Query psy477
Match_columns 60
No_of_seqs 100 out of 283
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 17:15:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy477.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/477hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q87_B N6 adenine specific DNA 98.3 4.8E-06 1.7E-10 50.7 8.3 51 6-56 115-165 (170)
2 3evz_A Methyltransferase; NYSG 97.8 4.9E-05 1.7E-09 47.2 5.5 57 2-59 167-224 (230)
3 1l3i_A Precorrin-6Y methyltran 96.0 0.0037 1.3E-07 36.8 2.3 37 2-38 122-158 (192)
4 4dzr_A Protein-(glutamine-N5) 95.8 0.017 5.9E-07 34.5 4.8 51 2-52 152-204 (215)
5 3e05_A Precorrin-6Y C5,15-meth 95.6 0.0067 2.3E-07 36.9 2.4 36 2-37 130-165 (204)
6 3h2b_A SAM-dependent methyltra 95.6 0.04 1.4E-06 33.1 5.8 55 2-57 129-198 (203)
7 2zfu_A Nucleomethylin, cerebra 94.7 0.086 2.9E-06 32.0 5.5 51 2-55 139-191 (215)
8 3njr_A Precorrin-6Y methylase; 94.4 0.095 3.2E-06 32.3 5.3 37 2-38 142-178 (204)
9 3grz_A L11 mtase, ribosomal pr 94.4 0.063 2.2E-06 32.4 4.4 36 2-37 147-182 (205)
10 3lcc_A Putative methyl chlorid 94.2 0.067 2.3E-06 33.0 4.3 54 2-55 159-228 (235)
11 2a14_A Indolethylamine N-methy 94.2 0.24 8.3E-06 31.4 6.9 54 2-55 185-260 (263)
12 3lpm_A Putative methyltransfer 94.1 0.13 4.5E-06 32.5 5.5 53 2-55 164-219 (259)
13 2xyq_A Putative 2'-O-methyl tr 93.9 0.032 1.1E-06 37.4 2.5 53 2-54 159-212 (290)
14 1pjz_A Thiopurine S-methyltran 93.9 0.11 3.8E-06 31.8 4.7 40 2-42 128-178 (203)
15 2ex4_A Adrenal gland protein A 93.7 0.067 2.3E-06 33.2 3.5 52 2-53 173-238 (241)
16 2yxd_A Probable cobalt-precorr 93.6 0.12 3.9E-06 30.0 4.3 34 6-39 123-156 (183)
17 2nxc_A L11 mtase, ribosomal pr 93.6 0.09 3.1E-06 33.6 4.1 37 2-38 206-242 (254)
18 1yb2_A Hypothetical protein TA 92.5 0.17 5.7E-06 32.4 4.1 38 2-39 199-236 (275)
19 2nyu_A Putative ribosomal RNA 92.5 0.15 5.3E-06 30.2 3.7 54 2-56 133-190 (196)
20 3ou2_A SAM-dependent methyltra 92.4 0.22 7.5E-06 29.8 4.3 20 19-38 184-203 (218)
21 3sm3_A SAM-dependent methyltra 91.9 0.34 1.2E-05 29.1 4.9 21 19-39 186-206 (235)
22 2frn_A Hypothetical protein PH 91.9 0.29 1E-05 31.6 4.8 39 2-40 213-257 (278)
23 3e23_A Uncharacterized protein 91.8 0.93 3.2E-05 27.2 6.7 38 2-39 129-181 (211)
24 1xdz_A Methyltransferase GIDB; 91.7 1 3.5E-05 27.9 7.0 55 2-56 162-220 (240)
25 3hm2_A Precorrin-6Y C5,15-meth 91.6 0.22 7.4E-06 29.0 3.6 35 2-36 115-149 (178)
26 3cgg_A SAM-dependent methyltra 90.7 0.23 7.9E-06 28.9 3.1 36 2-37 135-172 (195)
27 2gb4_A Thiopurine S-methyltran 90.6 1.1 3.8E-05 28.7 6.6 39 2-41 179-228 (252)
28 1yzh_A TRNA (guanine-N(7)-)-me 90.5 0.16 5.5E-06 31.0 2.4 35 2-36 144-178 (214)
29 1xtp_A LMAJ004091AAA; SGPP, st 90.5 0.13 4.4E-06 31.7 1.9 51 2-52 185-250 (254)
30 3i9f_A Putative type 11 methyl 90.5 0.84 2.9E-05 26.4 5.4 50 2-56 100-161 (170)
31 3e8s_A Putative SAM dependent 90.1 0.55 1.9E-05 28.0 4.5 23 19-41 188-210 (227)
32 2i62_A Nicotinamide N-methyltr 90.0 1.8 6E-05 26.5 6.9 38 2-39 186-238 (265)
33 2ozv_A Hypothetical protein AT 89.7 0.73 2.5E-05 29.3 5.0 53 2-56 158-213 (260)
34 1vlm_A SAM-dependent methyltra 89.5 1.4 4.8E-05 26.7 6.1 39 2-40 127-188 (219)
35 2pwy_A TRNA (adenine-N(1)-)-me 89.4 0.22 7.6E-06 30.8 2.4 35 2-36 186-220 (258)
36 3dh0_A SAM dependent methyltra 89.2 1.6 5.6E-05 26.1 6.2 36 2-37 131-178 (219)
37 2g72_A Phenylethanolamine N-me 89.2 2.8 9.5E-05 26.5 7.6 40 2-41 203-257 (289)
38 2fca_A TRNA (guanine-N(7)-)-me 89.1 0.22 7.5E-06 30.8 2.2 34 2-35 141-174 (213)
39 3bzb_A Uncharacterized protein 89.0 0.33 1.1E-05 31.3 3.1 36 3-38 189-235 (281)
40 3g5l_A Putative S-adenosylmeth 89.0 0.3 1E-05 30.2 2.7 22 19-40 195-216 (253)
41 3gnl_A Uncharacterized protein 88.8 0.66 2.2E-05 30.5 4.5 43 9-51 118-163 (244)
42 1dus_A MJ0882; hypothetical pr 88.7 0.2 6.8E-06 29.2 1.7 36 2-37 145-180 (194)
43 2fpo_A Methylase YHHF; structu 88.6 0.46 1.6E-05 29.0 3.4 44 2-52 148-191 (202)
44 3hnr_A Probable methyltransfer 88.5 1.9 6.5E-05 25.8 6.1 51 2-56 133-213 (220)
45 2p7i_A Hypothetical protein; p 88.3 0.89 3E-05 27.4 4.5 36 2-37 129-196 (250)
46 1o54_A SAM-dependent O-methylt 87.2 0.28 9.7E-06 31.2 1.8 35 2-36 201-235 (277)
47 2b3t_A Protein methyltransfera 86.9 0.48 1.6E-05 30.1 2.8 47 2-49 226-272 (276)
48 1fbn_A MJ fibrillarin homologu 86.5 0.99 3.4E-05 27.8 4.1 36 2-38 166-211 (230)
49 1ej0_A FTSJ; methyltransferase 86.2 1.6 5.6E-05 24.5 4.7 31 2-33 124-154 (180)
50 3ujc_A Phosphoethanolamine N-m 86.0 1.2 4E-05 27.3 4.2 35 2-36 147-202 (266)
51 4htf_A S-adenosylmethionine-de 85.7 1.3 4.4E-05 27.9 4.3 40 2-41 161-233 (285)
52 2ift_A Putative methylase HI07 85.3 1.8 6.2E-05 26.2 4.8 43 2-52 151-193 (201)
53 3mb5_A SAM-dependent methyltra 85.0 0.24 8.3E-06 30.8 0.7 33 2-34 182-216 (255)
54 3g2m_A PCZA361.24; SAM-depende 84.8 3 0.0001 26.5 5.8 21 19-39 253-273 (299)
55 2ld4_A Anamorsin; methyltransf 84.8 2.1 7.1E-05 25.0 4.8 33 2-35 89-130 (176)
56 3l8d_A Methyltransferase; stru 84.4 1.6 5.5E-05 26.4 4.2 36 2-37 141-197 (242)
57 1jsx_A Glucose-inhibited divis 84.3 0.91 3.1E-05 27.1 3.0 32 2-36 153-184 (207)
58 3kr9_A SAM-dependent methyltra 84.3 2.8 9.6E-05 27.0 5.6 32 2-35 107-138 (225)
59 2esr_A Methyltransferase; stru 83.8 1.6 5.6E-05 25.3 4.0 46 2-54 126-171 (177)
60 3lec_A NADB-rossmann superfami 83.6 3.1 0.00011 26.9 5.6 31 3-35 114-144 (230)
61 1kpg_A CFA synthase;, cyclopro 83.0 2.9 0.0001 26.2 5.2 36 2-37 156-225 (287)
62 3jwg_A HEN1, methyltransferase 82.5 1.8 6.2E-05 26.0 3.9 36 2-37 129-189 (219)
63 3hem_A Cyclopropane-fatty-acyl 82.5 2.5 8.7E-05 26.9 4.8 36 2-37 171-240 (302)
64 3g89_A Ribosomal RNA small sub 82.2 2.7 9.4E-05 26.7 4.8 53 2-54 172-228 (249)
65 3f4k_A Putative methyltransfer 81.5 2.4 8.1E-05 26.0 4.2 35 2-36 138-192 (257)
66 4a4j_A Pacszia, cation-transpo 81.5 3.4 0.00012 20.2 4.3 29 8-36 40-68 (69)
67 3jwh_A HEN1; methyltransferase 81.1 1.6 5.4E-05 26.3 3.3 36 2-37 129-189 (217)
68 1wy7_A Hypothetical protein PH 80.8 2.3 7.9E-05 25.3 3.9 40 8-47 142-182 (207)
69 3vc1_A Geranyl diphosphate 2-C 80.5 2.4 8.1E-05 27.3 4.1 36 2-37 209-266 (312)
70 2ipx_A RRNA 2'-O-methyltransfe 80.4 2.3 8E-05 26.0 3.9 49 2-50 170-228 (233)
71 3dli_A Methyltransferase; PSI- 80.1 3.3 0.00011 25.3 4.5 35 2-36 128-180 (240)
72 3bkw_A MLL3908 protein, S-aden 80.0 2.1 7.3E-05 25.8 3.6 21 19-39 193-213 (243)
73 1y8c_A S-adenosylmethionine-de 79.9 1.9 6.5E-05 25.9 3.3 20 19-38 204-223 (246)
74 2yvl_A TRMI protein, hypotheti 79.7 1.6 5.5E-05 26.6 3.0 31 2-33 178-208 (248)
75 2plw_A Ribosomal RNA methyltra 79.6 4.2 0.00014 23.9 4.7 31 2-33 142-172 (201)
76 3m33_A Uncharacterized protein 79.5 2.5 8.4E-05 25.8 3.8 37 2-39 130-166 (226)
77 3p9n_A Possible methyltransfer 79.1 1 3.6E-05 26.7 1.9 44 2-52 141-184 (189)
78 2p35_A Trans-aconitate 2-methy 78.7 3.2 0.00011 25.3 4.2 18 19-36 169-186 (259)
79 3kkz_A Uncharacterized protein 78.2 2.8 9.6E-05 26.0 3.8 35 2-36 138-192 (267)
80 3dtn_A Putative methyltransfer 78.2 3.6 0.00012 24.8 4.2 23 20-42 194-216 (234)
81 1ri5_A MRNA capping enzyme; me 78.0 2.6 8.9E-05 26.2 3.6 18 19-36 229-246 (298)
82 3cc8_A Putative methyltransfer 77.6 6.5 0.00022 23.2 5.2 39 2-40 118-185 (230)
83 1vl5_A Unknown conserved prote 77.4 2.1 7.2E-05 26.4 3.1 38 2-39 128-189 (260)
84 2aot_A HMT, histamine N-methyl 77.4 1.5 5.2E-05 27.9 2.4 34 2-35 160-216 (292)
85 3opn_A Putative hemolysin; str 77.3 1.6 5.5E-05 27.7 2.5 40 2-41 125-185 (232)
86 3ccf_A Cyclopropane-fatty-acyl 76.6 3.7 0.00013 25.7 4.1 35 2-36 142-206 (279)
87 4fsd_A Arsenic methyltransfera 76.5 2.2 7.7E-05 28.5 3.2 39 2-40 191-252 (383)
88 3ckk_A TRNA (guanine-N(7)-)-me 76.2 0.88 3E-05 28.8 1.0 30 2-31 156-185 (235)
89 2fk8_A Methoxy mycolic acid sy 76.1 3.1 0.00011 26.6 3.6 17 2-18 182-198 (318)
90 2kw5_A SLR1183 protein; struct 75.9 4.7 0.00016 23.7 4.2 36 2-39 119-170 (202)
91 3iwl_A Copper transport protei 75.6 5.2 0.00018 19.9 3.8 22 17-38 45-66 (68)
92 1nkv_A Hypothetical protein YJ 75.4 2.7 9.1E-05 25.7 3.1 34 2-35 128-182 (256)
93 3bus_A REBM, methyltransferase 75.4 3.9 0.00013 25.3 3.9 35 2-36 154-212 (273)
94 3h11_A CAsp8 and FADD-like apo 74.1 2.2 7.7E-05 28.3 2.6 33 5-37 41-73 (272)
95 1xxl_A YCGJ protein; structura 74.0 5.5 0.00019 24.4 4.3 38 2-39 112-173 (239)
96 2fhp_A Methylase, putative; al 73.4 5.2 0.00018 23.0 3.9 43 2-51 142-184 (187)
97 2o57_A Putative sarcosine dime 73.1 5.3 0.00018 25.1 4.1 35 2-36 175-230 (297)
98 3dou_A Ribosomal RNA large sub 72.8 9.4 0.00032 23.1 5.1 52 2-54 127-182 (191)
99 1nt2_A Fibrillarin-like PRE-rR 71.7 8.7 0.0003 23.5 4.8 36 2-38 149-193 (210)
100 2qm3_A Predicted methyltransfe 71.7 9.7 0.00033 25.4 5.4 37 2-38 265-307 (373)
101 1wxx_A TT1595, hypothetical pr 71.1 2.9 0.0001 28.1 2.7 43 2-44 313-360 (382)
102 3dxy_A TRNA (guanine-N(7)-)-me 70.9 1.3 4.4E-05 27.6 0.8 32 2-33 138-170 (218)
103 3pfg_A N-methyltransferase; N, 69.8 3.5 0.00012 25.5 2.7 19 19-37 216-234 (263)
104 2g7j_A Putative cytoplasmic pr 69.7 2.4 8.1E-05 25.7 1.8 25 19-43 4-28 (124)
105 1j98_A Autoinducer-2 productio 69.5 5.1 0.00017 25.2 3.4 26 4-29 79-107 (157)
106 1i9g_A Hypothetical protein RV 69.2 1.5 5.2E-05 27.4 0.9 32 2-33 191-223 (280)
107 3ocj_A Putative exported prote 69.1 5.5 0.00019 25.4 3.6 20 19-38 270-289 (305)
108 3tma_A Methyltransferase; thum 68.5 14 0.00049 24.1 5.6 35 2-42 305-339 (354)
109 3mgg_A Methyltransferase; NYSG 68.1 6.2 0.00021 24.4 3.6 38 2-39 130-197 (276)
110 2pxx_A Uncharacterized protein 68.0 11 0.00037 22.0 4.5 29 2-32 147-175 (215)
111 1j6x_A Autoinducer-2 productio 67.9 5.8 0.0002 25.0 3.4 26 4-29 75-103 (160)
112 1vje_A Autoinducer-2 productio 67.6 5.9 0.0002 25.1 3.4 26 4-29 77-105 (166)
113 3hp7_A Hemolysin, putative; st 67.5 10 0.00035 25.3 4.7 50 2-51 173-248 (291)
114 1qzz_A RDMB, aclacinomycin-10- 67.1 13 0.00044 24.2 5.1 37 2-38 275-337 (374)
115 3mdo_A Putative phosphoribosyl 66.4 23 0.0008 24.8 6.6 38 7-44 337-374 (389)
116 3h11_B Caspase-8; cell death, 66.1 6.3 0.00022 25.9 3.5 32 6-37 16-68 (271)
117 3d2l_A SAM-dependent methyltra 66.0 7.4 0.00025 23.3 3.5 19 19-37 202-220 (243)
118 3gwz_A MMCR; methyltransferase 65.5 26 0.0009 23.1 7.0 36 2-37 295-353 (369)
119 1x19_A CRTF-related protein; m 65.2 17 0.00057 23.7 5.4 36 2-37 283-345 (359)
120 1j6w_A Autoinducer-2 productio 65.0 7 0.00024 25.0 3.4 26 4-29 78-106 (175)
121 2vdv_E TRNA (guanine-N(7)-)-me 64.9 2.5 8.5E-05 26.3 1.3 31 2-32 161-191 (246)
122 3mq2_A 16S rRNA methyltransfer 64.7 8.1 0.00028 23.1 3.5 36 2-37 128-181 (218)
123 1ixk_A Methyltransferase; open 63.9 5.3 0.00018 26.2 2.8 34 2-35 234-270 (315)
124 3a27_A TYW2, uncharacterized p 63.4 26 0.00088 22.2 6.3 51 2-52 207-267 (272)
125 4dcm_A Ribosomal RNA large sub 63.0 9.6 0.00033 25.8 4.0 46 2-54 322-367 (375)
126 3i53_A O-methyltransferase; CO 62.7 25 0.00086 22.5 5.9 47 2-52 262-329 (332)
127 2pjd_A Ribosomal RNA small sub 62.4 11 0.00037 24.7 4.1 26 2-27 291-316 (343)
128 1ws6_A Methyltransferase; stru 62.2 5.6 0.00019 22.5 2.4 18 2-19 135-152 (171)
129 4e2x_A TCAB9; kijanose, tetron 62.0 16 0.00054 24.3 4.9 38 2-39 196-252 (416)
130 3c0k_A UPF0064 protein YCCW; P 61.8 4.7 0.00016 27.1 2.3 44 2-45 327-375 (396)
131 3dlc_A Putative S-adenosyl-L-m 61.8 2.3 7.7E-05 25.1 0.6 16 20-35 183-198 (219)
132 2b25_A Hypothetical protein; s 61.5 5.1 0.00018 26.0 2.3 28 2-29 207-234 (336)
133 4hac_A Mevalonate kinase; GHMP 61.2 18 0.00062 23.7 5.0 30 6-36 281-310 (321)
134 3p2e_A 16S rRNA methylase; met 59.7 8.8 0.0003 23.8 3.2 35 2-37 127-182 (225)
135 1qtn_A Caspase-8; apoptosis, d 59.7 10 0.00035 23.3 3.4 33 5-37 21-74 (164)
136 3kiz_A Phosphoribosylformylgly 58.7 16 0.00054 25.8 4.6 37 7-43 339-375 (394)
137 3boe_A Cadmium-specific carbon 58.3 8.6 0.00029 25.0 2.9 26 19-44 3-28 (210)
138 3id6_C Fibrillarin-like rRNA/T 56.8 9.9 0.00034 24.3 3.1 35 3-38 170-214 (232)
139 2yxl_A PH0851 protein, 450AA l 56.8 9 0.00031 26.4 3.0 35 2-36 377-415 (450)
140 2nn3_C Caspase-1; cysteine pro 56.6 12 0.00041 25.2 3.6 32 6-37 59-103 (310)
141 1ve3_A Hypothetical protein PH 56.5 17 0.00058 21.4 3.9 14 2-15 130-143 (227)
142 3dxs_X Copper-transporting ATP 56.0 12 0.00042 18.4 2.8 21 18-38 51-71 (74)
143 3qv0_A Mitochondrial acidic pr 55.9 27 0.00091 22.8 5.1 34 17-50 32-73 (227)
144 2h54_A Caspase-1; allosteric s 55.7 16 0.00055 22.7 3.8 31 7-37 43-84 (178)
145 3od5_A Caspase-6; caspase doma 55.6 15 0.0005 24.2 3.8 32 6-37 20-65 (278)
146 3ofk_A Nodulation protein S; N 55.6 29 0.00099 20.4 5.4 53 2-54 142-203 (216)
147 2f8l_A Hypothetical protein LM 55.5 8 0.00027 25.4 2.5 36 2-37 244-283 (344)
148 2r3s_A Uncharacterized protein 55.5 11 0.00038 24.0 3.1 35 2-36 259-319 (335)
149 2igt_A SAM dependent methyltra 55.3 23 0.00079 23.5 4.8 34 2-35 260-299 (332)
150 2fi0_A Conserved domain protei 55.2 10 0.00036 20.5 2.6 17 19-35 62-78 (81)
151 1p91_A Ribosomal RNA large sub 55.0 3.3 0.00011 25.7 0.5 24 2-25 166-189 (269)
152 1m72_A Caspase-1; caspase, cys 54.4 8.9 0.0003 25.2 2.6 32 6-37 31-75 (272)
153 2p8j_A S-adenosylmethionine-de 53.7 19 0.00066 20.9 3.9 34 2-35 116-178 (209)
154 2zig_A TTHA0409, putative modi 53.4 5.3 0.00018 25.9 1.4 33 2-34 85-130 (297)
155 4df3_A Fibrillarin-like rRNA/T 53.0 7.1 0.00024 25.2 1.9 48 2-50 170-228 (233)
156 3sir_A Caspase; hydrolase; 2.6 52.8 15 0.00051 23.9 3.5 32 6-37 19-63 (259)
157 3bwc_A Spermidine synthase; SA 52.7 6.6 0.00022 25.6 1.7 34 2-35 198-235 (304)
158 2h00_A Methyltransferase 10 do 52.4 37 0.0013 20.7 7.0 33 3-35 201-233 (254)
159 2yx1_A Hypothetical protein MJ 52.4 27 0.00092 22.9 4.7 32 2-34 279-311 (336)
160 1cpz_A Protein (COPZ); copper 52.1 11 0.00038 17.6 2.2 19 18-36 49-67 (68)
161 3lst_A CALO1 methyltransferase 52.0 46 0.0016 21.6 6.7 38 2-39 274-335 (348)
162 3mti_A RRNA methylase; SAM-dep 51.8 27 0.00091 20.1 4.2 15 2-16 123-137 (185)
163 2zod_A Selenide, water dikinas 51.8 11 0.00038 25.0 2.8 31 11-41 307-337 (345)
164 3gu3_A Methyltransferase; alph 51.6 7.1 0.00024 24.6 1.7 15 2-16 114-128 (284)
165 2dko_A Caspase-3; low barrier 51.1 9.6 0.00033 23.0 2.2 32 6-37 15-60 (146)
166 1g60_A Adenine-specific methyl 51.0 7.4 0.00025 24.7 1.7 32 2-34 62-93 (260)
167 2v9y_A Phosphoribosylformylgly 49.9 22 0.00075 23.6 4.0 32 11-42 277-308 (334)
168 1kkh_A Mevalonate kinase; mixe 49.1 22 0.00074 22.7 3.8 28 7-35 284-311 (317)
169 2as0_A Hypothetical protein PH 48.4 5.8 0.0002 26.6 1.0 37 2-38 323-364 (396)
170 3p45_A Caspase-6; protease, hu 48.4 21 0.00073 22.4 3.6 33 5-37 42-88 (179)
171 3dmg_A Probable ribosomal RNA 48.1 27 0.00093 23.6 4.3 47 2-56 328-374 (381)
172 2ih2_A Modification methylase 48.0 11 0.00038 24.9 2.3 31 2-32 152-186 (421)
173 1nw9_B Caspase 9, apoptosis-re 47.8 24 0.00083 22.9 3.9 33 5-37 19-65 (277)
174 2xvm_A Tellurite resistance pr 47.8 16 0.00054 21.0 2.7 33 2-36 124-169 (199)
175 3k6r_A Putative transferase PH 47.3 24 0.00082 23.2 3.8 40 2-41 213-258 (278)
176 1pyo_A Caspase-2; apoptosis, c 46.8 25 0.00087 21.5 3.7 33 5-37 31-77 (167)
177 1boo_A Protein (N-4 cytosine-s 46.5 16 0.00054 24.1 2.8 33 2-34 72-114 (323)
178 4gek_A TRNA (CMO5U34)-methyltr 46.5 33 0.0011 21.7 4.3 12 2-13 166-177 (261)
179 2yqz_A Hypothetical protein TT 45.7 19 0.00066 21.7 3.0 13 2-14 129-141 (263)
180 1ne2_A Hypothetical protein TA 45.5 13 0.00046 21.8 2.2 39 8-48 140-178 (200)
181 3dp7_A SAM-dependent methyltra 45.5 23 0.00079 23.3 3.5 37 19-57 321-357 (363)
182 2ip2_A Probable phenazine-spec 45.4 47 0.0016 21.1 5.0 36 2-37 260-319 (334)
183 3eey_A Putative rRNA methylase 45.3 14 0.00049 21.5 2.3 52 2-53 127-188 (197)
184 2yyd_A Selenide, water dikinas 44.9 17 0.00059 24.3 2.9 38 11-49 307-344 (345)
185 3lvj_C Sulfurtransferase TUSA; 44.8 35 0.0012 18.2 6.0 33 4-36 34-66 (82)
186 3fry_A Probable copper-exporti 44.5 29 0.00099 17.1 3.3 19 19-37 50-68 (73)
187 4e16_A Precorrin-4 C(11)-methy 44.5 42 0.0014 21.2 4.6 46 8-53 161-208 (253)
188 2roe_A Heavy metal binding pro 43.8 26 0.0009 16.5 3.9 21 16-36 44-64 (66)
189 1tw3_A COMT, carminomycin 4-O- 43.1 64 0.0022 20.7 6.5 38 2-39 276-338 (360)
190 3p4e_A Phosphoribosylformylgly 43.0 28 0.00097 23.4 3.7 32 8-39 304-335 (349)
191 2l48_A N-acetylmuramoyl-L-alan 42.7 44 0.0015 18.9 4.0 20 19-38 31-50 (85)
192 3gon_A Phosphomevalonate kinas 42.4 28 0.00095 22.1 3.5 37 7-45 296-332 (335)
193 2fp3_A Caspase NC; apoptosis, 41.9 25 0.00087 23.5 3.3 32 6-37 60-103 (316)
194 1cc8_A Protein (metallochapero 41.6 32 0.0011 16.8 3.9 21 17-37 50-70 (73)
195 3fd5_A Selenide, water dikinas 41.3 52 0.0018 22.5 4.9 40 11-50 326-369 (394)
196 3m84_A Phosphoribosylformylgly 41.2 47 0.0016 22.2 4.6 33 10-42 310-343 (350)
197 4b93_A Vesicle-associated memb 41.0 19 0.00063 22.3 2.4 22 2-23 54-75 (189)
198 2j32_A Caspase-3; Pro-caspase3 40.7 28 0.00094 22.4 3.3 32 6-37 15-60 (250)
199 3mcz_A O-methyltransferase; ad 40.6 70 0.0024 20.4 5.8 35 2-36 275-335 (352)
200 2l3m_A Copper-ION-binding prot 40.2 20 0.00067 16.9 2.0 17 18-34 54-70 (71)
201 2yxz_A Thiamin-monophosphate k 38.9 56 0.0019 21.1 4.6 32 10-41 260-291 (311)
202 1g8a_A Fibrillarin-like PRE-rR 38.8 61 0.0021 19.2 5.1 15 2-16 166-180 (227)
203 4dmg_A Putative uncharacterize 38.8 22 0.00077 24.3 2.7 42 2-43 314-360 (393)
204 1zx0_A Guanidinoacetate N-meth 38.4 3.6 0.00012 25.2 -1.2 32 2-33 158-203 (236)
205 3u81_A Catechol O-methyltransf 38.0 64 0.0022 19.2 6.6 58 2-59 158-219 (221)
206 4afi_A AP-3 complex subunit de 38.0 22 0.00076 22.0 2.4 22 2-23 106-127 (173)
207 1je3_A EC005, hypothetical 8.6 37.9 54 0.0018 18.3 4.9 34 3-36 50-83 (97)
208 3ced_A Methionine import ATP-b 37.5 32 0.0011 19.0 2.8 30 8-37 64-95 (98)
209 3e4c_A Caspase-1; zymogen, inf 37.2 36 0.0012 22.7 3.5 31 7-37 60-101 (302)
210 2bm8_A Cephalosporin hydroxyla 37.0 12 0.00041 23.3 1.1 33 3-35 176-214 (236)
211 3mcq_A Thiamine-monophosphate 36.6 39 0.0013 22.1 3.6 32 11-42 263-294 (319)
212 3bw6_A Synaptobrevin homolog Y 36.5 32 0.0011 20.3 2.9 22 3-24 72-94 (144)
213 2f06_A Conserved hypothetical 36.1 50 0.0017 18.7 3.6 22 13-34 114-135 (144)
214 3hz7_A Uncharacterized protein 35.5 55 0.0019 17.8 3.8 31 6-36 28-58 (87)
215 2hwk_A Helicase NSP2; rossman 35.1 86 0.0029 21.7 5.1 53 2-56 242-300 (320)
216 2btu_A Phosphoribosyl-aminoimi 35.0 96 0.0033 20.4 5.8 35 8-42 300-334 (346)
217 3kyq_A YKT6, synaptobrevin hom 34.9 33 0.0011 21.6 2.9 21 3-23 70-90 (199)
218 3v97_A Ribosomal RNA large sub 34.9 8.1 0.00028 28.5 -0.0 40 2-42 645-684 (703)
219 3ajd_A Putative methyltransfer 34.6 18 0.00061 22.9 1.6 33 2-34 199-235 (274)
220 1kvd_B SMK toxin; halotolerant 34.3 58 0.002 17.6 4.0 38 17-54 22-62 (77)
221 2nut_C Vesicle-trafficking pro 34.1 28 0.00095 21.4 2.4 22 3-24 64-85 (196)
222 2ql9_A Caspase-7; cysteine pro 34.0 17 0.00059 22.6 1.4 32 6-37 43-88 (173)
223 2xmm_A SSR2857 protein, ATX1; 33.7 35 0.0012 15.4 2.3 18 17-34 46-63 (64)
224 3u0o_A Selenide, water dikinas 32.9 23 0.00078 23.7 2.0 29 11-39 305-333 (347)
225 3cjk_B Copper-transporting ATP 32.8 44 0.0015 15.8 3.5 19 19-37 52-70 (75)
226 3reo_A (ISO)eugenol O-methyltr 32.4 1.1E+02 0.0036 20.1 7.0 33 20-55 335-367 (368)
227 3dhx_A Methionine import ATP-b 31.8 59 0.002 18.1 3.4 33 7-39 64-97 (106)
228 1aw0_A Menkes copper-transport 31.3 29 0.001 16.2 1.8 18 19-36 53-70 (72)
229 1osd_A MERP, hypothetical prot 31.3 32 0.0011 16.1 2.0 19 18-36 52-70 (72)
230 1f1j_A Caspase-7 protease; cas 30.2 23 0.0008 23.7 1.7 20 18-37 94-113 (305)
231 1gml_A T-complex protein 1 sub 30.2 67 0.0023 19.5 3.7 26 30-55 135-160 (178)
232 3m4x_A NOL1/NOP2/SUN family pr 29.5 43 0.0015 23.5 3.0 34 2-35 222-258 (456)
233 2qif_A Copper chaperone COPZ; 29.0 39 0.0013 15.2 2.0 17 18-34 51-67 (69)
234 1sqg_A SUN protein, FMU protei 29.0 36 0.0012 23.0 2.5 33 2-34 362-398 (429)
235 1o9g_A RRNA methyltransferase; 28.8 33 0.0011 20.9 2.1 12 2-13 202-213 (250)
236 3qwu_A DNA ligase; structural 28.7 1.5E+02 0.0051 20.7 5.7 37 16-54 312-350 (370)
237 3m70_A Tellurite resistance pr 28.6 45 0.0015 20.6 2.7 32 2-35 211-255 (286)
238 2z01_A Phosphoribosylformylgly 28.5 1.2E+02 0.0042 19.9 5.0 35 8-42 302-336 (348)
239 2crl_A Copper chaperone for su 28.1 73 0.0025 16.9 4.1 22 17-38 63-84 (98)
240 2p41_A Type II methyltransfera 28.0 51 0.0018 21.5 3.0 28 2-29 179-208 (305)
241 3pyf_A 4-diphosphocytidyl-2-C- 27.8 56 0.0019 21.3 3.2 34 4-37 254-288 (306)
242 2xmw_A PACS-N, cation-transpor 27.6 53 0.0018 15.1 4.0 19 18-36 51-69 (71)
243 2b78_A Hypothetical protein SM 27.6 50 0.0017 22.1 3.0 32 2-33 319-355 (385)
244 1nv8_A HEMK protein; class I a 27.3 51 0.0018 21.1 2.9 28 2-30 237-264 (284)
245 3ggd_A SAM-dependent methyltra 27.0 44 0.0015 20.0 2.4 15 2-16 151-165 (245)
246 2gs9_A Hypothetical protein TT 26.8 22 0.00076 20.8 1.0 19 2-20 120-138 (211)
247 2vx8_A Nucleoporin-like protei 26.6 57 0.0019 20.0 2.9 21 3-23 97-117 (169)
248 2qip_A Protein of unknown func 26.0 69 0.0024 18.9 3.1 33 9-41 110-143 (165)
249 2kt2_A Mercuric reductase; nme 26.0 58 0.002 15.0 4.4 19 18-36 48-66 (69)
250 4gzv_A Hypothetical protein; A 25.9 34 0.0012 21.1 1.7 15 1-15 38-52 (142)
251 3lfk_A MSCTV, MARR like protei 25.7 38 0.0013 20.1 1.8 28 18-48 64-91 (129)
252 2qrr_A Methionine import ATP-b 25.7 79 0.0027 17.2 3.2 30 8-37 67-97 (101)
253 2rb9_A HYPE protein; hydrogena 25.2 66 0.0023 21.2 3.2 35 7-42 270-306 (334)
254 2oi2_A Mevalonate kinase; enzy 25.0 34 0.0012 21.3 1.7 29 6-34 258-286 (292)
255 2oxt_A Nucleoside-2'-O-methylt 24.9 17 0.00059 23.4 0.2 28 2-29 171-202 (265)
256 1whz_A Hypothetical protein; a 24.9 66 0.0023 16.4 2.6 16 19-34 6-21 (70)
257 3bkx_A SAM-dependent methyltra 24.6 85 0.0029 19.0 3.4 16 20-35 199-214 (275)
258 2ldi_A Zinc-transporting ATPas 24.5 60 0.0021 14.7 2.3 17 19-35 53-69 (71)
259 1va0_A Uroporphyrin-III C-meth 24.5 91 0.0031 19.2 3.6 41 12-52 156-198 (239)
260 1fvq_A Copper-transporting ATP 24.3 64 0.0022 14.9 3.9 20 18-37 50-69 (72)
261 2ybo_A Methyltransferase; SUMT 24.2 1.4E+02 0.0047 19.3 4.6 46 7-52 185-232 (294)
262 3bxo_A N,N-dimethyltransferase 24.2 73 0.0025 18.7 3.0 19 19-37 206-224 (239)
263 3sr3_A Microcin immunity prote 24.2 62 0.0021 21.7 2.9 34 3-36 9-49 (336)
264 2yxe_A Protein-L-isoaspartate 24.0 21 0.00073 21.0 0.5 16 2-17 165-180 (215)
265 2jmk_A Hypothetical protein TA 23.7 37 0.0013 19.9 1.5 17 20-36 93-109 (111)
266 2gcx_A FEOA, ferrous iron tran 23.4 84 0.0029 16.0 4.8 48 4-51 3-52 (75)
267 1s4d_A Uroporphyrin-III C-meth 22.6 1.5E+02 0.0053 18.9 4.5 45 8-52 177-223 (280)
268 2qsw_A Methionine import ATP-b 22.4 65 0.0022 17.5 2.3 30 8-37 67-97 (100)
269 1kvi_A Copper-transporting ATP 22.4 54 0.0019 15.7 1.9 18 19-36 58-75 (79)
270 3tla_A MCCF; serine protease, 22.3 70 0.0024 21.9 2.9 34 3-36 39-79 (371)
271 3hdp_A Glyoxalase-I; glutathio 22.2 97 0.0033 16.3 3.7 28 8-35 76-103 (133)
272 3ac6_A Phosphoribosylformylgly 21.5 1.4E+02 0.005 21.8 4.6 32 10-41 307-338 (725)
273 3k17_A LIN0012 protein; protei 21.3 68 0.0023 21.4 2.7 27 8-34 320-346 (365)
274 1cbf_A Cobalt-precorrin-4 tran 21.3 1.5E+02 0.0052 18.9 4.3 44 9-52 178-223 (285)
275 1p32_A Mitochondrial matrix pr 21.2 1E+02 0.0034 19.3 3.3 16 35-50 44-59 (209)
276 2a4v_A Peroxiredoxin DOT5; yea 21.2 90 0.0031 17.4 2.9 32 5-38 66-97 (159)
277 3p9c_A Caffeic acid O-methyltr 21.2 1.8E+02 0.0062 19.0 6.8 18 20-37 333-350 (364)
278 1yg0_A COP associated protein; 21.2 72 0.0025 14.3 2.6 15 19-33 50-64 (66)
279 2gjf_A Designed protein; proca 21.1 97 0.0033 15.9 3.4 31 8-38 46-76 (78)
280 3rjz_A N-type ATP pyrophosphat 21.0 98 0.0033 20.0 3.3 22 19-40 127-148 (237)
281 2h7a_A Hypothetical protein YC 21.0 53 0.0018 19.4 1.8 19 17-35 67-85 (110)
282 1y3j_A Copper-transporting ATP 20.8 69 0.0024 15.3 2.1 18 19-36 53-70 (77)
283 3vti_C Hydrogenase maturation 20.2 1.4E+02 0.0048 19.3 4.0 39 7-47 250-290 (314)
284 2y8l_A 5'-AMP-activated protei 20.1 1.5E+02 0.0052 18.7 4.0 29 10-38 19-51 (173)
285 1jdq_A TM006 protein, hypothet 20.1 1.2E+02 0.0043 16.7 5.9 33 4-36 50-82 (98)
No 1
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.32 E-value=4.8e-06 Score=50.71 Aligned_cols=51 Identities=33% Similarity=0.612 Sum_probs=48.3
Q ss_pred CCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477 6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~ 56 (60)
|+|.++++....+.++++.+.+++.||....+.+++.++|++++++.+++-
T Consensus 115 pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~~~~ 165 (170)
T 3q87_B 115 TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKSH 165 (170)
T ss_dssp CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEECC-
T ss_pred CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEEeccc
Confidence 999999999999999999999999999999999999999999999999863
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.79 E-value=4.9e-05 Score=47.24 Aligned_cols=57 Identities=19% Similarity=0.130 Sum_probs=44.5
Q ss_pred ceecCCCeEEEEEecc-CCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCCCc
Q psy477 2 DSLSDKGILYLLVIKE-NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEK 59 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~-N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~~~ 59 (60)
++|+|+|.+++++... +..+++.+.+++.||..+.+ +...++....+++|.|++++.
T Consensus 167 ~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~g~~~~~~l~f~~~~~~~ 224 (230)
T 3evz_A 167 DHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDI-KFKVGTRWRHSLIFFKGISEG 224 (230)
T ss_dssp GGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEE-EECCCC-CEEEEEEECCC---
T ss_pred HHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEE-EecCCCeEEEEEEEecccccc
Confidence 5799999999987654 45788999999999988865 557788999999999987653
No 3
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.00 E-value=0.0037 Score=36.82 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=31.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
++|+|+|.+++......+.+++.+.+++.||..+++.
T Consensus 122 ~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 158 (192)
T 1l3i_A 122 DKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNITE 158 (192)
T ss_dssp HTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEEE
Confidence 4689999999988888889999999999999776543
No 4
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=95.83 E-value=0.017 Score=34.51 Aligned_cols=51 Identities=6% Similarity=-0.002 Sum_probs=39.0
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHh--hCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLS--QYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~--~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
++|+|+|.++++....+..+++.+.+. +.||....+.....+.+.+.+.+.
T Consensus 152 ~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~ 204 (215)
T 4dzr_A 152 YVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 204 (215)
T ss_dssp GGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEE
T ss_pred HHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEE
Confidence 579999997777777888999999999 899976555555666666655543
No 5
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.62 E-value=0.0067 Score=36.93 Aligned_cols=36 Identities=17% Similarity=0.335 Sum_probs=31.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|++++.....+..+++.+.+++.||..++.
T Consensus 130 ~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 165 (204)
T 3e05_A 130 RRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVA 165 (204)
T ss_dssp HHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEE
Confidence 468999999999888888999999999999966643
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.58 E-value=0.04 Score=33.10 Aligned_cols=55 Identities=11% Similarity=-0.000 Sum_probs=41.7
Q ss_pred ceecCCCeEEEEEeccC---------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCC
Q psy477 2 DSLSDKGILYLLVIKEN---------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCD 57 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~ 57 (60)
+.|+|+|.+++...... .++++.+.+++.||....+..+.. .-+-++..+...+.
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~p~~~l~~~~~~~~ 198 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR-FPHAYLTAEASLEH 198 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT-SSEEEEEEEECC--
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC-Ccchhhhhhhhhhh
Confidence 46899999988875543 389999999999999887666555 77778777776543
No 7
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=94.72 E-value=0.086 Score=31.98 Aligned_cols=51 Identities=14% Similarity=0.375 Sum_probs=36.5
Q ss_pred ceecCCCeEEEEEecc--CCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477 2 DSLSDKGILYLLVIKE--NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~--N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~ 55 (60)
++|+|+|.+++..... ..++++.+.+++.||.... ........+++.+.+.
T Consensus 139 ~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~---~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 139 RVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS---KDLTNSHFFLFDFQKT 191 (215)
T ss_dssp HHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE---EECCSTTCEEEEEEEC
T ss_pred HhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE---EecCCCeEEEEEEEec
Confidence 4689999988875544 4689999999999998543 3444555566666664
No 8
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.45 E-value=0.095 Score=32.35 Aligned_cols=37 Identities=5% Similarity=-0.115 Sum_probs=31.6
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
+.|+|+|++++.....++..++.+.+++.|++..-+.
T Consensus 142 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 142 EWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred HhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEEE
Confidence 4689999999999888889999999999998866443
No 9
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=94.45 E-value=0.063 Score=32.43 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=31.0
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++.....+..+++.+.+++.||....+
T Consensus 147 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 147 SHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp GGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred HhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 578999999998777888999999999999987643
No 10
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=94.25 E-value=0.067 Score=32.97 Aligned_cols=54 Identities=22% Similarity=0.191 Sum_probs=40.4
Q ss_pred ceecCCCeEEEEEeccC----------CHHHHHHHHhhCCceEEEEEE------EeeCCeEEEEEEEEeC
Q psy477 2 DSLSDKGILYLLVIKEN----------DPEDIIHCLSQYGFMGKTLLT------RQVPGEKLSVLKFTRS 55 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N----------~p~ei~~~~~~~G~~~~vv~~------rk~~~E~L~Vlr~~r~ 55 (60)
+.|+|+|.++++..... .++++.+.+++.||....+.. .+.+.|.+..+|+.+.
T Consensus 159 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~~ 228 (235)
T 3lcc_A 159 ELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKINL 228 (235)
T ss_dssp HHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEESCC
T ss_pred HHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCccccccCHHHHhhhhhccc
Confidence 46899999888765432 478999999999999765544 3455788888887653
No 11
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=94.18 E-value=0.24 Score=31.39 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=36.6
Q ss_pred ceecCCCeEEEEEeccC---------------CHHHHHHHHhhCCceEEEEEEEe--e-----CCeEEEEEEEEeC
Q psy477 2 DSLSDKGILYLLVIKEN---------------DPEDIIHCLSQYGFMGKTLLTRQ--V-----PGEKLSVLKFTRS 55 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------------~p~ei~~~~~~~G~~~~vv~~rk--~-----~~E~L~Vlr~~r~ 55 (60)
++|.|+|.+.+...-.. .++++.+.+.+.||....+..-. . ..+.++.+.+.|.
T Consensus 185 r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 185 SLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred HHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 57999999988753221 58899999999999876554421 1 1345666666654
No 12
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.11 E-value=0.13 Score=32.54 Aligned_cols=53 Identities=15% Similarity=0.178 Sum_probs=38.4
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE---EeeCCeEEEEEEEEeC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT---RQVPGEKLSVLKFTRS 55 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~---rk~~~E~L~Vlr~~r~ 55 (60)
++|+|+|+++++. .....+++.+.+++.||....+.. +.-......++.+.+.
T Consensus 164 ~~LkpgG~l~~~~-~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 164 SLLKQGGKANFVH-RPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp HHEEEEEEEEEEE-CTTTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred HHccCCcEEEEEE-cHHHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 4689999999865 445688899999999998765443 2223445778888775
No 13
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=93.95 E-value=0.032 Score=37.43 Aligned_cols=53 Identities=8% Similarity=0.068 Sum_probs=39.4
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCce-EEEEEEEeeCCeEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM-GKTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~-~~vv~~rk~~~E~L~Vlr~~r 54 (60)
++|+|+|.|++......+.+++.+.+++.||. ++++.+|.-..|...+=+-++
T Consensus 159 r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~~~ 212 (290)
T 2xyq_A 159 QKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGANYL 212 (290)
T ss_dssp HHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEEEC
T ss_pred HhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCCcc
Confidence 46999999999877777788999999999886 445545666666665555444
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=93.86 E-value=0.11 Score=31.85 Aligned_cols=40 Identities=5% Similarity=0.003 Sum_probs=29.8
Q ss_pred ceecCCCeEEEEEeccC-----------CHHHHHHHHhhCCceEEEEEEEee
Q psy477 2 DSLSDKGILYLLVIKEN-----------DPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----------~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
++|+|+|.++++..... .++++.+.+.+ ||+...+.....
T Consensus 128 r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 128 ALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp HHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred HHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 46899999887776542 37889998888 998776655443
No 15
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=93.69 E-value=0.067 Score=33.18 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=35.6
Q ss_pred ceecCCCeEEEEEeccC--------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN--------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFT 53 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~ 53 (60)
++|+|+|++++...... .++++.+.+++.||....+.......+.++-++++
T Consensus 173 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~v~~~ 238 (241)
T 2ex4_A 173 GSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSF 238 (241)
T ss_dssp HHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCCTTSCEEEEE
T ss_pred HhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCcchhhhhhhh
Confidence 46899999888543211 58999999999999877665554444544444443
No 16
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=93.64 E-value=0.12 Score=30.04 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=29.9
Q ss_pred CCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477 6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
|+|.+++.....++..++.+.+++.||.++.+..
T Consensus 123 ~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 123 KINHIVANTIVLENAAKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEecccccHHHHHHHHHHcCCeEEEEEe
Confidence 8999999988888889999999999999887654
No 17
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=93.59 E-value=0.09 Score=33.56 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=31.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
++|+|+|.+++.-......+++.+.+++.||....+.
T Consensus 206 ~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 206 EALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp HHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence 4689999999987778889999999999999876543
No 18
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=92.50 E-value=0.17 Score=32.37 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=30.2
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+.|+|+|++++.....+..+++.+.+++.||....+.+
T Consensus 199 ~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 199 SMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp HTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 46899999999887776778899999999998554433
No 19
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=92.48 E-value=0.15 Score=30.21 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=32.3
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCce-EEEEE---EEeeCCeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM-GKTLL---TRQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~-~~vv~---~rk~~~E~L~Vlr~~r~~ 56 (60)
++|+|+|++++......+..++.+.++.. |. .+++. +|....|...|-+..+..
T Consensus 133 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~~e~~~v~~g~~~~ 190 (196)
T 2nyu_A 133 DILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKESSEVYFLATQYHGR 190 (196)
T ss_dssp HHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC--------EEEEEEEECCC
T ss_pred HHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccCceEEEEeeecCCc
Confidence 47899999988877666677888877763 43 33322 455667877777766643
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=92.39 E-value=0.22 Score=29.79 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=16.4
Q ss_pred CHHHHHHHHhhCCceEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~ 38 (60)
.++++.+.+++.||.+++..
T Consensus 184 ~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 184 SPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEeee
Confidence 68999999999999965533
No 21
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.92 E-value=0.34 Score=29.15 Aligned_cols=21 Identities=10% Similarity=0.184 Sum_probs=17.8
Q ss_pred CHHHHHHHHhhCCceEEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~ 39 (60)
.++++.+.+++.||....+..
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEe
Confidence 689999999999999776554
No 22
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=91.90 E-value=0.29 Score=31.58 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=30.7
Q ss_pred ceecCCCeEEEEEecc------CCHHHHHHHHhhCCceEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE------NDPEDIIHCLSQYGFMGKTLLTR 40 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~------N~p~ei~~~~~~~G~~~~vv~~r 40 (60)
+.|+|+|++++...+. ...+++.+.+++.||.++++..|
T Consensus 213 ~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~ 257 (278)
T 2frn_A 213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNEL 257 (278)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEeeeE
Confidence 4689999999887763 34678888889999999885543
No 23
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=91.76 E-value=0.93 Score=27.17 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=29.9
Q ss_pred ceecCCCeEEEEEeccC--------------CHHHHHHHHhhCC-ceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN--------------DPEDIIHCLSQYG-FMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------~p~ei~~~~~~~G-~~~~vv~~ 39 (60)
++|+|+|.+++...... .++++.+.+++.| |....+..
T Consensus 129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 46899999988765543 6899999999999 99665544
No 24
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=91.74 E-value=1 Score=27.94 Aligned_cols=55 Identities=7% Similarity=0.116 Sum_probs=32.9
Q ss_pred ceecCCCeEEEEEeccC--CHHHHHHHHhhCCceEEEEEEEeeC--CeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKEN--DPEDIIHCLSQYGFMGKTLLTRQVP--GEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~~~G~~~~vv~~rk~~--~E~L~Vlr~~r~~ 56 (60)
++|+|+|.+++.-.... ..+++.+.+++.||....+..-..+ .+.-+++.+.+..
T Consensus 162 ~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 162 PLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIK 220 (240)
T ss_dssp GGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred HhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecC
Confidence 57999999987643322 1335667788899987655443333 2444555555543
No 25
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=91.62 E-value=0.22 Score=28.95 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=29.4
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|.+++......+...+.+.+++.|+....
T Consensus 115 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 115 KRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp HTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred HhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 46899999998888888888899999998877553
No 26
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.66 E-value=0.23 Score=28.92 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=28.8
Q ss_pred ceecCCCeEEEEEeccC--CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN--DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++...... .++++.+.+++.||....+
T Consensus 135 ~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 135 RALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred HHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence 46889999988776554 5889999999999986644
No 27
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=90.61 E-value=1.1 Score=28.67 Aligned_cols=39 Identities=8% Similarity=-0.018 Sum_probs=28.7
Q ss_pred ceecCCCeEEEEEecc-----------CCHHHHHHHHhhCCceEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKE-----------NDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~-----------N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
++|+|+|+++++.... -.|+++.+.+.. +|+...+.+..
T Consensus 179 ~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 179 SLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp HTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEeccc
Confidence 5799999998876542 247899998887 68877665543
No 28
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=90.53 E-value=0.16 Score=31.02 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=25.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++..-..+..+++.+.+.+.||....
T Consensus 144 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 144 RILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp HHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 46899999888653333457778888888988654
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=90.52 E-value=0.13 Score=31.69 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=34.1
Q ss_pred ceecCCCeEEEEEec---------------cCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIK---------------ENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~---------------~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
++|+|+|.+++..-. .-.++++.+.+++.||....+.......+.++.+++
T Consensus 185 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~ 250 (254)
T 1xtp_A 185 QALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQEEWPTDLFPLKM 250 (254)
T ss_dssp HHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECTTCCTTSCCEEE
T ss_pred HhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeecCCCCchhheEEE
Confidence 468999998887621 114689999999999997665554444444444443
No 30
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=90.46 E-value=0.84 Score=26.37 Aligned_cols=50 Identities=18% Similarity=0.211 Sum_probs=32.4
Q ss_pred ceecCCCeEEEEEeccC------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKEN------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~ 56 (60)
+.|+|+|.+++...... .++++.+.++ ||.... .... .+..+.+=+++.+
T Consensus 100 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~--~~~~-~~~~~~l~~~~~~ 161 (170)
T 3i9f_A 100 RILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEK--RFNP-TPYHFGLVLKRKT 161 (170)
T ss_dssp HHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEE--EECS-STTEEEEEEEECC
T ss_pred HhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEE--ccCC-CCceEEEEEecCC
Confidence 46899999988865443 3678888887 987543 2333 4445566666544
No 31
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=90.06 E-value=0.55 Score=28.00 Aligned_cols=23 Identities=17% Similarity=0.127 Sum_probs=18.8
Q ss_pred CHHHHHHHHhhCCceEEEEEEEe
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
.++++.+.+++.||...-+....
T Consensus 188 ~~~~~~~~l~~aGf~~~~~~~~~ 210 (227)
T 3e8s_A 188 TLASWLNALDMAGLRLVSLQEPQ 210 (227)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCC
T ss_pred cHHHHHHHHHHcCCeEEEEecCC
Confidence 68999999999999987665533
No 32
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=89.99 E-value=1.8 Score=26.54 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=28.7
Q ss_pred ceecCCCeEEEEEecc---------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE---------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
++|+|+|.+++..... -+++++.+.+.+.||....+..
T Consensus 186 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 186 SLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 5789999988865321 2577999999999998765554
No 33
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=89.66 E-value=0.73 Score=29.34 Aligned_cols=53 Identities=15% Similarity=0.155 Sum_probs=35.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE---EeeCCeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT---RQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~---rk~~~E~L~Vlr~~r~~ 56 (60)
++|+|+|.++++.-.. ...++.+.+++. |....+.. +.-..-.++++.+.+..
T Consensus 158 ~~LkpgG~l~~~~~~~-~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 158 AIMVSGGQLSLISRPQ-SVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp HHEEEEEEEEEEECGG-GHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred HHcCCCCEEEEEEcHH-HHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 4689999999987655 567788888875 76443333 22223357788888754
No 34
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=89.54 E-value=1.4 Score=26.70 Aligned_cols=39 Identities=15% Similarity=0.343 Sum_probs=29.2
Q ss_pred ceecCCCeEEEEEeccC-----------------------CHHHHHHHHhhCCceEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN-----------------------DPEDIIHCLSQYGFMGKTLLTR 40 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----------------------~p~ei~~~~~~~G~~~~vv~~r 40 (60)
+.|+|+|.+++.....+ .++++.+.+++.||....+...
T Consensus 127 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 127 RILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 46889999988765432 4688899999999987655443
No 35
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=89.41 E-value=0.22 Score=30.76 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=28.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|.++++....+...++.+.+++.||....
T Consensus 186 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 186 LALKPDRFLVAYLPNITQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEE
T ss_pred HhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEE
Confidence 46899999998887776788899999999998543
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=89.24 E-value=1.6 Score=26.05 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=27.8
Q ss_pred ceecCCCeEEEEEeccC------------CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN------------DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------~p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|.+++...... .++++.+.+++.||+...+
T Consensus 131 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 131 RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 46899999988764332 4799999999999985543
No 37
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=89.23 E-value=2.8 Score=26.50 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=29.7
Q ss_pred ceecCCCeEEEEEec---------------cCCHHHHHHHHhhCCceEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIK---------------ENDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~---------------~N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
++|+|+|.+++...- .-.++++.+.+++.||....+....
T Consensus 203 r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 203 TLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp TTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 579999998886321 1258999999999999876655544
No 38
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=89.08 E-value=0.22 Score=30.78 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=25.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.+++..-..+-.+.+.+.+.+.||...
T Consensus 141 ~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 141 EVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp HHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 4689999998876444446778888888898643
No 39
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=89.01 E-value=0.33 Score=31.29 Aligned_cols=36 Identities=8% Similarity=0.201 Sum_probs=27.1
Q ss_pred eec---C--CCeEEEEEeccCC-----HHHHHHHHhhCC-ceEEEEE
Q psy477 3 SLS---D--KGILYLLVIKEND-----PEDIIHCLSQYG-FMGKTLL 38 (60)
Q Consensus 3 ~Ls---~--~G~~YLv~~~~N~-----p~ei~~~~~~~G-~~~~vv~ 38 (60)
+|+ | +|++|++.+..+. ..++.+.+++.| |.++.+.
T Consensus 189 ~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 189 LLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp HBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEE
T ss_pred HhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEec
Confidence 566 8 9999998877542 467888889999 9998774
No 40
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=88.98 E-value=0.3 Score=30.24 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=18.3
Q ss_pred CHHHHHHHHhhCCceEEEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTR 40 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~r 40 (60)
.++++.+.+++.||....+.+-
T Consensus 195 t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 195 TVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp CHHHHHHHHHHTTEEEEEEECC
T ss_pred CHHHHHHHHHHcCCeeeeeecC
Confidence 6799999999999998766543
No 41
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=88.84 E-value=0.66 Score=30.49 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=33.7
Q ss_pred eEEEEEeccCCHHHHHHHHhhCCceE---EEEEEEeeCCeEEEEEE
Q psy477 9 ILYLLVIKENDPEDIIHCLSQYGFMG---KTLLTRQVPGEKLSVLK 51 (60)
Q Consensus 9 ~~YLv~~~~N~p~ei~~~~~~~G~~~---~vv~~rk~~~E~L~Vlr 51 (60)
..++|++...+.+.+.+.|.+.||.. .+|.+..-+.|-|.+-+
T Consensus 118 ~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~ 163 (244)
T 3gnl_A 118 VTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAP 163 (244)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEcCCChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 46788889899999999999999997 56666666666666543
No 42
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=88.75 E-value=0.2 Score=29.17 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=28.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++.........++.+.|++.....+++
T Consensus 145 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 145 ELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp HHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred HHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence 468999999999988888888999988874355543
No 43
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.58 E-value=0.46 Score=29.00 Aligned_cols=44 Identities=11% Similarity=0.109 Sum_probs=32.0
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
++|+|+|++++.....+...+. ..+|. ++..++++.+++.+++.
T Consensus 148 ~~L~pgG~l~i~~~~~~~~~~~-----~~~~~--~~~~~~~g~~~~~~~~~ 191 (202)
T 2fpo_A 148 GWLADEALIYVESEVENGLPTV-----PANWS--LHREKVAGQVAYRLYQR 191 (202)
T ss_dssp TCEEEEEEEEEEEEGGGCSCCC-----CTTEE--EEEEEEETTEEEEEEEE
T ss_pred CccCCCcEEEEEECCCcccccc-----CCcce--EEeeeccCCEEEEEEEE
Confidence 4699999999888776654321 23554 66788999999998864
No 44
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=88.51 E-value=1.9 Score=25.78 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=33.4
Q ss_pred ceecCCCeEEEEEeccC------------------------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN------------------------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLK 51 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------------------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr 51 (60)
++|+|+|.+++...... .++++.+.+++.||+... ... .....++.
T Consensus 133 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~---~~~-~~~~w~~~ 208 (220)
T 3hnr_A 133 QLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF---TRL-NHFVWVME 208 (220)
T ss_dssp HHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE---EEC-SSSEEEEE
T ss_pred HhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE---eec-cceEEEEe
Confidence 46899999988753322 357888999999997443 222 24556666
Q ss_pred EEeCC
Q psy477 52 FTRSC 56 (60)
Q Consensus 52 ~~r~~ 56 (60)
..+++
T Consensus 209 ~~~~~ 213 (220)
T 3hnr_A 209 ATKQL 213 (220)
T ss_dssp EEECS
T ss_pred ehhhh
Confidence 55544
No 45
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=88.31 E-value=0.89 Score=27.38 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=27.6
Q ss_pred ceecCCCeEEEEEeccC--------------------------------CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN--------------------------------DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------------------------~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++...... .++++.+.+++.||....+
T Consensus 129 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 129 DWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp TTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 57899999988774322 5778899999999986644
No 46
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=87.19 E-value=0.28 Score=31.17 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=28.9
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|++++.....+..+++.+.|++.||....
T Consensus 201 ~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 201 EALKGGGRFATVCPTTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeE
Confidence 46899999999887777788999999999997443
No 47
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=86.91 E-value=0.48 Score=30.15 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=32.2
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSV 49 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~V 49 (60)
++|+|+|.+++. .....++++.+.+++.||....+..--.+.+...+
T Consensus 226 ~~LkpgG~l~~~-~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~ 272 (276)
T 2b3t_A 226 NALVSGGFLLLE-HGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTL 272 (276)
T ss_dssp GGEEEEEEEEEE-CCSSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEE
T ss_pred HhcCCCCEEEEE-ECchHHHHHHHHHHHCCCcEEEEEecCCCCCcEEE
Confidence 478999997765 44556899999999999974333333444555444
No 48
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=86.52 E-value=0.99 Score=27.82 Aligned_cols=36 Identities=19% Similarity=0.040 Sum_probs=23.1
Q ss_pred ceecCCCeEEEEEec-cCC---------HHHHHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVIK-END---------PEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~-~N~---------p~ei~~~~~~~G~~~~vv~ 38 (60)
+.|+|+|.++++.-. .++ ++++. .+.+.||....+.
T Consensus 166 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 166 WFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp HHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred HhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 468999999998432 111 14555 7788899755433
No 49
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=86.21 E-value=1.6 Score=24.50 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=25.6
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~ 33 (60)
++|+|+|.+++.........++.+.+++. |.
T Consensus 124 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~ 154 (180)
T 1ej0_A 124 DVLAPGGSFVVKVFQGEGFDEYLREIRSL-FT 154 (180)
T ss_dssp HHEEEEEEEEEEEESSTTHHHHHHHHHHH-EE
T ss_pred HHcCCCcEEEEEEecCCcHHHHHHHHHHh-hh
Confidence 46899999999888888888888888874 54
No 50
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=85.96 E-value=1.2 Score=27.29 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=27.2
Q ss_pred ceecCCCeEEEEEeccC---------------------CHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKEN---------------------DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++...... .++++.+.+++.||....
T Consensus 147 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 147 KWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp HHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 46899999988865333 478899999999998654
No 51
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=85.66 E-value=1.3 Score=27.90 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=29.3
Q ss_pred ceecCCCeEEEEEecc---------------------------------CCHHHHHHHHhhCCceEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKE---------------------------------NDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------------------------N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
++|+|+|++++..... -.++++.+.+++.||...-+..-+
T Consensus 161 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 161 SVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 4689999998877421 236899999999999976554433
No 52
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=85.31 E-value=1.8 Score=26.22 Aligned_cols=43 Identities=12% Similarity=0.144 Sum_probs=30.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
++|+|+|++++.....+ ..+ ...+|. ++.+|+++...+.+++.
T Consensus 151 ~~LkpgG~l~i~~~~~~-~~~-----~~~~~~--~~~~~~yG~~~~~~~~~ 193 (201)
T 2ift_A 151 NWLKPNALIYVETEKDK-PLI-----TPENWT--LLKEKTTGIVSYRLYQN 193 (201)
T ss_dssp TCEEEEEEEEEEEESSS-CCC-----CCTTEE--EEEEEEETTEEEEEEEE
T ss_pred CccCCCcEEEEEECCCC-Ccc-----ccchhH--HHHHHhcCCEEEEEEec
Confidence 46999999988876665 111 113554 56789999998888764
No 53
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=84.97 E-value=0.24 Score=30.76 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=27.9
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCC--ceE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYG--FMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G--~~~ 34 (60)
+.|+|+|.+++.....+..+++.+.+++.| |..
T Consensus 182 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 182 KALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMK 216 (255)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSC
T ss_pred HHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 468999999888877777889999999999 753
No 54
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=84.83 E-value=3 Score=26.49 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=17.1
Q ss_pred CHHHHHHHHhhCCceEEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~ 39 (60)
.++++.+.+++.||...-+..
T Consensus 253 t~~el~~ll~~aGF~v~~~~~ 273 (299)
T 3g2m_A 253 APDQVVRELVRSGFDVIAQTP 273 (299)
T ss_dssp CHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEe
Confidence 688999999999998765544
No 55
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=84.81 E-value=2.1 Score=24.96 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=24.5
Q ss_pred ceecCCCeEEEEEeccC---------CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN---------DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.+++.--... .++++.+.+++.|| .+
T Consensus 89 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 89 RILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp HHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred HHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 57899999888422111 27899999999999 66
No 56
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=84.39 E-value=1.6 Score=26.44 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=27.5
Q ss_pred ceecCCCeEEEEEecc---------------------CCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKE---------------------NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------------N~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++..... -.|+++.+.+++.||....+
T Consensus 141 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 141 RVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp HHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 4689999998887432 34678999999999986543
No 57
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=84.33 E-value=0.91 Score=27.05 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=21.6
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|.+++.... +..+++.+.+. ||....
T Consensus 153 ~~L~~gG~l~~~~~~-~~~~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 153 HLPGEQGRFYALKGQ-MPEDEIALLPE--EYQVES 184 (207)
T ss_dssp TSEEEEEEEEEEESS-CCHHHHHTSCT--TEEEEE
T ss_pred HhcCCCcEEEEEeCC-CchHHHHHHhc--CCceee
Confidence 578999998876443 45666666554 887543
No 58
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=84.33 E-value=2.8 Score=26.99 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=25.3
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
+.|.++|+ +|++..++.+.+.+.|.++||...
T Consensus 107 ~~L~~~~~--lVlq~~~~~~~vr~~L~~~Gf~i~ 138 (225)
T 3kr9_A 107 GKLANVER--LILQPNNREDDLRIWLQDHGFQIV 138 (225)
T ss_dssp GGCTTCCE--EEEEESSCHHHHHHHHHHTTEEEE
T ss_pred HHhCCCCE--EEEECCCCHHHHHHHHHHCCCEEE
Confidence 35666654 666777899999999999999854
No 59
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=83.81 E-value=1.6 Score=25.32 Aligned_cols=46 Identities=11% Similarity=-0.108 Sum_probs=32.2
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r 54 (60)
+.|+|+|++++.........+ ...+|. ...+|+++...+.++++..
T Consensus 126 ~~L~~gG~l~~~~~~~~~~~~-----~~~~~~--~~~~~~yg~~~~~~~~~~~ 171 (177)
T 2esr_A 126 NLLSEQVMVVCETDKTVLLPK-----EIATLG--IWKEKIYGISKVTVYVNEG 171 (177)
T ss_dssp TCEEEEEEEEEEEETTCCCCS-----EETTEE--EEEEEEETTEEEEEEEETT
T ss_pred CCcCCCcEEEEEECCcccccc-----ccCceE--EEEeeecCcEEEEEEEecc
Confidence 678999999888776654332 223554 4567889998888887643
No 60
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=83.59 E-value=3.1 Score=26.92 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=25.6
Q ss_pred eecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 3 SLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
.|.+.| ++|++..++.+.+.+.|.+.||...
T Consensus 114 ~l~~~~--~lIlqp~~~~~~lr~~L~~~Gf~i~ 144 (230)
T 3lec_A 114 KLQHVK--TLVLQPNNREDDLRKWLAANDFEIV 144 (230)
T ss_dssp GGTTCC--EEEEEESSCHHHHHHHHHHTTEEEE
T ss_pred HhCcCC--EEEEECCCChHHHHHHHHHCCCEEE
Confidence 455555 7888888999999999999999854
No 61
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=83.03 E-value=2.9 Score=26.17 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=26.9
Q ss_pred ceecCCCeEEEEEeccC----------------------------------CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN----------------------------------DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N----------------------------------~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++...... .++++.+.+++.||....+
T Consensus 156 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 225 (287)
T 1kpg_A 156 RLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRV 225 (287)
T ss_dssp HHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEE
T ss_pred HhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence 46899999988765432 4677888888899986544
No 62
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=82.47 E-value=1.8 Score=25.99 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=24.1
Q ss_pred ceecCCCeEEEEEeccC---------------------CHHHHH----HHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN---------------------DPEDII----HCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~----~~~~~~G~~~~vv 37 (60)
+.|+|+|+++....... .++++. +.+++.||.++..
T Consensus 129 ~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 129 EFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp TTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 46899996554443322 567777 6677789988764
No 63
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=82.45 E-value=2.5 Score=26.86 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=26.8
Q ss_pred ceecCCCeEEEEEeccCC----------------------------------HHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEND----------------------------------PEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~----------------------------------p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++......+ ++++.+.+++.||....+
T Consensus 171 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~ 240 (302)
T 3hem_A 171 NLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERY 240 (302)
T ss_dssp HSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred HhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence 479999999998875443 446777788888876544
No 64
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=82.20 E-value=2.7 Score=26.65 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=30.5
Q ss_pred ceecCCCeEEEEEecc--CCHHHHHHHHhhCCceEEEEEEEeeCC--eEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKE--NDPEDIIHCLSQYGFMGKTLLTRQVPG--EKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~--N~p~ei~~~~~~~G~~~~vv~~rk~~~--E~L~Vlr~~r 54 (60)
++|+|+|+++++.-.. ...+++.+.+.+.||...-+..-..++ +.=+++-+.+
T Consensus 172 ~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 172 PFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp GGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 5789999987655321 113344566677899877665544443 3334444444
No 65
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=81.54 E-value=2.4 Score=25.98 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=26.3
Q ss_pred ceecCCCeEEEEEec--------------------cCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIK--------------------ENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~--------------------~N~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++.... ...++++.+.+++.||....
T Consensus 138 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 138 KYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp TTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred HHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 578999999888643 12467888899999998654
No 66
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=81.46 E-value=3.4 Score=20.24 Aligned_cols=29 Identities=10% Similarity=0.208 Sum_probs=21.3
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+...+......+++++.+.+++.||.+++
T Consensus 40 ~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 40 EQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp TEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 44433333556799999999999999875
No 67
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=81.14 E-value=1.6 Score=26.30 Aligned_cols=36 Identities=6% Similarity=-0.028 Sum_probs=24.3
Q ss_pred ceecCCCeEEEEEeccC---------------------CHHHHH----HHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN---------------------DPEDII----HCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~----~~~~~~G~~~~vv 37 (60)
++|+|+|+++....... .++++. +.+++.||.++..
T Consensus 129 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 129 EFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp TTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEE
Confidence 46899996555543321 567777 7777889987754
No 68
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=80.80 E-value=2.3 Score=25.28 Aligned_cols=40 Identities=18% Similarity=0.139 Sum_probs=27.8
Q ss_pred CeEEEEEe-ccCCHHHHHHHHhhCCceEEEEEEEeeCCeEE
Q psy477 8 GILYLLVI-KENDPEDIIHCLSQYGFMGKTLLTRQVPGEKL 47 (60)
Q Consensus 8 G~~YLv~~-~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L 47 (60)
|.+|++.. ..+..+.+.+.+.+.||..+++....++.++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 182 (207)
T 1wy7_A 142 DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHRLTTKIEIPLQ 182 (207)
T ss_dssp SEEEEEEECCHHHHHHHHHHHHHTTEEEEEEEEEEEEEC--
T ss_pred CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEEEEEecCCccc
Confidence 66776653 44446777888899999999888877664443
No 69
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=80.46 E-value=2.4 Score=27.27 Aligned_cols=36 Identities=11% Similarity=0.095 Sum_probs=26.8
Q ss_pred ceecCCCeEEEEEeccC----------------------CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN----------------------DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N----------------------~p~ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.+++.....+ .++++.+.+++.||....+
T Consensus 209 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 209 RFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp HHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred HHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 47899999988764333 3678888999999986543
No 70
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=80.41 E-value=2.3 Score=26.01 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=28.1
Q ss_pred ceecCCCeEEEEEeccC-----CHHHH----HHHHhhCCceEEEEEE-EeeCCeEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN-----DPEDI----IHCLSQYGFMGKTLLT-RQVPGEKLSVL 50 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----~p~ei----~~~~~~~G~~~~vv~~-rk~~~E~L~Vl 50 (60)
+.|+|+|.+++.+-..+ .+..+ ++.|++.||....+.. ......+..|+
T Consensus 170 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~ 228 (233)
T 2ipx_A 170 TFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVV 228 (233)
T ss_dssp HHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEE
T ss_pred HHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEE
Confidence 46899999999544321 12222 5777888998654333 22334444444
No 71
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=80.06 E-value=3.3 Score=25.32 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=26.3
Q ss_pred ceecCCCeEEEEEeccC------------------CHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKEN------------------DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------------~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++...... .++++.+.+++.||....
T Consensus 128 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 128 SKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp HHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred HHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 47899999988776433 357788888889998543
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=79.98 E-value=2.1 Score=25.81 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=17.1
Q ss_pred CHHHHHHHHhhCCceEEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~ 39 (60)
.++++.+.+++.||....+.+
T Consensus 193 t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 193 TVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp CHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHcCCEeeeecc
Confidence 478899999999999776554
No 73
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=79.94 E-value=1.9 Score=25.94 Aligned_cols=20 Identities=20% Similarity=0.051 Sum_probs=16.4
Q ss_pred CHHHHHHHHhhCCceEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~ 38 (60)
.++++.+.+++.||....+.
T Consensus 204 ~~~~l~~ll~~aGf~~~~~~ 223 (246)
T 1y8c_A 204 KEEDIEKYLKHGQLNILDKV 223 (246)
T ss_dssp CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEE
Confidence 68999999999999866543
No 74
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=79.66 E-value=1.6 Score=26.59 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=25.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~ 33 (60)
+.|+|+|.+++.....+...++.+.+++. |.
T Consensus 178 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 178 KSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp HHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 46899999999987777788888888876 65
No 75
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=79.55 E-value=4.2 Score=23.94 Aligned_cols=31 Identities=10% Similarity=0.124 Sum_probs=23.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~ 33 (60)
++|+|+|.+++.+....+..++...++. .|.
T Consensus 142 ~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~ 172 (201)
T 2plw_A 142 QYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQ 172 (201)
T ss_dssp HHEEEEEEEEEEEECSTTHHHHHHHHHT-TEE
T ss_pred HHccCCCEEEEEEeCCCCHHHHHHHHHH-HHh
Confidence 4789999998877666667888888776 354
No 76
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=79.48 E-value=2.5 Score=25.84 Aligned_cols=37 Identities=8% Similarity=-0.034 Sum_probs=28.0
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+.|+|+|.++ .......++++.+.+.+.||....+..
T Consensus 130 ~~LkpgG~l~-~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 130 ELAAPDAHFL-YVGPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp HHEEEEEEEE-EEESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCcEEE-EeCCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 4689999988 333444688999999999998765443
No 77
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=79.08 E-value=1 Score=26.67 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=30.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
++|+|+|++++-....+...+.. .+| +.+.+++++..++.+++.
T Consensus 141 ~~L~pgG~l~~~~~~~~~~~~~~-----~~~--~~~~~~~yg~~~~~~~~~ 184 (189)
T 3p9n_A 141 GWTREGTVAVVERATTCAPLTWP-----EGW--RRWPQRVYGDTRLELAER 184 (189)
T ss_dssp SSCCTTCEEEEEEETTSCCCCCC-----TTE--EECCCEEETTEEEEEEEE
T ss_pred CccCCCeEEEEEecCCCCCccCC-----Cce--EEEEEcccCcEEEEEecc
Confidence 37999999988777665432221 134 556778999988887764
No 78
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=78.70 E-value=3.2 Score=25.31 Aligned_cols=18 Identities=22% Similarity=0.202 Sum_probs=14.0
Q ss_pred CHHHHHHHHhhCCceEEE
Q psy477 19 DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~v 36 (60)
+++++.+.|++.||.+++
T Consensus 169 ~~~~~~~~l~~aGf~v~~ 186 (259)
T 2p35_A 169 PPSDYFNALSPKSSRVDV 186 (259)
T ss_dssp CHHHHHHHHGGGEEEEEE
T ss_pred CHHHHHHHHHhcCCceEE
Confidence 467788888899997554
No 79
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=78.23 E-value=2.8 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=26.0
Q ss_pred ceecCCCeEEEEEecc--------------------CCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKE--------------------NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~--------------------N~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|++++..... ..++++.+.+++.||....
T Consensus 138 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 138 KYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp GGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred HHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 5799999998876531 1366788888999988653
No 80
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=78.23 E-value=3.6 Score=24.84 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=15.8
Q ss_pred HHHHHHHHhhCCceEEEEEEEee
Q psy477 20 PEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
++++.+.+++.||..-.+.-+..
T Consensus 194 ~~~~~~ll~~aGF~~v~~~~~~~ 216 (234)
T 3dtn_A 194 MNQQLNWLKEAGFRDVSCIYKYY 216 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEET
T ss_pred HHHHHHHHHHcCCCceeeeeeec
Confidence 46677789999998655544444
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=78.01 E-value=2.6 Score=26.23 Aligned_cols=18 Identities=11% Similarity=0.171 Sum_probs=13.0
Q ss_pred CHHHHHHHHhhCCceEEE
Q psy477 19 DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~v 36 (60)
.|+++.+.+++.||+...
T Consensus 229 ~~~~l~~ll~~aGf~~v~ 246 (298)
T 1ri5_A 229 DFTRMVDGFKRLGLSLVE 246 (298)
T ss_dssp CHHHHHHHHHTTTEEEEE
T ss_pred CHHHHHHHHHHcCCEEEE
Confidence 357888888888887543
No 82
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=77.59 E-value=6.5 Score=23.19 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=28.4
Q ss_pred ceecCCCeEEEEEec-----------------------------cCCHHHHHHHHhhCCceEEEEEEE
Q psy477 2 DSLSDKGILYLLVIK-----------------------------ENDPEDIIHCLSQYGFMGKTLLTR 40 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~-----------------------------~N~p~ei~~~~~~~G~~~~vv~~r 40 (60)
+.|+|+|.+++..-. .-.++++.+.+++.||....+...
T Consensus 118 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 118 PYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp GGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 568899998886532 124788999999999986655443
No 83
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=77.41 E-value=2.1 Score=26.44 Aligned_cols=38 Identities=24% Similarity=0.235 Sum_probs=26.3
Q ss_pred ceecCCCeEEEEEecc------------------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE------------------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~------------------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
++|+|+|.+++..... -.++++.+.+++.||....+..
T Consensus 128 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 128 RVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp HHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred HHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 4689999998863211 2356778888888998665444
No 84
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=77.40 E-value=1.5 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.364 Sum_probs=25.4
Q ss_pred ceecCCCeEEEEEeccC-----------------------CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN-----------------------DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----------------------~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.+.++....+ .++++.+.+++.||...
T Consensus 160 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 216 (292)
T 2aot_A 160 SLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYE 216 (292)
T ss_dssp HTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEE
T ss_pred HHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceE
Confidence 57999999988764432 36678888888899754
No 85
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=77.33 E-value=1.6 Score=27.66 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=27.4
Q ss_pred ceecCCCeEEEEEec---------------------cCCHHHHHHHHhhCCceEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIK---------------------ENDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~---------------------~N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
++|+|+|.+++++-. ...++++.+.+++.||...-+....
T Consensus 125 rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 125 EILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp HHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred HhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEcc
Confidence 579999999886311 0124577888888999977655433
No 86
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=76.65 E-value=3.7 Score=25.72 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=24.2
Q ss_pred ceecCCCeEEEEEeccC------------------------------CHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKEN------------------------------DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------------------------~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++.....+ .++++.+.+++.||....
T Consensus 142 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 206 (279)
T 3ccf_A 142 QALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTY 206 (279)
T ss_dssp HHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEE
T ss_pred HhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEE
Confidence 46899999888765432 355667777777887543
No 87
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=76.52 E-value=2.2 Score=28.53 Aligned_cols=39 Identities=23% Similarity=0.292 Sum_probs=28.0
Q ss_pred ceecCCCeEEEEEeccC----------------------CHHHHHHHHhhCCce-EEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN----------------------DPEDIIHCLSQYGFM-GKTLLTR 40 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N----------------------~p~ei~~~~~~~G~~-~~vv~~r 40 (60)
++|+|+|.+++.....+ .++++.+.+++.||. .+++..+
T Consensus 191 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~ 252 (383)
T 4fsd_A 191 RVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVSVG 252 (383)
T ss_dssp HHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEEEE
T ss_pred HHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEecc
Confidence 47899999888654332 248899999999996 4454444
No 88
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=76.18 E-value=0.88 Score=28.76 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=22.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYG 31 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G 31 (60)
++|+|+|.+++..-..+-.+.+++.+.+.|
T Consensus 156 ~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 156 YVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred HHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 479999999887644444567777888776
No 89
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=76.09 E-value=3.1 Score=26.59 Aligned_cols=17 Identities=6% Similarity=0.069 Sum_probs=13.2
Q ss_pred ceecCCCeEEEEEeccC
Q psy477 2 DSLSDKGILYLLVIKEN 18 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N 18 (60)
++|+|+|.+++......
T Consensus 182 ~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 182 NIMPADGRMTVQSSVSY 198 (318)
T ss_dssp HHSCTTCEEEEEEEECC
T ss_pred HhcCCCcEEEEEEeccC
Confidence 46899999998776543
No 90
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=75.95 E-value=4.7 Score=23.72 Aligned_cols=36 Identities=14% Similarity=0.052 Sum_probs=26.3
Q ss_pred ceecCCCeEEEEEecc----------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE----------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~----------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+.|+|+|.+++..... -.++++.+.+. ||+...+..
T Consensus 119 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 119 QGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp TTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred HhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 5689999998886432 24678888887 998765544
No 91
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=75.57 E-value=5.2 Score=19.89 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=19.1
Q ss_pred cCCHHHHHHHHhhCCceEEEEE
Q psy477 17 ENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
..+++++.+.+++.||.+..+.
T Consensus 45 ~~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 45 EHSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp SSCHHHHHHHHHTTCSCEEEEE
T ss_pred cCCHHHHHHHHHHcCCceEecC
Confidence 4579999999999999998764
No 92
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=75.41 E-value=2.7 Score=25.72 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=25.1
Q ss_pred ceecCCCeEEEEEecc---------------------CCHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKE---------------------NDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------------N~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.+++..... -.++++.+.+++.||...
T Consensus 128 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 128 QSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp TSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred HHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeE
Confidence 5799999988864321 135788899999999853
No 93
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=75.38 E-value=3.9 Score=25.27 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=25.6
Q ss_pred ceecCCCeEEEEEeccC------------------------CHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKEN------------------------DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------------------------~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++...... .++++.+.+++.||....
T Consensus 154 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 154 RVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTS 212 (273)
T ss_dssp TTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEE
Confidence 57899999988764322 247788888889998653
No 94
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=74.09 E-value=2.2 Score=28.28 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=29.4
Q ss_pred cCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477 5 SDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 5 s~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv 37 (60)
.|+|.+.++--..+|.+.+.+.+++.||++.+.
T Consensus 41 ~~rG~~LIinn~~~D~~~L~~~f~~LgF~V~~~ 73 (272)
T 3h11_A 41 KPLGICLIIDCIGNETELLRDTFTSLGYEVQKF 73 (272)
T ss_dssp SSSEEEEEEESSCCCCSHHHHHHHHHTEEEEEE
T ss_pred CcceEEEEECCchHHHHHHHHHHHHCCCEEEEe
Confidence 478999999999999999999999999998764
No 95
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=73.96 E-value=5.5 Score=24.38 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=26.2
Q ss_pred ceecCCCeEEEEEecc------------------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE------------------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~------------------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
++|+|+|.+++..... -.++++.+.+++.||....+..
T Consensus 112 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 112 RVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp HHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 4689999988864321 2367778888888998654443
No 96
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=73.37 E-value=5.2 Score=23.04 Aligned_cols=43 Identities=5% Similarity=-0.018 Sum_probs=28.8
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLK 51 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr 51 (60)
++|+|+|++++.........+. ..+|. .+..++++...+.+++
T Consensus 142 ~~L~~gG~l~~~~~~~~~~~~~-----~~~~~--~~~~~~~g~~~~~~~~ 184 (187)
T 2fhp_A 142 QLLTNEAVIVCETDKTVKLPET-----IGTLK--KTRETVYGITQVTIYR 184 (187)
T ss_dssp TCEEEEEEEEEEEETTCCCCSE-----ETTEE--EEEEEEETTEEEEEEE
T ss_pred cccCCCCEEEEEeCCccccccc-----ccchh--hhhhhccCceEEEEEE
Confidence 5689999988877665543221 13554 4567888888888776
No 97
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=73.05 E-value=5.3 Score=25.10 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=25.4
Q ss_pred ceecCCCeEEEEEecc---------------------CCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKE---------------------NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------------N~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.+++..... ..++++.+.+++.||....
T Consensus 175 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 230 (297)
T 2o57_A 175 RVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLR 230 (297)
T ss_dssp HHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEE
T ss_pred HHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEE
Confidence 4689999998876432 1467778888889997543
No 98
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=72.77 E-value=9.4 Score=23.07 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=30.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceE----EEEEEEeeCCeEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMG----KTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~----~vv~~rk~~~E~L~Vlr~~r 54 (60)
++|.|+|.+++.+-...+..++...++. .|.- +...+|....|.-.|=+-.+
T Consensus 127 ~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~~~~ 182 (191)
T 3dou_A 127 RYLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFFGFK 182 (191)
T ss_dssp HHEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEEEEECC------CCEEEEEEEEEC
T ss_pred HHccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEeeec
Confidence 4799999998877665556778888866 3542 23345777666655555444
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=71.73 E-value=8.7 Score=23.53 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=23.7
Q ss_pred ceecCCCeEEEEEe-----ccCCHHHHH----HHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVI-----KENDPEDII----HCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~-----~~N~p~ei~----~~~~~~G~~~~vv~ 38 (60)
++|+|+|.+++++- ...+|+++. +.+++. |......
T Consensus 149 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~ 193 (210)
T 1nt2_A 149 FFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHG 193 (210)
T ss_dssp HHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEE
T ss_pred HHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeee
Confidence 47999999998851 233578875 336777 7755433
No 100
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=71.66 E-value=9.7 Score=25.39 Aligned_cols=37 Identities=14% Similarity=0.282 Sum_probs=25.1
Q ss_pred ceecCCCeE-EEEEec-cCCH---HHHHHHHh-hCCceEEEEE
Q psy477 2 DSLSDKGIL-YLLVIK-ENDP---EDIIHCLS-QYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~-YLv~~~-~N~p---~ei~~~~~-~~G~~~~vv~ 38 (60)
+.|.|+|++ ++.+.. ...+ +++.+.+. +.||....+.
T Consensus 265 ~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 265 ATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp HTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 468999954 555544 2456 77778887 8898876543
No 101
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=71.12 E-value=2.9 Score=28.05 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=29.3
Q ss_pred ceecCCCeEEEEEeccCCHH-----HHHHHHhhCCceEEEEEEEeeCC
Q psy477 2 DSLSDKGILYLLVIKENDPE-----DIIHCLSQYGFMGKTLLTRQVPG 44 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~-----ei~~~~~~~G~~~~vv~~rk~~~ 44 (60)
++|+|+|.+++..++.+-.. .+.+.+.+.|...+++..+..+.
T Consensus 313 ~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~ 360 (382)
T 1wxx_A 313 KLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPF 360 (382)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEECCCT
T ss_pred HhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEcCCCCC
Confidence 57899999988887654322 23345667788888877665543
No 102
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=70.90 E-value=1.3 Score=27.62 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=22.3
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhC-Cce
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQY-GFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~-G~~ 33 (60)
++|+|+|.+++..-..+-.+++.+.+... +|.
T Consensus 138 r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 138 SKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE
T ss_pred HHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc
Confidence 46999999988875444456677777654 454
No 103
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=69.81 E-value=3.5 Score=25.49 Aligned_cols=19 Identities=11% Similarity=0.144 Sum_probs=16.0
Q ss_pred CHHHHHHHHhhCCceEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv 37 (60)
.++++.+.+++.||....+
T Consensus 216 t~~el~~ll~~aGF~v~~~ 234 (263)
T 3pfg_A 216 TREQYERAFTAAGLSVEFM 234 (263)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred cHHHHHHHHHHCCCEEEEe
Confidence 4899999999999986654
No 104
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=69.69 E-value=2.4 Score=25.67 Aligned_cols=25 Identities=16% Similarity=0.405 Sum_probs=21.2
Q ss_pred CHHHHHHHHhhCCceEEEEEEEeeC
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTRQVP 43 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~rk~~ 43 (60)
.|+||.+.+++.||....|..+-.+
T Consensus 4 RPDEVArVLEk~GF~~D~vt~kaYG 28 (124)
T 2g7j_A 4 RPDEVARVLEKAGFTVDVVTNKTYG 28 (124)
T ss_dssp CHHHHHHHHHHTTCEEEEEETTEEE
T ss_pred ChHHHHHHHHHcCceEEEeeccccc
Confidence 5999999999999999988765443
No 105
>1j98_A Autoinducer-2 production protein LUXS; autoinducer synthesis, signaling protein; 1.20A {Bacillus subtilis} SCOP: d.185.1.2 PDB: 1jqw_A 1jvi_A* 1ie0_A 2fqo_A* 2fqt_A* 1ycl_A*
Probab=69.54 E-value=5.1 Score=25.21 Aligned_cols=26 Identities=31% Similarity=0.524 Sum_probs=22.2
Q ss_pred ecCCCe---EEEEEeccCCHHHHHHHHhh
Q psy477 4 LSDKGI---LYLLVIKENDPEDIIHCLSQ 29 (60)
Q Consensus 4 Ls~~G~---~YLv~~~~N~p~ei~~~~~~ 29 (60)
.||=|| |||++.-+-++++|++.+++
T Consensus 79 ~sPMGCrTGFYl~l~G~~~~~~v~~~~~~ 107 (157)
T 1j98_A 79 ISPMGCQTGYYLVVSGETTSAEIVDLLED 107 (157)
T ss_dssp EEECTTSSEEEEEEEECCCHHHHHHHHHH
T ss_pred eCCcCcccccEEEEeCCCCHHHHHHHHHH
Confidence 467777 99999999999999988766
No 106
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=69.22 E-value=1.5 Score=27.41 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=25.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhh-CCce
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQ-YGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~-~G~~ 33 (60)
+.|+|+|.+++.....+...++++.+++ .||.
T Consensus 191 ~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 191 RLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred HhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 4689999998888766667788888877 6775
No 107
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=69.12 E-value=5.5 Score=25.42 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.3
Q ss_pred CHHHHHHHHhhCCceEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~ 38 (60)
.++++.+.+++.||....+.
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEE
Confidence 58899999999999865444
No 108
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=68.52 E-value=14 Score=24.14 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=22.9
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
+.|+|+|.++++.. +++.+.+.++ .||+.. .+++.
T Consensus 305 ~~LkpgG~l~i~t~---~~~~~~~~~~-~g~~~~--~~~~l 339 (354)
T 3tma_A 305 ALLPPGGRVALLTL---RPALLKRALP-PGFALR--HARVV 339 (354)
T ss_dssp HTSCTTCEEEEEES---CHHHHHHHCC-TTEEEE--EEEEC
T ss_pred HhcCCCcEEEEEeC---CHHHHHHHhh-cCcEEE--EEEEE
Confidence 46889999998864 4555555555 777654 45555
No 109
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=68.09 E-value=6.2 Score=24.42 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=25.8
Q ss_pred ceecCCCeEEEEEecc------------------------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE------------------------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~------------------------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
++|+|+|.+++..... ..+.++.+.|++.||..-.+..
T Consensus 130 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 130 KVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp HHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 4689999988865321 1236777788889998654443
No 110
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=68.01 E-value=11 Score=21.98 Aligned_cols=29 Identities=14% Similarity=0.096 Sum_probs=19.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCc
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGF 32 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~ 32 (60)
++|+|+|.++++. .+.|.-....+...|+
T Consensus 147 ~~LkpgG~li~~~--~~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 147 RVLVPGGRFISMT--SAAPHFRTRHYAQAYY 175 (215)
T ss_dssp HHEEEEEEEEEEE--SCCHHHHHHHHCCGGG
T ss_pred HhCcCCCEEEEEe--CCCcHHHHHHHhcccc
Confidence 4689999876654 4556656666666665
No 111
>1j6x_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.38A {Helicobacter pylori} SCOP: d.185.1.2
Probab=67.89 E-value=5.8 Score=25.04 Aligned_cols=26 Identities=27% Similarity=0.534 Sum_probs=22.1
Q ss_pred ecCCCe---EEEEEeccCCHHHHHHHHhh
Q psy477 4 LSDKGI---LYLLVIKENDPEDIIHCLSQ 29 (60)
Q Consensus 4 Ls~~G~---~YLv~~~~N~p~ei~~~~~~ 29 (60)
.||=|| |||++.-+-++++|++.+++
T Consensus 75 ~sPMGCrTGFYlil~G~~~~~~v~~~~~~ 103 (160)
T 1j6x_A 75 WSPMGCQTGFYLTVLNHDNYTEILEVLEK 103 (160)
T ss_dssp EEECTTSSEEEEEEESCCCHHHHHHHHHH
T ss_pred ECCcCcchhcEEEEeCCCCHHHHHHHHHH
Confidence 467777 99999999999999988766
No 112
>1vje_A Autoinducer-2 production protein LUXS; structural genomics, hydrolase; 1.64A {Deinococcus radiodurans} SCOP: d.185.1.2 PDB: 1vgx_A 1inn_A 1j6v_A 1vh2_A
Probab=67.56 E-value=5.9 Score=25.14 Aligned_cols=26 Identities=27% Similarity=0.560 Sum_probs=22.1
Q ss_pred ecCCCe---EEEEEeccCCHHHHHHHHhh
Q psy477 4 LSDKGI---LYLLVIKENDPEDIIHCLSQ 29 (60)
Q Consensus 4 Ls~~G~---~YLv~~~~N~p~ei~~~~~~ 29 (60)
.||=|| |||++.-+-++++|++.+++
T Consensus 77 ~sPMGCrTGFYlil~G~~~~~~v~~~~~~ 105 (166)
T 1vje_A 77 VSPMGARTGMYMAVIGEPDEQGVMKAFEA 105 (166)
T ss_dssp EEECTTSSEEEEEEESSCCHHHHHHHHHH
T ss_pred ECCcccccccEEEEeCCCCHHHHHHHHHH
Confidence 467777 99999999999999988765
No 113
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=67.48 E-value=10 Score=25.27 Aligned_cols=50 Identities=32% Similarity=0.302 Sum_probs=33.3
Q ss_pred ceecCCCeEEEEEec------c----CC-----------HHHHHHHHhhCCceEEEEEEEee-----CCeEEEEEE
Q psy477 2 DSLSDKGILYLLVIK------E----ND-----------PEDIIHCLSQYGFMGKTLLTRQV-----PGEKLSVLK 51 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~------~----N~-----------p~ei~~~~~~~G~~~~vv~~rk~-----~~E~L~Vlr 51 (60)
++|+|+|.+.+++-. . .+ ++++.+.+.+.||...-+..-.+ .-|.|.-++
T Consensus 173 rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~ 248 (291)
T 3hp7_A 173 KILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLE 248 (291)
T ss_dssp HHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEE
T ss_pred HHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhh
Confidence 579999998887211 1 11 35677788889999876666555 457666554
No 114
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=67.13 E-value=13 Score=24.19 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=26.0
Q ss_pred ceecCCCeEEEEEe----cc----------------------CCHHHHHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVI----KE----------------------NDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~----~~----------------------N~p~ei~~~~~~~G~~~~vv~ 38 (60)
+.|+|+|.++++-. .. -.++++.+.+++.||....+.
T Consensus 275 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 275 RALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp HHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred HhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 46889999887654 11 156788888999999865443
No 115
>3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis}
Probab=66.42 E-value=23 Score=24.85 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=31.4
Q ss_pred CCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCC
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPG 44 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~ 44 (60)
=|+-+++++...+.+++++.+++.|-.+.++.+-..+.
T Consensus 337 mGiGmVlvV~~e~a~~vl~~l~~~G~~A~iIG~V~~~~ 374 (389)
T 3mdo_A 337 MGHRMEIYIAPEHAEEVIGISKSFGIDAQIVGFVEEAD 374 (389)
T ss_dssp TTEEEEEEECGGGHHHHHHHHHHTTCCEEEEEEEEECS
T ss_pred CcceEEEEECHHHHHHHHHHHHHcCCCeEEEEEEEeCC
Confidence 47778888888899999999999998888888765543
No 116
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=66.07 E-value=6.3 Score=25.89 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=24.7
Q ss_pred CCCeEEEEEe---------------------ccCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVI---------------------KENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~---------------------~~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|.++++-- +.+|.+.+.+.+++.||++.+.
T Consensus 16 ~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~ 68 (271)
T 3h11_B 16 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPH 68 (271)
T ss_dssp SCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCEEEEE
Confidence 6888888754 3356788889999999997753
No 117
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=65.95 E-value=7.4 Score=23.34 Aligned_cols=19 Identities=32% Similarity=0.438 Sum_probs=14.7
Q ss_pred CHHHHHHHHhhCCceEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv 37 (60)
.++++.+.+++.||....+
T Consensus 202 ~~~~l~~~l~~aGf~~~~~ 220 (243)
T 3d2l_A 202 PPEQYITWLREAGFRVCAV 220 (243)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEE
Confidence 5788888888888876544
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=65.46 E-value=26 Score=23.06 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=26.0
Q ss_pred ceecCCCeEEEEEeccC-----------------------CHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN-----------------------DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----------------------~p~ei~~~~~~~G~~~~vv 37 (60)
+.|.|+|.++++-.-.. .+++..+.+++.||...-+
T Consensus 295 ~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 295 TAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp TTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 46889999888653322 2677788888899986654
No 119
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=65.19 E-value=17 Score=23.73 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=26.0
Q ss_pred ceecCCCeEEEEEec-----------------------c----CCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIK-----------------------E----NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~-----------------------~----N~p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|.++++-.. + -.++++.+.+++.||....+
T Consensus 283 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~ 345 (359)
T 1x19_A 283 DAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTM 345 (359)
T ss_dssp TTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEE
T ss_pred HhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEE
Confidence 468899998776521 1 35778889999999985543
No 120
>1j6w_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.10A {Haemophilus influenzae} SCOP: d.185.1.2 PDB: 1joe_A
Probab=64.96 E-value=7 Score=24.96 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=22.0
Q ss_pred ecCCCe---EEEEEeccCCHHHHHHHHhh
Q psy477 4 LSDKGI---LYLLVIKENDPEDIIHCLSQ 29 (60)
Q Consensus 4 Ls~~G~---~YLv~~~~N~p~ei~~~~~~ 29 (60)
.||=|| |||++.-.-++++|++.+++
T Consensus 78 ~sPMGCrTGFYlil~G~~~~~~v~~~~~~ 106 (175)
T 1j6w_A 78 ISPMGCRTGFYMSLIGTPNEQKVSEAWLA 106 (175)
T ss_dssp EEECTTSSEEEEEEESCCCHHHHHHHHHH
T ss_pred eCCcCcccccEEEEeCCCCHHHHHHHHHH
Confidence 467777 99999999899999988765
No 121
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=64.89 E-value=2.5 Score=26.28 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=20.0
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCc
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGF 32 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~ 32 (60)
++|+|+|.+++......-.+.+.+.+...|+
T Consensus 161 ~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 161 YVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred HHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 5789999998865333223455566666664
No 122
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=64.68 E-value=8.1 Score=23.07 Aligned_cols=36 Identities=6% Similarity=-0.062 Sum_probs=23.6
Q ss_pred ceecCCCeEEEEEeccC--------------C----HHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEN--------------D----PEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------~----p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|.+++-..... . .+++.+.+.+.||...-+
T Consensus 128 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 128 AVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp HTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred HHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 47899999988542210 1 234666788899987643
No 123
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=63.93 E-value=5.3 Score=26.15 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=23.7
Q ss_pred ceecCCCeEEEEEeccC---CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN---DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|++++..++.+ +.+.|...+++.||+..
T Consensus 234 ~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 234 EVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELL 270 (315)
T ss_dssp HHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEE
T ss_pred HhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEe
Confidence 46899999988887753 23345566777887654
No 124
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=63.40 E-value=26 Score=22.23 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=30.4
Q ss_pred ceecCCCeEEEEEecc-----CCHHHHHHHHhh-CCceEEEEEE---Eee-CCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE-----NDPEDIIHCLSQ-YGFMGKTLLT---RQV-PGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~-----N~p~ei~~~~~~-~G~~~~vv~~---rk~-~~E~L~Vlr~ 52 (60)
+.|+|+|++|+..... ..+.+.++.+.+ .|+..+++.- |.. +...-+++-|
T Consensus 207 ~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~~~~d~ 267 (272)
T 3a27_A 207 EFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHVVVDA 267 (272)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred HHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEeEEEEEEEECCCCCEEEEEE
Confidence 4689999999766654 234566666665 4677665432 333 4445555444
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=63.03 E-value=9.6 Score=25.78 Aligned_cols=46 Identities=22% Similarity=0.205 Sum_probs=27.2
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r 54 (60)
+.|+|+|++|++.-+..+....++..-. .++++.+.+- ..|++...
T Consensus 322 ~~LkpgG~l~iv~n~~~~~~~~l~~~fg---~~~~~a~~~~----F~V~~~~~ 367 (375)
T 4dcm_A 322 RCLKINGELYIVANRHLDYFHKLKKIFG---NCTTIATNNK----FVVLKAVK 367 (375)
T ss_dssp HHEEEEEEEEEEEETTSCHHHHHHHHHS---CCEEEEECSS----EEEEEEEC
T ss_pred HhCCCCcEEEEEEECCcCHHHHHHHhcC---CEEEEeeCCC----EEEEEEcC
Confidence 4689999999988666655554443222 3555544332 35665543
No 126
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=62.65 E-value=25 Score=22.52 Aligned_cols=47 Identities=9% Similarity=0.223 Sum_probs=30.5
Q ss_pred ceecCCCeEEEEEecc---------------------CCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE---------------------NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~---------------------N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~ 52 (60)
+.|.|+|.++++-.-. -.++++.+.+++.||...-+ ...+. .+|+-+
T Consensus 262 ~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~--~~~~~--~~vie~ 329 (332)
T 3i53_A 262 EAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA--HPISY--VSIVEM 329 (332)
T ss_dssp HHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE--EECSS--SEEEEE
T ss_pred HhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE--EECCC--cEEEEE
Confidence 4688999988764321 23678888899999986543 33333 455544
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=62.43 E-value=11 Score=24.73 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=19.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHH
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCL 27 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~ 27 (60)
+.|+|+|.++++.-........++..
T Consensus 291 ~~LkpgG~l~i~~~~~~~~~~~l~~~ 316 (343)
T 2pjd_A 291 RHLNSGGELRIVANAFLPYPDVLDET 316 (343)
T ss_dssp GGEEEEEEEEEEEETTSSHHHHHHHH
T ss_pred HhCCCCcEEEEEEcCCCCcHHHHHHh
Confidence 57999999999887766655555443
No 128
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=62.20 E-value=5.6 Score=22.48 Aligned_cols=18 Identities=17% Similarity=0.091 Sum_probs=11.8
Q ss_pred ceecCCCeEEEEEeccCC
Q psy477 2 DSLSDKGILYLLVIKEND 19 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~ 19 (60)
++|+|+|++++.......
T Consensus 135 ~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 135 GLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp TCEEEEEEEEEEEETTSC
T ss_pred cccCCCcEEEEEeCCccC
Confidence 467788887766655444
No 129
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=62.04 E-value=16 Score=24.29 Aligned_cols=38 Identities=11% Similarity=0.041 Sum_probs=27.3
Q ss_pred ceecCCCeEEEEEec-------------------cCCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIK-------------------ENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~-------------------~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
++|+|+|++++..-. .-.++++.+.+++.||...-+..
T Consensus 196 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 196 ALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp HHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 468999998876432 12367899999999998655444
No 130
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=61.80 E-value=4.7 Score=27.11 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=29.5
Q ss_pred ceecCCCeEEEEEeccCC-HHH----HHHHHhhCCceEEEEEEEeeCCe
Q psy477 2 DSLSDKGILYLLVIKEND-PED----IIHCLSQYGFMGKTLLTRQVPGE 45 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~-p~e----i~~~~~~~G~~~~vv~~rk~~~E 45 (60)
+.|+|+|++|+...+.+- +++ +.+.+.+.|+..+++.....+..
T Consensus 327 ~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d 375 (396)
T 3c0k_A 327 QLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAAD 375 (396)
T ss_dssp HTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEEECCTT
T ss_pred HhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEECCCCCC
Confidence 468999999988776553 222 23456677988888876655443
No 131
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=61.78 E-value=2.3 Score=25.06 Aligned_cols=16 Identities=19% Similarity=0.248 Sum_probs=12.7
Q ss_pred HHHHHHHHhhCCceEE
Q psy477 20 PEDIIHCLSQYGFMGK 35 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~ 35 (60)
++++.+.+++.||..-
T Consensus 183 ~~~~~~~l~~aGf~~v 198 (219)
T 3dlc_A 183 VERFQNVLDEIGISSY 198 (219)
T ss_dssp HHHHHHHHHHHTCSSE
T ss_pred HHHHHHHHHHcCCCeE
Confidence 4788888999999743
No 132
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=61.48 E-value=5.1 Score=26.04 Aligned_cols=28 Identities=11% Similarity=0.253 Sum_probs=21.1
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhh
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQ 29 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~ 29 (60)
+.|+|+|++++.....+...+.++.+++
T Consensus 207 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 207 PHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp GGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 5799999998777666666667776664
No 133
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei}
Probab=61.19 E-value=18 Score=23.65 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=22.5
Q ss_pred CCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
|+|+++.++ ...+-+++.+.|++.|+.+.+
T Consensus 281 ~GG~v~al~-~~~~a~~~~~~l~~~g~~v~~ 310 (321)
T 4hac_A 281 GGGCMVALT-APEKCNQVAEAVAGAGGKVTI 310 (321)
T ss_dssp SSSEEEEEE-CSTTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEc-CHHHHHHHHHHHHhCCCeEEE
Confidence 355787776 666788999999998876443
No 134
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=59.73 E-value=8.8 Score=23.81 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=22.7
Q ss_pred ceecCCCeEEEEEeccCC----------------HH-----HHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIKEND----------------PE-----DIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~----------------p~-----ei~~~~~~~G~~~~vv 37 (60)
++|+|+|.++++.. .|+ |+ ++.+.+++.||...-+
T Consensus 127 r~LkpGG~l~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 127 DLAKKEAHFEFVTT-YSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp TTEEEEEEEEEEEC-CCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred HhcCCCcEEEEEEe-ccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 57999999988332 111 12 3777788889986543
No 135
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=59.70 E-value=10 Score=23.25 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=24.4
Q ss_pred cCCCeEEEEEec---------------------cCCHHHHHHHHhhCCceEEEE
Q psy477 5 SDKGILYLLVIK---------------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 5 s~~G~~YLv~~~---------------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
+|+|.++++--. .+|.+.+.+.+++.||.+++.
T Consensus 21 ~~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~ 74 (164)
T 1qtn_A 21 KPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPH 74 (164)
T ss_dssp SSCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCEEEEe
Confidence 368888887642 345677888889999998763
No 136
>3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=58.68 E-value=16 Score=25.77 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=30.6
Q ss_pred CCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeC
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVP 43 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~ 43 (60)
=|+-+++++...+.+++++.+++.|-.+.++.+-..+
T Consensus 339 mGiGmVlvV~~e~a~~vl~~L~~~G~~A~iIG~V~~~ 375 (394)
T 3kiz_A 339 MGHRLEIYTDAAHAEGMIAIAKKFNIEAKIIGRVEAP 375 (394)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHTTCCEEEEEEEESC
T ss_pred CcccEEEEECHHHHHHHHHHHHHcCCCeEEEEEEecC
Confidence 3777788888888999999999999888888876544
No 137
>3boe_A Cadmium-specific carbonic anhydrase; marine diatom, cadmium-bound, acetate LI lyase; 1.40A {Thalassiosira weissflogii} SCOP: c.154.1.1 PDB: 3boc_A 3bob_A 3boj_A 3boh_A
Probab=58.32 E-value=8.6 Score=25.01 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=22.3
Q ss_pred CHHHHHHHHhhCCceEEEEEEEeeCC
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTRQVPG 44 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~rk~~~ 44 (60)
.|.+|...++..||.++|+.......
T Consensus 3 tp~di~~aLq~RGW~AeIv~~~~~~~ 28 (210)
T 3boe_A 3 SPAQIAEALQGRGWDAEIVTDASMAG 28 (210)
T ss_dssp CHHHHHHHHHTTTCEEEEEESGGGTT
T ss_pred CHHHHHHHHHcCCCceEEechhhhhh
Confidence 49999999999999999988766643
No 138
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=56.79 E-value=9.9 Score=24.30 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=23.2
Q ss_pred eecCCCeEEEEEeccCC----------HHHHHHHHhhCCceEEEEE
Q psy477 3 SLSDKGILYLLVIKEND----------PEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~----------p~ei~~~~~~~G~~~~vv~ 38 (60)
.|+|+|.+.+.+ +.+. -+++.+.+++.||+..-..
T Consensus 170 ~LkpGG~lvisi-k~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 170 FLKVNGDMLLVI-KARSIDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp HEEEEEEEEEEE-C-------CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred hCCCCeEEEEEE-ccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 699999987763 2211 2566788888898865443
No 139
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=56.78 E-value=9 Score=26.37 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=24.7
Q ss_pred ceecCCCeEEEEEeccCC---HHHHHHHHhhC-CceEEE
Q psy477 2 DSLSDKGILYLLVIKEND---PEDIIHCLSQY-GFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~---p~ei~~~~~~~-G~~~~v 36 (60)
++|+|+|++.+..++.+. .+.|...++++ ||....
T Consensus 377 ~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 377 RLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp TTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECC
T ss_pred HhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEee
Confidence 468999999999888763 33455667776 777543
No 140
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=56.58 E-value=12 Score=25.24 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=24.8
Q ss_pred CCCeEEEEEec-------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK-------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~-------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|+++++--. .+|-+.+.+.+++.||++.+.
T Consensus 59 ~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~V~~~ 103 (310)
T 2nn3_C 59 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVF 103 (310)
T ss_dssp BCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 67888777543 566788889999999998764
No 141
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=56.47 E-value=17 Score=21.44 Aligned_cols=14 Identities=14% Similarity=0.247 Sum_probs=9.1
Q ss_pred ceecCCCeEEEEEe
Q psy477 2 DSLSDKGILYLLVI 15 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~ 15 (60)
+.|+|+|.+++...
T Consensus 130 ~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 130 RVLKPSGKFIMYFT 143 (227)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEec
Confidence 35777787766543
No 142
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=55.95 E-value=12 Score=18.37 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=18.0
Q ss_pred CCHHHHHHHHhhCCceEEEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~vv~ 38 (60)
.+++++.+.+++.||.++.+.
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 51 VKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CCHHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEcc
Confidence 378999999999999988654
No 143
>3qv0_A Mitochondrial acidic protein MAM33; A BOWL like structure, mitochondrial oxidative phosphorylati protein binding; 2.10A {Saccharomyces cerevisiae}
Probab=55.91 E-value=27 Score=22.82 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=26.0
Q ss_pred cCCHHHHHHHHhhCCceEE-------E-EEEEeeCCeEEEEE
Q psy477 17 ENDPEDIIHCLSQYGFMGK-------T-LLTRQVPGEKLSVL 50 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~~-------v-v~~rk~~~E~L~Vl 50 (60)
+..|..+.+.+.+.||+.. | +.+|..++|++.|.
T Consensus 32 e~~p~~~~~Fl~~~~f~i~d~~G~~~V~llkr~~g~EkI~V~ 73 (227)
T 3qv0_A 32 STSLDSFNDFLNKYKFSLVETPGKNEAEIVRRTESGETVHVF 73 (227)
T ss_dssp --CHHHHHHHHHHTTCEEECCTTCSEEEEEEECTTSCEEEEE
T ss_pred ccCchHHHHHHhcCCcEEEecCCCceEEEEEeecCCcEEEEE
Confidence 3457889999999999873 4 56777789999875
No 144
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=55.71 E-value=16 Score=22.65 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=23.9
Q ss_pred CCeEEEEEecc-----------CCHHHHHHHHhhCCceEEEE
Q psy477 7 KGILYLLVIKE-----------NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 7 ~G~~YLv~~~~-----------N~p~ei~~~~~~~G~~~~vv 37 (60)
+|.++++--.. +|-+.+.+.+++.||++.+.
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~ 84 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVK 84 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 68777776543 56788889999999998764
No 145
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=55.64 E-value=15 Score=24.22 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=24.6
Q ss_pred CCCeEEEEEec--------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK--------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~--------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|.++++--. .+|.+.+.+.+++.||++.+.
T Consensus 20 ~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~ 65 (278)
T 3od5_A 20 RRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCF 65 (278)
T ss_dssp BCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 67888877543 256788899999999997753
No 146
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=55.64 E-value=29 Score=20.38 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=26.9
Q ss_pred ceecCCCeEEEEEec---------cCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEe
Q psy477 2 DSLSDKGILYLLVIK---------ENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~---------~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r 54 (60)
++|+|+|.+++.... ..+.+.+...+.+.--..+.+..+....|.-+++...+
T Consensus 142 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~l~~~~ 203 (216)
T 3ofk_A 142 KMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQCQGQSADEDCLLARFR 203 (216)
T ss_dssp HTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEEEEECSSTTCEEEEEEEE
T ss_pred HHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEEeccCCccccchhHHHHh
Confidence 478999998875432 22345555555443223344444433344434443333
No 147
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=55.50 E-value=8 Score=25.36 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=26.0
Q ss_pred ceecCCCeEEEEEe----ccCCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVI----KENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~----~~N~p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|++.+++- ..+...++.+.+.+.|+...++
T Consensus 244 ~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii 283 (344)
T 2f8l_A 244 RYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGII 283 (344)
T ss_dssp HTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEE
T ss_pred HHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEee
Confidence 46889999988872 3344678888888888754444
No 148
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=55.49 E-value=11 Score=23.99 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=24.8
Q ss_pred ceecCCCeEEEEEeccC--------------------------CHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKEN--------------------------DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------------------~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|.++++-...+ .++++.+.+++.||....
T Consensus 259 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 259 TALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp HHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred HhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 46889998877644322 277888889999998544
No 149
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=55.33 E-value=23 Score=23.45 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=22.4
Q ss_pred ceecCCCeEEEEEeccC--CHHHHHHHHh----hCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN--DPEDIIHCLS----QYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~----~~G~~~~ 35 (60)
++|+|+|.+++..+... +++...+.++ +.|+.++
T Consensus 260 ~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 260 EILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 57899999877665443 3555544444 5788776
No 150
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=55.15 E-value=10 Score=20.48 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=15.0
Q ss_pred CHHHHHHHHhhCCceEE
Q psy477 19 DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~ 35 (60)
|++++++.+++.||.+.
T Consensus 62 d~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 62 PMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCEee
Confidence 68999999999999763
No 151
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=54.99 E-value=3.3 Score=25.68 Aligned_cols=24 Identities=4% Similarity=-0.047 Sum_probs=17.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHH
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIH 25 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~ 25 (60)
++|+|+|.++++.-..+...++..
T Consensus 166 ~~L~pgG~l~~~~~~~~~~~~~~~ 189 (269)
T 1p91_A 166 RVVKPGGWVITATPGPRHLMELKG 189 (269)
T ss_dssp HHEEEEEEEEEEEECTTTTHHHHT
T ss_pred HhcCCCcEEEEEEcCHHHHHHHHH
Confidence 478999999988776666555543
No 152
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=54.36 E-value=8.9 Score=25.20 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=23.8
Q ss_pred CCCeEEEEEec-------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK-------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~-------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|+++++--. .||-+.+.+.+++.||++.+.
T Consensus 31 ~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~V~~~ 75 (272)
T 1m72_A 31 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVF 75 (272)
T ss_dssp EEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 46777766543 566788889999999998764
No 153
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=53.74 E-value=19 Score=20.93 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=23.3
Q ss_pred ceecCCCeEEEEEeccC-----------------------------CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN-----------------------------DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----------------------------~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.+++.....+ .++++.+.+...||...
T Consensus 116 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 116 RVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp HHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred HHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 46889998887764321 36677888888786543
No 154
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=53.42 E-value=5.3 Score=25.88 Aligned_cols=33 Identities=24% Similarity=0.205 Sum_probs=23.6
Q ss_pred ceecCCCeEEEEEeccC------C-------HHHHHHHHhhCCceE
Q psy477 2 DSLSDKGILYLLVIKEN------D-------PEDIIHCLSQYGFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N------~-------p~ei~~~~~~~G~~~ 34 (60)
++|+|+|.+|+.+-..- + .+++...+++.||..
T Consensus 85 rvLk~~G~l~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 85 RLLVPGGRLVIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp HHEEEEEEEEEEECCEEEECC----EEEECHHHHHHHHHHHTTCEE
T ss_pred HHcCCCcEEEEEECCCccccccCCcccccccHHHHHHHHHHcCCee
Confidence 57899999999864210 1 257888888999864
No 155
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=52.98 E-value=7.1 Score=25.19 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=27.7
Q ss_pred ceecCCCeEEEEEeccCCH----------HHHHHHHhhCCceEEEEEE-EeeCCeEEEEE
Q psy477 2 DSLSDKGILYLLVIKENDP----------EDIIHCLSQYGFMGKTLLT-RQVPGEKLSVL 50 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p----------~ei~~~~~~~G~~~~vv~~-rk~~~E~L~Vl 50 (60)
+.|+|+|.+.+.. +...+ ++.++.|++.||+..-... ..+.+-|..|+
T Consensus 170 r~LKpGG~lvI~i-k~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~ 228 (233)
T 4df3_A 170 FFLRDGGYMLMAI-KARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIY 228 (233)
T ss_dssp HHEEEEEEEEEEE-ECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEE
T ss_pred HhccCCCEEEEEE-ecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEE
Confidence 4689999976653 33222 3456778889998643332 23333355443
No 156
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=52.81 E-value=15 Score=23.86 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=24.1
Q ss_pred CCCeEEEEEe-------------ccCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVI-------------KENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~-------------~~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|+++++-- +.||-+.+.+.+++.||++.+.
T Consensus 19 ~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~ 63 (259)
T 3sir_A 19 NRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVY 63 (259)
T ss_dssp EEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEE
T ss_pred CccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEE
Confidence 5677777643 3467889999999999998764
No 157
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=52.71 E-value=6.6 Score=25.59 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=24.0
Q ss_pred ceecCCCeEEEEEecc----CCHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKE----NDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~----N~p~ei~~~~~~~G~~~~ 35 (60)
+.|+|+|++.+...+. ...+++.+.+++.||...
T Consensus 198 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 198 RILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASV 235 (304)
T ss_dssp HHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcE
Confidence 4689999987764331 135778888888899743
No 158
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=52.45 E-value=37 Score=20.66 Aligned_cols=33 Identities=9% Similarity=-0.125 Sum_probs=26.1
Q ss_pred eecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 3 SLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
+|.+.|.++........++++.+.|++.||..-
T Consensus 201 ~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v 233 (254)
T 2h00_A 201 LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKV 233 (254)
T ss_dssp HGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEE
T ss_pred cccceEEEEECCCChhHHHHHHHHHHHcCCCce
Confidence 467788888777666667899999999999743
No 159
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=52.38 E-value=27 Score=22.93 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=24.3
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhC-CceE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQY-GFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~-G~~~ 34 (60)
+.|+|+|.+++..++.. .+...+.+++. ||+.
T Consensus 279 ~~L~~gG~l~~~~~~~~-~~~~~~~l~~~~~~~i 311 (336)
T 2yx1_A 279 DIVEEGGVIHYYTIGKD-FDKAIKLFEKKCDCEV 311 (336)
T ss_dssp HHEEEEEEEEEEEEESS-SHHHHHHHHHHSEEEE
T ss_pred HHcCCCCEEEEEEeecC-chHHHHHHHHhcCCcE
Confidence 46889999988877776 77777878776 5553
No 160
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=52.07 E-value=11 Score=17.60 Aligned_cols=19 Identities=11% Similarity=0.422 Sum_probs=15.6
Q ss_pred CCHHHHHHHHhhCCceEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~v 36 (60)
.+++++.+.+.+.||.++.
T Consensus 49 ~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 49 VQATEICQAINELGYQAEV 67 (68)
T ss_dssp CCHHHHHHHHHTTSSCEEE
T ss_pred CCHHHHHHHHHHcCCCccc
Confidence 3678899999999998764
No 161
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=51.97 E-value=46 Score=21.57 Aligned_cols=38 Identities=5% Similarity=0.114 Sum_probs=26.4
Q ss_pred ceecCCCeEEEEEecc------------------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIKE------------------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~------------------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+.|+|+|.++++-.-. -.++++.+.+++.||...-+..
T Consensus 274 ~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 274 RVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 4688999988754311 1367788888999998665443
No 162
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=51.84 E-value=27 Score=20.06 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=11.8
Q ss_pred ceecCCCeEEEEEec
Q psy477 2 DSLSDKGILYLLVIK 16 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~ 16 (60)
++|+|+|.++++.-.
T Consensus 123 ~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 123 DRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHEEEEEEEEEEEC-
T ss_pred HhcCCCcEEEEEEeC
Confidence 468999999988764
No 163
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=51.79 E-value=11 Score=25.02 Aligned_cols=31 Identities=13% Similarity=0.014 Sum_probs=26.2
Q ss_pred EEEEeccCCHHHHHHHHhhCCceEEEEEEEe
Q psy477 11 YLLVIKENDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
+|+++...+-+++.+.+++.|..+.+|.+--
T Consensus 307 LL~tv~~~~~~~~~~~l~~~g~~a~~IG~V~ 337 (345)
T 2zod_A 307 LLFTINKEKLEKIDETAKELEVNYWIIGETI 337 (345)
T ss_dssp EEEEECGGGGGTHHHHHHHHTCCCEEEEEEE
T ss_pred EEEEEcHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 6777788889999999999999999888644
No 164
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=51.55 E-value=7.1 Score=24.60 Aligned_cols=15 Identities=13% Similarity=0.160 Sum_probs=11.4
Q ss_pred ceecCCCeEEEEEec
Q psy477 2 DSLSDKGILYLLVIK 16 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~ 16 (60)
+.|+|+|.++++...
T Consensus 114 ~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 114 HSVKKGGKIICFEPH 128 (284)
T ss_dssp HTEEEEEEEEEEECC
T ss_pred HHcCCCCEEEEEecc
Confidence 468999998877544
No 165
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=51.14 E-value=9.6 Score=22.96 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=22.8
Q ss_pred CCCeEEEEEec--------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK--------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~--------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|.++++--. +.|.+.+.+.+++.||.+++.
T Consensus 15 ~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~ 60 (146)
T 2dko_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNK 60 (146)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 67887777432 224577888889999998764
No 166
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=51.04 E-value=7.4 Score=24.72 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=21.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceE
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~ 34 (60)
++|+|+|.+|+-. ..+....+...+.+.||..
T Consensus 62 ~~Lk~~g~i~v~~-~d~~~~~~~~~~~~~gf~~ 93 (260)
T 1g60_A 62 DKLDKDGSLYIFN-TPFNCAFICQYLVSKGMIF 93 (260)
T ss_dssp HHEEEEEEEEEEE-CHHHHHHHHHHHHHTTCEE
T ss_pred HHhcCCeEEEEEc-CcHHHHHHHHHHHhhccce
Confidence 4689999998875 2333445566777778753
No 167
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens}
Probab=49.90 E-value=22 Score=23.63 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=26.4
Q ss_pred EEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 11 YLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
+++++...+.+++.+.+++.|..+.+|.+-..
T Consensus 277 ll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~ 308 (334)
T 2v9y_A 277 AVLVVSKEQTEQILRGIQQHKEEAWVIGSVVA 308 (334)
T ss_dssp EEEEECGGGHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEECHHHHHHHHHHHHhcCCCeEEEEEEec
Confidence 77777777899999999999998888887433
No 168
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A
Probab=49.11 E-value=22 Score=22.73 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=19.9
Q ss_pred CCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
+|+++.++-.+ +.+++.+.+++.|+.+-
T Consensus 284 GG~v~~l~~~~-~~~~~~~~l~~~g~~~~ 311 (317)
T 1kkh_A 284 GGCVIILVNEE-KEKELLKELNKEDVRIF 311 (317)
T ss_dssp SEEEEEECCGG-GHHHHHHHHHTSSCEEE
T ss_pred CCEEEEEechh-hHHHHHHHHHhcCCEEE
Confidence 44776666444 48889999999887643
No 169
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=48.39 E-value=5.8 Score=26.59 Aligned_cols=37 Identities=24% Similarity=0.170 Sum_probs=25.0
Q ss_pred ceecCCCeEEEEEeccCC-HHH----HHHHHhhCCceEEEEE
Q psy477 2 DSLSDKGILYLLVIKEND-PED----IIHCLSQYGFMGKTLL 38 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~-p~e----i~~~~~~~G~~~~vv~ 38 (60)
+.|+|+|.+++..++.+- +++ +.+.+.+.|...+++.
T Consensus 323 ~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 323 NLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp TTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred HhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 578999998888776543 332 3345556788887765
No 170
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=48.39 E-value=21 Score=22.36 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=24.6
Q ss_pred cCCCeEEEEEecc--------------CCHHHHHHHHhhCCceEEEE
Q psy477 5 SDKGILYLLVIKE--------------NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 5 s~~G~~YLv~~~~--------------N~p~ei~~~~~~~G~~~~vv 37 (60)
.|+|.++++--.. .|.+.+.+.+++.||++++.
T Consensus 42 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~ 88 (179)
T 3p45_A 42 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCF 88 (179)
T ss_dssp SBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3678887775432 36778889999999998764
No 171
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=48.10 E-value=27 Score=23.65 Aligned_cols=47 Identities=17% Similarity=0.083 Sum_probs=26.7
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~ 56 (60)
++|+|+|.++++.-.....+..++..-. .++++ +..+| .|++..+..
T Consensus 328 ~~LkpGG~l~iv~n~~l~~~~~l~~~f~---~v~~l--~~~gF---~Vl~a~~~~ 374 (381)
T 3dmg_A 328 ARLRPGGVFFLVSNPFLKYEPLLEEKFG---AFQTL--KVAEY---KVLFAEKRG 374 (381)
T ss_dssp HHEEEEEEEEEEECTTSCHHHHHHHHHS---CCEEE--EESSS---EEEEEECC-
T ss_pred HhcCcCcEEEEEEcCCCChHHHHHHhhc---cEEEE--eCCCE---EEEEEEEec
Confidence 4689999999987665555444433211 34544 44444 455555543
No 172
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=47.98 E-value=11 Score=24.85 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=24.3
Q ss_pred ceecCCCeEEEEEecc----CCHHHHHHHHhhCCc
Q psy477 2 DSLSDKGILYLLVIKE----NDPEDIIHCLSQYGF 32 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~----N~p~ei~~~~~~~G~ 32 (60)
++|+|+|.+.+++-.. ...+++.+.+.+.|+
T Consensus 152 ~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 152 RLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp HHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred HHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 5789999999988663 246778888888888
No 173
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=47.81 E-value=24 Score=22.91 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=24.1
Q ss_pred cCCCeEEEEEec--------------cCCHHHHHHHHhhCCceEEEE
Q psy477 5 SDKGILYLLVIK--------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 5 s~~G~~YLv~~~--------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
+|+|+++++--. .+|-+.+.+.+++.||++.+.
T Consensus 19 ~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~ 65 (277)
T 1nw9_B 19 EPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVK 65 (277)
T ss_dssp SSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEE
Confidence 378888777443 236778889999999998763
No 174
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=47.79 E-value=16 Score=21.03 Aligned_cols=33 Identities=3% Similarity=0.027 Sum_probs=22.7
Q ss_pred ceecCCCeEEEEEecc-------------CCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIKE-------------NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~-------------N~p~ei~~~~~~~G~~~~v 36 (60)
++|+|+|.++++..-. -.++++.+.+.+ |+...
T Consensus 124 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~ 169 (199)
T 2xvm_A 124 RCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVK 169 (199)
T ss_dssp HTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred HhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEE
Confidence 4689999987765321 157888888876 76543
No 175
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=47.32 E-value=24 Score=23.16 Aligned_cols=40 Identities=20% Similarity=0.274 Sum_probs=24.8
Q ss_pred ceecCCCeEEE--EEeccC---CH-HHHHHHHhhCCceEEEEEEEe
Q psy477 2 DSLSDKGILYL--LVIKEN---DP-EDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 2 ~~Ls~~G~~YL--v~~~~N---~p-~ei~~~~~~~G~~~~vv~~rk 41 (60)
++|+++|++.+ .+-+.. ++ +.+.+..++.|+.++++..++
T Consensus 213 ~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~~~ 258 (278)
T 3k6r_A 213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELK 258 (278)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEEEE
Confidence 46889998643 333322 23 334455677899998877654
No 176
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=46.83 E-value=25 Score=21.53 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=23.8
Q ss_pred cCCCeEEEEEecc--------------CCHHHHHHHHhhCCceEEEE
Q psy477 5 SDKGILYLLVIKE--------------NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 5 s~~G~~YLv~~~~--------------N~p~ei~~~~~~~G~~~~vv 37 (60)
+|+|.++++--.. .|.+.+.+.+++.||.+++.
T Consensus 31 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~ 77 (167)
T 1pyo_A 31 RPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVL 77 (167)
T ss_dssp SSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEe
Confidence 3688887775431 15677888899999998763
No 177
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=46.50 E-value=16 Score=24.09 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=23.0
Q ss_pred ceecCCCeEEEEEecc--CC--------HHHHHHHHhhCCceE
Q psy477 2 DSLSDKGILYLLVIKE--ND--------PEDIIHCLSQYGFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~--N~--------p~ei~~~~~~~G~~~ 34 (60)
++|+|+|.+|+..... .+ ...+++.++..||..
T Consensus 72 rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 72 KKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp HHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEE
T ss_pred HHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEE
Confidence 5799999999887643 11 245666678889874
No 178
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=46.48 E-value=33 Score=21.73 Aligned_cols=12 Identities=33% Similarity=0.418 Sum_probs=9.2
Q ss_pred ceecCCCeEEEE
Q psy477 2 DSLSDKGILYLL 13 (60)
Q Consensus 2 ~~Ls~~G~~YLv 13 (60)
+.|.|+|++.+.
T Consensus 166 ~~LkpGG~lii~ 177 (261)
T 4gek_A 166 QGLNPGGALVLS 177 (261)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHcCCCcEEEEE
Confidence 468999987664
No 179
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=45.74 E-value=19 Score=21.71 Aligned_cols=13 Identities=23% Similarity=0.028 Sum_probs=10.4
Q ss_pred ceecCCCeEEEEE
Q psy477 2 DSLSDKGILYLLV 14 (60)
Q Consensus 2 ~~Ls~~G~~YLv~ 14 (60)
++|+|+|.+++..
T Consensus 129 ~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 129 RVLKPGGALLEGW 141 (263)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHCCCCcEEEEEe
Confidence 4688999988873
No 180
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=45.51 E-value=13 Score=21.82 Aligned_cols=39 Identities=8% Similarity=-0.096 Sum_probs=28.2
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLS 48 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~ 48 (60)
|.+|++.. .+..+.+.+.+.+.| .++++.....+.++.+
T Consensus 140 g~~~~~~~-~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 178 (200)
T 1ne2_A 140 MWIYSIGN-AKARDFLRREFSARG-DVFREEKVYITVPRIY 178 (200)
T ss_dssp EEEEEEEE-GGGHHHHHHHHHHHE-EEEEEEEEEEECCSCC
T ss_pred CcEEEEEc-CchHHHHHHHHHHCC-CEEEEEEEecCCCccc
Confidence 66666654 445778888888889 9998888777655543
No 181
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=45.50 E-value=23 Score=23.27 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=22.2
Q ss_pred CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCC
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCD 57 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~ 57 (60)
.++++.+.+++.||....+ ....+-...|+.+.++++
T Consensus 321 t~~e~~~ll~~AGf~~v~~--~~~~g~~~svi~~~~~~~ 357 (363)
T 3dp7_A 321 HSDDLIRCIENAGLEVEEI--QDNIGLGHSILQCRLKEG 357 (363)
T ss_dssp CHHHHHHHHHTTTEEESCC--CCCBTTTBEEEEEEEC--
T ss_pred CHHHHHHHHHHcCCeEEEE--EeCCCCCceEEEEeeccc
Confidence 3677788888889886533 222233357777777654
No 182
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=45.43 E-value=47 Score=21.12 Aligned_cols=36 Identities=14% Similarity=0.382 Sum_probs=24.9
Q ss_pred ceecCCCeEEEEEec------------------------cCCHHHHHHHHhhCCceEEEE
Q psy477 2 DSLSDKGILYLLVIK------------------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~------------------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
+.|+|+|.+++.-.- +-.++++.+.+++.||...-+
T Consensus 260 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 260 EAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp HHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred HhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 468899998877321 113677788888999985543
No 183
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=45.32 E-value=14 Score=21.49 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=26.8
Q ss_pred ceecCCCeEEEEEeccC-----CHHHHHHHHhh---CCceEEEEEE--EeeCCeEEEEEEEE
Q psy477 2 DSLSDKGILYLLVIKEN-----DPEDIIHCLSQ---YGFMGKTLLT--RQVPGEKLSVLKFT 53 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-----~p~ei~~~~~~---~G~~~~vv~~--rk~~~E~L~Vlr~~ 53 (60)
++|+|+|.++++..... ..+.+.+.+.. .+|.+....- +.-..-.++|++-.
T Consensus 127 ~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~~~~~~~~ 188 (197)
T 3eey_A 127 ELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKI 188 (197)
T ss_dssp HHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCEEEEEEEC
T ss_pred HhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCeEEEEEEc
Confidence 46899999988864321 13344444433 4666554322 11123345555543
No 184
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=44.92 E-value=17 Score=24.33 Aligned_cols=38 Identities=16% Similarity=0.066 Sum_probs=28.8
Q ss_pred EEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEE
Q psy477 11 YLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSV 49 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~V 49 (60)
+|+++...+-+++++.+++.|..+.+|.+-.. ...++|
T Consensus 307 ll~~v~~~~~~~~~~~l~~~g~~a~vIG~v~~-~~~~~~ 344 (345)
T 2yyd_A 307 LLFTINKEKLEKIDETAKELEVNYWIIGETIA-ENVLEV 344 (345)
T ss_dssp EEEEECGGGGGTHHHHHHHHTCCCEEEEEEES-SSSEEE
T ss_pred EEEEEcHHHHHHHHHHHHHcCCCEEEEEEEee-CCceee
Confidence 56666777789999999999999888887543 445554
No 185
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=44.76 E-value=35 Score=18.18 Aligned_cols=33 Identities=9% Similarity=-0.012 Sum_probs=21.9
Q ss_pred ecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 4 Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
|.++.++-+++-...-.+.|-+.+++.|+....
T Consensus 34 l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~ 66 (82)
T 3lvj_C 34 MQPGETLLIIADDPATTRDIPGFCTFMEHELVA 66 (82)
T ss_dssp SCTTCEEEEEECCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 455666555553333356788888999998764
No 186
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=44.53 E-value=29 Score=17.12 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=16.8
Q ss_pred CHHHHHHHHhhCCceEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv 37 (60)
+++++.+.+++.||.+...
T Consensus 50 ~~~~i~~~i~~~Gy~~~~~ 68 (73)
T 3fry_A 50 DVDKYIKAVEAAGYQAKLR 68 (73)
T ss_dssp GHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHHcCCceEec
Confidence 8999999999999998753
No 187
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=44.46 E-value=42 Score=21.22 Aligned_cols=46 Identities=11% Similarity=0.115 Sum_probs=31.2
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLKFT 53 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr~~ 53 (60)
+...++....+.+.++.+.|.+.|+. ..++.-++++.++=.|++.+
T Consensus 161 ~~t~vl~~~~~~~~~i~~~L~~~g~~~~~~v~v~~~l~~~~E~i~~~t 208 (253)
T 4e16_A 161 QTSMVIFLSVQEIEKVVSKLLEGGYPKDTPIAVIYKATWADEKIVKGT 208 (253)
T ss_dssp CSEEEEEECSTTHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEEE
T ss_pred CCeEEEECcHHHHHHHHHHHHhcCCCCCCeEEEEEeCCCCCcEEEEEE
Confidence 33344445667899999999998884 55777777776554555543
No 188
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=43.83 E-value=26 Score=16.46 Aligned_cols=21 Identities=14% Similarity=0.514 Sum_probs=17.0
Q ss_pred ccCCHHHHHHHHhhCCceEEE
Q psy477 16 KENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 16 ~~N~p~ei~~~~~~~G~~~~v 36 (60)
...+++++.+.+++.||.+..
T Consensus 44 ~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 44 GTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp SCCCHHHHHHHHHTTTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCCcEe
Confidence 445689999999999998764
No 189
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=43.14 E-value=64 Score=20.72 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=25.8
Q ss_pred ceecCCCeEEEEEec---c----------------------CCHHHHHHHHhhCCceEEEEEE
Q psy477 2 DSLSDKGILYLLVIK---E----------------------NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~---~----------------------N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+.|+|+|.++++-.- . -.++++.+.+++.||....+..
T Consensus 276 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 276 EALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp HTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 468899988876432 1 1356778888899998654433
No 190
>3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A
Probab=42.96 E-value=28 Score=23.36 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=26.3
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
|.-+++++...+-+++++.+++.|..+.+|.+
T Consensus 304 g~gll~~v~~~~~~~~~~~l~~~g~~a~vIG~ 335 (349)
T 3p4e_A 304 GVGLIIALPKDQANAAVALLQAEGETAWVIGE 335 (349)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcEEEEEcHHHHHHHHHHHHhcCCCeEEEEE
Confidence 44477777777899999999999998888876
No 191
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=42.75 E-value=44 Score=18.90 Aligned_cols=20 Identities=15% Similarity=0.383 Sum_probs=9.5
Q ss_pred CHHHHHHHHhhCCceEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~ 38 (60)
...|++..|.+.|+.+.++.
T Consensus 31 ~v~ev~~am~~~g~~gkii~ 50 (85)
T 2l48_A 31 ETPDVMGALTSLKMTADFIL 50 (85)
T ss_dssp THHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCceEEEEE
Confidence 34444444444555555443
No 192
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=42.44 E-value=28 Score=22.07 Aligned_cols=37 Identities=8% Similarity=0.088 Sum_probs=22.8
Q ss_pred CCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCe
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGE 45 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E 45 (60)
+|++.-++-.+...+.|.+.+++.|++. +-+.|++.|
T Consensus 296 Ggc~ial~~~~~~~~~i~~~~~~~Gi~~--~y~~~~g~~ 332 (335)
T 3gon_A 296 GDCGIALSFDAQSTKTLKNRWADLGIEL--LYQERIGHD 332 (335)
T ss_dssp SSEEEEEECSHHHHHHHHHHHHHTTCEE--EEEEEC---
T ss_pred hheEEEEECCHHHHHHHHHHHHHCCCcE--EeehhhcCC
Confidence 4666666545556788899999999653 445555543
No 193
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=41.87 E-value=25 Score=23.53 Aligned_cols=32 Identities=22% Similarity=0.503 Sum_probs=24.2
Q ss_pred CCCeEEEEEecc------------CCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIKE------------NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~~------------N~p~ei~~~~~~~G~~~~vv 37 (60)
++|+++++--.. +|-+.+.+.+++.||++.+.
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~LGF~V~~~ 103 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFTIFPY 103 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEc
Confidence 678887775442 66788899999999998753
No 194
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=41.62 E-value=32 Score=16.78 Aligned_cols=21 Identities=10% Similarity=-0.061 Sum_probs=17.5
Q ss_pred cCCHHHHHHHHhhCCceEEEE
Q psy477 17 ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~~vv 37 (60)
..+++++.+.+++.||.+..+
T Consensus 50 ~~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 50 TLPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp SSCHHHHHHHHHTTSSCEEEE
T ss_pred eCCHHHHHHHHHHhCCCceee
Confidence 457999999999999987653
No 195
>3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A*
Probab=41.27 E-value=52 Score=22.45 Aligned_cols=40 Identities=5% Similarity=0.076 Sum_probs=29.5
Q ss_pred EEEEeccCCHHHHHHHHhhC----CceEEEEEEEeeCCeEEEEE
Q psy477 11 YLLVIKENDPEDIIHCLSQY----GFMGKTLLTRQVPGEKLSVL 50 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~----G~~~~vv~~rk~~~E~L~Vl 50 (60)
+|+++...+-+++++.+++. |..+.+|.+-..+...+.++
T Consensus 326 LL~~v~~~~~~~~~~~l~~~~~~~g~~a~~IG~V~~~~~~~~l~ 369 (394)
T 3fd5_A 326 LLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARII 369 (394)
T ss_dssp EEEEECHHHHHHHHHHHHCC---CCCCCEEEEEEEESSSCEEEE
T ss_pred EEEEECHHHHHHHHHHHHhccccCCCCEEEEEEEEeCCceEEEE
Confidence 56666666788999999998 88888888865554444443
No 196
>3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A*
Probab=41.22 E-value=47 Score=22.22 Aligned_cols=33 Identities=0% Similarity=-0.169 Sum_probs=27.0
Q ss_pred EEEEEeccCCHHHHHHHHhhCCc-eEEEEEEEee
Q psy477 10 LYLLVIKENDPEDIIHCLSQYGF-MGKTLLTRQV 42 (60)
Q Consensus 10 ~YLv~~~~N~p~ei~~~~~~~G~-~~~vv~~rk~ 42 (60)
-+++++...+-+++++.+++.|. .+.+|.+-..
T Consensus 310 gll~~v~~~~~~~~~~~l~~~g~~~a~~IG~V~~ 343 (350)
T 3m84_A 310 GMTIIASQDQFDKMQELAKKHTNTKLYQIGKITN 343 (350)
T ss_dssp EEEEEECGGGHHHHHHHHTTCTTSCEEEEEEEES
T ss_pred CEEEEECHHHHHHHHHHHHhcCCCCeEEEEEEEe
Confidence 37777777789999999999999 8888887543
No 197
>4b93_A Vesicle-associated membrane protein 7; endocytosis, exocytosis, snare; 2.00A {Mus musculus} PDB: 2dmw_A
Probab=41.05 E-value=19 Score=22.32 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=18.2
Q ss_pred ceecCCCeEEEEEeccCCHHHH
Q psy477 2 DSLSDKGILYLLVIKENDPEDI 23 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei 23 (60)
.+|..+|++|++++...-|..+
T Consensus 54 Hyl~~~gl~yl~i~d~~yp~r~ 75 (189)
T 4b93_A 54 HYICQDRIVYLCITDDDFERSR 75 (189)
T ss_dssp EEEEETTEEEEEEEETTSCHHH
T ss_pred EEEEeCCeEEEEEEcCccCHHH
Confidence 3678899999999999887655
No 198
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=40.65 E-value=28 Score=22.38 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=22.9
Q ss_pred CCCeEEEEEec--------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK--------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~--------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|+|+++++--. .+|-+.+.+.+++.||++.+.
T Consensus 15 ~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~ 60 (250)
T 2j32_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNK 60 (250)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56777766532 236778889999999997753
No 199
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=40.57 E-value=70 Score=20.45 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=24.8
Q ss_pred ceecCCCeEEEEEec--------------------------cCCHHHHHHHHhhCCceEEE
Q psy477 2 DSLSDKGILYLLVIK--------------------------ENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~--------------------------~N~p~ei~~~~~~~G~~~~v 36 (60)
+.|+|+|.++++-.- .-.++++.+.+++.||....
T Consensus 275 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 275 GLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp HTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 468899998876421 11267788888999998654
No 200
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=40.16 E-value=20 Score=16.92 Aligned_cols=17 Identities=18% Similarity=0.301 Sum_probs=14.1
Q ss_pred CCHHHHHHHHhhCCceE
Q psy477 18 NDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~ 34 (60)
.+++++.+.+.+.||.+
T Consensus 54 ~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 54 VTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHcCCCC
Confidence 35788999999999975
No 201
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus}
Probab=38.92 E-value=56 Score=21.06 Aligned_cols=32 Identities=9% Similarity=-0.076 Sum_probs=26.2
Q ss_pred EEEEEeccCCHHHHHHHHhhCCceEEEEEEEe
Q psy477 10 LYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 10 ~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
-+++++...+.+++.+.+++.|..+.+|.+-.
T Consensus 260 ~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~v~ 291 (311)
T 2yxz_A 260 EAVLVVPQEGAAAVEARAKAKGLPLFRAGRVV 291 (311)
T ss_dssp EEEEEECSTTHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEECHHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 46677777789999999999999888888743
No 202
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=38.82 E-value=61 Score=19.23 Aligned_cols=15 Identities=20% Similarity=0.051 Sum_probs=11.7
Q ss_pred ceecCCCeEEEEEec
Q psy477 2 DSLSDKGILYLLVIK 16 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~ 16 (60)
+.|+|+|.+++....
T Consensus 166 ~~LkpgG~l~~~~~~ 180 (227)
T 1g8a_A 166 VYLKRGGYGMIAVKS 180 (227)
T ss_dssp HHEEEEEEEEEEEEG
T ss_pred HhcCCCCEEEEEEec
Confidence 468999999888443
No 203
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=38.82 E-value=22 Score=24.26 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=27.7
Q ss_pred ceecCCCeEEEEEeccCC-HHH----HHHHHhhCCceEEEEEEEeeC
Q psy477 2 DSLSDKGILYLLVIKEND-PED----IIHCLSQYGFMGKTLLTRQVP 43 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~-p~e----i~~~~~~~G~~~~vv~~rk~~ 43 (60)
++|+|+|.+++..++.+- .++ +.+.+.+.|...+++.....+
T Consensus 314 ~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~~~~~ 360 (393)
T 4dmg_A 314 RLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRVTYQP 360 (393)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEEEECC
T ss_pred HhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEEcCCC
Confidence 578999998877776653 333 234445568888887665554
No 204
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=38.39 E-value=3.6 Score=25.18 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=20.5
Q ss_pred ceecCCCeEEEEEeccC--------------CHHHHHHHHhhCCce
Q psy477 2 DSLSDKGILYLLVIKEN--------------DPEDIIHCLSQYGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--------------~p~ei~~~~~~~G~~ 33 (60)
++|+|+|+++++-.... -++.....+.+.||.
T Consensus 158 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 203 (236)
T 1zx0_A 158 RLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFR 203 (236)
T ss_dssp HHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCC
T ss_pred HhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCC
Confidence 57999999765532210 014556778888997
No 205
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=38.00 E-value=64 Score=19.21 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=32.5
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhC-CceEEEEEEEe---eCCeEEEEEEEEeCCCCc
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQY-GFMGKTLLTRQ---VPGEKLSVLKFTRSCDEK 59 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~-G~~~~vv~~rk---~~~E~L~Vlr~~r~~~~~ 59 (60)
++|+|+|++.+--+...+..+..+.+++. +|....+-..- ....-+.+.++....++|
T Consensus 158 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~g~~~~~ 219 (221)
T 3u81_A 158 GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQGPSSPD 219 (221)
T ss_dssp TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEECCCCCCC
T ss_pred cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEeCCCCCC
Confidence 57999998766444444456677777665 56666543210 013445555554433444
No 206
>4afi_A AP-3 complex subunit delta-1, vesicle-associated protein 7; endocytosis, exocytosis, clathrin adaptor, chimera, fusion P; 2.80A {Homo sapiens}
Probab=38.00 E-value=22 Score=21.99 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=18.5
Q ss_pred ceecCCCeEEEEEeccCCHHHH
Q psy477 2 DSLSDKGILYLLVIKENDPEDI 23 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei 23 (60)
.+|..+|++||+++.++-|..+
T Consensus 106 Hyl~~dgl~yl~i~D~~~~rr~ 127 (173)
T 4afi_A 106 HYICQDRIVYLCITDDDFERSR 127 (173)
T ss_dssp EEEEETTEEEEEEEETTSCHHH
T ss_pred EEEEECCEEEEEEECCccChhH
Confidence 3678899999999999887665
No 207
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=37.88 E-value=54 Score=18.32 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=22.6
Q ss_pred eecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 3 SLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
-|.++.++-+++-...-.+.|-+.+++.|+.+..
T Consensus 50 ~l~~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~ 83 (97)
T 1je3_A 50 QLKKGEILEVVSDCPQSINNIPLDARNHGYTVLD 83 (97)
T ss_dssp TCCSSCEEEEEEBCSSSSCHHHHHHHHHTCSEEE
T ss_pred cCCCCCEEEEEECCcchHHHHHHHHHHCCCEEEE
Confidence 3556666655554333357788888899998764
No 208
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=37.54 E-value=32 Score=19.04 Aligned_cols=30 Identities=20% Similarity=0.080 Sum_probs=20.4
Q ss_pred CeEEEEEec--cCCHHHHHHHHhhCCceEEEE
Q psy477 8 GILYLLVIK--ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 8 G~~YLv~~~--~N~p~ei~~~~~~~G~~~~vv 37 (60)
|.+.+-+.- ..+.++.++.|+++|..++++
T Consensus 64 G~L~v~l~G~~~~~~~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 64 GFLVLHIPYISSVDFGKFEKELIERQVKMEVL 95 (98)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 555444432 233667788899999999887
No 209
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=37.19 E-value=36 Score=22.65 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=23.1
Q ss_pred CCeEEEEEec-----------cCCHHHHHHHHhhCCceEEEE
Q psy477 7 KGILYLLVIK-----------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 7 ~G~~YLv~~~-----------~N~p~ei~~~~~~~G~~~~vv 37 (60)
+|.++++--. .||-+.+.+.+++.||++.+.
T Consensus 60 ~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~V~~~ 101 (302)
T 3e4c_A 60 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVK 101 (302)
T ss_dssp CCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEe
Confidence 4666666554 457888899999999998753
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=37.01 E-value=12 Score=23.30 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=21.9
Q ss_pred eecCCCeEEEEE----eccCCHHHHHHHHhhC--CceEE
Q psy477 3 SLSDKGILYLLV----IKENDPEDIIHCLSQY--GFMGK 35 (60)
Q Consensus 3 ~Ls~~G~~YLv~----~~~N~p~ei~~~~~~~--G~~~~ 35 (60)
.|+|+|++.+.- ....+++.+.+.+++. +|...
T Consensus 176 ~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 176 LLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp TCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred hCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 799999876531 1234567788888776 57654
No 211
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=36.61 E-value=39 Score=22.13 Aligned_cols=32 Identities=6% Similarity=-0.086 Sum_probs=25.7
Q ss_pred EEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 11 YLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
+|+++...+.+++.+.+++.|..+.+|.+-..
T Consensus 263 ll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~ 294 (319)
T 3mcq_A 263 LCFTASTQHRQQIADIGRQLSLDMAVIGRITD 294 (319)
T ss_dssp EEEEEEGGGHHHHHHHHHHTTCCCEEEEEEES
T ss_pred EEEEEcHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 56666667799999999999999888887544
No 212
>3bw6_A Synaptobrevin homolog YKT6; YKT6P, farnesylation, vacuole fusion, snare, coiled coil, lipoprotein, membrane, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 1h8m_A 1iou_A
Probab=36.52 E-value=32 Score=20.33 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=17.7
Q ss_pred ee-cCCCeEEEEEeccCCHHHHH
Q psy477 3 SL-SDKGILYLLVIKENDPEDII 24 (60)
Q Consensus 3 ~L-s~~G~~YLv~~~~N~p~ei~ 24 (60)
++ ..+|++||+++...=|..+.
T Consensus 72 ~~~~~~gl~~l~i~D~~yp~rvA 94 (144)
T 3bw6_A 72 VYARSEGICGVLITDKEYPVRPA 94 (144)
T ss_dssp EEECTTSEEEEEEEETTSCHHHH
T ss_pred EEEecCCEEEEEEECCCCChhHH
Confidence 45 68999999999988876653
No 213
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=36.12 E-value=50 Score=18.75 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=18.2
Q ss_pred EEeccCCHHHHHHHHhhCCceE
Q psy477 13 LVIKENDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 13 v~~~~N~p~ei~~~~~~~G~~~ 34 (60)
+++...|++...+.+++.||++
T Consensus 114 ~~i~~~d~~~A~~~L~~~g~~v 135 (144)
T 2f06_A 114 VVIRPSNMDKCIEVLKEKKVDL 135 (144)
T ss_dssp EEEEESCHHHHHHHHHHTTCEE
T ss_pred EEEEeCCHHHHHHHHHHcCCEE
Confidence 3346679999999999999976
No 214
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=35.53 E-value=55 Score=17.76 Aligned_cols=31 Identities=13% Similarity=0.288 Sum_probs=20.2
Q ss_pred CCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
+++++-+++-...-.+.|-+.+++.|+.+..
T Consensus 28 ~G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~ 58 (87)
T 3hz7_A 28 AGGVVTVLVDNDISRQNLQKMAEGMGYQSEY 58 (87)
T ss_dssp GCCEEEEEESSHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 5666655553333356777888889998754
No 215
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=35.06 E-value=86 Score=21.73 Aligned_cols=53 Identities=17% Similarity=0.044 Sum_probs=37.3
Q ss_pred ceecCCCeEEEEEeccC--CHHHHHHHHhhCCceEEEEE----EEeeCCeEEEEEEEEeCC
Q psy477 2 DSLSDKGILYLLVIKEN--DPEDIIHCLSQYGFMGKTLL----TRQVPGEKLSVLKFTRSC 56 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~~~G~~~~vv~----~rk~~~E~L~Vlr~~r~~ 56 (60)
++|.|+|.|.+-+-.-- .-++++..+++ -|...-+. +|. .-|...|.+..+..
T Consensus 242 ~vLkPGGtfV~KvyggaDr~se~lv~~LaR-~F~~Vr~vKP~ASR~-StEvf~La~gf~g~ 300 (320)
T 2hwk_A 242 LHLNPGGTCVSIGYGYADRASESIIGAIAR-QFKFSRVCKPKSSLE-ETEVLFVFIGYDRK 300 (320)
T ss_dssp GGEEEEEEEEEEECCCCSHHHHHHHHHHHT-TEEEEEEECCTTCCS-TTCEEEEEEEECCC
T ss_pred HhcCCCceEEEEEecCCcccHHHHHHHHHH-hcceeeeeCCCCccc-cceEEEEEEeecCC
Confidence 67999999988887766 36777777766 45533333 466 78888888777653
No 216
>2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis}
Probab=35.04 E-value=96 Score=20.39 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=27.8
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
|.-+++++...+.+++.+.+++.|..+.+|.+-..
T Consensus 300 g~gll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~ 334 (346)
T 2btu_A 300 GIGMVVAVKEEDAKDIVRLLEEQGETARIIGRTVQ 334 (346)
T ss_dssp TEEEEEEECTTTHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred cCcEEEEEcHHHHHHHHHHHHhCCCCeEEEEEEec
Confidence 44477777888899999999999988888887443
No 217
>3kyq_A YKT6, synaptobrevin homolog YKT6; V-snare homolog, lipid binding, cytoplasmic vesicle, ER-GOLG transport, golgi apparatus, lipoprotein; HET: DPV; 2.44A {Rattus norvegicus}
Probab=34.95 E-value=33 Score=21.56 Aligned_cols=21 Identities=5% Similarity=0.224 Sum_probs=17.9
Q ss_pred eecCCCeEEEEEeccCCHHHH
Q psy477 3 SLSDKGILYLLVIKENDPEDI 23 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei 23 (60)
++..+|++|+++....-|..+
T Consensus 70 y~~~~gl~yl~itd~~yp~r~ 90 (199)
T 3kyq_A 70 YVRSDSLAGVVIADSEYPSRV 90 (199)
T ss_dssp EECTTSEEEEEEEETTSCHHH
T ss_pred EEecCCEEEEEEECCCCCHHH
Confidence 577899999999999888665
No 218
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=34.88 E-value=8.1 Score=28.50 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=26.4
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
++|+|+|.+++-.++.+ ...-.+.+.+.|++.+.+.....
T Consensus 645 ~~LkpgG~L~~s~~~~~-~~~~~~~l~~~g~~~~~i~~~~l 684 (703)
T 3v97_A 645 RLLRAGGTIMFSNNKRG-FRMDLDGLAKLGLKAQEITQKTL 684 (703)
T ss_dssp HHEEEEEEEEEEECCTT-CCCCHHHHHHTTEEEEECTTTTC
T ss_pred HhcCCCcEEEEEECCcc-cccCHHHHHHcCCceeeeeeccC
Confidence 57899999986655522 23335677788998776655443
No 219
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=34.58 E-value=18 Score=22.90 Aligned_cols=33 Identities=21% Similarity=0.042 Sum_probs=20.7
Q ss_pred ceecCCCeEEEEEeccCC---HHHHHHHHhhC-CceE
Q psy477 2 DSLSDKGILYLLVIKEND---PEDIIHCLSQY-GFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~---p~ei~~~~~~~-G~~~ 34 (60)
++|+|+|++....++.+. .+.|...++++ +|+.
T Consensus 199 ~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~ 235 (274)
T 3ajd_A 199 DLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVEL 235 (274)
T ss_dssp HHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEE
T ss_pred HhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEE
Confidence 468999999888887642 33344445443 5553
No 220
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=34.28 E-value=58 Score=17.65 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=26.6
Q ss_pred cCCHHHHHHHHhhCCce---EEEEEEEeeCCeEEEEEEEEe
Q psy477 17 ENDPEDIIHCLSQYGFM---GKTLLTRQVPGEKLSVLKFTR 54 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~---~~vv~~rk~~~E~L~Vlr~~r 54 (60)
-||....-..+.+.||+ .-.+..-|-++...|.+||+-
T Consensus 22 kndlqnmsadlakngfkghqgvacstvkdgnkdvymikfsl 62 (77)
T 1kvd_B 22 KNDLQNMSADLAKNGFKGHQGVACSTVKDGNKDVYMIKFSL 62 (77)
T ss_dssp HHHHHHHHHHHHHHTTTTSCEEEEEEEEETTEEEEEEEEEE
T ss_pred hhhHHHhhHHHHhcCcccccceeeeeeecCCccEEEEEEEe
Confidence 35555555556665554 445666788999999999986
No 221
>2nut_C Vesicle-trafficking protein SEC22B; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_C 3egd_C 3egx_C 1ifq_A
Probab=34.12 E-value=28 Score=21.41 Aligned_cols=22 Identities=18% Similarity=0.508 Sum_probs=18.0
Q ss_pred eecCCCeEEEEEeccCCHHHHH
Q psy477 3 SLSDKGILYLLVIKENDPEDII 24 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei~ 24 (60)
++..+|++|++++...-|..+.
T Consensus 64 y~~~~gl~~l~i~d~~yp~r~a 85 (196)
T 2nut_C 64 YIIEQGVCYLVLCEAAFPKKLA 85 (196)
T ss_dssp EEEETTEEEEEEEETTSCHHHH
T ss_pred EEeCCCeEEEEEEcCCcchHHH
Confidence 5678999999999988876653
No 222
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=34.03 E-value=17 Score=22.62 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=22.5
Q ss_pred CCCeEEEEEec--------------cCCHHHHHHHHhhCCceEEEE
Q psy477 6 DKGILYLLVIK--------------ENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 6 ~~G~~YLv~~~--------------~N~p~ei~~~~~~~G~~~~vv 37 (60)
|.|.++++--. +.|.+.+.+.+++.||.+++.
T Consensus 43 ~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~V~v~ 88 (173)
T 2ql9_A 43 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVY 88 (173)
T ss_dssp EEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEE
Confidence 57887776432 244677788888899988764
No 223
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=33.75 E-value=35 Score=15.44 Aligned_cols=18 Identities=11% Similarity=0.187 Sum_probs=14.5
Q ss_pred cCCHHHHHHHHhhCCceE
Q psy477 17 ENDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~ 34 (60)
.-+++++.+.+++.||.+
T Consensus 46 ~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 46 ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp SSCHHHHHHHHHHTTCCC
T ss_pred cCCHHHHHHHHHHcCCCC
Confidence 446889999999999864
No 224
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli}
Probab=32.86 E-value=23 Score=23.73 Aligned_cols=29 Identities=10% Similarity=0.227 Sum_probs=23.1
Q ss_pred EEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477 11 YLLVIKENDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 11 YLv~~~~N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
+++++...+-+++++.+++.|..+.+|.+
T Consensus 305 ll~~v~~~~~~~~~~~l~~~g~~a~~IG~ 333 (347)
T 3u0o_A 305 LLLAVMPEAENEVKATAAEFGIELTAIGE 333 (347)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCCCCCCEE
T ss_pred EEEEEcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 56666767789999999999988776665
No 225
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=32.78 E-value=44 Score=15.85 Aligned_cols=19 Identities=16% Similarity=0.378 Sum_probs=15.8
Q ss_pred CHHHHHHHHhhCCceEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv 37 (60)
+++++.+.+.+.||.+.+.
T Consensus 52 ~~~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 52 TPKTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp CHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHcCCceEee
Confidence 5788999999999987654
No 226
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=32.42 E-value=1.1e+02 Score=20.13 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=19.9
Q ss_pred HHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477 20 PEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~ 55 (60)
+++..+.+++.||....+..-.. ..+|+-++++
T Consensus 335 ~~e~~~ll~~AGF~~v~~~~~~~---~~~vie~~k~ 367 (368)
T 3reo_A 335 EKEFQALAMASGFRGFKVASCAF---NTYVMEFLKT 367 (368)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEET---TEEEEEEECC
T ss_pred HHHHHHHHHHCCCeeeEEEEeCC---CcEEEEEEeC
Confidence 56677888888998654433222 2456666653
No 227
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=31.82 E-value=59 Score=18.07 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=21.0
Q ss_pred CCeEEEEEecc-CCHHHHHHHHhhCCceEEEEEE
Q psy477 7 KGILYLLVIKE-NDPEDIIHCLSQYGFMGKTLLT 39 (60)
Q Consensus 7 ~G~~YLv~~~~-N~p~ei~~~~~~~G~~~~vv~~ 39 (60)
-|.+.+-+.-+ .+.++.++.|++.|..++++..
T Consensus 64 ~G~L~v~l~G~~~~~~~ai~~L~~~~v~vEvl~~ 97 (106)
T 3dhx_A 64 FGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGY 97 (106)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEEEEeCCHHHHHHHHHHHHHCCCEEEEeee
Confidence 35544444321 1356678889999999998653
No 228
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=31.27 E-value=29 Score=16.24 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=14.7
Q ss_pred CHHHHHHHHhhCCceEEE
Q psy477 19 DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~v 36 (60)
+++++.+.+++.||.+..
T Consensus 53 ~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 53 SPETLRGAIEDMGFDATL 70 (72)
T ss_dssp CHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHCCCCcEe
Confidence 578899999999998653
No 229
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=31.26 E-value=32 Score=16.06 Aligned_cols=19 Identities=5% Similarity=0.230 Sum_probs=15.2
Q ss_pred CCHHHHHHHHhhCCceEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~v 36 (60)
.+++++.+.+...||.+.+
T Consensus 52 ~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 52 TSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp CCHHHHHHHHHHTTCCCEE
T ss_pred CCHHHHHHHHHhcCCCeEe
Confidence 3578899999999998653
No 230
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=30.21 E-value=23 Score=23.68 Aligned_cols=20 Identities=25% Similarity=0.537 Sum_probs=16.2
Q ss_pred CCHHHHHHHHhhCCceEEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~vv 37 (60)
||-+.+.+.+++.||++.+.
T Consensus 94 ~Da~~L~~~f~~LGF~V~~~ 113 (305)
T 1f1j_A 94 KDAEALFKCFRSLGFDVIVY 113 (305)
T ss_dssp HHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEe
Confidence 56778889999999987753
No 231
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=30.18 E-value=67 Score=19.52 Aligned_cols=26 Identities=12% Similarity=0.137 Sum_probs=20.6
Q ss_pred CCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477 30 YGFMGKTLLTRQVPGEKLSVLKFTRS 55 (60)
Q Consensus 30 ~G~~~~vv~~rk~~~E~L~Vlr~~r~ 55 (60)
.|+.++.+-.++++.|++.++.-.+.
T Consensus 135 LG~~~~~v~~~~ig~~~~~~~~gc~~ 160 (178)
T 1gml_A 135 VGTGAGLLEIKKIGDEYFTFITDCKD 160 (178)
T ss_dssp SBCCEEEEEEEEETTEEEEEEEEESS
T ss_pred hCCcccEEEEEEECCeEEEEEECCCC
Confidence 58878888899999998887775443
No 232
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=29.46 E-value=43 Score=23.54 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=23.8
Q ss_pred ceecCCCeEEEEEeccC---CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN---DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|++...+|+.+ +.+.|...++++||+..
T Consensus 222 ~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 222 KMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVTIE 258 (456)
T ss_dssp HTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEE
T ss_pred HhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCEEE
Confidence 46899999888888764 24455566677786544
No 233
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=29.04 E-value=39 Score=15.21 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=13.8
Q ss_pred CCHHHHHHHHhhCCceE
Q psy477 18 NDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~ 34 (60)
.+++++.+.+...||.+
T Consensus 51 ~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 51 VSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHcCCCc
Confidence 35788999999999975
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=29.03 E-value=36 Score=23.04 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=22.3
Q ss_pred ceecCCCeEEEEEeccC---CHHHHHHHHhhC-CceE
Q psy477 2 DSLSDKGILYLLVIKEN---DPEDIIHCLSQY-GFMG 34 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N---~p~ei~~~~~~~-G~~~ 34 (60)
++|+|+|++.+..++.+ +.+.|.+.++++ +|..
T Consensus 362 ~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 (429)
T ss_dssp GGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEE
T ss_pred HhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEE
Confidence 57899999988887764 234455666665 5653
No 235
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=28.79 E-value=33 Score=20.94 Aligned_cols=12 Identities=8% Similarity=0.307 Sum_probs=9.5
Q ss_pred ceecCCCeEEEE
Q psy477 2 DSLSDKGILYLL 13 (60)
Q Consensus 2 ~~Ls~~G~~YLv 13 (60)
++|+|+|+++++
T Consensus 202 ~~LkpgG~l~~~ 213 (250)
T 1o9g_A 202 SALPAHAVIAVT 213 (250)
T ss_dssp HHSCTTCEEEEE
T ss_pred HhcCCCcEEEEe
Confidence 468999998873
No 236
>3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus}
Probab=28.70 E-value=1.5e+02 Score=20.66 Aligned_cols=37 Identities=14% Similarity=0.076 Sum_probs=29.2
Q ss_pred ccCCHHHHHHHHhhCCceEEEEEE--EeeCCeEEEEEEEEe
Q psy477 16 KENDPEDIIHCLSQYGFMGKTLLT--RQVPGEKLSVLKFTR 54 (60)
Q Consensus 16 ~~N~p~ei~~~~~~~G~~~~vv~~--rk~~~E~L~Vlr~~r 54 (60)
+.-+.++.++.|++.|..+++... ++.+++ ++++|.|
T Consensus 312 ~~~~~~~~~~hl~~~g~~~~i~~~~~~~~~~~--~~v~~~k 350 (370)
T 3qwu_A 312 KKENAIALLELLSKTSKHIQVKERRLEKEGDY--WRLEFDK 350 (370)
T ss_dssp CHHHHHHHHHHHHHSCSSEEEEEEEEEEETTE--EEEEEEE
T ss_pred CHHHHHHHHHHHHHcCceEEEecccceecCCE--EEEEEEE
Confidence 444578889999999999998888 888777 6666665
No 237
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=28.56 E-value=45 Score=20.63 Aligned_cols=32 Identities=3% Similarity=0.033 Sum_probs=21.4
Q ss_pred ceecCCCeEEEEEeccC-------------CHHHHHHHHhhCCceEE
Q psy477 2 DSLSDKGILYLLVIKEN-------------DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N-------------~p~ei~~~~~~~G~~~~ 35 (60)
++|+|+|.++++..... .++++.+.+.. |+..
T Consensus 211 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 211 EHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp HTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred HhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEE
Confidence 46899999888764322 26677777755 6543
No 238
>2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus}
Probab=28.48 E-value=1.2e+02 Score=19.87 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=26.8
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV 42 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~ 42 (60)
|.-+++++...+-+++.+.+++.|..+.+|.+-..
T Consensus 302 g~gll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~ 336 (348)
T 2z01_A 302 GIGLVLAVSPETAAPLVEWLSERGEPAYIIGEVAK 336 (348)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHTTCCCEEEEEEEE
T ss_pred CCeEEEEEcHHHHHHHHHHHHhcCCCeEEEEEEec
Confidence 43467777776788999999999988888887543
No 239
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.11 E-value=73 Score=16.91 Aligned_cols=22 Identities=9% Similarity=-0.079 Sum_probs=18.1
Q ss_pred cCCHHHHHHHHhhCCceEEEEE
Q psy477 17 ENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
..++++|.+.+++.||.+.++.
T Consensus 63 ~~~~~~i~~~i~~~Gy~~~~~~ 84 (98)
T 2crl_A 63 TLPSQEVQALLEGTGRQAVLKG 84 (98)
T ss_dssp SSCHHHHHHHHHTTTSCEEEEE
T ss_pred eCCHHHHHHHHHHhCCceEEcc
Confidence 4578999999999999987643
No 240
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=28.05 E-value=51 Score=21.51 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=16.4
Q ss_pred ceecCCCeEEEEEeccCCHH--HHHHHHhh
Q psy477 2 DSLSDKGILYLLVIKENDPE--DIIHCLSQ 29 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~--ei~~~~~~ 29 (60)
++|+|+|.|.+-+....+|+ +++..++.
T Consensus 179 ~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~ 208 (305)
T 2p41_A 179 NWLSNNTQFCVKVLNPYMSSVIEKMEALQR 208 (305)
T ss_dssp HHCCTTCEEEEEESCCCSHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEeCCCCCchHHHHHHHHHH
Confidence 46999997665443332233 56666554
No 241
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A*
Probab=27.84 E-value=56 Score=21.28 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=23.6
Q ss_pred ec-CCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477 4 LS-DKGILYLLVIKENDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 4 Ls-~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv 37 (60)
|| .|+++|.++-++..-+++.+.+++.|+..++.
T Consensus 254 mSGsGptvfal~~~~~~a~~~~~~l~~~g~~~~v~ 288 (306)
T 3pyf_A 254 VSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVR 288 (306)
T ss_dssp ECTTSSEEEEEESSHHHHHHHHHHHHHTTSSSEEE
T ss_pred EcCcchhheEEeCCHHHHHHHHHHHHhcCCcceEE
Confidence 55 36677777655556788899999888755543
No 242
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=27.61 E-value=53 Score=15.11 Aligned_cols=19 Identities=11% Similarity=0.422 Sum_probs=14.7
Q ss_pred CCHHHHHHHHhhCCceEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~v 36 (60)
.+++++.+.+++.||.+..
T Consensus 51 ~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 51 TTPQILTDAVERAGYHARV 69 (71)
T ss_dssp -CHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHcCCCcee
Confidence 3578889989999998653
No 243
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=27.57 E-value=50 Score=22.12 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=20.9
Q ss_pred ceecCCCeEEEEEeccCC-HHHHHHH----HhhCCce
Q psy477 2 DSLSDKGILYLLVIKEND-PEDIIHC----LSQYGFM 33 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~-p~ei~~~----~~~~G~~ 33 (60)
++|+|+|.+|+-..+.+- ++...+. ..+.|..
T Consensus 319 ~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 319 EILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred HhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 568999999888776653 4444333 3445666
No 244
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=27.26 E-value=51 Score=21.06 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=20.2
Q ss_pred ceecCCCeEEEEEeccCCHHHHHHHHhhC
Q psy477 2 DSLSDKGILYLLVIKENDPEDIIHCLSQY 30 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~ 30 (60)
+.|.|+|.+++. +..+..+++.+.+++.
T Consensus 237 ~~l~pgG~l~~e-~~~~q~~~v~~~~~~~ 264 (284)
T 1nv8_A 237 RYDTSGKIVLME-IGEDQVEELKKIVSDT 264 (284)
T ss_dssp HCCCTTCEEEEE-CCTTCHHHHTTTSTTC
T ss_pred hcCCCCCEEEEE-ECchHHHHHHHHHHhC
Confidence 467899998864 4455677888877764
No 245
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=26.97 E-value=44 Score=20.04 Aligned_cols=15 Identities=27% Similarity=0.523 Sum_probs=11.4
Q ss_pred ceecCCCeEEEEEec
Q psy477 2 DSLSDKGILYLLVIK 16 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~ 16 (60)
+.|+|+|.++++-..
T Consensus 151 ~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 151 ILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred HHcCCCCEEEEEeCC
Confidence 468999998777654
No 246
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=26.76 E-value=22 Score=20.81 Aligned_cols=19 Identities=26% Similarity=0.340 Sum_probs=14.1
Q ss_pred ceecCCCeEEEEEeccCCH
Q psy477 2 DSLSDKGILYLLVIKENDP 20 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~N~p 20 (60)
++|+|+|.+++.......+
T Consensus 120 ~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 120 RVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp HHEEEEEEEEEEEECTTSH
T ss_pred HHcCCCCEEEEEecCCcCc
Confidence 4689999998887655443
No 247
>2vx8_A Nucleoporin-like protein RIP, vesicle-associated membrane protein 7; endocytosis,exocytosis, endocytosis, exocytosis, acetylation, coiled coil; 2.2A {Homo sapiens} PDB: 2dmw_A
Probab=26.63 E-value=57 Score=19.97 Aligned_cols=21 Identities=14% Similarity=0.301 Sum_probs=17.1
Q ss_pred eecCCCeEEEEEeccCCHHHH
Q psy477 3 SLSDKGILYLLVIKENDPEDI 23 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N~p~ei 23 (60)
++..+|.+|+++....-|..+
T Consensus 97 yl~~ngl~yl~I~D~~yp~r~ 117 (169)
T 2vx8_A 97 YICQDRIVYLCITDDDFERSR 117 (169)
T ss_dssp EEEETTEEEEEEEETTSCHHH
T ss_pred EEEECCEEEEEEEccccchHH
Confidence 566789999999998886554
No 248
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=26.02 E-value=69 Score=18.87 Aligned_cols=33 Identities=12% Similarity=-0.027 Sum_probs=27.4
Q ss_pred eEEEEEeccCCHHHHHHHHhhC-CceEEEEEEEe
Q psy477 9 ILYLLVIKENDPEDIIHCLSQY-GFMGKTLLTRQ 41 (60)
Q Consensus 9 ~~YLv~~~~N~p~ei~~~~~~~-G~~~~vv~~rk 41 (60)
-..+|++.+.|-...++.+++. |.++.+++.++
T Consensus 110 d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 110 DRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPR 143 (165)
T ss_dssp SEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGG
T ss_pred CEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCC
Confidence 3467888899999999999995 99999887644
No 249
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=25.98 E-value=58 Score=15.03 Aligned_cols=19 Identities=11% Similarity=0.429 Sum_probs=15.6
Q ss_pred CCHHHHHHHHhhCCceEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~v 36 (60)
.+++++.+.+++.||.+..
T Consensus 48 ~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 48 TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp SCHHHHHHHHHTTTSEEEC
T ss_pred CCHHHHHHHHHHCCCceEe
Confidence 4688999999999998653
No 250
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=25.88 E-value=34 Score=21.09 Aligned_cols=15 Identities=33% Similarity=0.476 Sum_probs=12.9
Q ss_pred CceecCCCeEEEEEe
Q psy477 1 MDSLSDKGILYLLVI 15 (60)
Q Consensus 1 ~~~Ls~~G~~YLv~~ 15 (60)
+.+||++|.|+-++.
T Consensus 38 ~KIlS~DgtF~N~~m 52 (142)
T 4gzv_A 38 FKVLSDDGRIVNFTI 52 (142)
T ss_dssp EEEECTTSEEEEEEC
T ss_pred eEEECCCCcEEEEEE
Confidence 368999999998886
No 251
>3lfk_A MSCTV, MARR like protein, TVG0766549; multiple antibiotic resistance regulator, transcriptional regulator, winged helix-turn-helix motif; HET: CIT; 1.60A {Thermoplasma volcanium}
Probab=25.73 E-value=38 Score=20.14 Aligned_cols=28 Identities=36% Similarity=0.737 Sum_probs=20.7
Q ss_pred CCHHHHHHHHhhCCceEEEEEEEeeCCeEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLS 48 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~ 48 (60)
-||+.|++.+-..||..+- +.+. +|.+.
T Consensus 64 kdpe~vlknl~dygfa~~d--kerl-gekii 91 (129)
T 3lfk_A 64 KDPESVLKNLMDYGFALED--KERL-GEKIV 91 (129)
T ss_dssp SSHHHHHHHHHHHTSEEEE--EETT-EEEEE
T ss_pred CCHHHHHHHHHhccccccc--hHHh-CCeeE
Confidence 5899999999999999873 2333 55543
No 252
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=25.66 E-value=79 Score=17.19 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=20.3
Q ss_pred CeEEEEEecc-CCHHHHHHHHhhCCceEEEE
Q psy477 8 GILYLLVIKE-NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 8 G~~YLv~~~~-N~p~ei~~~~~~~G~~~~vv 37 (60)
|.+.+-+.-+ .+.++.++.+++.|..++++
T Consensus 67 G~L~v~l~G~~~~~~~ai~~L~~~~v~vEvl 97 (101)
T 2qrr_A 67 GMMVAELFGNEQDDSAAIEYLRENNVKVEVL 97 (101)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHHHHHHcCCEEEEe
Confidence 5555544421 23567788999999999987
No 253
>2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A
Probab=25.19 E-value=66 Score=21.17 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=26.5
Q ss_pred CCeEEEEEeccCCHHHHHHHHhh--CCceEEEEEEEee
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQ--YGFMGKTLLTRQV 42 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~--~G~~~~vv~~rk~ 42 (60)
.|. +|+++...+.+++.+.+++ .|..+.+|.+-..
T Consensus 270 ~G~-ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v~~ 306 (334)
T 2rb9_A 270 EGK-LVIAVERNAAEQVLAALHSHPLGKDAALIGEVVE 306 (334)
T ss_dssp SSC-EEEEECGGGHHHHHHHHHTSGGGTTCEEEEEEES
T ss_pred cCe-EEEEEChHHHHHHHHHHhhcCCCCCEEEEEEEEe
Confidence 465 6777777788999999988 6887788876443
No 254
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae}
Probab=24.98 E-value=34 Score=21.34 Aligned_cols=29 Identities=17% Similarity=0.239 Sum_probs=19.9
Q ss_pred CCCeEEEEEeccCCHHHHHHHHhhCCceE
Q psy477 6 DKGILYLLVIKENDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~ 34 (60)
|+|+++.++-...+.+++.+.+++.|+..
T Consensus 258 ~Gg~v~~l~~~~~~~~~~~~~l~~~~~~~ 286 (292)
T 2oi2_A 258 LGGCIIALVTNLTHAQELAERLEEKGAVQ 286 (292)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHHHTCSE
T ss_pred CCcEEEEEecCchHHHHHHHHHHhcCcce
Confidence 34577777654456778888888877643
No 255
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=24.93 E-value=17 Score=23.36 Aligned_cols=28 Identities=7% Similarity=0.024 Sum_probs=16.2
Q ss_pred ceecCCC--eEEEEEeccCCHH--HHHHHHhh
Q psy477 2 DSLSDKG--ILYLLVIKENDPE--DIIHCLSQ 29 (60)
Q Consensus 2 ~~Ls~~G--~~YLv~~~~N~p~--ei~~~~~~ 29 (60)
++|.|+| .|.+-+.....++ +.++.+.+
T Consensus 171 r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~ 202 (265)
T 2oxt_A 171 KWKVKNPSADFVVKVLCPYSVEVMERLSVMQR 202 (265)
T ss_dssp HHHHHCTTCEEEEEESCTTSHHHHHHHHHHHH
T ss_pred HHhccCCCeEEEEEeCCCCChhHHHHHHHHHH
Confidence 4689999 7766554444442 44444444
No 256
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=24.87 E-value=66 Score=16.37 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=13.9
Q ss_pred CHHHHHHHHhhCCceE
Q psy477 19 DPEDIIHCLSQYGFMG 34 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~ 34 (60)
+..|+++.+++.||..
T Consensus 6 ~~~elik~L~~~G~~~ 21 (70)
T 1whz_A 6 RPEEVARKLRRLGFVE 21 (70)
T ss_dssp CHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHCCCEE
Confidence 4689999999999974
No 257
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=24.58 E-value=85 Score=19.01 Aligned_cols=16 Identities=6% Similarity=0.179 Sum_probs=11.1
Q ss_pred HHHHHHHHhhCCceEE
Q psy477 20 PEDIIHCLSQYGFMGK 35 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~ 35 (60)
++++.+.+++.||...
T Consensus 199 ~~~l~~~l~~aGf~~~ 214 (275)
T 3bkx_A 199 PDTLAQIAHDNTWTYT 214 (275)
T ss_dssp HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHCCCeeE
Confidence 5567777777788754
No 258
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=24.52 E-value=60 Score=14.71 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=13.9
Q ss_pred CHHHHHHHHhhCCceEE
Q psy477 19 DPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~ 35 (60)
+++++.+.+...||.+.
T Consensus 53 ~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 53 SEITIQERIAALGYTLA 69 (71)
T ss_dssp CTHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHcCCCcc
Confidence 56888998999999764
No 259
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=24.49 E-value=91 Score=19.21 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=28.1
Q ss_pred EEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEEE
Q psy477 12 LLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 12 Lv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr~ 52 (60)
++.-..+.+.++.+.+.+.|+. ..++.-++++.++=.|++.
T Consensus 156 vl~~~~~~~~~i~~~L~~~g~~~~~~v~v~~~l~~~~E~i~~~ 198 (239)
T 1va0_A 156 VVLMGVGRRVWIAKELLRLGRDPREPTLFVERASTPKERRVHA 198 (239)
T ss_dssp EEESCSTTHHHHHHHHHHTTCCTTCEEEEEETTTSTTCEEEEE
T ss_pred EEEccHHHHHHHHHHHHhcCCCCCCcEEEEEECCCCCcEEEEe
Confidence 4555667899999999998884 4666667776544344443
No 260
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=24.30 E-value=64 Score=14.91 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=16.3
Q ss_pred CCHHHHHHHHhhCCceEEEE
Q psy477 18 NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 18 N~p~ei~~~~~~~G~~~~vv 37 (60)
.+++++.+.+++.||.+..+
T Consensus 50 ~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 50 VTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp SCHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHCCCceEEc
Confidence 46788999999999987654
No 261
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=24.23 E-value=1.4e+02 Score=19.35 Aligned_cols=46 Identities=13% Similarity=0.050 Sum_probs=30.3
Q ss_pred CCeEEEEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEEE
Q psy477 7 KGILYLLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr~ 52 (60)
.+...++.-..+.+.++.+.+.+.|+. ..++.-++++.+.-.|++.
T Consensus 185 ~~~tlVl~~~~~~~~~i~~~L~~~G~~~~~~v~v~~~l~~~~E~i~~~ 232 (294)
T 2ybo_A 185 GKQTLVFYMGLGNLAEIAARLVEHGLASDTPAALVSQGTQAGQQVTRG 232 (294)
T ss_dssp SSCEEEEESCGGGHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEE
T ss_pred CCCeEEEECcHHHHHHHHHHHHhcCCCCCCEEEEEEeCCCCceEEEEe
Confidence 334445555566899999999998885 4566667776544444443
No 262
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=24.23 E-value=73 Score=18.69 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=15.7
Q ss_pred CHHHHHHHHhhCCceEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv 37 (60)
.++++.+.+++.||.++.+
T Consensus 206 t~~~~~~ll~~aGF~v~~~ 224 (239)
T 3bxo_A 206 HQAEYEAAFTAAGLRVEYL 224 (239)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEe
Confidence 4899999999999976543
No 263
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=24.19 E-value=62 Score=21.67 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=24.5
Q ss_pred eecCCCeEEEEEeccC----CHH---HHHHHHhhCCceEEE
Q psy477 3 SLSDKGILYLLVIKEN----DPE---DIIHCLSQYGFMGKT 36 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N----~p~---ei~~~~~~~G~~~~v 36 (60)
.|.++..+-+|+-+.. +++ .-++.+++.||++.+
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~ 49 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE 49 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE
Confidence 4778888888887652 223 446788889999765
No 264
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=23.97 E-value=21 Score=21.03 Aligned_cols=16 Identities=31% Similarity=0.324 Sum_probs=12.4
Q ss_pred ceecCCCeEEEEEecc
Q psy477 2 DSLSDKGILYLLVIKE 17 (60)
Q Consensus 2 ~~Ls~~G~~YLv~~~~ 17 (60)
+.|+|+|++++.+...
T Consensus 165 ~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 165 RQLKDGGKLLMPVGRY 180 (215)
T ss_dssp HTEEEEEEEEEEESSS
T ss_pred HHcCCCcEEEEEECCC
Confidence 4689999998887544
No 265
>2jmk_A Hypothetical protein TA0956; protein binding; NMR {Thermoplasma acidophilum} PDB: 2k24_A
Probab=23.74 E-value=37 Score=19.93 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=13.9
Q ss_pred HHHHHHHHhhCCceEEE
Q psy477 20 PEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~v 36 (60)
.+++++..+..||.+++
T Consensus 93 i~ei~kkykd~GykvE~ 109 (111)
T 2jmk_A 93 IKATAEKFKNKGFKVET 109 (111)
T ss_dssp HHHHHHHGGGGCCEEEE
T ss_pred HHHHHHHhhcCCceeec
Confidence 67778888889999875
No 266
>2gcx_A FEOA, ferrous iron transport protein A; NMR {Klebsiella pneumoniae} SCOP: b.34.1.2
Probab=23.42 E-value=84 Score=15.97 Aligned_cols=48 Identities=8% Similarity=0.067 Sum_probs=27.6
Q ss_pred ecCCCeEEEEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEE
Q psy477 4 LSDKGILYLLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLK 51 (60)
Q Consensus 4 Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr 51 (60)
|.++..+.+.-+..+...++.+.+.++||. .++...++.++-.-.+++
T Consensus 3 l~~G~~~~I~~i~~~~~~~~~~rL~~lGl~pG~~v~v~~~~p~~gpi~v~ 52 (75)
T 2gcx_A 3 FTPDSAWKITGFSRDISPAYRQKLLSLGMLPGSSFHVVRVAPLGDPVHIE 52 (75)
T ss_dssp CCTTSEEEEECCCSSCCHHHHHHHTTTTCCSSEEEEECCCCSSCCEEEEE
T ss_pred CCCCCEEEEEEEeCCCCHHHHHHHHHCCCCCCCEEEEEEeCCCCCCEEEE
Confidence 344555444444432256789999999987 444444565544444444
No 267
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=22.59 E-value=1.5e+02 Score=18.87 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=30.0
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr~ 52 (60)
+...++.-..+++.++.+.+.+.|+. ..++.-++++.++-.|++.
T Consensus 177 ~~tlVl~~~~~~~~~i~~~L~~~G~~~~~~v~v~~~l~~~~E~i~~~ 223 (280)
T 1s4d_A 177 SPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLET 223 (280)
T ss_dssp CSEEEEESCSTTHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEE
T ss_pred CCeEEEECchhhHHHHHHHHHhcCCCCCCEEEEEEeCCCCCeEEEEe
Confidence 33445555667799999999998885 4566667776554444443
No 268
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=22.38 E-value=65 Score=17.53 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=20.1
Q ss_pred CeEEEEEecc-CCHHHHHHHHhhCCceEEEE
Q psy477 8 GILYLLVIKE-NDPEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 8 G~~YLv~~~~-N~p~ei~~~~~~~G~~~~vv 37 (60)
|.+.+-+.-. .+.++.++.|++.|..++++
T Consensus 67 G~L~v~l~G~~~~~~~ai~~L~~~~v~vEvl 97 (100)
T 2qsw_A 67 GSLYIQLLGEEQNILAAIEGLRKLRVETEVI 97 (100)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCEEEES
T ss_pred EEEEEEEECCHHHHHHHHHHHHHcCCEEEEc
Confidence 5555544421 23667788899999998875
No 269
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=22.37 E-value=54 Score=15.74 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=14.7
Q ss_pred CHHHHHHHHhhCCceEEE
Q psy477 19 DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~v 36 (60)
+++++.+.+++.||.+.+
T Consensus 58 ~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 58 TPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp CHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHCCCceEe
Confidence 578899999999998754
No 270
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=22.27 E-value=70 Score=21.90 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=24.9
Q ss_pred eecCCCeEEEEEeccC----CH---HHHHHHHhhCCceEEE
Q psy477 3 SLSDKGILYLLVIKEN----DP---EDIIHCLSQYGFMGKT 36 (60)
Q Consensus 3 ~Ls~~G~~YLv~~~~N----~p---~ei~~~~~~~G~~~~v 36 (60)
.|.++..+.+|+-|.. ++ +.-++.+++.||++.+
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~ 79 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVS 79 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE
Confidence 4788999999987753 23 3446788899998764
No 271
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=22.16 E-value=97 Score=16.26 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=20.7
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~ 35 (60)
+-+.-++..-.|.++..+.+++.|....
T Consensus 76 ~g~~hiaf~v~di~~~~~~l~~~G~~~~ 103 (133)
T 3hdp_A 76 STPYHICYEVEDIQKSIEEMSQIGYTLF 103 (133)
T ss_dssp CEEEEEEEEESCHHHHHHHHTTTTEEEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHcCCccc
Confidence 3344555566789999999999997653
No 272
>3ac6_A Phosphoribosylformylglycinamidine synthase 2; purine metabolism, ATP-binding, ligase, nucleotide-binding, biosynthesis; HET: ADP; 2.35A {Thermus thermophilus} PDB: 3viu_A*
Probab=21.54 E-value=1.4e+02 Score=21.79 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.8
Q ss_pred EEEEEeccCCHHHHHHHHhhCCceEEEEEEEe
Q psy477 10 LYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQ 41 (60)
Q Consensus 10 ~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk 41 (60)
-+++++...+.+++.+.+++.|..+.+|++-.
T Consensus 307 ~ll~~v~~~~~~~~~~~~~~~~~~~~vIG~vt 338 (725)
T 3ac6_A 307 RMVLVPKEGKEKALEEVFGRWGLDCVPVARTI 338 (725)
T ss_dssp EEEEEECTTCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cEEEEEChHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 46777788889999999999999999888744
No 273
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=21.34 E-value=68 Score=21.44 Aligned_cols=27 Identities=7% Similarity=0.053 Sum_probs=19.9
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMG 34 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~ 34 (60)
|+++.++-...+.+++.+.+++.|+..
T Consensus 320 g~vial~~~~~~~~~l~~~l~~~g~~~ 346 (365)
T 3k17_A 320 DCGIAFSKTKELAEKLVNEWEKLGIKH 346 (365)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEE
Confidence 676666654456788899999989865
No 274
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=21.26 E-value=1.5e+02 Score=18.85 Aligned_cols=44 Identities=5% Similarity=0.096 Sum_probs=28.3
Q ss_pred eEEEEEeccCCHHHHHHHHhhCCce--EEEEEEEeeCCeEEEEEEE
Q psy477 9 ILYLLVIKENDPEDIIHCLSQYGFM--GKTLLTRQVPGEKLSVLKF 52 (60)
Q Consensus 9 ~~YLv~~~~N~p~ei~~~~~~~G~~--~~vv~~rk~~~E~L~Vlr~ 52 (60)
...++.-..+.+.++.+.+.+.|+. ..++.-++++.+.=.|++.
T Consensus 178 ~tlvl~~~~~~~~~i~~~L~~~g~~~~~~v~v~~~lg~~~E~i~~~ 223 (285)
T 1cbf_A 178 CTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVRT 223 (285)
T ss_dssp SEEEEESCTTCHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEE
T ss_pred CeEEEECcHHHHHHHHHHHHhcCCCCCCeEEEEEECCcCCcEEEEe
Confidence 3344444556799999999987764 5666667776544444443
No 275
>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} SCOP: d.25.1.1 PDB: 3rpx_A
Probab=21.23 E-value=1e+02 Score=19.26 Aligned_cols=16 Identities=44% Similarity=0.696 Sum_probs=13.8
Q ss_pred EEEEEEeeCCeEEEEE
Q psy477 35 KTLLTRQVPGEKLSVL 50 (60)
Q Consensus 35 ~vv~~rk~~~E~L~Vl 50 (60)
+|++.|+.++|++.|.
T Consensus 44 ~v~L~r~~~~E~I~V~ 59 (209)
T 1p32_A 44 EAKLVRKVAGEKITVT 59 (209)
T ss_dssp EEEEEEEETTEEEEEE
T ss_pred EEEEEEecCCcEEEEE
Confidence 5789999999999774
No 276
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=21.21 E-value=90 Score=17.36 Aligned_cols=32 Identities=6% Similarity=-0.028 Sum_probs=21.1
Q ss_pred cCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477 5 SDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 5 s~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
...| -+|.++.++|+.+.+.+++.|+...++.
T Consensus 66 ~~~~--~vv~is~d~~~~~~~~~~~~~~~~~~l~ 97 (159)
T 2a4v_A 66 KEYA--AVFGLSADSVTSQKKFQSKQNLPYHLLS 97 (159)
T ss_dssp TTTC--EEEEEESCCHHHHHHHHHHHTCSSEEEE
T ss_pred HhCC--cEEEEeCCCHHHHHHHHHHhCCCceEEE
Confidence 4456 4555566688888888887776655443
No 277
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=21.16 E-value=1.8e+02 Score=19.00 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=12.3
Q ss_pred HHHHHHHHhhCCceEEEE
Q psy477 20 PEDIIHCLSQYGFMGKTL 37 (60)
Q Consensus 20 p~ei~~~~~~~G~~~~vv 37 (60)
+++..+.+++.||...-+
T Consensus 333 ~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 333 EREFQALARGAGFTGVKS 350 (364)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCceEEE
Confidence 456677777889885543
No 278
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=21.16 E-value=72 Score=14.35 Aligned_cols=15 Identities=20% Similarity=0.089 Sum_probs=12.3
Q ss_pred CHHHHHHHHhhCCce
Q psy477 19 DPEDIIHCLSQYGFM 33 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~ 33 (60)
+++++.+.+++.||.
T Consensus 50 ~~~~i~~~i~~~G~~ 64 (66)
T 1yg0_A 50 TQDLIKEALLDAGQE 64 (66)
T ss_dssp CHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 678888888888885
No 279
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=21.14 E-value=97 Score=15.87 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=22.6
Q ss_pred CeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477 8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLL 38 (60)
Q Consensus 8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~ 38 (60)
|...=|.+.-....++.+.|++.|...+++.
T Consensus 46 ~~~vdI~V~p~~~~~f~~~L~~~~I~y~Vli 76 (78)
T 2gjf_A 46 GQPVVILIPSDMVEWFLEMLKAKGIPFTVYV 76 (78)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHTCCEEEEE
T ss_pred CCeEEEEECHHHHHHHHHHHHHCCCcEEEEe
Confidence 4334455566678888999999998888764
No 280
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=21.04 E-value=98 Score=19.96 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.5
Q ss_pred CHHHHHHHHhhCCceEEEEEEE
Q psy477 19 DPEDIIHCLSQYGFMGKTLLTR 40 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~vv~~r 40 (60)
|++++++.|-+.||++-++.--
T Consensus 127 d~~~Ll~e~i~~G~~aiiv~v~ 148 (237)
T 3rjz_A 127 DAKEYMRELLNLGFKIMVVGVS 148 (237)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEEe
Confidence 7999999999999999987764
No 281
>2h7a_A Hypothetical protein YCGL; mixed alpha/beta/alpha sandwich structure, 3-layer (alpha/BE sandwich, beta-sheet layer antiparallel 3124 topology; NMR {Escherichia coli} SCOP: d.350.1.1
Probab=20.95 E-value=53 Score=19.38 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=15.6
Q ss_pred cCCHHHHHHHHhhCCceEE
Q psy477 17 ENDPEDIIHCLSQYGFMGK 35 (60)
Q Consensus 17 ~N~p~ei~~~~~~~G~~~~ 35 (60)
.-|+++|.+.+.++||--.
T Consensus 67 ~ad~~kV~~~L~eqGfyLQ 85 (110)
T 2h7a_A 67 NADIEKVKQALTEQGYYLQ 85 (110)
T ss_dssp SSCHHHHHHHHHHTSEEEE
T ss_pred hCCHHHHHHHHHhCCEEEE
Confidence 3479999999999998654
No 282
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=20.77 E-value=69 Score=15.28 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=14.9
Q ss_pred CHHHHHHHHhhCCceEEE
Q psy477 19 DPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 19 ~p~ei~~~~~~~G~~~~v 36 (60)
+++++.+.+...||.+..
T Consensus 53 ~~~~i~~~i~~~Gy~~~~ 70 (77)
T 1y3j_A 53 QPPMIAEFIRELGFGATV 70 (77)
T ss_dssp CHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHcCCceEE
Confidence 578899999999998764
No 283
>3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis}
Probab=20.20 E-value=1.4e+02 Score=19.29 Aligned_cols=39 Identities=13% Similarity=0.257 Sum_probs=27.3
Q ss_pred CCeEEEEEeccCCHHHHHHHHh--hCCceEEEEEEEeeCCeEE
Q psy477 7 KGILYLLVIKENDPEDIIHCLS--QYGFMGKTLLTRQVPGEKL 47 (60)
Q Consensus 7 ~G~~YLv~~~~N~p~ei~~~~~--~~G~~~~vv~~rk~~~E~L 47 (60)
.| -++++++..+.+++.+.++ +.|..+.+|.+- .+...+
T Consensus 250 ~g-~ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v-~~~~~v 290 (314)
T 3vti_C 250 EG-KVVVVVERDYAEKALEIMKSHEYGKDAEIIGEV-NDSKLV 290 (314)
T ss_dssp SS-CCEEEECGGGHHHHHHHHHTSTTCTTCEEEEEE-ESSSCE
T ss_pred CC-cEEEEECHHHHHHHHHHHhhCcCCCCeEEEEEE-CCCCeE
Confidence 45 3555666667899999999 678888888876 433333
No 284
>2y8l_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, serine/threonine-protein KI; HET: ADP AMP; 2.50A {Rattus norvegicus} PDB: 2y8q_A* 2ya3_A*
Probab=20.09 E-value=1.5e+02 Score=18.67 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=20.1
Q ss_pred EEEEEeccCCHHHHH----HHHhhCCceEEEEE
Q psy477 10 LYLLVIKENDPEDII----HCLSQYGFMGKTLL 38 (60)
Q Consensus 10 ~YLv~~~~N~p~ei~----~~~~~~G~~~~vv~ 38 (60)
-+|=+-+.++|.+|+ +.|+..|++.+++.
T Consensus 19 WhLGIrSrs~P~eIM~EVyRALk~Lg~eWK~i~ 51 (173)
T 2y8l_A 19 WHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVN 51 (173)
T ss_dssp EEESEEECSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeecccCCCHHHHHHHHHHHHHHcCCEEeeCC
Confidence 344456778898886 45567898888654
No 285
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=20.09 E-value=1.2e+02 Score=16.70 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=21.4
Q ss_pred ecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477 4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT 36 (60)
Q Consensus 4 Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v 36 (60)
|.++.++-+++-...-.+.|-+.+++.|+.+..
T Consensus 50 l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~ 82 (98)
T 1jdq_A 50 MKPGEILEVWIDYPMSKERIPETVKKLGHEVLE 82 (98)
T ss_dssp CCTTCEEEEEESSCTHHHHHHHHHHHSSCCEEE
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 455666555443332257888889999998754
Done!