchhH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHh-hHHHHHHHHHHhCC
Confidence 8899999999999999876 445555555555554444433233333344443333 33333333344444
Q ss_pred -cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 238 -NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 238 -~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+++|+.+++.+...++|..+||.+.|.+.+. .+|+..|++.+++.+++.+......+
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~----~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 342 NQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN----YGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred cccceeeehHHHHHHHHHHHhhHHHHHHHHhh----cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999999999999999888 68999999998888887776655433
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=6.3e-24 Score=179.88 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=175.4
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCCChhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYI-GANSPAQHPFISLEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (318)
+.|++|+++|++++++.+.+..+|.+++|.+++.+.+. .|||+.|++.++..++..++.+.. .||+++++++ +.+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 194 (365)
T TIGR00900 117 LPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-LGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ-ALSNA 194 (365)
T ss_pred HHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc-ccchh
Confidence 36899999999999999999999999999999999987 899999999877666554433332 2222211111 00000
Q ss_pred hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
.. ++....+++++|+|.++...+..+.......... .+.|.+.++.+|.++.+.+.......++.++
T Consensus 195 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (365)
T TIGR00900 195 VL------------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALL 262 (365)
T ss_pred HH------------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 00 1122346678889999888887777777776666 8889999887899999999999999999999
Q ss_pred HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLVGAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
+.++.+++.||.++++.+ ..+..+.++........++ .....+..+..+.+... ..+.......+..|
T Consensus 263 ~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 331 (365)
T TIGR00900 263 GALLLGLLGRYFKRMALM----------TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP-INVPQGTLLQRRVP 331 (365)
T ss_pred HHHHHHHHHHHhchhHHH----------HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCC
Confidence 999999999999988765 4445555555555555443 22233334444444333 34455555556666
Q ss_pred cc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
++ |+++.|+.+...+++..++|.+.|.+.|.
T Consensus 332 ~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 332 AELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 99999999999999999999999998876
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=5.9e-23 Score=174.80 Aligned_cols=236 Identities=17% Similarity=0.209 Sum_probs=163.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+.+..+|..++|.+++.+.+. .+||+.|++.+++.++..++..+.+||+++++++.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 180 (377)
T PRK11102 105 RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-FSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHL--- 180 (377)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCCh---
Confidence 5789999999999999999999999999999999987 899999999988888776666677777543221110000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++...++++++++|.++...+..++.....+.+..+.|.++.+.+|+++.+.+.......++.+++.+
T Consensus 181 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 248 (377)
T PRK11102 181 ------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTI 248 (377)
T ss_pred ------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11123456788899888877777777777778888889888887899999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH---HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGS---AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (318)
+.|++.||+|+|+.+ ..+..+. .+........+..............+..............+..|+
T Consensus 249 ~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (377)
T PRK11102 249 INSRFVRRVGALNML----------RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH 318 (377)
T ss_pred HHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc
Confidence 999999999999865 3333222 222222222222222112222122222222233333445566787
Q ss_pred chhhHHHHHHHHHH-HHHhHhhhhhh
Q psy4758 239 FAGTLMGFTNGCAN-IASILGPLFVG 263 (318)
Q Consensus 239 ~~~~~~g~~~~~~~-~g~~~~~~~~g 263 (318)
+++++.++.+.... ++..+++.+.+
T Consensus 319 ~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 319 MAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999877654 55666666644
No 44
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=2.1e-23 Score=187.19 Aligned_cols=279 Identities=16% Similarity=0.109 Sum_probs=186.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPA 69 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~ 69 (318)
+|++|+++|++.++++.++..+|.++++.++..+... ..+||+.|++.++++++. ++..+++||+|+
T Consensus 281 sE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPr 359 (742)
T TIGR01299 281 AEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPR 359 (742)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHH
Confidence 5889999999999999999999999999888776542 136999998887766554 566778899986
Q ss_pred CCCC-CChhHhhhhhhcc------------------------Ccc---c-cccccC----------------Ccchhhhh
Q psy4758 70 QHPF-ISLEERIYIETSL------------------------VHS---S-TVSSSM----------------KVPWKAIL 104 (318)
Q Consensus 70 ~~~~-~~~~~~~~~~~~~------------------------~~~---~-~~~~~~----------------~~~~~~~~ 104 (318)
.... .+.++.....++. ..+ + ++.... ..++++++
T Consensus 360 wL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf 439 (742)
T TIGR01299 360 FFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCF 439 (742)
T ss_pred HHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHc
Confidence 2100 0001000000000 000 0 000000 01244555
Q ss_pred cc---hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh----h-------------------------------------cc
Q psy4758 105 TS---LPVWAVLITHLCQNWGYWTLLTEMPSYINSV----L-------------------------------------QF 140 (318)
Q Consensus 105 ~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~-------------------------------------g~ 140 (318)
+. ++.+.+++.+++..++++++..|+|.++.+. + |+
T Consensus 440 ~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (742)
T TIGR01299 440 NPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGL 519 (742)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcc
Confidence 54 4567788889999999999999999886441 0 00
Q ss_pred -----e---------------e-----------------------------------------------------echhh
Q psy4758 141 -----D---------------I-----------------------------------------------------KSNGF 147 (318)
Q Consensus 141 -----~---------------~-----------------------------------------------------~~~~~ 147 (318)
+ . .....
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 599 (742)
T TIGR01299 520 KFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYF 599 (742)
T ss_pred cccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHH
Confidence 0 0 00122
Q ss_pred hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758 148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
...+..++.+++.+++|+++||+|||+.+ ..++++.+++.+++.+.++.....+..++++++ .....+.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~-~~~~~~~ 668 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGNSESAMIALLCLFGGL-SIAAWNA 668 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-HHHHHHH
Confidence 24455688899999999999999999976 667777777777776665544333333333333 3334556
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
...+..|++|++ |++++|+.+...++|++++|.+++.+.+. +...+|++.+++.++++++.++++
T Consensus 669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-----~~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-----TKAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhCC
Confidence 777888998888 99999999999999999999999988765 245677777777777777666664
No 45
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=6.6e-23 Score=175.81 Aligned_cols=255 Identities=15% Similarity=0.141 Sum_probs=170.2
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+.+..+|.++++.+++.+.+. .|||+.+++.++.+++... ..++.|++++. + ++
T Consensus 138 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~-~~--- 207 (399)
T PRK05122 138 IGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW-GGLAGLGLLIMLLALLGLL----LARPRPAVPPV-K-GE--- 207 (399)
T ss_pred HhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHH----HHhcCCCCCCC-C-cc---
Confidence 4788999999999999999999999999999999888 8999998886665543321 12222221110 0 00
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+.++++.++ +++.......+....+.....+.|.|+++ .|. .+.+.......++.+++.+
T Consensus 208 ---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 267 (399)
T PRK05122 208 ---------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARL 267 (399)
T ss_pred ---------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHH
Confidence 012233333 22222233334455556677788888876 565 3455666777888899999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cch
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFA 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 240 (318)
+.|++.||+++|+.+ ..+..+..++.......++........++.+.+..... +.......+..| ++|
T Consensus 268 ~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~ 336 (399)
T PRK05122 268 LFGNLINRLGGLRVA----------IVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVF-PALGVEAVKRVPPQNR 336 (399)
T ss_pred HHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHH-HHHHHHHHHhCCHHHH
Confidence 999999999988865 45555555555555555443333333344444443332 332233334444 559
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
+++.|+.+...++|..++|.+.|.+.|. .+|+..+++.+++.+++.+.....+++++
T Consensus 337 g~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 337 GAALGAYSVFLDLSLGITGPLAGLVASW----FGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999988 67999999888888887777666655433
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.91 E-value=3.4e-23 Score=175.91 Aligned_cols=262 Identities=9% Similarity=-0.014 Sum_probs=177.8
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh-----CC------------CCCchHHHHHHHHHHHHHHHHHHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA-----GS------------PWGWPSIFYVSGAVAIVWAAAWCYI 63 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-----~~------------~~gWr~~f~~~~~~~~~~~~~~~~~ 63 (318)
+++|+|+++||+++|+.....++|..+++++...+. .. ..+||.++++..++.++..++.+++
T Consensus 152 vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 152 ISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367999999999999997777777766655554322 11 1458888888888888776777766
Q ss_pred hcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758 64 GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK 143 (318)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 143 (318)
.+|.|++ +....+.++++|+|+.|.+++.+++.+.++.++..++|.|+++.+ +..
T Consensus 232 ~~~~~~~-----------------------~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~ 286 (462)
T PRK15034 232 MNDIASS-----------------------RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDV 286 (462)
T ss_pred CCCcccc-----------------------ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChH
Confidence 5553321 111123557899999999999999999999999999999998844 333
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCc----hhHHHHHHHHHHH
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGD----NLVGAITCLTLAI 218 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~ 218 (318)
..........+...+..+++|+++||+|+++.+ .++++...+... .+...+. ........++...
T Consensus 287 ~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~ 356 (462)
T PRK15034 287 NILRLAFFGPFIGAIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLF 356 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence 333333444677888899999999999999876 334443333322 1222221 1112222222222
Q ss_pred HHhhhccccccccccccCcc----------------------chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchH
Q psy4758 219 AINAGTYTGFLSNHLDLSPN----------------------FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQ 276 (318)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 276 (318)
...+.......-...+.+|+ +.|.+.|+....+.+|+++-|.+.|...+.+ .++.
T Consensus 357 ~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---g~~~ 433 (462)
T PRK15034 357 LTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT---GSPV 433 (462)
T ss_pred HHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc---CCcH
Confidence 33333333444333344442 4778999999999999999999999998886 5688
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 277 TIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
..|+.+.+..+++.++.+....++
T Consensus 434 ~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 434 GAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 899999999999988887765443
No 47
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.91 E-value=4.8e-23 Score=176.13 Aligned_cols=259 Identities=12% Similarity=0.098 Sum_probs=171.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++|+.....++|..+||.+++++. . .|||+.|++.++..++..++..+..||.++++. +
T Consensus 125 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~---~----- 194 (400)
T PRK11646 125 IKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-YDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV---R----- 194 (400)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hhHHHHHHHHHHHHHHHHHHHHHhCCccccccc---c-----
Confidence 57889999999999999999999999999999998 4 899999999888777765555555554321100 0
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++.+.++++++++|.++...+..+...........++|.|+++. +.++.+.+.+.+...+....+..
T Consensus 195 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~ 261 (400)
T PRK11646 195 ------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLY 261 (400)
T ss_pred ------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHH
Confidence 11123466788898887665555544444444567889999884 44778888887777776665555
Q ss_pred HHHHhHHH-HhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-c
Q psy4758 162 VFSWLADY-IVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-F 239 (318)
Q Consensus 162 ~~g~l~dr-~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (318)
..+++.|| ++.++.+ ..+.++.+++...+...++...........+.+.. ...+.......+..|+ +
T Consensus 262 ~~~~~~~~r~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~ 330 (400)
T PRK11646 262 PIARWSEKRFRLEHRL----------MAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSI-IAEPARETLSASLADARA 330 (400)
T ss_pred HHHHHHHHhcchhHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCccc
Confidence 55665554 5444432 44555556666555555443322222233333333 3334445555566555 5
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
||+++|+.+...++|..+||.+.|.+.|.+++.......+...+.+.+++.+...
T Consensus 331 ~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 331 RGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred chhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999853222234555555555555544433
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.91 E-value=8.6e-23 Score=173.80 Aligned_cols=251 Identities=12% Similarity=-0.010 Sum_probs=186.1
Q ss_pred CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhcc
Q psy4758 7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSL 86 (318)
Q Consensus 7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (318)
+++|++.+|......++|.+++|++++.+.+. +|||..|++.+...++. ++.. .++|+++++++. ++++
T Consensus 123 ~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-~g~~~~f~~~~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~------ 191 (382)
T TIGR00902 123 QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-FDEQNILAILTAGLAFM-LIGF-LIKPTIPPKDAI--PEDE------ 191 (382)
T ss_pred HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHHHHHHHH-HHHH-HcCCCCCCCccc--cccc------
Confidence 47889999999999999999999999999998 89999998876553322 2333 333332111110 0000
Q ss_pred CccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHh
Q psy4758 87 VHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWL 166 (318)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 166 (318)
+.+..+.++++|+|+++...+..++...+...+..+.|.|+++ .|.++.+.|.+.....++.+++.++.+++
T Consensus 192 -------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l 263 (382)
T TIGR00902 192 -------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKL 263 (382)
T ss_pred -------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHH
Confidence 1122346789999999999998898888999999999999988 89999999999998889999999999999
Q ss_pred HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758 167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF 246 (318)
Q Consensus 167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (318)
.||++.|+.+ ..+.+...+....+.+.++.+.......+.+..+.... +....+..+.++++++++.++
T Consensus 264 ~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~-~~~~~~i~~~~~~~~~~~q~~ 332 (382)
T TIGR00902 264 FQNCSARDLL----------LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCH-LAAMRYIAAQPGSEIAKLQAL 332 (382)
T ss_pred HhhCCHHHHH----------HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhhHHHHHHH
Confidence 9999999876 67777888777777766555434444555555544433 334445556644459999999
Q ss_pred HHH-HHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758 247 TNG-CANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 247 ~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
++. ...+|..++|.++|++.|. .++ ..|...+++.+++.++
T Consensus 333 ~~~~~~g~g~~~g~~~~G~l~~~----~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 333 YNALAMGGLIAIFTAFAGFIYPT----LGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----ccH-HHHHHHHHHHHHHHHH
Confidence 874 5678999999999999999 454 5676777766665444
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.9e-23 Score=183.78 Aligned_cols=256 Identities=13% Similarity=0.124 Sum_probs=184.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-ChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI-SLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (318)
.|++|+++|++++++...+..+|..++|.+++++.+. .+||+.|++.++++++..++..+.+||+++++++. +.....
T Consensus 116 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~ 194 (485)
T TIGR00711 116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-YHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLL 194 (485)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-cCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHH
Confidence 5889999999999999999999999999999999998 99999999999888877677777777654332211 110000
Q ss_pred -----------hhhhccCccc-----------------------cccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy4758 81 -----------YIETSLVHSS-----------------------TVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTL 126 (318)
Q Consensus 81 -----------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (318)
...+..+.+. +..++++....+++++|.++...+..++.....+..
T Consensus 195 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (485)
T TIGR00711 195 LLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGS 274 (485)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 0000000000 000111122246788999998888888888888889
Q ss_pred HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh--cC
Q psy4758 127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF--VG 204 (318)
Q Consensus 127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~ 204 (318)
..++|.|+++.+|+++.+++.......++.+++.++.|++.||+++|+.+ ..+..+..++...+.. .+
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~g~~~~~~~~~~~~~~~~~ 344 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV----------TIGLILYAVGFYWRAFTFTP 344 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----------HHHHHHHHHHHHHHhccCCC
Confidence 99999999998999999999999999999999999999999999998865 5566666666555542 12
Q ss_pred ch-hH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 205 DN-LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 205 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+. .. .....++.+.+.+....+.......+.++++++++.|+.+..+++|+.+|+.+.+.+.++
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 21 333334444444443334444444555556699999999999999999999999998875
No 50
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=9.1e-23 Score=176.50 Aligned_cols=240 Identities=12% Similarity=0.137 Sum_probs=149.2
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh--------CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--------GSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP 72 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~--------~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (318)
++|++|+++|++++++...+.++|..+++.+++.+. +. .|||++|++..+...+ .++.++.+++.+
T Consensus 142 ~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~-~gWr~~f~~~~~~~~~-----~~~~~~~~~e~~ 215 (434)
T PRK15075 142 LAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAE-WGWRIPFLIGCLIVPF-----IFLIRRSLEETE 215 (434)
T ss_pred HHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cchHHHHHHHHHHHHH-----HHHHHHhcCCCH
Confidence 368999999999999999998888888888877763 34 8999999975433221 112223222211
Q ss_pred CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758 73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAV-LITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA 151 (318)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 151 (318)
+ ..++. + + .+.+..+++..++++.+.. .+..++....++....|.|.|+++.+|++..+.++....
T Consensus 216 ~---~~~~~--~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 282 (434)
T PRK15075 216 E---FLARK--H------R--PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLC 282 (434)
T ss_pred H---HHHhh--h------c--cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 0 00000 0 0 1111224444555555443 333444566677888999999998889999988888888
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH-HHHHH-Hh-cCchhH-HHHHHHHHHHHHhhhcccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA-ALVGL-SF-VGDNLV-GAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (318)
..++++++.++.|+++||+++|+.+ ..+..+..+ ..... .. ..+... ......+.+.+. +...+.
T Consensus 283 ~~~~~~~~~~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~ 351 (434)
T PRK15075 283 VGVSNFIWLPIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY-GSYNGA 351 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH-HHHHhh
Confidence 8899999999999999999999865 222222211 11111 11 111111 112122222222 222333
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCC
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNT 270 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~ 270 (318)
......|..|++ |+++.|+.+...+. ++.++|.+.|++.|..+
T Consensus 352 ~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 352 MVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 334556667766 99999997666554 58889999999999853
No 51
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=4.2e-22 Score=170.89 Aligned_cols=236 Identities=16% Similarity=0.128 Sum_probs=164.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|++++++..+.......+|..++|.+++++.+. .|||+.|++.+++.++..++.+ .++|+++++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------- 189 (401)
T PRK11043 120 IDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-FGWQAIFATLFAITLLLILPTL-RLKPSKKARKQ-------- 189 (401)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHH-HcCCCCCcccc--------
Confidence 5889999999999999999999999999999999988 8999999998888777655444 34443321110
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++++.++++++|+|+++...+........++....+.|.++++ .|+++.+.+.......++..++.+
T Consensus 190 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~ 256 (401)
T PRK11043 190 ------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGY 256 (401)
T ss_pred ------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1112346788889888876666666666777778889998877 799999999888878888999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
+.+++.||+++|+.... ......+..+.+...... .+... ........+.+. +...+.......+..|++
T Consensus 257 ~~~~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 328 (401)
T PRK11043 257 GCRAALQKWGGEQLLPW-------LLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAAN-GAIYPIVVAQALRPFPQA 328 (401)
T ss_pred HHHHHHHHcCHHHHHHH-------HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCccc
Confidence 99999999998875411 112222222222222221 22222 222222333333 333344444444556778
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+|++.|+.+..+..++..++.+.|.+.|.
T Consensus 329 ~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 329 TGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999875
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.90 E-value=2.6e-22 Score=171.69 Aligned_cols=231 Identities=14% Similarity=0.086 Sum_probs=154.2
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+....+|..++|.+++.+.+. .+||+.|++.++++++..++....+||+++++++.+
T Consensus 117 ~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------ 189 (392)
T PRK10473 117 RDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-FPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAA------ 189 (392)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCc------
Confidence 5789999999999999999999999999999998877 899999999998888877777777777643221100
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
.......++.+++|.++...+...+.......+..+.|.++++.+|+++.+.+.......++.+++.+
T Consensus 190 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 257 (392)
T PRK10473 190 ------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSF 257 (392)
T ss_pred ------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01112344667888877666665555555566677788888887899999999998999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc--
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-- 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (318)
+.+++.||+++|+.+ ..+..+..++...+..................+........ ...+..|.+
T Consensus 258 ~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~ 324 (392)
T PRK10473 258 STPFALGIFKPRTLM----------LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA---MSQALGPFSLR 324 (392)
T ss_pred HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHhccCccc
Confidence 999999999999865 45555555555554444333322222222222222221111 112233332
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.+.+.++ ..++..+++.+.+++.+.
T Consensus 325 ~g~~~~~----~~~~~~~g~~~~~~l~~~ 349 (392)
T PRK10473 325 AGVASST----LGIAQVCGSSLWIWLAAV 349 (392)
T ss_pred ccHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 3444444 445555666666666665
No 53
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=4.9e-23 Score=177.60 Aligned_cols=264 Identities=14% Similarity=0.134 Sum_probs=176.9
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV 87 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (318)
+++++.+|......++|..++|++++.+.+ .+||++|++.++++++..++.++..+|++++.+.. +++..
T Consensus 137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------- 206 (420)
T PRK09528 137 RRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-NALGA------- 206 (420)
T ss_pred hhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-cchhc-------
Confidence 467788899999999999999999999876 58999999988887776555554444433221100 00000
Q ss_pred ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh---cceeechhhhchHHHHHHHHHHHHHH
Q psy4758 88 HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL---QFDIKSNGFLSAAPYLAQWILILVFS 164 (318)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g 164 (318)
+++ +....+.++.+|||.++...+..+.....+.....+.|.|+.+.. +.+..+.+.+.+...+...++.++.|
T Consensus 207 -~~~--~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 283 (420)
T PRK09528 207 -NAS--AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAP 283 (420)
T ss_pred -ccc--cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 112233556788998877666555555555556667788876643 45556778888888888999999999
Q ss_pred HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH
Q psy4758 165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL 243 (318)
Q Consensus 165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (318)
++.||+++|+.+ ..+.++..+...+..+.++.+.......+.+..... .......+..+..|++ +++.
T Consensus 284 ~l~dr~g~~~~~----------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~a~~ 352 (420)
T PRK09528 284 FIINRIGAKNAL----------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPF-LLVGVFKYITLNFDVRLSATI 352 (420)
T ss_pred HHHHHhCcchhh----------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCccceeee
Confidence 999999999976 556666666666666655544333333333332222 2223334444545555 8877
Q ss_pred HHH-HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 244 MGF-TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 244 ~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
.+. .+...++|..++|.+.|++.|. .+|+..|...+++.++..++.....++
T Consensus 353 ~~~~~~~~~~lg~~ig~~~~G~l~~~----~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 353 YLVGFQFAKQLGAVFLSTLAGNLYDS----IGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeehHHHHHHHHHHHHHHHHHHHHHh----hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 665 5777889999999999999998 679999998888877766655554443
No 54
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=1.2e-22 Score=173.74 Aligned_cols=257 Identities=19% Similarity=0.196 Sum_probs=170.3
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF 73 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (318)
++|++|+++|++.+++.+.+..+|.++++.++..+.. ...+||+.|++.+++.++. .......||+++.++
T Consensus 121 ~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 198 (394)
T TIGR00883 121 LAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFEK- 198 (394)
T ss_pred hhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHH-
Confidence 4689999999999999999999999999998876642 1279999999877665543 333344455432111
Q ss_pred CChhHhhhhhhccCccccccccCCcchhhhhcchh--HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758 74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLP--VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA 151 (318)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 151 (318)
++++. +..+.+.++.+++++ ++......++.....+....++|.|+++.+|.++.+.+.....
T Consensus 199 --~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 263 (394)
T TIGR00883 199 --AQEKH-------------KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLML 263 (394)
T ss_pred --HHhcc-------------ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHH
Confidence 00000 222345667777765 7777777777777888888999999988789999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH-HHHHhc-CchhHHHHHHHHHHHHHhhhcccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL-VGLSFV-GDNLVGAITCLTLAIAINAGTYTGFL 229 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (318)
..+...++.++.|++.||+++|+.+. ..+........ ...... .++...............+...+...
T Consensus 264 ~~~~~~~~~~~~g~l~dr~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (394)
T TIGR00883 264 SLILFFITIPLSGALSDRIGRRPVLI---------IFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMG 334 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHH---------HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999998551 11222222221 111121 22222222222222222333445556
Q ss_pred ccccccCccc-hhhHHHHH-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758 230 SNHLDLSPNF-AGTLMGFT-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF 286 (318)
Q Consensus 230 ~~~~~~~~~~-~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 286 (318)
....|..|++ |+++.++. +....+|+.++|.+.|++.|+.+ .|...++...++.
T Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g---~~~~~~~~~~~~~ 390 (394)
T TIGR00883 335 SFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG---DWYAIGYYLAALA 390 (394)
T ss_pred HHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC---cchhHHHHHHHHH
Confidence 6666777766 99999985 44456788899999999999842 2555555554443
No 55
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=4.9e-22 Score=175.51 Aligned_cols=274 Identities=13% Similarity=0.089 Sum_probs=175.8
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (318)
+.|++|+++|+++.++...+..+|.++++.++..+. +||+.|++.+++.++..+.. +++||+|+.... .+.++.
T Consensus 205 ~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a 279 (505)
T TIGR00898 205 NTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEA 279 (505)
T ss_pred hheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHH
Confidence 468999999999999999999999999999887653 49999999998887764444 678998752110 011111
Q ss_pred -hhhhh---cc-----------C-ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758 80 -IYIET---SL-----------V-HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK 143 (318)
Q Consensus 80 -~~~~~---~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 143 (318)
+..++ .. . +++.+.+.++.++++++++|.++...+......+........++.+..+ .+.+.
T Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 357 (505)
T TIGR00898 280 LKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNI- 357 (505)
T ss_pred HHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCh-
Confidence 00000 00 0 0000001123577889999887766655544433333222223333333 44442
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHhh
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL-VGAITCLTLAIAINA 222 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 222 (318)
.......++..+++.++.+++.||+|||+.+ ..+.++.+++.+++...++.. ........++.+...
T Consensus 358 --~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 358 --YLDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGIT 425 (505)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 2333455677888999999999999999866 556666666666665555442 222233333333333
Q ss_pred hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
...+....+..|.+|++ |++++|+.+....+|+.++|.+.+ + +. .++...+.+.+++.+++.+...++++.
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~----~~~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GE----KWLFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HH----HHHhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 44455667778888887 999999999999999999999998 4 33 345667777777777776666665543
No 56
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=1.2e-22 Score=174.44 Aligned_cols=264 Identities=13% Similarity=0.164 Sum_probs=162.6
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH-
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG--WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE- 78 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g--Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (318)
.|++|+++|++++++.+.+..+|.++++.+++.+.+. .+ ||+.|++.++..++. ++....+||+++..+..++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 203 (405)
T TIGR00891 126 IESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV-WGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKAL 203 (405)
T ss_pred HHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhh
Confidence 5889999999999999999999999999999998875 55 999998866555443 444555676543211111100
Q ss_pred h-hhhhhccCccccccc---cCCcchhhhhcc--hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHH
Q psy4758 79 R-IYIETSLVHSSTVSS---SMKVPWKAILTS--LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAP 152 (318)
Q Consensus 79 ~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~ 152 (318)
. +...+..++++.... +.....++..++ +.+........+..........++|.|+.+.+|+++.+.+.+....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 283 (405)
T TIGR00891 204 VRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFS 283 (405)
T ss_pred hhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHH
Confidence 0 000000000000000 000011111111 1122333333444455556678899999888899999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758 153 YLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 153 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
.++.+++.++.|++.||+++|+.+ ..+..+..+... ......+........+..+.+. ....+.....
T Consensus 284 ~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 352 (405)
T TIGR00891 284 NIGAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV-QGIWGILPKH 352 (405)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-ccchhhHHHH
Confidence 999999999999999999999876 333333322222 2222222221222223333222 2233444455
Q ss_pred ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758 232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI 281 (318)
Q Consensus 232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (318)
..+..|++ |++++|+.+...++++.++|.+.|.+.|..+ .|...+..
T Consensus 353 ~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g---~~~~~~~~ 400 (405)
T TIGR00891 353 LGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD---EYGTALAS 400 (405)
T ss_pred HhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc---ccchhHHh
Confidence 56666665 9999999999999999999999999999842 26555543
No 57
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=2.6e-23 Score=175.23 Aligned_cols=236 Identities=21% Similarity=0.317 Sum_probs=168.3
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++.+.+.++|.+++|.+++.+.+. .+||+.|++.+++.++..++...++++++++++..++++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~ 189 (352)
T PF07690_consen 111 ADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-FGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESES 189 (352)
T ss_dssp HHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-CHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-
T ss_pred cccchhhhhhhccccccchhhhhhhcccchhhhhhhc-cccccccccccchhhhhhhhHhhhhhhccccccccccccccc
Confidence 5899999999999999999999999999999999977 899999999999998876655566666554433322222100
Q ss_pred hhhccCccccccccCCc-chhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce-eechhhhchHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKV-PWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD-IKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~ 159 (318)
+ .+.+.. .++.++++|.+|......+...........+.|.|+++.+|++ ..+.+.......+...++
T Consensus 190 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (352)
T PF07690_consen 190 ---------K-KPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIG 259 (352)
T ss_dssp -----------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHH
T ss_pred ---------c-cccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 011222 3677888888875666666666678889999999988889999 789998999999999999
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHHhhhccccccccccccC
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
.++.|++.||+++++.. ........+....+.... +........++.+. ..+...+.......+..
T Consensus 260 ~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 328 (352)
T PF07690_consen 260 SLLAGRLSDRFGRRRRL----------LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF-GFGIVFPILFSLIQELV 328 (352)
T ss_dssp HHHHHHHHHHTTCHHHH----------HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence 99999999999987644 223333333333332222 22223334444455 34445666666777777
Q ss_pred ccc-hhhHHHHHHHHHHHHHhHhh
Q psy4758 237 PNF-AGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 237 ~~~-~~~~~g~~~~~~~~g~~~~~ 259 (318)
|++ +|++.|+.+...++++.++|
T Consensus 329 ~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 329 PPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 655 99999999999999999987
No 58
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=1e-21 Score=167.96 Aligned_cols=250 Identities=14% Similarity=0.169 Sum_probs=165.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+|+|++++++.+.+...|.+++|++++.+.+. .|||+.+.+..+..++. +.+.++.|+.+++. ++
T Consensus 138 ~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~--- 207 (392)
T PRK12382 138 LGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH-FGFAALALTTMVLPLLA----WAFNGTVRKVPAHA--GE--- 207 (392)
T ss_pred HhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHH----HHHHHhccCCCCCc--cc---
Confidence 4788999999999999999999999999999999887 89999877655443332 11222222211100 00
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+ .+.++.++ .++...+..++..........+.|.|+++ .|++ +.+.......++.+++.+
T Consensus 208 ------------~---~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~ 267 (392)
T PRK12382 208 ------------R---PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRV 267 (392)
T ss_pred ------------C---chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHH
Confidence 0 01222221 12222222233344555667788888877 5654 345556667777889999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccC-ccch
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLS-PNFA 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 240 (318)
+.|++.||+++|+.+ ..+..+..++...+...++.........+.+.+... ..+.......+.. +++|
T Consensus 268 ~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~ 336 (392)
T PRK12382 268 LFGWMPDRFGGVKVA----------IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVR 336 (392)
T ss_pred HHHHHHHhcCCCeeh----------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHH
Confidence 999999999999876 555566666665555554433233333333433332 3333333334444 4559
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
|++.|+.+...++|..++|.+.|.+.|. .+|+..|.+.+++.+++.+.....
T Consensus 337 g~~~g~~~~~~~~g~~ig~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 337 GTALGGYAAFQDIAYGVSGPLAGMLATS----FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 689999999888888777766544
No 59
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=1.7e-22 Score=178.16 Aligned_cols=271 Identities=14% Similarity=0.128 Sum_probs=158.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh-h
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER-I 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 80 (318)
.|++|+++|++++++...+..+|..+++.+++.+.+. .+||+.|++..+.. +..++....+||+++.++..++++. +
T Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w~~~f~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~ 211 (496)
T PRK03893 134 IESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV-WGWRALFFIGILPI-IFALWLRKNLPEAEDWKEKHAGKAPVR 211 (496)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHH-HHHHHHHHhCCCchhhhhhccccccch
Confidence 5789999999999999999999999999999999988 99999998754433 3223333444554321110000000 0
Q ss_pred hhhhccCccccccccCCc------chhhhh-------------------------------cchhHHHHHHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKV------PWKAIL-------------------------------TSLPVWAVLITHLCQNWGY 123 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~------~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~ 123 (318)
...+.....+++...... .....+ +.+.........+......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (496)
T PRK03893 212 TMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYS 291 (496)
T ss_pred hHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhcc
Confidence 000000000000000000 000000 0000001111111111111
Q ss_pred HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758 124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV 203 (318)
Q Consensus 124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 203 (318)
+....++|.|+++.+|+++.+++.+.+...++.+++.++.|+++||+++|+.+ ..+..+..+..+.....
T Consensus 292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~ 361 (496)
T PRK03893 292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY----------VCSLLISQLLIIPVFAI 361 (496)
T ss_pred chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHhhc
Confidence 23557899999877999999999999999999999999999999999999865 33444444433333322
Q ss_pred CchhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758 204 GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI 281 (318)
Q Consensus 204 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (318)
.+... ..........+......+.......+..|++ |++++|+.+...++|+.++|.+.|.+.|. .+|...+..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~----~g~~~~~~~ 437 (496)
T PRK03893 362 GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR----LDLGTALAS 437 (496)
T ss_pred cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc----CChHHHHHH
Confidence 22222 2212222111222223344445566666665 99999999999999999999999999998 567777655
Q ss_pred HHHHHHH
Q psy4758 282 AAAIFFF 288 (318)
Q Consensus 282 ~~~~~~~ 288 (318)
.+.+..+
T Consensus 438 ~~~~~~~ 444 (496)
T PRK03893 438 LSFSLTF 444 (496)
T ss_pred HHHHHHH
Confidence 5444333
No 60
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.90 E-value=9.5e-22 Score=168.03 Aligned_cols=255 Identities=12% Similarity=0.098 Sum_probs=173.6
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI 82 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (318)
|+.++++++...+....+..+|.++|+...+++.+. .|||.+|++.+++.++..+..++..|+++++++. +
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~-~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~----~---- 194 (390)
T TIGR02718 124 EHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK-FGQRPAFLLVACVPLASLVCVLWLKDRAVASPEA----P---- 194 (390)
T ss_pred HhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc----c----
Confidence 455666777788888888899999999888888888 8999999999988877655544443332211110 0
Q ss_pred hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH-HHHHHHH
Q psy4758 83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILIL 161 (318)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 161 (318)
+.+..++++++|+|.++......++...+......+.+.|++| .|+++++.|.+...... ..+++.+
T Consensus 195 -----------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~ 262 (390)
T TIGR02718 195 -----------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCG 262 (390)
T ss_pred -----------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHH
Confidence 1111346788999998888888888888888888899999988 79999999998887764 6677889
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH-HHHHHhc----CchhHHHHHHHHHHHHHhhhcccccccc-cccc
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA-LVGLSFV----GDNLVGAITCLTLAIAINAGTYTGFLSN-HLDL 235 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (318)
+.|++.||+++|+.+ ..+..+.++. ....... ............+.....+...+..... ....
T Consensus 263 ~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 332 (390)
T TIGR02718 263 GGAWLVRRAGLWRTF----------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFA 332 (390)
T ss_pred HHHHHHHHhhHHHHH----------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999865 3333322111 1111111 1111121222222222222222333333 3334
Q ss_pred Cc-cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758 236 SP-NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 236 ~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
.+ +++++.+++.+...++|..++|.+.|.+.|. .+|+..|...+++.+++.+.
T Consensus 333 ~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~----~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 333 GDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR----FGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHHHHH
Confidence 44 4599999999999999999999999999998 67888888877766665443
No 61
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=8.3e-22 Score=169.16 Aligned_cols=243 Identities=7% Similarity=-0.031 Sum_probs=162.9
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+++|++++++...+..+|..++|.+++.+.+. .|||+.|++.+++.++..+..++.+||+++++++..+ .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~--- 204 (413)
T PRK15403 130 QEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-VHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-A--- 204 (413)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-h---
Confidence 5789999999999999999999999999999999887 8999999999988887766656667876532211000 0
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+....++++++|||.++...+..++.....+.+..+.|.++++.+|+++.+.++.......+..+++.
T Consensus 205 ------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~ 272 (413)
T PRK15403 205 ------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANA 272 (413)
T ss_pred ------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11123567889999999988888888888888888999999998899999999988888888888888
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (318)
+.+++.++..+++..... .....++..+..++.. ...+... ......+.+.+..... +........-.+..+
T Consensus 273 l~~~~~~~~~~~~~~~~~---~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~-p~~~~~al~~~~~~~ 345 (413)
T PRK15403 273 IVARFVKDPTEPRFIWRA---VPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIF-PTLFRFTLFSNNLPK 345 (413)
T ss_pred HHHHHhccCCchhHHHHH---HHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHh-HHHHHHHhccCCCCC
Confidence 887766544443322100 0011112211111111 1222221 2223333333333322 222222212222238
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
|++.++.+.....+...++...+++.+.
T Consensus 346 G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 346 GTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999988766
No 62
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.89 E-value=2.1e-21 Score=165.33 Aligned_cols=250 Identities=10% Similarity=0.031 Sum_probs=176.4
Q ss_pred CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhcc
Q psy4758 7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSL 86 (318)
Q Consensus 7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (318)
+++|+++++......++|.++||++++++.++ +|||..|++.++..++. .+..+..||.+++.+ ++++
T Consensus 123 ~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-~g~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~------ 190 (382)
T PRK11128 123 QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILTAGVASM-LLGQLLRPTIMPQGE----SRQQ------ 190 (382)
T ss_pred HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHHHHHHHH-HHHHHccCCCCCccc----cccc------
Confidence 35788999999999999999999999999998 89999999877654443 333333444321110 0000
Q ss_pred CccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHh
Q psy4758 87 VHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWL 166 (318)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 166 (318)
. ++...++++++|+|.++...+..++..........+.|.|+++ .|.++.+.|.+.+...++.++..++.+++
T Consensus 191 ----~--~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 263 (382)
T PRK11128 191 ----E--SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRL 263 (382)
T ss_pred ----c--ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1123467899999999988888887777777788888999977 89999999999888888899999999999
Q ss_pred HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758 167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF 246 (318)
Q Consensus 167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (318)
.||+++|+.+ ..+.+..++....+...++.+......++.+.+... ..+....+..+..++++++..+.
T Consensus 264 ~~r~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 332 (382)
T PRK11128 264 FRRWSARDLL----------LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV-CHLAAMRYIAARPGSEVIRLQAL 332 (382)
T ss_pred HHHCCHHHHH----------HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHhhhHHHHHH
Confidence 9999999865 556666666666666555444333334444444333 34444455556666668888888
Q ss_pred HHHH-HHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758 247 TNGC-ANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNL 291 (318)
Q Consensus 247 ~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (318)
.+.. ..+|..+||.++|.+.|. .++ ..++..+++.+++++
T Consensus 333 ~~~~~~~~g~~ig~~i~G~l~~~----~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 333 YSALAMGGSIAIMTVLSGFLYQH----LGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----ccH-HHHHHHHHHHHHHHH
Confidence 8644 566778999999999998 444 355555555554433
No 63
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=1.3e-21 Score=166.99 Aligned_cols=267 Identities=11% Similarity=0.005 Sum_probs=175.6
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
+.|++|+++|++++|+.+....+|.++||.+++++.+. .|+..+.+.+...++. .+..+.+||+|+++++.+.++..
T Consensus 113 i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 189 (393)
T PRK11195 113 LTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIA 189 (393)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHH
Confidence 35899999999999999999999999999999999885 4888887766554433 44456677765432211111100
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
.. ++....++.++++|.+........+............|.|+++.+|.++.+.|.+.....++.++++
T Consensus 190 ~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 190 LL-----------RDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred HH-----------HHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 00 0111224567888877655555444455555666777888888899999999999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF- 239 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (318)
+..+++.||.++++.+ ..+.. .++....+...++.+......++.+.+..... +......++..|++
T Consensus 259 ~~~~~l~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~-~~~~~~~q~~~~~~~ 326 (393)
T PRK11195 259 GAAARLVTLETVLRVL----------PAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFV-VPMNALLQHRGHVLV 326 (393)
T ss_pred HHHHHHhcCCcccchH----------HHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhh-hhHHHHHHhhCcccc
Confidence 9999999998877654 33332 22333333333322212233334444433333 33444455666664
Q ss_pred -hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 240 -AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 240 -~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+|++.++.+..++++..++..+.+.+ +. .+.+..+++.+...+++..+...++.
T Consensus 327 ~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 327 GAGHSIAVQNFNENLAMLLMLGLYSLL-VK----LGVPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred cchhHHHHHhHHHHHHHHHHHHHHHHH-HH----cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999865 44 45556666655555555555544443
No 64
>KOG2504|consensus
Probab=99.88 E-value=4.1e-22 Score=172.46 Aligned_cols=280 Identities=17% Similarity=0.241 Sum_probs=206.6
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC---------
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF--------- 73 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 73 (318)
.|| +|+|+.+.|+..++.++|.++-|.+..++.+. .|||+.+++.+.+.+-.........|..++..+.
T Consensus 162 ~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~-~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~ 239 (509)
T KOG2504|consen 162 TYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK-YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSA 239 (509)
T ss_pred hHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccc
Confidence 445 58999999999999999999999999999998 9999999999998877766666665533322111
Q ss_pred -----------CCh--hHhhhhh------hccCccccccc--cCCcc----hhhhhcchhHHHHHHHHHHHHHHHHHHHh
Q psy4758 74 -----------ISL--EERIYIE------TSLVHSSTVSS--SMKVP----WKAILTSLPVWAVLITHLCQNWGYWTLLT 128 (318)
Q Consensus 74 -----------~~~--~~~~~~~------~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (318)
... ++..... +..++.+++.. ..+.. ..+++++|.++.+.+...+...+++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~ 319 (509)
T KOG2504|consen 240 ASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFV 319 (509)
T ss_pred ccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000 00000000000 11111 25789999999999999999999999999
Q ss_pred hhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH
Q psy4758 129 EMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV 208 (318)
Q Consensus 129 ~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (318)
++|.|..+ .|++..++..+.+..++..+++.++.|+++|+...++.. ...++.+..+++.+..+...+...
T Consensus 320 ~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~--------~~~~~ll~~gl~~~~~p~~~~~~~ 390 (509)
T KOG2504|consen 320 YLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV--------LFLLTLLIAGLARLFLPFATTYVG 390 (509)
T ss_pred HHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH--------HHHHHHHHHHHHHHHHHHhccHHH
Confidence 99999996 999999999999999999999999999999998854432 236677777777777777776654
Q ss_pred HHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758 209 GAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF 287 (318)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 287 (318)
+...+.+++...+.. .........+..+ ++-..+.|+...++.++..+||++.|++.|.+ .+|...|+..+++.+
T Consensus 391 l~~~~~~fG~~~g~~-~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t---g~Y~~~f~~~g~~~~ 466 (509)
T KOG2504|consen 391 LIVFSILFGFCVGSF-SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT---GNYDHAFYFCGLCFL 466 (509)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc---CCeeeehhhcChHHH
Confidence 555555555544433 3333334445554 45999999999999999999999999999996 458999999999999
Q ss_pred HHHHHHHhhc
Q psy4758 288 FGNLIFLIFG 297 (318)
Q Consensus 288 ~~~~~~~~~~ 297 (318)
++.+..+..+
T Consensus 467 ~s~~~~~~~~ 476 (509)
T KOG2504|consen 467 LSAVLLLILR 476 (509)
T ss_pred HHHHHHHHhH
Confidence 9887776665
No 65
>PRK10054 putative transporter; Provisional
Probab=99.88 E-value=9.4e-22 Score=167.91 Aligned_cols=256 Identities=14% Similarity=0.111 Sum_probs=174.5
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+|.+|+++|++++++.....++|.+++|.+++.+.+ .+||.+|++.++..++..++..+++||+++++++ +++
T Consensus 122 ~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~--~~~--- 194 (395)
T PRK10054 122 ADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT--ETG--- 194 (395)
T ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc--chh---
Confidence 467788899999999999999999999999999875 6899999998877777655555556654322110 000
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceeechhhhchHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
+ ..+.++++|||+++...+..++..........+.+.|+.+. .+.+....+.......+.....
T Consensus 195 ------------~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 260 (395)
T PRK10054 195 ------------S--VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSL 260 (395)
T ss_pred ------------h--hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeee
Confidence 0 01135678899998888777777777666666777777542 3555566677777766666777
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN 238 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (318)
.+..|++.||.++|+.+ ..++.+..++...+....++.. +.+.....+.+.. ...+.......+..|+
T Consensus 261 ~~~~g~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~ 329 (395)
T PRK10054 261 QYSVGRRLNAANIRPLM----------TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPP 329 (395)
T ss_pred hhHHHHHHccCCchhHH----------HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCc
Confidence 78889999999888765 4555555666555544333332 3333333333332 2334445556566666
Q ss_pred c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+ ++++.+..+ ...+|..+||.++|.+.|+ .++...+.+.+.+..+..++..
T Consensus 330 ~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 330 GMKASYFSAQS-LGWLGAAINPLVSGVILTT----LPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred ccceehHhHHH-HHHHHHHHHHHHHHHHHHH----cChhhHHHHHHHHHHHHHHHHH
Confidence 5 999988754 6778999999999999999 6777777766655555444443
No 66
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.88 E-value=8e-22 Score=166.52 Aligned_cols=224 Identities=12% Similarity=0.065 Sum_probs=156.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC--------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG--------WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF 73 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g--------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (318)
.|++|+|+|+++.++...+..+|.++++.+++.+.+. .+ ||..|++.++..++..+..++..||++++++.
T Consensus 109 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~ 187 (356)
T TIGR00901 109 LEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-EFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV 187 (356)
T ss_pred HHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc
Confidence 5889999999999999999999999999999998877 67 99999999887776544444445664322111
Q ss_pred CChhHhhhhhhccCccccccccCCcchhhhhcchh---HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch
Q psy4758 74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLP---VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA 150 (318)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~ 150 (318)
++++. ++.+.++++++++|. ++...+..++.....+....+.|.|+++ +|+++.+.+....
T Consensus 188 -~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~ 251 (356)
T TIGR00901 188 -PKPLT--------------QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAK 251 (356)
T ss_pred -chhHH--------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhH
Confidence 11110 111234667777775 7777777777788888889999999998 8999999988877
Q ss_pred HHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC----------chhHHHHHHHHHHHH
Q psy4758 151 APY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG----------DNLVGAITCLTLAIA 219 (318)
Q Consensus 151 ~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 219 (318)
..+ +..+++.+++|++.||+|+|+.+ ..+.++.++....+.+.. +..........+...
T Consensus 252 ~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (356)
T TIGR00901 252 INGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAV 321 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Confidence 666 56889999999999999998865 444444444444333221 122222333333333
Q ss_pred HhhhccccccccccccCccc-hhhHHHHHHHHHH
Q psy4758 220 INAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCAN 252 (318)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 252 (318)
..+...+.......+..|++ ||+.+|+.+...+
T Consensus 322 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 322 TGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 33445566666666776666 9999999887765
No 67
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.88 E-value=1.4e-21 Score=187.96 Aligned_cols=259 Identities=13% Similarity=0.043 Sum_probs=179.7
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
+.|++|+++|++++|+.+++.++|.++||++++++... .+|++.|+..++..+ .+++..+.+|++++..+....+...
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-GNFVILVALLMGIAV-LGWLASLFIPKTGNAAPDLKIDRNI 210 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHH-HHHHHHhhCCCCCCCCCCCeeccch
Confidence 45889999999999999999999999999999999998 899999944444444 3355556666654322211100000
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
. +.....++.+.++|.++...+..++..+....+..++|.|+++.+|.++.+.|++.+...++.+++.
T Consensus 211 -~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 211 -I-----------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred -H-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 0 1111346778889999999888888888888888999999999899999999999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--------------------CchhHHHHHHHHHHHHH
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--------------------GDNLVGAITCLTLAIAI 220 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 220 (318)
++.|+++|+..+++.+ ..+.++.++..+.+.+. .+.+...+..++++.+.
T Consensus 279 ~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 348 (1140)
T PRK06814 279 FLASKLSEGRITLLYV----------PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAG 348 (1140)
T ss_pred HHHHHHhCCceeeeee----------hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHH
Confidence 9999999887776654 22222222222222221 22222333344444444
Q ss_pred hhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758 221 NAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF 287 (318)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 287 (318)
+.. .+...+..++..|++ +|+++|+.+...+++..+++.+.+.+.+.. .++...+++.+.+.+
T Consensus 349 ~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~---~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 349 GLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG---FSIPWIILFIALANL 412 (1140)
T ss_pred HHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHH
Confidence 333 333455555555555 999999999999999999999999987542 455555555444433
No 68
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.88 E-value=3.3e-21 Score=158.54 Aligned_cols=250 Identities=12% Similarity=0.043 Sum_probs=172.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC---------------CCchHHHHHHHHHHHHHHHHHHH-Hhc
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP---------------WGWPSIFYVSGAVAIVWAAAWCY-IGA 65 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------~gWr~~f~~~~~~~~~~~~~~~~-~~~ 65 (318)
++..|+|++++.+++.+...++|..++|.+++.+.... ..||++|++.+.+.++..+...+ -+|
T Consensus 36 ~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p 115 (310)
T TIGR01272 36 SILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLP 115 (310)
T ss_pred HHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 35568889999999999999999999999999877321 37999999777666555443322 223
Q ss_pred CCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceee
Q psy4758 66 NSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIK 143 (318)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~ 143 (318)
|.+++ .++++. .++....++++++|.++...+..+++.....++..|.+.|+.+. +|+++.
T Consensus 116 ~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~ 178 (310)
T TIGR01272 116 ELQEA---DVARVS--------------SGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPED 178 (310)
T ss_pred CCCcc---cccccc--------------cccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHH
Confidence 32111 000000 00001123567888899888888888888999999999999863 689999
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG 223 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (318)
+.+...+....+.++|+++++++.||+++|+.+ ..+..+..+...+....++.. .......++.+ .+.
T Consensus 179 ~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l----------~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~-~s~ 246 (310)
T TIGR01272 179 QAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL----------AFNAFLAVLLSIGAALTHGYV-AMWFVLALGLF-NSI 246 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHH-HHH
Confidence 999999999999999999999999999998865 444444444444444433322 22233334443 344
Q ss_pred ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHH
Q psy4758 224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAI 285 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 285 (318)
..+...+...+..|++.+++.++. ....+|+++.|.+.|.+.|. .+.+.++++...+
T Consensus 247 i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~----~g~~~a~~v~~~~ 303 (310)
T TIGR01272 247 MFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC----LGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh----ccchHHHHHHHHH
Confidence 555555555565666667777775 67889999999999999998 5667777644433
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.88 E-value=3.7e-21 Score=161.96 Aligned_cols=235 Identities=26% Similarity=0.455 Sum_probs=191.5
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++|+|+|++.+++.+...++|..+++.+++.+.+. .+||+.|++.+++.++..+...+. +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~---------------- 174 (352)
T cd06174 113 AEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILAILGLLLALLLLFL-L---------------- 174 (352)
T ss_pred HHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHH-H----------------
Confidence 5889999999999999999999999999999999987 889999999888877765554332 2
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
|.++...+..++..........+.|.+.++..|.+..+.+.......++..++.+
T Consensus 175 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (352)
T cd06174 175 -------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGAL 229 (352)
T ss_pred -------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566777788888888899999999999987799999999999999999999999
Q ss_pred HHHHhHHHHhhhc-CcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758 162 VFSWLADYIVAKQ-ILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF- 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (318)
+.+++.||+++|+ .+ ..+..+..++.......++...........+.+. ....+.......+..|++
T Consensus 230 ~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 298 (352)
T cd06174 230 LGGLLSDRLGRRRLLL----------LIGLLLAALGLLLLALAPSLALLLVALLLLGFGL-GFAFPALLTLASELAPPEA 298 (352)
T ss_pred HHHHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH-hccchhHHHHHHhhcCHHH
Confidence 9999999999998 65 5677777777777766655443334444444443 344556666666777755
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
|++.+|+.+...+++..++|.+.+.+.|. .+|+..+.+.+++.+++.+...
T Consensus 299 ~~~~~~~~~~~~~~~~~i~~~i~g~l~~~----~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 299 RGTASGLFNTFGSLGGALGPLLAGLLLDT----GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999987 6888899988888887776654
No 70
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=1.3e-21 Score=167.60 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=165.4
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+|++|+++|++++++...+..+|..+++.+++.+.+. .|||+.|++.+++.++..++...++||+++.....++++...
T Consensus 131 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (398)
T TIGR00895 131 SEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRR 209 (398)
T ss_pred HHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHH
Confidence 5789999999999999999999999999999999988 899999999887777776777777888764221111111110
Q ss_pred h----hhccCcc-------cccc-ccCCcchhhhhcc---hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechh
Q psy4758 82 I----ETSLVHS-------STVS-SSMKVPWKAILTS---LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNG 146 (318)
Q Consensus 82 ~----~~~~~~~-------~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~ 146 (318)
. .....++ ++.. +..+...+.++++ +..+...+..++.....+....+.|.+.++ .|+++.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 288 (398)
T TIGR00895 210 IVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAA 288 (398)
T ss_pred HHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHH
Confidence 0 0000000 0000 0111112223332 344555555666667777788888955554 899999999
Q ss_pred hhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccc
Q psy4758 147 FLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYT 226 (318)
Q Consensus 147 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
.......++.+++.++.|++.||+++|+.. ............+.....+........+..+.+... ..+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~ 357 (398)
T TIGR00895 289 TGGALFNFGGVIGSIIFGWLADRLGPRVTA----------LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNG-GQS 357 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHH----------HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH-HHH
Confidence 999999999999999999999999988432 222222222222222233333233334444444333 344
Q ss_pred cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
.......+..|++ |+++.|+.+...++|..++|.+.|++
T Consensus 358 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 358 GLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 5556666777666 99999999999999999999999876
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=1.2e-21 Score=170.05 Aligned_cols=241 Identities=18% Similarity=0.180 Sum_probs=164.1
Q ss_pred CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758 2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI 74 (318)
Q Consensus 2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (318)
.|.. +++||++..++.+.+..+|..+++.+.+.+.. ...+||+.+.+.++++++..++.++..||++++.+..
T Consensus 125 ~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~ 204 (437)
T TIGR00792 125 PAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN 204 (437)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc
Confidence 3555 56899999999999999988887766555442 1268999999999988887777777777765321110
Q ss_pred ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758 75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL 154 (318)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~ 154 (318)
+++ + .+....++++++||.++...+..++.....+....+.+.|.++..+ ++.+.+.+.....+
T Consensus 205 --~~~-----------~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i 268 (437)
T TIGR00792 205 --IEK-----------K--LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIV 268 (437)
T ss_pred --ccc-----------C--CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHH
Confidence 000 0 1122346778899999988888888877777776677777766555 45566677777788
Q ss_pred HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhcccccccccc
Q psy4758 155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
+.+++.++.++++||+|+|+.+ ..+..+..++...+.+.+++.. .....++.+.+... ..+...+...
T Consensus 269 ~~ii~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~ 337 (437)
T TIGR00792 269 AGLIGVLLFPRLVKKFGRKILF----------AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNF-VTGLVWALVA 337 (437)
T ss_pred HHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 9999999999999999999866 4555555555555554433322 22222333333222 2333344443
Q ss_pred ccC--------ccchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 234 DLS--------PNFAGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 234 ~~~--------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
|.. ++++|++.|+.+....+|..+++.+.|.+.+..
T Consensus 338 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 338 DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 432 234899999999999999999999999998764
No 72
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.88 E-value=6.3e-21 Score=162.44 Aligned_cols=248 Identities=15% Similarity=0.073 Sum_probs=162.3
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI 82 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (318)
|..++++|+++++..+.+.++|..+|+.+++.+.+. ..|+..+ ..+........+ .+.+.++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~---------- 186 (381)
T PRK03633 121 CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-LMSVLPW-VTGLVLAAILPL--LFTRILNQQAE---------- 186 (381)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccchHHH-HHHHHHHHHHHH--HHhcccCCCCC----------
Confidence 567888999999999999999999999999998775 4343333 323222221111 12222221100
Q ss_pred hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHH
Q psy4758 83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILV 162 (318)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
+++..+.++.+++|.++......+.....+.....++|.|+++ .|.++.+.+.+.+...++.+++++.
T Consensus 187 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~ 254 (381)
T PRK03633 187 -----------NHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWP 254 (381)
T ss_pred -----------CCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0011235567888887765554555555566677889999987 7999999999888888999999999
Q ss_pred HHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chh
Q psy4758 163 FSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAG 241 (318)
Q Consensus 163 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (318)
.|++.||+++|+.+ ..+..+..++..... .... ......+.+.+.. ...+.......+..|+ +++
T Consensus 255 ~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~--~~~~-~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~ 320 (381)
T PRK03633 255 IGRLADRFGRLLVL----------RVQVFVVILGSIAML--SQAA-MAPALFILGAAGF-TLYPVAMAWACEKVEHHELV 320 (381)
T ss_pred hHHHHHHcCcHHHH----------HHHHHHHHHHHHHHh--hhHH-HHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHH
Confidence 99999999999865 334444444333322 1111 2222233333322 2334444444454544 577
Q ss_pred hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+.+..+...++|+.++|.+.|++.|+ .++...|.+.+.+.++..+..+
T Consensus 321 ~~~~~~~~~~~lG~~igp~~~G~l~~~----~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 321 AMNQALLLSYTVGSLLGPSFTAMLMQN----YSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----hCccHHHHHHHHHHHHHHHHHH
Confidence 788888888999999999999999998 5678888887777665544443
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=9.4e-21 Score=162.72 Aligned_cols=257 Identities=11% Similarity=0.136 Sum_probs=170.1
Q ss_pred CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccCc
Q psy4758 9 ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVH 88 (318)
Q Consensus 9 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (318)
.|.+.+| .+|.+++|.+++.+... ..|+ +|++.+++.++..+ ..+.+||+|+.+++.+.+.+
T Consensus 133 ~~~r~~G------~lG~~ig~~l~g~l~~~-~~~~-~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~--------- 194 (418)
T TIGR00889 133 PPIRVMG------TIGFIAAMWAVSLLDIE-LSNI-QLYITAGSSALLGV-FALTLPDIPVAKSTAKMSIK--------- 194 (418)
T ss_pred CCeeeeh------hHHHHHHHHHHHHhccc-chhH-HHHHHHHHHHHHHH-HHhcCCCCCCCccccccCHH---------
Confidence 4555555 46888888888887433 4565 45566666665544 35567776532211100000
Q ss_pred cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccee--------echhhhchHHHHHHHHHH
Q psy4758 89 SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDI--------KSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~--------~~~~~~~~~~~~~~~~~~ 160 (318)
+..+.+.++++|+|+++.+.+..++..........+.|.++++ .|.++ ...+...+...+..+++.
T Consensus 195 -----~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~ 268 (418)
T TIGR00889 195 -----VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI 268 (418)
T ss_pred -----HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 1111234578899998888888777766666677888888877 56554 556888888888999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh---H-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL---V-GAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+..|+++||+|+|+.+ ..+.++.++....+....+.. . ..+..++.+.+.. ...+....+..+..
T Consensus 269 ~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~ 337 (418)
T TIGR00889 269 LTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFD-FFNISGSVFVEKEV 337 (418)
T ss_pred HHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHC
Confidence 9999999999999876 566666666655555433211 1 2222333333332 33344455566667
Q ss_pred ccc-hhhHHHHHH-HHHHHHHhHhhhhhheeeccCCCc--cchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 237 PNF-AGTLMGFTN-GCANIASILGPLFVGFIVTDNTSV--SQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 237 ~~~-~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
|++ |+++.|+.+ ....+|..+||.+.|++.|..++. .+|+..|.+.+++.+++.++..++.+++
T Consensus 338 p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 338 PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 766 999999997 567899999999999999985421 2689999888888777777666665543
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=1.8e-21 Score=165.04 Aligned_cols=238 Identities=12% Similarity=0.118 Sum_probs=158.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC---------CCCchHHH-HHHHHHHHHHHHHHHHHhcCCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS---------PWGWPSIF-YVSGAVAIVWAAAWCYIGANSPAQH 71 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~---------~~gWr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (318)
+|++|+++|++++++.....++|..+++.+++.+... ..+||+.| +..+++..+..++.+...+|.|+++
T Consensus 116 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
T TIGR00886 116 SFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK 195 (366)
T ss_pred HHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc
Confidence 6889999999999999988888888887777665531 15899999 4446665555555666667665432
Q ss_pred CCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758 72 PFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA 151 (318)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 151 (318)
++.+ +.+. .+... ..+ ++.....++.+++|+++...+..++.....+....+.|.|+++.+|+++.+++.+...
T Consensus 196 ~~~~--~~~~-~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 269 (366)
T TIGR00886 196 PATG--KLSF-KGARW-SVG--TGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASL 269 (366)
T ss_pred ccch--hccc-ccccc-ccc--chhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 2111 0000 00000 000 1111245678889999888888887777788889999999998889999999998888
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc---hhHHHHHHHHHHHHHhhhccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD---NLVGAITCLTLAIAINAGTYTGF 228 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
..+.++++.+++|++.||+++|+.. ..+......+..++..... ................+......
T Consensus 270 ~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 339 (366)
T TIGR00886 270 GGLLGSLARPLGGAISDRLGGARKL----------LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGST 339 (366)
T ss_pred HHHHHHHHhhccchHHHhhccchhH----------HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchh
Confidence 8999999999999999999998755 3333333333333332222 22222222223333333344555
Q ss_pred cccccccCccchhhHHHHHHHHHHHHH
Q psy4758 229 LSNHLDLSPNFAGTLMGFTNGCANIAS 255 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~g~ 255 (318)
.....+..|+++|+++|+.+..+++|+
T Consensus 340 ~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 340 FALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred hhcchhhchhhcccHHHHHHHhccCCC
Confidence 566677888889999999999888763
No 75
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=4.6e-20 Score=157.97 Aligned_cols=237 Identities=12% Similarity=0.062 Sum_probs=166.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|++++++|++++++.+.+..+|..++|.+++.+.+. .|||+.|++.++..++..++..++.||+++++++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 193 (394)
T PRK11652 122 RDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-FGWRACYLFLLLLGAGVTFSMARWMPETRPADARR------- 193 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------
Confidence 4678889999999999999999999999999999887 89999999988877776566666677754322110
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
++...++++++++|.++...+..+........+..+.|.++++.+|+++.+.++......++.+++..
T Consensus 194 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~ 261 (394)
T PRK11652 194 ------------TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAW 261 (394)
T ss_pred ------------hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01123466788888888766666666666666677788899888899999999888888888888999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
+.+++.||.+++... .........+........ ..... ........+.+. +...+.......+..|++
T Consensus 262 ~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 331 (394)
T PRK11652 262 FAGRPNKRFSTLMWQ---------SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA-GMLFPLATSGAMEPFPYL 331 (394)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccc
Confidence 999999998843311 112222222222222221 11222 222233333333 334455555566777888
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
++++.++.+...++|+.+++.+.+.+.+.
T Consensus 332 ~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 332 AGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999988665
No 76
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=150.57 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=193.9
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI 82 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (318)
+.|| |+-+..+|++.+..++|..+++.+.-.+.++..|||....+-+.++++..+.. +|...+++ ..+.
T Consensus 126 ~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W---lPq~~r~~-~~~~------ 194 (395)
T COG2807 126 RDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW---LPQALREQ-AASI------ 194 (395)
T ss_pred hhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH---hhhccccc-cccc------
Confidence 4565 67899999999999999999999999999873489999999998888764433 23321111 0000
Q ss_pred hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHH
Q psy4758 83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILV 162 (318)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
+.+..+-..++|||..|.+.+...++.+.+|+...|+|.++.| .|+|+.++|.+.+...+.++..++.
T Consensus 195 -----------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll 262 (395)
T COG2807 195 -----------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALL 262 (395)
T ss_pred -----------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHH
Confidence 2222333468999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccc-cCccchh
Q psy4758 163 FSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD-LSPNFAG 241 (318)
Q Consensus 163 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (318)
...+.+|...++.+ ......+..++...+.+.+.+..+.- .++++.+.++..+......... ..|++.+
T Consensus 263 ~P~la~R~~n~r~~---------~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa 332 (395)
T COG2807 263 IPLLARRSKNQRPL---------VVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAA 332 (395)
T ss_pred HHHHHHHhcccchH---------HHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHH
Confidence 99999997766654 24455555666666666665543222 3555555444444333333333 3344588
Q ss_pred hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.-.|+.+.++++-.+.||.+.|++.|.+ .+|...+...+.+.++..+.-+...|
T Consensus 333 ~LSgmaQg~GYllAa~GP~l~G~lhDa~---gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 333 ALSGMAQGVGYLLAAFGPWLFGFLHDAT---GSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred HHHHHhhhhhHHHHhhhhhhHhHHHHhc---CChHHHHHHHHHHHHHHHHHHhhcch
Confidence 8999999999999999999999999997 68888888777776666655554443
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.87 E-value=6.4e-21 Score=160.91 Aligned_cols=236 Identities=17% Similarity=0.099 Sum_probs=161.6
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPW-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
.|++| ++|++++++.+.+.++|..+++.+++.+.+... +||+.|.+.++..++. ...++|+.+++++. ++
T Consensus 113 ~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~---~~~~~~~~~~~~~~----~~- 183 (355)
T TIGR00896 113 KRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA---LLAWIPQVRRRVAA----NQ- 183 (355)
T ss_pred HHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH---HHHHhhhhccccCC----CC-
Confidence 46675 689999999999999999999999988876522 3999998877654432 22234443321110 00
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
+..+...++++|+|.++...+..++....++....|+|.|+++ .|+++.+.+...+...++.++++
T Consensus 184 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~ 249 (355)
T TIGR00896 184 -------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA 249 (355)
T ss_pred -------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111235577889998887777777777888888999999987 79999999999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-c
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-F 239 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (318)
++.|++.||+++|+.. ...+..+.+++...+.+.++.... ....+.+.+.+...+........+..++ +
T Consensus 250 ~~~g~l~dr~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 319 (355)
T TIGR00896 250 LLIPALARRVKDQRGI---------VAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ 319 (355)
T ss_pred HhHHHHHhhhccchHH---------HHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH
Confidence 9999999999654422 134455555555555544433322 2233344433332222222222333433 4
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
++...++.+...+++..++|.+.|++.|+.+
T Consensus 320 ~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 320 AAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999853
No 78
>PRK10133 L-fucose transporter; Provisional
Probab=99.87 E-value=1.3e-20 Score=162.73 Aligned_cols=258 Identities=12% Similarity=0.068 Sum_probs=169.1
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-------------------------CCchHHHHHHHHHH-HH
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-------------------------WGWPSIFYVSGAVA-IV 55 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-------------------------~gWr~~f~~~~~~~-~~ 55 (318)
+|+.|+++|++.+++.+....+|..+++.+++.+.... .+||++|+....+. ++
T Consensus 143 ~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~ 222 (438)
T PRK10133 143 TVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLV 222 (438)
T ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666677777899999999999999999987654100 25666675434333 33
Q ss_pred HHHHHHHHhcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhh-
Q psy4758 56 WAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYI- 134 (318)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l- 134 (318)
..++....+||.+++++ + +++. .+...++++++++|.++...+..++......+...|.+.|+
T Consensus 223 ~~~~~~~~~p~~~~~~~--~-~~~~-------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 286 (438)
T PRK10133 223 ALLIMLTKFPALQSDNH--S-DAKQ-------------GSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV 286 (438)
T ss_pred HHHHHHhcCCCCCcccc--c-cccc-------------cchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222333221100 0 0000 11123456889999988877777777778787888999885
Q ss_pred hhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHH
Q psy4758 135 NSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCL 214 (318)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (318)
++.+|+++.+++.......++.++++++++++.||+++|+.+ ..+..+..+.+.+....++.. ......
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 355 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAFAGGHV-GLIALT 355 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcCChH-HHHHHH
Confidence 566899999999999999999999999999999999999865 344444444444443333322 222333
Q ss_pred HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccc-hHHHHHHHHHHHHHHHHH
Q psy4758 215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 292 (318)
..+.+ .+...+.......+..|++.+++.++.. ...+|+.++|.+.|.+.|. .+ .+..|++..++.+..+..
T Consensus 356 l~glg-~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~----~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 356 LCSAF-MSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA----AGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHH-HHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHH
Confidence 34444 4445566666666667777788888875 4557889999999999887 44 677776655554444433
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=2e-20 Score=160.24 Aligned_cols=259 Identities=14% Similarity=0.140 Sum_probs=174.6
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV 87 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (318)
+++++.+|......++|.+++|.+++.+.+ .+||.+|++.++++++..++.+...||+|++++. ++. .+
T Consensus 129 ~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~ 197 (396)
T TIGR00882 129 RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV---ANA------LG 197 (396)
T ss_pred hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh---hcc------cc
Confidence 344567788888889999999999998865 6999999999888887765555444443321110 000 00
Q ss_pred ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh---cceeechhhhchHHHHHHHHHHHHHH
Q psy4758 88 HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL---QFDIKSNGFLSAAPYLAQWILILVFS 164 (318)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g 164 (318)
++++ +.+..+.++++|||.++...+..+.....+.....+.|.|+++.+ +.+....|...+...+...++.+..|
T Consensus 198 ~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g 275 (396)
T TIGR00882 198 ANAS--AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAP 275 (396)
T ss_pred cccC--CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 222345778899999887777766666666666677888887754 45556678888888888899999999
Q ss_pred HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH
Q psy4758 165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL 243 (318)
Q Consensus 165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (318)
++.||+++|+.+ .++.++.++........++.+......+..+.+... .......+..+..+++ ++++
T Consensus 276 ~l~~r~g~~~~l----------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~at~ 344 (396)
T TIGR00882 276 LIINRIGAKNAL----------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPF-LLVGCFKYITSQFDVRLSATI 344 (396)
T ss_pred HHHHHhccchhH----------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCcceEEEe
Confidence 999999999876 556666666665555544443333333333332211 1122223334444444 7776
Q ss_pred HHH-HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 244 MGF-TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 244 ~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+. .+....+|+.++|.+.|++.|. .+|+.+|.+.+++.+++.+...
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~----~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDS----IGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHh----cccHHHHHHHHHHHHHHHHHHH
Confidence 666 5788999999999999999998 6889999998888777666543
No 80
>KOG0569|consensus
Probab=99.86 E-value=1.3e-20 Score=159.59 Aligned_cols=284 Identities=12% Similarity=0.086 Sum_probs=194.2
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHH-HHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCC----CCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAG-LLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQ----HPFIS 75 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~-~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 75 (318)
+.|..|++.||......+.+..+|.+++..++. .+......|++.+.+..+++++. ++...++||+|+- +++.+
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk~Ll~~k~~~~ 219 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPKYLLIKKGDEE 219 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcchHHHHcCCHH
Confidence 468999999999999999999999999977664 34434378999999988888776 5667788999972 11111
Q ss_pred hhHhhh--------------hhhccCccccccccCCcchhhhhcchhH-----HHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758 76 LEERIY--------------IETSLVHSSTVSSSMKVPWKAILTSLPV-----WAVLITHLCQNWGYWTLLTEMPSYINS 136 (318)
Q Consensus 76 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~l~~ 136 (318)
+.++.. ...+..++++..+.++.++++++++|+. ..+.+....+..+.+....|...++++
T Consensus 220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~ 299 (485)
T KOG0569|consen 220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT 299 (485)
T ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence 111100 0000000111112356778899987543 333444445566677788888888888
Q ss_pred hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCc---hhH--
Q psy4758 137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGD---NLV-- 208 (318)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~---~~~-- 208 (318)
.|+++.++-+.....+....+.++++.++.||.|||+++. .+..++.+..+++.. ..+ .+.
T Consensus 300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~y 368 (485)
T KOG0569|consen 300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLL----------ISLSLMAVALLLMSIALFLSNSFGSWLSY 368 (485)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 8999999999999999999999999999999999999873 333333333322221 111 111
Q ss_pred -HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758 209 -GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF 286 (318)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 286 (318)
.....+....++..+..+...-+..|++|++ |..+.++......+..++-......+.+.. |- ..|+.+.+.+
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~----g~-~~filF~i~~ 443 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI----GP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cc-hhhHHHHHHH
Confidence 2233344445555566677777888999888 999999999999999999988888888874 22 4666666666
Q ss_pred HHHHHHHHhhccccc
Q psy4758 287 FFGNLIFLIFGTSEV 301 (318)
Q Consensus 287 ~~~~~~~~~~~~~~~ 301 (318)
++..+..+...++++
T Consensus 444 ~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHhCcccC
Confidence 666666555544444
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=4.2e-20 Score=178.33 Aligned_cols=264 Identities=14% Similarity=0.068 Sum_probs=178.9
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP 72 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (318)
++|++|+++|++++|+.+.+.++|.++|+++++++.+. ..+|++.+.+..+...+..++..+.+||.++...
T Consensus 128 i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (1146)
T PRK08633 128 IPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAP 207 (1146)
T ss_pred hHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCc
Confidence 46899999999999999999999999999999998763 1345666555554444444555556677654322
Q ss_pred CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee-chhhhchH
Q psy4758 73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK-SNGFLSAA 151 (318)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~-~~~~~~~~ 151 (318)
...+.+.. .........++.++++|.++...+..++..........++|.|+.+.+|++.. +.+++.+.
T Consensus 208 ~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~ 277 (1146)
T PRK08633 208 EVFDKKKY----------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAA 277 (1146)
T ss_pred cccccccc----------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHH
Confidence 11100000 00011123466778889888887777777777777888999999988999998 89999999
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
..++.+++.++.|++.||+++++.+ .++.++.+++.+++....+.....+..++++.+.+. ..+....+
T Consensus 278 ~~ig~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~ 346 (1146)
T PRK08633 278 SAIGIGIGSLLAGRLSGRHIELGLV----------PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL-FIVPLNAL 346 (1146)
T ss_pred HHHHHHHHHHHHHHHhCCceEccch----------hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence 9999999999999999999988766 455555555555555544333233334444444333 33444555
Q ss_pred ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHH
Q psy4758 232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFF 288 (318)
Q Consensus 232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (318)
..+..|++ ||+++|+.+.+.+++..+++.+.+.+... + .++...+++.+.+.++
T Consensus 347 ~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~-~--~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 347 IQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL-G--LSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh-c--cCHHHHHHHHHHHHHH
Confidence 55666655 99999999999999998887777665432 1 3444455554444333
No 82
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=4.7e-20 Score=160.48 Aligned_cols=264 Identities=17% Similarity=0.188 Sum_probs=191.3
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
.|..|+++...++++.+...++..++||.++|.+... .|-.++|.+.++.-++. +......+..+++++ .++|.-.
T Consensus 129 p~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~-~G~~~~f~inalsfl~~-i~~l~~~~~~~~~~~--~~~e~~~ 204 (524)
T PF05977_consen 129 PELVPKEDLPAANALNSISFNIARIIGPALGGILVAF-FGAAAAFLINALSFLIS-ILALLRWKPPPPPSS--LPRERFF 204 (524)
T ss_pred HHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHccccccccc--cchhhhh
Confidence 4678999999999999999999999999999999887 78888999887654443 333333332221111 1111100
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
+.-+..++-+.++|.+....+..++.+.....+...+|.+.++.+|.++...|++.+..+++.++|++
T Consensus 205 ------------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal 272 (524)
T PF05977_consen 205 ------------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGAL 272 (524)
T ss_pred ------------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 22234455566677776666656666666566677899999998999999999999999999999999
Q ss_pred HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h
Q psy4758 162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A 240 (318)
Q Consensus 162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (318)
+.+++.+|+++++.+ ..+.++.+++++.+.+.++.+.....+++.|.+... ......+..++..|++ |
T Consensus 273 ~~~~l~~~~~~~~lv----------~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~-~~~~~~t~~Q~~~P~~~~ 341 (524)
T PF05977_consen 273 LLPRLRRRLSSRRLV----------LLASLLFALALLLLALSPSFWLALIALFLAGAAWII-ANSSLNTLVQLSVPDWVR 341 (524)
T ss_pred HHHHhhcccCcchhh----------HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHH
Confidence 999999999888765 556667777777777766555344444444444333 3444555566666666 9
Q ss_pred hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
|++++++.+..+.+..+|..+.|.+.|. .+...++.+.++..+++.++....
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la~~----~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLADH----FGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998 677778877777666666655544
No 83
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.83 E-value=1.2e-18 Score=150.20 Aligned_cols=268 Identities=19% Similarity=0.240 Sum_probs=192.8
Q ss_pred hhHHHHHHhhHhhHHHhHHHHHHHHhCC-------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhh
Q psy4758 11 ARLFSFAFSGTQFGNLVTLPVAGLLAGS-------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIE 83 (318)
Q Consensus 11 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (318)
++..+.-.....+|.++.-.+.-.+... ..+-|..+.+.++.-++..+..++++||.|++++.....+. ..
T Consensus 187 ~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~ 264 (477)
T PF11700_consen 187 GRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LR 264 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HH
Confidence 8999999989999988888776665332 12358899999988888888889999998763221111110 00
Q ss_pred hccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHH
Q psy4758 84 TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVF 163 (318)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
... ++....++++.|+|+...+.+.++++.-+..++......|..+++|++..+...+.....+.+++|++++
T Consensus 265 ~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~ 337 (477)
T PF11700_consen 265 FGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLF 337 (477)
T ss_pred HHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 1222446677778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHhhh--cCcchHHHHHHHHHHHHHHH-HHHHHHHH-h------cCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758 164 SWLADYIVAK--QILSPTVSRKMWNTIGLWGS-AAALVGLS-F------VGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 164 g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
|++.||+|.| +.+ ..+.++. .+.+..+. + .++.+...+..+..+.+.+......-..+..
T Consensus 338 g~l~~r~g~k~~~~l----------~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~ 407 (477)
T PF11700_consen 338 GWLQDRFGPKTKRTL----------LISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSR 407 (477)
T ss_pred HHHHHHhCCchhHHH----------HHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999999 544 2222222 11211111 0 2233335555555666655544444444444
Q ss_pred ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
-.+|++.+..+|++.......+.+||.+.|.+.+.+ .+.+..+....++.+++.++......++
T Consensus 408 LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t---g~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 408 LIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT---GSQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchhHHHHHHHHHHHHHHHHhhccchh
Confidence 444455999999999999999999999999999997 3568888888888888887776655443
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=6.6e-19 Score=150.80 Aligned_cols=254 Identities=16% Similarity=0.147 Sum_probs=168.4
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-------------------------CCchHHHHHHHHHHHHHH
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-------------------------WGWPSIFYVSGAVAIVWA 57 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-------------------------~gWr~~f~~~~~~~~~~~ 57 (318)
+..|+++|++.+++.+...++|..++|.+++.+.... .+||++|++.+++.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 121 VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678889999999999999999999999998875320 259999999888777654
Q ss_pred HHHHHHhcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy4758 58 AAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV 137 (318)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 137 (318)
++.. +.++ |+.++. ++++ .....+.++++|+|+++...+..+++.....+..++++.|.++.
T Consensus 201 ~~~~-~~~~-p~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~ 262 (410)
T TIGR00885 201 LLIM-LTKM-PALNHS--DAKQ--------------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL 262 (410)
T ss_pred HHHH-HhcC-CCCCcc--cccc--------------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4432 2222 221110 0000 11112455788999999888888888888878889999999762
Q ss_pred h-cceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q psy4758 138 L-QFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTL 216 (318)
Q Consensus 138 ~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (318)
. +.+....+...+....+..+|+++++++.||+++|+.+ .+...+..+..++....++.. ....+...
T Consensus 263 ~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l----------~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~ 331 (410)
T TIGR00885 263 IPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL----------MAYAIIGMALCLGSIFAGGHV-GLYCLTLC 331 (410)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcCChH-HHHHHHHH
Confidence 2 33444445556666678899999999999999999865 555566666666665555433 33444444
Q ss_pred HHHHhhhccccccccccccCccchhh-HHHHHHHHHHHHHhHhhhhhheeeccCC--CccchHHHHHHHHHHHHH
Q psy4758 217 AIAINAGTYTGFLSNHLDLSPNFAGT-LMGFTNGCANIASILGPLFVGFIVTDNT--SVSQWQTIFLIAAAIFFF 288 (318)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g~~~~~~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~ 288 (318)
+.+... .++.......+..+++..+ +.++... -+|+++.|.+.|.+.|..+ ...+++..|++...+.+.
T Consensus 332 glf~s~-~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 332 SAFMSL-MFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHH-HHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 444444 4466666666666666433 4444333 3999999999999999521 001467777765555444
No 85
>KOG0253|consensus
Probab=99.82 E-value=1.6e-18 Score=138.41 Aligned_cols=279 Identities=14% Similarity=0.118 Sum_probs=184.3
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-ChhHhh-
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI-SLEERI- 80 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 80 (318)
|.-|..+|..-+-.. ..+.+|.+....+......+ +||||.....+.+..+. ....+++||+|+-.-.. ++.+.-
T Consensus 192 e~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-~gwr~~l~~~~~pl~~~-a~f~~w~~ESpRf~~~~G~~~kAle 268 (528)
T KOG0253|consen 192 EFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-FGWRYLLFTSSTPLMFA-ARFLVWVYESPRFYLAKGDDYKALE 268 (528)
T ss_pred HhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhHHHHH-HHHHhhcccCcchhhhcCChHHHHH
Confidence 456777888877777 89999999999999988888 99999988888555444 55677789998721100 000000
Q ss_pred ---------------------------hhhhccCcccc-ccccCCcchhhhhcc---hhHHHHHHHHHHHHHHHHHHHhh
Q psy4758 81 ---------------------------YIETSLVHSST-VSSSMKVPWKAILTS---LPVWAVLITHLCQNWGYWTLLTE 129 (318)
Q Consensus 81 ---------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 129 (318)
+.+.+..+.+. ..++.+....+++.. ++.+..+..++...+.+|+....
T Consensus 269 tL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLl 348 (528)
T KOG0253|consen 269 TLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLL 348 (528)
T ss_pred HHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 00000000000 002333444555542 45566667777777777777665
Q ss_pred hhhhhhhhh--cc-----------------eeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 130 MPSYINSVL--QF-----------------DIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 130 ~p~~l~~~~--g~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
...+.+... +. +....-.=..+..+..+.|.++.+++.||+|||+.+ ...+
T Consensus 349 ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM----------al~l 418 (528)
T KOG0253|consen 349 TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM----------ALSL 418 (528)
T ss_pred HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----------HHHH
Confidence 555554311 11 111111123455678899999999999999999987 7788
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
++.++..+++....+.. ....+.+.+-.+........+.|..|++|+. |+++.|....+.++|+.+.|.++ ...+.
T Consensus 419 ~~f~iflfll~~c~~rn-~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~- 495 (528)
T KOG0253|consen 419 ILFGIFLFLLTTCKTRN-AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL- 495 (528)
T ss_pred HHHHHHHHHHHHhcCcc-hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc-
Confidence 88888877777666555 3444555555666667888899999999999 99999999999999999999998 33333
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 270 TSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
.-..+..+.+.+++++.+...+++-+.+
T Consensus 496 ----s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 496 ----STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred ----ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 2233455666777777777776665443
No 86
>KOG1330|consensus
Probab=99.81 E-value=4.8e-20 Score=151.54 Aligned_cols=261 Identities=12% Similarity=0.060 Sum_probs=177.0
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
|+|.||..+|++++++++.+.++|..+|.+.+..+.+....|||.|+..++++++++++.+++.+|+++..+...+.+..
T Consensus 146 IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~ 225 (493)
T KOG1330|consen 146 IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK 225 (493)
T ss_pred hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc
Confidence 58999999999999999999999999999999999998556999999999999999999999998876532211111110
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh---hcceeechhhhchHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV---LQFDIKSNGFLSAAPYLAQW 157 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~~~~~~~~~~~~~~~~~~ 157 (318)
. .+.......+.+.+.|+|.+....+.+....+...++..|.|.++... .|.+..+..++..+...++.
T Consensus 226 ~--------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~ 297 (493)
T KOG1330|consen 226 M--------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGS 297 (493)
T ss_pred C--------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhch
Confidence 0 000022334555667778888788888887777777777888777543 35566677777888888999
Q ss_pred HHHHHHHHhHHHHhhhcCcc-hHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhcccccccccccc
Q psy4758 158 ILILVFSWLADYIVAKQILS-PTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDL 235 (318)
Q Consensus 158 ~~~~~~g~l~dr~g~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (318)
+|.+++|.++||+.++..-. ...+.......+..+.+..+.+......... ..+.++.++.......+....-...++
T Consensus 298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v 377 (493)
T KOG1330|consen 298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV 377 (493)
T ss_pred hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence 99999999999976632110 0011122233344444444444444443333 444555555555555555544444454
Q ss_pred -CccchhhHHHHHHHHHHHHH-hHhhhhhheeeccC
Q psy4758 236 -SPNFAGTLMGFTNGCANIAS-ILGPLFVGFIVTDN 269 (318)
Q Consensus 236 -~~~~~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~ 269 (318)
+|++|.+++++...+..+.+ +-+|++.|.+.|+.
T Consensus 378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 45559999999977766554 55666999998874
No 87
>KOG3764|consensus
Probab=99.81 E-value=1.7e-19 Score=145.38 Aligned_cols=264 Identities=16% Similarity=0.100 Sum_probs=195.1
Q ss_pred CccCCCC-CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 2 SKWAPPM-ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 2 ~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
+|.||++ ||++++|+...+.++|-.+||++|+.+.+. .|.+.+|.+.++++++...+.++.++.+..+++.
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~------- 256 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS------- 256 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHHHHHHHHHHHHHHHHheeCccccCccc-------
Confidence 5677765 589999999999999999999999999999 9999999999999999878777766443322210
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
..+..++++++++|.++.........+.+.......++.+..+.+..+.-+.|..+....+...+++
T Consensus 257 -------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~ 323 (464)
T KOG3764|consen 257 -------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGT 323 (464)
T ss_pred -------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccC
Confidence 3344678899999999999888888888888888888998888777455589999999999999999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhh---hccccccccccccCc
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINA---GTYTGFLSNHLDLSP 237 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 237 (318)
.+.|.+.||++.-+.+ ....+++..+++....++.++...+.+....++.+... ...+...........
T Consensus 324 ~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~ 395 (464)
T KOG3764|consen 324 NLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHV 395 (464)
T ss_pred chHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhc
Confidence 9999999999944322 12455555555555555555443333333333222222 222333333322222
Q ss_pred c---chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 238 N---FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 238 ~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+ -.|..+++......+|.++||.++|.+.+. .++.+...+.++..++-..++..++.
T Consensus 396 s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~----iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 396 SGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA----IGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred cccceeeeHHHHHHHHHHHhhhccccccchheee----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 278999999999999999999999999999 78888888888777776666555543
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=2.9e-17 Score=142.92 Aligned_cols=288 Identities=14% Similarity=0.112 Sum_probs=185.7
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCCChhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH-PFISLEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 79 (318)
++|..|.|.|....++.....-+....++.++..+..+ .+|||.|++.++...+..++.+++...+++++ +..+...+
T Consensus 155 isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~ 233 (599)
T PF06609_consen 155 ISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKR 233 (599)
T ss_pred HHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHH
Confidence 46889999998888877776666666788888877776 79999999998887776555444433222211 11111111
Q ss_pred hhhhhccC-------------------------cc-----------------------ccc-cccCCcchhhhhcc-hhH
Q psy4758 80 IYIETSLV-------------------------HS-----------------------STV-SSSMKVPWKAILTS-LPV 109 (318)
Q Consensus 80 ~~~~~~~~-------------------------~~-----------------------~~~-~~~~~~~~~~~~~~-~~~ 109 (318)
+.. .+.+ .+ +.. ..+++.-..+++|+ |.+
T Consensus 234 ~~l-~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~ 312 (599)
T PF06609_consen 234 EQL-KELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGF 312 (599)
T ss_pred HHH-HHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHH
Confidence 110 0000 00 111 11233345578887 556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee---chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK---SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
....+..+...+.++....+.|......++-++. +.++...+.+++..++..+.|.+..++++-|.. +
T Consensus 313 ~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~---------l 383 (599)
T PF06609_consen 313 AALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ---------L 383 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH---------H
Confidence 6667777788888888888889888877766653 567888888899999999999999888765533 3
Q ss_pred HHHHHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 187 TIGLWGSAAALVGLSFVG--DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
+.+.++..+++.++.... +........++.+.+.+....+.........++++-|++.|+..+++.+|+.+|..+...
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 445555554444443332 222234444455555555444444444444455559999999999999999999988866
Q ss_pred eeccC----------------------------------------------------------CCccchHHHHHHHHHHH
Q psy4758 265 IVTDN----------------------------------------------------------TSVSQWQTIFLIAAAIF 286 (318)
Q Consensus 265 l~~~~----------------------------------------------------------~~~~~~~~~~~~~~~~~ 286 (318)
+.... ....+|+.+|+....+.
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG 543 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFG 543 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55321 11136788899888888
Q ss_pred HHHHHHHHhhccc
Q psy4758 287 FFGNLIFLIFGTS 299 (318)
Q Consensus 287 ~~~~~~~~~~~~~ 299 (318)
.++++..++++..
T Consensus 544 ~vaiiaa~fl~d~ 556 (599)
T PF06609_consen 544 VVAIIAALFLGDI 556 (599)
T ss_pred HHHHHHHHHcCCh
Confidence 8888888877543
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.77 E-value=3e-17 Score=147.18 Aligned_cols=172 Identities=15% Similarity=0.183 Sum_probs=125.5
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC--C-------------------CchHHHHHHHHHHHHHHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP--W-------------------GWPSIFYVSGAVAIVWAAA 59 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~--~-------------------gWr~~f~~~~~~~~~~~~~ 59 (318)
+.|++|+++|++++++++.+..+|.++|+++++++.+.. + +||..|++.+++.++.++.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999987531 1 2778899988888887655
Q ss_pred HHHHhcCC-CCCCCCCC--hhHhhhhhhccCcccc----ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy4758 60 WCYIGANS-PAQHPFIS--LEERIYIETSLVHSST----VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPS 132 (318)
Q Consensus 60 ~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 132 (318)
.+ ++|++ |++.++.+ ..+++...+..++... ..++....++++++||.++...+..++....++++..|+|.
T Consensus 277 l~-~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 277 FF-FFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HH-hCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 45543 33211111 0110000000000000 00111235678999999999999999999999999999999
Q ss_pred hhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhh
Q psy4758 133 YINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAK 173 (318)
Q Consensus 133 ~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 173 (318)
|+++++|+++.+++.+.....+ +.+++.+++|+++||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 5789999999999999844
No 90
>KOG4686|consensus
Probab=99.76 E-value=5.5e-17 Score=125.30 Aligned_cols=276 Identities=14% Similarity=0.151 Sum_probs=168.9
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC---CCC--chHHH---HHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS---PWG--WPSIF---YVSGAVAIVWAAAWCYIGANSPAQHPFI 74 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~---~~g--Wr~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (318)
-||..||.+.++|+..+..-+|...--.+.+++.+. -++ =+... ...+...+...+.....+ ...
T Consensus 163 ~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l-------g~~ 235 (459)
T KOG4686|consen 163 YWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL-------GLS 235 (459)
T ss_pred EEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh-------hhh
Confidence 588999999999999999999988776666666653 010 01111 111111111111111110 000
Q ss_pred ChhHhhhhhhccCccccccccCCcchhhhhc-chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758 75 SLEERIYIETSLVHSSTVSSSMKVPWKAILT-SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY 153 (318)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~ 153 (318)
++..++....+... ..+.....+... .|.+|.+.++..++....+.+....|.++++.+|+|+..++.+.+...
T Consensus 236 D~rAerilh~e~g~-----~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy 310 (459)
T KOG4686|consen 236 DDRAERILHLEEGF-----LGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVY 310 (459)
T ss_pred hhHHHHHHhhhcCc-----ccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhh
Confidence 01000000000000 000011112211 378999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758 154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233 (318)
Q Consensus 154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
..+.+.+++.|.++||.|++... ...+++....+-..+.+..-+++ ....+++......... .+....
T Consensus 311 ~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy--~~m~~lGLsysllAcs-lWP~va 378 (459)
T KOG4686|consen 311 GISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPY--TSMTFLGLSYSLLACS-LWPCVA 378 (459)
T ss_pred hhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHH--HHHHHHhhhHHHHHHH-Hhhhhh
Confidence 99999999999999999998754 23444555555555555443332 2223333333222222 222333
Q ss_pred ccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758 234 DLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302 (318)
Q Consensus 234 ~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (318)
.+.|++ -|++.|.++.++|+|-++.|.+.|.+.|..++......-|...+.+.+.+..+.+...++++.
T Consensus 379 ~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~g 448 (459)
T KOG4686|consen 379 SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSG 448 (459)
T ss_pred hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccC
Confidence 445555 999999999999999999999999999996553333444445555555555555555544433
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.76 E-value=5.6e-17 Score=131.65 Aligned_cols=245 Identities=12% Similarity=0.068 Sum_probs=173.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------------------CCCchHHHHHHHHHHHHHHHHHHHH
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------------------PWGWPSIFYVSGAVAIVWAAAWCYI 63 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------------------~~gWr~~f~~~~~~~~~~~~~~~~~ 63 (318)
+...|+++-.+.+++.+...++|.+++|++++.+..+ ...||++|...+...+++.+....
T Consensus 130 ~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~- 208 (422)
T COG0738 130 TLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL- 208 (422)
T ss_pred HHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh-
Confidence 3456777789999999999999999999999988762 135888998887776665443322
Q ss_pred hcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758 64 GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK 143 (318)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 143 (318)
.+.|+.++.. +++. +.+.....+++|+|.++...+..+++........+|++.|+.+..|.+..
T Consensus 209 -~k~p~~~~~~-~~~~--------------~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~ 272 (422)
T COG0738 209 -SKLPDLQVAA-PSLG--------------ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ 272 (422)
T ss_pred -ccCCcCCccc-cccc--------------ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH
Confidence 2222221111 1110 11112567899999999999999999999999999999999998899999
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG 223 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (318)
++....+....+.++|++++.++..|+...|.+ ........+.++.....++.. .......++.+ .+.
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L----------af~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F-~si 340 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL----------AFYALIAILLLLAVALIGGVV-ALYALFLIGLF-NSI 340 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHH-hHH
Confidence 999999999999999999999999999999866 444444444444444454432 33334444444 445
Q ss_pred ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHH
Q psy4758 224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFL 280 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 280 (318)
.+|...+...+..|++...+.+ .-.+.-+|+++-|.+.|++.|. .+....+.
T Consensus 341 mfPTIfslal~~l~~~ts~~s~-~l~maivGGAiiP~l~G~i~d~----~g~~~~~~ 392 (422)
T COG0738 341 MFPTIFSLALKNLGEHTSVGSG-LLVMAIVGGAIIPPLQGVIADM----FGIQLTFL 392 (422)
T ss_pred HHHHHHHHHHhccCccccccce-eeeeheecchHHHHHHHHHHHh----hhhHHHHH
Confidence 5666666666666654444333 4566788999999999999999 44444444
No 92
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.75 E-value=3.3e-16 Score=135.44 Aligned_cols=240 Identities=18% Similarity=0.202 Sum_probs=176.4
Q ss_pred CccCC-CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC----C-C-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758 2 SKWAP-PMERARLFSFAFSGTQFGNLVTLPVAGLLAGS----P-W-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI 74 (318)
Q Consensus 2 ~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~----~-~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (318)
.|..+ ++||.+..+..+.+..+|.++...+.+.+.+. + . +|++..++.+++.++..++..+..||.+++.+
T Consensus 129 ~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~-- 206 (428)
T PF13347_consen 129 PELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVT-- 206 (428)
T ss_pred ccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccc--
Confidence 56666 47899999999999999987776666665532 1 1 79999999999999888888888777221111
Q ss_pred ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758 75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL 154 (318)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~ 154 (318)
+++++ .+.+..++++++||.++.+.+..++...+........+.|.++..|.+ ...+.......+
T Consensus 207 -~~~~~-------------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~ 271 (428)
T PF13347_consen 207 -EQEKK-------------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFV 271 (428)
T ss_pred -ccccc-------------cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHH
Confidence 01100 334456788999999999999999988888888888888888877776 556677778889
Q ss_pred HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-chhH-HHHHHHHHHHHHhhhccccccccc
Q psy4758 155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DNLV-GAITCLTLAIAINAGTYTGFLSNH 232 (318)
Q Consensus 155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
+.+++.++.++++||+|+|+.+ ..+..+.+++.+.+.+.+ ++.. ..+...+.+.+. +.......+..
T Consensus 272 ~~~v~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~-~~~~~~~~a~~ 340 (428)
T PF13347_consen 272 ASIVGSPLWGRLSKRFGKKKVY----------IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGY-GAFFVIPWAML 340 (428)
T ss_pred HHHHHHHHHHHHHHHccceeeh----------hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhh-ccccccccccc
Confidence 9999999999999999999987 667777777766666665 3333 333444444443 33445555555
Q ss_pred cccCc--------cchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 233 LDLSP--------NFAGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 233 ~~~~~--------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
.|+.+ ++.|...|+.+....++..+++.+.+.+.+..
T Consensus 341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 55544 22689999999999999999999999887663
No 93
>KOG2563|consensus
Probab=99.74 E-value=9.2e-17 Score=132.01 Aligned_cols=276 Identities=17% Similarity=0.131 Sum_probs=191.1
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-----CCchH--HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-----WGWPS--IFYVSGAVAIVWAAAWCYIGANSPAQHPFIS 75 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-----~gWr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (318)
-|||++||+.+..+-.++..+|.+++.++...+..+. ..|.. .|+..+.++.+..++..+..++.|+.++...
T Consensus 167 ~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s 246 (480)
T KOG2563|consen 167 VWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSAS 246 (480)
T ss_pred hhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchh
Confidence 5999999999999999999999999999998887642 35655 3555555555554555556666555433222
Q ss_pred hhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHH
Q psy4758 76 LEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLA 155 (318)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~ 155 (318)
.....+ .+-..+.++.++|+++....+.+......+++..+.+-.-+.. .|++...+|+......++
T Consensus 247 ~~~~~~------------~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~ 313 (480)
T KOG2563|consen 247 QAALQD------------ASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVA 313 (480)
T ss_pred Hhhhhc------------CcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHH
Confidence 111110 2344567889999999999999999888888888877766665 688889999999999999
Q ss_pred HHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH-HHHHHhc--CchhH-HHHHHHHHHHHHhhhcccccccc
Q psy4758 156 QWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA-LVGLSFV--GDNLV-GAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 156 ~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
+++++.+.|.+.||.+.-+... .+......++ +.+.... ..... ....+..++.+..+..+...-.-
T Consensus 314 Gmlga~~~gii~Dktk~fk~~~---------~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~Elg 384 (480)
T KOG2563|consen 314 GMLGALASGIIADKTKKFKLTT---------LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELG 384 (480)
T ss_pred HHHHHHHHHhhhhhhhhHHHHH---------HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeee
Confidence 9999999999999998766431 2223333333 2222211 12222 44445555565555555555566
Q ss_pred ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
.+..+|..-++..|+.+..+++.+.+-..+.+...+..+...++....+......++++++..++++..
T Consensus 385 vE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 385 VETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred eeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 677789999999999999999999999999999888744322344455555666666666666665443
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.72 E-value=1.2e-15 Score=129.36 Aligned_cols=264 Identities=15% Similarity=0.174 Sum_probs=174.3
Q ss_pred CchhHHHHHHhhHhhHHHhHHHH-HHHHhCC-C-CCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhc
Q psy4758 9 ERARLFSFAFSGTQFGNLVTLPV-AGLLAGS-P-WGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETS 85 (318)
Q Consensus 9 ~r~~~~~~~~~~~~~G~~~~~~~-~~~l~~~-~-~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (318)
++++-.|-.-...++|.+++... +..+... + .+..+.+++.+..+++. ....+.+|+.|++++..++.+
T Consensus 122 ~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll-~~~~l~lp~~~~~~~~~~~~~------- 193 (400)
T PF03825_consen 122 DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLL-AGFALFLPKTPPKRSAKESVK------- 193 (400)
T ss_pred cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHH-HHHHHhCCCCccccccCCCcc-------
Confidence 44555566666667777666443 2223222 0 12334566666555443 233445677663222111100
Q ss_pred cCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHH
Q psy4758 86 LVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSW 165 (318)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 165 (318)
+....+..+++|+|+++.+.+..++...+......+.+.|+++.-|.+....+.+.+...++.++.-...++
T Consensus 194 --------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~ 265 (400)
T PF03825_consen 194 --------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGR 265 (400)
T ss_pred --------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223457899999999999999999999999999999999943377788888888888889999999999
Q ss_pred hHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHH-HHHHH----HHHHHHhhhccccccccccccCccc-
Q psy4758 166 LADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCL----TLAIAINAGTYTGFLSNHLDLSPNF- 239 (318)
Q Consensus 166 l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (318)
+..|+|.++.+ .++.+..++=..++....++.+. ..... .-+.. .+........+..+..|++
T Consensus 266 ~~~r~g~~~ll----------~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~t-f~~~~~a~~~yi~~~~p~~~ 334 (400)
T PF03825_consen 266 FLKRFGIKWLL----------LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLT-FGLFHAASVRYIDRIAPPEL 334 (400)
T ss_pred HHHhcCHHHHH----------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHhCCccc
Confidence 99999999876 77888888888888777444332 22222 23333 3334455556666777776
Q ss_pred hhhHHHHHHHH-HHHHHhHhhhhhheeeccCCCc--cchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 240 AGTLMGFTNGC-ANIASILGPLFVGFIVTDNTSV--SQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 240 ~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
|+++.++++.. ..+|..+|..++|+++|+.+.. ..|...+.+.+++.++..++.....|+
T Consensus 335 ~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 335 RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999998776 5699999999999999985433 345556666666666666666555443
No 95
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.71 E-value=1.4e-15 Score=132.85 Aligned_cols=293 Identities=12% Similarity=0.128 Sum_probs=158.9
Q ss_pred CCccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC----CCC
Q psy4758 1 MSKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH----PFI 74 (318)
Q Consensus 1 i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 74 (318)
++|++|++ +|+++++++..+.++|..+||.+++++.++ .|||+.|++.++ +++..++.+...++..++. ++.
T Consensus 130 i~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (489)
T PRK10207 130 LSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHK 207 (489)
T ss_pred HHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCcc
Confidence 35788877 458899999999999999999999999998 899999999654 4444444444444322111 010
Q ss_pred ChhHhhhhh------------hccCccccccc---------------cCCcchhhhhcchhHHHHHHH--HHHHHHHHHH
Q psy4758 75 SLEERIYIE------------TSLVHSSTVSS---------------SMKVPWKAILTSLPVWAVLIT--HLCQNWGYWT 125 (318)
Q Consensus 75 ~~~~~~~~~------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 125 (318)
+.+...... ....+...... .......+++|+|.+....+. .......+..
T Consensus 208 ~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q 287 (489)
T PRK10207 208 PMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQ 287 (489)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001000000 00000000000 000001145666665543322 3334444555
Q ss_pred HHhhhhhhhhhhhccee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH-
Q psy4758 126 LLTEMPSYINSVLQFDI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL- 200 (318)
Q Consensus 126 ~~~~~p~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~- 200 (318)
..+.++.+.++..+.+. .....+.+...+..++.+++.+++.||+++|+.-... ..| ..+++++.+++++.+
T Consensus 288 ~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~-~~k--~~~G~~l~~~~~~~~~ 364 (489)
T PRK10207 288 MPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSM-PMK--FTLGMFLCSLGFLTAA 364 (489)
T ss_pred cccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCc-HHH--HHHHHHHHHHHHHHHH
Confidence 55677777764222211 1122333344566667888899999999988630000 000 144555555554322
Q ss_pred ----HhcC-----chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccC--
Q psy4758 201 ----SFVG-----DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDN-- 269 (318)
Q Consensus 201 ----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-- 269 (318)
.... +.++.....++.+.+.....++.........+++.+|.++|+.+...++|+.++..+........
T Consensus 365 ~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~ 444 (489)
T PRK10207 365 AAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNI 444 (489)
T ss_pred HHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 1111 11223334445555544444444444444444444999999999999999999988876542110
Q ss_pred ----CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 270 ----TSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 270 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.....+...|...++..+++.++.+...+
T Consensus 445 ~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 445 TDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00123667777777776666666555443
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=99.71 E-value=2.1e-16 Score=137.40 Aligned_cols=239 Identities=15% Similarity=0.058 Sum_probs=146.3
Q ss_pred CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758 2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI 74 (318)
Q Consensus 2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (318)
+|+. +++||++..++...+..+|..+++.+...+.. ...+|+..+.+.++++++..+..++..+|.+++++
T Consensus 135 ~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-- 212 (444)
T PRK09669 135 GAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV-- 212 (444)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--
Confidence 3555 45789999898888888887777665443321 12589999988888887766666665565432211
Q ss_pred ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758 75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL 154 (318)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~ 154 (318)
+++ .+...++++++|||.++.+.+..++............+.|.+...+. +...+.+.....+
T Consensus 213 --~~~--------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i 275 (444)
T PRK09669 213 --DNS--------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMI 275 (444)
T ss_pred --cCC--------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHH
Confidence 000 11234567889999998887777766666655445444444443332 2333344455567
Q ss_pred HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCchhH-HHHHHHHHHHHHhhhccccccccc
Q psy4758 155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNH 232 (318)
Q Consensus 155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
..+++.++++++.||+|+|+.+ ..+.++..+... .....+++.. ..+..++.+.+.. ...+...+..
T Consensus 276 ~~ii~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~am~ 344 (444)
T PRK09669 276 AGLFGALLSERLLGKFDRVRAF----------KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQN-LTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 7888889999999999999865 333333332222 2222223332 2333333344333 3334444455
Q ss_pred cccCc-------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 233 LDLSP-------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 233 ~~~~~-------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
.|..+ ++ .|...|..+....+|.++++.+.|.+.+..+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45432 22 5778899999999999999999999887643
No 97
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.71 E-value=5.3e-16 Score=126.90 Aligned_cols=274 Identities=15% Similarity=0.108 Sum_probs=197.0
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHH--HHHhC---------------CCCCchHHHHHHHHHHHHHHHHHHHHh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVA--GLLAG---------------SPWGWPSIFYVSGAVAIVWAAAWCYIG 64 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~~---------------~~~gWr~~f~~~~~~~~~~~~~~~~~~ 64 (318)
.|..++++-++..++-.....+|+.+.-.+. ..... ....=|..+.+.++.-++..+..++..
T Consensus 141 ~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v 220 (438)
T COG2270 141 PRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNV 220 (438)
T ss_pred hhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcc
Confidence 3567777778888777777777776655443 11111 113568888888888888878888887
Q ss_pred cCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec
Q psy4758 65 ANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS 144 (318)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~ 144 (318)
||.++...+..+.-.... ++-...++++.+++++..+.+..+++.-+.+++......|-.+.+|++..+
T Consensus 221 ~~~~~~~~~~~~~l~~g~-----------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~ 289 (438)
T COG2270 221 HDAEKISSPPPTALRNGF-----------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE 289 (438)
T ss_pred cccccccccchHHHHHHH-----------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH
Confidence 776643211111100000 223356778888899999999999999999999999999999889999999
Q ss_pred hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhc
Q psy4758 145 NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGT 224 (318)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (318)
.........+.+++|+++.|++.||+|.|+++ ..++++..+..+...+...........++++.+.+...
T Consensus 290 lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 290 LLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 99999999999999999999999999999877 45555555544444444443334455566666655544
Q ss_pred cccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 225 YTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
...-......++|++.++.+|+++..++..+.+||.+.+.+.+.++ +-+..+....++..++.++....+.+
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg---~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG---SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc---chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 4444444444555569999999999999999999999999999875 34777777777777777666555443
No 98
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.70 E-value=1.8e-15 Score=126.24 Aligned_cols=263 Identities=16% Similarity=0.141 Sum_probs=178.8
Q ss_pred hhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccCccc
Q psy4758 11 ARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSS 90 (318)
Q Consensus 11 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (318)
+.-.|-.-+..++|.+++..++|.+.+ .+=+..||+....+++..++.....|+.+++.+..+.++.+
T Consensus 137 ~feYG~~R~wGSig~ai~s~~~G~L~~--i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~---------- 204 (412)
T PF01306_consen 137 GFEYGRARMWGSIGFAIASLLAGILFN--INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK---------- 204 (412)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------
T ss_pred cCCcchHHHHhhHHHHHHHHHhheeee--eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC----------
Confidence 444566778889999999999999876 34577888877666665455444444433322111111000
Q ss_pred cccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh---hcceeechhhhchHHHHHHHHHHHHHHHhH
Q psy4758 91 TVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV---LQFDIKSNGFLSAAPYLAQWILILVFSWLA 167 (318)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 167 (318)
+++.+..+..+++|+|++|.+.+........+..+....|.|+.+. .+.+....|++.+...+..++.-.+..++.
T Consensus 205 -~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li 283 (412)
T PF01306_consen 205 -KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLI 283 (412)
T ss_dssp ------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 0011123456789999999998888887778888877777777642 345566788888888899999999999999
Q ss_pred HHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHH
Q psy4758 168 DYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGF 246 (318)
Q Consensus 168 dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~ 246 (318)
+|+|.|+.+ .++..+..+=.....+.++.+.....-.+-+.-+.. ......-+..+.+|++ .++...+
T Consensus 284 ~rig~k~~L----------llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l-~lva~fkYI~~~fd~rlsAt~y~v 352 (412)
T PF01306_consen 284 NRIGAKNLL----------LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPL-LLVAAFKYITAHFDKRLSATLYLV 352 (412)
T ss_dssp HHH-HHHHH----------HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHS-GGGHHHHHHH
T ss_pred HhcChHhHH----------HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHhHHHHHHHH
Confidence 999999977 677777888888888887766444444444444433 3344445556667776 7888888
Q ss_pred H-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 247 T-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 247 ~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
. +...+++..+.+.+.|.++|+ .|++.+|++.+.+.+...++..+..++++
T Consensus 353 ~~~~~~~~~~~i~s~~~G~lyd~----~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 353 GFQFAKQIGIIILSPLAGYLYDR----IGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHHHHhhhHHhhHhh----cCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 5 678889999999999999999 88999998888887776666665554433
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.70 E-value=2.4e-16 Score=137.85 Aligned_cols=243 Identities=14% Similarity=0.031 Sum_probs=148.9
Q ss_pred CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHh----C--CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758 2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLA----G--SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI 74 (318)
Q Consensus 2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~----~--~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (318)
+|.. +++||.+..++...+.++|..+.+.+...+. . ...+|+....+.+++.++..+..++..||.+++....
T Consensus 132 ~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~ 211 (473)
T PRK10429 132 PTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV 211 (473)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc
Confidence 4555 5789999999977777777666655544331 1 1136888877777777766566666566653221100
Q ss_pred ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758 75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL 154 (318)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~ 154 (318)
.++++ + .+.+..++.+++||.++.+.+..++..........+.+.|.+...+ ++...+.+.....+
T Consensus 212 ~~~~~-----------~--~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i 277 (473)
T PRK10429 212 SAEGS-----------H--LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGA 277 (473)
T ss_pred ccccc-----------C--CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHH
Confidence 00000 0 1222345567789999888888888877777777777766665433 44556666666678
Q ss_pred HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH---hc-CchhH-HHHHHHHHHHHHhhhcccccc
Q psy4758 155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS---FV-GDNLV-GAITCLTLAIAINAGTYTGFL 229 (318)
Q Consensus 155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 229 (318)
+.+++.++.+++.||+|+|+.+ ..+..+..++.+.+. .. ++... ..+..++.+.+... ......
T Consensus 278 ~~ii~~~~~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~-~~~~~~ 346 (473)
T PRK10429 278 ANLVTLILFPRLVKSLSRRILW----------AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTAL-FWVLQV 346 (473)
T ss_pred HHHHHHHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 8899999999999999999876 334433333332222 12 22222 22222333333322 233334
Q ss_pred ccccccCc-------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 230 SNHLDLSP-------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 230 ~~~~~~~~-------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
+...|..+ ++ .|..+|..+....++..+++.+.|.+.+..
T Consensus 347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44444432 22 566899999999999999999999988753
No 100
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.70 E-value=8.3e-21 Score=165.45 Aligned_cols=282 Identities=16% Similarity=0.182 Sum_probs=171.0
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH---PFIS 75 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 75 (318)
+.|..|+++|++..++.+.+..+|.+++..++..+.+. +.+||..+.+.++++++. .+...++||+|+-- ++.+
T Consensus 127 ~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~wL~~~~~~~ 205 (451)
T PF00083_consen 127 ISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPRWLLSKGRDE 205 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccceeccccccc
Confidence 46899999999999999999999999998887666443 135999999999888765 44557889999731 1111
Q ss_pred hhHhhhhh--------hccCccc---cccccCCcchhhhhcchh----HHHHHHHHHHH-HHHHHHHHhhhhhhhhhhhc
Q psy4758 76 LEERIYIE--------TSLVHSS---TVSSSMKVPWKAILTSLP----VWAVLITHLCQ-NWGYWTLLTEMPSYINSVLQ 139 (318)
Q Consensus 76 ~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g 139 (318)
+.++...+ ++.+++. ++.++.+..++++++++. ........... ..+.+....+.|.++++ .+
T Consensus 206 ~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~ 284 (451)
T PF00083_consen 206 EAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AG 284 (451)
T ss_pred ccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-cc
Confidence 11111000 0000000 000111245677777643 22222223223 33444555666666665 67
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH----hcCch----hHHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS----FVGDN----LVGAI 211 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~ 211 (318)
.+.. -.......+...++.+++..+.||+|||+.+ ..+..+..++...+. ...+. ....+
T Consensus 285 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 352 (451)
T PF00083_consen 285 ISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWWSILSI 352 (451)
T ss_pred cccc--ccccccccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccccc
Confidence 7666 2233344566777778888999999999877 444444444443332 11222 11122
Q ss_pred H-HHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHH
Q psy4758 212 T-CLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFG 289 (318)
Q Consensus 212 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 289 (318)
. .......+.....+....+..|.+|++ |+++.|+....++++++++|.+...+.+.. +....+.+.++++++.
T Consensus 353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----GGWGVFLIFAGVCLIA 428 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccchhhHHHHHHH
Confidence 2 222223333344566667788999998 999999999999999999999999888773 3233555555555555
Q ss_pred HHHHHhhcccc
Q psy4758 290 NLIFLIFGTSE 300 (318)
Q Consensus 290 ~~~~~~~~~~~ 300 (318)
.+......+++
T Consensus 429 ~i~~~~~lpET 439 (451)
T PF00083_consen 429 IIFVYFFLPET 439 (451)
T ss_pred HhheeEEEeeC
Confidence 55554444433
No 101
>PRK09848 glucuronide transporter; Provisional
Probab=99.69 E-value=3.1e-16 Score=136.48 Aligned_cols=234 Identities=12% Similarity=0.050 Sum_probs=142.5
Q ss_pred CCCCchhHHHHHHhhHh-----hHHHhHHHHHHHHhCC-CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758 6 PPMERARLFSFAFSGTQ-----FGNLVTLPVAGLLAGS-PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER 79 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~-----~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (318)
++++|.+..+....+.+ ++..++|.++...... ..+|.....+.++++++..++.....||+++++.+ +
T Consensus 140 ~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-----~ 214 (448)
T PRK09848 140 QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-----Q 214 (448)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-----C
Confidence 45678888777665433 4455556555543211 01222222233333333333333344554321110 0
Q ss_pred hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
...+..+++++|||.++...+..++............|.|+++.+|.++...++......++.+++
T Consensus 215 --------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 280 (448)
T PRK09848 215 --------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVAS 280 (448)
T ss_pred --------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHH
Confidence 111234678999999999988888888888888888898998888887665555555446678889
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh-H-HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL-V-GAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
.++.+++.||+++|+.+ ..+.++..++.+.+.+.+... + .....++.+.+..... +...+...+..+
T Consensus 281 ~~l~~~l~~r~g~~~~~----------~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~ 349 (448)
T PRK09848 281 APLVPGMVARIGKKNTF----------LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM-TVMWALEADTVE 349 (448)
T ss_pred HHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhh
Confidence 99999999999999876 556666666555555443222 2 2222333344433333 333333334333
Q ss_pred c--------chhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 238 N--------FAGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 238 ~--------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
. ++|...|+.+....+|..+++.+.+.+.+..
T Consensus 350 ~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 350 YGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred hhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 2699999999999999999999998887653
No 102
>PRK10054 putative transporter; Provisional
Probab=99.69 E-value=3.8e-16 Score=133.53 Aligned_cols=173 Identities=17% Similarity=0.160 Sum_probs=130.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
|.++.+.+..++...+......++|.|+++++|+++.+.|+..+...++.+++.++.|+++||+|+|+.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~---------- 76 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM---------- 76 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH----------
Confidence 4567777888888888889999999999888999999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+.++..++.+.+.+.++...........+.+. ....+.......|..|+ +|+++.|+.+...++|..++|.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 77 LLAITAFASGFIAIPLVNNVTLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666666666555432222222333222 23334445555555555 499999999999999999999999988
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+ .+|+..|...+++.+++.+....
T Consensus 156 ~~-----~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 156 VM-----QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HH-----hccCcHHHHHHHHHHHHHHHHHH
Confidence 64 36888888887777766554443
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.69 E-value=5.5e-16 Score=133.62 Aligned_cols=175 Identities=15% Similarity=0.170 Sum_probs=131.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-hhhcCcchHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-VAKQILSPTVSRKM 184 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~r~~ 184 (318)
.+.++......+...++++++..++|.|+++.+|+++.+++...........++.+++|+++||+ |||+.+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i-------- 79 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV-------- 79 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH--------
Confidence 35567777778888899999999999999988999999999999999999999999999999999 999876
Q ss_pred HHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCcc---chhhHHHHHHHHHHHHHhHhhh
Q psy4758 185 WNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN---FAGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~ 260 (318)
.++.++..++..++...++... .......+..+ .+...+...++..|.+|+ +|.++.++.+...++|+.++|.
T Consensus 80 --liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG-~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 80 --MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG-YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred --HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh-cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 5666666666555543322111 22222222222 223334445566777765 3999999999999999999999
Q ss_pred hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
+.+++.+. .+|+..|...++.++++.+....
T Consensus 157 l~g~L~~~----~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 157 ACGYAQEE----YSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHHhh----hChHHHHHHHHHHHHHHHHHHHH
Confidence 99999887 78999998877766666555544
No 104
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.2e-15 Score=126.97 Aligned_cols=241 Identities=17% Similarity=0.107 Sum_probs=176.2
Q ss_pred CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC----C--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758 6 PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG----S--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER 79 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (318)
+++||.+..+..+.+.++|..+...+...+.. . ..||+..-.+.++++++..+.+++..+|++.+....++..+
T Consensus 143 d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~ 222 (467)
T COG2211 143 DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK 222 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc
Confidence 46899999999999999997776655544432 2 35899999999999998888888888887653322111010
Q ss_pred hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
.+.+..+..+++||++...++..++...+.+...+....|.+...|.+.............+.+++
T Consensus 223 --------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~ 288 (467)
T COG2211 223 --------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIG 288 (467)
T ss_pred --------------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence 222233456889999999999888888888888899999998888888888888878778888888
Q ss_pred HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCc-
Q psy4758 160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSP- 237 (318)
Q Consensus 160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (318)
.++..++.+|+|+|+.+ .++.++..++...+.+.+.+.. +.++..++.....+...+...+...|...
T Consensus 289 ~~~~p~L~~~~gkk~~~----------~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDy 358 (467)
T COG2211 289 LILWPRLVKKFGKKKLF----------LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDY 358 (467)
T ss_pred HHhHHHHHHHhchHHHH----------HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhH
Confidence 99999999999999987 6777777777777777764433 33333233333334444444444444322
Q ss_pred ------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 238 ------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 238 ------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
.+ .|...|...++.-+|.+++..+.|++.+..|
T Consensus 359 ge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 359 GEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22 6888899999999999999999998887643
No 105
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.68 E-value=7.6e-15 Score=128.11 Aligned_cols=286 Identities=11% Similarity=0.098 Sum_probs=166.2
Q ss_pred CccCCCCC---chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCC
Q psy4758 2 SKWAPPME---RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGAN----SPAQHPFI 74 (318)
Q Consensus 2 ~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 74 (318)
+|++|+++ |++++++...+.++|.++||.+++++.+. .|||+.|.+.++..++. ++.+.+.++ .|++++..
T Consensus 128 a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~ 205 (475)
T TIGR00924 128 GKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-YGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPL 205 (475)
T ss_pred HHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCc
Confidence 57787654 88899999999999999999999999987 89999999987554443 333333332 22111111
Q ss_pred ChhHhhhhhhc----------------cCccccc------------------cccCCcchhhhhcchhHHHHHHHHHHHH
Q psy4758 75 SLEERIYIETS----------------LVHSSTV------------------SSSMKVPWKAILTSLPVWAVLITHLCQN 120 (318)
Q Consensus 75 ~~~~~~~~~~~----------------~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (318)
++++++..... ..+.... ..++.....+-.|.+.+..+.+...+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 285 (475)
T TIGR00924 206 SGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFW 285 (475)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHH
Confidence 11111100000 0000000 0000011111112223444455555556
Q ss_pred HHHHHHHhhhhhhhhhhhccee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcC-cchHHHHHHHHHHHHHHHHH
Q psy4758 121 WGYWTLLTEMPSYINSVLQFDI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQI-LSPTVSRKMWNTIGLWGSAA 195 (318)
Q Consensus 121 ~~~~~~~~~~p~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~r~~~~~~~~~~~~~ 195 (318)
..+....+.++.+.++..+.+. ...+.+.+...+.-++..++..++-.|.++|.. ... ..-..+++++.++
T Consensus 286 ~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~----~~k~~~G~~l~~~ 361 (475)
T TIGR00924 286 VLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT----PLKFTLGMLFCGA 361 (475)
T ss_pred HHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc----HHHHHHHHHHHHH
Confidence 6666666777777766444332 225677777777777777776665566665411 100 0002456677766
Q ss_pred HHHHHHh---------cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 196 ALVGLSF---------VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 196 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
++..... ..+.++.....++.+.+-. ...+.......+..|++ ||+.+|+......+|..+++.+....
T Consensus 362 ~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~-~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 362 SFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL-MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred HHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665543 1222324444444444443 44556666666777666 99999999999999999999988877
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.+. .++...|...++..+++.++.+...+
T Consensus 441 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 441 AVP----QGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred hcc----cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 665 46677777777766666665555443
No 106
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.68 E-value=1e-15 Score=133.55 Aligned_cols=176 Identities=18% Similarity=0.145 Sum_probs=135.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRK 183 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~ 183 (318)
+.++.+.+..++...+++.+..++|.|+++. +|+++.+++...+...++..++.+++|+++|| +|+|+.+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l------- 82 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM------- 82 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-------
Confidence 4466677777778899999999999999887 89999999999999999999999999999999 8999977
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc----chhhHHHHHHHHHHHHHhHhh
Q psy4758 184 MWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN----FAGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~g~~~~~ 259 (318)
..+.++..++.+++...++.........+.+.+. +...+.......+..|+ +|+++.++.+...++|..+||
T Consensus 83 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~-g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 83 ---VLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGS-GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred ---HHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 6777777777777776554332333333333332 33444555555555543 388899999999999999999
Q ss_pred hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+.+++.+. .+|+..|.+.++..+++.+.....+
T Consensus 159 ~l~g~l~~~----~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 159 LLAGVIAEN----YGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHh----cChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999887 6899999888876666655544433
No 107
>KOG2615|consensus
Probab=99.67 E-value=7.9e-16 Score=123.74 Aligned_cols=256 Identities=16% Similarity=0.075 Sum_probs=150.4
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-CCCchHHHHHHHHH----HHHHHHHHHHHhcCCCCCCCCCC
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-PWGWPSIFYVSGAV----AIVWAAAWCYIGANSPAQHPFIS 75 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 75 (318)
++|.+++|+|++.++.+.+.+++|.++||.+|+++.+. ...=+.+|.....+ .........+++||+-+.+++.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~- 223 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN- 223 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-
Confidence 46899999999999999999999999999999999881 01112233332222 2221233555678874433322
Q ss_pred hhHhhhhhhccCccccccccCCcchhhhhcchh-------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhh
Q psy4758 76 LEERIYIETSLVHSSTVSSSMKVPWKAILTSLP-------VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFL 148 (318)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~ 148 (318)
++.....+...+++...+.....--..+||+. ...+.+.++.+...+.....+.+.+..+.+|+++.+.|.+
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v 302 (451)
T KOG2615|consen 224 -DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV 302 (451)
T ss_pred -ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence 11111111111110000001111112233432 1223333444444444444444545466799999999999
Q ss_pred chHHHHHHHHHHHHHHHhHHHHh--hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccc
Q psy4758 149 SAAPYLAQWILILVFSWLADYIV--AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYT 226 (318)
Q Consensus 149 ~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
.+..++.+.+......+..||.. .+-.+ ...+.++.-.++++........+.. ...+-.+......+
T Consensus 303 l~~tGl~m~~~ql~~~~~l~~~~~~~~a~l----------~~~l~~~vP~~llls~~~~~~~l~~-~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 303 LSTTGLLMLVIQLALVPILPRYKGNIKAVL----------LFSLLLIVPAFLLLSLARTPVVLYL-GSTLKSFSTASVVT 371 (451)
T ss_pred eehhhHHHHHHHHhccccccccccchhhHH----------HHHHHHHHHHHHHHhccccchhhhH-HHHHHHHHHHHhhH
Confidence 99988888887777777777665 22221 3344444444555555544442333 33333344445556
Q ss_pred cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
..........|++ ||+..|+..+.+.++-++||.+.|.+..+.
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 6666666777766 999999999999999999999999988764
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=4.1e-16 Score=135.66 Aligned_cols=254 Identities=9% Similarity=-0.008 Sum_probs=149.4
Q ss_pred CccCCCCCchh---HHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCChh
Q psy4758 2 SKWAPPMERAR---LFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA-QHPFISLE 77 (318)
Q Consensus 2 ~~~~~~~~r~~---~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (318)
.|..+ +++.. ..+......++|.++++.+++.+.+. .+||..|++.+.+.++. .+...+++|++. ..++..++
T Consensus 146 ~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~ 222 (468)
T TIGR00788 146 SERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-TLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTY 222 (468)
T ss_pred hhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-cCcchHHHHHHHHHHHH-HHHHHhccccccccccccccc
Confidence 35555 44433 33444444568999999999999988 89999999998888776 445566777541 11110000
Q ss_pred HhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHH
Q psy4758 78 ERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC-QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQ 156 (318)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~ 156 (318)
+...............++.....++.+++|.++...+..++ +.........+ -.+.++..|+++.+.|......+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~ 301 (468)
T TIGR00788 223 LEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGS 301 (468)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHH
Confidence 00000000000000001111234456778888776555555 22111111111 11333458999999999999999999
Q ss_pred HHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc----------CchhHHHHHHHHHHHHHhhhccc
Q psy4758 157 WILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV----------GDNLVGAITCLTLAIAINAGTYT 226 (318)
Q Consensus 157 ~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
+++....+++.+|++.|+.+ .++.++.+++....... ++........++...+......+
T Consensus 302 i~g~~~~~~~~~~~~~r~~l----------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~ 371 (468)
T TIGR00788 302 LCGVGGYDRFLKTFPYRLLF----------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMP 371 (468)
T ss_pred HHHHHHHHHHHhhCCHHHHH----------HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHcc
Confidence 99999999999999988865 45555555444322111 11111222223333333333333
Q ss_pred cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
. ..+..+..|++ +|+..++.+++.++|..+++.+++.+.+..+
T Consensus 372 ~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 372 F-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred H-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3 44555555555 9999999999999999999999999988744
No 109
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.67 E-value=3e-15 Score=131.43 Aligned_cols=179 Identities=15% Similarity=0.161 Sum_probs=130.7
Q ss_pred hhhcch-hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchH
Q psy4758 102 AILTSL-PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPT 179 (318)
Q Consensus 102 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~ 179 (318)
+.+++| .++..++..++..++++.+..++|.|+++.+|++..+++..............+++|+++|| +|+|+.+
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~--- 91 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI--- 91 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH---
Confidence 456776 48888888889999999999999999988899999888877776665555556789999999 5999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHHHHHHH
Q psy4758 180 VSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGCANIAS 255 (318)
Q Consensus 180 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~ 255 (318)
..+.++..++..++.+..+... ........+.+. +...+.......+.+|++ +..+.++.+...++|.
T Consensus 92 -------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~-g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~ 163 (500)
T PRK09584 92 -------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGN-GLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS 163 (500)
T ss_pred -------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhh-hcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH
Confidence 5666666766666665443332 222233333333 333445555566666543 4567888899999999
Q ss_pred hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.++|.+.|++.|. .+|+..|.+.++..+++.+....
T Consensus 164 ~~gp~i~g~l~~~----~g~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 164 FFSMLATPWLAAK----YGWSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 78999999887766666554443
No 110
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.67 E-value=2.8e-15 Score=129.88 Aligned_cols=171 Identities=17% Similarity=0.152 Sum_probs=128.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+.++...+.+++.......+..++|.+.++ +|+|+.+.+++.+...++..++.++.|++.||+|+|+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~---------- 91 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM---------- 91 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH----------
Confidence 334444555555555556777888988887 999999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
.++.++..++.++....++...+....++.+.+. +...+.......+.+|++ |++++|+.+...++|..++|.+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~-g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 92 GIGLIATGIINILFGFSSSLWAFALLWVLNAFFQ-GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777777777766655443333333334333 333455555666767655 99999999999999999999999999
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
.+. .+|+..|.+.+++.++..+..
T Consensus 171 ~~~----~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 171 ALH----YGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred HHc----ccHHHHHHHHHHHHHHHHHHH
Confidence 887 789999988877655544433
No 111
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=5.7e-16 Score=126.59 Aligned_cols=180 Identities=18% Similarity=0.153 Sum_probs=145.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+.+....+.+..++..-..+..-.|...++ .++|..|.|.+.+...+..-++.++.|.++||.+.|+.+
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm---------- 97 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM---------- 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee----------
Confidence 445556666666677777777778877777 789999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh--h
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV--G 263 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~--g 263 (318)
..+++++++..+++.+.++.. +...+..+...+.+...+.....+...+|++ ||+..++.|...|+|+++.|.+. +
T Consensus 98 ~~gLilsai~nil~Gfs~s~~-~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLF-LFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 789999999999999887544 4444455555555555555555555555555 99999999999999999999999 8
Q ss_pred eeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758 264 FIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302 (318)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (318)
.+.++ .+|+..|++-+++.++..++.+...|.+++
T Consensus 177 ~~~~~----~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 177 FFAFH----GGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHhc----cchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 88887 799999999999988888777777665544
No 112
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.66 E-value=2.2e-14 Score=123.25 Aligned_cols=280 Identities=14% Similarity=0.058 Sum_probs=179.9
Q ss_pred CCccCCCCCc--hhHHHHHHhhHhhHHHhHHHHHHHHh--CC------------CCCchHHHHHHHHHHHHHHHHHHHHh
Q psy4758 1 MSKWAPPMER--ARLFSFAFSGTQFGNLVTLPVAGLLA--GS------------PWGWPSIFYVSGAVAIVWAAAWCYIG 64 (318)
Q Consensus 1 i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~l~--~~------------~~gWr~~f~~~~~~~~~~~~~~~~~~ 64 (318)
++|.+|+++| +.+.++.+...++|.++|+.+++... +. ..+.|..|++.++..++..++..+..
T Consensus 139 iaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v 218 (477)
T TIGR01301 139 LADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAV 218 (477)
T ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence 5789998765 68999999999999999999998752 11 01679999999888888888888888
Q ss_pred cCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcc-----hhHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hh
Q psy4758 65 ANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTS-----LPVWAVLITHLCQNWGYWTLLTEMPSYINS-VL 138 (318)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~ 138 (318)
||.|...++..++++ .+++++ ......+++++++ |.++.+++..++..++++.+..|.+.|.-+ .+
T Consensus 219 ~E~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~ 290 (477)
T TIGR01301 219 KENPLIGSDDFINSE------AAPPSK--HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVY 290 (477)
T ss_pred eccCCCccccchhhh------cccccc--cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHc
Confidence 887642211110000 000000 1112234555443 778999999999999999999999998864 45
Q ss_pred cceeec------h---h-hhchHHHHHHHHHHHHHHHhHHHHhhh-cCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc--
Q psy4758 139 QFDIKS------N---G-FLSAAPYLAQWILILVFSWLADYIVAK-QILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-- 205 (318)
Q Consensus 139 g~~~~~------~---~-~~~~~~~~~~~~~~~~~g~l~dr~g~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-- 205 (318)
+-++.+ . | +......+...+.+++..++.+|+|+| +.. .++.++.++++....+..+
T Consensus 291 ~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~----------~~s~~~~~~~l~~~~~i~~~~ 360 (477)
T TIGR01301 291 GGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLW----------GIVNIILAICLAATVLVTYVA 360 (477)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHHHhhh
Confidence 433221 1 2 223334445556667778888888854 432 4555555665555543321
Q ss_pred -------------------hhHHHHHHHHHHHHHhhhccccccccccccCc--cchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 206 -------------------NLVGAITCLTLAIAINAGTYTGFLSNHLDLSP--NFAGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 206 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
..........+|..........+.....+..+ ++.|..+|+.|.+..+.+.+.....|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~ 440 (477)
T TIGR01301 361 KNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP 440 (477)
T ss_pred hccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 02133444445555555444444444444443 337999999999999999999988888
Q ss_pred eeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
+.+..++ +-..++.+.++..+++.++..+..++.
T Consensus 441 ~~~~~g~--~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 441 WDQLFGG--GNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHHHcCC--CCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6555443 235577778888888887777665443
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.65 E-value=2.4e-14 Score=117.54 Aligned_cols=271 Identities=15% Similarity=0.151 Sum_probs=185.3
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHH---HHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYV---SGAVAIVWAAAWCYIGANSPAQHPFISLEE 78 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (318)
+|..|+|+|+++.++.....-+|.+++..+.+.+.+. +.-.-..-+ .+++.++..++..+ -.|++.++....+++
T Consensus 115 ~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~-~s~~rL~~v~~~~a~i~~~l~~ia~w-g~E~r~~~~~~~~~~ 192 (403)
T PF03209_consen 115 ADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP-FSPERLIQVIQGVALIALLLNLIALW-GQEPRRSRRAAAAER 192 (403)
T ss_pred HhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCcccccCCCC
Confidence 6889999999999999999999999999999988886 543222222 22223322222222 223222211100000
Q ss_pred hhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758 79 RIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI 158 (318)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 158 (318)
+ +......++++..+|+...+....+....+++.-...+-+|--+++|++..++..+....+.+..+
T Consensus 193 ~-------------~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~ 259 (403)
T PF03209_consen 193 P-------------RPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLL 259 (403)
T ss_pred C-------------CccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0 033345677788889988888888888888888888899999999999999999999999999999
Q ss_pred HHHHHHHhHH-HHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758 159 LILVFSWLAD-YIVAKQILSPTVSRKMWNTIGLWGSAAALVGL---SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD 234 (318)
Q Consensus 159 ~~~~~g~l~d-r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
+-...|++.. |.++++.. .+++..+.+++.++ ....+.+.+....+.++.+.+..........+.-
T Consensus 260 G~~~~g~~l~~~~~~~~~a----------~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~l 329 (403)
T PF03209_consen 260 GMLLAGFLLSRRLGKKRTA----------ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDL 329 (403)
T ss_pred HHHHHHHHhcCCCCchHHH----------HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 9999998777 44444432 34554444444433 3334444455555666666555555555554544
Q ss_pred cCccchhhHHHHHHHHHHHHHhHhhhhhheeeccC----C--CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 235 LSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDN----T--SVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 235 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
..+++.|..+|.....+.+...++..++|.+.|.. + ...+|..+|.+-++..++++.+...+.
T Consensus 330 t~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 330 TSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRLD 398 (403)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666999999999999999999999999888751 2 346788888888887777766665443
No 114
>KOG0254|consensus
Probab=99.65 E-value=3.1e-15 Score=132.16 Aligned_cols=274 Identities=16% Similarity=0.081 Sum_probs=169.5
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (318)
++|..|++.||...+..+....+|..++..++....+...+||..+.+..+.+++..+. .+++||+|+.--+ -+.++.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 46889999999999999999999999995555544332148999999999988888676 8889999873211 111111
Q ss_pred hhhhhccCc--ccc----------------ccccCCcchhhhhc----chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy4758 80 IYIETSLVH--SST----------------VSSSMKVPWKAILT----SLPVWAVLITHLCQNWGYWTLLTEMPSYINSV 137 (318)
Q Consensus 80 ~~~~~~~~~--~~~----------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 137 (318)
+........ +.+ .....+..++++++ ++.++...+..+.+..+.+....|.+.+++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 111111100 000 00011112344443 3445566677777777778888899999887
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---C-c-------h
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---G-D-------N 206 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~-------~ 206 (318)
.|.+... .......++..+++..++..+.||+|||+.+ +.+.....++.+++... . . .
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~ 393 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGA 393 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence 6665443 4555666778888888989999999999987 34444444444333321 1 1 1
Q ss_pred hH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 207 LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 207 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
.. .....++....+.....+.......|.+|.+ |+.+.++......+.+.+-......+.+. .+....|...+.
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~----~~~~~~f~~f~~ 469 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA----LGIGGTFGYFGG 469 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh----ccccchHHHHHH
Confidence 11 2222333333444445555556778999998 99999999999988887666555555444 122334554555
Q ss_pred HHHHHHH
Q psy4758 285 IFFFGNL 291 (318)
Q Consensus 285 ~~~~~~~ 291 (318)
.+.+...
T Consensus 470 ~~~~~~~ 476 (513)
T KOG0254|consen 470 ICLLSLI 476 (513)
T ss_pred HHHHHHH
Confidence 5455444
No 115
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.64 E-value=3.8e-15 Score=125.56 Aligned_cols=165 Identities=23% Similarity=0.354 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS 193 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 193 (318)
+..++...........+|.++.+++|.++.+.+++.+...++..++.++.|+++||+|+|+.+ ..+.++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~ 72 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL----------IIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE----------eehhhhh
Confidence 455666666667777788566666999999999999999999999999999999999999965 5666666
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758 194 AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV 272 (318)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 272 (318)
+++.....+.++.+......++.+.+. +...+....+..+..|+ +|++++++.+...++|..++|.+.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---- 147 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY---- 147 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----
T ss_pred hhHHHHhhhhhhHHHHhhhcccccccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc----
Confidence 666444434344443444444444443 44556666666677776 599999999999999999999999999977
Q ss_pred cchHHHHHHHHHHHHHHHHHH
Q psy4758 273 SQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~ 293 (318)
.+|+..|++.+++.++..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 148 FGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp CHHCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhH
Confidence 789999999998888887653
No 116
>PRK11462 putative transporter; Provisional
Probab=99.64 E-value=9.8e-15 Score=126.98 Aligned_cols=231 Identities=14% Similarity=0.059 Sum_probs=136.3
Q ss_pred CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
++||++..++...+..+|..+++.+...+.+. ..+|+....+.++++++...+.+...+|.+++++ ++
T Consensus 141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-----~~- 214 (460)
T PRK11462 141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-----TT- 214 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-----cC-
Confidence 68999999999999999988887775544332 1368888888887777765555555555432211 00
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
.+.+..++.+++||.++.+....++..............|.+...|.+ ...+.+.....++++++.
T Consensus 215 -------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~ 280 (460)
T PRK11462 215 -------------TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGS 280 (460)
T ss_pred -------------CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHH
Confidence 111234667888988877766666655555444444444444434432 334455667778889999
Q ss_pred HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHHHHHhhhccccccccccccCc-
Q psy4758 161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDLSP- 237 (318)
Q Consensus 161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (318)
+++++++||+++|+.. ..+..+..+...++.+.+.... .....++.+.+. +...+.......|..+
T Consensus 281 ~l~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~ 349 (460)
T PRK11462 281 ALAKPLTDWKCKVTIF----------WWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDY 349 (460)
T ss_pred HHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhh
Confidence 9999999999998754 2222222222222222222221 222222233332 2222322333444433
Q ss_pred ------cc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 238 ------NF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 238 ------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
++ .|...+..+....+|.++++.+.|.+.+.
T Consensus 350 ~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 350 GEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred hHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 45556777788999999999998888765
No 117
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.62 E-value=1.1e-14 Score=127.19 Aligned_cols=175 Identities=14% Similarity=0.118 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRKMW 185 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~~~ 185 (318)
|.++..++..+...+++|.+..+++.|+++.+|++..+++...........+..+++|+++|| +||||.+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~--------- 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI--------- 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH---------
Confidence 557777778888899999999999999999899999999888888887888888899999999 9999987
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHH-HHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHHHHHHHhHhhhh
Q psy4758 186 NTIGLWGSAAALVGLSFVGDNLVGA-ITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
..+.++..++.+.+....+..... ......+.+ .+...+.......+.+|++ |+.+.++.+...++|..++|.+
T Consensus 85 -~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig-~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 85 -VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG-NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred -HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc-cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 677777777777666654433222 333333333 3334445556666666544 4778999999999999999999
Q ss_pred hheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 262 VGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
.+++.++ .+|+..|++.++..+++.+.....
T Consensus 163 ~g~l~~~----~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 163 APVIADK----FGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHh----hChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999988 689999988766555444444443
No 118
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.62 E-value=1.1e-14 Score=124.79 Aligned_cols=170 Identities=12% Similarity=0.160 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG 189 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 189 (318)
+......++...+.+....++|.|++++.|+|+.+.|+..+...+...+..++.|+++||+|+|+.+ ..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l----------~~~ 82 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI----------VTG 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH----------HHH
Confidence 4455677788888888899999999888999999999999999999999999999999999999876 667
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.++..++.+.....++.+...+..++.+.+. +...+.......+..| ++|+++.|+.+...++|..+||.+.+++. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~ 160 (400)
T PRK11646 83 MLMRAAGFATMAIAHEPWLLWLSCILSGLGG-TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q 160 (400)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 7777777777766655443444444444443 2333444445555554 45999999999999999999999999998 4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 269 NTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+|+..|++.+...++..++...
T Consensus 161 ----~g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 161 ----YDFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 57899998887776665544433
No 119
>PRK03699 putative transporter; Provisional
Probab=99.61 E-value=4.3e-14 Score=121.04 Aligned_cols=173 Identities=14% Similarity=0.157 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+-++...+..++...........+|.+.++ +|+|..+.++..+...++..++.++.|++.||+|+|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~---------- 75 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL---------- 75 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----------
Confidence 334555555666556666677778887766 899999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+.++..++..+..+.++.....+..++.+.+... ..+.......+..|++ |+.+.+..+....+++.++|.+.+.+
T Consensus 76 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGI-TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHh-hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666655544333344444444333 3344445556666765 99999998888899999999998887
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+.. .+|+..|...+++.++..++.+
T Consensus 155 ~~~~---~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 155 LARS---IEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred Hhcc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 6542 6899999887777666554443
No 120
>PRK10504 putative transporter; Provisional
Probab=99.61 E-value=1.6e-14 Score=126.77 Aligned_cols=176 Identities=17% Similarity=0.195 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+.+|...+..++.....+.+..++|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~---------- 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF---------- 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH----------
Confidence 457777888888888888888999999987 999999999998888899999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+..+..++.+.....++...+....++.+.+... ..+.......+..|++ |+++.|+.+...++|..++|.+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAM-MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 455555555555555555444344444444444433 3344445555666655 99999999999999999999999999
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.+. .+|+..|.+......++.+......+
T Consensus 158 ~~~----~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 158 VEY----ASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred Hhh----ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 987 68999999887776666655554433
No 121
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=7.9e-15 Score=126.58 Aligned_cols=184 Identities=18% Similarity=0.107 Sum_probs=129.9
Q ss_pred cchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcc
Q psy4758 98 VPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILS 177 (318)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 177 (318)
.+++.+.|+|.+....+..++...+........|.+.++ .+.++.+.|...+...++..+++++.|+++||++||+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 445556678888888888888888877788888988877 7789999999999999999999999999999999999873
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---h--cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH
Q psy4758 178 PTVSRKMWNTIGLWGSAAALVGLS---F--VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA 251 (318)
Q Consensus 178 ~~~~r~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 251 (318)
.+..+.+++..... + .++........+..+.+.. ...+.......+..|++ |+++.++.+...
T Consensus 87 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (417)
T PRK10489 87 ----------LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS-LGVTALLAATPALVGRENLMQAGAITMLTV 155 (417)
T ss_pred ----------ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHhhhhhhccCHHHHHHHHHHHHHHH
Confidence 33333333332221 1 1222223333333333322 23334444455555554 999999999999
Q ss_pred HHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 252 NIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 252 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
++|..+||.+.+.+.+. .+|++.+.+.++..++..+.....+
T Consensus 156 ~~g~~~g~~l~g~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 156 RLGSVISPALGGLLIAA----GGVAWNYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred hHHHHhHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999887 6788888877776666655544443
No 122
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.61 E-value=1.9e-14 Score=126.01 Aligned_cols=170 Identities=13% Similarity=0.130 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH
Q psy4758 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA 195 (318)
Q Consensus 116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~ 195 (318)
.++.....+....+.|.+.++ +|++..+.+...+...++..++.++.|+++||+|+|+.+ ..+.++..+
T Consensus 45 ~~~~~~~~~~~~~~~~~l~~~-~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~----------~~~~~~~~~ 113 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIRDN-LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS----------AFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHH
Confidence 333344444445555655555 999999999988888889999999999999999999865 556666666
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc-----C
Q psy4758 196 ALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD-----N 269 (318)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~ 269 (318)
+.++..+.++...+.+..++.+.+.... .+ ......+..|++ ||+++|+.+...++|+.+++.+.+.+.+. .
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATF-VS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhh-HH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666666655443434444455444322 22 233455666655 99999999988888888887776554321 0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 270 TSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.+..+|+..|++.+++.++..+...++.+
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11248999999988887776666555543
No 123
>KOG0252|consensus
Probab=99.61 E-value=3.2e-16 Score=128.95 Aligned_cols=292 Identities=13% Similarity=0.100 Sum_probs=190.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC---C-----------CCCchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG---S-----------PWGWPSIFYVSGAVAIVWAAAWCYIGANS 67 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---~-----------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~ 67 (318)
+|...+++||...+...+..+.|...|.+++-.+.. . +.-||..|.+.+++++.+ +.....+||+
T Consensus 170 SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et 248 (538)
T KOG0252|consen 170 SESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPET 248 (538)
T ss_pred hhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcc
Confidence 577788999999999999999998888877765543 1 124999999888777764 4445567887
Q ss_pred CCCCCC--CChh-----HhhhhhhccCcccccc---ccCCcc---hhhhhcc---hhHHHHHHHHHHHHHHHHHHHhhhh
Q psy4758 68 PAQHPF--ISLE-----ERIYIETSLVHSSTVS---SSMKVP---WKAILTS---LPVWAVLITHLCQNWGYWTLLTEMP 131 (318)
Q Consensus 68 ~~~~~~--~~~~-----~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p 131 (318)
++-..- .+.+ .++......++++... +.++.. +...+.. +..+..+..+|+.-.++|....+..
T Consensus 249 ~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s 328 (538)
T KOG0252|consen 249 ARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQS 328 (538)
T ss_pred hhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHH
Confidence 652200 0000 0000000011110000 111111 2222222 4566777888888999999999999
Q ss_pred hhhhhhhcceeechhh--------hchHHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758 132 SYINSVLQFDIKSNGF--------LSAAPY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF 202 (318)
Q Consensus 132 ~~l~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 202 (318)
..+++ .|+.+.+... ...+.. .+.+.|..+...++|++||++.. +.++++..+..+.+..
T Consensus 329 ~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq----------~~GF~~~~i~~~~~~~ 397 (538)
T KOG0252|consen 329 VIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ----------LMGFFIMTIFFFVIAG 397 (538)
T ss_pred HHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH----------HhhHHHHHHHHHHHcC
Confidence 98887 6776554433 111222 22344666677789999999876 6778888777777665
Q ss_pred cCchhH----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC-CCccchH
Q psy4758 203 VGDNLV----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN-TSVSQWQ 276 (318)
Q Consensus 203 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~ 276 (318)
..++.. ..+...+..++...+.......+..|.+|.+ |++..|+....+-.|+.++.....++.++. ....+.+
T Consensus 398 ~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~ 477 (538)
T KOG0252|consen 398 PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVR 477 (538)
T ss_pred CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccch
Confidence 544211 2222233333334455566777888999999 999999999999999999999999998832 1126789
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCC
Q psy4758 277 TIFLIAAAIFFFGNLIFLIFGTSEVQPWN 305 (318)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (318)
.++++.+++++++.+..+++++.+++..+
T Consensus 478 ~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 478 NVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred HHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 99999999999999998888865555443
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=1.1e-14 Score=125.92 Aligned_cols=182 Identities=9% Similarity=0.046 Sum_probs=120.8
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 181 (318)
+.+++|++|...+..++...+......++|.|+++++|+++.+.|...+...++..+++++.|+++||+|+|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~----- 79 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL----- 79 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 456789999999999999988888999999999998999999999999999999999999999999999999865
Q ss_pred HHHHHHHHHHHHHHHHH---HHHhcCchhHHHHHHHHHHHHHhhhcccccccccccc---CccchhhHHHHHHHHHHHHH
Q psy4758 182 RKMWNTIGLWGSAAALV---GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL---SPNFAGTLMGFTNGCANIAS 255 (318)
Q Consensus 182 r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~ 255 (318)
.++..+..+... .....+...........++....+...........+. .+++++..+|......++|.
T Consensus 80 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 154 (420)
T PRK09528 80 -----LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGW 154 (420)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHH
Confidence 222222222211 1111100000011111111111111111111111222 23347778888899999999
Q ss_pred hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.++|.+.+.+.+. +|+..|++.++..++..++.+..++
T Consensus 155 ~i~~~~~g~l~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 155 ALCAFIAGILFNI-----NPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HHHHHHHHHHHhc-----CchHhHHHHHHHHHHHHHHHhcccc
Confidence 9999999998764 5677888877776666655554443
No 125
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.61 E-value=3.8e-14 Score=124.80 Aligned_cols=175 Identities=15% Similarity=0.101 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI 188 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 188 (318)
+..+++..++...-...+..-+|.+.++ +|.+..+.++..+.+.++...+.+..|+++||+|||+.+ ..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l----------~~ 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL----------ML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence 4455566666666666777788988777 899999999999999999999999999999999999977 67
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
+..+..++.+.....++.+.+.+...+.+.+.....+........+..| ++|+++.|+.....++|..+||.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 7777778777777776665455555556655544333333334445444 459999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 268 DNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
. .+|++.|++...+.++..++.....+
T Consensus 157 ~----~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 157 H----FYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred c----CChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8 78999999888777766655554443
No 126
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.60 E-value=7.8e-15 Score=124.26 Aligned_cols=171 Identities=18% Similarity=0.114 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
.+....++...+.......+|.|..+ .+.++.+.++..+...++..++.++.|+++||+|||+.+ ..+.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~----------~~~~ 71 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM----------IGAD 71 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH----------HHHH
Confidence 34556666667777777888888887 899999999999999999999999999999999999976 4454
Q ss_pred HHHHHHHHHHHhcC-----chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 191 WGSAAALVGLSFVG-----DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 191 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
++..++..+..... +.+......++.+.+ .+...+....+..|..|++ |+++.++.+....+|..++|.+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 150 (365)
T TIGR00900 72 LIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIA-QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL 150 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 44444444443333 333233334444433 3344555666667777665 9999999999999999999999999
Q ss_pred eeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+.+. .+|+..+++.++..+++.+.....+
T Consensus 151 l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 151 MYAT----LGIKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHH----hhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9887 6899999887776666555544443
No 127
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.60 E-value=2e-14 Score=121.98 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=122.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
.++..++..+......+....+.|.++++++|+|+.+.++..+...++..++.++.|+++||+|+|+.+ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~ 71 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT----------T 71 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH----------H
Confidence 456677777788888888899999877777999999999999999999999999999999999999876 6
Q ss_pred HHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 188 IGLWGSAAALVGLSFVG-DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
.+.++..++.+...+.+ +.....+..++.+.+. ... .....+..+..|+ +|+++.++.....++|..+++.+.+.+
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 67777777777776665 4443444444444442 222 3334455566665 499999999988888888887777665
Q ss_pred eccC----C--CccchHHHH-HHHHHHHHHHHHH
Q psy4758 266 VTDN----T--SVSQWQTIF-LIAAAIFFFGNLI 292 (318)
Q Consensus 266 ~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~ 292 (318)
.+.. + ...+|+..+ ...+++..+..++
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 183 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALL 183 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHH
Confidence 5421 0 114788888 4334444333333
No 128
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.59 E-value=2e-13 Score=119.92 Aligned_cols=285 Identities=13% Similarity=0.074 Sum_probs=150.2
Q ss_pred CccCCCCC--chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHH---HHHHHHhcCCCCCCCCCCh
Q psy4758 2 SKWAPPME--RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWA---AAWCYIGANSPAQHPFISL 76 (318)
Q Consensus 2 ~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 76 (318)
+|++|+++ |..++++++.+.++|..++|.+++++.+. .|||+.|++.++..++.. +.....++|.+++++..+.
T Consensus 138 ~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 216 (500)
T PRK09584 138 STCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-YGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPI 216 (500)
T ss_pred HHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCcccc
Confidence 57787643 55688999999999999999999999998 899999999875444332 2233344443211111000
Q ss_pred hHhhhhh------------h-ccCcccccc------------c--cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhh
Q psy4758 77 EERIYIE------------T-SLVHSSTVS------------S--SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTE 129 (318)
Q Consensus 77 ~~~~~~~------------~-~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (318)
+...... . .....+... . ......++.-+ ++.+.. +..+.....++.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q 294 (500)
T PRK09584 217 NYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQ 294 (500)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHH
Confidence 0000000 0 000000000 0 00000011112 222222 2233445556666666
Q ss_pred hhhhhhhh--hccee------echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 130 MPSYINSV--LQFDI------KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS 201 (318)
Q Consensus 130 ~p~~l~~~--~g~~~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 201 (318)
.|.++... .+.+. ...+.+.+...+..++..++.+++-+|.++|... .....+++++.++++..+.
T Consensus 295 ~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~------~~~~~~G~~l~~l~f~~l~ 368 (500)
T PRK09584 295 MPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM------PHKFAIGMVLCSGAFLVLP 368 (500)
T ss_pred hccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc------HHHHHHHHHHHHHHHHHHH
Confidence 67665531 11221 2244555566667777777776766776655321 1123667777777776655
Q ss_pred hcCc---------hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee-----
Q psy4758 202 FVGD---------NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV----- 266 (318)
Q Consensus 202 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~----- 266 (318)
...+ .++.....++.+.+. ....+.......+..|++ ||+.+|+......+|..++..+.+...
T Consensus 369 ~~~~~~~~~~~vs~~~~~~~~~l~~~ge-~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~ 447 (500)
T PRK09584 369 LGAKFANDAGIVSVNWLIASYGLQSIGE-LMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNV 447 (500)
T ss_pred HHHHhcCCCCccCHHHHHHHHHHHHHHH-HHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4432 122333334444443 334455555566666766 999999887766677766666654221
Q ss_pred -ccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 267 -TDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 267 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
|......++...|...++..++..++.+..
T Consensus 448 ~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 448 TDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 110011246778877777666555444443
No 129
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.5e-14 Score=117.34 Aligned_cols=177 Identities=14% Similarity=0.070 Sum_probs=150.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
...+.+.+..|......+.....+|+.-+| +|.|..++|.+.+.+.++..+++++...+.||+.||+.+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL---------- 81 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL---------- 81 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH----------
Confidence 345677788888888999999999999999 999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
...+.+..++.++..+.++...+.+.-++.+...+............-++|++|++++++......++..+|.+++.++-
T Consensus 82 l~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 82 LGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 77888889999999999888877777777776655544444444444445556999999999999999999999999999
Q ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 267 TDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
|. .||+.+|...+++.++..+..+...+
T Consensus 162 ~~----~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 162 QL----FGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HH----hhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 89999999999998888777666555
No 130
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.58 E-value=2.4e-14 Score=122.26 Aligned_cols=171 Identities=15% Similarity=0.119 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
......+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+ ..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~ 77 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL----------LLGL 77 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHH
Confidence 33333444445555555666766655 999999999999999999999999999999999999876 5666
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
++..++.+.....++........++.+.+.. ...+.......|..|++ |+++.++.+....+|..++|.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~- 155 (385)
T TIGR00710 78 FIFALSSLGLALSNNIETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW- 155 (385)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 6666766666666554433333444443333 33445555666766655 99999999999999999999999998887
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 270 TSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+|+..+++.+++.++..+......
T Consensus 156 ---~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 156 ---LSWHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999888877776665554443
No 131
>KOG0255|consensus
Probab=99.58 E-value=2.6e-13 Score=120.53 Aligned_cols=246 Identities=16% Similarity=0.142 Sum_probs=153.2
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-hhHh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFIS-LEER 79 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (318)
++|++++++|+.+..+ ......++.+++..++++.. +||+.+++..+++++..++ +++.||+|+...... .++.
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a 270 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEA 270 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHH
Confidence 3699999999999999 77888888888888888876 6999999999998876444 566669887321111 1111
Q ss_pred hhhhhcc------Ccc--------------ccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc
Q psy4758 80 IYIETSL------VHS--------------STVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ 139 (318)
Q Consensus 80 ~~~~~~~------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 139 (318)
....++. ..+ ......++..+.++++.|++....+...+..+.+ ....+.-.+..+..|
T Consensus 271 ~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~y~gl~~~~~~lg 349 (521)
T KOG0255|consen 271 IKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-SLVYYGLSLNVSGLG 349 (521)
T ss_pred HHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-hHHHHhhhhhhhhcC
Confidence 1110000 000 0000122345677788775443333333322221 222222122222233
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLA 217 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 217 (318)
.+. .......+.....+....+...|+.|||... ..+..+..++++...+...... .......++
T Consensus 350 ~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
T KOG0255|consen 350 GNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPL----------FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG 416 (521)
T ss_pred chH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 332 2333334446666777778999999888765 6777777777777777665443 334444445
Q ss_pred HHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 218 IAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
.+...........+..|+.|+. |..+.+..+....+++.++|.+.-..
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555588888999998 99999999999999999999987544
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=3.4e-14 Score=121.55 Aligned_cols=171 Identities=14% Similarity=0.091 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI 188 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 188 (318)
++.+.+..+......+.....+|.+.++ +|.++.+.++..+...++..++.+..|++.||+|||+.+ ..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~ 79 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL----------IG 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH----------HH
Confidence 3444444444333334444556776665 999999999999999999999999999999999999976 66
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
+..+..++.+...+.++.+.+.+..+..+.+.. ...+.......+..|+ +|++++|+.....++|..++|.+.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 80 LFVLFIASHVLSALAWNFTVLLISRIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 777777777777776665544444444444432 2334444555566554 59999999999999999999999999888
Q ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 268 DNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
. .+|+..|++.+++.++..+....
T Consensus 159 ~----~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 159 Y----LGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred H----hcHHHHHHHHHHHHHHHHHHHHH
Confidence 7 78999999988877766555444
No 133
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.58 E-value=3.7e-14 Score=120.97 Aligned_cols=172 Identities=10% Similarity=0.049 Sum_probs=134.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+.++...+..+............+|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+|+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~---------- 71 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL---------- 71 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH----------
Confidence 456677777777777878888888887766 899999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+..+.+++.++..+.++.+.+.+..++.+.+.... .+.......+..|++ |++++++......++..++|.+.+.+
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 72 LFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAF-FGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 6677777777777777766554555555555444332 233344555666665 99999999999999999999999998
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+. .+|+..|.+.++..++..+...
T Consensus 151 ~~~----~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 151 SQE----FSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred hhh----ccHHHHHHHHHHHHHHHHHHHH
Confidence 887 6899999988877666554433
No 134
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.58 E-value=2.5e-14 Score=122.99 Aligned_cols=171 Identities=12% Similarity=0.223 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
.+....+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+ .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~ 81 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM----------V 81 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------H
Confidence 34455666666666666677777766555 999999999999999999999999999999999999976 5
Q ss_pred HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
.+.++..++.+...+.++...+....++.+.+... ..+....+..|..|++ |+++.++.+....+|..+++.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGG-EYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhh-hhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666666554444444555554443 3344445555655554 999999999999999999999999888
Q ss_pred ccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758 267 TDNTSVSQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
+..+ .+|+..|.+.++..++..+.
T Consensus 161 ~~~~--~~w~~~f~~~~~~~~~~~~~ 184 (405)
T TIGR00891 161 PVWG--DGWRALFFISILPIIFALWL 184 (405)
T ss_pred HhcC--ccHHHHHHHHHHHHHHHHHH
Confidence 7632 24898888765555444433
No 135
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.58 E-value=4.4e-14 Score=124.48 Aligned_cols=172 Identities=16% Similarity=0.199 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG 189 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 189 (318)
..+.+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+ ..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~ 73 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF----------LIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH----------HHH
Confidence 344555566666666677778888777 899999999999999999999999999999999999876 667
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.++..++.......++........++.+.+... ..+....+..+..|+ +|+++.++......+|..++|.+.+++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 74 TFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 777777777777666555444445555544433 344555556666665 499999999999999999999999999887
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 269 NTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+|+..|++.+.+.++..++.....
T Consensus 153 ----~~w~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 153 ----YHWRWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred ----cCceehhhhhhHHHHHHHHHHHHHc
Confidence 7899999888777666655554443
No 136
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.58 E-value=5.3e-14 Score=120.48 Aligned_cols=175 Identities=16% Similarity=0.080 Sum_probs=127.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
|-+....+..+....+.......+|.+.++ +|.+..+.+...+...++..++.++.|+++||+|||+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l---------- 71 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA---------- 71 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH----------
Confidence 334445555556666666677788888777 899999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+.++..++.......++........++.+.+... ..+.......+..|+ +|+++.++.+...+++..++|.+.+.+
T Consensus 72 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 72 IPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGC-CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666666655544333334444443332 233344455565554 499999999999999999999999888
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+. .+|+..+++.+++.++..++.....
T Consensus 151 ~~~----~g~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 151 MLK----FPWQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred HhC----cChHHHHHHHHHHHHHHHHHHHHHc
Confidence 776 6899999888877776666554443
No 137
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.57 E-value=1.8e-14 Score=123.32 Aligned_cols=161 Identities=19% Similarity=0.208 Sum_probs=122.0
Q ss_pred HHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 121 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
.....+....|. +++++|.++.+.+++.+...++..++.++.|+++||+|||+.+ ..+.++..++....
T Consensus 8 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 8 LDRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL----------AVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee----------HHHHHHHHHHHHHH
Confidence 333444455565 4455999999999999999999999999999999999999987 56666667766666
Q ss_pred HhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHH
Q psy4758 201 SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIF 279 (318)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 279 (318)
...++.....+..++.+.+. +...+....+..|..|++ |++++++.+...++|..++|.+.+.+.+. .+|+..|
T Consensus 77 ~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~ 151 (399)
T TIGR00893 77 AFAGAYVSLYILRVLLGAAE-APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH----FSWQWAF 151 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHH-HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh----CCchHHH
Confidence 66665544444445555553 334556666677777765 99999999999999999999999998887 6799999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q psy4758 280 LIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~ 297 (318)
.+.+++.++..+......
T Consensus 152 ~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 152 IIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHHHHHHHHHhhhee
Confidence 888777666655554433
No 138
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.57 E-value=5.8e-14 Score=120.06 Aligned_cols=157 Identities=12% Similarity=0.065 Sum_probs=119.8
Q ss_pred HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
....+.....+|.+.++ +|.++.+.+...+...++..++.++.|++.||+|||+.+ ..+.++.+++.+.
T Consensus 33 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~ 101 (394)
T PRK10213 33 IIVEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV----------ILFAVLLTLSCLL 101 (394)
T ss_pred HHHHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH----------HHHHHHHHHHHHH
Confidence 33334445567777666 899999999999999999999999999999999999976 6677777777777
Q ss_pred HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758 200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI 278 (318)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 278 (318)
....++.+.+.+..++.+.+.+. ..+.......+..|++ |+++.++.....+++..++|.+.+.+.+. .+|+..
T Consensus 102 ~~~~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~----~gw~~~ 176 (394)
T PRK10213 102 VSFANSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL----IGWRNV 176 (394)
T ss_pred HHHHChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCHHHH
Confidence 66665555455555555555444 3445555556667655 99999999999999999999999999887 789999
Q ss_pred HHHHHHHHHHHHHH
Q psy4758 279 FLIAAAIFFFGNLI 292 (318)
Q Consensus 279 ~~~~~~~~~~~~~~ 292 (318)
|++.+++.++..+.
T Consensus 177 f~~~~~l~~~~~l~ 190 (394)
T PRK10213 177 FNAAAVMGVLCIFW 190 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 98887666554433
No 139
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=3e-14 Score=121.19 Aligned_cols=163 Identities=11% Similarity=0.049 Sum_probs=119.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV 198 (318)
Q Consensus 119 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~ 198 (318)
.....+......|.+.++ +|.+..+.+...+...++..++.++.|+++||+|||+.+ ..+.++..++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~----------~~~~~~~~~~~~ 83 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRY-FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA----------MLGGILYGLGFT 83 (377)
T ss_pred HhhHHhhhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh----------HHhHHHHHHHHH
Confidence 333355555666666555 999999999999999999999999999999999999987 667777777777
Q ss_pred HHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758 199 GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI 278 (318)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 278 (318)
.....++.........+.+.+... ..+.......+.+|++|+++.++.....++|..+++.+.+.+.+. .+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~ 158 (377)
T TIGR00890 84 FYAIADSLAALYLTYGLASAGVGI-AYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL----EGVPAA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc----ccHHHH
Confidence 776665544343444444444332 233333445566788899999999999999988877777777666 689999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy4758 279 FLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~ 297 (318)
|++.+++.++..+......
T Consensus 159 f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 159 FIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHHHHhe
Confidence 9988887777665554443
No 140
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=7.9e-14 Score=120.03 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG 189 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 189 (318)
.......+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+|+.+ ..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~ 86 (406)
T PRK11551 18 GLCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL----------IVS 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHH
Confidence 334445555555566666777777766 899999999999999999999999999999999999987 555
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.++..++.+.....++.....+..++.+.+... ..+.......|..|+ +|++++++.+....+|..+++.+.+.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 87 VALFGLFSLATAQAWDFPSLLVARLLTGVGLGG-ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 556666655565555544344444444444333 344555566666665 499999999999999999999998887776
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 269 NTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+|+..|++.+++.++..+....
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 166 ----AAWRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999998877665555544443
No 141
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.56 E-value=7e-14 Score=119.87 Aligned_cols=175 Identities=12% Similarity=0.106 Sum_probs=118.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
||.+|.+...+++.+.+...+..++|.|+.+++|+++.+.|...+...++..++.++.|+++||+|||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~--------- 71 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL--------- 71 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---------
Confidence 57889999999999999999999999999988999999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHH---HHHHhcCc---hhHH--HHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhH
Q psy4758 186 NTIGLWGSAAAL---VGLSFVGD---NLVG--AITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASIL 257 (318)
Q Consensus 186 ~~~~~~~~~~~~---~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 257 (318)
..+.....+.. ..+...+. .... .+..+..+.+. ....+....+..+.. ++++...|......++|..+
T Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 148 (396)
T TIGR00882 72 -LWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVF-SAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWAL 148 (396)
T ss_pred -HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHhh-hhcccccchhhhhcccHHHH
Confidence 22222222211 11111111 1111 11112222222 222333333333322 22455677888888999999
Q ss_pred hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 258 GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 258 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+|.++|.+.+. +|+..|++.+++.++..++.+...
T Consensus 149 g~~~~g~l~~~-----~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 149 CASIAGILFSI-----DPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHHHHhhhhcc-----CchHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988653 688889888777776665554433
No 142
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=6.2e-14 Score=120.75 Aligned_cols=175 Identities=18% Similarity=0.186 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec-----hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS-----NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 181 (318)
+.+...++..++...+......++|.+.++ +|.+..+ .+...+...+...++.++.|+++||+|||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----- 87 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML----- 87 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH-----
Confidence 345556667777777777888899999987 8888655 37788888899999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhh
Q psy4758 182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 182 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~ 260 (318)
..+.++..++..+....++.+...+..++.+.+ ... .+.......+..| ++|+++.++.+...++|..++|.
T Consensus 88 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 88 -----LRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred -----HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 555556666665555544443333333444433 222 2333334444445 45999999999999999999999
Q ss_pred hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+.+.+.+. .+|+..+++.+++.++..+......+
T Consensus 161 ~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 161 AGGLLADS----YGLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999887 68999998888877766655544433
No 143
>PRK11043 putative transporter; Provisional
Probab=99.56 E-value=1e-13 Score=119.14 Aligned_cols=169 Identities=18% Similarity=0.147 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHhhhhhh--hhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSY--INSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW 191 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~--l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~ 191 (318)
...+.....+.+...+.|.+ +++++|.++.+.++..+...++..++.++.|+++||+|||+.+ ..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~ 79 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL----------LAGLS 79 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH----------HHHHH
Confidence 33333444444555555544 4455899999999999999999999999999999999999976 55666
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 192 GSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
+..++.....+.++........++.+.+.... .+.......+..|++ ++...+..+....++..++|.+.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 156 (401)
T PRK11043 80 LFALGSLGMLWVESAAQLLVLRFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-- 156 (401)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 66666666666555443444344444433222 223334445556555 88888888888999999999999999887
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 271 SVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+|+..|++.+++.++..+.....+
T Consensus 157 --~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 157 --FGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHcC
Confidence 6899999888877776665554444
No 144
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.56 E-value=2e-14 Score=122.29 Aligned_cols=166 Identities=18% Similarity=0.115 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH
Q psy4758 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA 195 (318)
Q Consensus 116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~ 195 (318)
+++.......+....|.+.+ ++|.++.+.+++.+...++..++.++.|+++||+|+|+.+ ..+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~ 72 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVE-EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL----------PIGLILCAI 72 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHH-HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh----------HHHHHHHHH
Confidence 34455555666666776554 4899999999999999999999999999999999999987 667777777
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhh-hhheeeccCCCcc
Q psy4758 196 ALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPL-FVGFIVTDNTSVS 273 (318)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~-~~g~l~~~~~~~~ 273 (318)
+.++....++.+...+..++.+.+ .+...+....+..+..|++ |+++.++.+...++|..++|. +.+.+.+. .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~ 147 (379)
T TIGR00881 73 VNLFFGFSTSLWVMAALWALNGIF-QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL----Y 147 (379)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhh-ccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc----C
Confidence 777777666544344444444443 3344556666666777765 999999999999999999994 55555555 6
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+|+..|++.+++.++..+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHheee
Confidence 788888887776666555544443
No 145
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.56 E-value=6.9e-14 Score=118.07 Aligned_cols=163 Identities=15% Similarity=-0.019 Sum_probs=114.8
Q ss_pred HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
...+..+...+|.+.+| +|.|+.+.|++.+...++..++.+..|+++||+|||+.+ .........+...
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~ 72 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL----------FGSLATFAAAAGR 72 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH----------HHHHHHHHHHHHH
Confidence 45566677778887776 999999999999999999999999999999999988754 2222222222222
Q ss_pred HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHH
Q psy4758 200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIF 279 (318)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 279 (318)
....++...+....++.+.+... ..+......+..++++|++++++.+....+|..+++.+.+.+.+. .+|+..|
T Consensus 73 ~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~----~gWr~~f 147 (368)
T TIGR00903 73 LLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA----GGLQLLI 147 (368)
T ss_pred HHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cchHHHH
Confidence 22213333355555555555443 333333334444455599999999999999999999999999887 7999999
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q psy4758 280 LIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~ 298 (318)
++.+++.++..++.....+
T Consensus 148 ~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 148 IPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9888877766655554443
No 146
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.55 E-value=1.1e-13 Score=118.98 Aligned_cols=177 Identities=13% Similarity=0.063 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI 188 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 188 (318)
++...+.+++............| .+++++|++..+.++..+...++..++.++.|++.||+|+|+.+ ..
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----------~~ 78 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI----------AG 78 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH----------HH
Confidence 44445555555555556666666 55566999999999999999999999999999999999999976 66
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
+.++..++.....+.++...+....++.+.+.... .+....+..+.+|++ |++++++.+....+|..+++.+.+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777777777777666554555555566555443 344445667777765 9999999999999999999999998864
Q ss_pred cC--CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 268 DN--TSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 268 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.. .+..+|+..|++.++..++..++..+..
T Consensus 158 ~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~ 189 (412)
T TIGR02332 158 LDGLMALKGWQWLFLLEGFPSVILGVMTWFWL 189 (412)
T ss_pred CCCCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence 31 1225899999988777666555444433
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.55 E-value=1.3e-13 Score=118.33 Aligned_cols=162 Identities=10% Similarity=0.013 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
|.+....+..++...+.+....++|.++++ +|.++.+.+...+...++..++.++.|++.||+|||+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l---------- 81 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM---------- 81 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------
Confidence 455666677777777777777888999876 899999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHH---hcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHH-hHhhhh
Q psy4758 187 TIGLWGSAAALVGLS---FVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIAS-ILGPLF 261 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~~~~~ 261 (318)
..+..+..++..... ...++.. +.....+.+.+................++++|++++|+.+...++|. .++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555443322 2222222 33333333433322222222223334456669999999999999996 589999
Q ss_pred hheeeccCCCccchHHHHHHHH
Q psy4758 262 VGFIVTDNTSVSQWQTIFLIAA 283 (318)
Q Consensus 262 ~g~l~~~~~~~~~~~~~~~~~~ 283 (318)
.+.+.+. .+++..++...
T Consensus 162 ~~~l~~~----~g~~~~~~~~~ 179 (402)
T TIGR00897 162 SSYAIPA----FGEMNTLWSAL 179 (402)
T ss_pred HHhcccc----cchHHHHHHHH
Confidence 9998887 45444444333
No 148
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.55 E-value=2.1e-13 Score=116.31 Aligned_cols=152 Identities=15% Similarity=0.072 Sum_probs=118.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
++.++.+.+..++...........+|.+.++ +|.|..++|+..+...++..++.++.|+++||+|+|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~--------- 74 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY--------- 74 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---------
Confidence 3557778888888888888889999999988 899999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 186 NTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
..+.++..++.......++...+.+..++.+.+.....+........+..+++|+++++..+...++|..+||.+.+.+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 75 -YLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred -HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5666777777766666665444444445555544433322233334444555699999999999999999999999998
Q ss_pred ecc
Q psy4758 266 VTD 268 (318)
Q Consensus 266 ~~~ 268 (318)
.+.
T Consensus 154 ~~~ 156 (381)
T PRK03633 154 STE 156 (381)
T ss_pred ccc
Confidence 775
No 149
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=1e-13 Score=118.99 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=119.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
++++..+.+..+....+.......+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l--------- 84 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV--------- 84 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH---------
Confidence 46677788888888888888889999998887999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHH---HhcCch----h-HHHHHHHHHHHHHhhhccccccccccccC-ccchhhHHHHHHHHHHHHHh
Q psy4758 186 NTIGLWGSAAALVGL---SFVGDN----L-VGAITCLTLAIAINAGTYTGFLSNHLDLS-PNFAGTLMGFTNGCANIASI 256 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~---~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~ 256 (318)
..+.++.+++.... ...++. . .+.+..++.+.+... ..+.......+.. +++|+++.++.....++|..
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 162 (399)
T PRK05122 85 -VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL-AGTGSILWGIGRVGALHTGRVISWNGIATYGALA 162 (399)
T ss_pred -HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh-hcchHHHHHHhhcChhhhccchhhhhhhhhHHHH
Confidence 44544444332222 222211 1 123333444444333 3333344444444 45599999999888899999
Q ss_pred HhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758 257 LGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF 287 (318)
Q Consensus 257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 287 (318)
++|.+++.+.+. .+|+..+.+..++.+
T Consensus 163 ~g~~l~~~l~~~----~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 163 IGAPLGVLLYHW----GGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHHHHHHc----ccHHHHHHHHHHHHH
Confidence 999999999887 678877766555443
No 150
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.55 E-value=3.3e-13 Score=113.72 Aligned_cols=281 Identities=15% Similarity=0.119 Sum_probs=162.4
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCCCChh-
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVS--GAVAIVWAAAWCYIGANSPAQHPFISLE- 77 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (318)
+..|+|++||+++.|+..++..+|.++++++++++. . +|||+-+.+. ...+...+++..+++|..++.--..+++
T Consensus 139 I~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~ 216 (511)
T TIGR00806 139 IFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-LGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLED 216 (511)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccc
Confidence 357999999999999999999999999999999954 4 8999876543 3344455566777888544311000000
Q ss_pred -H---hhhhhhccCccc-ccc---c--------cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce
Q psy4758 78 -E---RIYIETSLVHSS-TVS---S--------SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD 141 (318)
Q Consensus 78 -~---~~~~~~~~~~~~-~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~ 141 (318)
+ ..+.++...++. +.. + .-...+++..+||.++...+-+.+...+++-+..|.....++..+-+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~ 296 (511)
T TIGR00806 217 VRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESL 296 (511)
T ss_pred cccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCc
Confidence 0 000000000000 000 0 01123344567888888888888888888888888888777643322
Q ss_pred eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHh
Q psy4758 142 IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAIN 221 (318)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (318)
+..-|..-+...+.+.+.++..|++-.++.+...+ .+.+..++.+..++++...++.+...+..+++...+.
T Consensus 297 ~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l--------~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~ 368 (511)
T TIGR00806 297 NKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKL--------LIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQ 368 (511)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHH--------HHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHH
Confidence 23556666677777888888889886655332222 1233334444445555555554434444444444444
Q ss_pred hhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhh----heeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758 222 AGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFV----GFIVTDNTSVSQWQTIFLIAAAIFFFGNL 291 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (318)
........-+...+..+..|...|+.+++.-+-..+-..+. |.-.|....-.-|..-|.+.+.+.++..+
T Consensus 369 flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 369 FLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 44444444444455555579999998887777666655543 12111111112344456666655555544
No 151
>PRK12382 putative transporter; Provisional
Probab=99.54 E-value=1.6e-13 Score=117.57 Aligned_cols=164 Identities=16% Similarity=0.141 Sum_probs=113.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
++.++...+..+............+|.++++++|.|+.+.|+..+...+...+++++.|+++||+|||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l--------- 84 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA--------- 84 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH---------
Confidence 45566666667777777777778889888777999999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHH---HHHhcC----chhH-HHHHHHHHHHHHhhhccccccccccccC-ccchhhHHHHHHHHHHHHHh
Q psy4758 186 NTIGLWGSAAALV---GLSFVG----DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLS-PNFAGTLMGFTNGCANIASI 256 (318)
Q Consensus 186 ~~~~~~~~~~~~~---~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~ 256 (318)
..+.+...++.+ .....+ .+.. +.+..++.+.+.... .+.......+.. +++|++++++.....+.+..
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 85 -LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQL-LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA 162 (392)
T ss_pred -HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence 444443333222 111111 1111 333334444443332 233333333444 45599999999998999999
Q ss_pred HhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 257 LGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
++|.+.+.+.+. .+|+..+.+..+
T Consensus 163 ~g~~~~~~l~~~----~g~~~~~~~~~~ 186 (392)
T PRK12382 163 AGAPLGLLLHSH----FGFAALALTTMV 186 (392)
T ss_pred HHHHHHHHHHhc----cChHHHHHHHHH
Confidence 999999998887 678766554433
No 152
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.54 E-value=1.1e-13 Score=120.22 Aligned_cols=176 Identities=16% Similarity=0.131 Sum_probs=117.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHH
Q psy4758 105 TSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKM 184 (318)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~ 184 (318)
+++.++...+.+.........+....| ++++ .|+++.+.++..+...++..++.++.|+++||+|+|+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~-------- 94 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL-------- 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh--------
Confidence 334444444544444444444455556 4555 599999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHhcC---chhH-HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhh
Q psy4758 185 WNTIGLWGSAAALVGLSFVG---DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~ 259 (318)
..+.++.+++.+.....+ ++.. ..+..++.+.+.+. ..+.......+..|+ +|++++|+.+...++++.++|
T Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 171 (438)
T TIGR00712 95 --PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGM-GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP 171 (438)
T ss_pred --HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhc-chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence 556666666655554432 1221 22223333333222 333333444566655 599999999999999999999
Q ss_pred hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
.+.+...+.. .+|+..|++.+++.++..+.....
T Consensus 172 ~l~~~~~~~~---~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 172 LLVLLGMAWF---NDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8877655432 589999998888777655444443
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.54 E-value=1.3e-13 Score=119.36 Aligned_cols=162 Identities=11% Similarity=0.190 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
.+....+.++.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+ .
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l----------~ 87 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLIKAD-LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM----------M 87 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------H
Confidence 34455555555555555665666655544 999999999999999999999999999999999999976 6
Q ss_pred HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
.+.++..++.....+.++...+.+..++.+.+... ..+....+..|..|++ |+++.++......+|..+++.+.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 88 WSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAG-EYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 67777777777766666554454555555554443 3444445555666655 999999999999999999999998887
Q ss_pred ccCCCccchHHHHHHHHHH
Q psy4758 267 TDNTSVSQWQTIFLIAAAI 285 (318)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~ 285 (318)
+. .+|+..|++....
T Consensus 167 ~~----~~w~~~f~i~~~~ 181 (426)
T PRK12307 167 EA----YGWRAAFFVGLLP 181 (426)
T ss_pred cc----CCHHHHHHHHHHH
Confidence 77 7899998875433
No 154
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=1.4e-13 Score=117.20 Aligned_cols=170 Identities=10% Similarity=0.121 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHH
Q psy4758 113 LITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWG 192 (318)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~ 192 (318)
.+.+++...+.......+|.|+++++|.|+.+.|+..+...+...+..++.|+++||+|+||.+ ...+...
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---------~~~~~~~ 73 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL---------ILFCCLL 73 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH---------HHHHHHH
Confidence 3456777777888889999999887999999999999999999999999999999999998854 1233444
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH--HHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 193 SAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL--MGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
..++..+....++.....+...+.+.+. ....+.......+..|++ |+.+ .+......++|..++|.+.+.+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~- 151 (375)
T TIGR00899 74 AALACLLFAWNRNYFLLLVLGVLLSSFA-STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG- 151 (375)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-
Confidence 4444445555544432333333333322 223344444455555544 5543 5777788899999999999999887
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 270 TSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
.+|+..|++.+.+.++..+.....
T Consensus 152 ---~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 152 ---FGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999888777666655543
No 155
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.53 E-value=2.8e-13 Score=115.90 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=120.3
Q ss_pred HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758 124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV 203 (318)
Q Consensus 124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 203 (318)
......+|.+.++ +|.|..+.++..+...++..++.++.|+++||+|+|+.+ ..+..+.+++.+...+.
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l----------~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV----------AISLLLIAVGALMRELY 94 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHC
Confidence 4556677777766 999999999999999999999999999999999999987 78888889999888888
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758 204 GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA 283 (318)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 283 (318)
++...+....++.+.+... ..+.......+.+|++|+.++|+.......|..+++.+.+.+.++. .+|+..+...+
T Consensus 95 ~~~~~ll~~r~l~Gig~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---~~w~~~~~~~~ 170 (393)
T PRK09705 95 PQSALLLSSALLGGVGIGI-IQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---ETWYQTLAWWA 170 (393)
T ss_pred cchHHHHHHHHHHHhHHHH-HhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHH
Confidence 7766555555555655544 3344455666777877999999999999999999999999888763 37888876655
Q ss_pred HHHHHHH
Q psy4758 284 AIFFFGN 290 (318)
Q Consensus 284 ~~~~~~~ 290 (318)
+..++..
T Consensus 171 ~~~~~~~ 177 (393)
T PRK09705 171 LPAVVAL 177 (393)
T ss_pred HHHHHHH
Confidence 5544433
No 156
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.53 E-value=2.4e-13 Score=120.10 Aligned_cols=162 Identities=12% Similarity=0.207 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
.+....+..+.............|.+.++ +|.++.+.+...+...++..++.++.|+++||+|||+.+ .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~ 89 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE-FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM----------V 89 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence 34455555555566666666667766555 899999999999999999999999999999999999876 5
Q ss_pred HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
.+.++.+++.+...+.++.+...+..++.+.+... ..+....+..+..|++ |+++.++.+...++|..++|.+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 90 ISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAG-EYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56666666666666655544344444444444333 3344444555666655 999999999999999999999999998
Q ss_pred ccCCCccchHHHHHHHHHH
Q psy4758 267 TDNTSVSQWQTIFLIAAAI 285 (318)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~ 285 (318)
+. .+|+..|.+....
T Consensus 169 ~~----~~w~~~f~~~~~~ 183 (496)
T PRK03893 169 PV----WGWRALFFIGILP 183 (496)
T ss_pred cc----CCHHHHHHHHHHH
Confidence 87 7899888764433
No 157
>KOG3626|consensus
Probab=99.52 E-value=1.6e-12 Score=114.64 Aligned_cols=173 Identities=10% Similarity=0.140 Sum_probs=125.9
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CC----------------CchHHHHHHHHHHHHHHHHHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PW----------------GWPSIFYVSGAVAIVWAAAWCY 62 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~----------------gWr~~f~~~~~~~~~~~~~~~~ 62 (318)
|-|...+++-...+|++.+...+|+++|.++++.+... +. .|..-|++.+.+.++.++..++
T Consensus 262 iDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 262 IDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred ccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677788899999999999999999999999988762 01 3777888888888888777666
Q ss_pred HhcCCCCCCCCCChhHhhhhhhccC--ccccc----cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758 63 IGANSPAQHPFISLEERIYIETSLV--HSSTV----SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINS 136 (318)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 136 (318)
+-++.|+..++...++.+..+++.+ ++++. -++-+...+++++||.+....+...+....+.++.+++|.|+++
T Consensus 342 fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~ 421 (735)
T KOG3626|consen 342 FPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLET 421 (735)
T ss_pred CcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHH
Confidence 5444454333211111111111111 00000 02233456788999999999999999999999999999999999
Q ss_pred hhcceeechhhhchHHHHH-HHHHHHHHHHhHHHHhhh
Q psy4758 137 VLQFDIKSNGFLSAAPYLA-QWILILVFSWLADYIVAK 173 (318)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~ 173 (318)
++|.++..+..+.....+. ..+|.+++|++..|+..+
T Consensus 422 Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 422 QFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9999999999988776654 678888999999987543
No 158
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.52 E-value=5.1e-13 Score=114.37 Aligned_cols=178 Identities=11% Similarity=0.100 Sum_probs=117.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhhcCcchHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAKQILSPTVSRKM 184 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~ 184 (318)
|.+.+.+.+..++...+.......+|.|+.+++|.|+.+.|+..+...+ +..++.+.+++ .||+|+||.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~------- 85 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLI------- 85 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHH-------
Confidence 5666777778888888888889999999988899999999998766655 45555555566 99999998541
Q ss_pred HHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h--hhHHHHHHHHHHHHHhHhhhh
Q psy4758 185 WNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A--GTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~~~~~~~g~~~~~~~ 261 (318)
..+.+...+......+.++...+.+.....+.. .....+.......+..+++ | +...++.+...++|..++|.+
T Consensus 86 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i 162 (393)
T PRK15011 86 --VFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL 162 (393)
T ss_pred --HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence 233334344444444444333222222222222 2333444444444544332 3 334577788889999999999
Q ss_pred hheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 262 VGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
++.+.+. .+|+..|++.++..++..+......+
T Consensus 163 ~~~l~~~----~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 163 AYALAMG----FSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHHh----cChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999887 79999999888777666655544333
No 159
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.51 E-value=3.7e-13 Score=117.32 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=101.3
Q ss_pred HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy4758 127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-- 204 (318)
Q Consensus 127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-- 204 (318)
...+| ++.++ |+++.+.++..+...++..++.++.|+++||+|+|+.+ ..+.++.+++.+.+.+.+
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l----------~~~~~~~~i~~~~~~~~~~~ 116 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWA 116 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH----------HHHHHHHHHHHHHHHhhhcc
Confidence 34555 45565 99999999999999999999999999999999999976 566666666665555432
Q ss_pred -chhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhH-hhhhhheeeccCCCccchHHHHH
Q psy4758 205 -DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASIL-GPLFVGFIVTDNTSVSQWQTIFL 280 (318)
Q Consensus 205 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~ 280 (318)
++.. .....++.+.+.+. ..+.......+..|++ |++++|+.+...++|+.+ +|.+...+... .+|+..|+
T Consensus 117 ~~~~~~~~~~~~l~gi~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~gw~~~f~ 191 (452)
T PRK11273 117 TSSIAVMFVLLFLCGWFQGM-GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF----NDWHAALY 191 (452)
T ss_pred cccHHHHHHHHHHHHHHHhc-cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh----ccHHHHHH
Confidence 1222 33333444444333 3333333344555544 999999999999988754 44433333222 48999998
Q ss_pred HHHHHHHHHHHHHHhh
Q psy4758 281 IAAAIFFFGNLIFLIF 296 (318)
Q Consensus 281 ~~~~~~~~~~~~~~~~ 296 (318)
+.+++.++..++..+.
T Consensus 192 i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 192 MPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8877766655444443
No 160
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.51 E-value=1.5e-13 Score=117.06 Aligned_cols=158 Identities=19% Similarity=0.173 Sum_probs=119.8
Q ss_pred HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758 123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF 202 (318)
Q Consensus 123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 202 (318)
.......+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+ ..+.++..++......
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI----------LGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH----------HHHHHHHHHHHHHHHH
Confidence 34455777888877 899999999999999999999999999999999999876 6667777777776666
Q ss_pred cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758 203 VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI 281 (318)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (318)
.++........++.+.+... ..+.......+..|++ |+++.++.+....+|..++|.+.+.+.+. .+|+..|++
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~~~ 150 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAA-ASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW----FSWHAIFWV 150 (377)
T ss_pred HccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cChHHHHHH
Confidence 65544344444444444333 3344445556666655 99999999999999999999999999887 689999988
Q ss_pred HHHHHHHHHHHHHhh
Q psy4758 282 AAAIFFFGNLIFLIF 296 (318)
Q Consensus 282 ~~~~~~~~~~~~~~~ 296 (318)
.+.+.++..+.....
T Consensus 151 ~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 151 LALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHh
Confidence 877776665554443
No 161
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.50 E-value=3.3e-13 Score=115.37 Aligned_cols=171 Identities=16% Similarity=0.140 Sum_probs=120.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
+|+++.+++..++...+........+.+.++ ++.++.+.++..+...+...+..++.|+++||+|||+.+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl--------- 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM--------- 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh---------
Confidence 4567777777777777666666666666655 888888899999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 186 NTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
..+..+..++.+.+....+. ....++.+.+ .+...+...++..|..|++ |+++.|+.+...+++..+||.++|.
T Consensus 72 -~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~-~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 72 -FIANGIKLLGCLLMLFGIHP---LLAYGLVGIG-AAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555544444443332221 2223334443 3445566666677777665 9999999999999999999999999
Q ss_pred eeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+.+. . |...+.+.+.+.+++.+....+
T Consensus 147 l~~~----~-~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 147 LADP----H-AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HHHH----H-HHHHHHHHHHHHHHHHHHHhcC
Confidence 9886 2 6666666555544444333333
No 162
>TIGR00895 2A0115 benzoate transport.
Probab=99.50 E-value=2.2e-13 Score=116.72 Aligned_cols=165 Identities=16% Similarity=0.202 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS 193 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 193 (318)
+..+...........+.|.+.++ +|.++.+.+++.+...++..++.++.|+++||+|||+.+ ..+.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~ 92 (398)
T TIGR00895 24 LIMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL----------LWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH----------HHHHHHH
Confidence 33444444445555666766665 899999999999999999999999999999999999876 5566666
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758 194 AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSV 272 (318)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 272 (318)
.++..+....++.....+..++.+.+ .+...+....+..|..|++ |+++.++.+....+|..++|.+.+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---- 167 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLG-LGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV---- 167 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcc-cccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc----
Confidence 66666666555544333333444433 3344555666677777765 99999999999999999999999999887
Q ss_pred cchHHHHHHHHHHHHHHHHHHH
Q psy4758 273 SQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+|+..+++.+++.++..++..
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHH
Confidence 6788888877655554444433
No 163
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=3e-13 Score=117.86 Aligned_cols=157 Identities=9% Similarity=0.040 Sum_probs=114.8
Q ss_pred HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
.+..++|.+.++ +|.+..+.++..+...+...++.++.|+++||+|+|+.+ ..+.++..++.+...+.+
T Consensus 37 ~~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~ 105 (455)
T TIGR00892 37 AVTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV----------IAGGLLASLGMILASFSS 105 (455)
T ss_pred chhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH----------HhhHHHHHHHHHHHHHhh
Confidence 345567776666 899999999999988888899999999999999999876 556666666666666655
Q ss_pred chhHHHHHH-HHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758 205 DNLVGAITC-LTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA 283 (318)
Q Consensus 205 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 283 (318)
+........ ++.+.+..... +.......+.++++|+++.|+.+....+|..++|.+.+.+.+. .+|+..|++.+
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~----~gwr~~f~~~~ 180 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNF-QPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES----FGWRGSFLILG 180 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhh-hHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH----hChHHHHHHHH
Confidence 443222222 33333333222 2333455567777799999999999999999999999999887 78999999998
Q ss_pred HHHHHHHHHHHhhc
Q psy4758 284 AIFFFGNLIFLIFG 297 (318)
Q Consensus 284 ~~~~~~~~~~~~~~ 297 (318)
++.+++.+...+.+
T Consensus 181 ~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 181 GLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHHHHhC
Confidence 88776655544443
No 164
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.50 E-value=5.7e-13 Score=114.20 Aligned_cols=167 Identities=12% Similarity=0.048 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW 191 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~ 191 (318)
......+..+........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+.+ ..+..
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~----------~~~~~ 81 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI----------LVGMS 81 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHHH
Confidence 3334444444444555566777666 999999999999999999999999999999999999976 55666
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758 192 GSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNT 270 (318)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 270 (318)
+..++.......++.....+..++.+.+... ..+.......+..++ +++.+.+..+....++..++|.+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 158 (394)
T PRK11652 82 IFILGTLVALFAHSLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-- 158 (394)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 6666666665555444343444444443322 223333344455554 489999999999999999999999998877
Q ss_pred CccchHHHHHHHHHHHHHHHHHHH
Q psy4758 271 SVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+|+..|++.++..++..+...
T Consensus 159 --~g~~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK11652 159 --FGWRACYLFLLLLGAGVTFSMA 180 (394)
T ss_pred --cChHHHHHHHHHHHHHHHHHHH
Confidence 6899999887766655444433
No 165
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.49 E-value=6.2e-13 Score=114.45 Aligned_cols=158 Identities=12% Similarity=0.046 Sum_probs=113.7
Q ss_pred HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758 123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF 202 (318)
Q Consensus 123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 202 (318)
...+...+|.+.++ +|.++.+.+...+...++..++.++.|+++||+|||+.+ ..+..+..++......
T Consensus 29 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 29 NDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM----------LAGVAFFILTCLAILL 97 (406)
T ss_pred hhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHHHHHHHHH
Confidence 34444556665555 899999999999999999999999999999999999976 5566666666666666
Q ss_pred cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758 203 VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI 281 (318)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (318)
.++........++.+.+... ..+.......|..|++ |+++.++......++..++|.+.+.+.+. .+|+..+++
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----~~w~~~~~~ 172 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCF-IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV----LPWRGMFVL 172 (406)
T ss_pred HccHHHHHHHHHHHHhHhhh-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCccHHHHH
Confidence 65544333333444433322 2233444455666665 88889998888889999999999998887 689999988
Q ss_pred HHHHHHHHHHHHHhh
Q psy4758 282 AAAIFFFGNLIFLIF 296 (318)
Q Consensus 282 ~~~~~~~~~~~~~~~ 296 (318)
.+++.+++.+.....
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 173 FAALAALSFFGLWRA 187 (406)
T ss_pred HHHHHHHHHHHHHHh
Confidence 887777666554433
No 166
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.49 E-value=8.7e-13 Score=113.53 Aligned_cols=153 Identities=16% Similarity=0.092 Sum_probs=115.6
Q ss_pred HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q psy4758 127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN 206 (318)
Q Consensus 127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 206 (318)
..-+|..- +.+|.+..+.+...+...++..++.++.|+++||+|||+.+ ..+..+..++.+.....++.
T Consensus 36 ~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----------~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 36 QPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL----------ITGALIFTLACAATLFTTSM 104 (413)
T ss_pred ccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH----------HHHHHHHHHHHHHHHHcCCH
Confidence 33444443 44899999999999999999999999999999999999976 56666777777777766665
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHH
Q psy4758 207 LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAI 285 (318)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 285 (318)
..+.+..++.+.+... ..+.......|.+|++ +++++++.+...+++..++|.+++.+.+. .+|+..|++.++.
T Consensus 105 ~~l~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~----~gw~~~f~~~~~~ 179 (413)
T PRK15403 105 TQFLIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF----VHWKVLFAIIAVM 179 (413)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 5455555555554432 2333345566777765 89999999999999999999999998877 6899999998887
Q ss_pred HHHHHHHHHh
Q psy4758 286 FFFGNLIFLI 295 (318)
Q Consensus 286 ~~~~~~~~~~ 295 (318)
.+++.+....
T Consensus 180 ~~i~~~~~~~ 189 (413)
T PRK15403 180 GLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHH
Confidence 7776655443
No 167
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.48 E-value=5.6e-13 Score=120.56 Aligned_cols=160 Identities=18% Similarity=0.115 Sum_probs=115.6
Q ss_pred HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q psy4758 126 LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD 205 (318)
Q Consensus 126 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 205 (318)
+...+|.+..+ +|.+..+.+++.+...++.+++.+++|+++||+|||+.+ .+++++..++.++..+.++
T Consensus 186 is~ilp~i~~~-~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l----------ii~lil~~i~~ll~afa~s 254 (742)
T TIGR01299 186 VGFVLPSAEKD-LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL----------LICLSVNGFFAFFSSFVQG 254 (742)
T ss_pred HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHHhh
Confidence 44455655554 899999999999999999999999999999999999976 5566666666666666655
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC---------Cccch
Q psy4758 206 NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT---------SVSQW 275 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~---------~~~~~ 275 (318)
...+.+..++.+++.++. .+....+..|..|.+ |+..+++.+....+|.++++.++..+....+ ...+|
T Consensus 255 ~~~llv~R~l~G~g~g~~-~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW 333 (742)
T TIGR01299 255 YGFFLFCRLLSGFGIGGA-IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW 333 (742)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence 444555555566555443 466666777777776 9999999999999999999887655543211 11468
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q psy4758 276 QTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+..+++.++..++.++...+++
T Consensus 334 R~l~~i~~lp~ll~ll~~~~lP 355 (742)
T TIGR01299 334 RVFVIVCAFPCVFAIGALTFMP 355 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 8888887776666655554443
No 168
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.47 E-value=5e-13 Score=114.26 Aligned_cols=181 Identities=12% Similarity=0.085 Sum_probs=122.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
+|.++...+.....+...+......+.+-++++|+|+.|.+++.+...+...+..+..|++.||+|.|+.+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~--------- 103 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT--------- 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH---------
Confidence 35666666666666666666666666666646999999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHhc-----CchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhh
Q psy4758 186 NTIGLWGSAAALVGLSFV-----GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~ 259 (318)
..+.++..+..+...+. ++...+.+..++.+.+ +...+.......+.+|++ ||++.|+....+++|..+++
T Consensus 104 -~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 104 -VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred -HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 55666666666666654 3333344445555554 334455555566667765 99999999777777776655
Q ss_pred hhhheee-----ccC---------CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 260 LFVGFIV-----TDN---------TSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 260 ~~~g~l~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.+...+. +.. ++..+++.+.++.....++..++.++..+
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5544322 111 11245777777777777766666665533
No 169
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.46 E-value=2e-12 Score=110.92 Aligned_cols=173 Identities=13% Similarity=0.109 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI 188 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 188 (318)
++.++...+.............|.+. +++|.++.+.|++.+...++..++++..|++.||+|+|+.+ ..
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~-~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~----------~~ 73 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQ-QAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI----------LL 73 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HH
Confidence 44555555555655555567777664 45999999999999999999999999999999999999977 66
Q ss_pred HHHHHHHHHHHHHhc---CchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 189 GLWGSAAALVGLSFV---GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
+.++.+++..++... ++........++.+.+.+. ..+....+..+..|++ +++..++.+...++|..++|.+.+.
T Consensus 74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGF-LETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHH-HHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777766665332 2222233444444554443 3333344444455554 9999999999999999999999887
Q ss_pred eeccCC----------------------CccchHHHHHHHHHHHHHHHHHH
Q psy4758 265 IVTDNT----------------------SVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 265 l~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
+..... +..+|+.+|...+++.++..++.
T Consensus 153 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 153 LILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 753310 11358889988877666554443
No 170
>PTZ00207 hypothetical protein; Provisional
Probab=99.46 E-value=5.6e-12 Score=110.92 Aligned_cols=289 Identities=10% Similarity=0.036 Sum_probs=185.8
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CCCh
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-----FISL 76 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 76 (318)
.+||| ++||++.|+..++.++|.++.+.+...+.. .+|+..|++.+++++++.++...++++.|.+.. +.++
T Consensus 146 ~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~ 222 (591)
T PTZ00207 146 LSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDE 222 (591)
T ss_pred HHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCH
Confidence 47886 789999999999999999865555544444 469999999999999988888888877653221 1122
Q ss_pred hHhhhhhh----------------------------------------------------cc------------------
Q psy4758 77 EERIYIET----------------------------------------------------SL------------------ 86 (318)
Q Consensus 77 ~~~~~~~~----------------------------------------------------~~------------------ 86 (318)
+++..... ..
T Consensus 223 ~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~ 302 (591)
T PTZ00207 223 EEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDG 302 (591)
T ss_pred HHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 22210000 00
Q ss_pred ---C-c-c--c----------------------c-ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758 87 ---V-H-S--S----------------------T-VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINS 136 (318)
Q Consensus 87 ---~-~-~--~----------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 136 (318)
+ + + + + ..+....++.+.+++..+|++++.+++.......+...+.++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s 382 (591)
T PTZ00207 303 KRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA 382 (591)
T ss_pred CCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH
Confidence 0 0 0 0 0 000011256667778899999999999988888888888888887
Q ss_pred hhcceeec--hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHH
Q psy4758 137 VLQFDIKS--NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCL 214 (318)
Q Consensus 137 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (318)
.-|.+... ...+.+..++.+.+|.+..|.+.....+|+.- ....|-..+.+..+ +.++.+++....+...+.+..+
T Consensus 383 l~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~-~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~ 460 (591)
T PTZ00207 383 LAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE-DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYF 460 (591)
T ss_pred hcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc-cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHH
Confidence 32763322 33378889999999999999998444444410 00012223344444 4444444443333122444444
Q ss_pred HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHh-hhhhheeeccCC---------CccchHHHHHHHHH
Q psy4758 215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILG-PLFVGFIVTDNT---------SVSQWQTIFLIAAA 284 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~-~~~~g~l~~~~~---------~~~~~~~~~~~~~~ 284 (318)
+++.+ .+..++.......|++.++-|+-+-+.....-+|+.+- -.+.|.++|+.. +..=++..|++.++
T Consensus 461 lvg~~-~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~ 539 (591)
T PTZ00207 461 IAAFA-NGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLG 539 (591)
T ss_pred HHHHH-hhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHH
Confidence 44444 55577778888889998668888888777777777655 678888887642 11347889999999
Q ss_pred HHHHHHHHHHhh
Q psy4758 285 IFFFGNLIFLIF 296 (318)
Q Consensus 285 ~~~~~~~~~~~~ 296 (318)
+++++.+....+
T Consensus 540 ~~~~g~~~s~~l 551 (591)
T PTZ00207 540 LSFLAFITSTYV 551 (591)
T ss_pred HHHHHHHHHhhe
Confidence 988888776654
No 171
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=1e-12 Score=110.57 Aligned_cols=168 Identities=19% Similarity=0.294 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
...+..+.............|.+.++ .|.++.+.+...+...++..++.++.|+++||+|||+.+ ..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~----------~~~~ 71 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL----------LLGL 71 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh----------HHHH
Confidence 44556667777777888888998877 799999999999999999999999999999999999976 6677
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
.+..++.......++........++.+.+ .+...+....+..|..|++ |+++.++.+...++|..++|.+.+.+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 149 (352)
T cd06174 72 LLFALGSLLLAFASSLWLLLVGRFLLGLG-GGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES- 149 (352)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHcc-cccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 77777777666665444333333333333 3445566667777777775 99999999999999999999999999888
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 270 TSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.+|+..+.+.++..++..+...
T Consensus 150 ---~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 150 ---LGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHH
Confidence 6788888887777666655443
No 172
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.43 E-value=1.9e-12 Score=106.23 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW 191 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~ 191 (318)
....++...+..+.+..-+...+.+++|+|+.|.+++.++..+.+.+.+++.|.+.||+|.|+.. ..+.+
T Consensus 18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~----------~~s~~ 87 (417)
T COG2223 18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT----------ILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH----------HHHHH
Confidence 33344444444444545555555577999999999999999999999999999999999999976 66677
Q ss_pred HHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 192 GSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
+..+..+.+.+..+++. .....+.+..+..+..........+..+|++ +|.++|+.. .+|+|..+...+...+...
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~- 165 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA- 165 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-
Confidence 76776666666655441 2222333334444555666666666777766 999999988 9999999999888888887
Q ss_pred CCccc---hHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 270 TSVSQ---WQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 270 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
.+ |+.+..+.....++..+..++..++.
T Consensus 166 ---~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 166 ---FGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred ---HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45 88888888888888777766665443
No 173
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=9.7e-13 Score=115.21 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=109.6
Q ss_pred HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758 123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF 202 (318)
Q Consensus 123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 202 (318)
-..+....|.+.++ +|.+..+.|++.+...++..++.++.|+++||+|+|+.+ ..+.++.++.......
T Consensus 45 r~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l----------~~~~~~~~~~~~~~~~ 113 (467)
T PRK09556 45 RKNFKAAQNDMIST-YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL----------PFLLILSAICMLGFGA 113 (467)
T ss_pred hcChhhhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH----------HHHHHHHHHHHHHHHH
Confidence 33445557776665 999999999999999999999999999999999999976 4444444444433332
Q ss_pred -----cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchH
Q psy4758 203 -----VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQ 276 (318)
Q Consensus 203 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 276 (318)
.++...+.+..++.+.+.+. ..+....+..+.+|++ ||+++|+.+...++|..+++.+..++.+... ..+|+
T Consensus 114 ~~~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-~~~~~ 191 (467)
T PRK09556 114 SLGSGSVSLGLMIALWALSGFFQST-GGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-DGHVI 191 (467)
T ss_pred HHhcccchHHHHHHHHHHHHHHHhc-cchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-cCcch
Confidence 23333244444444444333 3455555666777655 9999999999999999999988876655411 02577
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy4758 277 TIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~ 296 (318)
..|.+.+++.++..++.+..
T Consensus 192 ~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 192 GMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 77877676666555444444
No 174
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.41 E-value=1.8e-12 Score=108.83 Aligned_cols=186 Identities=17% Similarity=0.199 Sum_probs=146.1
Q ss_pred hhhcc-hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc----ceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcC
Q psy4758 102 AILTS-LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ----FDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQI 175 (318)
Q Consensus 102 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~ 175 (318)
..+++ |.++.+...-+.--+++|++...+..|+....+ +|++++.-+++.+...--+..+++||++|| +|+|+.
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 34554 557777788888899999999999999988777 999998888888877777888999999999 588887
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHH
Q psy4758 176 LSPTVSRKMWNTIGLWGSAAALVGLSFVG--DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGC 250 (318)
Q Consensus 176 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~ 250 (318)
+ ..+.++..++.+++...+ ....+.+.+..+..+.+. .=+.......+.+|++ |-.+.++....
T Consensus 95 I----------~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl-~K~NiS~llg~ly~~~DprrD~gFt~fY~~ 163 (498)
T COG3104 95 I----------VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGL-FKPNISSLLGELYPKDDPRRDGGFTLFYMG 163 (498)
T ss_pred H----------HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccc-ccccHHHHHHHhcCCCCcccCCCccEEEEE
Confidence 7 788899999998888774 233255555555555444 3344444555555443 77888999999
Q ss_pred HHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758 251 ANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302 (318)
Q Consensus 251 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (318)
.|+|+.++|.+.+++.+. .+|...|...++-+.++++.+...++....
T Consensus 164 iNiGsl~~p~i~~~~~~~----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 164 INIGSLIAPIITGLLAIN----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred eehHHHHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 999999999999999999 889999999999999999888877765443
No 175
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.41 E-value=4.2e-12 Score=108.31 Aligned_cols=162 Identities=16% Similarity=0.024 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI 188 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 188 (318)
.+...+.++....++.....++|.|+++ +|+|..+.|...+...+...++.++.|.++||++|+... ++. ...
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-----~~~-~~~ 78 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-----LRL-LAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-----HHH-HHH
Confidence 3445666777777777888999999988 899999999999999999999999999999999875422 111 111
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+..+..+ ......++.+...+...+.+.+... ..+....+..+ .+++|+++.|......++|..++|.+.+.+.+.
T Consensus 79 ~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~-~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~ 154 (382)
T TIGR00902 79 ASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSA-GMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM 154 (382)
T ss_pred HHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHcc-chhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1222233333233333334434333 34444444444 345689999999999999999999999999998
Q ss_pred CCCccchHHHHHHHHHH
Q psy4758 269 NTSVSQWQTIFLIAAAI 285 (318)
Q Consensus 269 ~~~~~~~~~~~~~~~~~ 285 (318)
.+|+..|.+....
T Consensus 155 ----~g~~~~f~~~~~~ 167 (382)
T TIGR00902 155 ----FDEQNILAILTAG 167 (382)
T ss_pred ----cChhHHHHHHHHH
Confidence 7899888776655
No 176
>KOG1330|consensus
Probab=99.41 E-value=6.2e-13 Score=110.15 Aligned_cols=180 Identities=15% Similarity=0.126 Sum_probs=140.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
.....+++...+...--+.+-..++..- +.++.++...|++.....+...++++++|++.||+.|++++
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~-~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~---------- 101 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQ-TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI---------- 101 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHH-HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE----------
Confidence 3445555666666666666655444443 34899999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
.++..+-.++.+...+..+.+...+.-.+.+.+-.. ..+.....+.|.+|+. |++++++.+....+|+.+|-..++.+
T Consensus 102 ~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs-~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS-YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh-hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 667777777777777774444355555666666544 5677777888888887 99999999999999999999999999
Q ss_pred eccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
.+.+ ..|++.|.+.+++.++..++..++.++.+
T Consensus 181 a~~~---~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 181 ASLT---FWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ccCc---cceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 8885 44999999999999888887776655443
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=6.6e-12 Score=107.16 Aligned_cols=162 Identities=13% Similarity=0.019 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS 193 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 193 (318)
..++....+......++|.|+++ +|.|..++|...+...+...++.++.|.++||++|++.. ++.. .+...+
T Consensus 11 ~~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~-----~~~~-~~~~~~- 82 (382)
T PRK11128 11 LSYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA-----LRLL-ALLTLL- 82 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH-----HHHH-HHHHHH-
Confidence 34666667777888899999988 899999999999999999999999999999999985321 1111 111111
Q ss_pred HHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758 194 AAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV 272 (318)
Q Consensus 194 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 272 (318)
... .+....++.+ +.+...+.+.+.. ...+...+...+. .++|+++.+......++|..+||.+++.+.++
T Consensus 83 -~~~-~~~~~~~~~~~l~i~~~l~g~~~~-~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---- 154 (382)
T PRK11128 83 -FAV-AFWFGAHSFWLLFVAIGLFNLFFS-PLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---- 154 (382)
T ss_pred -HHH-HHHHhcccHHHHHHHHHHHHHHHc-ccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH----
Confidence 111 2222222232 3333333343333 3334344444443 45588888889999999999999999999998
Q ss_pred cchHHHHHHHHHHHHHHHH
Q psy4758 273 SQWQTIFLIAAAIFFFGNL 291 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~ 291 (318)
.+|+..|++.++..++..+
T Consensus 155 ~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 155 FGEQAILWILTAGVASMLL 173 (382)
T ss_pred cChhHHHHHHHHHHHHHHH
Confidence 7899998877765544433
No 178
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.37 E-value=3.1e-12 Score=112.38 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=101.5
Q ss_pred eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh---HHHHHHHHHHH
Q psy4758 142 IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL---VGAITCLTLAI 218 (318)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 218 (318)
..+.++..+...++..++.++.|+++||+|||+.+ ..+.++..++..+.....+.. ...+..++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 139 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL----------LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGI 139 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH----------HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHh
Confidence 78999999999999999999999999999999876 555556666555554333222 24444455555
Q ss_pred HHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh---heeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 219 AINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV---GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+... ..+....+..+..|++ |+++.++.+...++|..+++.+. +...+. .+|+..|++.+...++..+...
T Consensus 140 ~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~----~~w~~~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 140 GVGI-ASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT----LGWRIPLGLQLIPAGLLFLGLF 214 (481)
T ss_pred hhhH-HHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC----ccHHHHHHHHHHHHHHHHHHHh
Confidence 4433 3444555666766655 99999999999999999999998 555455 6899999986666555554444
Q ss_pred hhc
Q psy4758 295 IFG 297 (318)
Q Consensus 295 ~~~ 297 (318)
+++
T Consensus 215 ~l~ 217 (481)
T TIGR00879 215 FLP 217 (481)
T ss_pred cCC
Confidence 443
No 179
>KOG3764|consensus
Probab=99.36 E-value=2.9e-12 Score=104.16 Aligned_cols=151 Identities=20% Similarity=0.219 Sum_probs=126.5
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA 217 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
.+-+..++|++++...+.+++.+++.|.+.||+|+|..+ .++++.+..+.+++.+..+.+...+.-.+-+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm----------~~Gl~vmf~sTilFafg~sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM----------VAGLFVMFLSTILFAFGNSYPMLFVARSLQG 170 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHhh
Confidence 445678899999999999999999999999999999877 8899999999999999888776677777777
Q ss_pred HHHhhhccccccccccccCccc--hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 218 IAINAGTYTGFLSNHLDLSPNF--AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+..... ....+...+.+|++ |++++|+.-.+-.+|-.+||.++|.++|. .|+...|.+.++++++...+.++
T Consensus 171 vgsA~~~-tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~----~Gk~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 171 VGSAFAD-TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF----AGKSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred hhHHHHH-hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh----cCCcCcHHHHHHHHHHHHHHHHh
Confidence 7765544 44444555666665 89999999999999999999999999999 78999999999999998888777
Q ss_pred hcccccCC
Q psy4758 296 FGTSEVQP 303 (318)
Q Consensus 296 ~~~~~~~~ 303 (318)
..+..+.+
T Consensus 246 vi~p~~~~ 253 (464)
T KOG3764|consen 246 VIEPTEMD 253 (464)
T ss_pred eeCccccC
Confidence 76654443
No 180
>KOG2816|consensus
Probab=99.36 E-value=1.7e-11 Score=105.05 Aligned_cols=253 Identities=13% Similarity=0.139 Sum_probs=174.1
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI 80 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
++|....++|....|+.+.....+..++|.+++.+.+. .|--.+|.+..+..++..+....++||+..+++.......+
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~ 215 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE 215 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence 46788889999999999999999999999999999998 89999999999999888888888899876543322100000
Q ss_pred hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758 81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLT-EMPSYINSVLQFDIKSNGFLSAAPYLAQWIL 159 (318)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (318)
....+...++. .+.....+..-.+|..+.+++..+........-.. ..+.|+...+++++.+.+.+.+.......++
T Consensus 216 ~~~~~~~~~~~--~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~ 293 (463)
T KOG2816|consen 216 LTPGSLDSSHV--ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIIS 293 (463)
T ss_pred cCCCcccchhh--hhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHH
Confidence 00000000000 11111111112245566655555554444433222 5578888889999999999999999999998
Q ss_pred HHHHH-HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc-ccCc
Q psy4758 160 ILVFS-WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL-DLSP 237 (318)
Q Consensus 160 ~~~~g-~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (318)
..+.. .+...++.++.+ ..++..-.+....+.+..+.+......... . ......+...+... ...+
T Consensus 294 ~l~~~~~l~~~l~~~~~i----------~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~-~~~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 294 QLLLLPLLSSILGEKRLI----------SLGLLSEFLQLLLFAFATETWMMFAAGVVV-A-LAGIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHhhhhHh----------hHHHHHHHHHHHHHHHhccchhhhHHHHHH-H-hhcchhHHHHhHHHhhccc
Confidence 88776 788888888855 778888888888888887776433322222 2 22333444444444 4455
Q ss_pred cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 238 NFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 238 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+++|++.++...+..+.+.++|.+.+.++..
T Consensus 362 ~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 362 EEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred ccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 6699999999999999999999999988654
No 181
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.36 E-value=1.5e-11 Score=105.98 Aligned_cols=182 Identities=13% Similarity=0.067 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH----HHhhhcCcchHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD----YIVAKQILSPTVSRKM 184 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~r~~ 184 (318)
...++...+...+++.....+++.|+++ +|.++...+.......+.+++..++.|+++| |+||||.+
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~-------- 76 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF-------- 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH--------
Confidence 4445556666677777888889988877 9999999999999999999999999999999 59999876
Q ss_pred HHHHHHHHHHHHHHHHHhcCchh----------------HHHHHHHHHHHHHhhhccccccccccccCccc-h--hhHHH
Q psy4758 185 WNTIGLWGSAAALVGLSFVGDNL----------------VGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A--GTLMG 245 (318)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g 245 (318)
+..+.....+++.++.+..+.. ...+..+.+.-.......+...++..|..|++ | +.+.+
T Consensus 77 -il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 77 -IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred -HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 2334555555666665543311 11111122222223333445566777877765 3 68999
Q ss_pred HHHHHHHHHHhHhhhhhhee--eccC---C----C--ccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 246 FTNGCANIASILGPLFVGFI--VTDN---T----S--VSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 246 ~~~~~~~~g~~~~~~~~g~l--~~~~---~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
+.+...++|+.+|+.+++.. .+.. . . ..+++..|++.+++.+++.+...+..+++
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 99999999999999988764 1110 0 0 12778899988888888777766655443
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.36 E-value=1.6e-11 Score=107.53 Aligned_cols=180 Identities=23% Similarity=0.171 Sum_probs=130.8
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758 103 ILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR 182 (318)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r 182 (318)
-+|||.|..+++.....+.+......-++-++.+ ..-|+...+++.....+..++.++++|.++||+.|||.+..
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~---- 80 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILIL---- 80 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH----
Confidence 4788999999999998888888777777766666 66788888998888899999999999999999999998733
Q ss_pred HHHHHHHHHHHHH---HHHHHHhcCc-hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhH
Q psy4758 183 KMWNTIGLWGSAA---ALVGLSFVGD-NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASIL 257 (318)
Q Consensus 183 ~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~ 257 (318)
+-++..+ .+.++..... +.+.++...++.........+...+...++.|++ ...+.++.+...++...+
T Consensus 81 ------~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 81 ------SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII 154 (524)
T ss_pred ------HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence 2222221 1222222222 2222333333333334556677888887877776 889999999999999999
Q ss_pred hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 258 GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 258 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
||.++|.++.. .|...+|.+.++..++.+......+
T Consensus 155 GPalgG~Lva~----~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 155 GPALGGILVAF----FGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred cchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999888 6777888888877776655544443
No 183
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.36 E-value=2.7e-11 Score=102.36 Aligned_cols=162 Identities=12% Similarity=0.153 Sum_probs=122.3
Q ss_pred HHhhhhhhhhhhhcceeec-hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 126 LLTEMPSYINSVLQFDIKS-NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 126 ~~~~~p~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
...+...++.+++|+++.+ .|.+.+....+..+..+.+|+++||+|.|+.+ ..+.+...+..+++.+..
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH
Confidence 3444555666679999999 99999999999999999999999999999977 667777777777777765
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758 205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA 283 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 283 (318)
+...+.+.-++.|.+-+... ....++...+|+ +|+++.|+.+....+|.++++.+.+++ ...+ ...|....++..
T Consensus 114 Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~g-Wr~y~~Ln~Isl 189 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLG-WISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-chhHHHHHHHHH
Confidence 54446666677777765555 445555555555 599999999999999999999999994 4422 235566666777
Q ss_pred HHHHHHHHHHHhhccccc
Q psy4758 284 AIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~ 301 (318)
+...++.++.+++++.++
T Consensus 190 ~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 190 VFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHhCCCCch
Confidence 777777777777775443
No 184
>PRK10133 L-fucose transporter; Provisional
Probab=99.36 E-value=4.2e-11 Score=103.80 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
.+..+.+..+...+.........|.+ ++.+|.|+.+.++..+...++..++.++.|++.||+|+|+.+ .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l----------~ 95 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------I 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence 34555566666677777777888887 556999999999999999999999999999999999999977 6
Q ss_pred HHHHHHHHHHHHHH---hcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhh
Q psy4758 188 IGLWGSAAALVGLS---FVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVG 263 (318)
Q Consensus 188 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g 263 (318)
.+..+..++.++.. ..++...+....++.+.+.+.. .+.......+..|++ +...+++.+....+|..++|.+++
T Consensus 96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667666665542 3334333445555555555443 334344444666666 556799999999999999998877
Q ss_pred eee
Q psy4758 264 FIV 266 (318)
Q Consensus 264 ~l~ 266 (318)
.+.
T Consensus 175 ~l~ 177 (438)
T PRK10133 175 SLI 177 (438)
T ss_pred HHH
Confidence 543
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.36 E-value=8.7e-12 Score=105.37 Aligned_cols=150 Identities=16% Similarity=0.131 Sum_probs=106.5
Q ss_pred HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
.....+|.+.++ +|+++.+.++..+...++..++.++.|+++||+|+|+.+ ..+.++..++.... ..+
T Consensus 18 ~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 18 SVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV----------AAGLLLIAAGILIR-SAP 85 (355)
T ss_pred cCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH----------HHHHHHHHHHHHHH-Hhc
Confidence 345667776666 999999999999999999999999999999999999976 44555555544444 333
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
+...+.+..+..+.+... ..........+..|++|+++.++.+...++|..+++.+.+.+.+..+ .+|+..|...++
T Consensus 86 ~~~~l~~~~~~~g~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~--~~w~~~f~~~~~ 162 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAI-INVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG--GHWQQALAWWAL 162 (355)
T ss_pred cHHHHHHHHHHHHHHHHH-HhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHH
Confidence 333233333444444333 23334445567778789999999999999999999999988877631 238888876665
Q ss_pred HHHHH
Q psy4758 285 IFFFG 289 (318)
Q Consensus 285 ~~~~~ 289 (318)
+.++.
T Consensus 163 ~~~~~ 167 (355)
T TIGR00896 163 PALLA 167 (355)
T ss_pred HHHHH
Confidence 54443
No 186
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.34 E-value=3.9e-12 Score=111.48 Aligned_cols=148 Identities=14% Similarity=0.250 Sum_probs=108.0
Q ss_pred hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--CchhHHHHHHH
Q psy4758 137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GDNLVGAITCL 214 (318)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 214 (318)
+++++..+.|.+.+...++..++.++.|+++||+|+|+.+ ..+.++..++.++.... .+.....+..+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 139 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI----------GIGMFLSSVISIVIPWAAGGGIALVVFCRV 139 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh----------HHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 4788999999999999999999999999999999999976 55555555554444332 22222333344
Q ss_pred HHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758 215 TLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
+.+.+. +...+....+..+..|+ +|++++|+.+...++|..++|.+.+.+.+.. .+|+..|++.++..++..++.
T Consensus 140 ~~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~---~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 140 IQGLAQ-GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW---GGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred HHHHhc-ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCeehhhhhHHHHHHHHHH
Confidence 444443 34455555666677765 4999999999999999999999999988762 279999998888776665555
Q ss_pred Hhhcc
Q psy4758 294 LIFGT 298 (318)
Q Consensus 294 ~~~~~ 298 (318)
+...+
T Consensus 216 ~~~~~ 220 (465)
T TIGR00894 216 FVFPA 220 (465)
T ss_pred HHHhc
Confidence 55443
No 187
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=5.1e-11 Score=104.76 Aligned_cols=179 Identities=15% Similarity=0.133 Sum_probs=125.5
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCc
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQIL 176 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~ 176 (318)
+..++|+.+.+...++............+|.++++ .|.|..+.+.. +...... ++.+++|.++||+ |||+..
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ 83 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGW 83 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHH
Confidence 34556777778888888888888888999999988 79998888886 2223332 6789999999999 887743
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCc--hhH-HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHH
Q psy4758 177 SPTVSRKMWNTIGLWGSAAALVGLSFVGD--NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCAN 252 (318)
Q Consensus 177 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 252 (318)
+..+.+...++...+.+.++ +.. .....++.+.+ .....+...++..|..|+ +|+++.++.....+
T Consensus 84 ---------ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~-~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~ 153 (491)
T PRK11010 84 ---------LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFC-SASQDIVFDAWKTDVLPAEERGAGAAISVLGYR 153 (491)
T ss_pred ---------HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence 24455555555555544432 222 22233333333 334555566666677764 49999999999999
Q ss_pred HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 253 IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 253 ~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+|..+++.+.+++.+.. .+|+..|++.+++.++..+..+..
T Consensus 154 lG~llg~~l~~~l~~~~---~GWr~~f~i~a~l~ll~~l~~~~~ 194 (491)
T PRK11010 154 LAMLVSGGLALWLADRY---LGWQGMYWLMAALLIPCIIATLLA 194 (491)
T ss_pred HHHHHHHHHHHHHHhcc---cCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999988831 589999999888777765555443
No 188
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.32 E-value=1.5e-11 Score=89.13 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=96.8
Q ss_pred hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758 148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
..+...++..++.++.|++.||+++|+.+ ..+.....++.+.....++........+..+.+.. ...+.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 71 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAA-FALVA 71 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHh
Confidence 44566788899999999999999999866 45555555655555555444433333444444333 33455
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
......|..|++ |+++.++.+...+++..++|.+.+.+.+. .+|+..+.+.+.+.+++.+......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF----LGWRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc----cchHHHHHHHHHHHHHHHHHHhhcC
Confidence 555666767665 99999999999999999999999999877 6788888888777777666655443
No 189
>PTZ00207 hypothetical protein; Provisional
Probab=99.32 E-value=3.5e-11 Score=105.94 Aligned_cols=161 Identities=9% Similarity=0.115 Sum_probs=104.7
Q ss_pred HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
....+.+..+.|.. ++.+|+|..+.+.+..... ......++.|++.||+|+|+.+ .++.++..++.++
T Consensus 40 ~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vl----------lig~ll~~iG~ll 107 (591)
T PTZ00207 40 TSFMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIF----------VLSMTVFCLGTLL 107 (591)
T ss_pred HHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHH
Confidence 33445556666655 4559999999888876533 3334566789999999999987 6777777777777
Q ss_pred HHhc------CchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCcc
Q psy4758 200 LSFV------GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVS 273 (318)
Q Consensus 200 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 273 (318)
.... .+.+.+.+..++.+.+... ..+.......+.+|++||.+.|+......+|+++.+.+...+...
T Consensus 108 ~ala~~~~i~~s~~~l~l~r~l~G~G~~~-~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~----- 181 (591)
T PTZ00207 108 FALTFQEVIEGSVVRLSVYNGLMTLGCML-FDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD----- 181 (591)
T ss_pred HHHHhcccccCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 6664 2222233334444444332 223333445567888899999999999999998655554444432
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+|+..|++.+++.++..++.....+
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhee
Confidence 4667777777776666555554433
No 190
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.32 E-value=4.3e-11 Score=102.88 Aligned_cols=169 Identities=15% Similarity=0.164 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCcchHHHHHHHH
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQILSPTVSRKMWN 186 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~r~~~~ 186 (318)
+...++.+.........-+|.|+++ .|+|.++.|.+...... .+..+++|+++||+ ||||.. +
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~---------l 71 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW---------L 71 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH---------H
Confidence 3455667777777888899999999 79999999988655544 58889999999999 776532 2
Q ss_pred HHHHHHHHHHHHHHHhcCc-h-hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhh
Q psy4758 187 TIGLWGSAAALVGLSFVGD-N-LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVG 263 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g 263 (318)
..+.++.+++...+.+.++ . .+.......+...+.....+...++..+..|++ |+++.++.....++|..+++.+.+
T Consensus 72 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~ 151 (402)
T PRK11902 72 LLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL 151 (402)
T ss_pred HHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence 4555555555555555432 2 222222222222334445556666666777766 999999999888999999999988
Q ss_pred eeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 264 FIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+.+.. .+|+..|++.+++.++..+....
T Consensus 152 ~l~~~~---~gw~~~f~i~a~~~l~~~l~~~~ 180 (402)
T PRK11902 152 WLADRV---LGWGNTYLLMAGLMLAGALTTLW 180 (402)
T ss_pred HHHhcc---cCHHHHHHHHHHHHHHHHHHHHh
Confidence 887752 48999999888877665554333
No 191
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.30 E-value=3e-13 Score=118.60 Aligned_cols=261 Identities=12% Similarity=0.131 Sum_probs=0.0
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-----------------C----CCchHHHHHHHHHHHHHHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-----------------P----WGWPSIFYVSGAVAIVWAAA 59 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-----------------~----~gWr~~f~~~~~~~~~~~~~ 59 (318)
|-|..++++-+..+|+..+...+|+++|.++++.+... + ..|..-|++.+.+.++.++.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788899999999999999999999999999877652 0 13777788888888777666
Q ss_pred HHHHhcCCCCCCCCCChh---Hhhhh---hhccCcccc------ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH
Q psy4758 60 WCYIGANSPAQHPFISLE---ERIYI---ETSLVHSST------VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL 127 (318)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (318)
.+.+-++-|+..+...++ +++.. .++..+++. ..++-....+++++||.+....+..........++.
T Consensus 246 l~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~ 325 (539)
T PF03137_consen 246 LFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA 325 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 665544444331111000 00000 000000000 013334567788999999999999999999999999
Q ss_pred hhhhhhhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhh--cCcchHHHHHHHHHHHHHHHHHHHHHHHh--
Q psy4758 128 TEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAK--QILSPTVSRKMWNTIGLWGSAAALVGLSF-- 202 (318)
Q Consensus 128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-- 202 (318)
+++|.|++.+++.++.+++.+.....+ +.++|.+++|++.+|+.-+ +... +. .+..++..+......+
T Consensus 326 tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~------~~-~v~~~v~~~~~~~~~~~~ 398 (539)
T PF03137_consen 326 TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAK------FC-IVVSIVSVILYSPLFFLG 398 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHH------HH-HHHHHHHHHHHHHHHeec
Confidence 999999999999999999988877665 5788899999999998643 2221 11 1111111111000000
Q ss_pred ---------cCc-----------------------------------h----hHHHHHHHHHH-HHHhhhcccccccccc
Q psy4758 203 ---------VGD-----------------------------------N----LVGAITCLTLA-IAINAGTYTGFLSNHL 233 (318)
Q Consensus 203 ---------~~~-----------------------------------~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (318)
..+ . .......+.+. +.......+.......
T Consensus 399 C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR 478 (539)
T PF03137_consen 399 CPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLR 478 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeec
Confidence 000 0 00111121222 2223344455566666
Q ss_pred ccCccchhhHHHHHHHHHH-HHHhHhhhhhheeecc
Q psy4758 234 DLSPNFAGTLMGFTNGCAN-IASILGPLFVGFIVTD 268 (318)
Q Consensus 234 ~~~~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~ 268 (318)
.+.+++|+.|.|+...+.+ +|..-+|.+.|.+.|.
T Consensus 479 ~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 479 CVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------
T ss_pred cCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 6777779999999977765 5778999999999998
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.30 E-value=7.6e-12 Score=104.72 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=110.2
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHH
Q psy4758 104 LTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRK 183 (318)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~ 183 (318)
+||+.+|.+...+++.++.+....++.|.++++..|+|++++|.+.+...+..++.+++.|.++||+|.||.+..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~----- 78 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW----- 78 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH-----
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH-----
Confidence 467889999999999999999999999999998899999999999999999999999999999999998885411
Q ss_pred HHHHHHHHHHH-HHHHHH---HhcCchhHHHHHHHHHHHHHhhh---ccccccccccccCccchhhHHHHHHHHHHHHHh
Q psy4758 184 MWNTIGLWGSA-AALVGL---SFVGDNLVGAITCLTLAIAINAG---TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASI 256 (318)
Q Consensus 184 ~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 256 (318)
.+..++.. .....+ +..+.+. ....+..+...+.. ..+..-++.++ ..++.+--.|=.-..+.+|.+
T Consensus 79 ---~i~~l~~l~~pff~~v~~pll~~n~--~lg~iig~i~l~~~f~~~~~~~Ea~~er-~sr~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 79 ---FIAILLLLFGPFFIYVFGPLLQSNF--WLGAIIGGIYLGLVFNAGVPLSEAYAER-VSRRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp ---HHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTTTTTTHHHHHHHHHHH-HHHHHSS-HHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcccchHHHHHHHH-HHHHhcCCcchHHHHhhHHHH
Confidence 12222111 111111 1112221 11111111111111 11222222222 222355667777888999999
Q ss_pred HhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 257 LGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
++..++|.+.+. +....|++.....++..++....+
T Consensus 153 i~s~~~G~L~~i-----~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 153 IASLLAGILFNI-----NPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHHhheeeee-----CccHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999876 335566665555444444433333
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.30 E-value=5.9e-11 Score=115.09 Aligned_cols=184 Identities=13% Similarity=-0.005 Sum_probs=110.1
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhh----hhhhhhhhhcce-eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTE----MPSYINSVLQFD-IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
.+++++++..++...++..++.+....- ....+.+..+.+ ....++..+...+..++.++++|+++||+++|+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 4677777777666666655554333222 221222212221 13456667777888999999999999999999864
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHH
Q psy4758 177 SPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIAS 255 (318)
Q Consensus 177 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~ 255 (318)
.. ......+....+.. ....++.+.+++..++.+.+... ..+...+...+..|++ ++.++|+.+...++|.
T Consensus 86 ~~------~~~~~~~~~~~~~~-~~~~~s~~~l~~~~~l~gi~~a~-~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~ 157 (1140)
T PRK06814 86 KI------LKFAEIGIAALAIY-GFHLNSVPLLFAALFLMGIHSAL-FGPIKYSILPDHLNKDELLGANALVEAGTFIAI 157 (1140)
T ss_pred HH------HHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHh-hchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence 11 01111111111111 11223333344444555554443 4455555555666555 9999999999999999
Q ss_pred hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+||.++|++.+. .+|+..|...+++.+++.++...++
T Consensus 158 ~igp~l~g~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 158 LLGTIIGGLATIS----GNFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHHHHHHHhc----cccHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999987 6788888544444444444444433
No 194
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.28 E-value=5.1e-11 Score=107.35 Aligned_cols=160 Identities=16% Similarity=0.227 Sum_probs=112.6
Q ss_pred hhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---
Q psy4758 128 TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG--- 204 (318)
Q Consensus 128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--- 204 (318)
..+|. ++++++++..+.|++.+...++..++.++.+++.||.+||+.+ .++.++.+++.+++...+
T Consensus 54 ~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i----------~~g~ll~~lg~ll~alphf~~ 122 (633)
T TIGR00805 54 SSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI----------GIGCAIMGLGSFLLSLPHFLS 122 (633)
T ss_pred hhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE----------EecHHHHHHHHHHHhChHHhc
Confidence 33444 4555999999999999999999999999999999999999988 556666666666554432
Q ss_pred ----------------------------------------------c-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758 205 ----------------------------------------------D-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS 236 (318)
Q Consensus 205 ----------------------------------------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+ ... +.+..++.|.+ .+...+....++.|..
T Consensus 123 ~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG-~~~~~~~~~~~i~d~~ 201 (633)
T TIGR00805 123 GRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG-ATPIFPLGISYIDDFA 201 (633)
T ss_pred CCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc-CCcchhcCchhhhccC
Confidence 0 011 22333444443 3334556667777877
Q ss_pred ccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC--------------c----cchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 237 PNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS--------------V----SQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 237 ~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~--------------~----~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
|++ |+...|+.+....+|..+|+.+++++.+...+ . .+|...|++.+++.++..+..+.++
T Consensus 202 ~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 202 KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 766 99999999999999999999999987754211 0 1367778887777777665555555
Q ss_pred cc
Q psy4758 298 TS 299 (318)
Q Consensus 298 ~~ 299 (318)
++
T Consensus 282 ~~ 283 (633)
T TIGR00805 282 KA 283 (633)
T ss_pred cc
Confidence 43
No 195
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.28 E-value=1e-11 Score=109.37 Aligned_cols=150 Identities=12% Similarity=0.068 Sum_probs=101.5
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---------Cchh-
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---------GDNL- 207 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~- 207 (318)
++.+..+.++..+...++..++.++.|+++||+|||+.+ ..+.++..++.+..... ++..
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~----------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 119 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL----------KIAAVLFFISALGSAWPEFGFTSIGPDNTGY 119 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHhhccccccccccchhH
Confidence 378888999999999999999999999999999999977 45555555554443331 1111
Q ss_pred -H-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----CCccchHHHHH
Q psy4758 208 -V-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN----TSVSQWQTIFL 280 (318)
Q Consensus 208 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~~~~~~~~~~~ 280 (318)
. +.+.-++.+.+.+. ..+....+..|..|++ |++++++.+....+|..+++.+.+.+.... ....+|+..|+
T Consensus 120 ~~~l~~~R~l~G~~~g~-~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~ 198 (479)
T PRK10077 120 VPEFVIYRIIGGIGVGL-ASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFA 198 (479)
T ss_pred HHHHHHHHHHHhhhHhH-HhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHH
Confidence 1 23333444444433 4455555666777655 999999999988999888877655443211 01268999998
Q ss_pred HHHHHHHHHHHHHHhhcc
Q psy4758 281 IAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~ 298 (318)
+.++..++..+...++++
T Consensus 199 ~~~~~~~~~~~~~~~l~~ 216 (479)
T PRK10077 199 SEAIPALLFLMLLYFVPE 216 (479)
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 887777666555444443
No 196
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=2.1e-10 Score=99.68 Aligned_cols=168 Identities=13% Similarity=0.140 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhh--cceeechhhhc-----hHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVL--QFDIKSNGFLS-----AAPYLAQWILILVFSWLADYIVAKQILSPTVS 181 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 181 (318)
+....+..++...-...+....|.+..+.+ +.++. .+... ....++..+++++.|+++||+|||+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l----- 97 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML----- 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH-----
Confidence 333444444444444444445555555433 55555 34332 233455678889999999999999977
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHH
Q psy4758 182 RKMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCAN 252 (318)
Q Consensus 182 r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 252 (318)
..+.++..++.++..+.++... +...-++.+.+.+. ..+....+..|..|++ |+...+..+....
T Consensus 98 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~ 171 (438)
T PRK09952 98 -----MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGG-EWGGAALLAVESAPKNKKAFYSSGVQVGYG 171 (438)
T ss_pred -----HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 6777788888888877776541 22333444444433 3344455666777665 9999999888888
Q ss_pred HHHhHhhhhhheeeccCC----CccchHHHHHHHHHHHHH
Q psy4758 253 IASILGPLFVGFIVTDNT----SVSQWQTIFLIAAAIFFF 288 (318)
Q Consensus 253 ~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~~~~~~~~ 288 (318)
+|..+++.+...+....+ ...+|+..|++.++..++
T Consensus 172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 888888776665543211 126899999877665443
No 197
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.26 E-value=3.2e-09 Score=92.15 Aligned_cols=279 Identities=12% Similarity=0.065 Sum_probs=143.6
Q ss_pred CccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CCCC
Q psy4758 2 SKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQ-----HPFI 74 (318)
Q Consensus 2 ~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 74 (318)
+|.+|++ +|...+++...+.++|..++|.+.+++.+. .|||+.|.+.++.. +.+++.+...++..++ ++..
T Consensus 126 ~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-~Gw~~~F~iaaigm-~l~li~~~~~~~~l~~~~~~~~~~~ 203 (493)
T PRK15462 126 GELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-YSWAMGFGLAAVGM-IAGLVIFLCGNRHFTHTRGVNKKVL 203 (493)
T ss_pred HHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-hChHHHHHHHHHHH-HHHHHHHHHhhhhhccCCCCCCCCc
Confidence 5788875 799999999999999999999999999988 89999999876543 3334333332211111 1111
Q ss_pred ChhHhhh---------------hhhc-cCccccc----------------cccCCcchhhhhcchh--HHHHHHHHHHHH
Q psy4758 75 SLEERIY---------------IETS-LVHSSTV----------------SSSMKVPWKAILTSLP--VWAVLITHLCQN 120 (318)
Q Consensus 75 ~~~~~~~---------------~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 120 (318)
++++... .... ..++... ....+ ..+.-|+|- +..+.+......
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~er~r~~~~~~l~~~~~~Fw 281 (493)
T PRK15462 204 RATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA--ENQKQRKELGLIVTLTFFSMLFW 281 (493)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHhhHHHHHHHHHHHHHHH
Confidence 1100000 0000 0000000 00000 000011221 122222222223
Q ss_pred HHHHHHHhhhhhhhhhh-----hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh-cCcchHHHHHHHHHHHHHHHH
Q psy4758 121 WGYWTLLTEMPSYINSV-----LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK-QILSPTVSRKMWNTIGLWGSA 194 (318)
Q Consensus 121 ~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-~~~~~~~~r~~~~~~~~~~~~ 194 (318)
..+....+-+..|.++. +|++ ....+..+...+.-++.+++.+++=.|..+| +-... .+| ..+++++.+
T Consensus 282 ~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~--~~K--fa~g~~~~g 356 (493)
T PRK15462 282 AFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRI--WGK--FALGLGLMS 356 (493)
T ss_pred HHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCc--HHH--HHHHHHHHH
Confidence 33333334444444442 2332 2355667777777777788877776666432 21111 011 145666666
Q ss_pred HHHHHHHhc----Cc----hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH-HHHHhHhhhhhhe
Q psy4758 195 AALVGLSFV----GD----NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA-NIASILGPLFVGF 264 (318)
Q Consensus 195 ~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~-~~g~~~~~~~~g~ 264 (318)
++++.+... .+ ...+.+....+....-....|...+...++.|++ +|..+|+..... .+|..++..+.+.
T Consensus 357 ~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 357 AGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555321 11 1112333333333334456777777888889988 999999985533 5666666666555
Q ss_pred eeccCC--------CccchHHHHHHHHHHHHHH
Q psy4758 265 IVTDNT--------SVSQWQTIFLIAAAIFFFG 289 (318)
Q Consensus 265 l~~~~~--------~~~~~~~~~~~~~~~~~~~ 289 (318)
..+... +...|...|...+...+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 437 TSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred hccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 432110 1125677777777665554
No 198
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.26 E-value=1.3e-10 Score=101.84 Aligned_cols=177 Identities=14% Similarity=0.060 Sum_probs=117.9
Q ss_pred hcchhHHHHHHHHHHHHHHHHH----HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchH
Q psy4758 104 LTSLPVWAVLITHLCQNWGYWT----LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPT 179 (318)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 179 (318)
+++++++.......+.....+. ....++....+ .|-+ ....++.....++..+..++.|+++|.+|||..+
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~--- 111 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF--- 111 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH---
Confidence 4566666554444333332222 22334544444 6665 4555777778889999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHh
Q psy4758 180 VSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILG 258 (318)
Q Consensus 180 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~ 258 (318)
+.+.++..++.++....++.........+.+.+. +.. ........|..|.+ |..+.++.....-.....+
T Consensus 112 -------i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga-G~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 112 -------IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA-GVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred -------HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh-HHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 7888888889888888777665555555555543 222 23344467777877 8887777665544555567
Q ss_pred hhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 259 PLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 259 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
|.+...+... .+||+.|++..+...++++...++.+
T Consensus 183 ~~ia~~~~~~----~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 183 PLIAQLFAAH----SGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred HHHHHHhccC----CCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 7777666555 68999999998887777766555443
No 199
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.25 E-value=2.1e-10 Score=99.62 Aligned_cols=164 Identities=13% Similarity=0.087 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhc---ceeec---hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSYINSVLQ---FDIKS---NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
+..++.......+....| ++.++++ .+..+ .+.......++..++++++|+++||+|||+.+ .
T Consensus 29 ~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l----------~ 97 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM----------L 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH----------H
Confidence 334444444444444444 4444453 34333 33344555566679999999999999999977 6
Q ss_pred HHHHHHHHHHHHHHhcCchh--------HHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHh
Q psy4758 188 IGLWGSAAALVGLSFVGDNL--------VGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILG 258 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~ 258 (318)
.+.++..++.+...+.++.. .+.+.-++.+.+.+. ..+....+..|..|++ |+.+.++.......|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~-~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGG-EYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhh-hHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 67777777777776665432 133344455554433 4455556666766655 9999998877777777777
Q ss_pred hhhhheeeccC----CCccchHHHHHHHHHHHHHH
Q psy4758 259 PLFVGFIVTDN----TSVSQWQTIFLIAAAIFFFG 289 (318)
Q Consensus 259 ~~~~g~l~~~~----~~~~~~~~~~~~~~~~~~~~ 289 (318)
+.+...+.... ....+|+..|++.++..++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 76544432210 01268999998766655543
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.24 E-value=1.1e-10 Score=103.24 Aligned_cols=148 Identities=13% Similarity=0.134 Sum_probs=100.8
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc------hhHHHHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD------NLVGAITC 213 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 213 (318)
.+..+.+.+.+...++.+++.++.|+++||+|||+.+ ..+.++..++.++.....+ ...+.+..
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r 122 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY----------GMELIIMIIATVASGLSPGSSPKSVMATLCFWR 122 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH----------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHH
Confidence 4455677888889999999999999999999999976 5555555555555554433 12234444
Q ss_pred HHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC-------------------Ccc
Q psy4758 214 LTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT-------------------SVS 273 (318)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~-------------------~~~ 273 (318)
++.+.+.+. ..+....+..|..|.+ |++++++.+....+|..+++.+...+..... ...
T Consensus 123 ~l~G~~~g~-~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (502)
T TIGR00887 123 FWLGVGIGG-DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY 201 (502)
T ss_pred HHHHHHHhh-hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc
Confidence 455554443 4455566777777776 9999999999999999998888765432110 013
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+|+..+.+.++..++..+....+++
T Consensus 202 ~WR~~~~~~~ip~~i~~~~~~~lpE 226 (502)
T TIGR00887 202 MWRILIGFGAVPALLALYFRLTIPE 226 (502)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7999997776666655554444443
No 201
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.24 E-value=8.2e-11 Score=99.49 Aligned_cols=159 Identities=16% Similarity=0.137 Sum_probs=103.3
Q ss_pred HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 126 LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 126 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
.....|.++++ .|+|..+.|..... .+...+ .+++|+++||+ ||||.+ +..+.++.++....+
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~---------l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSW---------LVLTQVLLLSLLLIL 74 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHH---------HHHHHHHHHHHHHHH
Confidence 44567778877 89999999988544 444444 88999999998 666643 234455555554444
Q ss_pred HhcCchhH--HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC----cc
Q psy4758 201 SFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS----VS 273 (318)
Q Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~ 273 (318)
.+..+... ......++.........+...++..|..|++ |+.+.++.....++|..+++.+.+.+.+..+. ..
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 44432221 1222222222333344455556666766555 99999999999999999999999988777321 12
Q ss_pred chHHHHHHHHHHHHHHHHHHHhh
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+|+..|++.+++.++..+.....
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh
Confidence 39999988888776655544433
No 202
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.24 E-value=1.2e-10 Score=101.38 Aligned_cols=171 Identities=18% Similarity=0.080 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH----hhhcCcchHHHHHHHHHHHHHH
Q psy4758 117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI----VAKQILSPTVSRKMWNTIGLWG 192 (318)
Q Consensus 117 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~~~~~~r~~~~~~~~~~ 192 (318)
+...........+++.|+.+.+|+++.++|.+.+...+...+..++.|+++||. ||||.. +..+...
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~---------i~~~~~~ 79 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPW---------LLIGAIP 79 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchh---------HHHhHHH
Confidence 344555667778899999998999999999999999999999999999999984 555543 3556666
Q ss_pred HHHHHHHHHhcCchh-----H-HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 193 SAAALVGLSFVGDNL-----V-GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 193 ~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
.+++..++...++.. . .....+..+.+.. .......+...+.. +++|++..++.+...++|+.+++.+.+.
T Consensus 80 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~ 158 (437)
T TIGR00792 80 FSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP 158 (437)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666665555544321 1 1111222222222 23334444444544 3459999999888888888777666555
Q ss_pred eeccCC---CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 265 IVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 265 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+....+ +..+|+..+.+.+++.++..+......
T Consensus 159 l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 194 (437)
T TIGR00792 159 LVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGT 194 (437)
T ss_pred HHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 543211 235788888888877776665544433
No 203
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.22 E-value=2.3e-10 Score=100.83 Aligned_cols=170 Identities=16% Similarity=0.143 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec-hhh-----hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS-NGF-----LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR 182 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r 182 (318)
+....+..++-..-+..+....| ++.+.++.+..+ ... ..+...++..+++++.|+++||+|||+.+
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------ 90 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL------ 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------
Confidence 33444555555544444444455 444445433222 111 13555677889999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHH
Q psy4758 183 KMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANI 253 (318)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 253 (318)
..+.++.+++.++..+.++... +...-++.+.+.++ ..+....+..|..|++ ||...++......+
T Consensus 91 ----~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~-~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 91 ----AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGG-EYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred ----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHh-hHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 7788888888888888776542 23334444554443 4455566677777655 99999998887777
Q ss_pred HHhHhhhhhheeec----cCCCccchHHHHHHHHHHHHHHH
Q psy4758 254 ASILGPLFVGFIVT----DNTSVSQWQTIFLIAAAIFFFGN 290 (318)
Q Consensus 254 g~~~~~~~~g~l~~----~~~~~~~~~~~~~~~~~~~~~~~ 290 (318)
|..+++.+...+.. ......+|+..|++.+...+++.
T Consensus 166 G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~ 206 (490)
T PRK10642 166 GFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL 206 (490)
T ss_pred HHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH
Confidence 77777765543322 10112689999988765544433
No 204
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=3.2e-10 Score=98.50 Aligned_cols=163 Identities=12% Similarity=0.097 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc-hHH-----HHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS-AAP-----YLAQWILILVFSWLADYIVAKQILSPTVSR 182 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r 182 (318)
....++..++...-...+....|.+.++ ++.++.+.+... +.. .+...++.++.|+++||+|||+.+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------ 89 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL------ 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH------
Confidence 4455666777777777777888877666 788776654332 221 222346789999999999999977
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHH
Q psy4758 183 KMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANI 253 (318)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 253 (318)
..+..+..++..+..+.++... +.+..++.+.+.+. ..+....+..|..|++ |++++++.+...++
T Consensus 90 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 90 ----IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGV-ELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred ----HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccc-cHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 6677777777777777665431 12223333333322 2333445666777665 99999999988888
Q ss_pred HHhHhhhhhheeeccC----CCccchHHHHHHHH
Q psy4758 254 ASILGPLFVGFIVTDN----TSVSQWQTIFLIAA 283 (318)
Q Consensus 254 g~~~~~~~~g~l~~~~----~~~~~~~~~~~~~~ 283 (318)
|..+++.+++.+.... .+..+|+..|++..
T Consensus 165 g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 165 AVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 8877777766553211 01268999998644
No 205
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.21 E-value=2.4e-10 Score=111.09 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=103.0
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccee--echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchH
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDI--KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPT 179 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 179 (318)
+.++++.++.+++..++...........+..++...++.+. ...++..+...++.+++++++|+++||+|||+.+
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l--- 80 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI--- 80 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH---
Confidence 45677777777777777666555554444444444355543 3356777788888999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHH
Q psy4758 180 VSRKMWNTIGLWGSAAALVG---LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIAS 255 (318)
Q Consensus 180 ~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~ 255 (318)
..+.++..+..++ .....+...+.+..++.+.+ .+...+...++..+..|++ |++++|+.....++|.
T Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~ 152 (1146)
T PRK08633 81 -------RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQ-SAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI 152 (1146)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-HHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH
Confidence 3333332222222 22223323233444444443 3445555566677777665 9999999999999999
Q ss_pred hHhhhhhheeecc
Q psy4758 256 ILGPLFVGFIVTD 268 (318)
Q Consensus 256 ~~~~~~~g~l~~~ 268 (318)
.+|+.+++++.+.
T Consensus 153 ~lg~~l~~~l~~~ 165 (1146)
T PRK08633 153 LAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 206
>TIGR00898 2A0119 cation transport protein.
Probab=99.19 E-value=4.8e-11 Score=105.77 Aligned_cols=150 Identities=15% Similarity=0.172 Sum_probs=110.5
Q ss_pred hhhhhhhhhhcce---eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q psy4758 129 EMPSYINSVLQFD---IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD 205 (318)
Q Consensus 129 ~~p~~l~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 205 (318)
+.|...+| ++++ +.+.++..+...++.+++.++.|+++||+|||+.+ ..+.++..++.++..+.++
T Consensus 111 ~~~~i~~e-~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~----------~~~~~~~~i~~~~~~~~~~ 179 (505)
T TIGR00898 111 FSSTIVTE-WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL----------LLSTLVTAVSGVLTAFSPN 179 (505)
T ss_pred ccccEEEE-ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH----------HHHHHHHHHHHHHHHHccc
Confidence 44554444 8888 88899999999999999999999999999999876 5666777777767666666
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 206 NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
.....+..++.+.+. +...+....+..|..|++ |+.+.++......+|..++|.+...+. +|+..+++.++
T Consensus 180 ~~~~~~~r~l~G~~~-~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-------~wr~~~~~~~i 251 (505)
T TIGR00898 180 YTVFLVFRLLVGMGI-GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-------DWRWLQLAVSL 251 (505)
T ss_pred HHHHHHHHHHHHhhc-cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHH
Confidence 554444444444443 334555556666777666 999999998888899888888876552 38888888887
Q ss_pred HHHHHHHHHHhhc
Q psy4758 285 IFFFGNLIFLIFG 297 (318)
Q Consensus 285 ~~~~~~~~~~~~~ 297 (318)
..++..+..++++
T Consensus 252 ~~~~~~~~~~~~~ 264 (505)
T TIGR00898 252 PTFLFFLLSWFVP 264 (505)
T ss_pred HHHHHHHHHHhcC
Confidence 7776666655444
No 207
>KOG2615|consensus
Probab=99.17 E-value=8.6e-11 Score=95.19 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=90.8
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA 217 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
.+-+...+|++.+.+.++.++.++.+|.++||+|||..+ .++.+..++...+++...+.......-+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl----------l~c~~~va~s~ll~~~S~~F~afv~aR~l-- 130 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL----------LACLIGVALSYLLWALSRNFAAFVLARFL-- 130 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 344567788999999999999999999999999999876 66777777777776665543111111222
Q ss_pred HHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 218 IAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
.+..-.......++..|+.+++ |+.+++.++....+|-.+||.++|++..
T Consensus 131 ~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 131 GGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 2333345566677788888777 9999999999999999999999999987
No 208
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.14 E-value=1.1e-10 Score=100.56 Aligned_cols=280 Identities=17% Similarity=0.138 Sum_probs=145.5
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV 87 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (318)
++||...+.......+|.+++..++|.+.+. .++|..|.+.+++..+..+...+..+|.++.+........+...+..
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~- 197 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-FGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCL- 197 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-CCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchh-
Confidence 3488999999999999999999999999998 89999999998888877666666666522211100000000000000
Q ss_pred ccccccccCCcchhhhhcchhHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhc---ceeechhhhchHHHHHHHHHHHHH
Q psy4758 88 HSSTVSSSMKVPWKAILTSLPVWAVLI-THLCQNWGYWTLLTEMPSYINSVLQ---FDIKSNGFLSAAPYLAQWILILVF 163 (318)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
....++.....++.+++|.+|...+ ..++............-.+..+..+ +++...+.+..+..++.++|..+.
T Consensus 198 --~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y 275 (433)
T PF03092_consen 198 --FGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLY 275 (433)
T ss_pred --hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000222234556677787776665 2222221111111101111223344 777777766655566666666665
Q ss_pred HHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---------CchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758 164 SWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---------GDNLVGAITCLTLAIAINAGTYTGFLSNHLD 234 (318)
Q Consensus 164 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
.+...+..-|+++ .....+.....+.-+.+. ++. ...+.--.+.................+
T Consensus 276 ~~~~~~~~~R~~~---------~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~ 345 (433)
T PF03092_consen 276 RKYFSNWSWRRIF---------VVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLAAR 345 (433)
T ss_pred HHHHhCCCHHHHH---------HHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHHHH
Confidence 5544444444432 222222222222111111 111 111111112222222223333334445
Q ss_pred cCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC----ccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 235 LSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS----VSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 235 ~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
.-|+. .|+.+++..++.|+|..++..++..+.+..+. ..+.....++..++.++.+.+..+++++++
T Consensus 346 lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 346 LCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 66665 99999999999999999999888887665321 122334444445555555555545555433
No 209
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.14 E-value=6.2e-10 Score=95.36 Aligned_cols=175 Identities=12% Similarity=0.048 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhh--chHHHHHHHHHHHHH-HHhHHHHhhhcCcchHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFL--SAAPYLAQWILILVF-SWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
+..+...++.+...+......+|.++++ .|.|..+.|.+ .........+.+++. ++..||.|+||..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~--------- 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW--------- 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH---------
Confidence 3455667788888888889999999999 79999999997 355677787788777 4478999988864
Q ss_pred HHHHHHH-HHHHHHHHH-h--cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhh
Q psy4758 186 NTIGLWG-SAAALVGLS-F--VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 186 ~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~ 260 (318)
++.+.+ .......+. . ..+...+..........+.....+.......+..+++ ++...+.......+|..+++.
T Consensus 73 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~ 151 (390)
T TIGR02718 73 -VLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGA 151 (390)
T ss_pred -HHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 222211 111122222 1 1111112222222222233333333443433434443 677777777766788888888
Q ss_pred hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
..+++.+. .+|+..|++.+++.++..+......+
T Consensus 152 ~~~~l~~~----~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 152 GTLVLFGK----FGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888 78999999999887776666555443
No 210
>KOG2532|consensus
Probab=99.12 E-value=1.8e-10 Score=99.32 Aligned_cols=153 Identities=11% Similarity=0.092 Sum_probs=121.6
Q ss_pred hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHH
Q psy4758 137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCL 214 (318)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 214 (318)
.+.+++.+-+++.+....+.+++.+.+|++.||+|.|+++ ..+.++.++..++.+...+... +.+.-+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~----------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF----------FISGLISALLTLLTPLAASIGFYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 4778889999999999999999999999999999999987 6677777777777776654332 455666
Q ss_pred HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+.|.+.+...+........-.+|++|++..++.....++|..++-++.|.+.+.. .||+.+|++.+++.++..++..
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~---~GW~sifY~~g~~g~i~~~~w~ 213 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS---LGWPSIFYVFGIVGLIWFILWF 213 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC---CCCchHHHHHHHHHHHHHHHHH
Confidence 6776655555444454555555666999999999999999999999999998883 7999999999999888877777
Q ss_pred hhcccccC
Q psy4758 295 IFGTSEVQ 302 (318)
Q Consensus 295 ~~~~~~~~ 302 (318)
.+..++++
T Consensus 214 ~~~~d~P~ 221 (466)
T KOG2532|consen 214 LFYSDSPS 221 (466)
T ss_pred HHhcCCcc
Confidence 66554433
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.10 E-value=1.4e-09 Score=95.50 Aligned_cols=176 Identities=14% Similarity=0.028 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSRKMWN 186 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r~~~~ 186 (318)
...+..+........+..|++.|+.+..|+++..+|.+....-+...+..++.|+++|| +||||.. +
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~---------i 80 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW---------I 80 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh---------H
Confidence 34455555667777788999999999999999999999999999999999999999995 5887654 3
Q ss_pred HHHHHHHHHHHHHHHhcCch--h-H--HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhh
Q psy4758 187 TIGLWGSAAALVGLSFVGDN--L-V--GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~ 259 (318)
..+.+..+++..++...++. . . .......+...+.........+...|+. +++|.+..+......++|+.+.+
T Consensus 81 l~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~ 160 (473)
T PRK10429 81 LIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA 160 (473)
T ss_pred hhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666665555443311 1 1 1111222222223334455555666665 34499988887777777766665
Q ss_pred hhhheeeccCC---CccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 260 LFVGFIVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 260 ~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+...+.+..+ +..+|.....+.+++.+++.+....
T Consensus 161 ~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 161 GFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 55443322211 1135666666666655555444443
No 212
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.10 E-value=1.5e-09 Score=93.67 Aligned_cols=164 Identities=16% Similarity=0.140 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhh-hcCcchHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVA-KQILSPTVSRKMWNTIG 189 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~r~~~~~~~ 189 (318)
.+.+..++.+..+.....+++.+++++.|++..+.|++.+...++.++++++.|+++||+|+ |+.+ .++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~----------~~~ 75 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVY----------AVC 75 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHH
Confidence 35667778888888888999999988899999999999999999999999999999999976 4443 444
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccc----cccc----ccCccc-hhhHHHHHHHHHHHHHhHhhh
Q psy4758 190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFL----SNHL----DLSPNF-AGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~-~~~~~g~~~~~~~~g~~~~~~ 260 (318)
.++..+......+.++.+.+.......+.+.... .+... .... |...+. |.+..| .+|..++|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~ 148 (418)
T TIGR00889 76 HFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPT-IALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMW 148 (418)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccH-HHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHH
Confidence 5555555555555544333333333333322211 11111 1111 212222 444444 367888888
Q ss_pred hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+.+.+... ..+ ..|++.++..++..++....
T Consensus 149 l~g~l~~~----~~~-~~f~~~~~~~~~~~~~~~~~ 179 (418)
T TIGR00889 149 AVSLLDIE----LSN-IQLYITAGSSALLGVFALTL 179 (418)
T ss_pred HHHHhccc----chh-HHHHHHHHHHHHHHHHHhcC
Confidence 88877222 223 34555555555554443333
No 213
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=5.7e-10 Score=96.73 Aligned_cols=175 Identities=15% Similarity=0.036 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH----HHhhhcCcchHHHHHHHHHHHHH
Q psy4758 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD----YIVAKQILSPTVSRKMWNTIGLW 191 (318)
Q Consensus 116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~r~~~~~~~~~ 191 (318)
.+...........+++.|+.+..|+++...|.+.....+...+..++.|.++| |+||||.. +..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~---------~l~g~i 80 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW---------ILIGAI 80 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE---------eehhhH
Confidence 34555566667778899999989999999999999999999999999999999 78888876 356667
Q ss_pred HHHHHHHHHHhc-C-chh----H-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHHHHHHHHhHhhhhh
Q psy4758 192 GSAAALVGLSFV-G-DNL----V-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNGCANIASILGPLFV 262 (318)
Q Consensus 192 ~~~~~~~~~~~~-~-~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~~~ 262 (318)
..+++..++... + +.. . .......+.............+...|..++ +|.+..+.......+|..+...+.
T Consensus 81 ~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~ 160 (428)
T PF13347_consen 81 LLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLA 160 (428)
T ss_pred HHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 777777666655 3 111 1 112222222333344455566667777764 499999999998999888777777
Q ss_pred heeeccCCCc---cchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 263 GFIVTDNTSV---SQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 263 g~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+.+.+..++. .+|.....+.+++.+++.++.....|+
T Consensus 161 ~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 161 PILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 7777654432 268888888888877777666665554
No 214
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.08 E-value=2.3e-09 Score=91.80 Aligned_cols=128 Identities=20% Similarity=0.223 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhcc
Q psy4758 154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTY 225 (318)
Q Consensus 154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 225 (318)
+...+++++.|+++||+|||+.+ ..+.++..++..+..+.++... ..+..++.+.+. +...
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-~~~~ 114 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTL----------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSL-GGEW 114 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHH----------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhc-cccc
Confidence 33456889999999999999976 6677777777777776665431 122223333322 2333
Q ss_pred ccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC----CccchHHHHHHHHHHHHHHHHH
Q psy4758 226 TGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT----SVSQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
+....+..|..|++ |+...++.+....+|..+++.+.+.+.+..+ ...+|+..|.+.+++.+++...
T Consensus 115 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 115 GGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred cccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 44455566666555 9999999999999999999887665532110 1257898888776665554443
No 215
>PRK09669 putative symporter YagG; Provisional
Probab=99.08 E-value=8.6e-10 Score=96.12 Aligned_cols=175 Identities=7% Similarity=-0.035 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHHHHHHH
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r~~~~~ 187 (318)
..+..+........+..+++.|+.+++|+++.++|.+....-+...+..++.|+++|| +||||.. +.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~---------il 84 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPY---------LL 84 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchh---------HH
Confidence 3344444555566778889999999999999999999999999999999999999999 5555543 34
Q ss_pred HHHHHHHHHHHHHHhcCchh-----H-HHHHHHHHHHHHhhhccccccccccccCc--cchhhHHHHHHHHHHHHHhHhh
Q psy4758 188 IGLWGSAAALVGLSFVGDNL-----V-GAITCLTLAIAINAGTYTGFLSNHLDLSP--NFAGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~ 259 (318)
.+.+..++...+....++.. . ..+..++...+.. .......+...|..+ ++|.+..+......++|+.+++
T Consensus 85 ~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 85 WFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555554444443211 1 2222222333333 344445556656554 4488888888888888888777
Q ss_pred hhhheeeccCC---CccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 260 LFVGFIVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 260 ~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
.+...+....+ ...+|...+.+.+++.++..+..+..
T Consensus 164 ~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 164 VIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 65444333221 12467777777776666655544443
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.07 E-value=2.6e-09 Score=90.95 Aligned_cols=138 Identities=20% Similarity=0.110 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
.+...++++++.+.....++|.|+++ .|+|..|+|.+.+...+..+++.+++|.++||.++++-+ ..+..
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~---------l~~~~ 75 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI---------LALLS 75 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH---------HHHHH
Confidence 35566777788888888999999999 899999999999999999999999999999998754422 13444
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhh
Q psy4758 191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 260 (318)
++.++.+......++.+......+.... +.....+...+...+..+ +++.-+|-.-..+.+|-.++..
T Consensus 76 l~~~~~~~~~~~~~~f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~-~~~~~YG~iRlwGSiGf~~~~~ 143 (400)
T PF03825_consen 76 LLSALALLLLAFSSSFWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG-DRGKDYGRIRLWGSIGFIVAAL 143 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc-cccCCCCcchhhhhHHHHHHHH
Confidence 5555555555555444433333333322 223333333333333222 2344455555555555555533
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.07 E-value=3.6e-09 Score=86.87 Aligned_cols=163 Identities=17% Similarity=0.121 Sum_probs=116.3
Q ss_pred HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758 124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV 203 (318)
Q Consensus 124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 203 (318)
...+-.+-+.+++.++.+..+++++......+..+.++..+++.+|+|.|+.+ +.++.+.+++..++.-.
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi----------~lgL~l~avg~~lF~pA 98 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI----------VLGLLLYAVGAALFWPA 98 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHhhh
Confidence 34444455566667999999999999999999999999999999999999977 78888888888877533
Q ss_pred Cch---hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----------
Q psy4758 204 GDN---LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN---------- 269 (318)
Q Consensus 204 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---------- 269 (318)
.+. ......++.++.+.+. .-...+.++..+.+++ ...-+.+...+..+|+.++|.+++.+..+.
T Consensus 99 a~~~~y~~FL~~lFila~Gi~~-LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 99 ASSKSYGFFLVALFILASGIGL-LETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hhhhhHHHHHHHHHHHHhhhHH-HHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 322 2133334445554433 4455555666666665 788899999999999999999999988731
Q ss_pred -----CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 270 -----TSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 270 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+...++..+...+...++..+.....+
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 1113456677766666665555554443
No 218
>KOG3762|consensus
Probab=98.99 E-value=8.5e-09 Score=87.50 Aligned_cols=180 Identities=16% Similarity=0.144 Sum_probs=135.1
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 181 (318)
.++.++....+.+...+...+...+.+++=-+++| .+..+..-|........+-++.-++.+++.+|+|+-+++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 45677777777777777777777777777667777 677777778777777778888889999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHH-HHHHHhHhh
Q psy4758 182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGC-ANIASILGP 259 (318)
Q Consensus 182 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~-~~~g~~~~~ 259 (318)
.+++.+..+=++.+.+..+.|..+.+-++-+. ..+..+....++++.+.|.+ ++++.++.... ..+|-.+|.
T Consensus 440 -----~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 440 -----YLGLACNVGRFLYYSYLQNPWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred -----eehhhHHHHHHHHHHHhcCchheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 66777778888888888887753333344444 34556677777777777777 99999998555 568888999
Q ss_pred hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+++|.+.+. .+-+..|...++.+++.+++...+.
T Consensus 514 lIGG~~v~~----fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 514 LIGGFVVER----FGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhhhee----ehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998 6667788777777666665555443
No 219
>KOG2504|consensus
Probab=98.96 E-value=3.3e-09 Score=92.73 Aligned_cols=173 Identities=10% Similarity=0.075 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHH----HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 110 WAVLITHLCQNWGYWTL----LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~----~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
|.+.+..+......+++ ..+.+.+.++ ++.+..+++++.++...+..+..++.+.+.||+|.|.+.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~-f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~--------- 114 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDY-FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM--------- 114 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHH-hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH---------
Confidence 44444554444444433 3334444444 888888899999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHHH-HHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 186 NTIGLWGSAAALVGLSFVGDNLVGAI-TCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
+.+.++..+++++..+..+.+.+++ ..+..|.+++. .+..........++++|+.+.|+......+|.++-|.+...
T Consensus 115 -i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~-~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 115 -IAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGL-IYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchh-hhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 8888999999999999887654333 33344444333 44445555557888899999999999999999999999999
Q ss_pred eeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+.+. .+|+..++..+.+.+-..+.....++
T Consensus 193 l~~~----~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 193 LLSK----YGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHH----hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999 89999999999888777666666655
No 220
>PRK11462 putative transporter; Provisional
Probab=98.95 E-value=1.4e-08 Score=88.67 Aligned_cols=175 Identities=10% Similarity=-0.048 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH----hhhcCcchHHHHHHHHH
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI----VAKQILSPTVSRKMWNT 187 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~~~~~~r~~~~~ 187 (318)
..+.-+..+..+.....|+..|+.+..|+++..+|.+..+.-+...+.-++.|.++||. ||||.. +.
T Consensus 14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~---------il 84 (460)
T PRK11462 14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPW---------VL 84 (460)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchh---------Hh
Confidence 33444455666677778999999999999999999999999999999999999999975 555543 45
Q ss_pred HHHHHHHHHHHHHHhcCchh----H-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHHHHHHHHhHhhh
Q psy4758 188 IGLWGSAAALVGLSFVGDNL----V-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNGCANIASILGPL 260 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~ 260 (318)
.+.+..+++..++...++.. . .......+.............+...++.++ +|++..+......++|+.+++.
T Consensus 85 ~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~ 164 (460)
T PRK11462 85 FGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTV 164 (460)
T ss_pred HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56566666665555444211 1 122222222223333445555566666554 4999999999999988887777
Q ss_pred hhheeeccCCC---ccchHHHHHHHHHHHHHHHHHHHh
Q psy4758 261 FVGFIVTDNTS---VSQWQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 261 ~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
+...+.+..++ ..+|.....+.+++.+++..+...
T Consensus 165 ~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 165 LMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 65554443221 135666666666655555544443
No 221
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.94 E-value=5.6e-09 Score=82.09 Aligned_cols=138 Identities=16% Similarity=0.067 Sum_probs=92.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV 198 (318)
Q Consensus 119 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~ 198 (318)
.....|.+..|.|..-+ .+|+|++|...+.....++..+| ++.|.+.|++|.+..+ .++.+...++..
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l----------~iG~~~~~~GY~ 81 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVL----------LIGAVLGFVGYG 81 (250)
T ss_pred hcCcccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHH----------HHHHHHHHHHHH
Confidence 34455666677776655 49999999999988888888764 8889999999999866 566666666665
Q ss_pred HHHhcCch-----hHHHHHHH-HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 199 GLSFVGDN-----LVGAITCL-TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 199 ~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.....-+. ..+.+..+ .++................+.+|++||++.|+.-....+++++-..+...+.+.
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 55433211 11222222 222111122222333334466899999999999999999999888887777665
No 222
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.92 E-value=1.8e-08 Score=88.17 Aligned_cols=181 Identities=12% Similarity=0.018 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN 186 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~ 186 (318)
+....+...++..... ......++.++++.+|+++.+.+.+.+...+...+-.+ +|.++||++.. |..|++.+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~-----G~rRr~~l 98 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLF-----GYTKRWYL 98 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCC-----CccchHHH
Confidence 3344555567777777 77777888888887999999998888888888888554 99999999610 11122333
Q ss_pred HHHHHHH-HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhh---HHHHHHHHHHHHHhHhhhhh
Q psy4758 187 TIGLWGS-AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGT---LMGFTNGCANIASILGPLFV 262 (318)
Q Consensus 187 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~g~~~~~~~~ 262 (318)
.++.++. .+.+..+...++.......++++........-........|..+++++. ..+......++|..+++.+.
T Consensus 99 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~ 178 (468)
T TIGR00788 99 VLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLG 178 (468)
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHH
Confidence 4554444 2333333332332222332233333333333344555555555544333 34444455668999999999
Q ss_pred heeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 263 GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 263 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
|.+.+. .+|+..|++.+++.++..+...+.++
T Consensus 179 G~l~~~----~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 179 GPLLDK----TLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHHh----cCcchHHHHHHHHHHHHHHHHHhccc
Confidence 999888 68999998888887777444444443
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.90 E-value=5.4e-08 Score=82.85 Aligned_cols=183 Identities=13% Similarity=0.098 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL 190 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 190 (318)
.....-+.....+.....|+..|+.|+.|+++..+|.++.+.=+..++.-++.|.++||..+|+-- ||+++..+.
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr-----fRP~lL~g~ 90 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR-----FRPWLLWGA 90 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc-----ccHHHHHHh
Confidence 344556666777788889999999999999999999999999999999999999999976544322 344456666
Q ss_pred HHHHHHHHHHHhcCch-----hH-HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhhhhh
Q psy4758 191 WGSAAALVGLSFVGDN-----LV-GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGPLFV 262 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~~~~ 262 (318)
+..++...+....++. .. ..+..++.+.+ .......+.+...+.. |++|.+..+.-....++|+.+...+.
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~-YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~ 169 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLG-YTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF 169 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHH-HHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666555531 11 22223333333 3334455555555554 44599999999999999888777777
Q ss_pred heeeccCCC---ccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 263 GFIVTDNTS---VSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 263 g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+.+....++ ..+|.....+.+++.++..+.++.-.++
T Consensus 170 ~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~E 209 (467)
T COG2211 170 PPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKE 209 (467)
T ss_pred HHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 666654332 2477777777776666666555554443
No 224
>KOG0254|consensus
Probab=98.88 E-value=5e-08 Score=86.57 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=108.4
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG 223 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (318)
+.+++.+...++..+++++.|+++|++|||+.+ ..+.+...++.++.....+...+.+.-++.+.+.+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l----------~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~- 158 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL----------LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGG- 158 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhh-
Confidence 347899999999999999999999999999987 778888888888888887666566666777766544
Q ss_pred ccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758 224 TYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (318)
.......+..|..|.+ ||...+..+....+|..++ .+.+...+.. . .+|+..+.+..+..++..+..++.
T Consensus 159 ~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~ 229 (513)
T KOG0254|consen 159 ASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFL 229 (513)
T ss_pred hhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567777888999987 9999999999999887777 6666665542 1 489988887777777766664443
No 225
>KOG0255|consensus
Probab=98.87 E-value=3.4e-09 Score=94.36 Aligned_cols=139 Identities=16% Similarity=0.103 Sum_probs=109.9
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA 217 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
.+.+.....+..+...++..+|++++|.++||+|||+++ ..++++..++-+...+.++.....+.-++.+
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~----------~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL----------LVSLLLFIIFGILTAFAPNYWMFLIFRFLSG 182 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH----------HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 556667777888889999999999999999999999987 7788888888888888888776666677777
Q ss_pred HHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758 218 IAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
.+..+..........+-..|++|+.+..+ ......++.+++...+++.. +|+..+++..+..++..++.
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------~Wr~~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------DWRWLFWIISIPSGLFLLLW 251 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHH
Confidence 77666554444444444445559999999 88888889999999888866 58999998888877766663
No 226
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.79 E-value=3.2e-07 Score=77.83 Aligned_cols=288 Identities=14% Similarity=0.135 Sum_probs=144.1
Q ss_pred CccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCC--
Q psy4758 2 SKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANS----PAQHPF-- 73 (318)
Q Consensus 2 ~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~-- 73 (318)
+|.+|++ +|-..++++.++.++|+.++|.+.+++.+. .||+..|...++-..+. ++.+...|.. +..++.
T Consensus 143 g~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-~g~~~gF~~aavGm~~g-l~~f~~~~r~~~~~~~~~~~~~ 220 (498)
T COG3104 143 GELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-YGWHVGFGLAAVGMIIG-LVIFLLGRRHVKGIGGVPDPNP 220 (498)
T ss_pred HHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHH-HHHHHHccchhcCCCCCCCccc
Confidence 4566654 478889999999999999999999999999 99999999877655544 4444443321 111111
Q ss_pred CChhHhhh---------hhh----ccCccccc----------c---ccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHH
Q psy4758 74 ISLEERIY---------IET----SLVHSSTV----------S---SSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTL 126 (318)
Q Consensus 74 ~~~~~~~~---------~~~----~~~~~~~~----------~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 126 (318)
.+..+... ... ....+.-. + -.+.....+...+ ++.+..+. .+.....++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~-Lfl~~~iFW~~ 299 (498)
T COG3104 221 LSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIP-LFLFAVIFWAL 299 (498)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 01000000 000 00000000 0 0000000010011 22222221 12222222222
Q ss_pred ----Hhhhhhhhhh----h-hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhc--CcchHHHHHHHHHHHHHHHHH
Q psy4758 127 ----LTEMPSYINS----V-LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQ--ILSPTVSRKMWNTIGLWGSAA 195 (318)
Q Consensus 127 ----~~~~p~~l~~----~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--~~~~~~~r~~~~~~~~~~~~~ 195 (318)
.+-+..|..+ . +|++ ....+..+...+.-++.+++..++-.+.++++ .... +| ..+++.+++.
T Consensus 300 ~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~---~K--FalGl~l~g~ 373 (498)
T COG3104 300 YEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTP---IK--FALGLILAGL 373 (498)
T ss_pred HHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcc---hH--HHHHHHHHHH
Confidence 2223333322 1 2222 33456667777777888888888888865553 1111 11 1345555555
Q ss_pred HHHHHHhc-------Cch-hH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 196 ALVGLSFV-------GDN-LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 196 ~~~~~~~~-------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
+++++... ++. +. +.+....+....-.+..+.-........|+. .+..+++.......+..++..+.+.-
T Consensus 374 ~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~ 453 (498)
T COG3104 374 GFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLT 453 (498)
T ss_pred HHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccc
Confidence 55444332 111 11 3333333333334455666666666777777 88888887777777777766666632
Q ss_pred ecc--CCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 266 VTD--NTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 266 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.+. ..+.......|..++...++..+......+
T Consensus 454 ~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 454 AVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 211 011134556677777666665555544433
No 227
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=1.6e-06 Score=73.97 Aligned_cols=247 Identities=13% Similarity=0.019 Sum_probs=145.3
Q ss_pred CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCChhHhhh
Q psy4758 6 PPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGA----NSPAQHPFISLEERIY 81 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (318)
+++++.+.++.+.-.=-+.-+++|++.|.+... .+.+....+.++..++...+=++++. ..|+-+.+.++++.+.
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~-~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~ 221 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTF-ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESES 221 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccc
Confidence 345667777777777788899999999999887 88888888877777776555443332 2222111111111000
Q ss_pred hhhc---cCccccc---------cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc
Q psy4758 82 IETS---LVHSSTV---------SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS 149 (318)
Q Consensus 82 ~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~ 149 (318)
.++. .++++.. -+....+|+..+++|.+.... ...+.++...++...+..|+.+ .|+++...|.+-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~-~G~s~~~igi~R 299 (432)
T PF06963_consen 222 SSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKS-QGYSPSVIGIFR 299 (432)
T ss_pred cccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHH-CCCCHHHHHHHH
Confidence 0000 0000000 012234566677777555444 4444444466677888889988 599999999999
Q ss_pred hHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHH-----HHHhhh
Q psy4758 150 AAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN-LVGAITCLTLA-----IAINAG 223 (318)
Q Consensus 150 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~ 223 (318)
+...+.++.++++..++.+|+|..|.-..+ ...-..+..++...+....+. .......++.+ .|..+.
T Consensus 300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~------l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~f 373 (432)
T PF06963_consen 300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWS------LWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSF 373 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHH------HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999977654221 112222222233233222222 11111222222 233333
Q ss_pred ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758 224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
-........+++++++||+..|+-+..+++...+.-.+
T Consensus 374 DL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 374 DLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555569999999999999887655444
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.75 E-value=2.2e-07 Score=81.22 Aligned_cols=63 Identities=10% Similarity=0.063 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK 173 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 173 (318)
...+..+...........+++.|+++..|+++.++|.+.....+...+..++.|+++||.++|
T Consensus 12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~ 74 (448)
T PRK09848 12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTR 74 (448)
T ss_pred hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCC
Confidence 344445455666666677788899998999999999999999999999999999999997543
No 229
>KOG2533|consensus
Probab=98.73 E-value=7.5e-08 Score=83.59 Aligned_cols=153 Identities=16% Similarity=0.104 Sum_probs=108.2
Q ss_pred hhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Q psy4758 136 SVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLT 215 (318)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
+..++...+.+.+.+...++.+++.+.++.+.||++..+.+ ....++..+..++....++.+.....-++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l----------~~~~~~w~~~~~~~~~~~s~~~~ialr~l 143 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL----------SVSGILWGLFGFLTAAVHSFPGLIALRFL 143 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH----------HHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44778888899999999999999999999999999955433 22222222222222334444435556666
Q ss_pred HHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC--CCccchHHHHHHHHHHHHHHHHH
Q psy4758 216 LAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN--TSVSQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
.|.+-+. .+|....++...+.++ |+.-+|+.+...++|+++|+.+...+.... ....+|++.|++.+++.++..++
T Consensus 144 lGl~es~-~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 144 LGLFESG-GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHHHhcc-cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 6666544 5566555666666554 999999999999999999999988865422 22379999999999988887766
Q ss_pred HHhhccc
Q psy4758 293 FLIFGTS 299 (318)
Q Consensus 293 ~~~~~~~ 299 (318)
.++..+.
T Consensus 223 ~f~~lp~ 229 (495)
T KOG2533|consen 223 VFFFLPD 229 (495)
T ss_pred EEEEecC
Confidence 6555443
No 230
>KOG2325|consensus
Probab=98.71 E-value=8e-08 Score=82.03 Aligned_cols=272 Identities=11% Similarity=0.094 Sum_probs=150.0
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-CC-----------chHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-WG-----------WPSIFYVSGAVAIVWAAAWCYIGANSPA 69 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-~g-----------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 69 (318)
++-...++|.++++....+..+|.++||.++..+..-. -| +-.+=|+++++.++..++..++++|.++
T Consensus 155 a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 155 ADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 34455688999999999999999999998887776520 12 2345678888888888888888888776
Q ss_pred CCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc
Q psy4758 70 QHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS 149 (318)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~ 149 (318)
+....+.++.++ .+.+.++.+..+.+ .+..+.+.+..+...+.+....+..+.+....++++..++-...
T Consensus 235 ~~~~~~~~~~~~----~~~~~~~~~~~~~d------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~ 304 (488)
T KOG2325|consen 235 GIIDKKKRSVEE----EKSDIEKVKKPKLD------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYN 304 (488)
T ss_pred Cccccccccchh----hccchhhhccCChh------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhh
Confidence 543221111100 00000000111111 13345556666667777777777777787777888877765544
Q ss_pred hHHH-HHHHHHHHHH-HHhHHHH---hhhcCcchHHHHHHHHHHHHHHHHHHHHHHH--h--cCc---------------
Q psy4758 150 AAPY-LAQWILILVF-SWLADYI---VAKQILSPTVSRKMWNTIGLWGSAAALVGLS--F--VGD--------------- 205 (318)
Q Consensus 150 ~~~~-~~~~~~~~~~-g~l~dr~---g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~--~--~~~--------------- 205 (318)
+... +.+++...+. ....-|. .+|+.+ ..+++.......+.. + ...
T Consensus 305 gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~----------~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~ 374 (488)
T KOG2325|consen 305 GITLSISGILSVILLLLYIFTRLGKIDKRRII----------LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFE 374 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhccceee----------eehHHHHHHhhheeeeeccccccccccccccccCcCcc
Confidence 4432 2233333222 2222232 334433 223222222222211 1 100
Q ss_pred -hhH--------HHHHHHH----HHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758 206 -NLV--------GAITCLT----LAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV 272 (318)
Q Consensus 206 -~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 272 (318)
..+ .....+. ++.++-.........+...+.|.++++..|++......+..++|.+...+...
T Consensus 375 ~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~---- 450 (488)
T KOG2325|consen 375 EYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL---- 450 (488)
T ss_pred cchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh----
Confidence 000 1111111 11111111122344455566778899999999999999999999999888887
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 273 SQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
.+++..+.+.....++...+.....
T Consensus 451 ~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 451 SGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777666655555544444433
No 231
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=6.8e-07 Score=72.74 Aligned_cols=156 Identities=16% Similarity=0.096 Sum_probs=117.4
Q ss_pred HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
+....++..-++ +|+|...+|++.+++.++..+.+++..++.+|+|.++.+ ..++++.+++..+=...
T Consensus 30 svgPLL~~Ir~~-~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l----------~~~Llli~~G~~iR~~~- 97 (395)
T COG2807 30 SVGPLLDEIRQD-LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL----------FLALLLIAAGILIRSLG- 97 (395)
T ss_pred hhhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH----------HHHHHHHHHHHHHHhcc-
Confidence 333444444444 899999999999999999999999999999999999866 55666666655544433
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
+...++....+.+.+ .+..+......+.+-+|++.+..+|++....++++++++.+.-.+.++. .+|+..+.+-+.
T Consensus 98 ~~~~L~~gt~l~G~g-Iav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~---~gW~~aL~~WAl 173 (395)
T COG2807 98 GLPLLFLGTLLAGAG-IAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---GGWRGALGFWAL 173 (395)
T ss_pred cHHHHHHHHHHHHhh-HHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh---ccHHHHHHHHHH
Confidence 222233333333333 3445666777788889999999999999999999999999999998884 589999998888
Q ss_pred HHHHHHHHHHhh
Q psy4758 285 IFFFGNLIFLIF 296 (318)
Q Consensus 285 ~~~~~~~~~~~~ 296 (318)
..++..+..+.-
T Consensus 174 ~allAl~~WlPq 185 (395)
T COG2807 174 LALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHhhh
Confidence 888877665544
No 232
>KOG0569|consensus
Probab=98.69 E-value=7.7e-08 Score=82.65 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=93.2
Q ss_pred hhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHhh
Q psy4758 146 GFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGDNLVGAITCLTLAIAINA 222 (318)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 222 (318)
+...+...+++++|+++.++++||+|||..+ .+..++..++.++... .+....+.+.-++.|.. .+
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l----------~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~-~g 131 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNAL----------LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLA-CG 131 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hH
Confidence 4556777899999999999999999999766 3333333333333322 22222234444444444 34
Q ss_pred hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh-heeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV-GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
........+..|..|.+ ||....+......+|..++..++ ..+... ...|...+.+..+..++..+...+.++
T Consensus 132 l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt---~~~W~~l~~~~~i~~~~~l~~l~~~PE 206 (485)
T KOG0569|consen 132 LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT---EDLWPYLLAFPLIPALLQLALLPFLPE 206 (485)
T ss_pred HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC---CcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45566777888999999 99999999998888888885443 233333 367888888777777777666666554
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.64 E-value=5.2e-07 Score=81.34 Aligned_cols=167 Identities=14% Similarity=0.084 Sum_probs=113.4
Q ss_pred HHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 122 GYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 122 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
++|++...+..|+.+.+|++...+..+........-+..+++|+++|+ +|+++.+ .++.++..++..++
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~ll 71 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALL 71 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHH
Confidence 456677777888888789998888888777777778888999999996 6777765 55666666666555
Q ss_pred HhcCch-------hHHHHHHHHHHHHHhhhccccccccccccCcc----chhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758 201 SFVGDN-------LVGAITCLTLAIAINAGTYTGFLSNHLDLSPN----FAGTLMGFTNGCANIASILGPLFVGFIVTDN 269 (318)
Q Consensus 201 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 269 (318)
...... .......+.++.+..+..-++..+...+.+++ ++-+...+.....|+|+.+++.+.+++.+..
T Consensus 72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 543211 11122233333333444445555555554442 2677888889999999999999999887442
Q ss_pred ---CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 270 ---TSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 270 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
+...+|..+|.+.+++++++.++....++
T Consensus 152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 152 GCFGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 12247999999999888888777665443
No 234
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.64 E-value=1.4e-07 Score=59.84 Aligned_cols=65 Identities=18% Similarity=0.239 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
.+-..+++.+.+...+..++|.|+++ .|+|+.++|.+.++..+..+++.+++|+++||.++++..
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 34466778888888999999999998 899999999999999999999999999999999999854
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.57 E-value=7.1e-06 Score=69.03 Aligned_cols=249 Identities=14% Similarity=0.049 Sum_probs=143.2
Q ss_pred cCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCCCh---
Q psy4758 4 WAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH---PFISL--- 76 (318)
Q Consensus 4 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 76 (318)
..|+++-.++.+...++.-+|-.++..+|-.+... ..+.+...++.. .+...+.+..+++|..++.. +...+
T Consensus 121 ~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl-~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~ 199 (412)
T PF01770_consen 121 VVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISL-ASVSLALLIALFLPMPKRSLFFHRKPPAEQD 199 (412)
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHcCCCCcccceeccCccccc
Confidence 35777888999999999999999999999888763 134555555543 33344455666777755421 11000
Q ss_pred ---hHhhhhhhccCc---ccccccc-----------CCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--
Q psy4758 77 ---EERIYIETSLVH---SSTVSSS-----------MKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV-- 137 (318)
Q Consensus 77 ---~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-- 137 (318)
.+.+...+..++ .++.++. ....+++..+||.++...+-+.+...+++-+..|.....++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~ 279 (412)
T PF01770_consen 200 ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP 279 (412)
T ss_pred cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 000000000000 0000000 012344556788898888888888999988888888888774
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA 217 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
.+-+....|..-+...+.+.++++..|++..++.+..-+ ......++.+..++++...++.+......+++.
T Consensus 280 ~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l--------~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~ 351 (412)
T PF01770_consen 280 SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL--------ALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFR 351 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH--------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 133344456677777788888888889886666554432 112333444444555555555443333334444
Q ss_pred HHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758 218 IAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
............-+...+..+.-|...|+.++...+-..+-..+
T Consensus 352 ~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~i 395 (412)
T PF01770_consen 352 SLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTLI 395 (412)
T ss_pred HHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEEE
Confidence 44444444444444445555568888888777666555544433
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.53 E-value=3.3e-09 Score=92.70 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=101.6
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHH
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAI 220 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 220 (318)
+.+...+...++..+|+++.|.++||+|||+.+ ..+..+..++.++..+.+ +.....+.-++.|.+.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL----------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccc----------ccccccccccccccccccccccccccccccccccccc
Confidence 356778888999999999999999999999988 667777777777777776 4443444455555554
Q ss_pred hhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 221 NAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
+ ........+..|..|++ |+...++.+....+|..++..+.-.+.+. .+...|+..+.+..+..++..+...+++
T Consensus 117 g-~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~Wr~~~~~~~~~~l~~~~~~~~~p 192 (451)
T PF00083_consen 117 G-GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-SDNWGWRILLIFGAIPSLLVLLLRFFLP 192 (451)
T ss_pred c-ccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 3 45566666777877766 99999999988888888777765544332 1124588888777777665555544444
No 237
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.53 E-value=7.1e-06 Score=67.23 Aligned_cols=166 Identities=11% Similarity=-0.072 Sum_probs=92.3
Q ss_pred HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
..+-+.-..|.=..+++ +|++..+++.++......+.+...+.|.++||+|||+.. +..+++..++.+.
T Consensus 47 ~~aDWLQGpY~Y~LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c----------l~~cily~~scl~ 115 (354)
T PF05631_consen 47 MAADWLQGPYLYALYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC----------LLFCILYSLSCLT 115 (354)
T ss_pred HHHHHhhcchhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH----------HHHHHHHHHHHHH
Confidence 33333333333334444 899999999999999999999999999999999999854 4444555555433
Q ss_pred HHhcCchhHHHHHHHHHHHHHhhhcccccccccccc----Cccc-hhhHHHHHHHHHH-HHHhHhhhhhheeeccCCCcc
Q psy4758 200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL----SPNF-AGTLMGFTNGCAN-IASILGPLFVGFIVTDNTSVS 273 (318)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~ 273 (318)
- ..++...+.+.-++-+.........-=..+..|. +|++ .+...+...+..| +-...+..++.++.|..+ .
T Consensus 116 k-~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~--~ 192 (354)
T PF05631_consen 116 K-HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG--F 192 (354)
T ss_pred H-hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC--C
Confidence 2 2233332444444444443332222211222221 2333 4555554442323 334444555555556532 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+...+|.....+.+++.++.....++
T Consensus 193 g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 193 GPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred CCcchHHHHHHHHHHHHHHHHhcccc
Confidence 34667877777777776665443333
No 238
>KOG2325|consensus
Probab=98.49 E-value=1.4e-06 Score=74.54 Aligned_cols=183 Identities=15% Similarity=0.155 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhh-hcCcchHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVA-KQILSPTVSRKMW 185 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~r~~~ 185 (318)
.++...+..++....+..+..-.-.|+++ +.+-+.+..|+..+...++..+++++.|+...|.+. |+.+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl--------- 105 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL--------- 105 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH---------
Confidence 34555555555555444444334445544 356677888999999999999999999999999885 5555
Q ss_pred HHHHHHHHHHHHHHHH---hcCchhH--HHHHHHHHHHHHhhhcccccccccccc-CccchhhHHHHHHHHHHHHHhHhh
Q psy4758 186 NTIGLWGSAAALVGLS---FVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDL-SPNFAGTLMGFTNGCANIASILGP 259 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~ 259 (318)
+.+.++..++.++.. ..+++.. +.+.-++.|.+ .......-.+..+. .+++|.++++..+...-+|..+||
T Consensus 106 -i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg--~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp 182 (488)
T KOG2325|consen 106 -IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG--VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGP 182 (488)
T ss_pred -HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC--cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhH
Confidence 677777777776663 2333222 22223333333 23334444444443 445588888887777777777777
Q ss_pred hhhheeeccC-------C--CccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758 260 LFVGFIVTDN-------T--SVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302 (318)
Q Consensus 260 ~~~g~l~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (318)
.+...+.... . .-..|..+-++.+.+.++..+......++..+
T Consensus 183 ~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 183 TIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 6544332210 0 01246667777777777777766665554433
No 239
>KOG3810|consensus
Probab=98.49 E-value=4.1e-06 Score=67.73 Aligned_cols=282 Identities=16% Similarity=0.100 Sum_probs=154.5
Q ss_pred cCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 4 WAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGW--PSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 4 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gW--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
..+|+++.++.|...+..-.|-..|..++..+... ..+ ...=.+ ...+...+.+...++|..+++.....++++..
T Consensus 122 ~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~-~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~ 199 (433)
T KOG3810|consen 122 KVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL-ETLSYTTLNYI-SLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS 199 (433)
T ss_pred ecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh-cccchhhhchh-hHHHHHHHHHHHhhCCCCchhhhhhcccccce
Confidence 46788999999999999999999998888888764 222 221122 22233333555566766553211111111111
Q ss_pred hhhccCcccccc--c-------cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh-cceeechhhhchH
Q psy4758 82 IETSLVHSSTVS--S-------SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL-QFDIKSNGFLSAA 151 (318)
Q Consensus 82 ~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~~~~~~~~~~~~ 151 (318)
..+..+.+++.+ + .-..++.+..+||.+....+-+.+...+++-...|......+.. .-....-|..=..
T Consensus 200 v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv 279 (433)
T KOG3810|consen 200 VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAV 279 (433)
T ss_pred eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHH
Confidence 111000000000 0 01123445567888888888888888888888888877776632 1111122334444
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758 152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN 231 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
..+.++++.+..|.+.-++.|..-+ .+.++.+..+..++.+...++.+......+++...............
T Consensus 280 ~tlLGa~~~~~~g~l~i~w~r~g~~--------ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 280 STLLGAIAALAAGYLNINWNRWGDL--------LLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred HHHHHHHHHHHHHheeeccchhhHH--------HHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 5666778888888887666665433 12444444444555555555544333333444444444444444455
Q ss_pred ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc-------cchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV-------SQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
..++..+.-|...|+..++.-+-..+-..+ ..|..+-. .-|..-|.+.+.+.+++........+
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~ 422 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR 422 (433)
T ss_pred HHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence 556666668999998777666555544433 44532211 23445567777777777655444433
No 240
>KOG0252|consensus
Probab=98.46 E-value=3e-07 Score=76.96 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=75.4
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--Cchh--H---HHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GDNL--V---GAIT 212 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~--~---~~~~ 212 (318)
+++...+.+.....++.++|+++.|++.||+|||+.. ...+++..++-++.... .+.. . +...
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY----------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~ 150 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY----------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFF 150 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh----------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHH
Confidence 4556667788888999999999999999999999977 33344444443333332 2222 1 3334
Q ss_pred HHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh
Q psy4758 213 CLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV 262 (318)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~ 262 (318)
-++++.+.+ +-+|+..+.++|...++ ||.-.+.....+..|...|..+.
T Consensus 151 R~~LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 151 RFLLGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred HHHhhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 455555543 46788888888887777 99988888777776655554443
No 241
>KOG2816|consensus
Probab=98.45 E-value=6e-06 Score=71.43 Aligned_cols=132 Identities=23% Similarity=0.241 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccc
Q psy4758 153 YLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNH 232 (318)
Q Consensus 153 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
++..++.++..|.++||+|||..+ ....+...+......+.. + +... ..-..+..........++.
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L----------~~~~~~~~l~~~~~~~~~--~-~~~~-~~~l~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVL----------LLPLFGTILPALCLLFQG--Y-WFFL-LLGLSGGFSAIFSVGFAYV 137 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhH----------HHHHHHHHHhHHHHHHHH--H-HHhh-hcccccchhhhhhhhhhhe
Confidence 677888899999999999999877 334444433333333322 2 2222 2222233334555666677
Q ss_pred cccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758 233 LDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302 (318)
Q Consensus 233 ~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (318)
.+...++ |....|+.+.....+..++|.+.+.+.+. .++..+|.+..+..++..+......++...
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~----~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF----LGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 7777766 99999999999999999999999999998 788899999999888888777766555443
No 242
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.38 E-value=1.3e-05 Score=69.91 Aligned_cols=145 Identities=17% Similarity=0.099 Sum_probs=92.0
Q ss_pred hhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHhhhc
Q psy4758 146 GFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGT 224 (318)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 224 (318)
++..++..+...+..++.|-++|+-++||.+ +.....+..++...+.+. ++.+.....+++++.......
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~---------l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~ 143 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRF---------LLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS 143 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHH---------HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 3556677778888899999999999988865 233334444444444443 344445555555555555556
Q ss_pred cccccccccccCccc-h--------------------------hhHHHHHHHHHHHHHhHhhhhhheeeccCCC----cc
Q psy4758 225 YTGFLSNHLDLSPNF-A--------------------------GTLMGFTNGCANIASILGPLFVGFIVTDNTS----VS 273 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~-~--------------------------~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~ 273 (318)
.....++..++.+++ + ++.++.-...+++|+.+.-.+.-.+....++ ..
T Consensus 144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~ 223 (477)
T PF11700_consen 144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTW 223 (477)
T ss_pred HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence 667777777777666 6 8999999999999988766654443322111 23
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+.+.++.+.++..++..+..++..++
T Consensus 224 ~~r~~~~~~a~ww~vfsiP~~~~~~~ 249 (477)
T PF11700_consen 224 AIRVAFLIVALWWLVFSIPLFLWLPD 249 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56777777777655555444444433
No 243
>KOG0253|consensus
Probab=98.34 E-value=5.4e-06 Score=67.82 Aligned_cols=158 Identities=10% Similarity=0.048 Sum_probs=108.6
Q ss_pred HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
.....+..-+.+..|.+..+..++......+..+++..+|.++|++|||+.. ........+.-.+-...+
T Consensus 95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f----------~~T~l~t~v~~~is~~sp 164 (528)
T KOG0253|consen 95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF----------NLTFLVTGVFGVISGASP 164 (528)
T ss_pred HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh----------hhhHHHHHHHHHhhcCCC
Confidence 3444455556666888888999999999999999999999999999999976 455555555555555555
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
+..++.+.-...+.+.++ .+.....+..-.+..+|+.-+-+. ....+|..+...+.-..+.+ .+|++-+.....
T Consensus 165 nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~----~gwr~~l~~~~~ 238 (528)
T KOG0253|consen 165 NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN----FGWRYLLFTSST 238 (528)
T ss_pred CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHh
Confidence 555444545555555544 333344444444444477766665 77778888777776666666 689988888776
Q ss_pred HHHHHHHHHHhhcc
Q psy4758 285 IFFFGNLIFLIFGT 298 (318)
Q Consensus 285 ~~~~~~~~~~~~~~ 298 (318)
...+.+.+..+.++
T Consensus 239 pl~~~a~f~~w~~E 252 (528)
T KOG0253|consen 239 PLMFAARFLVWVYE 252 (528)
T ss_pred HHHHHHHHHhhccc
Confidence 66666666655544
No 244
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.31 E-value=1.9e-05 Score=61.57 Aligned_cols=102 Identities=12% Similarity=0.034 Sum_probs=59.8
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHH---hC-CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhh
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLL---AG-SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIE 83 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l---~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (318)
|+|+....+...+.++|.++.-..--.- .+ ..-.|++++.+.+++.++-.++..++ +++-+....++++.+.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if--Gk~fd~~~~~~k~~k~-- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF--GKNFDIYSPKEKQEKE-- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccccCcccccccc--
Confidence 6778888888888888887764432111 11 01469999999998887765554444 3221111111000000
Q ss_pred hccCccccccccCCcchhhhhcchhHHHHHHHHHHHH
Q psy4758 84 TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120 (318)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (318)
+...+.+...++++|++..|...+.+....
T Consensus 78 -------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 -------NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred -------cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 000334577889999999998877766543
No 245
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.30 E-value=4.3e-06 Score=72.41 Aligned_cols=159 Identities=22% Similarity=0.205 Sum_probs=98.6
Q ss_pred hhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc---hh
Q psy4758 131 PSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD---NL 207 (318)
Q Consensus 131 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~ 207 (318)
..++++++|+++.+...+.....+...+ .++.|.++|-+.-... .||+.+.++.++..++...+...+. ..
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~-----rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGY-----RRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCC-----cchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 4466777999999988877766666555 6788999998741110 1233456676666555555555443 12
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccC---ccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758 208 VGAITCLTLAIAINAGTYTGFLSNHLDLS---PNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA 284 (318)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (318)
.....++++........-...-+...|.. |+.+|.-.+.......+|+.++..+.|.+.+. .+++..|.+.+.
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~----~~~~~~f~i~~~ 162 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS----FGPQGVFLISAA 162 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc----CCCeEEehHHHH
Confidence 12222222222222222233333333333 33378888888899999999999999999988 566777777777
Q ss_pred HHHHHHHHHHhhccc
Q psy4758 285 IFFFGNLIFLIFGTS 299 (318)
Q Consensus 285 ~~~~~~~~~~~~~~~ 299 (318)
+..+..+..+.+.++
T Consensus 163 ~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 163 LPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHhhhh
Confidence 766666555555554
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.22 E-value=4.7e-05 Score=64.12 Aligned_cols=241 Identities=14% Similarity=0.080 Sum_probs=111.3
Q ss_pred hHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhc-cCcc-
Q psy4758 12 RLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETS-LVHS- 89 (318)
Q Consensus 12 ~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 89 (318)
...+-+.++.+.++++|+..-..+.....+-|..+.+...+.++..+..++.+|+++.+.+..+.++.+..+++ ...+
T Consensus 143 ~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (402)
T PF02487_consen 143 SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESET 222 (402)
T ss_pred cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccccccccccc
Confidence 45778888888888888887766665324558888888888777656666666654332211111110000000 0000
Q ss_pred --ccccccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcce-eechhhhchHHHHHHHHHHHHHH
Q psy4758 90 --STVSSSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFD-IKSNGFLSAAPYLAQWILILVFS 164 (318)
Q Consensus 90 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g 164 (318)
.+.....+..+++-++. |..+...+-.+..++..|.++ ...|...-.....+ ..+.-++...+.++-++++--..
T Consensus 223 ~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~ 302 (402)
T PF02487_consen 223 SESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLP 302 (402)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhccee
Confidence 00001112223322221 222223333333334444332 33333322111111 22333444444444444432211
Q ss_pred HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH---HHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758 165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL---VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241 (318)
Q Consensus 165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
.+ |+ |++. ...+.-.+-.+.+ ..+.+.++.+...+.++..|...+.........+..+..+++|.
T Consensus 303 ~~--ri--r~lw--------ils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~RE 370 (402)
T PF02487_consen 303 FF--RI--RRLW--------ILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDRE 370 (402)
T ss_pred ee--eh--hhHH--------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHH
Confidence 11 12 2211 1111111111111 11222333332334444445544445555566666777777799
Q ss_pred hHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 242 TLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 242 ~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
-++|.......+|..++..++-.
T Consensus 371 Fslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 371 FSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999888888877766533
No 247
>KOG2563|consensus
Probab=98.19 E-value=3.2e-05 Score=65.03 Aligned_cols=156 Identities=13% Similarity=0.071 Sum_probs=91.9
Q ss_pred hhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-----c
Q psy4758 131 PSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-----D 205 (318)
Q Consensus 131 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~ 205 (318)
..+.++.+| +...+-++..++.+.+++..+.+-|+.||+|-|... .++..+..++..+=.... +
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~----------llgt~ln~iGa~Ir~iss~p~v~~ 136 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL----------LLGTVLNGIGAWIRLISSLPFVPP 136 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH----------HHHHHHHHHHHHHhhhccCccccc
Confidence 345555566 556666788888899999999999999999999876 455555555544322222 2
Q ss_pred hhHHHHHHHHHHHHHhhhcccc-----ccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCC--ccchHH-
Q psy4758 206 NLVGAITCLTLAIAINAGTYTG-----FLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQT- 277 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~--~~~~~~- 277 (318)
..+- .+...|....+...+. .-....-.+|++|+++..+..+...+|.+++..+-..+..+..+ ...|..
T Consensus 137 ~f~~--~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~ 214 (480)
T KOG2563|consen 137 LFRR--PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFF 214 (480)
T ss_pred cchh--hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHH
Confidence 2211 1222222222211111 11122234566699999999998999999999998888877521 234433
Q ss_pred -HHHHHHHHHHHHHHHHHhhccc
Q psy4758 278 -IFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
.|+...++..+-+++..+.+++
T Consensus 215 ~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 215 TLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444444444344444433
No 248
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.18 E-value=3.5e-06 Score=60.63 Aligned_cols=64 Identities=23% Similarity=0.425 Sum_probs=55.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGAN 66 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~ 66 (318)
.|.+|+++|++.+++.+....+|..+++.+++.+.+. .+|++.|++.+...++..+..++..||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 4788999999999999999999999999999999987 899999999888877776666665554
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.17 E-value=3.4e-05 Score=64.44 Aligned_cols=123 Identities=18% Similarity=0.121 Sum_probs=77.7
Q ss_pred hhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHh-----hhcCcchHHHHHHHHHHHHHHHHHHHHHHH-----hcC
Q psy4758 135 NSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIV-----AKQILSPTVSRKMWNTIGLWGSAAALVGLS-----FVG 204 (318)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~ 204 (318)
..+++.+..-.+.+.+...+.+. .++..|..+|+.+ ||..... .+..+...+..+.+ ...
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~---------~G~~~~~~g~~~ap~a~~~l~~ 76 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIW---------GGTLLQAGGLAIAPFALLLLAE 76 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhH---------HHHHHHHHHHHHHHHHHHHHcc
Confidence 34478887777777777666655 4888999999998 7766533 33333332222211 112
Q ss_pred -------chhH----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 205 -------DNLV----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 205 -------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
+.+. .......++.+... ......+...|..|++ |+++.++...+.-+|..++..+.|.+.|.
T Consensus 77 ~~~~~~~~~~~g~~~a~l~F~l~G~G~~~-s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 77 SGQQSSGPFWLGLALAALAFLLYGLGVHA-SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred cccccccccHHHHHHHHHHHHHHHhhHhH-hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 1211 12222233333333 3344555566666665 99999999999999999999999999887
No 250
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.16 E-value=0.00086 Score=58.32 Aligned_cols=167 Identities=8% Similarity=-0.020 Sum_probs=99.5
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCch----HHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWP----SIFYVSGAVAIVWAAAWCYIGANSPAQ 70 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr----~~f~~~~~~~~~~~~~~~~~~~~~~~~ 70 (318)
+|.++.+|-.|..++...+.++|.++++.+..++.+ ....|. ..+.+.++.+++. ..+.+.+.+...+
T Consensus 155 ndi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~ 233 (472)
T TIGR00769 155 NQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLT 233 (472)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccC
Confidence 688888999999999999999999999999988873 112452 2334444333333 3334444332211
Q ss_pred CCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec----hh
Q psy4758 71 HPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS----NG 146 (318)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~~ 146 (318)
++...+.++ .+++++.+.....+++.++|+|..+.+++...++..+.+.+..-.-..+.+.+ -++.+ .|
T Consensus 234 ~~~~~~~~~------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g 306 (472)
T TIGR00769 234 DPRSYNPAL------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMG 306 (472)
T ss_pred Cccccchhh------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
Confidence 111111110 00011111233456778899999999888888887777777655555555433 23322 23
Q ss_pred hhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 147 FLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 147 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
......++..++..++.+++.+|+|-+...
T Consensus 307 ~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a 336 (472)
T TIGR00769 307 DFSTWTGVVSVTMMLLSGNVIRKYGWLTAA 336 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 334444555666667779999999987644
No 251
>KOG3098|consensus
Probab=97.96 E-value=0.00031 Score=60.38 Aligned_cols=152 Identities=15% Similarity=0.087 Sum_probs=84.2
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc--ee-echhhhchHHHHHHHHHHHHHHHhHHHHh---hhcC
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQF--DI-KSNGFLSAAPYLAQWILILVFSWLADYIV---AKQI 175 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---~~~~ 175 (318)
+++++|+.+.+....+..+....-.....|..+.-.... +. ...+......+++.+++....+.+.+|.. ++..
T Consensus 235 ~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~ 314 (461)
T KOG3098|consen 235 KLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT 314 (461)
T ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc
Confidence 456677777776666555555555556666665443222 22 22334445556677777777777776654 4443
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc-Cchh---------------H--HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758 176 LSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNL---------------V--GAITCLTLAIAINAGTYTGFLSNHLDLSP 237 (318)
Q Consensus 176 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
+ .++..+..+..++.... +.+. . ..++.+..|.+ -.............+.|
T Consensus 315 ~----------~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~-D~~~~t~~~~ii~~~~~ 383 (461)
T KOG3098|consen 315 V----------LIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG-DACFNTQRYVIIALLYP 383 (461)
T ss_pred h----------hHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH-HHHHHHHHHHHHHHHhc
Confidence 3 44444444433333221 1100 1 22222333333 23344556667777789
Q ss_pred cchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758 238 NFAGTLMGFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 238 ~~~~~~~g~~~~~~~~g~~~~~~~~g~ 264 (318)
++|..+.++.-.-+.+++.++-.....
T Consensus 384 ~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 384 DDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999988888887766655433
No 252
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.78 E-value=0.0012 Score=55.83 Aligned_cols=163 Identities=13% Similarity=0.128 Sum_probs=106.5
Q ss_pred HHHHhhhhhhhhhh-hcceeechhhhchHHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 124 WTLLTEMPSYINSV-LQFDIKSNGFLSAAPY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS 201 (318)
Q Consensus 124 ~~~~~~~p~~l~~~-~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 201 (318)
-....++..|+.+. .|++..+...-.-+.. -..+..-+....+.|.++.|..+ ++..+...+...++.
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi----------il~~~~~i~t~~lll 89 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI----------ILQALSYIITWLLLL 89 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH----------HHHHHHHHHHHHHHH
Confidence 35568888888886 8898888764433333 34556667778999999999866 556555566666666
Q ss_pred hcCchhHHHHHHHHHHHHHhhhcccccccccc-ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHH
Q psy4758 202 FVGDNLVGAITCLTLAIAINAGTYTGFLSNHL-DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFL 280 (318)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 280 (318)
+.++-..+.+.-++.|..... -....+++- .+.+++.-++.+......-+|.+++..++-.+....+ .+|....+
T Consensus 90 ~~~sv~~mq~~q~~yg~~~a~--evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~--~sy~~L~~ 165 (412)
T PF01770_consen 90 FGTSVLAMQLMQFFYGLATAA--EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG--VSYFQLNY 165 (412)
T ss_pred HHCcHHHHHHHHHHHHHHHHH--HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHH
Confidence 665554444444555544433 233333332 3455557777888888777777777777776665422 57787877
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q psy4758 281 IAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~ 300 (318)
+......++.+..+++++.+
T Consensus 166 isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 166 ISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHcCCCC
Confidence 77777777777777776544
No 253
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.75 E-value=0.003 Score=54.33 Aligned_cols=180 Identities=12% Similarity=0.146 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT 187 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 187 (318)
..+.+....++..+.--...+-.|.++.+.+.-+-.-.+.+...-.+..++.++..|...||..|.+..... ....-
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~---l~~Qn 79 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS---LVVQN 79 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH---HHHHH
Confidence 345677788888888888888899999886554544455555556677788888889999999988876432 11223
Q ss_pred HHHHHHHHHHHHHHhcCc-----hhH-HHHH--HHHHHHHHhhhccccccc-------cccccCccchhhHHHHHHHHHH
Q psy4758 188 IGLWGSAAALVGLSFVGD-----NLV-GAIT--CLTLAIAINAGTYTGFLS-------NHLDLSPNFAGTLMGFTNGCAN 252 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~-----~~~-~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~ 252 (318)
.+..+.++.+..+..... ... .... ...++...-........+ ...+-.++......+.+.-+-.
T Consensus 80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL 159 (432)
T PF06963_consen 80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL 159 (432)
T ss_pred HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence 333333333333332222 121 1111 111111111111111111 1111123335666666666666
Q ss_pred HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 253 IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 253 ~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+.-.++|.+.|.+.+. .++.....+.++..+++.+.=+
T Consensus 160 ~ckllaPl~vG~l~t~----~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTF----ASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHHHhhc----cCHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999987 5777788888888777776643
No 254
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.73 E-value=0.0019 Score=56.19 Aligned_cols=147 Identities=13% Similarity=0.110 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce-----eechhhhchHHHHHHHHH-HHHHHHhHHHHhhhcCcchHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD-----IKSNGFLSAAPYLAQWIL-ILVFSWLADYIVAKQILSPTV 180 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~g~~~~~~~~~ 180 (318)
|.++...+..++..+.++.. --++|....+ .+...++-....+...+. .++.+++++|+++++.+..
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~-- 79 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYT-- 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHH--
Confidence 34555555555555544433 2234545553 345556666555554444 7889999999999997732
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHhcCch-------------------------hHHHHHHHHHHHHHhhhcc-cccccc
Q psy4758 181 SRKMWNTIGLWGSAAAL---VGLSFVGDN-------------------------LVGAITCLTLAIAINAGTY-TGFLSN 231 (318)
Q Consensus 181 ~r~~~~~~~~~~~~~~~---~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~ 231 (318)
+....+....+ ++.+..+.. .+......+..-..+.... ...+..
T Consensus 80 ------~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 80 ------VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred ------HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211111 111111110 1111111122222222233 366677
Q ss_pred ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
++|....+ ..+-.++.....++|..+++.+..++.
T Consensus 154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77877665 889999999999999999999988876
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.65 E-value=0.0002 Score=45.87 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=61.4
Q ss_pred HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
..+-+.+...+|...+| .++|..+.+++.+...++..+|++...++.++.++++.+ ..+++...+....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~----------~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLL----------RAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH----------HHHHHHHHHHHHH
Confidence 34556777788888777 899999999999999999999999999998886666655 5677777777777
Q ss_pred HHhcCchh
Q psy4758 200 LSFVGDNL 207 (318)
Q Consensus 200 ~~~~~~~~ 207 (318)
..+.++..
T Consensus 74 ma~~~~~~ 81 (85)
T PF06779_consen 74 MALTHSFW 81 (85)
T ss_pred HHHHhchH
Confidence 77665543
No 256
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.64 E-value=0.00091 Score=55.17 Aligned_cols=146 Identities=17% Similarity=0.092 Sum_probs=91.5
Q ss_pred CCCCCchhHHHHHH-hhHhhHHHhHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758 5 APPMERARLFSFAF-SGTQFGNLVTLPVAGLLAGSPWG--WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY 81 (318)
Q Consensus 5 ~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~g--Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (318)
+|++..+..++... ...++-.+.+..++.++.+. .+ -..+|....++.++.+++....-+|+..+.....+..
T Consensus 155 ~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~--- 230 (354)
T PF05631_consen 155 FPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-FGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLS--- 230 (354)
T ss_pred CChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-hCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchH---
Confidence 34444555555444 34555567777777777765 44 4889988877777766666665566543322111111
Q ss_pred hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758 82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI 160 (318)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (318)
+..+..++.+++||+++.+.+...+.-...+.+. .|.|..-.+ + ...--|++++...++.++|+
T Consensus 231 ------------~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS 295 (354)
T PF05631_consen 231 ------------GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGS 295 (354)
T ss_pred ------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHH
Confidence 1112345677889999999888888877777765 455555422 1 22347888888888888888
Q ss_pred HHHHHhHHH
Q psy4758 161 LVFSWLADY 169 (318)
Q Consensus 161 ~~~g~l~dr 169 (318)
.+..++..+
T Consensus 296 ~lf~~l~s~ 304 (354)
T PF05631_consen 296 SLFSRLLSK 304 (354)
T ss_pred HHHHHHHhC
Confidence 888765543
No 257
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.61 E-value=0.002 Score=56.39 Aligned_cols=167 Identities=11% Similarity=0.071 Sum_probs=99.9
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHH----HHHHHHHHHHHHHhcCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSG----AVAIVWAAAWCYIGANSPA 69 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~----~~~~~~~~~~~~~~~~~~~ 69 (318)
+|.++.+|-.|..++...+.++|.++++.+..++.+ ....|...+.... +.+++. ......+.+...
T Consensus 170 N~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i-~~~~~~~~~~vl 248 (491)
T PF03219_consen 170 NEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVI-ILLYRYMNKNVL 248 (491)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHcc
Confidence 577888899999999999999999999999988887 1135665443222 222222 222333332211
Q ss_pred CCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec----h
Q psy4758 70 QHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS----N 145 (318)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~ 145 (318)
+.+...++++. ++.++.+..-..+++.++|+|.+..+++...++..+.+.+....-..+++.+ -++.+ .
T Consensus 249 ~~~~~~~~~~~------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~-~~~~~ysafm 321 (491)
T PF03219_consen 249 TDPRFYPSAKK------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLY-PDPNDYSAFM 321 (491)
T ss_pred Cccccchhhhc------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCchHHHHHH
Confidence 11110000000 0001111233456777889999999999888888888877766655555533 23322 2
Q ss_pred hhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 146 GFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
|......++..++..++++.+.+|+|-+...
T Consensus 322 G~~~~~tGivtii~~~l~~~iir~~GW~~~A 352 (491)
T PF03219_consen 322 GKFSSWTGIVTIIMMFLSSNIIRRFGWRTAA 352 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3344555666677778889999998887654
No 258
>PRK03612 spermidine synthase; Provisional
Probab=97.43 E-value=0.0046 Score=54.93 Aligned_cols=146 Identities=11% Similarity=0.061 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758 114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS 193 (318)
Q Consensus 114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 193 (318)
+..++..++...+.....-.+...+|-+....+.+.+.+..+..+|+.+++++.++..++..... ..++++..
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e-------~~i~l~~~ 93 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVE-------LLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH-------HHHHHHHH
Confidence 34444455555555555556666678888888888888888888888888877644333321100 01111111
Q ss_pred HHHHH---HHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 194 AAALV---GLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 194 ~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
....+ ...+...... .....+..+ ...+...|...-...+...++.+...|-......+|+.+|+.+.+++.-
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIG-LLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 11111 1111100011 111122222 2233333443333333333345677788888899999999998887654
No 259
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.43 E-value=0.0026 Score=52.11 Aligned_cols=151 Identities=22% Similarity=0.248 Sum_probs=90.3
Q ss_pred HHHHHHhhhhhhhhhhhccee--echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758 122 GYWTLLTEMPSYINSVLQFDI--KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG 199 (318)
Q Consensus 122 ~~~~~~~~~p~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 199 (318)
.........+.+..+ .+.+. ...+.......+...++.++.|++.||.|+|+.+ ..+......+...
T Consensus 17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~ 85 (338)
T COG0477 17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLL 85 (338)
T ss_pred hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHH
Confidence 333444455555555 44444 3677888888888888889999999999888544 3333222333333
Q ss_pred HHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHH-HHHHHHhHhhhhhheeeccCCCccc
Q psy4758 200 LSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNG-CANIASILGPLFVGFIVTDNTSVSQ 274 (318)
Q Consensus 200 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~ 274 (318)
.....+ ... ........+.+. +...+.......+..|+ +|+...+.... ...++..++|.+.+.+.+. ...+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGG-GGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA--LLWG 162 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc
Confidence 333333 122 222222222322 24455566666677775 58888888877 5777888888777666555 3357
Q ss_pred hHHHHHHHHHHH
Q psy4758 275 WQTIFLIAAAIF 286 (318)
Q Consensus 275 ~~~~~~~~~~~~ 286 (318)
|+..+.......
T Consensus 163 ~~~~~~~~~~~~ 174 (338)
T COG0477 163 WRAAFLLAALLG 174 (338)
T ss_pred hHHHHHHHHHHH
Confidence 777555555444
No 260
>KOG3574|consensus
Probab=97.42 E-value=0.0018 Score=53.60 Aligned_cols=165 Identities=12% Similarity=0.005 Sum_probs=94.4
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758 99 PWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178 (318)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 178 (318)
-++++++-|.+..........-.++.+-....+.-+.| +|.+..+-+....+..-.+++.....|++... .|++. .
T Consensus 257 ~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~-~ 332 (510)
T KOG3574|consen 257 LLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLN-V 332 (510)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcch-H
Confidence 35567777888888888888888888888888888888 89999888776644444444444444443321 11111 1
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHhcCc---hhH-----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHH
Q psy4758 179 TVSRKMWN-TIGLWGSAAALVGLSFVGD---NLV-----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTN 248 (318)
Q Consensus 179 ~~~r~~~~-~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~ 248 (318)
- .|.... ..+......-......... ... +.+..-.+..++.........+..+.+.+.. -|+.+.+.|
T Consensus 333 ~-lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLN 411 (510)
T KOG3574|consen 333 F-LKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLN 411 (510)
T ss_pred H-HHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHH
Confidence 0 011111 1111122222222222221 111 1111122233333333444445555666666 999999999
Q ss_pred HHHHHHHhHhhhhhheeecc
Q psy4758 249 GCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 249 ~~~~~g~~~~~~~~g~l~~~ 268 (318)
+..|+|+-.-..++.++.|.
T Consensus 412 TLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 412 TLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred HHHHhcCCcHHHHHHHhccc
Confidence 99999999888888888875
No 261
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.00098 Score=56.01 Aligned_cols=164 Identities=19% Similarity=0.098 Sum_probs=96.7
Q ss_pred HHhhhhhhhhhhhcc---ee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758 126 LLTEMPSYINSVLQF---DI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV 198 (318)
Q Consensus 126 ~~~~~p~~l~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~ 198 (318)
..+++|.|+++..+- ++ ...++..++..+...+-+++.|.++|+.|+||.. ......+..+...
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~---------~~~f~~i~i~~~~ 104 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKF---------FGFFTAIGIISTF 104 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchH---------HHHHHHHHHHHHH
Confidence 345677777765443 33 3345566777777788889999999999999865 2344455555566
Q ss_pred HHHhcCc--hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh----------hee
Q psy4758 199 GLSFVGD--NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV----------GFI 265 (318)
Q Consensus 199 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~----------g~l 265 (318)
.+.+.++ ++...+.++.+.............+...++.+++ .++.++.....+++|+.+.-.+. +.-
T Consensus 105 ~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~ 184 (438)
T COG2270 105 LLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGIT 184 (438)
T ss_pred HHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhccccccee
Confidence 6666665 3333333444444444455566667777666665 66667766666777665433331 110
Q ss_pred ec----cCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758 266 VT----DNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298 (318)
Q Consensus 266 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (318)
.. ...+...-+.++.+.++-.++..+-.+...+
T Consensus 185 ~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~ 221 (438)
T COG2270 185 IILLGLPPADGEDVRITGLLAALWWLLFALPMILNVH 221 (438)
T ss_pred EEeeccCccccccchhHHHHHHHHHHHHHhHHHhccc
Confidence 00 0122355677777777776666555554433
No 262
>KOG3626|consensus
Probab=97.35 E-value=0.0026 Score=57.63 Aligned_cols=168 Identities=14% Similarity=0.187 Sum_probs=111.3
Q ss_pred HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG 204 (318)
Q Consensus 125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
++..-.-+-+++.++++..+.|++.+..-++..+...+..+...|..|.+.+ .+++++.+++.++..+.+
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I----------g~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI----------GIGLVLMGLGSLLFALPH 183 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee----------eechhHHHHHHHHHhChH
Confidence 5554455556777999999999999999999999999999999999888877 456666655555443210
Q ss_pred -----------------------------------------------chhHHHHHHHHHHHHHh----hhcccccccccc
Q psy4758 205 -----------------------------------------------DNLVGAITCLTLAIAIN----AGTYTGFLSNHL 233 (318)
Q Consensus 205 -----------------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 233 (318)
........+++++.... ....+.-..++.
T Consensus 184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD 263 (735)
T KOG3626|consen 184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID 263 (735)
T ss_pred HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence 00001222233332222 234455567777
Q ss_pred ccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC------------C---ccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 234 DLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT------------S---VSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 234 ~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
|...++ -....|+..++..+|-++|=.+++....... | ...|...|++.+.+.++..+.+++++
T Consensus 264 Dnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP 343 (735)
T KOG3626|consen 264 DNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP 343 (735)
T ss_pred ccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 777666 7888899888888887777766665542211 1 13577778888888888888888887
Q ss_pred ccccC
Q psy4758 298 TSEVQ 302 (318)
Q Consensus 298 ~~~~~ 302 (318)
++.++
T Consensus 344 k~lp~ 348 (735)
T KOG3626|consen 344 KELPK 348 (735)
T ss_pred ccCcc
Confidence 65543
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.32 E-value=0.019 Score=49.47 Aligned_cols=167 Identities=14% Similarity=0.057 Sum_probs=93.7
Q ss_pred CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC---------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG---------WPSIFYVSGAVAIVWAAAWCYIGANSPAQHP 72 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g---------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (318)
+|.+..+|-.|..+.++.+.+++..++..+..++.++... -+..+.+.+..++++..+..+.=+...+++.
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~ 253 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPL 253 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence 3566778888999999999999999999999998874122 3445555555555543333332222222211
Q ss_pred CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeech---hhhc
Q psy4758 73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSN---GFLS 149 (318)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~---~~~~ 149 (318)
...+..++ ++.++.+-.-..+.+.++|+|..+.+.+...+++.+.+.+....-.-.++.+-.+.+.. |...
T Consensus 254 f~~~~~~k------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~ 327 (509)
T COG3202 254 FYLRAKKK------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQ 327 (509)
T ss_pred hhHHHhcc------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHH
Confidence 11000000 00000002223456677888999988888888888877765443333333222222222 2233
Q ss_pred hHHHHH-HHHHHHHHHHhHHHHhhhc
Q psy4758 150 AAPYLA-QWILILVFSWLADYIVAKQ 174 (318)
Q Consensus 150 ~~~~~~-~~~~~~~~g~l~dr~g~~~ 174 (318)
...++. .++...+++.+.+|.|-..
T Consensus 328 ~~tgvv~~v~~~~~~s~~ir~~GW~~ 353 (509)
T COG3202 328 IWTGVVSLVVFLFPGSNLIRRVGWFT 353 (509)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhHHH
Confidence 344444 4555667888888888654
No 264
>KOG4332|consensus
Probab=97.18 E-value=0.03 Score=44.51 Aligned_cols=179 Identities=17% Similarity=0.079 Sum_probs=85.9
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHHH-HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758 100 WKAILTSLPVWAVLITHLCQNWGYWT-LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 178 (318)
.+.+..++++.++...-.+.-...+. ...|.|..-.+..+.+ -|.+++...+..++|+-+..++..|-..|.--
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~-- 315 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSPKVES-- 315 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCcccch--
Confidence 34455666666554444444444443 3455554433323322 35667777777777777766665554333210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----cCch--hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH
Q psy4758 179 TVSRKMWNTIGLWGSAAALVGLSF----VGDN--LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA 251 (318)
Q Consensus 179 ~~~r~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 251 (318)
.+.+.+.+.++.+.+... .++. ...-.+.++..-.+.+..++...-.-.+.-|++ |++.+-....--
T Consensus 316 ------ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPL 389 (454)
T KOG4332|consen 316 ------YMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPL 389 (454)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechh
Confidence 112333333333222211 1111 112333344444445556666666666667776 888776665555
Q ss_pred HHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758 252 NIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 252 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
++...++-+. .+..+...+-+..|-++.+...+..+..
T Consensus 390 nifvClvLyn----lh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 390 NIFVCLVLYN----LHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred hHhhhhhhee----cccccCccccchhhhhhHHHHHHHHHHH
Confidence 5544433222 1111111334566666666666554443
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.16 E-value=5.8e-05 Score=67.02 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=0.3
Q ss_pred HHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 121 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
...+++..-.-.-++.+++++..++|++.+..-++.++..++..++.+|..|.|.+ ..+.++.+++.+++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi----------g~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI----------GIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee----------eecHHHHHHHHHHH
Confidence 44444444444455667999999999999999999999999999999987777655 55666666665554
Q ss_pred HhcCc-------------------------------------------h--hHHHHHHHHHHHHHhh----hcccccccc
Q psy4758 201 SFVGD-------------------------------------------N--LVGAITCLTLAIAINA----GTYTGFLSN 231 (318)
Q Consensus 201 ~~~~~-------------------------------------------~--~~~~~~~~~~~~~~~~----~~~~~~~~~ 231 (318)
...+- . .......++++....+ ..++.-.++
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 32110 0 0012233333333322 234455567
Q ss_pred ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----C----------Cc----cchHHHHHHHHHHHHHHHHH
Q psy4758 232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN----T----------SV----SQWQTIFLIAAAIFFFGNLI 292 (318)
Q Consensus 232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~----------~~----~~~~~~~~~~~~~~~~~~~~ 292 (318)
+.|..+++ .+...|+......+|-++|=.+++...... . +. ..|-..|++.+.+.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766655 778888888888888777777777665321 0 01 24566666677777777776
Q ss_pred HHhhccccc
Q psy4758 293 FLIFGTSEV 301 (318)
Q Consensus 293 ~~~~~~~~~ 301 (318)
.+.++|+-+
T Consensus 246 l~~FPk~lp 254 (539)
T PF03137_consen 246 LFFFPKKLP 254 (539)
T ss_dssp ---------
T ss_pred HHcCCccCC
Confidence 666665433
No 266
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.15 E-value=0.0015 Score=54.12 Aligned_cols=87 Identities=17% Similarity=0.202 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCC------------ccch
Q psy4758 209 GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS------------VSQW 275 (318)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~------------~~~~ 275 (318)
..+..++++.+. ....+..+.+..++.++ ++++.+++...+..+|..++|.+.+.+...... ..+|
T Consensus 13 ~l~~~f~~g~G~-~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (310)
T TIGR01272 13 FLGALFVLASGL-TILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKV 91 (310)
T ss_pred HHHHHHHHHhhH-HHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHH
Confidence 334444444444 34556666677777665 499999999999999999999999988743210 1367
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4758 276 QTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~ 296 (318)
+.+++..+.+.++..+.....
T Consensus 92 ~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 92 HTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 888886666655555444444
No 267
>KOG0637|consensus
Probab=97.11 E-value=0.0016 Score=55.21 Aligned_cols=71 Identities=17% Similarity=0.142 Sum_probs=48.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeec---------------hh-hhchHHHHHHHHHHHHHHHhHH
Q psy4758 106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKS---------------NG-FLSAAPYLAQWILILVFSWLAD 168 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~---------------~~-~~~~~~~~~~~~~~~~~g~l~d 168 (318)
.|..+.+++...+...+++.+..|...++-+ .++-++.. .| +=+.+..+...+.+....++.|
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678888888999888888888888777743 34433221 11 2234455666777788889999
Q ss_pred HHhhhcCc
Q psy4758 169 YIVAKQIL 176 (318)
Q Consensus 169 r~g~~~~~ 176 (318)
|+|.|+.+
T Consensus 358 ~~g~r~~y 365 (498)
T KOG0637|consen 358 KFGTRKRY 365 (498)
T ss_pred hcCcceEE
Confidence 99955544
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.10 E-value=0.014 Score=42.70 Aligned_cols=106 Identities=19% Similarity=0.107 Sum_probs=67.0
Q ss_pred hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758 148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
-.++......+.+++.+.+.+++|.|+.+ +++.+...+....... ++.........+.+.+. +..+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm----------~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~-a~lW~a 109 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSM----------ILGSLGYAIYIASFFY-PNSYTLYPASALLGFGA-ALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHH----------HHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhh-HHhhHh
Confidence 34555667788888899999999999876 5555555544433332 23332344444444443 345555
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI 265 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l 265 (318)
...++.+...++ +++-.++.-.+.+.+..+|..+.-.+
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555565666555 99999998888888777777664443
No 269
>KOG0637|consensus
Probab=97.05 E-value=0.0037 Score=53.15 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=100.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSR 182 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r 182 (318)
+.........+...+++..=.+|+|+|+++ .|.+....+......-+.+.+.+++.|..+|| +||||.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf------ 104 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPF------ 104 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccch------
Confidence 344555556666677777778999999999 89999999888888888899999999999995 6777765
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchh------------HHHHHHHHHHHHHhh----hccccccccccccCccc-hhh-HH
Q psy4758 183 KMWNTIGLWGSAAALVGLSFVGDNL------------VGAITCLTLAIAINA----GTYTGFLSNHLDLSPNF-AGT-LM 244 (318)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~-~~ 244 (318)
+..+.....++++++.+..+.. ...+....+++...- ......-++..|+..++ +.+ +.
T Consensus 105 ---I~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~An 181 (498)
T KOG0637|consen 105 ---ILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRAN 181 (498)
T ss_pred ---HHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccc
Confidence 4556666667777666543311 133334444433222 22333444555555433 555 99
Q ss_pred HHHHHHHHHHHhHhhhhhhe
Q psy4758 245 GFTNGCANIASILGPLFVGF 264 (318)
Q Consensus 245 g~~~~~~~~g~~~~~~~~g~ 264 (318)
+....+..+|+.+|-.+.++
T Consensus 182 s~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 182 SVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred hhHHHHHHhcceeeeecccc
Confidence 99999999998887777653
No 270
>KOG3762|consensus
Probab=97.00 E-value=0.00033 Score=60.46 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcc
Q psy4758 115 THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILS 177 (318)
Q Consensus 115 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 177 (318)
.+++....+..+...++.|..+ +|+++.+.|.++..--+..+++.+++|.++||+.++|.+.
T Consensus 19 f~~~~~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~ll 80 (618)
T KOG3762|consen 19 FYLFFGARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLL 80 (618)
T ss_pred eeeeeeecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchh
Confidence 4445555666778889999998 9999999999999999999999999999999999999873
No 271
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.99 E-value=0.02 Score=49.52 Aligned_cols=160 Identities=18% Similarity=0.189 Sum_probs=89.4
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcC-cc---
Q psy4758 102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI-LS--- 177 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~--- 177 (318)
+++|-|++..+.+..+..-.++.+-......=+.| .|++.++.+... +..+...++.|+++.|+.+.+. +.
T Consensus 273 ~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~~~ 347 (544)
T PF13000_consen 273 KILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDVDN 347 (544)
T ss_pred HHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCcccccc
Confidence 45667888888888888888877777777777777 899988876554 4455555566666666543222 00
Q ss_pred ----------------hH---HHHHHHHHHHHHHHH----HHHHHHHhcC-ch--hH----HHHHHHHHHHHHhhhcccc
Q psy4758 178 ----------------PT---VSRKMWNTIGLWGSA----AALVGLSFVG-DN--LV----GAITCLTLAIAINAGTYTG 227 (318)
Q Consensus 178 ----------------~~---~~r~~~~~~~~~~~~----~~~~~~~~~~-~~--~~----~~~~~~~~~~~~~~~~~~~ 227 (318)
.| ..|.+ ..++..-. ++.......+ +. .. .++..-.+..+........
T Consensus 348 ~~l~~~~~~~~~~~~l~g~~g~L~~W--l~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVa 425 (544)
T PF13000_consen 348 KALPNFSRANKIIRLLVGDAGALRPW--LWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVA 425 (544)
T ss_pred ccccccccccchhhhhhccchhhHHH--HHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01111 11111111 1111111222 11 11 2222223333434444444
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
..+.-..+.... =|+.|.+.|++.|+|+-.-..+.=++.|.
T Consensus 426 i~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 426 IMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 455555555444 89999999999999998777776666665
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.61 E-value=0.018 Score=49.13 Aligned_cols=109 Identities=17% Similarity=0.083 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHH--HhcCch-------hHHHHHHHHHHHHHhhhccccccccccccCcc---chhhHHHHHHHHHHHH
Q psy4758 187 TIGLWGSAAALVGL--SFVGDN-------LVGAITCLTLAIAINAGTYTGFLSNHLDLSPN---FAGTLMGFTNGCANIA 254 (318)
Q Consensus 187 ~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g 254 (318)
.++.++..++.+++ ...+.. ....+.+.+++.+.++.-+...........++ ++.+.........|+|
T Consensus 5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G 84 (372)
T PF00854_consen 5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG 84 (372)
T ss_dssp HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence 45566666666552 222222 12445555555555554433333333333333 2788888999999999
Q ss_pred HhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 255 SILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 255 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
+.+++.+.+++.++ .+|...|.+.++..+++.+.+..-++.
T Consensus 85 ~~~~~~~~~~i~~~----~~~~~~f~i~~~~~~~~~~~f~~~~~~ 125 (372)
T PF00854_consen 85 SLFSPTLVPYIQQN----YGWFLGFGIPAIGMLLALIVFLSGRKR 125 (372)
T ss_dssp HHHHHHCCCHHHHC----S-HHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred hHhhcccchhhccc----cchhhhhhHHHHHHHHHHHHHHhCCcC
Confidence 99999999999988 899999999999888887766654433
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.38 E-value=0.24 Score=43.25 Aligned_cols=29 Identities=10% Similarity=0.064 Sum_probs=20.6
Q ss_pred cccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758 233 LDLSPNFAGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 233 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
..+.+++|..+..+.+....+|-.+|..+
T Consensus 399 ~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 399 RQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455558888888888788887777665
No 274
>KOG3574|consensus
Probab=96.32 E-value=0.1 Score=43.79 Aligned_cols=146 Identities=14% Similarity=0.035 Sum_probs=75.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH-----HHhhhcCcchHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD-----YIVAKQILSPTVS 181 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~g~~~~~~~~~~ 181 (318)
+++..+.+.+..+........ -.|.+++. .|.|-++.+.....+.= .--.+++..+.| |+||||....
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvv--- 103 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVV--- 103 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceee---
Confidence 566777777777776665444 88988886 67776665544322211 111456666777 9999997633
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchh---------H-HHHHHHHHHHHHhhhccccc-cccccccCccchhhHHHHHHHH
Q psy4758 182 RKMWNTIGLWGSAAALVGLSFVGDNL---------V-GAITCLTLAIAINAGTYTGF-LSNHLDLSPNFAGTLMGFTNGC 250 (318)
Q Consensus 182 r~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 250 (318)
-+..+.+..+..+....+.+ . .....++...+.....-... .....-+.|++.|-+.......
T Consensus 104 ------p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 104 ------PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred ------ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 23333344444444332211 1 11111111112222221111 1222234566677777766666
Q ss_pred HHHHHhHhhhhhhee
Q psy4758 251 ANIASILGPLFVGFI 265 (318)
Q Consensus 251 ~~~g~~~~~~~~g~l 265 (318)
.+.|.+++..+.-.+
T Consensus 178 ~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLAL 192 (510)
T ss_pred HhhhHHhhcceeeEe
Confidence 777777766655444
No 275
>KOG1237|consensus
Probab=96.10 E-value=0.11 Score=46.85 Aligned_cols=175 Identities=18% Similarity=0.136 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-hhhcCcchHHHHHHHHH
Q psy4758 109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-VAKQILSPTVSRKMWNT 187 (318)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~r~~~~~ 187 (318)
.......-.+-..+++++..-+-.|+.+.++.+...+...............+.+++++|-+ ||-+.+ .
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI----------~ 108 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI----------N 108 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH----------H
Confidence 34444455566667777777788888888888887777777777777778888999999965 555544 3
Q ss_pred HHHHHHHHHHHHHHh-------cC-------c----h--hHHH--HH--HHHHHHHHhhhccccccccccccCc----cc
Q psy4758 188 IGLWGSAAALVGLSF-------VG-------D----N--LVGA--IT--CLTLAIAINAGTYTGFLSNHLDLSP----NF 239 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~-------~~-------~----~--~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 239 (318)
++.++..+++.++.. .+ . . .... +. .+.......++.-+.......+-++ .+
T Consensus 109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~ 188 (571)
T KOG1237|consen 109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE 188 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence 333333333222211 10 0 0 1011 11 1111111233344555555555555 22
Q ss_pred ---hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758 240 ---AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297 (318)
Q Consensus 240 ---~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (318)
...-+.......+.|..++..+..++.|. .+|...|.+..++..++.++++...
T Consensus 189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~----~~w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN----VGWKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred hhCcccchhHHHHHHHHHHHHHHHHHHhhhhc----ccceeeccHHHHHHHHHHHHHHcCc
Confidence 34677777888889999999998888877 7888889888888888777766543
No 276
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.80 E-value=1.4 Score=40.68 Aligned_cols=54 Identities=24% Similarity=0.381 Sum_probs=42.5
Q ss_pred CchhHHHHHHhhHhhHHHhHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHHHH
Q psy4758 9 ERARLFSFAFSGTQFGNLVTLPVAGLLAGS------PWGWPSIFYVSGAVAIVWAAAWCY 62 (318)
Q Consensus 9 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~gWr~~f~~~~~~~~~~~~~~~~ 62 (318)
+|-..+.++..+.++|+.+++.+..++.+. ..+|...|.+.++..++..++...
T Consensus 121 ~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 121 LRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999988742 147999999988887776554433
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.76 E-value=0.15 Score=43.49 Aligned_cols=167 Identities=19% Similarity=0.125 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc------e-----------------eechhhhchHHHHHHHHHHHHHHHh
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQF------D-----------------IKSNGFLSAAPYLAQWILILVFSWL 166 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~------~-----------------~~~~~~~~~~~~~~~~~~~~~~g~l 166 (318)
..+++...+.+..+..+.+-.-..+.+..+- + ....+.+...-.+..++..+++.++
T Consensus 3 ~~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~f 82 (402)
T PF02487_consen 3 VAFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFF 82 (402)
T ss_pred hHHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhh
Confidence 3455666777777777777777777632110 0 1112224444445667777778888
Q ss_pred HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758 167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF 246 (318)
Q Consensus 167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (318)
.+|+..+.-. .....+..+++++..+.++... -+..+.+.....+..-.....+.. .+++. ..+-
T Consensus 83 i~~v~y~~Ri----------~~~~~l~~~g~l~va~~~~v~~-~l~Gv~las~ssg~GE~tfL~lt~-~y~~~---~l~~ 147 (402)
T PF02487_consen 83 IHRVPYWIRI----------LICVALSAAGMLLVAFSPSVWV-RLLGVVLASLSSGLGEVTFLSLTH-FYGKS---SLSA 147 (402)
T ss_pred hhhccchHHH----------HHHHHHHHHHHhheeeccchhH-HHHHHHHHhhhhhhhHHHHHHHHH-hcCcc---cccc
Confidence 8877643212 4566677777777776655432 222222222222322233333332 33332 2222
Q ss_pred HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758 247 TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 247 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.......++.+|+...-.+.+ .+ .+.+..+.....+.++-.+.++
T Consensus 148 wssGTG~aGl~Ga~~y~~lT~-~g--~s~~~tll~~~~lp~~~~~~~f 192 (402)
T PF02487_consen 148 WSSGTGGAGLVGALYYLGLTT-LG--LSPRTTLLIMLVLPAIFLLSYF 192 (402)
T ss_pred ccCCcChhhHHHHHHHHHHHH-hC--cCHHHHHHHHHHHHHHHHHHHH
Confidence 233333444455544433333 11 4556667666655544443333
No 278
>KOG1479|consensus
Probab=95.63 E-value=0.13 Score=43.69 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=23.1
Q ss_pred HHHHhhhhhhhhhhhccee---echhhhchH-HHHHHHHHHHHHHHhHH
Q psy4758 124 WTLLTEMPSYINSVLQFDI---KSNGFLSAA-PYLAQWILILVFSWLAD 168 (318)
Q Consensus 124 ~~~~~~~p~~l~~~~g~~~---~~~~~~~~~-~~~~~~~~~~~~g~l~d 168 (318)
....+..|-+..+..+-.. ...-..... ..+...+|.+...++-+
T Consensus 260 ~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~ 308 (406)
T KOG1479|consen 260 FVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTW 308 (406)
T ss_pred eeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccC
Confidence 3444567877776443222 122223333 56667777666555543
No 279
>KOG4686|consensus
Probab=95.26 E-value=0.0042 Score=49.59 Aligned_cols=151 Identities=9% Similarity=-0.041 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHh--hhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758 108 PVWAVLITHLCQNWGYWTLLT--EMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW 185 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~--~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~ 185 (318)
++..+.+..++.+.+++.+.. -+..+++...+.+..+..++++.+...+++-.+++|++.||.-.-|..
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~g--------- 112 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLG--------- 112 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHH---------
Confidence 444454555444444443321 122333333556666778888999999999999999999975433221
Q ss_pred HHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhh
Q psy4758 186 NTIGLWGSAAALVGLSFV---GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLF 261 (318)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~ 261 (318)
..+-++...++-+++... +..+.....-++++.+.-.. ....+.+....+.. +-+.++|+..+..++|+.+--.+
T Consensus 113 tii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl-AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l 191 (459)
T KOG4686|consen 113 TIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL-AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL 191 (459)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh-hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee
Confidence 122233333333333322 22222333444555443332 23344444444444 49999999999999999988888
Q ss_pred hheeecc
Q psy4758 262 VGFIVTD 268 (318)
Q Consensus 262 ~g~l~~~ 268 (318)
+++++|.
T Consensus 192 m~~ly~~ 198 (459)
T KOG4686|consen 192 MPFLYDT 198 (459)
T ss_pred cHHHHHH
Confidence 8888876
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.23 E-value=0.71 Score=40.86 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=34.2
Q ss_pred cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758 227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT 267 (318)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 267 (318)
..+...++....+ ..+-+++.....|+|..+++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777655 8999999999999999999998888777
No 281
>KOG3880|consensus
Probab=94.41 E-value=0.13 Score=41.73 Aligned_cols=58 Identities=14% Similarity=0.093 Sum_probs=39.1
Q ss_pred hHHHHHHhhHhhHHHhHHHHHHHHhC-CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758 12 RLFSFAFSGTQFGNLVTLPVAGLLAG-SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA 69 (318)
Q Consensus 12 ~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~ 69 (318)
...+-+..+.+.++.+|..--..+.+ .+..-|.+.+++..+.++.+...++.+++++.
T Consensus 146 ~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 146 IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 34455566666667777666666665 33677888888888887776777777766543
No 282
>KOG3098|consensus
Probab=94.24 E-value=2.7 Score=36.88 Aligned_cols=111 Identities=16% Similarity=0.092 Sum_probs=75.4
Q ss_pred chhhh-chHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhh
Q psy4758 144 SNGFL-SAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINA 222 (318)
Q Consensus 144 ~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
.+|+. .++......+..++.+.+.|+++.|..+ .++..........+.+.. .........++|.+..
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~l----------v~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaa- 117 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWAL----------VIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAA- 117 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHH----------HHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHH-
Confidence 35554 6666777888999999999999999866 556655555555554443 2224555555555544
Q ss_pred hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758 223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV 266 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~ 266 (318)
..+.....+..+...++ ..+..++.-.+...+..+|..+.-.+.
T Consensus 118 llw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 118 LLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred heecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 45666666666766666 888899888888888777766555444
No 283
>KOG1479|consensus
Probab=93.96 E-value=3.6 Score=35.25 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK 173 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 173 (318)
-.++.+++........++.+.+..+.|.++..+.+. .-.....+.+.+.+...+...+--+...|
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666677788888888877776545444 33444444455555455444444444433
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.95 E-value=0.73 Score=40.35 Aligned_cols=69 Identities=12% Similarity=-0.004 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeechhhhc---hHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758 110 WAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKSNGFLS---AAPYLAQWILILVFSWLADYIVAKQILSP 178 (318)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 178 (318)
.++.+.++++.........-.|..+++ ..+.|-.+.+... -++.+=-+-+.++=...+.|+||||....
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhh
Confidence 445666777766665545677888877 1344444444332 22222223333334556668999997643
No 285
>KOG4332|consensus
Probab=93.91 E-value=0.035 Score=44.11 Aligned_cols=44 Identities=23% Similarity=0.177 Sum_probs=36.4
Q ss_pred hhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 133 YINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 133 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
|+.+.+|+...++|.++.......++...+.|-+.||.|||+.-
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac 105 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC 105 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce
Confidence 34455899999999988877777888888889999999999854
No 286
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.80 E-value=3.1 Score=36.51 Aligned_cols=149 Identities=13% Similarity=0.128 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc---eeechhhhchHHHH-HHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQF---DIKSNGFLSAAPYL-AQWILILVFSWLADYIVAKQILSPTVSR 182 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~r 182 (318)
+.+....+..++..+.++.+ --++|.+.+ +++....+-...-+ ++++..++.+++.++..+++.+..
T Consensus 27 ~kflpl~Ll~f~I~~ny~~l-----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~---- 97 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLL-----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI---- 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH----
Confidence 55666666555554444333 223343333 34555555444444 567778888999999988886632
Q ss_pred HHHHHHHHHHH---HHHHHHHHhc---Cch-----------h------------HHHHHHHHHHHHH-hhhccccccccc
Q psy4758 183 KMWNTIGLWGS---AAALVGLSFV---GDN-----------L------------VGAITCLTLAIAI-NAGTYTGFLSNH 232 (318)
Q Consensus 183 ~~~~~~~~~~~---~~~~~~~~~~---~~~-----------~------------~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (318)
..+..+. ..+.++.+.. +.+ + +.........--. .....-......
T Consensus 98 ----~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~fa 173 (509)
T COG3202 98 ----ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFA 173 (509)
T ss_pred ----HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 1222222110 000 0 1111111222111 222233455566
Q ss_pred cccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 233 LDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 233 ~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
.|....+ ..+-+++.+...|++..++..+..++..+
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6776655 88999999999999999999998888764
No 287
>KOG1237|consensus
Probab=92.81 E-value=7.2 Score=35.50 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=38.1
Q ss_pred chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Q psy4758 10 RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVW 56 (318)
Q Consensus 10 r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~ 56 (318)
+...+.++....++|..++..+-.++-+. .+|.+.|.+..+..++.
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~-~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDN-VGWKLGFGIPTVLNALA 237 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhc-ccceeeccHHHHHHHHH
Confidence 34778899999999999999988888777 89999998877666554
No 288
>KOG2601|consensus
Probab=92.29 E-value=2.8 Score=35.46 Aligned_cols=70 Identities=9% Similarity=0.035 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
+..+.+.+.++....+--...+-...|+.+-.|-|...+......-+....+...+.|...|+..|.|.+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi 96 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI 96 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH
Confidence 3344455566666666555555566677664454555555555555566666777778889999999876
No 289
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=91.83 E-value=3.4 Score=33.04 Aligned_cols=64 Identities=8% Similarity=0.003 Sum_probs=43.3
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA 69 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~ 69 (318)
+.|| ++||++.|+.-...++++.+-..+...+.+. ..-+.. .+.+....+..+...++++..|+
T Consensus 123 ~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fl-l~la~~~~~v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 123 RNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFL-LFLAVLPAVVCLVAMFFVRPVPP 186 (250)
T ss_pred HhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHH-HHHHHHHHHHHHHHhhheeccCC
Confidence 4576 6899999999999999999988888877765 333333 44444444444555555555443
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=91.59 E-value=0.042 Score=45.53 Aligned_cols=30 Identities=10% Similarity=0.081 Sum_probs=0.0
Q ss_pred cccCccchhhHHHHHHHHHHHHHhHhhhhh
Q psy4758 233 LDLSPNFAGTLMGFTNGCANIASILGPLFV 262 (318)
Q Consensus 233 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 262 (318)
..+.|++|..+..+....-.+|-.+|..+.
T Consensus 275 ~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 275 KSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------------------
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455577777777777777777776653
No 291
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.36 E-value=9.8 Score=30.47 Aligned_cols=23 Identities=9% Similarity=-0.216 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q psy4758 115 THLCQNWGYWTLLTEMPSYINSV 137 (318)
Q Consensus 115 ~~~~~~~~~~~~~~~~p~~l~~~ 137 (318)
.........++....=..|++++
T Consensus 186 ~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 186 ILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHHHHHHhcccchHHHHHhC
Confidence 33344455566666666677764
No 292
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=88.60 E-value=0.49 Score=40.42 Aligned_cols=50 Identities=16% Similarity=0.357 Sum_probs=42.2
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHH
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAA 58 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~ 58 (318)
++|.+.+.++..+.++|..+++.+.+++.++ .||.+.|.+.++..++..+
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~-~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQN-YGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-S-HHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccc-cchhhhhhHHHHHHHHHHH
Confidence 4577888999999999999999999999988 9999999998877666533
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.07 E-value=2.9 Score=27.99 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=27.0
Q ss_pred hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC
Q psy4758 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTS 271 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 271 (318)
++.+.++-...-.+++.+-....||+.|+..+
T Consensus 40 k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 40 KGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 78888888888889998888899999998643
No 294
>KOG4830|consensus
Probab=87.78 E-value=1 Score=35.87 Aligned_cols=70 Identities=10% Similarity=0.237 Sum_probs=54.5
Q ss_pred ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHH
Q psy4758 94 SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVF 163 (318)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
+..+.+|..-|++-.+..+.+.+.+.-...+....|+|.|..+...++.....++-.+..+++..-+.+.
T Consensus 188 ~~~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~ 257 (412)
T KOG4830|consen 188 ELVRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN 257 (412)
T ss_pred hhhcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence 3345667777888888888899999988889999999999998888888777777666666666555443
No 295
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.22 E-value=16 Score=32.19 Aligned_cols=19 Identities=5% Similarity=-0.106 Sum_probs=9.6
Q ss_pred hhhccccccccccccCccc
Q psy4758 221 NAGTYTGFLSNHLDLSPNF 239 (318)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~ 239 (318)
.+........+....+|+.
T Consensus 120 ~~~~q~s~~gla~~fp~~~ 138 (437)
T TIGR00939 120 MALLQGSLFGLAGVFPSTY 138 (437)
T ss_pred hhhhcccchhhcccCCHHH
Confidence 3444455555555555443
No 296
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=85.31 E-value=28 Score=31.44 Aligned_cols=31 Identities=10% Similarity=0.186 Sum_probs=15.1
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYI 170 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 170 (318)
+++..-|.+.....+..++.+.++|+.+-|+
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444445554444444445555555554443
No 297
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=83.91 E-value=5.3 Score=29.00 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=21.6
Q ss_pred ccccccccCccchhhHHHHHHHHHHHHHhH
Q psy4758 228 FLSNHLDLSPNFAGTLMGFTNGCANIASIL 257 (318)
Q Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 257 (318)
+-.+.....|++.|+..|+-.+-.|++-+.
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 333444667777999999998888876543
No 298
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=83.65 E-value=19 Score=29.22 Aligned_cols=32 Identities=16% Similarity=0.005 Sum_probs=21.6
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhh
Q psy4758 100 WKAILTSLPVWAVLITHLCQNWGYWTLLTEMP 131 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 131 (318)
.+++.|+|+.+..................|.|
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 44577888777776666666666666666665
No 299
>KOG2881|consensus
Probab=80.33 E-value=28 Score=27.81 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 153 YLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 153 ~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
.+|..++.+-+-.++.|+..|++.
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt 273 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVT 273 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEE
Confidence 344455444455678888888766
No 300
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=74.45 E-value=61 Score=28.56 Aligned_cols=48 Identities=15% Similarity=-0.031 Sum_probs=31.2
Q ss_pred CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Q psy4758 6 PPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAA 59 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~ 59 (318)
.+++.+...++.+++.+.|...-|...+ .+|=++..+..+++......
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g------~~Gf~p~lillll~~p~m~~ 65 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAG------FGGLIPILLMLVLAYPIAFY 65 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHh------cchHHHHHHHHHHHHHHHHH
Confidence 3456677888888888888777777665 35556666655555444333
No 301
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=73.24 E-value=46 Score=26.65 Aligned_cols=25 Identities=12% Similarity=0.289 Sum_probs=14.0
Q ss_pred hhHHHHHHhhHhhHHHhHHHHHHHH
Q psy4758 11 ARLFSFAFSGTQFGNLVTLPVAGLL 35 (318)
Q Consensus 11 ~~~~~~~~~~~~~G~~~~~~~~~~l 35 (318)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555556666666666555444
No 302
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=67.71 E-value=8.4 Score=31.02 Aligned_cols=55 Identities=27% Similarity=0.594 Sum_probs=40.2
Q ss_pred CccCCC-CCchhHHHHHHh-hHhhHHHhHHHHHHHHhCC-CCCchHHHHHHHHHHHHH
Q psy4758 2 SKWAPP-MERARLFSFAFS-GTQFGNLVTLPVAGLLAGS-PWGWPSIFYVSGAVAIVW 56 (318)
Q Consensus 2 ~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~~~~~ 56 (318)
.|++|+ ++|+...+.... ...+|..+++.+++.+... ..+||..|.+........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 466776 678999999888 5888888888777766542 258999777766665443
No 303
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=66.41 E-value=93 Score=27.44 Aligned_cols=148 Identities=5% Similarity=-0.155 Sum_probs=74.9
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI 82 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (318)
|..|+++|-..........+.-..++....|.+.....+++...+...+-.++..+...++--..|+..
T Consensus 12 ~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~G----------- 80 (442)
T COG1457 12 EPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTG----------- 80 (442)
T ss_pred CCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccC-----------
Confidence 566777775444555555544445555555444432256666655543333333333332211111110
Q ss_pred hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHH
Q psy4758 83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILV 162 (318)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
-++....|..|-.+.-+...+.......++++++.++.-.... .. +...........++...+..++
T Consensus 81 -----------lpqmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~if 147 (442)
T COG1457 81 -----------LPQMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIF 147 (442)
T ss_pred -----------CChheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHH
Confidence 0000111223444444666666677777888877776554321 11 3334445555566667777777
Q ss_pred HHHhHHHHhhhc
Q psy4758 163 FSWLADYIVAKQ 174 (318)
Q Consensus 163 ~g~l~dr~g~~~ 174 (318)
+-+...++.|-.
T Consensus 148 G~r~l~~l~~~a 159 (442)
T COG1457 148 GYRALHKLERIA 159 (442)
T ss_pred hHHHHHHHHHHH
Confidence 777777776654
No 304
>PRK11017 codB cytosine permease; Provisional
Probab=63.44 E-value=1e+02 Score=26.86 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=30.0
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVW 56 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~ 56 (318)
|-.|++||...........+.+........+.......+|+.......+-.++.
T Consensus 2 ~pvp~~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i~ 55 (404)
T PRK11017 2 SPVPQSARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLLL 55 (404)
T ss_pred CCCCHHHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 456888887656655555555555454444444333377777766544444443
No 305
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=62.87 E-value=9.1 Score=25.70 Aligned_cols=48 Identities=19% Similarity=0.099 Sum_probs=34.3
Q ss_pred echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 143 KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
...|-.+..++...++.++++++..|+....+-= .++..++.++..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D----------~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD----------WIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH----------HHhHHHHHHhHHhe
Confidence 4567788888999999999999999987665532 44555555544443
No 306
>KOG3880|consensus
Probab=61.93 E-value=20 Score=29.77 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc---------ce-----eechhhhchHHHHHHHHHHHHHHHhHHHHhhh
Q psy4758 108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ---------FD-----IKSNGFLSAAPYLAQWILILVFSWLADYIVAK 173 (318)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---------~~-----~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 173 (318)
....+++...+.+.++..+.+-.-.++.++.+ .+ ....|.+...-.+-..+-.+......||+.-.
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 44556666777777776666666666655433 01 11244444445566667777777888876433
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Q psy4758 174 QILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL 207 (318)
Q Consensus 174 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (318)
.-. .+..++.+.++.+.++..+.+
T Consensus 93 ~Ri----------~~~v~~sa~s~~lVafs~s~~ 116 (409)
T KOG3880|consen 93 FRI----------ALVVLLSALSFFLVAFSNSVP 116 (409)
T ss_pred hHH----------HHHHHHHhcceEEEEeccchh
Confidence 211 456666667776666665544
No 307
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=59.94 E-value=20 Score=22.60 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=17.0
Q ss_pred hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758 256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293 (318)
Q Consensus 256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (318)
++.+++.|++.+. +...++..++..++++++.
T Consensus 21 ~iisfi~Gy~~q~------~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 21 AIISFIVGYITQS------FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhhe
Confidence 3445566666554 4556665555555544443
No 308
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=59.87 E-value=77 Score=26.76 Aligned_cols=21 Identities=14% Similarity=0.562 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q psy4758 275 WQTIFLIAAAIFFFGNLIFLI 295 (318)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.++.+++..++.+++.+++..
T Consensus 285 ~~~ly~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 285 FSWLYILAFALIIIGFVVYNL 305 (334)
T ss_pred ccHHHHHHHHHHHHHhheEEc
Confidence 344555555555555555443
No 309
>PRK15015 carbon starvation protein A; Provisional
Probab=59.46 E-value=1.5e+02 Score=27.61 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=22.9
Q ss_pred ccCCCCCchhHHHHH-HhhHhhHHHhHHHHHHHHhCCCCCch
Q psy4758 3 KWAPPMERARLFSFA-FSGTQFGNLVTLPVAGLLAGSPWGWP 43 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~-~~~~~~G~~~~~~~~~~l~~~~~gWr 43 (318)
|+.|.++ -..+|.. .+..+.|+++||.++.. +||-
T Consensus 79 DYvPt~k-~VLfGHHFasIAGAGPivGPvlAa~-----~Gwl 114 (701)
T PRK15015 79 DYVPTDK-KVLFGHHFAAIAGAGPLVGPVLAAQ-----MGYL 114 (701)
T ss_pred CcCcCCc-cchhHHHHHHHhccCccHHHHHHHH-----Hcch
Confidence 6777554 4666654 45556778888877763 7775
No 310
>PRK02237 hypothetical protein; Provisional
Probab=58.67 E-value=17 Score=24.53 Aligned_cols=47 Identities=17% Similarity=0.036 Sum_probs=34.1
Q ss_pred chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758 144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL 200 (318)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 200 (318)
..|-.+..++...++.+++++|..|+....+-= .++..++.++..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D----------~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD----------WIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH----------HHhHHHHHHhHHHh
Confidence 477888889999999999999999987655432 45555555554443
No 311
>KOG4830|consensus
Probab=58.02 E-value=8 Score=31.09 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHh---------HHHHhhhcCc
Q psy4758 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWL---------ADYIVAKQIL 176 (318)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~g~~~~~ 176 (318)
..+..+..-.......+|+-.|+++ .|.++.....++....+...+..++.|.. .||+|||+..
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3345555555556667778888888 79999888888888888888888877643 5799998754
No 312
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=57.80 E-value=51 Score=21.87 Aligned_cols=21 Identities=33% Similarity=0.689 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFL 294 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~ 294 (318)
.|-.+|.+.+++.+.++....
T Consensus 51 QWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 51 QWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 566777777777776665554
No 313
>PRK10263 DNA translocase FtsK; Provisional
Probab=55.77 E-value=1.1e+02 Score=31.08 Aligned_cols=23 Identities=9% Similarity=-0.285 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhh
Q psy4758 151 APYLAQWILILVFSWLADYIVAK 173 (318)
Q Consensus 151 ~~~~~~~~~~~~~g~l~dr~g~~ 173 (318)
+.+.++.+|..+...+..-+|.-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 34566677777766666666643
No 314
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=55.05 E-value=20 Score=24.25 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=22.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYIGANSP 68 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~~~~~~ 68 (318)
.+|+.+|++...++++.+.+.+.+.||..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 58999999988788777777777777654
No 315
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=54.91 E-value=15 Score=25.64 Aligned_cols=12 Identities=17% Similarity=-0.067 Sum_probs=4.5
Q ss_pred HHHHHhhccccc
Q psy4758 290 NLIFLIFGTSEV 301 (318)
Q Consensus 290 ~~~~~~~~~~~~ 301 (318)
+++.++++|+++
T Consensus 82 lli~y~irR~~K 93 (122)
T PF01102_consen 82 LLISYCIRRLRK 93 (122)
T ss_dssp HHHHHHHHHHS-
T ss_pred HHHHHHHHHHhc
Confidence 333444444333
No 316
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.26 E-value=52 Score=22.27 Aligned_cols=22 Identities=14% Similarity=0.259 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHhHHHHhhhcC
Q psy4758 154 LAQWILILVFSWLADYIVAKQI 175 (318)
Q Consensus 154 ~~~~~~~~~~g~l~dr~g~~~~ 175 (318)
+.+++.....||+.||+-.-..
T Consensus 53 IsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCc
Confidence 4444445566899999866554
No 317
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=53.67 E-value=91 Score=23.23 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=37.7
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCC-----CchHHHHHHHHHHHHHHH
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPW-----GWPSIFYVSGAVAIVWAA 58 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-----gWr~~f~~~~~~~~~~~~ 58 (318)
.++|.+++.+..+.+.++.-.+...--.+-+.+..... .+...+++.++.+.+..+
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~ 73 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMF 73 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHH
Confidence 34566677777777777776666666666666655422 578888888887776533
No 318
>PTZ00370 STEVOR; Provisional
Probab=53.35 E-value=13 Score=30.02 Aligned_cols=34 Identities=6% Similarity=0.190 Sum_probs=22.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q psy4758 273 SQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWND 306 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (318)
..|..+-++..++.++.++++.++.|++++.|..
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~swkh 288 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSWKH 288 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 3455555666666666677777777777776654
No 319
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=52.79 E-value=94 Score=26.67 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHhHHHH
Q psy4758 153 YLAQWILILVFSWLADYI 170 (318)
Q Consensus 153 ~~~~~~~~~~~g~l~dr~ 170 (318)
.+..++.....|++..|.
T Consensus 5 ~i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 5 AILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344455556667776665
No 320
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=51.74 E-value=8.6 Score=27.20 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy4758 43 PSIFYVSGAVAIVWAAAWCY 62 (318)
Q Consensus 43 r~~f~~~~~~~~~~~~~~~~ 62 (318)
||++++..++.+++.++++.
T Consensus 1 RW~l~~iii~~i~l~~~~~~ 20 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFY 20 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHH
Confidence 56666655555554344333
No 321
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=51.58 E-value=17 Score=29.33 Aligned_cols=34 Identities=6% Similarity=0.201 Sum_probs=21.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q psy4758 273 SQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWND 306 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (318)
..|..+-++..++.++.++++.++.|++++.|..
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK~swkh 292 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRKKSWKH 292 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3455555556666666667777777777776654
No 322
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=51.39 E-value=29 Score=23.01 Aligned_cols=6 Identities=33% Similarity=0.661 Sum_probs=2.3
Q ss_pred HHHHHH
Q psy4758 279 FLIAAA 284 (318)
Q Consensus 279 ~~~~~~ 284 (318)
|+++++
T Consensus 6 ~llL~l 11 (95)
T PF07172_consen 6 FLLLGL 11 (95)
T ss_pred HHHHHH
Confidence 333333
No 323
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=50.58 E-value=1.6e+02 Score=25.23 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=24.9
Q ss_pred ccCCCCCchhHHHHHH-hhHhhHHHhHHHHHHHHhCCCCCchHHH
Q psy4758 3 KWAPPMERARLFSFAF-SGTQFGNLVTLPVAGLLAGSPWGWPSIF 46 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~gWr~~f 46 (318)
|+.| .+|-..+|... ...+.|+++||.++.. +||--.+
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~aa~-----~GwlPa~ 86 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILAAQ-----FGWLPAL 86 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHHHH-----hcchHHH
Confidence 6666 45567777754 4556788888887733 7887333
No 324
>PRK03612 spermidine synthase; Provisional
Probab=48.97 E-value=43 Score=30.28 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=35.1
Q ss_pred chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHH
Q psy4758 10 RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61 (318)
Q Consensus 10 r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~ 61 (318)
-++..|-......+|+++|.++.+++.-...|-....++.+.+.++++++..
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999887654226655455555555555444433
No 325
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=48.18 E-value=50 Score=18.59 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=19.7
Q ss_pred hHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHH
Q psy4758 23 FGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCY 62 (318)
Q Consensus 23 ~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~ 62 (318)
+|+.+|..+.+.+... .++.+.=++.++++.+..+..+.
T Consensus 6 iGa~vGg~l~~~lg~~-~~~~~~~~i~aviGAiill~i~~ 44 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGIN-GGGSWGSFIVAVIGAIILLFIYR 44 (48)
T ss_pred HHHHHHHHHHHHhccc-CCchHHHHHHHHHHHHHHHHHHH
Confidence 3455555555444443 44455555666666554444433
No 326
>KOG3097|consensus
Probab=47.94 E-value=1.2e+02 Score=25.82 Aligned_cols=63 Identities=21% Similarity=0.144 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758 107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
|+++.......+.+..+.+........ . +++..... ....+.-+..+++.+.+++++|.|..+
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~v-n--~~lg~~sl----~~~y~~l~~s~m~~~~~Ir~~g~K~tm 91 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSV-N--YDLGTVSL----GALYLSLIDSSMFMPLLIRFLGTKWTM 91 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH-h--cCcccchh----hhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 455666666656555555554332221 1 12222222 223455566666777899999999754
No 327
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=43.78 E-value=40 Score=17.16 Aligned_cols=20 Identities=40% Similarity=0.679 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHHHhHHH
Q psy4758 150 AAPYLAQWILILVFSWLADY 169 (318)
Q Consensus 150 ~~~~~~~~~~~~~~g~l~dr 169 (318)
....+.+++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34456677777777776554
No 328
>COG1288 Predicted membrane protein [Function unknown]
Probab=43.58 E-value=1.9e+02 Score=25.46 Aligned_cols=33 Identities=9% Similarity=0.068 Sum_probs=19.6
Q ss_pred CCCchHHHHHHHHHHHHHHHH-HHHHhcCCCCCC
Q psy4758 39 PWGWPSIFYVSGAVAIVWAAA-WCYIGANSPAQH 71 (318)
Q Consensus 39 ~~gWr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~ 71 (318)
..+||...|+...+..+..+. ...-++++|+..
T Consensus 215 G~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~S 248 (481)
T COG1288 215 GMGLRIVVWVVFTLISIIYVYWYASKVKKDPTLS 248 (481)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 368999999887666554332 223345555443
No 329
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=42.86 E-value=1e+02 Score=20.69 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=21.0
Q ss_pred HHHHHhhHhhHHHhHHHHHHHHhCCCCC----chHHHHHHHH
Q psy4758 14 FSFAFSGTQFGNLVTLPVAGLLAGSPWG----WPSIFYVSGA 51 (318)
Q Consensus 14 ~~~~~~~~~~G~~~~~~~~~~l~~~~~g----Wr~~f~~~~~ 51 (318)
+|.......+..++|..+|-++-+. ++ |-.+|.+.|+
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~-~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRH-YPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCCcHHHHHHHHHHH
Confidence 3444455555666777777777665 44 4444444443
No 330
>KOG3810|consensus
Probab=42.43 E-value=82 Score=26.96 Aligned_cols=122 Identities=15% Similarity=0.222 Sum_probs=64.5
Q ss_pred HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc-ccCccchhhH
Q psy4758 165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL-DLSPNFAGTL 243 (318)
Q Consensus 165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (318)
.+.|...-|.++ +.-.+.......++.+.++....-+.-++.|.. ...-...+++.- .+.|+++-++
T Consensus 64 lLTD~lrYKPvi----------vlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~--tAaEIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 64 LLTDYLRYKPVV----------VLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA--TAAEIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred HHhhhhhcceee----------eeeccchhHHHHHHHhcCCchheeeehhhcChH--HHHHHhhhheeeeecCHHHHHHH
Confidence 466777666655 222222223333344444433222322333332 223334444443 4456668888
Q ss_pred HHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758 244 MGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300 (318)
Q Consensus 244 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (318)
.|.+....-.|-..|..++..+..... .+|...-.+......++.++..++++.+
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~~--~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLET--LSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhcc--cchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 888877777777777666666654421 3555555555566666666666666654
No 331
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=41.14 E-value=99 Score=20.02 Aligned_cols=42 Identities=14% Similarity=0.069 Sum_probs=29.1
Q ss_pred HHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHH
Q psy4758 13 LFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIV 55 (318)
Q Consensus 13 ~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~ 55 (318)
--|...+...+|..+|.+....+.+. ...|..+....+.+.+
T Consensus 28 ~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 28 QAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVL 69 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHH
Confidence 35677888889999999888887775 5555555554444444
No 332
>KOG1278|consensus
Probab=40.04 E-value=22 Score=31.78 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=21.0
Q ss_pred ceeechhhhchHHHHHHHHHHHHHHHhHHHH
Q psy4758 140 FDIKSNGFLSAAPYLAQWILILVFSWLADYI 170 (318)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 170 (318)
++|..-|.+++...+..++..+++|+.+-|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4677777777766666666667777766664
No 333
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=39.90 E-value=1.2e+02 Score=20.58 Aligned_cols=16 Identities=0% Similarity=0.048 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHh
Q psy4758 187 TIGLWGSAAALVGLSF 202 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~ 202 (318)
..+..+..++.++...
T Consensus 91 ~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 91 WLAILLILIGVILIAW 106 (113)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3344555555544443
No 334
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=39.68 E-value=2.7e+02 Score=24.70 Aligned_cols=22 Identities=5% Similarity=0.092 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhHHHHhhhcCc
Q psy4758 155 AQWILILVFSWLADYIVAKQIL 176 (318)
Q Consensus 155 ~~~~~~~~~g~l~dr~g~~~~~ 176 (318)
.+.+..++++.=.|+..+-..+
T Consensus 279 ~a~~i~l~~k~~~~~i~~~~vF 300 (443)
T PRK12489 279 TGALILILTKTDPASISNGEVF 300 (443)
T ss_pred HHHHHHHHcCCCHHHhccchhh
Confidence 3444444455445555544433
No 335
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=39.59 E-value=56 Score=19.86 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=16.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy4758 41 GWPSIFYVSGAVAIVWAAAWCYIGANSPAQ 70 (318)
Q Consensus 41 gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 70 (318)
||-.+|.+...+.++..-.+-..+||..++
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 455555555444444434455567776543
No 336
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=39.40 E-value=43 Score=20.03 Aligned_cols=27 Identities=19% Similarity=0.118 Sum_probs=15.7
Q ss_pred chHHHHHHHHHH---HHHHHHHHHHhcCCC
Q psy4758 42 WPSIFYVSGAVA---IVWAAAWCYIGANSP 68 (318)
Q Consensus 42 Wr~~f~~~~~~~---~~~~~~~~~~~~~~~ 68 (318)
+|..|.+...+. ++.-++.++.+|+.|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 477776655543 333345666777765
No 337
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=38.76 E-value=76 Score=18.72 Aligned_cols=24 Identities=29% Similarity=0.553 Sum_probs=18.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHH
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYI 63 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~ 63 (318)
-|||..-++.+.++++.+.+.-..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~ 26 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIY 26 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhh
Confidence 589999999998888765554443
No 338
>KOG1277|consensus
Probab=38.75 E-value=36 Score=29.69 Aligned_cols=30 Identities=10% Similarity=0.148 Sum_probs=16.0
Q ss_pred hhhhchHHHHHHHHHHHHHHHhH----HHHhhhc
Q psy4758 145 NGFLSAAPYLAQWILILVFSWLA----DYIVAKQ 174 (318)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~g~l~----dr~g~~~ 174 (318)
-|.+.+...+..++.+++.|+.+ .|.|-|+
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHH
Confidence 34455555555566666655544 4555444
No 339
>COG1585 Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=38.32 E-value=1.5e+02 Score=21.34 Aligned_cols=27 Identities=7% Similarity=0.015 Sum_probs=21.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYIGAN 66 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~~~~ 66 (318)
.+|..-+...++++++...+...+++.
T Consensus 45 ~~~~~q~v~f~~lsv~~~~l~rr~~~~ 71 (140)
T COG1585 45 LSWWLQLVLFAILSVLLALLGRRFVRR 71 (140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678888888888888887777777764
No 340
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=37.04 E-value=1.1e+02 Score=19.22 Aligned_cols=15 Identities=13% Similarity=0.286 Sum_probs=6.3
Q ss_pred hHHHHHHHHHHHHHH
Q psy4758 275 WQTIFLIAAAIFFFG 289 (318)
Q Consensus 275 ~~~~~~~~~~~~~~~ 289 (318)
...+|.+..++.++.
T Consensus 12 m~iVF~~L~lL~~~i 26 (79)
T PF04277_consen 12 MGIVFLVLILLILVI 26 (79)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444443333
No 341
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=36.22 E-value=89 Score=20.11 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4758 276 QTIFLIAAAIFFFGNLIFLIF 296 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~ 296 (318)
++.+++.+++-++|++.+.+.
T Consensus 23 RYGLf~GAIFQliCilAiI~~ 43 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIILP 43 (85)
T ss_pred HHHHHHHHHHHHHHHHheeee
Confidence 556677777777776665554
No 342
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=34.76 E-value=1.7e+02 Score=22.54 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=21.9
Q ss_pred CCchhHHHHHHhhHhhHHHhHHHHHHHHhC
Q psy4758 8 MERARLFSFAFSGTQFGNLVTLPVAGLLAG 37 (318)
Q Consensus 8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 37 (318)
++.+++.++...+..+|.++|..+..++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 445777777777778888888888777654
No 343
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=34.73 E-value=2.2e+02 Score=22.08 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4758 277 TIFLIAAAIFFFGNLI 292 (318)
Q Consensus 277 ~~~~~~~~~~~~~~~~ 292 (318)
..|-+.+++.+...-+
T Consensus 70 ~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 70 PAFRIAGGIILFLIAL 85 (203)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3555555554443333
No 344
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=33.47 E-value=3.2e+02 Score=23.63 Aligned_cols=31 Identities=19% Similarity=0.096 Sum_probs=18.4
Q ss_pred hcceeechhhhchHHHHHHHHHHHHHHHhHH
Q psy4758 138 LQFDIKSNGFLSAAPYLAQWILILVFSWLAD 168 (318)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 168 (318)
.|-+..+.+.+.+.+-...-+|+...-++.|
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 4555666666666665566666665555444
No 345
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=33.10 E-value=57 Score=18.31 Aligned_cols=7 Identities=0% Similarity=0.169 Sum_probs=2.6
Q ss_pred HHhhccc
Q psy4758 293 FLIFGTS 299 (318)
Q Consensus 293 ~~~~~~~ 299 (318)
.+..+++
T Consensus 27 ~w~~~~~ 33 (49)
T PF05545_consen 27 IWAYRPR 33 (49)
T ss_pred HHHHccc
Confidence 3333333
No 346
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=30.44 E-value=62 Score=23.15 Aligned_cols=26 Identities=15% Similarity=0.086 Sum_probs=19.4
Q ss_pred CCccCCCCCchhHHHHHHhhHhhHHH
Q psy4758 1 MSKWAPPMERARLFSFAFSGTQFGNL 26 (318)
Q Consensus 1 i~~~~~~~~r~~~~~~~~~~~~~G~~ 26 (318)
+.|++|++.|..+.+.+.......--
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999998888766554433
No 347
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=29.28 E-value=1.4e+02 Score=20.90 Aligned_cols=29 Identities=10% Similarity=-0.016 Sum_probs=15.9
Q ss_pred chHHHHHHHHHH-----HHHHHHHHHHhcCCCCC
Q psy4758 42 WPSIFYVSGAVA-----IVWAAAWCYIGANSPAQ 70 (318)
Q Consensus 42 Wr~~f~~~~~~~-----~~~~~~~~~~~~~~~~~ 70 (318)
.|..|.+..+++ +++-++.++++|+.|..
T Consensus 31 VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 31 VRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 366665544332 22234567778887754
No 348
>PHA02692 hypothetical protein; Provisional
Probab=29.05 E-value=1.3e+02 Score=18.57 Aligned_cols=25 Identities=12% Similarity=0.127 Sum_probs=11.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHh
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYIG 64 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~~ 64 (318)
.+|++.+++..+..++..++.++++
T Consensus 43 ~~~~~~ii~~~~~~~~~vll~flYL 67 (70)
T PHA02692 43 VPWTTVFLIGLIAAAIGVLLCFHYL 67 (70)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566665553333333334444443
No 349
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=28.91 E-value=1.3e+02 Score=18.03 Aligned_cols=37 Identities=11% Similarity=-0.033 Sum_probs=21.3
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc
Q psy4758 104 LTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQF 140 (318)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 140 (318)
|+|+....+.+..+.+.........|...|++..-|.
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi 38 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGI 38 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCC
Confidence 4566666665555555555555556666777664443
No 350
>KOG2601|consensus
Probab=28.81 E-value=91 Score=26.98 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=27.2
Q ss_pred ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758 228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD 268 (318)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 268 (318)
..-.++|..|+. |..+.|+.|..+.....+--.+ +.+...
T Consensus 407 VtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il-vIi~pn 447 (503)
T KOG2601|consen 407 VTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL-VIIVPN 447 (503)
T ss_pred HHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE-EEEecC
Confidence 334456667776 9999999999998877654433 344443
No 351
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=28.18 E-value=3.2e+02 Score=22.15 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc
Q psy4758 277 TIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
..-++..++.+++..++.+.+.+
T Consensus 116 ~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 116 WLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHHHHHHHHheeeecCC
Confidence 33344555555666665555443
No 352
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=28.06 E-value=1.5e+02 Score=24.59 Aligned_cols=22 Identities=18% Similarity=0.132 Sum_probs=14.5
Q ss_pred CCCCchhHHHHHHhhHhhHHHh
Q psy4758 6 PPMERARLFSFAFSGTQFGNLV 27 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~G~~~ 27 (318)
+|++|.+..++-......+.+.
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la 29 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLA 29 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 5678888887766665554443
No 353
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=28.06 E-value=1.3e+02 Score=17.64 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=23.5
Q ss_pred HhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHH
Q psy4758 21 TQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61 (318)
Q Consensus 21 ~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~ 61 (318)
.-+|.+++...+..-... ++.+..-.+..+.+++...+..
T Consensus 11 ~il~~vvgyI~ssL~~~~-~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVT-YNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHHhCCC-CChHHHHHHHHHHHHHHHHHHH
Confidence 345666666555554444 7777776666666665544433
No 354
>COG3162 Predicted membrane protein [Function unknown]
Probab=27.76 E-value=1.9e+02 Score=19.30 Aligned_cols=40 Identities=10% Similarity=0.300 Sum_probs=27.4
Q ss_pred cchhhhhcchh--HHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy4758 98 VPWKAILTSLP--VWAVLITHLCQNWGYWTLLTEMPSYINSV 137 (318)
Q Consensus 98 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 137 (318)
..++++.++|+ .|...+..+..++++.....+.|.++...
T Consensus 13 p~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp 54 (102)
T COG3162 13 PRFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATP 54 (102)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCc
Confidence 34667666543 45666677777778878888888887653
No 355
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=27.52 E-value=1.3e+02 Score=18.64 Aligned_cols=16 Identities=13% Similarity=-0.045 Sum_probs=8.9
Q ss_pred HHHHHHHHHHhcCCCC
Q psy4758 54 IVWAAAWCYIGANSPA 69 (318)
Q Consensus 54 ~~~~~~~~~~~~~~~~ 69 (318)
+++-++.++.+|+.+.
T Consensus 50 ii~Yiia~~imP~~~~ 65 (70)
T COG1983 50 IIAYIIAALIMPSEED 65 (70)
T ss_pred HHHHHHHHHHCCCCcc
Confidence 3444556667776553
No 356
>TIGR03144 cytochr_II_ccsB cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction.
Probab=27.22 E-value=3.2e+02 Score=21.77 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=7.7
Q ss_pred hhhcceeechhhh
Q psy4758 136 SVLQFDIKSNGFL 148 (318)
Q Consensus 136 ~~~g~~~~~~~~~ 148 (318)
+..++|+.+...+
T Consensus 179 ~~w~wDpK~~~sl 191 (243)
T TIGR03144 179 SYWSWDPKETWAL 191 (243)
T ss_pred cCCCCCHHHHHHH
Confidence 3356777776543
No 357
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=26.87 E-value=4.3e+02 Score=23.07 Aligned_cols=26 Identities=8% Similarity=-0.010 Sum_probs=20.9
Q ss_pred CCCCchhHHHHHHhhHhhHHHhHHHH
Q psy4758 6 PPMERARLFSFAFSGTQFGNLVTLPV 31 (318)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~G~~~~~~~ 31 (318)
++++.+...++.++..+.|...-|..
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ 27 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQ 27 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHH
Confidence 45677888889999988888888875
No 358
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=26.82 E-value=1.5e+02 Score=20.47 Aligned_cols=25 Identities=8% Similarity=0.028 Sum_probs=15.7
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHH
Q psy4758 100 WKAILTSLPVWAVLITHLCQNWGYW 124 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (318)
.+.+++|++++.-.+.+.+....++
T Consensus 35 ~~~Ll~n~~y~ipf~lNq~GSv~f~ 59 (113)
T PF10639_consen 35 IKFLLLNPKYIIPFLLNQSGSVLFF 59 (113)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4457788888776666655544443
No 359
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=26.49 E-value=76 Score=25.69 Aligned_cols=58 Identities=26% Similarity=0.497 Sum_probs=33.1
Q ss_pred hhhHHHHHHHHHHHHHhHh--hhhhh-eeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758 240 AGTLMGFTNGCANIASILG--PLFVG-FIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 240 ~~~~~g~~~~~~~~g~~~~--~~~~g-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (318)
|+.-+.......++|+.+. |++.+ -..+. ...+|+..+.+.+++.++-++++.++.++
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~--~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIA--LTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4444455555566676543 33333 11111 11468888888887777777777666544
No 360
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=25.35 E-value=2.5e+02 Score=22.19 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=18.7
Q ss_pred HHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Q psy4758 15 SFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVW 56 (318)
Q Consensus 15 ~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~ 56 (318)
..+..+..++.++..++-+++ +++.|.+.+.+++..++
T Consensus 28 ~~~ml~a~l~~~~v~v~ig~l----~~~~~~~~i~gi~~g~l 65 (224)
T PF13829_consen 28 PWLMLGAFLGPIAVFVLIGLL----FGSWWYWLIIGILLGLL 65 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHH
Confidence 344444444444444444444 34456666666655444
No 361
>COG2851 CitM H+/citrate symporter [Energy production and conversion]
Probab=24.81 E-value=4.6e+02 Score=22.74 Aligned_cols=50 Identities=20% Similarity=0.161 Sum_probs=34.6
Q ss_pred HHhhhhhhh--hhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcC
Q psy4758 126 LLTEMPSYI--NSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI 175 (318)
Q Consensus 126 ~~~~~p~~l--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 175 (318)
+..|--.-. ...+|.++.+.-.-..+..+.+++..+...++..|..|||.
T Consensus 153 ~~PWGGPt~Raas~Lg~d~~el~~pliP~~i~Gl~~vl~lA~~lG~kErkRl 204 (433)
T COG2851 153 MLPWGGPTARAASVLGVDPAELFVPLIPIQIIGLVLVLALAWLLGKKERKRL 204 (433)
T ss_pred cCCCCCcHHHHHHHhCCCHHHHHhhhhHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 455543333 23578888887777777788888888888887777666654
No 362
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=24.29 E-value=50 Score=25.14 Aligned_cols=15 Identities=20% Similarity=0.354 Sum_probs=10.5
Q ss_pred CchHHHHHHHHHHHH
Q psy4758 41 GWPSIFYVSGAVAIV 55 (318)
Q Consensus 41 gWr~~f~~~~~~~~~ 55 (318)
-|+|.|++...+-++
T Consensus 2 ~WK~aF~~Lla~~l~ 16 (187)
T PF09911_consen 2 WWKWAFLILLALNLA 16 (187)
T ss_pred hHHHHHHHHHHHHHH
Confidence 399999986555443
No 363
>COG4698 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.19 E-value=83 Score=23.57 Aligned_cols=16 Identities=25% Similarity=0.596 Sum_probs=11.2
Q ss_pred chHHHHHHHHHHHHHH
Q psy4758 42 WPSIFYVSGAVAIVWA 57 (318)
Q Consensus 42 Wr~~f~~~~~~~~~~~ 57 (318)
|+|.|++.-.+-.+.+
T Consensus 11 WKw~f~iLLAln~l~~ 26 (197)
T COG4698 11 WKWLFFILLALNTLLA 26 (197)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988765555443
No 364
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=24.09 E-value=2e+02 Score=20.01 Aligned_cols=18 Identities=11% Similarity=0.078 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHhcCCCCC
Q psy4758 53 AIVWAAAWCYIGANSPAQ 70 (318)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~ 70 (318)
++++-++.++.+|+.|..
T Consensus 52 ~~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 52 TLVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHHhccCCccc
Confidence 344445677778877754
No 365
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=24.02 E-value=1.1e+02 Score=25.61 Aligned_cols=27 Identities=11% Similarity=0.167 Sum_probs=19.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYIGAN 66 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~~~~ 66 (318)
..|++.|++..+++++.+++.+++++.
T Consensus 292 l~~~~Gy~~~l~~m~~~~~~~~~~frr 318 (322)
T COG0598 292 LDWPYGYPIALILMLLLALLLYLYFRR 318 (322)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 579988888777777766666665543
No 366
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.86 E-value=2.2e+02 Score=18.61 Aligned_cols=49 Identities=12% Similarity=0.254 Sum_probs=30.6
Q ss_pred hhhhhcc--hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhh
Q psy4758 100 WKAILTS--LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFL 148 (318)
Q Consensus 100 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~ 148 (318)
++++.+. +-.+.+....+..++++.....+.|..+.....-+....|+.
T Consensus 7 f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~ 57 (91)
T PF04341_consen 7 FQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIV 57 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHH
Confidence 4444443 445666777777788888888999998876433123344443
No 367
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=23.83 E-value=1.1e+02 Score=15.12 Aligned_cols=11 Identities=9% Similarity=0.141 Sum_probs=3.6
Q ss_pred HHHHHhcCCCC
Q psy4758 59 AWCYIGANSPA 69 (318)
Q Consensus 59 ~~~~~~~~~~~ 69 (318)
....+++|+|+
T Consensus 18 ffAI~FRePPr 28 (29)
T PF01405_consen 18 FFAIFFREPPR 28 (29)
T ss_dssp HHHHHSS----
T ss_pred HhhhhccCCCC
Confidence 34445677664
No 368
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=23.24 E-value=96 Score=22.34 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=17.6
Q ss_pred CccCCCCCchhHHHHHHhhHhhH
Q psy4758 2 SKWAPPMERARLFSFAFSGTQFG 24 (318)
Q Consensus 2 ~~~~~~~~r~~~~~~~~~~~~~G 24 (318)
.|++|+..|..+.+.+.......
T Consensus 59 kDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 59 KDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HhhCCHHHHHHHHHHHHHHHHHH
Confidence 58899999998888777665443
No 369
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=23.22 E-value=2.3e+02 Score=18.74 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhHHHHhhh
Q psy4758 152 PYLAQWILILVFSWLADYIVAK 173 (318)
Q Consensus 152 ~~~~~~~~~~~~g~l~dr~g~~ 173 (318)
..+...+.+.+.|.+.||..||
T Consensus 84 ~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 84 TFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3455666778889999998875
No 370
>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.
Probab=21.86 E-value=4.1e+02 Score=21.11 Aligned_cols=18 Identities=17% Similarity=-0.034 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhHHHHhhh
Q psy4758 156 QWILILVFSWLADYIVAK 173 (318)
Q Consensus 156 ~~~~~~~~g~l~dr~g~~ 173 (318)
++.--++.=+++.|+|.-
T Consensus 136 sl~~i~l~l~ls~~~g~~ 153 (241)
T TIGR03732 136 SLWQIPLCLFLARKFGMF 153 (241)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333344555666666543
No 371
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=21.62 E-value=1.3e+02 Score=17.96 Aligned_cols=10 Identities=10% Similarity=0.597 Sum_probs=3.9
Q ss_pred HHHHhhcccc
Q psy4758 291 LIFLIFGTSE 300 (318)
Q Consensus 291 ~~~~~~~~~~ 300 (318)
++.+..++.+
T Consensus 25 vi~~ayr~~~ 34 (60)
T COG4736 25 VIYFAYRPGK 34 (60)
T ss_pred HHHHHhcccc
Confidence 3334444433
No 372
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=21.27 E-value=2.5e+02 Score=23.32 Aligned_cols=26 Identities=15% Similarity=-0.070 Sum_probs=17.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhc
Q psy4758 40 WGWPSIFYVSGAVAIVWAAAWCYIGA 65 (318)
Q Consensus 40 ~gWr~~f~~~~~~~~~~~~~~~~~~~ 65 (318)
..|++.|++..+++++.+++.+++++
T Consensus 288 l~~~~gy~~~l~~m~~i~~~~~~~fk 313 (318)
T TIGR00383 288 LNWKYGYPAVLIVMAVIALGPLIYFR 313 (318)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 46888888776666665555555543
No 373
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=21.23 E-value=1.8e+02 Score=23.58 Aligned_cols=11 Identities=9% Similarity=0.129 Sum_probs=3.9
Q ss_pred HHHHHHhhccc
Q psy4758 289 GNLIFLIFGTS 299 (318)
Q Consensus 289 ~~~~~~~~~~~ 299 (318)
++.+.....++
T Consensus 229 sI~i~~~~~~~ 239 (258)
T PRK10921 229 GVFFSRFYVGK 239 (258)
T ss_pred HHHHHHHHhhc
Confidence 33333333333
No 374
>PHA03049 IMV membrane protein; Provisional
Probab=21.02 E-value=2.1e+02 Score=17.40 Aligned_cols=17 Identities=12% Similarity=0.487 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHhhccc
Q psy4758 283 AAIFFFGNLIFLIFGTS 299 (318)
Q Consensus 283 ~~~~~~~~~~~~~~~~~ 299 (318)
.++.++++++.....+.
T Consensus 10 ICVaIi~lIvYgiYnkk 26 (68)
T PHA03049 10 ICVVIIGLIVYGIYNKK 26 (68)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 33444455555444443
No 375
>CHL00031 psbT photosystem II protein T
Probab=20.94 E-value=1.4e+02 Score=15.24 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy4758 45 IFYVSGAVAIVWAAAWCYIGANSPAQ 70 (318)
Q Consensus 45 ~f~~~~~~~~~~~~~~~~~~~~~~~~ 70 (318)
.|+..+.+++ +....+++|+|+-
T Consensus 7 tfll~~tlgi---lFFAI~FRePPri 29 (33)
T CHL00031 7 TFLLVSTLGI---IFFAIFFREPPKV 29 (33)
T ss_pred HHHHHHHHHH---HHHhheecCCCCC
Confidence 3444443333 3344456787764
No 376
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=20.63 E-value=3.9e+02 Score=20.31 Aligned_cols=46 Identities=20% Similarity=0.386 Sum_probs=23.5
Q ss_pred ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHH
Q psy4758 3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGA 51 (318)
Q Consensus 3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~ 51 (318)
+..|+++|.++.-+-..+..+-=.+.-..+.++.+. |++..++.|+
T Consensus 23 ~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~---~~~i~~igG~ 68 (183)
T PF03741_consen 23 RKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI---FPWILLIGGL 68 (183)
T ss_pred hCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 456776666555433333333334444556666654 3555555543
No 377
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=20.32 E-value=1.5e+02 Score=15.42 Aligned_cols=24 Identities=17% Similarity=0.077 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCC
Q psy4758 48 VSGAVAIVWAAAWCYIGANSPAQH 71 (318)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~ 71 (318)
+..++.+.+.+..+-++++.|...
T Consensus 8 Vy~vV~ffv~LFifGflsnDp~Rn 31 (36)
T PF02532_consen 8 VYTVVIFFVSLFIFGFLSNDPGRN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSS
T ss_pred ehhhHHHHHHHHhccccCCCCCCC
Confidence 334444555455566677766543
No 378
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=20.28 E-value=1.4e+02 Score=22.72 Aligned_cols=28 Identities=11% Similarity=0.331 Sum_probs=19.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758 274 QWQTIFLIAAAIFFFGNLIFLIFGTSEV 301 (318)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (318)
.|...|-+.+.+.+++.+....+.++++
T Consensus 141 ~Y~l~fe~~s~lLLvAmIGAIvLa~~~~ 168 (186)
T MTH00057 141 DYYYLFILASFILLVAMIGAIVLTHDLI 168 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 4677888888887777777766655443
No 379
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.17 E-value=2.2e+02 Score=17.38 Aligned_cols=16 Identities=13% Similarity=0.472 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHhhccc
Q psy4758 284 AIFFFGNLIFLIFGTS 299 (318)
Q Consensus 284 ~~~~~~~~~~~~~~~~ 299 (318)
++.++++++.....+.
T Consensus 11 CVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 11 CVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 3334444444444443
No 380
>PRK11588 hypothetical protein; Provisional
Probab=20.17 E-value=6.7e+02 Score=22.85 Aligned_cols=14 Identities=14% Similarity=0.161 Sum_probs=8.8
Q ss_pred CCchHHHHHHHHHH
Q psy4758 40 WGWPSIFYVSGAVA 53 (318)
Q Consensus 40 ~gWr~~f~~~~~~~ 53 (318)
.+||...++.....
T Consensus 229 ~~~R~i~~~v~~~i 242 (506)
T PRK11588 229 SGLRIVMWVIFTLI 242 (506)
T ss_pred HHHHHHHHHHHHHH
Confidence 56888776655433
No 381
>PRK11588 hypothetical protein; Provisional
Probab=20.11 E-value=5.1e+02 Score=23.56 Aligned_cols=22 Identities=23% Similarity=-0.059 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q psy4758 44 SIFYVSGAVAIVWAAAWCYIGAN 66 (318)
Q Consensus 44 ~~f~~~~~~~~~~~~~~~~~~~~ 66 (318)
.+|.+.-.+.++++++.++ +|.
T Consensus 17 ~~~vilf~iiv~aailT~i-iPa 38 (506)
T PRK11588 17 DTLVIIFFVAILAALATYV-VPV 38 (506)
T ss_pred CHHHHHHHHHHHHHHHHhe-eCC
Confidence 5666666666666555554 453
No 382
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=20.05 E-value=4.1e+02 Score=20.39 Aligned_cols=12 Identities=8% Similarity=0.188 Sum_probs=7.2
Q ss_pred HHHhhhhhhhhh
Q psy4758 125 TLLTEMPSYINS 136 (318)
Q Consensus 125 ~~~~~~p~~l~~ 136 (318)
-+..|.|.+...
T Consensus 112 NigIYiP~Fa~~ 123 (191)
T PF03596_consen 112 NIGIYIPLFASL 123 (191)
T ss_pred eEEEeehhhhcC
Confidence 455677766543
Done!