BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4761
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8T674|ABCGK_DICDI ABC transporter G family member 20 OS=Dictyostelium discoideum
GN=abcG20 PE=3 SV=1
Length = 730
Score = 92.8 bits (229), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 45 ISLLNGLPDPNSL-CGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHL 103
I LL+ LP NS G +SGGQ++R+S+AV ++HSP LLILDEPT G+D ++ IW +L
Sbjct: 130 IKLLD-LPQINSRSVGLLSGGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYL 188
Query: 104 RTLSATGVTCIITTHYIEEA 123
R+L+ +GVT IITTHYI EA
Sbjct: 189 RSLANSGVTIIITTHYINEA 208
>sp|Q55EH8|ABCGN_DICDI ABC transporter G family member 23 OS=Dictyostelium discoideum
GN=abcG23 PE=3 SV=2
Length = 701
Score = 92.4 bits (228), Expect = 8e-19, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 51 LPDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSAT- 109
LP + + ++SGGQQRR+S+A ++HSP LLILDEPT G+ PL+S IW+HL L+
Sbjct: 128 LPSLSKIISELSGGQQRRVSLATALIHSPKLLILDEPTVGVCPLVSSKIWEHLIFLTKNF 187
Query: 110 GVTCIITTHYIEEAR 124
GVT IITTHY++E R
Sbjct: 188 GVTIIITTHYLQECR 202
>sp|P55476|NODI_RHISN Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
NGR234) GN=nodI PE=3 SV=1
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 16 LYFRWKGSHLRELFHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVTM 75
++ R+ G H REL +P P + F S + +P Q+SGG QRR+++A +
Sbjct: 140 VFGRYFGLHTREL--EEAIP-PLLDFARLESKAD-VP-----VAQLSGGMQRRLTLACAL 190
Query: 76 MHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEA 123
++ P LLILDEPT GLDP IW+ LR+L A G T ++TTH++EEA
Sbjct: 191 INDPQLLILDEPTTGLDPHARHLIWERLRSLLALGKTILLTTHFMEEA 238
>sp|P36879|YADG_ECOLI Uncharacterized ABC transporter ATP-binding protein YadG
OS=Escherichia coli (strain K12) GN=yadG PE=3 SV=1
Length = 308
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 44 YISLLNGLPDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHL 103
Y+ L+ N +SGG +RR+ +A +MH P LLILDEPTAG+D + ++W L
Sbjct: 120 YLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFL 179
Query: 104 RTLSATGVTCIITTHYIEEA 123
+ L+ G T I+TTHY+EEA
Sbjct: 180 KDLNDKGTTIILTTHYLEEA 199
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 29 FHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPT 88
F +T I V P + ++ G++SGG +RR+++A +++ P LL++DEPT
Sbjct: 106 FGMSTRKIKEV-IPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPT 164
Query: 89 AGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEARH 125
GLDP IW+ LR L A G T I+TTH++EEA
Sbjct: 165 TGLDPHARHLIWERLRFLLARGKTIILTTHFMEEAER 201
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A +++ P +L+LDEPT GLDP +W+ LR+L A G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEARH 125
ITTH++EEA
Sbjct: 191 ITTHFMEEAER 201
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A +++ P +L+LDEPT GLDP +W+ LR+L A G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEARH 125
ITTH++EEA
Sbjct: 191 ITTHFMEEAER 201
>sp|Q46YX6|NODI_CUPPJ Nod factor export ATP-binding protein I OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=nodI PE=3
SV=1
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
N+ +SGG +RR++VA +++ P LLI+DEPT GLDP IW+ L++L A+G T +
Sbjct: 152 NAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTIL 211
Query: 115 ITTHYIEEA 123
+TTH++EEA
Sbjct: 212 LTTHFMEEA 220
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A +++ P +L+LDEPT GLDP +W+ LR+L A G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEA-RHAHKVPI 131
+TTH++EEA R H++ +
Sbjct: 191 LTTHFMEEAERLCHRLCV 208
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A +++ P +L+LDEPT GLDP +W+ LR+L A G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEA-RHAHKVPI 131
+TTH++EEA R H++ +
Sbjct: 191 LTTHFMEEAERLCHRLCV 208
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A +++ P +L+LDEPT GLDP +W+ LR+L A G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEA-RHAHKVPI 131
+TTH++EEA R H++ +
Sbjct: 191 LTTHFMEEAERLCHRLCV 208
>sp|Q1M7W6|NODI_RHIL3 Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nodI PE=3 SV=2
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 29 FHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPT 88
F +T I +V P + N+ +SGG +RR+++A +++ P LLILDEPT
Sbjct: 113 FRMSTREIETV-IPSLLEFARLESKANTRVADLSGGMKRRLTLARALINDPQLLILDEPT 171
Query: 89 AGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEARH 125
GLDP IW+ LR+L A G T ++TTH +EEA
Sbjct: 172 TGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAER 208
>sp|Q8KLG1|NODI_RHIEC Nod factor export ATP-binding protein I OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
N+ ++SGG +RR+++A +++ P LL++DEPT GLDP IW+ LR+L G T I
Sbjct: 143 NARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRGKTII 202
Query: 115 ITTHYIEEARH 125
+TTH++EEA
Sbjct: 203 LTTHFMEEAER 213
>sp|P08720|NODI_RHILV Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae GN=nodI PE=3 SV=1
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 29 FHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPT 88
F +T I +V P + N+ +SGG +RR+++A +++ P LLILDEPT
Sbjct: 113 FRMSTREIETV-IPSLLEFARLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPT 171
Query: 89 AGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEARH 125
GLDP IW+ LR+L A G T ++TTH +EEA
Sbjct: 172 TGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAER 208
>sp|Q2SVP3|NODI_BURTA Nod factor export ATP-binding protein I OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=nodI PE=3 SV=2
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ G++SGG +RR+++A ++++P +L+LDEPT GLDP +W+ LR+L G T +
Sbjct: 131 DAKVGELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRGKTIL 190
Query: 115 ITTHYIEEA-RHAHKVPI 131
+TTH++EEA R H++ +
Sbjct: 191 LTTHFMEEAERLCHRLCV 208
>sp|Q13ZJ1|NODI_BURXL Nod factor export ATP-binding protein I OS=Burkholderia xenovorans
(strain LB400) GN=nodI PE=3 SV=1
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 55 NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCI 114
++ ++SGG +RR+++A +++ P +LI+DEPT GLDP IW+ LR+L A G T +
Sbjct: 131 DARVSELSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLARGKTIL 190
Query: 115 ITTHYIEEA-RHAHKVPI 131
+TTH++EEA R H++ +
Sbjct: 191 LTTHFMEEAERLCHRLCV 208
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGG +RR++VA ++++ P +L++DEPT GLDP IW+ LR+L A+G T ++TTH++
Sbjct: 148 LSGGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSLLASGKTILLTTHFM 207
Query: 121 EEA 123
EEA
Sbjct: 208 EEA 210
>sp|Q8GNH6|NODI_RHIML Nod factor export ATP-binding protein I OS=Rhizobium meliloti
GN=nodI PE=3 SV=1
Length = 335
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 15 GLYFRWKGSHLRELFHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVT 74
G YFR + + IPS+ + L N + ++ +SGG +RR+++A
Sbjct: 134 GRYFRMSTREIEAV-------IPSLL--EFARLENKV---DARVSDLSGGMKRRLTLARA 181
Query: 75 MMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEARH 125
+++ P LLILDEPT GLDP IW+ LR+L A G T ++TTH +EEA
Sbjct: 182 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAER 232
>sp|Q1LKJ2|NODI_RALME Nod factor export ATP-binding protein I OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
+SGG +RR++VA +++ P LLI+DEPT GLDP IW+ L++L + G T ++TTH+
Sbjct: 135 DLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTHF 194
Query: 120 IEEARH 125
+EEA
Sbjct: 195 MEEAER 200
>sp|O52618|NODI_RHIME Nod factor export ATP-binding protein I OS=Rhizobium meliloti
(strain 1021) GN=nodI PE=3 SV=3
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 15 GLYFRWKGSHLRELFHPTTVPIPSVYFPWYISLLNGLPDPNSLCGQVSGGQQRRISVAVT 74
G YFR + + IPS+ + L N ++ +SGG +RR+++A
Sbjct: 134 GRYFRMSTREIEAV-------IPSLL--EFARLEN---KADARVSDLSGGMKRRLTLARA 181
Query: 75 MMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEARH 125
+++ P LLILDEPT GLDP IW+ LR+L A G T ++TTH +EEA
Sbjct: 182 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAER 232
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGG +RR+++A +++ P LL++DEPT GLDP IW+ LR L A G T ++TTH++
Sbjct: 139 LSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFM 198
Query: 121 EEA 123
EEA
Sbjct: 199 EEA 201
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 47/66 (71%)
Query: 64 GQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEA 123
G ++R+++A ++MH P +L LDEPT+G+DPL W H+ ++ GVT ++TTH+++EA
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEA 523
Query: 124 RHAHKV 129
+ ++
Sbjct: 524 EYCDRI 529
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 52 PDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGV 111
P L G++SGG ++++ +A T++ P +L+LDEP G+DP+ +WQ + L+ G+
Sbjct: 130 PFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGM 189
Query: 112 TCIITTHYIEEARHAHKV 129
+ +T Y++EA V
Sbjct: 190 LILWSTSYLDEAEQCRDV 207
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 47/66 (71%)
Query: 64 GQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIEEA 123
G ++R+++A ++MH P +L LDEPT+G+DPL W H+ ++ GVT ++TTH+++EA
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEA 523
Query: 124 RHAHKV 129
+ ++
Sbjct: 524 EYCDRI 529
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 52 PDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGV 111
P L G++SGG ++++ +A T++ P +L+LDEP G+DP+ +WQ + L+ G+
Sbjct: 130 PFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGM 189
Query: 112 TCIITTHYIEEARHAHKV 129
+ +T Y++EA V
Sbjct: 190 LILWSTSYLDEAEQCRDV 207
>sp|P94440|YFIL_BACSU Uncharacterized ABC transporter ATP-binding protein YfiL
OS=Bacillus subtilis (strain 168) GN=yfiL PE=3 SV=2
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 62 SGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYIE 121
SGG +RRI++ +MH P LLI+DEPT G+DP + I + ++ L+ TG+T I T+HY+E
Sbjct: 134 SGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSHYME 193
Query: 122 E 122
E
Sbjct: 194 E 194
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+ GG +RR+++A +++ P LL++DEPT GLDP IW+ LR L A G T ++TTH++
Sbjct: 138 LGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFM 197
Query: 121 EEA 123
EEA
Sbjct: 198 EEA 200
>sp|O07016|YVFR_BACSU Uncharacterized ABC transporter ATP-binding protein YvfR
OS=Bacillus subtilis (strain 168) GN=yvfR PE=3 SV=1
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 52 PDPNSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGV 111
D + ++SGGQ+RR+S A+ + +P LLILDEPT G+D WQ + LS G
Sbjct: 122 EDLKTRAEKLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLSDQGK 181
Query: 112 TCIITTHYIEEARHA 126
T I +THY++EA A
Sbjct: 182 TIIFSTHYLQEADDA 196
>sp|P23703|NODI_RHILO Nod factor export ATP-binding protein I OS=Rhizobium loti (strain
MAFF303099) GN=nodI PE=3 SV=2
Length = 340
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGG +R +++A +++ P L+++DEPT GLDP IW+ LR L A G T I+TTH+
Sbjct: 172 ELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARGKTIILTTHF 231
Query: 120 IEEARH 125
+EEA
Sbjct: 232 MEEAER 237
>sp|P50332|NODI_RHIGA Nod factor export ATP-binding protein I OS=Rhizobium galegae
GN=nodI PE=3 SV=1
Length = 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
+SGG +RR+++A +++ P LLILDEPT GLDP IW+ LR+L G T ++TTH
Sbjct: 179 DLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTHM 238
Query: 120 IEEARH 125
++EA
Sbjct: 239 MDEAER 244
>sp|Q73P71|PHNC_TREDE Phosphonates import ATP-binding protein PhnC OS=Treponema denticola
(strain ATCC 35405 / CIP 103919 / DSM 14222) GN=phnC
PE=3 SV=1
Length = 256
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 58 CGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSAT-GVTCIIT 116
C ++SGGQ++RI +A +M SP LL+ DEP A LDP S+T+ +++ + + C+I+
Sbjct: 144 CSELSGGQKQRIGIARALMQSPKLLLCDEPIASLDPQSSETVLNYIKEFAVNKNIACLIS 203
Query: 117 THYIEEARH 125
H +E A+
Sbjct: 204 LHQMEAAKK 212
>sp|P32010|DRRA_STRPE Daunorubicin/doxorubicin resistance ATP-binding protein DrrA
OS=Streptomyces peucetius GN=drrA PE=1 SV=1
Length = 330
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 50 GLPDP-NSLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSA 108
GL D + L SGG +RR+ +A +++ +P LL LDEPT GLDP + +W +R L
Sbjct: 128 GLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVD 187
Query: 109 TGVTCIITTHYIEEARH-AHKVPI 131
G T ++TT Y++EA A ++ +
Sbjct: 188 AGTTVLLTTQYLDEADQLADRIAV 211
>sp|P0AAF9|ARTP_SHIFL Arginine transport ATP-binding protein ArtP OS=Shigella flexneri
GN=artP PE=3 SV=1
Length = 242
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQQ+R+++A +M P +L+ DEPTA LDP I+ I +R L+ T +T +I TH +
Sbjct: 142 LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEV 201
Query: 121 EEAR 124
E AR
Sbjct: 202 EVAR 205
>sp|P0AAF6|ARTP_ECOLI Arginine transport ATP-binding protein ArtP OS=Escherichia coli
(strain K12) GN=artP PE=1 SV=1
Length = 242
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQQ+R+++A +M P +L+ DEPTA LDP I+ I +R L+ T +T +I TH +
Sbjct: 142 LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEV 201
Query: 121 EEAR 124
E AR
Sbjct: 202 EVAR 205
>sp|P0AAF7|ARTP_ECOL6 Arginine transport ATP-binding protein ArtP OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=artP PE=3
SV=1
Length = 242
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQQ+R+++A +M P +L+ DEPTA LDP I+ I +R L+ T +T +I TH +
Sbjct: 142 LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEV 201
Query: 121 EEAR 124
E AR
Sbjct: 202 EVAR 205
>sp|P0AAF8|ARTP_ECO57 Arginine transport ATP-binding protein ArtP OS=Escherichia coli
O157:H7 GN=artP PE=3 SV=1
Length = 242
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQQ+R+++A +M P +L+ DEPTA LDP I+ I +R L+ T +T +I TH +
Sbjct: 142 LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEV 201
Query: 121 EEAR 124
E AR
Sbjct: 202 EVAR 205
>sp|Q2KVS6|MACB_BORA1 Macrolide export ATP-binding/permease protein MacB OS=Bordetella
avium (strain 197N) GN=macB PE=3 SV=2
Length = 655
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 59 GQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTH 118
GQ+SGGQQ+R+S+A +M+ +++ DEPT LD + + L+ L+A G T ++ TH
Sbjct: 144 GQLSGGQQQRVSIARALMNGGRIILADEPTGALDTQTGQEVLRILKELNAAGHTIVLVTH 203
Query: 119 YIEEARHAHKV 129
+ ARHA ++
Sbjct: 204 DMSVARHARRI 214
>sp|Q6KHL2|ECFA1_MYCMO Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC
11711) GN=ecfA1 PE=3 SV=1
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 44 YISLLNGLPDPNSLCG---QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIW 100
YIS++ GLP+ N L ++SGGQ+RR+++A + P LI DEPTAGLDP S I
Sbjct: 146 YISIV-GLPE-NYLQRSPFELSGGQKRRVALAGILAMDPDFLIFDEPTAGLDPQGSKEIL 203
Query: 101 QHLRTLSATGVTCIITTHYIEEA 123
+ L++ G T II TH ++ A
Sbjct: 204 EIFGKLNSEGKTVIIVTHNLDHA 226
>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5
PE=1 SV=2
Length = 1642
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ+R++SV + ++ +P +L+LDEPTAG+DP +W L+ A VT + +TH+
Sbjct: 614 KLSGGQKRKLSVGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVT-VFSTHF 672
Query: 120 IEEA 123
++EA
Sbjct: 673 MDEA 676
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRT-LSATGVTCIITTH 118
++ G +R++ A++M+ +P + +LDEP+ G+DP +W+ +RT ++TTH
Sbjct: 1432 KLPAGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTH 1491
Query: 119 YIEEA 123
Y+EEA
Sbjct: 1492 YMEEA 1496
>sp|P37624|YHIH_ECOLI Uncharacterized ABC transporter ATP-binding protein YhiH
OS=Escherichia coli (strain K12) GN=yhiH PE=3 SV=3
Length = 911
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 64 GQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLS-ATGVTCIITTHYIEE 122
G ++R+S+AV ++H P +LILDEPT+G+DP+ D WQ + LS VT I+TH++ E
Sbjct: 411 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNE 470
Query: 123 ARHAHKVPI 131
A ++ +
Sbjct: 471 AERCDRISL 479
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 58 CGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTL--SATGVTCII 115
G++SGG ++++ + ++H P LLILDEPT G+DPL W + ++ + ++ ++
Sbjct: 145 AGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLV 204
Query: 116 TTHYIEEARH 125
T Y+EEA
Sbjct: 205 ATAYMEEAER 214
>sp|Q97N51|ECFA1_STRPN Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=ecfA1 PE=3 SV=1
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ RR+++A + P +L+LDEPTAGLDPL + + L +G+T ++ TH
Sbjct: 145 ELSGGQMRRVAIAGILAMEPAILVLDEPTAGLDPLGRKELMTLFKKLHQSGMTIVLVTHL 204
Query: 120 IEE-ARHAHKV 129
+++ A +A++V
Sbjct: 205 MDDVAEYANQV 215
>sp|Q8RCU0|PSTB1_THETN Phosphate import ATP-binding protein PstB 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=pstB1 PE=3 SV=1
Length = 239
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 1 MVYQPPEKFQ-----VVSVGLYFRWKGSHLRELFHPTTVPIPSVYFPWYISLLNGLPDPN 55
MV+Q P F+ + +G R + ++ LF+ V + Y D N
Sbjct: 80 MVFQRPFLFEGTVKENIELGPSLRGE-KNIDALFYLEAVGLSKDYL---------FKDVN 129
Query: 56 SLCGQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCII 115
+L SGG+ +R+S+A + +SP +L+LDEPT+ LDP + I + ++ L+ G+ I+
Sbjct: 130 NL----SGGEAQRVSIARALANSPEVLLLDEPTSSLDPTSTSIIEELIKRLNREGIMVIL 185
Query: 116 TTHYIEEARH 125
TH +E+A+
Sbjct: 186 VTHNMEQAKR 195
>sp|P45092|ARTP_HAEIN Arginine transport ATP-binding protein ArtP OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=artP PE=3 SV=1
Length = 243
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQQ+R+++A +M P +L+ DEPTA LDP I+ + ++ L TG+T +I TH +
Sbjct: 143 LSGGQQQRVAIARALMMKPQVLLFDEPTAALDPEITAQVVDIIKELQETGITQVIVTHEV 202
Query: 121 EEAR 124
A+
Sbjct: 203 NVAQ 206
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 59 GQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTH 118
G SGG +RR+SVAV ++ P L+ LDEPT G+DP+ +W ++ S G I+TTH
Sbjct: 664 GSYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWDIIQE-SKKGRAIILTTH 722
Query: 119 YIEEA 123
+EEA
Sbjct: 723 SMEEA 727
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 59 GQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTH 118
G SGG +RR+SVA+ ++ P L+ LDEPT G+DP+ +W ++ S G I+TTH
Sbjct: 665 GSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQE-SKKGRAIILTTH 723
Query: 119 YIEEA 123
+EEA
Sbjct: 724 SMEEA 728
>sp|Q8DMY0|ECFA1_STRR6 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=ecfA1 PE=3 SV=1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ RR+++A + P +L+LDEPTAGLDPL + + L +G+T ++ TH
Sbjct: 145 ELSGGQMRRVAIAGILAMEPSILVLDEPTAGLDPLGRKELMTLFKKLHQSGMTIVLVTHL 204
Query: 120 IEE-ARHAHKV 129
+++ A +A++V
Sbjct: 205 MDDVAEYANQV 215
>sp|Q04HV8|ECFA1_STRP2 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=ecfA1 PE=3 SV=1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ RR+++A + P +L+LDEPTAGLDPL + + L +G+T ++ TH
Sbjct: 145 ELSGGQMRRVAIAGILAMEPSILVLDEPTAGLDPLGRKELMTLFKKLHQSGMTIVLVTHL 204
Query: 120 IEE-ARHAHKV 129
+++ A +A++V
Sbjct: 205 MDDVAEYANQV 215
>sp|Q6LX68|ECFA_METMP Energy-coupling factor transporter ATP-binding protein EcfA
OS=Methanococcus maripaludis (strain S2 / LL) GN=ecfA
PE=3 SV=1
Length = 278
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 61 VSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHYI 120
+SGGQ++RI++A + +P +++LDEPT+GLDP+ + I + L L+ G+T II+TH +
Sbjct: 140 LSGGQKKRIAIAGILAMNPEIIVLDEPTSGLDPMGASQIMKLLYELNRQGITIIISTHDV 199
Query: 121 E 121
+
Sbjct: 200 D 200
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ+R++S+ + ++ +P +L+LDEPTAG+DP +W L+ A VT + +TH+
Sbjct: 614 KLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVT-VFSTHF 672
Query: 120 IEEA 123
++EA
Sbjct: 673 MDEA 676
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRT-LSATGVTCIITTH 118
++ G +R++ A++M+ +P + +LDEP+ G+DP +W+ +RT ++TTH
Sbjct: 1432 KLPAGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTH 1491
Query: 119 YIEEA 123
Y+EEA
Sbjct: 1492 YMEEA 1496
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTHY 119
++SGGQ+R++S+ + ++ +P +L+LDEPTAG+DP +W L+ A VT + +TH+
Sbjct: 614 KLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVT-VFSTHF 672
Query: 120 IEEA 123
++EA
Sbjct: 673 MDEA 676
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRT-LSATGVTCIITTH 118
++ G +R++ A++M+ +P + +LDEP+ G+DP +W+ +RT I+TTH
Sbjct: 1432 KLPAGIKRKLCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTH 1491
Query: 119 YIEEA 123
Y+EEA
Sbjct: 1492 YMEEA 1496
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 59 GQVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHLRTLSATGVTCIITTH 118
G SGG +RR+SVAV+++ P L+ LDEPT G+DP+ +W ++ + G I+TTH
Sbjct: 663 GSYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQE-TKKGRAIILTTH 721
Query: 119 YIEEA 123
+EEA
Sbjct: 722 SMEEA 726
>sp|Q9A6Z7|LOLD2_CAUCR Lipoprotein-releasing system ATP-binding protein LolD 2
OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=lolD2 PE=3 SV=1
Length = 228
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 60 QVSGGQQRRISVAVTMMHSPLLLILDEPTAGLDPLISDTIWQHL-RTLSATGVTCIITTH 118
Q+SGG+Q+R+++A + + P LL+ DEPT LDP S ++Q L + GV +I TH
Sbjct: 145 QMSGGEQQRVAIARALANRPKLLLADEPTGNLDPATSTAVFQALYQVCREQGVAAVIATH 204
Query: 119 YIEEARHAHKV 129
+E AR+ +V
Sbjct: 205 NMELARYMDRV 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,796,342
Number of Sequences: 539616
Number of extensions: 2148656
Number of successful extensions: 8307
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3627
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 3811
Number of HSP's gapped (non-prelim): 4584
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)