Query psy4771
Match_columns 337
No_of_seqs 270 out of 2109
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 17:17:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.9 2.1E-26 7.3E-31 211.3 19.1 222 54-312 9-248 (322)
2 3sre_A PON1, serum paraoxonase 99.9 7.2E-24 2.5E-28 196.4 20.1 209 58-312 45-286 (355)
3 3dr2_A Exported gluconolactona 99.9 2E-22 6.7E-27 183.4 24.1 210 54-313 37-259 (305)
4 3g4e_A Regucalcin; six bladed 99.9 1.3E-21 4.4E-26 177.4 21.5 198 65-313 15-219 (297)
5 3e5z_A Putative gluconolactona 99.9 2.2E-20 7.4E-25 168.5 25.9 216 41-310 10-235 (296)
6 2p4o_A Hypothetical protein; p 99.9 5.7E-20 1.9E-24 167.4 25.6 183 63-313 32-232 (306)
7 3v64_C Agrin; beta propeller, 99.8 1.3E-19 4.6E-24 168.3 22.1 185 62-313 72-265 (349)
8 1npe_A Nidogen, entactin; glyc 99.8 4.6E-19 1.6E-23 157.9 20.7 185 62-313 35-228 (267)
9 1ijq_A LDL receptor, low-densi 99.8 9.9E-19 3.4E-23 160.2 23.2 186 62-313 29-228 (316)
10 1rwi_B Serine/threonine-protei 99.8 1.1E-18 3.7E-23 154.5 22.6 216 64-313 25-254 (270)
11 3v65_B Low-density lipoprotein 99.8 4.5E-19 1.5E-23 167.0 21.1 185 62-313 115-308 (386)
12 3sov_A LRP-6, low-density lipo 99.8 6E-19 2.1E-23 161.9 20.3 185 62-313 34-228 (318)
13 1q7f_A NHL, brain tumor CG1071 99.8 3.4E-18 1.2E-22 153.0 22.7 224 59-311 26-269 (286)
14 4a0p_A LRP6, LRP-6, low-densit 99.8 2E-18 6.9E-23 172.1 23.3 186 60-313 34-227 (628)
15 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 2.4E-18 8.1E-23 155.6 21.5 208 60-313 15-246 (314)
16 3hrp_A Uncharacterized protein 99.8 8.9E-18 3E-22 159.3 25.5 218 60-313 128-400 (409)
17 2ghs_A AGR_C_1268P; regucalcin 99.8 5.9E-18 2E-22 155.4 22.5 201 54-313 40-250 (326)
18 3p5b_L Low density lipoprotein 99.8 4.8E-18 1.6E-22 160.7 22.3 185 62-313 111-310 (400)
19 3fvz_A Peptidyl-glycine alpha- 99.8 1.3E-17 4.3E-22 153.2 24.2 163 62-277 23-226 (329)
20 4hw6_A Hypothetical protein, I 99.8 5.2E-18 1.8E-22 162.0 21.8 185 61-313 137-364 (433)
21 3dsm_A Uncharacterized protein 99.8 6.3E-18 2.1E-22 155.4 21.4 226 64-310 45-285 (328)
22 3s94_A LRP-6, low-density lipo 99.8 1E-17 3.5E-22 166.8 22.2 187 60-313 37-233 (619)
23 2qe8_A Uncharacterized protein 99.8 1.5E-17 5E-22 153.8 21.5 202 63-313 17-268 (343)
24 3s94_A LRP-6, low-density lipo 99.8 3.2E-17 1.1E-21 163.2 24.3 185 62-313 348-541 (619)
25 2qc5_A Streptogramin B lactona 99.8 2.2E-16 7.6E-21 141.1 25.9 215 61-312 18-249 (300)
26 3tc9_A Hypothetical hydrolase; 99.8 4.5E-17 1.5E-21 155.5 22.2 185 61-313 135-361 (430)
27 2qc5_A Streptogramin B lactona 99.8 4.1E-16 1.4E-20 139.4 26.6 213 62-311 61-290 (300)
28 2dg1_A DRP35, lactonase; beta 99.8 9.9E-17 3.4E-21 146.5 22.5 194 62-312 44-252 (333)
29 3m0c_C LDL receptor, low-densi 99.7 1.2E-16 4.2E-21 162.5 23.3 187 62-313 423-622 (791)
30 3hrp_A Uncharacterized protein 99.7 1.9E-16 6.3E-21 150.2 22.8 183 103-313 122-344 (409)
31 2z2n_A Virginiamycin B lyase; 99.7 1E-15 3.5E-20 136.7 26.2 216 61-313 13-245 (299)
32 4a0p_A LRP6, LRP-6, low-densit 99.7 1.6E-16 5.5E-21 158.3 22.5 192 62-313 339-539 (628)
33 1n7d_A LDL receptor, low-densi 99.7 1.1E-17 3.9E-22 168.7 12.5 188 62-313 405-604 (699)
34 1npe_A Nidogen, entactin; glyc 99.7 1E-15 3.5E-20 136.1 22.5 181 58-305 74-263 (267)
35 1q7f_A NHL, brain tumor CG1071 99.7 4.8E-16 1.7E-20 139.0 20.2 185 109-313 27-227 (286)
36 3fvz_A Peptidyl-glycine alpha- 99.7 4.8E-16 1.6E-20 142.6 19.3 212 59-279 87-323 (329)
37 2z2n_A Virginiamycin B lyase; 99.7 9E-15 3.1E-19 130.5 27.1 211 63-311 57-284 (299)
38 1ijq_A LDL receptor, low-densi 99.7 2.2E-15 7.6E-20 137.8 23.2 178 57-303 71-260 (316)
39 2ism_A Putative oxidoreductase 99.7 4.5E-15 1.5E-19 137.9 25.5 243 54-313 23-335 (352)
40 3v64_C Agrin; beta propeller, 99.7 1.7E-15 5.8E-20 140.6 22.2 178 57-303 110-297 (349)
41 3a9g_A Putative uncharacterize 99.7 1.5E-14 5.3E-19 134.4 27.8 245 54-312 21-331 (354)
42 3sov_A LRP-6, low-density lipo 99.7 3.1E-15 1.1E-19 137.1 21.7 179 57-303 73-260 (318)
43 3kya_A Putative phosphatase; s 99.7 2.2E-15 7.7E-20 144.8 21.0 192 59-313 135-400 (496)
44 1rwi_B Serine/threonine-protei 99.7 3.9E-15 1.3E-19 131.5 20.2 186 62-278 66-264 (270)
45 3v65_B Low-density lipoprotein 99.7 6.5E-15 2.2E-19 138.5 21.9 172 73-313 88-267 (386)
46 3tc9_A Hypothetical hydrolase; 99.7 3.4E-15 1.2E-19 142.5 20.2 185 62-277 178-429 (430)
47 2p9w_A MAL S 1 allergenic prot 99.7 2E-15 6.8E-20 137.1 16.6 206 60-313 10-255 (334)
48 2fp8_A Strictosidine synthase; 99.7 2.7E-15 9.1E-20 137.1 17.5 184 63-313 80-303 (322)
49 3p5b_L Low density lipoprotein 99.7 9E-15 3.1E-19 138.2 21.4 179 55-302 151-341 (400)
50 3vgz_A Uncharacterized protein 99.7 5E-14 1.7E-18 128.7 25.0 220 64-313 42-293 (353)
51 3m0c_C LDL receptor, low-densi 99.6 1.9E-14 6.5E-19 146.4 23.6 179 55-301 463-652 (791)
52 4hw6_A Hypothetical protein, I 99.6 1.5E-14 5E-19 138.1 20.2 186 61-277 180-432 (433)
53 3dsm_A Uncharacterized protein 99.6 2.4E-14 8.2E-19 131.4 19.4 185 63-279 84-303 (328)
54 2qe8_A Uncharacterized protein 99.6 1E-13 3.5E-18 127.9 20.0 215 60-313 64-311 (343)
55 3e5z_A Putative gluconolactona 99.6 3.2E-13 1.1E-17 121.4 22.8 182 63-279 69-287 (296)
56 3hfq_A Uncharacterized protein 99.6 5.6E-13 1.9E-17 122.1 24.4 228 62-313 39-307 (347)
57 3vgz_A Uncharacterized protein 99.6 1.2E-12 4.1E-17 119.5 25.9 222 64-313 90-335 (353)
58 3das_A Putative oxidoreductase 99.5 4.8E-12 1.7E-16 116.6 26.1 247 53-313 23-328 (347)
59 3g4e_A Regucalcin; six bladed 99.5 3.7E-13 1.3E-17 121.5 17.8 182 64-313 55-263 (297)
60 2p4o_A Hypothetical protein; p 99.5 6.7E-13 2.3E-17 120.4 19.6 189 64-313 73-279 (306)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.7E-13 2.6E-17 119.1 19.5 184 63-312 71-288 (314)
62 3dr2_A Exported gluconolactona 99.5 1.2E-12 4E-17 118.5 20.4 178 64-276 87-304 (305)
63 3kya_A Putative phosphatase; s 99.5 7.3E-13 2.5E-17 127.3 19.9 168 62-279 246-476 (496)
64 3hfq_A Uncharacterized protein 99.5 4.9E-12 1.7E-16 115.8 23.3 182 111-312 39-260 (347)
65 3u4y_A Uncharacterized protein 99.5 1.5E-11 5.1E-16 111.5 25.0 208 71-312 8-241 (331)
66 1n7d_A LDL receptor, low-densi 99.5 2.3E-13 7.7E-18 137.4 14.0 177 60-304 450-637 (699)
67 3u4y_A Uncharacterized protein 99.5 7.4E-12 2.5E-16 113.5 22.6 217 63-313 41-294 (331)
68 2g8s_A Glucose/sorbosone dehyd 99.5 5.3E-12 1.8E-16 117.2 21.6 248 54-311 10-341 (353)
69 2dg1_A DRP35, lactonase; beta 99.5 2.7E-12 9.4E-17 116.8 19.1 184 63-313 87-301 (333)
70 2iwa_A Glutamine cyclotransfer 99.5 4.6E-12 1.6E-16 112.5 19.4 155 63-278 66-237 (266)
71 2ism_A Putative oxidoreductase 99.4 2.8E-12 9.7E-17 118.9 16.1 157 111-314 30-224 (352)
72 3a9g_A Putative uncharacterize 99.4 6.2E-12 2.1E-16 116.8 16.0 158 110-313 27-218 (354)
73 3nol_A Glutamine cyclotransfer 99.4 5.1E-11 1.7E-15 104.8 20.4 153 65-277 89-255 (262)
74 3scy_A Hypothetical bacterial 99.4 2.2E-10 7.6E-15 105.4 25.0 224 62-312 49-326 (361)
75 2ghs_A AGR_C_1268P; regucalcin 99.4 4.3E-11 1.5E-15 109.5 19.9 180 64-313 91-293 (326)
76 3qqz_A Putative uncharacterize 99.4 2.1E-10 7.3E-15 101.1 23.2 197 59-310 23-241 (255)
77 3mbr_X Glutamine cyclotransfer 99.4 8.9E-11 3E-15 102.4 20.4 153 65-277 67-234 (243)
78 3nok_A Glutaminyl cyclase; bet 99.4 4.9E-11 1.7E-15 105.0 18.8 152 65-276 98-264 (268)
79 1jmx_B Amine dehydrogenase; ox 99.4 3.2E-10 1.1E-14 102.9 24.8 226 71-312 9-315 (349)
80 2iwa_A Glutamine cyclotransfer 99.3 2E-10 6.8E-15 101.9 22.2 183 63-313 21-227 (266)
81 3scy_A Hypothetical bacterial 99.3 3.1E-10 1.1E-14 104.4 23.9 181 112-312 50-279 (361)
82 1ri6_A Putative isomerase YBHE 99.3 8E-10 2.7E-14 99.9 25.8 218 64-312 39-297 (343)
83 3das_A Putative oxidoreductase 99.3 5.4E-11 1.8E-15 109.6 16.9 158 109-313 29-222 (347)
84 1ri6_A Putative isomerase YBHE 99.3 9.1E-10 3.1E-14 99.5 24.0 207 73-311 5-250 (343)
85 2g8s_A Glucose/sorbosone dehyd 99.3 2.1E-11 7.1E-16 113.2 12.8 160 111-313 17-218 (353)
86 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.2E-09 4.2E-14 101.0 24.3 178 112-312 40-275 (365)
87 3c75_H MADH, methylamine dehyd 99.3 1.9E-10 6.5E-15 109.0 18.4 223 71-311 83-390 (426)
88 1cru_A Protein (soluble quinop 99.3 8E-11 2.7E-15 112.8 15.9 169 110-313 25-248 (454)
89 3no2_A Uncharacterized protein 99.2 6.8E-10 2.3E-14 99.3 20.0 208 72-313 5-233 (276)
90 1l0q_A Surface layer protein; 99.2 1.7E-09 5.7E-14 100.2 23.4 180 64-311 33-219 (391)
91 1jof_A Carboxy-CIS,CIS-muconat 99.2 1.2E-09 4E-14 101.2 22.0 222 63-312 40-330 (365)
92 1nir_A Nitrite reductase; hemo 99.2 2.9E-09 9.9E-14 104.3 25.3 222 64-310 180-439 (543)
93 2oiz_A Aromatic amine dehydrog 99.2 1.8E-09 6E-14 100.3 21.9 224 63-305 51-360 (361)
94 1l0q_A Surface layer protein; 99.2 4.1E-09 1.4E-13 97.6 23.9 180 64-311 75-263 (391)
95 1pby_B Quinohemoprotein amine 99.2 5.4E-09 1.9E-13 94.1 24.0 229 64-312 35-300 (337)
96 1mda_H Methylamine dehydrogena 99.2 8.6E-10 2.9E-14 102.7 18.6 240 73-332 32-359 (368)
97 3nok_A Glutaminyl cyclase; bet 99.2 4.5E-09 1.6E-13 92.5 21.7 172 66-310 58-253 (268)
98 1cru_A Protein (soluble quinop 99.2 8.2E-10 2.8E-14 105.8 18.3 176 54-269 19-249 (454)
99 3sjl_D Methylamine dehydrogena 99.2 1.1E-09 3.8E-14 102.2 18.2 221 64-313 80-353 (386)
100 1fwx_A Nitrous oxide reductase 99.2 1.1E-09 3.7E-14 106.7 18.4 192 72-313 101-351 (595)
101 2ece_A 462AA long hypothetical 99.2 5.5E-09 1.9E-13 98.6 22.2 195 63-310 138-399 (462)
102 3nol_A Glutamine cyclotransfer 99.2 5.9E-09 2E-13 91.7 20.7 175 66-310 46-243 (262)
103 2p9w_A MAL S 1 allergenic prot 99.1 1E-09 3.5E-14 99.6 15.7 162 111-313 12-205 (334)
104 3mbr_X Glutamine cyclotransfer 99.1 1.3E-08 4.3E-13 88.8 21.5 184 65-321 23-230 (243)
105 3bws_A Protein LP49; two-domai 99.1 7.1E-09 2.4E-13 97.3 21.2 187 66-312 173-365 (433)
106 3hxj_A Pyrrolo-quinoline quino 99.1 5.3E-08 1.8E-12 87.8 24.6 204 70-313 105-315 (330)
107 2ece_A 462AA long hypothetical 99.1 1.5E-08 5.3E-13 95.6 21.4 204 71-313 94-342 (462)
108 1nir_A Nitrite reductase; hemo 99.1 1.4E-08 4.7E-13 99.5 22.0 176 71-312 147-344 (543)
109 3c75_H MADH, methylamine dehyd 99.1 3.9E-09 1.3E-13 100.0 16.9 202 64-279 120-403 (426)
110 3bws_A Protein LP49; two-domai 99.1 2.5E-08 8.7E-13 93.4 22.6 179 64-310 213-419 (433)
111 1qks_A Cytochrome CD1 nitrite 99.1 5E-08 1.7E-12 95.9 25.4 223 64-311 198-459 (567)
112 2mad_H Methylamine dehydrogena 99.1 5.8E-08 2E-12 90.5 24.7 210 63-310 67-337 (373)
113 1mda_H Methylamine dehydrogena 99.1 3.7E-09 1.3E-13 98.4 16.4 95 197-303 269-367 (368)
114 2oiz_A Aromatic amine dehydrog 99.1 2E-08 6.8E-13 93.1 21.3 221 72-311 15-324 (361)
115 1pby_B Quinohemoprotein amine 99.0 1.3E-08 4.4E-13 91.6 18.7 156 74-278 3-163 (337)
116 3sre_A PON1, serum paraoxonase 99.0 1.8E-08 6.2E-13 93.0 19.6 185 63-312 112-347 (355)
117 1jmx_B Amine dehydrogenase; ox 99.0 6.9E-09 2.4E-13 94.0 15.9 142 115-310 3-165 (349)
118 3v9f_A Two-component system se 99.0 7.1E-08 2.4E-12 98.3 22.1 215 67-313 367-603 (781)
119 4a2l_A BT_4663, two-component 99.0 1.2E-07 4.2E-12 96.7 23.8 216 67-313 410-651 (795)
120 3no2_A Uncharacterized protein 98.9 1.6E-07 5.3E-12 83.8 21.4 174 64-266 38-231 (276)
121 3qqz_A Putative uncharacterize 98.9 9.9E-08 3.4E-12 84.0 19.6 164 60-277 67-252 (255)
122 1fwx_A Nitrous oxide reductase 98.9 2.1E-08 7.2E-13 97.7 16.7 210 63-306 134-457 (595)
123 4a2l_A BT_4663, two-component 98.9 1.4E-07 4.7E-12 96.4 23.4 217 67-313 361-606 (795)
124 3sjl_D Methylamine dehydrogena 98.9 9E-08 3.1E-12 89.3 17.5 145 71-271 43-212 (386)
125 3v9f_A Two-component system se 98.9 3.1E-07 1.1E-11 93.5 22.5 183 66-313 453-648 (781)
126 1qks_A Cytochrome CD1 nitrite 98.8 1.5E-07 5.2E-12 92.5 19.1 176 72-313 166-363 (567)
127 3q6k_A 43.2 kDa salivary prote 98.8 2.2E-07 7.7E-12 86.2 18.4 196 64-313 27-296 (381)
128 4a9v_A PHOX; hydrolase, beta-p 98.8 4.6E-08 1.6E-12 94.5 13.5 78 189-269 473-553 (592)
129 2mad_H Methylamine dehydrogena 98.7 5.9E-06 2E-10 76.8 24.9 211 64-300 126-369 (373)
130 3hxj_A Pyrrolo-quinoline quino 98.7 7.8E-07 2.7E-11 80.0 17.2 201 68-313 65-275 (330)
131 2ojh_A Uncharacterized protein 98.7 3.9E-06 1.3E-10 73.2 21.2 215 65-310 44-290 (297)
132 3q6k_A 43.2 kDa salivary prote 98.6 1.9E-05 6.7E-10 73.1 23.8 210 62-313 86-344 (381)
133 3ott_A Two-component system se 98.6 9.6E-06 3.3E-10 82.2 23.8 217 71-313 333-578 (758)
134 2hqs_A Protein TOLB; TOLB, PAL 98.6 1.5E-05 5.1E-10 75.0 22.9 137 112-305 223-366 (415)
135 1gxr_A ESG1, transducin-like e 98.5 3.1E-05 1.1E-09 69.0 22.6 177 66-310 145-324 (337)
136 2hqs_A Protein TOLB; TOLB, PAL 98.5 2.1E-05 7.3E-10 73.9 22.0 139 112-306 179-324 (415)
137 3zwl_B Eukaryotic translation 98.5 0.00019 6.5E-09 64.6 26.8 228 65-312 35-335 (369)
138 2aq5_A Coronin-1A; WD40 repeat 98.5 7.3E-05 2.5E-09 69.2 24.3 215 65-306 84-327 (402)
139 4aez_A CDC20, WD repeat-contai 98.4 0.00015 5E-09 67.3 26.1 148 112-311 218-368 (401)
140 2ojh_A Uncharacterized protein 98.4 2.1E-05 7.2E-10 68.4 19.2 147 112-310 42-191 (297)
141 2z3z_A Dipeptidyl aminopeptida 98.4 2.7E-05 9.2E-10 77.8 20.8 177 112-310 181-418 (706)
142 1gxr_A ESG1, transducin-like e 98.4 0.00013 4.4E-09 64.9 23.2 179 66-311 101-284 (337)
143 2wg3_C Hedgehog-interacting pr 98.4 5.4E-06 1.8E-10 79.3 14.6 180 54-266 6-242 (463)
144 3o4h_A Acylamino-acid-releasin 98.4 7.5E-06 2.6E-10 80.1 15.9 140 116-312 114-265 (582)
145 3ow8_A WD repeat-containing pr 98.4 0.00022 7.4E-09 64.3 24.5 180 66-311 84-267 (321)
146 3ott_A Two-component system se 98.3 1.4E-05 4.9E-10 80.9 17.8 178 67-313 67-252 (758)
147 1got_B GT-beta; complex (GTP-b 98.3 0.0002 7E-09 64.8 23.2 174 71-310 153-330 (340)
148 3ow8_A WD repeat-containing pr 98.3 0.00029 9.9E-09 63.5 23.7 179 67-311 127-309 (321)
149 3ei3_B DNA damage-binding prot 98.2 0.00014 4.8E-09 66.6 20.5 186 65-311 76-270 (383)
150 2ymu_A WD-40 repeat protein; u 98.2 0.00061 2.1E-08 65.8 26.0 207 66-310 307-526 (577)
151 4e54_B DNA damage-binding prot 98.2 0.0001 3.5E-09 69.3 19.6 184 67-310 124-314 (435)
152 3s25_A Hypothetical 7-bladed b 98.2 6.9E-05 2.3E-09 67.6 17.3 168 68-279 111-294 (302)
153 4a9v_A PHOX; hydrolase, beta-p 98.2 1.5E-05 5.3E-10 77.0 13.3 111 62-210 383-550 (592)
154 2wg3_C Hedgehog-interacting pr 98.2 1.5E-05 5.1E-10 76.2 13.3 167 111-311 13-242 (463)
155 1k8k_C P40, ARP2/3 complex 41 98.2 0.0003 1E-08 63.6 21.6 215 66-312 12-264 (372)
156 2ymu_A WD-40 repeat protein; u 98.2 0.00021 7.3E-09 69.1 21.5 176 65-310 388-567 (577)
157 4h5i_A Guanine nucleotide-exch 98.2 0.0015 5.2E-08 59.8 25.6 181 112-313 134-333 (365)
158 4h5i_A Guanine nucleotide-exch 98.2 0.00027 9.4E-09 64.9 20.5 182 66-278 137-343 (365)
159 2ecf_A Dipeptidyl peptidase IV 98.1 3.4E-05 1.2E-09 77.4 15.1 96 114-266 111-228 (741)
160 2vdu_B TRNA (guanine-N(7)-)-me 98.1 0.00019 6.4E-09 67.7 19.3 219 65-312 105-373 (450)
161 4g56_B MGC81050 protein; prote 98.1 0.00033 1.1E-08 64.1 20.1 214 66-311 98-331 (357)
162 3s25_A Hypothetical 7-bladed b 98.1 5.7E-05 1.9E-09 68.1 14.6 170 65-279 57-256 (302)
163 4gqb_B Methylosome protein 50; 98.1 0.00029 9.9E-09 64.4 19.6 183 67-278 132-331 (344)
164 2z3z_A Dipeptidyl aminopeptida 98.1 0.0001 3.6E-09 73.5 17.9 138 113-310 83-276 (706)
165 3frx_A Guanine nucleotide-bind 98.1 0.0014 4.9E-08 58.6 23.8 210 66-311 69-305 (319)
166 4ery_A WD repeat-containing pr 98.1 0.0015 5E-08 57.9 22.7 182 65-311 26-211 (312)
167 4gqb_B Methylosome protein 50; 98.0 0.00051 1.8E-08 62.7 19.9 177 66-305 86-270 (344)
168 1r5m_A SIR4-interacting protei 98.0 0.002 6.7E-08 59.0 23.7 218 65-311 111-349 (425)
169 3vl1_A 26S proteasome regulato 98.0 0.0043 1.5E-07 57.1 25.5 221 65-311 142-408 (420)
170 3jrp_A Fusion protein of prote 98.0 0.0026 8.9E-08 57.3 23.4 215 66-309 15-273 (379)
171 1erj_A Transcriptional repress 98.0 0.0018 6E-08 59.9 22.6 148 67-278 128-287 (393)
172 3pe7_A Oligogalacturonate lyas 98.0 0.00091 3.1E-08 61.1 19.9 155 116-310 85-257 (388)
173 2pbi_B Guanine nucleotide-bind 98.0 0.0027 9.4E-08 57.8 23.0 178 67-310 159-344 (354)
174 4ery_A WD repeat-containing pr 97.9 0.0081 2.8E-07 53.0 25.5 212 65-310 68-297 (312)
175 3pe7_A Oligogalacturonate lyas 97.9 8.2E-05 2.8E-09 68.2 12.5 150 72-279 92-274 (388)
176 3k26_A Polycomb protein EED; W 97.9 0.0026 8.9E-08 57.0 22.3 208 74-311 87-354 (366)
177 3amr_A 3-phytase; beta-propell 97.9 0.00073 2.5E-08 61.7 18.3 67 246-313 179-253 (355)
178 3azo_A Aminopeptidase; POP fam 97.9 0.00017 5.8E-09 71.4 15.4 181 72-310 90-311 (662)
179 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.0017 5.8E-08 58.8 20.8 183 67-310 21-212 (345)
180 3o4h_A Acylamino-acid-releasin 97.9 7.7E-05 2.6E-09 72.9 12.3 133 115-311 153-300 (582)
181 2ecf_A Dipeptidyl peptidase IV 97.9 0.00042 1.4E-08 69.4 17.9 163 112-311 37-228 (741)
182 4aez_A CDC20, WD repeat-contai 97.9 0.0063 2.1E-07 56.1 24.3 206 68-310 99-321 (401)
183 3lrv_A PRE-mRNA-splicing facto 97.9 0.0033 1.1E-07 56.6 21.8 143 113-311 127-279 (343)
184 1sq9_A Antiviral protein SKI8; 97.9 0.0035 1.2E-07 57.1 22.0 216 66-311 20-310 (397)
185 1r5m_A SIR4-interacting protei 97.8 0.00058 2E-08 62.6 16.6 182 65-310 209-412 (425)
186 3azo_A Aminopeptidase; POP fam 97.8 0.0003 1E-08 69.6 15.2 112 194-310 132-259 (662)
187 3iz6_a 40S ribosomal protein R 97.8 0.0092 3.2E-07 54.7 24.5 179 72-311 170-363 (380)
188 2xyi_A Probable histone-bindin 97.8 0.002 6.8E-08 60.3 20.2 188 65-312 184-399 (430)
189 3sfz_A APAF-1, apoptotic pepti 97.8 0.00065 2.2E-08 72.2 18.7 208 66-310 1007-1236(1249)
190 3mkq_A Coatomer beta'-subunit; 97.8 0.0024 8.4E-08 64.3 22.1 213 64-310 15-246 (814)
191 3iz6_a 40S ribosomal protein R 97.8 0.0031 1.1E-07 57.9 20.7 149 74-278 220-375 (380)
192 1sq9_A Antiviral protein SKI8; 97.8 0.0018 6.3E-08 59.0 19.0 169 64-278 188-395 (397)
193 1erj_A Transcriptional repress 97.8 0.0037 1.3E-07 57.7 21.1 142 114-311 126-275 (393)
194 1xfd_A DIP, dipeptidyl aminope 97.8 0.00026 8.9E-09 70.7 14.1 138 66-265 20-191 (723)
195 3vl1_A 26S proteasome regulato 97.8 0.0018 6.1E-08 59.7 18.9 174 72-310 109-309 (420)
196 2pm9_A Protein WEB1, protein t 97.8 0.0012 4.1E-08 60.7 17.6 186 65-310 70-281 (416)
197 4g56_B MGC81050 protein; prote 97.8 0.0011 3.8E-08 60.6 17.2 183 66-277 143-342 (357)
198 2aq5_A Coronin-1A; WD40 repeat 97.8 0.0038 1.3E-07 57.5 21.0 217 63-308 35-283 (402)
199 1got_B GT-beta; complex (GTP-b 97.7 0.011 3.9E-07 53.1 23.2 182 65-311 58-245 (340)
200 2xyi_A Probable histone-bindin 97.7 0.0031 1.1E-07 59.0 19.1 190 64-311 130-341 (430)
201 1vyh_C Platelet-activating fac 97.7 0.0081 2.8E-07 55.8 21.8 179 66-310 154-356 (410)
202 3mkq_A Coatomer beta'-subunit; 97.7 0.0093 3.2E-07 60.0 23.6 182 66-278 59-259 (814)
203 3odt_A Protein DOA1; ubiquitin 97.7 0.0033 1.1E-07 55.0 18.0 142 72-279 155-297 (313)
204 2xzm_R RACK1; ribosome, transl 97.7 0.018 6.2E-07 51.7 23.3 191 66-310 80-273 (343)
205 1k32_A Tricorn protease; prote 97.7 0.0034 1.2E-07 65.8 20.8 111 112-266 379-491 (1045)
206 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0022 7.5E-08 58.7 17.2 177 70-313 186-369 (376)
207 1k32_A Tricorn protease; prote 97.7 0.0011 3.8E-08 69.5 17.0 139 113-311 339-491 (1045)
208 2ynn_A Coatomer subunit beta'; 97.7 0.0063 2.2E-07 53.9 19.8 151 65-277 16-171 (304)
209 3zwl_B Eukaryotic translation 97.7 0.0073 2.5E-07 54.0 20.4 162 65-278 178-346 (369)
210 3zwu_A Alkaline phosphatase PH 97.6 0.00056 1.9E-08 67.0 13.6 75 190-266 474-550 (592)
211 3sfz_A APAF-1, apoptotic pepti 97.6 0.0085 2.9E-07 63.6 23.9 210 66-310 619-858 (1249)
212 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.0039 1.3E-07 58.5 18.9 143 113-311 104-259 (450)
213 3dw8_B Serine/threonine-protei 97.6 0.02 6.7E-07 53.0 23.5 69 193-277 228-314 (447)
214 1vyh_C Platelet-activating fac 97.6 0.012 4E-07 54.7 21.9 178 67-310 197-398 (410)
215 3odt_A Protein DOA1; ubiquitin 97.6 0.015 5.2E-07 50.7 21.5 177 66-313 108-287 (313)
216 3frx_A Guanine nucleotide-bind 97.6 0.023 7.7E-07 50.6 22.7 181 66-311 21-215 (319)
217 3dwl_C Actin-related protein 2 97.6 0.00039 1.4E-08 63.3 11.0 177 73-310 24-223 (377)
218 1tl2_A L10, protein (tachylect 97.6 0.0027 9.2E-08 54.1 15.1 94 31-139 14-114 (236)
219 1xfd_A DIP, dipeptidyl aminope 97.6 0.0062 2.1E-07 60.6 20.6 156 114-313 257-430 (723)
220 3f3f_A Nucleoporin SEH1; struc 97.6 0.033 1.1E-06 48.8 25.1 187 64-278 13-249 (351)
221 3i2n_A WD repeat-containing pr 97.6 0.0028 9.5E-08 56.7 16.4 177 72-308 129-337 (357)
222 3dw8_B Serine/threonine-protei 97.6 0.011 3.6E-07 54.8 20.9 168 64-278 179-373 (447)
223 3mmy_A MRNA export factor; mRN 97.5 0.015 5.1E-07 51.8 20.9 94 64-174 41-144 (368)
224 1z68_A Fibroblast activation p 97.5 0.00052 1.8E-08 68.6 12.0 128 71-265 25-187 (719)
225 3jro_A Fusion protein of prote 97.5 0.013 4.5E-07 59.1 22.3 210 72-310 21-272 (753)
226 2pm7_B Protein transport prote 97.5 0.02 6.7E-07 50.4 21.0 230 67-311 14-273 (297)
227 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.0062 2.1E-07 55.6 18.0 77 69-148 50-129 (376)
228 2pm9_A Protein WEB1, protein t 97.5 0.0064 2.2E-07 55.6 18.1 193 65-311 116-325 (416)
229 2xzm_R RACK1; ribosome, transl 97.5 0.03 1E-06 50.3 22.2 101 193-309 215-326 (343)
230 3ei3_B DNA damage-binding prot 97.5 0.0083 2.8E-07 54.6 18.6 151 66-278 122-282 (383)
231 2pbi_B Guanine nucleotide-bind 97.5 0.0083 2.8E-07 54.5 18.5 141 73-274 211-353 (354)
232 3dm0_A Maltose-binding peripla 97.5 0.015 5.2E-07 57.8 21.7 184 66-313 434-623 (694)
233 1pgu_A Actin interacting prote 97.5 0.008 2.7E-07 58.0 19.2 185 65-310 21-225 (615)
234 4a11_B DNA excision repair pro 97.5 0.012 4E-07 53.5 19.3 159 66-278 47-218 (408)
235 3amr_A 3-phytase; beta-propell 97.5 0.0023 7.8E-08 58.4 14.0 83 228-313 102-201 (355)
236 1nr0_A Actin interacting prote 97.4 0.023 8E-07 55.6 22.4 224 66-311 151-386 (611)
237 3i2n_A WD repeat-containing pr 97.4 0.0062 2.1E-07 54.3 16.9 173 73-305 81-272 (357)
238 1k8k_C P40, ARP2/3 complex 41 97.4 0.0064 2.2E-07 54.7 17.1 146 113-310 10-160 (372)
239 4a5s_A Dipeptidyl peptidase 4 97.4 0.034 1.2E-06 55.8 24.0 194 71-280 26-296 (740)
240 4aow_A Guanine nucleotide-bind 97.4 0.053 1.8E-06 47.8 22.9 102 193-310 217-324 (340)
241 3dwl_C Actin-related protein 2 97.4 0.0029 9.9E-08 57.4 14.5 185 65-313 58-272 (377)
242 1nr0_A Actin interacting prote 97.4 0.0056 1.9E-07 60.1 17.0 187 64-311 20-209 (611)
243 2ynn_A Coatomer subunit beta'; 97.4 0.065 2.2E-06 47.2 23.8 176 72-278 67-259 (304)
244 3jrp_A Fusion protein of prote 97.4 0.015 5.1E-07 52.2 18.6 179 66-277 59-286 (379)
245 3k26_A Polycomb protein EED; W 97.4 0.02 6.8E-07 51.0 19.2 145 73-278 35-192 (366)
246 1yfq_A Cell cycle arrest prote 97.4 0.0053 1.8E-07 54.6 15.2 178 66-310 15-212 (342)
247 1pgu_A Actin interacting prote 97.3 0.015 5.3E-07 56.0 19.1 101 192-310 489-601 (615)
248 3dm0_A Maltose-binding peripla 97.3 0.039 1.3E-06 54.8 22.3 173 74-311 397-580 (694)
249 3fm0_A Protein CIAO1; WDR39,SG 97.3 0.012 4.1E-07 53.1 16.7 144 113-308 18-166 (345)
250 2gop_A Trilobed protease; beta 97.3 0.018 6.1E-07 51.5 17.7 70 194-275 173-250 (347)
251 4gga_A P55CDC, cell division c 97.3 0.12 4.1E-06 47.7 25.7 84 225-311 299-383 (420)
252 2hes_X YDR267CP; beta-propelle 97.2 0.087 3E-06 47.0 22.1 152 67-277 19-183 (330)
253 4aow_A Guanine nucleotide-bind 97.2 0.039 1.3E-06 48.7 19.6 137 77-278 190-337 (340)
254 1tl2_A L10, protein (tachylect 97.2 0.003 1E-07 53.8 11.1 110 112-273 41-158 (236)
255 3lrv_A PRE-mRNA-splicing facto 97.2 0.045 1.5E-06 49.0 20.0 184 72-313 48-235 (343)
256 3c5m_A Oligogalacturonate lyas 97.2 0.023 7.9E-07 51.5 18.2 144 114-310 190-369 (396)
257 3v7d_B Cell division control p 97.2 0.048 1.7E-06 50.8 20.7 144 70-279 278-422 (464)
258 2oaj_A Protein SNI1; WD40 repe 97.2 0.016 5.6E-07 59.8 18.2 149 64-278 19-182 (902)
259 2gop_A Trilobed protease; beta 97.1 0.007 2.4E-07 54.2 13.7 99 194-310 61-187 (347)
260 1yfq_A Cell cycle arrest prote 97.1 0.013 4.5E-07 51.9 15.1 175 66-310 105-310 (342)
261 3zwu_A Alkaline phosphatase PH 97.1 0.0065 2.2E-07 59.5 13.7 88 62-149 383-526 (592)
262 3v7d_B Cell division control p 97.1 0.11 3.9E-06 48.2 21.7 72 67-147 127-198 (464)
263 1kb0_A Quinohemoprotein alcoho 97.0 0.044 1.5E-06 54.7 19.5 52 226-278 456-507 (677)
264 1z68_A Fibroblast activation p 97.0 0.0036 1.2E-07 62.4 11.1 118 114-279 18-140 (719)
265 2xdw_A Prolyl endopeptidase; a 97.0 0.06 2.1E-06 53.7 20.0 106 194-310 235-353 (710)
266 3bg1_A Protein SEC13 homolog; 97.0 0.12 4E-06 45.8 20.1 229 67-310 18-280 (316)
267 2j04_A TAU60, YPL007P, hypothe 97.0 0.089 3.1E-06 51.2 20.2 172 112-311 86-286 (588)
268 4a11_B DNA excision repair pro 97.0 0.15 5.1E-06 46.0 21.0 150 65-278 102-276 (408)
269 1yiq_A Quinohemoprotein alcoho 96.9 0.16 5.5E-06 50.7 22.1 84 226-313 454-538 (689)
270 4a5s_A Dipeptidyl peptidase 4 96.8 0.019 6.7E-07 57.6 15.1 122 114-279 19-142 (740)
271 2hes_X YDR267CP; beta-propelle 96.8 0.18 6.2E-06 44.8 20.2 152 66-278 62-230 (330)
272 2xdw_A Prolyl endopeptidase; a 96.8 0.017 5.8E-07 57.7 14.0 107 194-310 127-251 (710)
273 4e54_B DNA damage-binding prot 96.8 0.053 1.8E-06 50.5 16.5 149 66-278 168-327 (435)
274 2hz6_A Endoplasmic reticulum t 96.6 0.0016 5.4E-08 60.0 4.8 66 68-144 5-71 (369)
275 2ovr_B FBW7, F-BOX/WD repeat p 96.6 0.21 7E-06 46.3 19.3 53 226-278 381-442 (445)
276 3vu4_A KMHSV2; beta-propeller 96.6 0.4 1.4E-05 43.2 24.1 73 192-279 196-272 (355)
277 1kb0_A Quinohemoprotein alcoho 96.5 0.074 2.5E-06 53.0 16.5 79 70-149 75-155 (677)
278 3c5m_A Oligogalacturonate lyas 96.5 0.029 9.9E-07 50.8 12.6 123 114-279 240-385 (396)
279 3f3f_A Nucleoporin SEH1; struc 96.5 0.14 4.7E-06 44.7 16.5 70 65-143 60-145 (351)
280 2ad6_A Methanol dehydrogenase 96.4 0.76 2.6E-05 44.7 22.8 86 225-313 442-527 (571)
281 1kv9_A Type II quinohemoprotei 96.4 0.35 1.2E-05 48.1 20.7 52 226-278 437-488 (668)
282 2oaj_A Protein SNI1; WD40 repe 96.3 0.27 9.2E-06 50.7 19.6 154 66-278 62-242 (902)
283 1flg_A Protein (quinoprotein e 96.2 1 3.4E-05 44.0 23.5 84 225-313 464-549 (582)
284 1w6s_A Methanol dehydrogenase 96.2 1 3.6E-05 44.0 22.9 84 225-313 451-536 (599)
285 2ad6_A Methanol dehydrogenase 96.2 0.32 1.1E-05 47.4 18.6 78 70-148 60-141 (571)
286 3vu4_A KMHSV2; beta-propeller 96.1 0.74 2.5E-05 41.3 22.9 86 224-312 156-260 (355)
287 2ovr_B FBW7, F-BOX/WD repeat p 96.0 0.78 2.7E-05 42.3 19.7 207 64-310 201-425 (445)
288 4ggc_A P55CDC, cell division c 96.0 0.68 2.3E-05 40.0 23.6 82 226-310 220-302 (318)
289 1kv9_A Type II quinohemoprotei 96.0 0.3 1E-05 48.6 17.5 78 70-148 64-143 (668)
290 3mmy_A MRNA export factor; mRN 95.9 0.23 8E-06 43.8 15.3 71 193-278 88-160 (368)
291 3gre_A Serine/threonine-protei 95.9 0.17 5.8E-06 46.6 14.6 68 72-146 182-250 (437)
292 2bkl_A Prolyl endopeptidase; m 95.9 0.052 1.8E-06 54.0 11.5 100 194-305 123-239 (695)
293 2bkl_A Prolyl endopeptidase; m 95.8 0.39 1.3E-05 47.6 17.7 103 194-310 229-336 (695)
294 2oit_A Nucleoporin 214KDA; NH2 95.8 0.31 1.1E-05 45.6 16.1 113 112-277 150-277 (434)
295 3b7f_A Glycosyl hydrolase, BNR 95.7 0.91 3.1E-05 41.5 18.7 81 65-147 57-153 (394)
296 1w6s_A Methanol dehydrogenase 95.7 0.74 2.5E-05 45.1 18.6 79 70-148 60-147 (599)
297 1yiq_A Quinohemoprotein alcoho 95.7 0.55 1.9E-05 46.8 18.0 78 70-148 68-147 (689)
298 3b7f_A Glycosyl hydrolase, BNR 95.6 0.67 2.3E-05 42.4 17.2 76 72-147 128-214 (394)
299 2j04_A TAU60, YPL007P, hypothe 95.6 0.33 1.1E-05 47.2 15.4 148 65-274 132-295 (588)
300 2pm7_B Protein transport prote 95.5 0.77 2.6E-05 39.9 16.8 114 113-278 11-132 (297)
301 3jro_A Fusion protein of prote 95.5 0.22 7.6E-06 50.0 14.7 116 112-279 10-133 (753)
302 2j04_B YDR362CP, TAU91; beta p 95.4 0.12 4E-06 49.9 11.8 151 66-278 270-428 (524)
303 3sbq_A Nitrous-oxide reductase 95.3 1.6 5.5E-05 42.2 18.6 86 228-313 299-398 (638)
304 4gga_A P55CDC, cell division c 95.1 1.9 6.4E-05 39.4 22.6 145 68-278 111-261 (420)
305 3gre_A Serine/threonine-protei 95.1 0.54 1.9E-05 43.1 15.1 160 65-278 114-292 (437)
306 3iuj_A Prolyl endopeptidase; h 95.0 1.3 4.5E-05 43.9 18.4 67 199-278 287-359 (693)
307 3bg1_A Protein SEC13 homolog; 95.0 0.61 2.1E-05 41.0 14.5 115 112-278 14-136 (316)
308 1yr2_A Prolyl oligopeptidase; 94.9 0.29 9.8E-06 49.1 13.3 101 194-305 165-280 (741)
309 1yr2_A Prolyl oligopeptidase; 94.9 1.6 5.6E-05 43.5 18.7 104 194-310 270-380 (741)
310 1flg_A Protein (quinoprotein e 94.5 2.9 0.0001 40.6 18.9 75 70-148 66-143 (582)
311 2xbg_A YCF48-like protein; pho 94.5 2.5 8.5E-05 37.6 20.5 61 67-138 126-189 (327)
312 2j04_B YDR362CP, TAU91; beta p 94.2 0.72 2.5E-05 44.3 13.8 140 112-309 267-414 (524)
313 2oit_A Nucleoporin 214KDA; NH2 94.1 0.14 4.9E-06 47.9 8.4 70 193-277 151-222 (434)
314 1p22_A F-BOX/WD-repeat protein 93.7 1.8 6E-05 39.8 15.1 69 67-145 261-329 (435)
315 2xe4_A Oligopeptidase B; hydro 93.6 0.57 2E-05 47.1 12.2 101 193-305 175-283 (751)
316 4ggc_A P55CDC, cell division c 93.1 3.7 0.00013 35.1 20.0 66 72-147 36-104 (318)
317 3iuj_A Prolyl endopeptidase; h 92.5 1.1 3.9E-05 44.4 12.4 104 193-310 130-252 (693)
318 2xe4_A Oligopeptidase B; hydro 91.8 3.7 0.00013 41.1 15.4 75 195-279 224-305 (751)
319 2w18_A PALB2, fancn, partner a 91.7 7.5 0.00025 35.2 17.1 51 225-276 303-355 (356)
320 1p22_A F-BOX/WD-repeat protein 91.5 8 0.00027 35.3 18.5 69 67-146 138-207 (435)
321 4gq1_A NUP37; propeller, trans 91.0 8.7 0.0003 34.6 18.2 52 225-278 337-389 (393)
322 2xbg_A YCF48-like protein; pho 90.1 9.5 0.00033 33.6 21.0 99 194-311 124-223 (327)
323 1k3i_A Galactose oxidase precu 87.6 18 0.00062 35.3 16.2 82 115-242 246-329 (656)
324 3ii7_A Kelch-like protein 7; p 85.5 17 0.00057 31.3 15.6 65 202-278 200-272 (306)
325 2hz6_A Endoplasmic reticulum t 85.1 0.7 2.4E-05 42.0 4.2 14 226-239 182-195 (369)
326 4gq1_A NUP37; propeller, trans 82.9 26 0.00089 31.4 20.7 58 251-311 320-378 (393)
327 2be1_A Serine/threonine-protei 82.5 4.4 0.00015 36.6 8.2 18 72-89 10-27 (339)
328 2woz_A Kelch repeat and BTB do 81.6 25 0.00087 30.4 14.1 28 121-148 157-191 (318)
329 4asc_A Kelch repeat and BTB do 80.4 25 0.00085 30.4 12.5 28 121-148 147-181 (315)
330 2vpj_A Kelch-like protein 12; 79.2 29 0.00099 29.6 19.3 106 122-278 112-231 (301)
331 1k3i_A Galactose oxidase precu 78.4 17 0.00058 35.5 11.7 70 193-277 244-322 (656)
332 2w18_A PALB2, fancn, partner a 72.4 55 0.0019 29.5 20.0 151 116-310 183-344 (356)
333 2vpj_A Kelch-like protein 12; 72.3 44 0.0015 28.3 18.8 64 202-277 206-277 (301)
334 2xn4_A Kelch-like protein 2; s 70.0 50 0.0017 28.0 18.0 64 202-277 204-275 (302)
335 3ii7_A Kelch-like protein 7; p 69.7 52 0.0018 28.0 16.7 49 227-278 169-225 (306)
336 1xip_A Nucleoporin NUP159; bet 69.2 68 0.0023 29.2 14.9 127 64-263 89-230 (388)
337 1xip_A Nucleoporin NUP159; bet 64.9 82 0.0028 28.6 15.1 82 226-313 145-234 (388)
338 3sbq_A Nitrous-oxide reductase 62.9 87 0.003 30.4 12.0 107 192-313 323-455 (638)
339 1zgk_A Kelch-like ECH-associat 59.7 82 0.0028 26.8 15.8 65 202-278 168-240 (308)
340 2cn3_A Xyloglucanase, beta-1,4 59.1 1.4E+02 0.0049 29.4 13.7 59 193-266 24-92 (737)
341 2woz_A Kelch repeat and BTB do 57.9 89 0.0031 26.7 12.1 36 226-263 277-312 (318)
342 2zwa_A Leucine carboxyl methyl 57.5 1.5E+02 0.005 29.1 14.4 114 116-279 444-578 (695)
343 2xn4_A Kelch-like protein 2; s 56.1 92 0.0032 26.3 18.3 49 227-278 173-229 (302)
344 1zgk_A Kelch-like ECH-associat 54.7 1E+02 0.0034 26.3 16.8 64 202-277 215-286 (308)
345 4asc_A Kelch repeat and BTB do 47.9 1.3E+02 0.0044 25.6 16.8 67 201-278 147-221 (315)
346 2cn3_A Xyloglucanase, beta-1,4 42.8 2.6E+02 0.0087 27.6 13.4 36 112-147 23-60 (737)
347 2be1_A Serine/threonine-protei 42.8 1.2E+02 0.004 27.1 9.0 28 122-149 10-37 (339)
348 2uvk_A YJHT; unknown function, 41.6 1.7E+02 0.0059 25.2 14.7 47 227-276 168-224 (357)
349 3hx6_A Type 4 fimbrial biogene 41.4 1.4E+02 0.0049 28.6 9.7 53 226-279 222-285 (570)
350 1sqj_A OXG-RCBH, oligoxylogluc 32.0 3.9E+02 0.013 26.5 17.7 171 67-309 19-247 (789)
351 2zwa_A Leucine carboxyl methyl 25.2 4.8E+02 0.016 25.3 16.7 121 116-278 494-635 (695)
352 3elq_A Arylsulfate sulfotransf 21.1 5.5E+02 0.019 24.6 13.4 138 113-280 356-542 (571)
353 3a0f_A Xyloglucanase; beta-pro 20.8 6.1E+02 0.021 24.9 19.0 179 67-309 25-262 (763)
354 2uvk_A YJHT; unknown function, 20.6 4E+02 0.014 22.7 11.8 38 227-266 86-126 (357)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.94 E-value=2.1e-26 Score=211.28 Aligned_cols=222 Identities=34% Similarity=0.601 Sum_probs=166.1
Q ss_pred Ccee-ccCcccCccEEEe-eCCe-EEEEecCcEEEEEeCC--ceeEEEecCc-----cccCc---cccCccCCcceEEEC
Q psy4771 54 AEKL-FENEIHGPEAVVK-HKGD-LYMGVDGGHILKLSGG--KLVPVVKLGK-----DCYGF---KYEQQCGRPLGIKFD 120 (337)
Q Consensus 54 ~~~~-~~g~~~~P~~i~~-~~g~-ly~d~~~g~I~~~~~~--~~~~~~~~g~-----~~~~~---~~~~~~~~P~Gl~~d 120 (337)
.+++ ..|.+..|+++++ .++. +|++..+++|++++.. ....+..... .|.+. .....+.+|.||+++
T Consensus 9 ~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~ 88 (322)
T 2fp8_A 9 LKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYN 88 (322)
T ss_dssp -CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEE
T ss_pred cceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEc
Confidence 4444 3566789999999 5665 8899999999999873 3433322110 11110 011235689999999
Q ss_pred C-CCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEE
Q psy4771 121 K-NGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTV 199 (337)
Q Consensus 121 ~-~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~v 199 (337)
+ +|+|||+|..++++++|+++++++.+... ..+. ++..||++++
T Consensus 89 ~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~---~~~~--------------------------------~~~~p~~i~~ 133 (322)
T 2fp8_A 89 LQNNQLYIVDCYYHLSVVGSEGGHATQLATS---VDGV--------------------------------PFKWLYAVTV 133 (322)
T ss_dssp TTTTEEEEEETTTEEEEECTTCEECEEEESE---ETTE--------------------------------ECSCEEEEEE
T ss_pred CCCCcEEEEECCCCEEEEeCCCCEEEEeccc---CCCC--------------------------------cccccceEEE
Confidence 7 89999999888899999987777666541 1221 4678999999
Q ss_pred cC-CCcEEEEcCCCCc--cCceeee-eecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEE
Q psy4771 200 DS-DGMVYWSDSSTKY--KSGLFEG-LTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYY 275 (337)
Q Consensus 200 d~-~G~lyvtd~~~~~--~~~~~~~-~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~ 275 (337)
|+ +|++||+|....+ .+....+ .....|+|+++|+++++.+.+...+..|+||++++||++|||+++..++|++|+
T Consensus 134 d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 134 DQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp CTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 99 9999999986432 1110011 123458999999998988877788899999999999999999999999999999
Q ss_pred eeCCCCCceeeeecCCCCCCCceeECCCCCEEEEecC
Q psy4771 276 LKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 276 ~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
+++...++.+.+.+ +++ |+||++|++|++||+...
T Consensus 214 ~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 214 LEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp SSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEE
T ss_pred CCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecC
Confidence 98766667777775 678 999999999999999976
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.92 E-value=7.2e-24 Score=196.37 Aligned_cols=209 Identities=19% Similarity=0.235 Sum_probs=152.1
Q ss_pred ccCcccCccEEEe-eCCeEEEEe-------------cCcEEEEEeCC----ceeEEEecCccccCccccCccCCcceEEE
Q psy4771 58 FENEIHGPEAVVK-HKGDLYMGV-------------DGGHILKLSGG----KLVPVVKLGKDCYGFKYEQQCGRPLGIKF 119 (337)
Q Consensus 58 ~~g~~~~P~~i~~-~~g~ly~d~-------------~~g~I~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~ 119 (337)
.++...+||+|++ .+|.+|+++ .+|+|++++.. +.+.+...+.. + .....+|+||.+
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~----~-~~~~f~PhGi~~ 119 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNT----L-DISSFNPHGIST 119 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSS----C-CGGGCCEEEEEE
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCC----C-CcCceeeeeeEE
Confidence 3565679999999 789999665 68999999974 22332211210 0 122358999999
Q ss_pred CC--CC--cEEEEECCCc-----EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 120 DK--NG--ALHVADAYFG-----LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 120 d~--~G--~lyVad~~~g-----v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
.. +| +|||++...+ +++++++++....+.. ..+ .+
T Consensus 120 ~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~----~~g--------------------------------~~ 163 (355)
T 3sre_A 120 FIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKT----IRH--------------------------------KL 163 (355)
T ss_dssp EECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEE----ECC--------------------------------TT
T ss_pred EECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEec----ccc--------------------------------CC
Confidence 55 45 7999985532 8888887665544432 333 36
Q ss_pred CCCCccEEEcCCCcEEEEcCCCCccCcee----eeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC
Q psy4771 191 PQIPNSVTVDSDGMVYWSDSSTKYKSGLF----EGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 191 ~~~pn~v~vd~~G~lyvtd~~~~~~~~~~----~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~ 266 (337)
++.|||++++++|++|+++..... +..+ .....+.|+||++|+. +++++.+++.+|||||++||+++|||+|+
T Consensus 164 ~~~pND~~v~~~G~fyvt~~~~ft-d~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATNDHYFI-DPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp CSSEEEEEEEETTEEEEEESCSCS-SHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCCceEEEeCCCCEEecCCcEeC-CcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeC
Confidence 899999999999999999874311 1000 0112457899999984 67788899999999999999999999999
Q ss_pred CCCEEEEEEeeC-CCCCceeeeecCCCCCCCceeECC-CCCEEEEecC
Q psy4771 267 MSSRVHRYYLKG-PKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVC 312 (337)
Q Consensus 267 ~~~~I~~~~~~g-~~~~~~~~~~~~~~g~Pdgi~~d~-dG~l~va~~~ 312 (337)
..++|++|++++ +.++..++| . +++.|||+++|+ +|++|||...
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEEES
T ss_pred CCCeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEecC
Confidence 999999999974 345556666 3 678999999999 5999998753
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.91 E-value=2e-22 Score=183.39 Aligned_cols=210 Identities=17% Similarity=0.235 Sum_probs=154.9
Q ss_pred CceeccCcccCccEEEe-e-CC-eEEEEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEE
Q psy4771 54 AEKLFENEIHGPEAVVK-H-KG-DLYMGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVAD 129 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~-~g-~ly~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad 129 (337)
.+++.++.. -+|+.++ . ++ .+|++..+++|++++. ++...+. ...+.|+|+++|++|+||+++
T Consensus 37 ~~~l~~~~~-~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~------------~~~~~~~gl~~d~dG~l~v~~ 103 (305)
T 3dr2_A 37 LLTLYDQAT-WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLL------------DATAFTNGNAVDAQQRLVHCE 103 (305)
T ss_dssp CEEEECCCS-SEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEE------------ESCSCEEEEEECTTSCEEEEE
T ss_pred eEEEecCCc-CccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEe------------CCCCccceeeECCCCCEEEEE
Confidence 566666644 4677776 3 34 3559999999999987 3333332 123569999999999999998
Q ss_pred CC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEE
Q psy4771 130 AY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 208 (337)
Q Consensus 130 ~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvt 208 (337)
.. .+|.+++++ |+.+.+... ..+. .++.||+++++++|++|||
T Consensus 104 ~~~~~v~~~~~~-g~~~~~~~~---~~~~--------------------------------~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 104 HGRRAITRSDAD-GQAHLLVGR---YAGK--------------------------------RLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TTTTEEEEECTT-SCEEEEECE---ETTE--------------------------------ECSCCCCEEECTTSCEEEE
T ss_pred CCCCEEEEECCC-CCEEEEEec---cCCC--------------------------------ccCCCCCEEECCCCCEEEe
Confidence 65 469999987 667666541 2221 4678999999999999999
Q ss_pred cCCCCcc---CceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCC-----CEEEEEEeeCCC
Q psy4771 209 DSSTKYK---SGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMS-----SRVHRYYLKGPK 280 (337)
Q Consensus 209 d~~~~~~---~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~-----~~I~~~~~~g~~ 280 (337)
|+..... ++.........+.|+++|+++++++.+. ++..|+|+++++|++.|||+++.. ++|++|++++..
T Consensus 148 d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 148 DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 8743210 0000011123568999999888887777 888999999999999999999874 899999998654
Q ss_pred CCceeeeecCCCCCCCceeECCCCCEEEEecCC
Q psy4771 281 QGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 281 ~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+...+++.+...+.|+||++|++|++|++...+
T Consensus 227 l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g 259 (305)
T 3dr2_A 227 LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG 259 (305)
T ss_dssp EEEEEEEECCSSSCCCSEEECTTSCEEECCSSE
T ss_pred ccCCeEEEECCCCCCCeEEECCCCCEEEecCCc
Confidence 555567766556789999999999999998544
No 4
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.89 E-value=1.3e-21 Score=177.42 Aligned_cols=198 Identities=14% Similarity=0.131 Sum_probs=145.4
Q ss_pred ccEEEe--eCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCC
Q psy4771 65 PEAVVK--HKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTT 141 (337)
Q Consensus 65 P~~i~~--~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~ 141 (337)
+|+.++ +++.|| +|..+++|++++..+.... .+ .....|.+++++++|+|||+. ..+|+++|+++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~----------~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV----------TMDAPVSSVALRQSGGYVATI-GTKFCALNWKE 82 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE----------ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTT
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE----------eCCCceEEEEECCCCCEEEEE-CCeEEEEECCC
Confidence 444444 256666 9999999999997432111 11 122568999999999999997 57899999998
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
++++.+... ..+ .+...+|++++|++|++|+++...... ...
T Consensus 83 g~~~~~~~~---~~~--------------------------------~~~~~~~di~~d~dG~l~~~~~~~~~~---~~~ 124 (297)
T 3g4e_A 83 QSAVVLATV---DND--------------------------------KKNNRFNDGKVDPAGRYFAGTMAEETA---PAV 124 (297)
T ss_dssp TEEEEEEEC---CTT--------------------------------CSSEEEEEEEECTTSCEEEEEEECCSB---TTB
T ss_pred CcEEEEEec---CCC--------------------------------CCCCCCCCEEECCCCCEEEecCCcccc---ccc
Confidence 988877642 111 135678999999999999988643210 000
Q ss_pred eecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee--CCCCCceeeeecC--CCCCCCc
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLK--GPKQGKSEVFIDG--LPGLPDN 297 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~--g~~~~~~~~~~~~--~~g~Pdg 297 (337)
.....+.||+++++ ++...+...+..|||+++++|+++||++++..++|++|+++ ++...+.+++.+. .++.|+|
T Consensus 125 ~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 125 LERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp CCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred ccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 12346799999986 56666777888999999999999999999999999999985 2333344555541 2367999
Q ss_pred eeECCCCCEEEEecCC
Q psy4771 298 VKRDSKGNFLVSLVCP 313 (337)
Q Consensus 298 i~~d~dG~l~va~~~~ 313 (337)
|++|++|++||+.+..
T Consensus 204 ~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 204 MCIDAEGKLWVACYNG 219 (297)
T ss_dssp EEEBTTSCEEEEEETT
T ss_pred eEECCCCCEEEEEcCC
Confidence 9999999999998755
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.88 E-value=2.2e-20 Score=168.55 Aligned_cols=216 Identities=19% Similarity=0.261 Sum_probs=155.1
Q ss_pred CcCcchhccccccCceeccCcccCccEEEe-eCCe--EEEEecCcEEEEEeCCc-eeEEEecCccccCccccCccCCcce
Q psy4771 41 LEGKLALNEKLNNAEKLFENEIHGPEAVVK-HKGD--LYMGVDGGHILKLSGGK-LVPVVKLGKDCYGFKYEQQCGRPLG 116 (337)
Q Consensus 41 ~~~~~~~~~~l~~~~~~~~g~~~~P~~i~~-~~g~--ly~d~~~g~I~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~P~G 116 (337)
+...+..+.. .+.+.++ ...||++++ .++. +|++..+++|++++..+ ...+. .....|.+
T Consensus 10 ~~~~~~~~~~---~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~~~ 73 (296)
T 3e5z_A 10 FLDLFPAGAE---ARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEM------------HPSHHQNG 73 (296)
T ss_dssp GGGGSCTTCC---CEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEE------------SSCSSEEE
T ss_pred HHhhcCCCCc---EEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEE------------CCCCCcce
Confidence 3444444444 3445444 456899998 4443 55999999999999743 22221 22356999
Q ss_pred EEECCCCcEEEEECC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCc
Q psy4771 117 IKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPN 195 (337)
Q Consensus 117 l~~d~~G~lyVad~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn 195 (337)
++++++|+|||++.. .+|.++|+++|+.+.+... ..+ .....|+
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~---~~~--------------------------------~~~~~~~ 118 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADS---FEG--------------------------------KKLNSPN 118 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE---ETT--------------------------------EECCCCC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec---cCC--------------------------------CCCCCCC
Confidence 999999999999875 5699999988887766531 111 1356799
Q ss_pred cEEEcCCCcEEEEcCCCCc---cCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEE
Q psy4771 196 SVTVDSDGMVYWSDSSTKY---KSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVH 272 (337)
Q Consensus 196 ~v~vd~~G~lyvtd~~~~~---~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~ 272 (337)
++++|++|++|+||+.... ..+.........+.|++++++ ++...+...+..|+|+++++||+.+ ++++..++|+
T Consensus 119 ~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~ 196 (296)
T 3e5z_A 119 DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATH 196 (296)
T ss_dssp CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEE
T ss_pred CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEE
Confidence 9999999999999874210 000000011235689999998 7777777888999999999999877 9999999999
Q ss_pred EEEeeC-CCC-CceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 273 RYYLKG-PKQ-GKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 273 ~~~~~g-~~~-~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
+|++++ +.. ....++ ....+.|++|++|++|++||+.
T Consensus 197 ~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE
T ss_pred EEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc
Confidence 999962 333 334555 5455679999999999999999
No 6
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.87 E-value=5.7e-20 Score=167.40 Aligned_cols=183 Identities=20% Similarity=0.240 Sum_probs=140.2
Q ss_pred cCccEEEe-eCCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-Cc--EEE
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FG--LYK 136 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~g--v~~ 136 (337)
..|+++++ .++.|| ++..+++|+++++ ++...+.. ..+.|.||+++++|+|||++.. ++ |++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~------------~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT------------VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE------------CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe------------CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 47999999 677788 8889999999997 44333221 2256999999999999999954 23 889
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccC
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKS 216 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~ 216 (337)
+|..+++++.+... . ...+++++++.+++++|++|..
T Consensus 100 ~d~~~g~~~~~~~~----~----------------------------------~~~~~~g~~~~~~~~~~v~d~~----- 136 (306)
T 2p4o_A 100 LVKSDGTVETLLTL----P----------------------------------DAIFLNGITPLSDTQYLTADSY----- 136 (306)
T ss_dssp EECTTSCEEEEEEC----T----------------------------------TCSCEEEEEESSSSEEEEEETT-----
T ss_pred EcCCCCeEEEEEeC----C----------------------------------CccccCcccccCCCcEEEEECC-----
Confidence 99888888776541 1 2345788988888889999864
Q ss_pred ceeeeeecCCccEEEEcCCCCeeEEE-----------eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC-CCCCce
Q psy4771 217 GLFEGLTSGSGRLIQYNPKTKKNKVL-----------IANLHFANGVELSADESFVIVAETMSSRVHRYYLKG-PKQGKS 284 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~~~~~~~-----------~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g-~~~~~~ 284 (337)
.|+||++|+.+++.++. ...+..|||| ++|+++|||+++.+++|++|++++ +..+..
T Consensus 137 ---------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 137 ---------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp ---------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred ---------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 35899999876532221 1346789998 888999999999999999999985 345556
Q ss_pred eeeecCCCCCCCceeECCCCCEEEEecCC
Q psy4771 285 EVFIDGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 285 ~~~~~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+++.+. ..|+||++|++|++||+....
T Consensus 206 ~~~~~~--~~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 206 EIFVEQ--TNIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp EEEEES--CCCSSEEEBTTCCEEEECBTT
T ss_pred EEEecc--CCCCCeEECCCCCEEEEeCCC
Confidence 666652 469999999999999999765
No 7
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.84 E-value=1.3e-19 Score=168.33 Aligned_cols=185 Identities=15% Similarity=0.203 Sum_probs=140.6
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC-cE
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF-GL 134 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-gv 134 (337)
+..|.++++ .++.|| +|..+++|+|++... .+.+.. .....|.||++|+ .|+||++|... .|
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-----------~~~~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-----------TGLESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----------SSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-----------CCCCCccEEEEecCCCeEEEEcCCCCeE
Confidence 457999998 467787 999999999998732 222221 2346799999997 56999999864 49
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~ 213 (337)
.++++++...+.+.. ..+..|+++++|+ +|.||++|...
T Consensus 141 ~~~~~dG~~~~~l~~---------------------------------------~~l~~P~~iavdp~~g~ly~td~~~- 180 (349)
T 3v64_C 141 EVANLDGAHRKVLLW---------------------------------------QSLEKPRAIALHPMEGTIYWTDWGN- 180 (349)
T ss_dssp EEEETTSCSCEEEEC---------------------------------------TTCSCEEEEEEETTTTEEEEEECSS-
T ss_pred EEEcCCCCceEEEEe---------------------------------------CCCCCcceEEEecCcCeEEEeccCC-
Confidence 999988665555442 1366799999997 67899999863
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
.++|+++++++...+.+. .++..|+||++++++++||++|+..++|.+++++|. ..+.+.....
T Consensus 181 ------------~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~ 245 (349)
T 3v64_C 181 ------------TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGL 245 (349)
T ss_dssp ------------SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSC
T ss_pred ------------CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCC
Confidence 248999998865554443 468899999999988899999999999999999874 2344443223
Q ss_pred CCCCceeECCCCCEEEEecCC
Q psy4771 293 GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+.|+||+++ +|++|++.+..
T Consensus 246 ~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 246 PHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp SSEEEEEEE-TTEEEEEETTT
T ss_pred CCceEEEEE-CCEEEEecCCC
Confidence 569999995 67899998766
No 8
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.83 E-value=4.6e-19 Score=157.88 Aligned_cols=185 Identities=17% Similarity=0.220 Sum_probs=137.7
Q ss_pred ccCccEEEee--CCeEE-EEecCcEEEEEeCC-ce-eEEEecCccccCccccCccCCcceEEECCC-CcEEEEECCC-cE
Q psy4771 62 IHGPEAVVKH--KGDLY-MGVDGGHILKLSGG-KL-VPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYF-GL 134 (337)
Q Consensus 62 ~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~-gv 134 (337)
...|++++++ ++.|| ++..+++|++++.. +. ..+. ......|.||++|++ |+|||+|... .|
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-----------~~~~~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-----------RQDLGSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-----------CTTCCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-----------ECCCCCccEEEEEecCCeEEEEECCCCEE
Confidence 3578999993 67888 99999999999873 22 2221 123467999999986 6999999765 49
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~ 213 (337)
.+++.++...+.+... .+..|+++++|+ +|+||+++...
T Consensus 104 ~~~~~~g~~~~~~~~~---------------------------------------~~~~P~~i~vd~~~g~lyv~~~~~- 143 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDT---------------------------------------GLVNPRGIVTDPVRGNLYWTDWNR- 143 (267)
T ss_dssp EEEETTSCSCEEEECS---------------------------------------SCSSEEEEEEETTTTEEEEEECCS-
T ss_pred EEEEcCCCCEEEEEEC---------------------------------------CCCCccEEEEeeCCCEEEEEECCC-
Confidence 9999876554444320 246799999999 57899999752
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
..++|+++++++...+.+. .++..|+|+++++++++|||++...++|.++++++. ....+.+.+
T Consensus 144 -----------~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~- 208 (267)
T 1npe_A 144 -----------DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLEGL- 208 (267)
T ss_dssp -----------SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE---EEEEEEECC-
T ss_pred -----------CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC---ceEEEecCC-
Confidence 1348888887755444443 567899999999998899999999999999998753 233444433
Q ss_pred CCCCceeECCCCCEEEEecCC
Q psy4771 293 GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..|+||++| +|++||+....
T Consensus 209 ~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 209 QYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp CSEEEEEEE-TTEEEEEETTT
T ss_pred CCceEEEEe-CCEEEEEECCC
Confidence 469999998 68899999765
No 9
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.83 E-value=9.9e-19 Score=160.21 Aligned_cols=186 Identities=12% Similarity=0.202 Sum_probs=139.1
Q ss_pred ccCccEEEee--CCeEE-EEecCcEEEEEeCCc-----eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC
Q psy4771 62 IHGPEAVVKH--KGDLY-MGVDGGHILKLSGGK-----LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF 132 (337)
Q Consensus 62 ~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~ 132 (337)
+..|++++++ ++.|| +|..+++|++++..+ .... .+ ......|.||++|. .|+||++|...
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-~~---------~~~~~~p~glavd~~~~~ly~~d~~~ 98 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-VI---------SRDIQAPDGLAVDWIHSNIYWTDSVL 98 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE-EE---------CSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE-EE---------eCCCCCcCEEEEeecCCeEEEEECCC
Confidence 5579999983 67787 999999999998732 1111 11 12346799999996 56999999764
Q ss_pred -cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcC
Q psy4771 133 -GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDS 210 (337)
Q Consensus 133 -gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~ 210 (337)
.|.++++++...+.+... .+..|+++++|+ +|+||++|.
T Consensus 99 ~~I~~~~~~g~~~~~~~~~---------------------------------------~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 99 GTVSVADTKGVKRKTLFRE---------------------------------------NGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp TEEEEEETTSSSEEEEEEC---------------------------------------TTCCEEEEEEETTTTEEEEEEC
T ss_pred CEEEEEeCCCCceEEEEEC---------------------------------------CCCCcceEEeCCCCCEEEEEcc
Confidence 499999987666655431 356799999997 678999997
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
.. .++|+++++++...+.+. ..+..|+||++++++++||++|+..++|.+++++|. ..+++..
T Consensus 140 ~~-------------~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~ 203 (316)
T 1ijq_A 140 GT-------------PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILE 203 (316)
T ss_dssp SS-------------SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEE
T ss_pred CC-------------CCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEee
Confidence 52 248999998755444443 468899999999998899999999999999999864 3445543
Q ss_pred C--CCCCCCceeECCCCCEEEEecCC
Q psy4771 290 G--LPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 290 ~--~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
. ....|+||+++. |++|++.+..
T Consensus 204 ~~~~~~~P~giav~~-~~ly~~d~~~ 228 (316)
T 1ijq_A 204 DEKRLAHPFSLAVFE-DKVFWTDIIN 228 (316)
T ss_dssp CTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred cCCccCCcEEEEEEC-CEEEEEECCC
Confidence 2 234699999984 7899998765
No 10
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=1.1e-18 Score=154.55 Aligned_cols=216 Identities=21% Similarity=0.288 Sum_probs=153.7
Q ss_pred CccEEEe-eCCeEEE-E-ecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcC
Q psy4771 64 GPEAVVK-HKGDLYM-G-VDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~-~~g~ly~-d-~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~ 140 (337)
.|.++++ .+|.+|+ . ..+++|.+++.++..... +. ......|.+|+++++|+|||++...+|+++|++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~--------~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LP--------FNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CC--------CCSCCSCCCEEECTTCCEEEEETTTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Ee--------eCCcCCcceeEECCCCCEEEEcCCCEEEEEeCC
Confidence 8999999 6778886 6 677899999874432211 11 123357999999999999999974569999998
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccC------CCCCCCCccEEEcCCCcEEEEcC
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEID------GAKPQIPNSVTVDSDGMVYWSDS 210 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~------~~~~~~pn~v~vd~~G~lyvtd~ 210 (337)
++....+.. .+ ...|.+++++++|+++ ..+.|..++.... ...+..|++++++++|++|+++.
T Consensus 96 ~~~~~~~~~-----~~--~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 96 SNNQTVLPF-----DG--LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSCCEECCC-----CS--CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG
T ss_pred CceEeeeec-----CC--cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC
Confidence 766554421 11 1248899999999987 2346766642211 12345799999999999999986
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEE-eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL-IANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~-~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
. .++|+++|++++..... ..++..|++|+++++| .|||++...++|.+|+.++... .....
T Consensus 169 ~--------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~---~~~~~ 230 (270)
T 1rwi_B 169 D--------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS---TVLPF 230 (270)
T ss_dssp G--------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC---EECCC
T ss_pred C--------------CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc---eeecc
Confidence 5 24899999887654332 2345789999999999 6999999999999999765321 11111
Q ss_pred CCCCCCCceeECCCCCEEEEecCC
Q psy4771 290 GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 290 ~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.....|.+|++|++|++|++....
T Consensus 231 ~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCCCCceeEEECCCCCEEEEECCC
Confidence 111358999999999999998655
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.83 E-value=4.5e-19 Score=166.99 Aligned_cols=185 Identities=15% Similarity=0.203 Sum_probs=139.7
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeCC-c-eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC-cE
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSGG-K-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF-GL 134 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-gv 134 (337)
+..|+++++ .++.|| +|..+++|+|++.. + .+.+.. .....|.||++|+ .|+||++|... .|
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-----------~~~~~p~glavd~~~g~lY~~d~~~~~I 183 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-----------TGLESPGGLAVDWVHDKLYWTDSGTSRI 183 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-----------SSCSCCCCEEEETTTTEEEEEETTTTEE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-----------CCCCCccEEEEEeCCCeEEEEcCCCCeE
Confidence 457999998 367777 99999999999873 2 222221 2346799999996 56999999864 48
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~ 213 (337)
.++++++...+.+... .+..|++|++|+ +|.||++|...
T Consensus 184 ~~~~~dg~~~~~l~~~---------------------------------------~l~~P~giavdp~~g~ly~td~~~- 223 (386)
T 3v65_B 184 EVANLDGAHRKVLLWQ---------------------------------------SLEKPRAIALHPMEGTIYWTDWGN- 223 (386)
T ss_dssp EECBTTSCSCEEEECS---------------------------------------SCSCEEEEEEETTTTEEEEEECSS-
T ss_pred EEEeCCCCceEEeecC---------------------------------------CCCCCcEEEEEcCCCeEEEeccCC-
Confidence 8888886655555421 367799999997 56799999863
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
.++|+++++++...+.+. .++..|+||++++++++|||+|+..++|.+++++|. ..+.+.....
T Consensus 224 ------------~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~ 288 (386)
T 3v65_B 224 ------------TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGL 288 (386)
T ss_dssp ------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC---SCEEEECSSC
T ss_pred ------------CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC---eeEEEEECCC
Confidence 248999998865554444 568899999999988899999999999999998864 2334443223
Q ss_pred CCCCceeECCCCCEEEEecCC
Q psy4771 293 GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+.|+||+++ +|++|++.+..
T Consensus 289 ~~P~giav~-~~~ly~td~~~ 308 (386)
T 3v65_B 289 PHPFAITVF-EDSLYWTDWHT 308 (386)
T ss_dssp SSEEEEEEE-TTEEEEEETTT
T ss_pred CCceEEEEE-CCEEEEeeCCC
Confidence 569999995 56788888765
No 12
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.82 E-value=6e-19 Score=161.85 Aligned_cols=185 Identities=17% Similarity=0.211 Sum_probs=138.0
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeCC-ce--eEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC-c
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSGG-KL--VPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF-G 133 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~-~~--~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-g 133 (337)
+..|.++.+ .++.|| +|..+++|+|++.. +. ..+.. .....|.|+++|. .|+||++|... .
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-----------~~l~~p~glavd~~~g~ly~~d~~~~~ 102 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-----------SGLLSPDGLACDWLGEKLYWTDSETNR 102 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-----------ECCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-----------CCCCCccEEEEEcCCCeEEEEECCCCE
Confidence 346777777 367777 99999999999873 21 12211 2346799999996 57999999765 4
Q ss_pred EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCC
Q psy4771 134 LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 212 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~ 212 (337)
|.++++++...+.+... .+..|+++++|+ +|.||++|+..
T Consensus 103 I~~~~~dG~~~~~l~~~---------------------------------------~~~~P~giavdp~~g~ly~td~~~ 143 (318)
T 3sov_A 103 IEVSNLDGSLRKVLFWQ---------------------------------------ELDQPRAIALDPSSGFMYWTDWGE 143 (318)
T ss_dssp EEEEETTSCSCEEEECS---------------------------------------SCSSEEEEEEEGGGTEEEEEECSS
T ss_pred EEEEECCCCcEEEEEeC---------------------------------------CCCCccEEEEeCCCCEEEEEecCC
Confidence 99999887655555421 366799999997 57899999752
Q ss_pred CccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCC
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGL 291 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~ 291 (337)
.++|+++++++...+.+. .++..||||++++++++||++|+..++|.+++++|. ..+++.+..
T Consensus 144 -------------~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~ 207 (318)
T 3sov_A 144 -------------VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGS 207 (318)
T ss_dssp -------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSC
T ss_pred -------------CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCC
Confidence 248999998765544443 568899999999988899999999999999999874 345555533
Q ss_pred CCCCCceeECCCCCEEEEecCC
Q psy4771 292 PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 292 ~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
-+.|+||+++.+ ++|++.+..
T Consensus 208 ~~~P~glav~~~-~lywtd~~~ 228 (318)
T 3sov_A 208 LPHPFALTLFED-ILYWTDWST 228 (318)
T ss_dssp CSCEEEEEEETT-EEEEEETTT
T ss_pred CCCceEEEEeCC-EEEEEecCC
Confidence 356999999854 577777654
No 13
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=3.4e-18 Score=153.04 Aligned_cols=224 Identities=15% Similarity=0.186 Sum_probs=154.7
Q ss_pred cCcccCccEEEe-eCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEE-CCCCcEEEEEC--CCc
Q psy4771 59 ENEIHGPEAVVK-HKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKF-DKNGALHVADA--YFG 133 (337)
Q Consensus 59 ~g~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~-d~~G~lyVad~--~~g 133 (337)
++.+..|.++++ .++.+| ++..+++|.+|+.... .+..++.... .......|.++++ +++|+|||++. ...
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~---~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGK---RDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSS---STTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCC---CcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 355678999999 678888 7788999999987321 2222322110 0123467999999 68899999995 356
Q ss_pred EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeecccc------C-CCCCCCCccEEEcCC
Q psy4771 134 LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEI------D-GAKPQIPNSVTVDSD 202 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~------~-~~~~~~pn~v~vd~~ 202 (337)
|.++|.++..+..+.. .. ...|.+++++++|+++ ..+.|..++... . ...+..|++++++++
T Consensus 102 i~~~d~~g~~~~~~~~----~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGA----TI---LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EEEECTTSCEEEEECT----TT---CSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS
T ss_pred EEEECCCCcEEEEecC----cc---CCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC
Confidence 9999976554444422 11 1248899999999987 234566665221 1 023567999999999
Q ss_pred CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--ccceeeEEEccCCCEEEEEeCCCC-EEEEEEeeCC
Q psy4771 203 GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--LHFANGVELSADESFVIVAETMSS-RVHRYYLKGP 279 (337)
Q Consensus 203 G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyva~~~~~-~I~~~~~~g~ 279 (337)
|++|+++.. +++|+++|+++.....+... +..|.+|+++++| .|||++...+ +|.+|+.++.
T Consensus 175 g~l~v~~~~--------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 175 QEIFISDNR--------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp SEEEEEEGG--------------GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSC
T ss_pred CCEEEEECC--------------CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCCC
Confidence 999999865 24888899865544444322 5789999999999 5999998886 9999986543
Q ss_pred CCCceeeeecCC-CCCCCceeECCCCCEEEEec
Q psy4771 280 KQGKSEVFIDGL-PGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 280 ~~~~~~~~~~~~-~g~Pdgi~~d~dG~l~va~~ 311 (337)
. ...+.... ...|.+++++++|++||+..
T Consensus 240 ~---~~~~~~~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 240 L---ISALESKVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp E---EEEEEESSCCSCEEEEEEETTTEEEEEET
T ss_pred E---EEEEcccCCCCcceeEEECCCCcEEEECC
Confidence 2 22232222 12478999999999999963
No 14
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.81 E-value=2e-18 Score=172.06 Aligned_cols=186 Identities=17% Similarity=0.213 Sum_probs=147.4
Q ss_pred CcccCccEEEe--eCCeEE-EEecCcEEEEEeC-C-ceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEECCCc
Q psy4771 60 NEIHGPEAVVK--HKGDLY-MGVDGGHILKLSG-G-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYFG 133 (337)
Q Consensus 60 g~~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~g 133 (337)
..+..|.+|++ .++.|| +|..+++|+|++. + ..+.+.. .....|.||++|.. |+||++|...+
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~-----------~g~~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE-----------FGLDYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----------SSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-----------CCCCCcceEEEEeCCCEEEEEECCCC
Confidence 34668999998 467888 9999999999986 3 2333321 22367999999976 59999998754
Q ss_pred -EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCC
Q psy4771 134 -LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 211 (337)
Q Consensus 134 -v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~ 211 (337)
|.+++++++..+.+... .+..|++|++|+ +|.|||||++
T Consensus 103 ~I~v~~~dG~~~~~l~~~---------------------------------------~l~~P~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 103 RIEVSKLDGQHRQVLVWK---------------------------------------DLDSPRALALDPAEGFMYWTEWG 143 (628)
T ss_dssp EEEEEETTSTTCEEEECS---------------------------------------SCCCEEEEEEETTTTEEEEEECS
T ss_pred EEEEEecCCCcEEEEEeC---------------------------------------CCCCcccEEEccCCCeEEEeCCC
Confidence 89999887665555421 466799999997 7899999975
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCC
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGL 291 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~ 291 (337)
. .++|+++++++...+.+..++..|+||++++++++||++|...++|.+++++|.. .+++.+.+
T Consensus 144 ~-------------~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~---~~v~~~~l 207 (628)
T 4a0p_A 144 G-------------KPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN---REVIADDL 207 (628)
T ss_dssp S-------------SCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECC
T ss_pred C-------------CCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc---eEEeeccC
Confidence 2 3489999998777777888999999999999988999999999999999998753 24556555
Q ss_pred CCCCCceeECCCCCEEEEecCC
Q psy4771 292 PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 292 ~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+ .|.||++++ +++|++.+..
T Consensus 208 ~-~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 208 P-HPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp S-CEEEEEEET-TEEEEEETTT
T ss_pred C-CceEEEEEC-CEEEEecCCC
Confidence 4 599999996 6899999755
No 15
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.81 E-value=2.4e-18 Score=155.58 Aligned_cols=208 Identities=25% Similarity=0.395 Sum_probs=147.3
Q ss_pred CcccCccEEEe-eCCeEE-E-------EecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC-CcEEE
Q psy4771 60 NEIHGPEAVVK-HKGDLY-M-------GVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHV 127 (337)
Q Consensus 60 g~~~~P~~i~~-~~g~ly-~-------d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyV 127 (337)
+.+..|+++++ .++.+| + +..+++|++++. ++...+.. .. .......|.+++++++ |+|||
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~------~~~~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PE------VNGYGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CE------ETTEECCEEEEEECSSSSEEEE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cc------cCCCCCCCceEEEecCCCcEEE
Confidence 34668999999 678888 5 578899999985 44433321 00 0112356999999999 99999
Q ss_pred EECCCcEEEEEcCCCeEEEE-eccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEE
Q psy4771 128 ADAYFGLYKVNVTTGQTEQL-ISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVY 206 (337)
Q Consensus 128 ad~~~gv~~vd~~~g~~~~l-~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~ly 206 (337)
++...+|+++|++ ++...+ ... ..+ .....|+++++|++|++|
T Consensus 88 ~~~~~~l~~~d~~-g~~~~~~~~~---~~~--------------------------------~~~~~~~~i~~d~~g~l~ 131 (314)
T 1pjx_A 88 ADMRLGLLVVQTD-GTFEEIAKKD---SEG--------------------------------RRMQGCNDCAFDYEGNLW 131 (314)
T ss_dssp EETTTEEEEEETT-SCEEECCSBC---TTS--------------------------------CBCBCCCEEEECTTSCEE
T ss_pred EECCCCEEEEeCC-CCEEEEEecc---CCC--------------------------------ccccCCcCEEECCCCCEE
Confidence 9976789999998 776655 421 111 134579999999999999
Q ss_pred EEcCCCCc--cCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEc----cCCCEEEEEeCCCCEEEEEEeeC-C
Q psy4771 207 WSDSSTKY--KSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELS----ADESFVIVAETMSSRVHRYYLKG-P 279 (337)
Q Consensus 207 vtd~~~~~--~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~----~dg~~lyva~~~~~~I~~~~~~g-~ 279 (337)
+++..... .+. ........+.|+++|++ ++...+...+..|++++++ +||+.||+++...++|++|++++ +
T Consensus 132 v~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g 209 (314)
T 1pjx_A 132 ITAPAGEVAPADY-TRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA 209 (314)
T ss_dssp EEECBCBCTTSCC-CBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT
T ss_pred EEecCcccccccc-cccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC
Confidence 99875310 000 00012234689999987 7776666677889999999 99988999999999999999862 2
Q ss_pred CCCceeeeecCCC----CCCCceeECCCCCEEEEecCC
Q psy4771 280 KQGKSEVFIDGLP----GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 280 ~~~~~~~~~~~~~----g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.......+.. .+ +.|++|++|++|++|++....
T Consensus 210 ~~~~~~~~~~-~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 210 KIENKKVWGH-IPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEEEEEEE-CCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred ccccceEEEE-CCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 2222333333 22 569999999999999997543
No 16
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.81 E-value=8.9e-18 Score=159.33 Aligned_cols=218 Identities=10% Similarity=0.090 Sum_probs=148.5
Q ss_pred CcccCccEEEe-eCCeEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCC--
Q psy4771 60 NEIHGPEAVVK-HKGDLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYF-- 132 (337)
Q Consensus 60 g~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~-- 132 (337)
..+..|.+|++ .++.|| ++..+++|.+++.. ....+.. ....|. ++++++| .||+++...
T Consensus 128 a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~------------~~~~~~-ia~~~~g~~l~~~d~~~~~ 194 (409)
T 3hrp_A 128 AKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP------------GFKGGK-PAVTKDKQRVYSIGWEGTH 194 (409)
T ss_dssp CCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE------------TCCBCB-CEECTTSSEEEEEBSSTTC
T ss_pred cccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec------------cCCCCc-eeEecCCCcEEEEecCCCc
Confidence 34678999999 678888 88888999999873 3433321 124577 9999998 689998643
Q ss_pred cEEEEEcCCCeE-EEEeccccccCCCCCCCCCceeeCC-CCCcc---cccceeeeccc-----------cCCCCCCCCc-
Q psy4771 133 GLYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDS-DGQTG---QTEQLISMDTE-----------IDGAKPQIPN- 195 (337)
Q Consensus 133 gv~~vd~~~g~~-~~l~~~~~~~~g~~~~~P~~v~~~~-~g~~~---~~~~v~~~~~~-----------~~~~~~~~pn- 195 (337)
.|++++++++.. ..+... ....+ ..|+++++++ +|+++ ..+.|..++.. ..+.....|.
T Consensus 195 ~I~~~d~~~~~~~~~~g~~-~~~~~---~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQL-GSTFS---GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEEEEGGGTTCEEEEEEC-CTTSC---SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred eEEEEEcCCCceeEEeeec-cchhc---CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 699999876654 233110 01011 2589999999 67776 22345554421 1111112244
Q ss_pred cEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc---------------ccceeeEEEccCCC
Q psy4771 196 SVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN---------------LHFANGVELSADES 259 (337)
Q Consensus 196 ~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~---------------~~~p~gia~~~dg~ 259 (337)
++++++ +|+||++|... ++|+++++++. ...+... +..|+||+++++|+
T Consensus 271 ~ia~~p~~g~lyv~d~~~--------------~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNL--------------SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp EEEEETTTTEEEEEETTT--------------TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred cEEEeCCCCEEEEEeCCC--------------CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 999999 58899999764 38888887643 4333321 57799999999996
Q ss_pred EEEEEeC-CCCEEEEEEeeCCCCCceeeeecC---------C-----CCCCCceeECCCCCEEEEecCC
Q psy4771 260 FVIVAET-MSSRVHRYYLKGPKQGKSEVFIDG---------L-----PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 260 ~lyva~~-~~~~I~~~~~~g~~~~~~~~~~~~---------~-----~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
|||+|+ .+++|.++++.++ ....++.. . -..|.||++|++|+||||....
T Consensus 336 -lyvad~~~~~~I~~~~~~~G---~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 336 -FYIVDGFKGYCLRKLDILDG---YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp -EEEEETTTTCEEEEEETTTT---EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred -EEEEeCCCCCEEEEEECCCC---EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 999999 9999999995322 22222221 0 1359999999999999999765
No 17
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.80 E-value=5.9e-18 Score=155.44 Aligned_cols=201 Identities=19% Similarity=0.182 Sum_probs=145.6
Q ss_pred CceeccCcccCccEEEe--eCCeEE-EEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECCCCcEEEE
Q psy4771 54 AEKLFENEIHGPEAVVK--HKGDLY-MGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVA 128 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVa 128 (337)
++.+.+....-+|+.++ +++.+| ++..+++|++++..+ ...+ .. ...+.+++++++|++||+
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~------------~~~v~~i~~~~dg~l~v~ 106 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH-AL------------PFMGSALAKISDSKQLIA 106 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-EC------------SSCEEEEEEEETTEEEEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-EC------------CCcceEEEEeCCCeEEEE
Confidence 45555544445667666 246665 999999999998732 2222 11 145889999999999999
Q ss_pred ECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEE
Q psy4771 129 DAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 208 (337)
Q Consensus 129 d~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvt 208 (337)
. ..+|+++|+++++++.+... ..+ .....++++++|++|++|++
T Consensus 107 ~-~~gl~~~d~~~g~~~~~~~~---~~~--------------------------------~~~~~~~~i~~d~~G~l~v~ 150 (326)
T 2ghs_A 107 S-DDGLFLRDTATGVLTLHAEL---ESD--------------------------------LPGNRSNDGRMHPSGALWIG 150 (326)
T ss_dssp E-TTEEEEEETTTCCEEEEECS---STT--------------------------------CTTEEEEEEEECTTSCEEEE
T ss_pred E-CCCEEEEECCCCcEEEEeeC---CCC--------------------------------CCCCCCCCEEECCCCCEEEE
Confidence 7 46799999988887766531 111 12456899999999999998
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee--CC-CCCcee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLK--GP-KQGKSE 285 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~--g~-~~~~~~ 285 (337)
+.... .....+.|++++ +++.+.+..+...|+++++++||+.||++++..++|++|+++ ++ .....+
T Consensus 151 ~~~~~--------~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~ 220 (326)
T 2ghs_A 151 TMGRK--------AETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE 220 (326)
T ss_dssp EEETT--------CCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE
T ss_pred eCCCc--------CCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCce
Confidence 75321 012356899999 477766666777899999999999999999999999999986 33 333444
Q ss_pred eeec--CCCCCCCceeECCCCCEEEEecCC
Q psy4771 286 VFID--GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 286 ~~~~--~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
++.. ...+.|+++++|++|++|++....
T Consensus 221 ~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 221 VFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp EEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred EEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 4443 234679999999999999998643
No 18
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.80 E-value=4.8e-18 Score=160.75 Aligned_cols=185 Identities=14% Similarity=0.229 Sum_probs=139.0
Q ss_pred ccCccEEEee--CCeEE-EEecCcEEEEEeCCc------eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECC
Q psy4771 62 IHGPEAVVKH--KGDLY-MGVDGGHILKLSGGK------LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAY 131 (337)
Q Consensus 62 ~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~ 131 (337)
+..|.+|+++ ++.|| +|..+++|++++... ...+. ......|.||++|. .++||++|..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-----------~~~~~~p~glavD~~~~~lY~~d~~ 179 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-----------SRDIQAPDGLAVDWIHSNIYWTDSV 179 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-----------CSSCSCEEEEEEETTTTEEEEEETT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-----------eCCCCCcccEEEEecCCceEEEECC
Confidence 4579999983 67787 999999999998732 11221 12456799999998 5799999987
Q ss_pred Cc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEc
Q psy4771 132 FG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSD 209 (337)
Q Consensus 132 ~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd 209 (337)
.+ |.+++++++..+.+... .+..|++|++|+ +|.||+||
T Consensus 180 ~~~I~~~~~~g~~~~~l~~~---------------------------------------~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 180 LGTVSVADTKGVKRKTLFRE---------------------------------------NGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp TTEEEEECTTTCSEEEEEEC---------------------------------------SSCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEeCCCCceEEEEeC---------------------------------------CCCCcceEEEecccCeEEEEe
Confidence 54 99999987766666531 356799999998 67899999
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI 288 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~ 288 (337)
+.. .++|+++++++...+.+. .++..|+||++++++++||++|+..++|.+++++|. ..+++.
T Consensus 221 ~~~-------------~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~ 284 (400)
T 3p5b_L 221 WGT-------------PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTIL 284 (400)
T ss_dssp CSS-------------SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEE
T ss_pred CCC-------------CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEE
Confidence 763 248999998865554443 568999999999988899999999999999999874 234444
Q ss_pred cC--CCCCCCceeECCCCCEEEEecCC
Q psy4771 289 DG--LPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 289 ~~--~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.. .-..|.||+++. +++|++.+..
T Consensus 285 ~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 285 EDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp ECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred eCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 32 124699999975 4677777654
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1.3e-17 Score=153.23 Aligned_cols=163 Identities=20% Similarity=0.256 Sum_probs=116.4
Q ss_pred ccCccEEEe-eCCeEE-EEecC------------------------cEEEEEeCCceeEEEecCccccCccccCccCCcc
Q psy4771 62 IHGPEAVVK-HKGDLY-MGVDG------------------------GHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPL 115 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly-~d~~~------------------------g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~ 115 (337)
+..|.+|++ .+|.+| ++..+ ++|++++..+...+..++. ..+..|.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------~~~~~p~ 94 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK--------NLFYLPH 94 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT--------TTCSSEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC--------CccCCce
Confidence 457899999 678898 66666 3689998743322333331 3456899
Q ss_pred eEEECCCCcEEEEECCC-cEEEEEcCCC--eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 116 GIKFDKNGALHVADAYF-GLYKVNVTTG--QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 116 Gl~~d~~G~lyVad~~~-gv~~vd~~~g--~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
||++|++|+|||+|... .|+++|+++. .+..+... ...|. ....+.
T Consensus 95 gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~--~~~g~-----------------------------~~~~~~ 143 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS--MQPGS-----------------------------DQNHFC 143 (329)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBT--TBCCC-----------------------------STTCCS
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc--CCCCC-----------------------------CccccC
Confidence 99999999999999864 4999998765 34444321 01110 011467
Q ss_pred CCccEEEcC-CCcEEEEcC-CCCccCceeeeeecCCccEEEEcCCCCeeEEEe----------ccccceeeEEEccCCCE
Q psy4771 193 IPNSVTVDS-DGMVYWSDS-STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI----------ANLHFANGVELSADESF 260 (337)
Q Consensus 193 ~pn~v~vd~-~G~lyvtd~-~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~----------~~~~~p~gia~~~dg~~ 260 (337)
.|++|++++ +|++|++|. .. ++|.++|+++.....+. ..+..|+||+++++++.
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~--------------~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~ 209 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCN--------------SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ 209 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSC--------------CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE
T ss_pred CCcEEEEeCCCCeEEEEeCCCC--------------CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE
Confidence 899999999 899999996 32 37888886544333332 23567999999999668
Q ss_pred EEEEeCCCCEEEEEEee
Q psy4771 261 VIVAETMSSRVHRYYLK 277 (337)
Q Consensus 261 lyva~~~~~~I~~~~~~ 277 (337)
|||++...++|.+|+.+
T Consensus 210 l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 210 LCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEECC
Confidence 99999999999999987
No 20
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.80 E-value=5.2e-18 Score=162.04 Aligned_cols=185 Identities=15% Similarity=0.157 Sum_probs=134.6
Q ss_pred cccCccEEEee----CCeEE-EEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-
Q psy4771 61 EIHGPEAVVKH----KGDLY-MGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF- 132 (337)
Q Consensus 61 ~~~~P~~i~~~----~g~ly-~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~- 132 (337)
.+..|.+|+++ ++.|| +|.. ++|++++. +.+..+. ....+|.||++|++|+|||+|...
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~------------~~~~~P~giavd~dG~lyVad~~~~ 203 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT------------TNIGQCADVNFTLNGDMVVVDDQSS 203 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC------------CCCSCEEEEEECTTCCEEEEECCSC
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee------------cCCCCccEEEECCCCCEEEEcCCCC
Confidence 56789999994 48899 6666 89999997 3333331 245679999999999999999632
Q ss_pred ----cEEEEEcCCCeEE--EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcE
Q psy4771 133 ----GLYKVNVTTGQTE--QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMV 205 (337)
Q Consensus 133 ----gv~~vd~~~g~~~--~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~l 205 (337)
+++.++..++... .+. .+..|+++++|+ +|+|
T Consensus 204 ~~~~gv~~~~~~~~~~~~~~~~-----------------------------------------~~~~P~giavd~~~G~l 242 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERLSLC-----------------------------------------NARGAKTCAVHPQNGKI 242 (433)
T ss_dssp TTSEEEEEECGGGTTCCEEEEE-----------------------------------------ECSSBCCCEECTTTCCE
T ss_pred cccceEEEEECCCCeecccccc-----------------------------------------ccCCCCEEEEeCCCCeE
Confidence 3666665433211 110 367799999999 8999
Q ss_pred EEEcCCCCccCceeeeeecCCccEEEEcCCCCee-EEEec--cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC--CC
Q psy4771 206 YWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN-KVLIA--NLHFANGVELSADESFVIVAETMSSRVHRYYLKG--PK 280 (337)
Q Consensus 206 yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~-~~~~~--~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g--~~ 280 (337)
||+|.. +++|+++|+++++. +.+.. ....+.+|+++++|++|||++..+++|+++++++ ..
T Consensus 243 yv~d~~--------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 243 YYTRYH--------------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK 308 (433)
T ss_dssp EECBTT--------------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred EEEECC--------------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence 999976 34899999987766 33322 2345678999999999999999999999999874 22
Q ss_pred CCceeeeecC--CC------------CCCCceeE---------CCCCCEEEEecCC
Q psy4771 281 QGKSEVFIDG--LP------------GLPDNVKR---------DSKGNFLVSLVCP 313 (337)
Q Consensus 281 ~~~~~~~~~~--~~------------g~Pdgi~~---------d~dG~l~va~~~~ 313 (337)
.....+++.. .. ..|.||++ |.+|+|||+....
T Consensus 309 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 309 LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 2333344331 11 23788999 9999999999766
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.80 E-value=6.3e-18 Score=155.41 Aligned_cols=226 Identities=12% Similarity=0.110 Sum_probs=153.8
Q ss_pred CccEEEeeCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEEEcCC
Q psy4771 64 GPEAVVKHKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVNVTT 141 (337)
Q Consensus 64 ~P~~i~~~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~ 141 (337)
.|+++++.++.+| +...+++|.++|..+.+.+..+ .....|.+|+++++|++||++.+ ..|.++|+++
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i----------~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI----------TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE----------ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc----------CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 5888988889999 6777789999998544433333 12366999999888999999944 5699999999
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcc--c---ccceeeeccccCC-----CCCCCCccEEEcCCCcEEEEcCC
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG--Q---TEQLISMDTEIDG-----AKPQIPNSVTVDSDGMVYWSDSS 211 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~---~~~v~~~~~~~~~-----~~~~~pn~v~vd~~G~lyvtd~~ 211 (337)
+++........ ..+ ....|+++++ .+++++ . .+.|..++..-.. .....|++++++++|++|+++..
T Consensus 115 ~~~~~~i~~g~-~~~-~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPD-MDM-ESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TEEEEEEECTT-CCT-TTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred CeEEEEEEcCC-ccc-cCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 88765443110 000 1124889999 456665 1 3456666522110 12356999999999999999876
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEec--cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA--NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
... + .......+.|+++|++++++..... ....|+++++++|+++||+++. .|++++.+..+... ..+..
T Consensus 192 ~~~-~---~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~ 263 (328)
T 3dsm_A 192 GYE-G---SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLE 263 (328)
T ss_dssp BCT-T---CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBC
T ss_pred Ccc-C---CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeec
Confidence 310 0 0000114689999999887653332 1347999999999999999986 89999986544322 12222
Q ss_pred CCCCCCCceeECC-CCCEEEEe
Q psy4771 290 GLPGLPDNVKRDS-KGNFLVSL 310 (337)
Q Consensus 290 ~~~g~Pdgi~~d~-dG~l~va~ 310 (337)
.....|+||++|+ +|++||+.
T Consensus 264 ~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 264 FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CCSSCEEEEEECTTTCCEEEEE
T ss_pred CCCCceEEEEEcCCCCeEEEEc
Confidence 1134699999998 78899998
No 22
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.78 E-value=1e-17 Score=166.76 Aligned_cols=187 Identities=18% Similarity=0.212 Sum_probs=138.4
Q ss_pred CcccCccEEEe--eCCeEE-EEecCcEEEEEeCCce---eEEEecCccccCccccCccCCcceEEECCC-CcEEEEECCC
Q psy4771 60 NEIHGPEAVVK--HKGDLY-MGVDGGHILKLSGGKL---VPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYF 132 (337)
Q Consensus 60 g~~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~ 132 (337)
..+..|.+|++ .++.|| +|..+++|+|++..+. ..+. ......|.||++|.. ++||++|...
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~-----------~~~~~~P~GlAvD~~~~~ly~~d~~~ 105 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-----------VSGLLSPDGLACDWLGEKLYWTDSET 105 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE-----------CSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE-----------eCCCCCcCeEEEEecCCEEEEEeCCC
Confidence 34567999988 478888 9999999999987322 2221 123467999999985 6999999775
Q ss_pred c-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEEEcC
Q psy4771 133 G-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDS 210 (337)
Q Consensus 133 g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyvtd~ 210 (337)
+ |.+++.++...+.+... .+..|++|++|+. |.|||||+
T Consensus 106 ~~I~v~~~dG~~~~~l~~~---------------------------------------~l~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 106 NRIEVSNLDGSLRKVLFWQ---------------------------------------ELDQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp TEEEEEETTSCSCEEEECS---------------------------------------SCSCCCCEEEETTTTEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeC---------------------------------------CCCCCceEEEecCCCeEEEecc
Confidence 5 88899987666665521 4677999999985 78999997
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
+. .++|++.++++...+.+. ..+..|+||+++++++.||++|...++|++++++|. ..+.+..
T Consensus 147 g~-------------~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~---~~~~~~~ 210 (619)
T 3s94_A 147 GE-------------VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVK 210 (619)
T ss_dssp SS-------------SCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC---EEC----
T ss_pred CC-------------CCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC---ccEEEEe
Confidence 62 248999988765555554 578899999999988899999999999999999874 2333333
Q ss_pred CCCCCCCceeECCCCCEEEEecCC
Q psy4771 290 GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 290 ~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..-..|.||+++++ ++|++.+..
T Consensus 211 ~~~~~P~gi~~~~~-~ly~td~~~ 233 (619)
T 3s94_A 211 GSLPHPFALTLFED-ILYWTDWST 233 (619)
T ss_dssp -----CCCEEESSS-EEEEECTTT
T ss_pred CCCCCceEEEEeCC-EEEEecCCC
Confidence 22246999999977 899998766
No 23
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.5e-17 Score=153.83 Aligned_cols=202 Identities=18% Similarity=0.213 Sum_probs=132.0
Q ss_pred cCccEEEe-eCCeEEEEec---Cc--EEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-----
Q psy4771 63 HGPEAVVK-HKGDLYMGVD---GG--HILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY----- 131 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly~d~~---~g--~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~----- 131 (337)
..|++|++ .+|.+|+... ++ +|++++.++.. .+..... ........|.|+++|++|+|||+|..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~---~~p~~~~--~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI---PFPPQSG--NAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE---ESCCCCS--SCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee---cCCCccc--CcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 57999999 5889995532 33 78888844332 2221000 01134578999999999999999975
Q ss_pred -CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEc
Q psy4771 132 -FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSD 209 (337)
Q Consensus 132 -~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd 209 (337)
..|+++|++++++......... .+ .....++++++|+ +|.+|++|
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~-~~--------------------------------~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPP-IT--------------------------------LSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTT-TS--------------------------------CTTCCCCEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCeEEEEEECChh-hc--------------------------------ccccccceEEEecCCCEEEEEc
Confidence 4699999988885443321000 00 1345789999997 47899999
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc------------------------------ccceeeEEEccCCC
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN------------------------------LHFANGVELSADES 259 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~------------------------------~~~p~gia~~~dg~ 259 (337)
.+.. ..+.|+++|+++++......+ ...++||++++||+
T Consensus 139 ~~~~-----------~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~ 207 (343)
T 2qe8_A 139 PAPD-----------DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE 207 (343)
T ss_dssp CCSG-----------GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC
T ss_pred CccC-----------CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC
Confidence 8421 122455555544443332211 12489999999999
Q ss_pred EEEEEeCCCCEEEEEEee---CCCCCceeeeec----CCCCCCCceeECCCCCEEEEecCC
Q psy4771 260 FVIVAETMSSRVHRYYLK---GPKQGKSEVFID----GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 260 ~lyva~~~~~~I~~~~~~---g~~~~~~~~~~~----~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+||+++..+++|++++.+ ....+..+++.. +..+.|+||++|++|++|++....
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCC
Confidence 999999999999999864 112222211110 123579999999999999999755
No 24
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.78 E-value=3.2e-17 Score=163.23 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=140.3
Q ss_pred ccCccEEEee--CCeEE-EEecCcEEEEEeC-Cc-eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-E
Q psy4771 62 IHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GK-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-L 134 (337)
Q Consensus 62 ~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v 134 (337)
+..|.+|+++ ++.|| +|..+++|+|++. ++ .+.+. ......|.||++|. .++||++|...+ |
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~-----------~~~~~~p~GlAvD~~~~~lY~tD~~~~~I 416 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV-----------TAQIAHPDGIAVDWVARNLYWTDTGTDRI 416 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----------CSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE-----------ECCCCCcCceEEecccCcEEEEeCCCCcE
Confidence 5578888883 67888 9999999999987 32 22332 13347899999996 569999998755 8
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~ 213 (337)
.+++.++...+.+.. ..+..|++|++|+ +|.|||||++.
T Consensus 417 ~v~~~~G~~~~~l~~---------------------------------------~~l~~P~~iavdp~~G~ly~tD~g~- 456 (619)
T 3s94_A 417 EVTRLNGTMRKILIS---------------------------------------EDLEEPRAIVLDPMVGYMYWTDWGE- 456 (619)
T ss_dssp EEEETTSCSCEEEEC---------------------------------------TTCCSEEEEEEETTTTEEEEEECSS-
T ss_pred EEEeCCCCeEEEEEE---------------------------------------CCCCCeeeEEEEcCCCcEEEecCCC-
Confidence 888887665555542 1467899999998 48999999863
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
.++|++.+.++...+.+. ..+..|+||++++++++|||+|+..++|.+++++|.. .+++....-
T Consensus 457 ------------~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~l 521 (619)
T 3s94_A 457 ------------IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG---RRVLVEDKI 521 (619)
T ss_dssp ------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CEEEEECCC
T ss_pred ------------CCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc---eEEEeccCC
Confidence 247888888755444444 4589999999999888999999999999999998753 233332223
Q ss_pred CCCCceeECCCCCEEEEecCC
Q psy4771 293 GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..|.||+++.+ ++|++.+..
T Consensus 522 ~~P~glav~~~-~ly~tD~~~ 541 (619)
T 3s94_A 522 PHIFGFTLLGD-YVYWTDWQR 541 (619)
T ss_dssp CSSCCEEEETT-EEEEECTTS
T ss_pred CCcEEEEEECC-EEEEeecCC
Confidence 45999999865 899999766
No 25
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=2.2e-16 Score=141.11 Aligned_cols=215 Identities=13% Similarity=0.167 Sum_probs=153.7
Q ss_pred cccCccEEEe-eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEE
Q psy4771 61 EIHGPEAVVK-HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYK 136 (337)
Q Consensus 61 ~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~ 136 (337)
....|.++++ .+|.+| ++..+++|.+++.. +...+. .. .....|.+|+++++|++||++.. .+|++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~-~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFE-VP---------TPDAKVMCLIVSSLGDIWFTENGANKIGK 87 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE-CS---------STTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEE-CC---------CCCCcceeEEECCCCCEEEEecCCCeEEE
Confidence 3568999999 678899 66678999999875 333221 11 22367999999999999999975 45999
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccC------CCCCCCCccEEEcCCCcEE
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEID------GAKPQIPNSVTVDSDGMVY 206 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~------~~~~~~pn~v~vd~~G~ly 206 (337)
+|++ ++...+..+ ..+ ..|.+++++++|+++ ..+.|..++.... ......|++++++++|++|
T Consensus 88 ~d~~-g~~~~~~~~---~~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 88 LSKK-GGFTEYPLP---QPD---SGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp ECTT-SCEEEEECS---STT---CCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred ECCC-CCeEEecCC---CCC---CCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEE
Confidence 9998 666554321 111 248999999999987 2346666653210 1135679999999999999
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCce
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKS 284 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~ 284 (337)
+++... +.|+++|+ +++..... .....|.+|+++++| .||+++...++|.+++.++. .
T Consensus 161 v~~~~~--------------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g~----~ 220 (300)
T 2qc5_A 161 FTENQN--------------NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTTGE----I 220 (300)
T ss_dssp EEETTT--------------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTTCC----E
T ss_pred EEecCC--------------CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCCCc----E
Confidence 998652 37899998 45554432 345689999999998 59999999899999987332 2
Q ss_pred eee-ecCCCCCCCceeECCCCCEEEEecC
Q psy4771 285 EVF-IDGLPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 285 ~~~-~~~~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
..+ .......|.+|++|++|++|++...
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred EEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 222 1111235899999999999999965
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=4.5e-17 Score=155.45 Aligned_cols=185 Identities=11% Similarity=0.140 Sum_probs=133.5
Q ss_pred cccCccEEEee---CCeEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCC-
Q psy4771 61 EIHGPEAVVKH---KGDLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYF- 132 (337)
Q Consensus 61 ~~~~P~~i~~~---~g~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~- 132 (337)
.+..|.+++++ ++.|| ++.. ++|.+++.. .+..+. ....+|.+|++|++|+ |||+|...
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~------------~~~~~P~~ia~d~~G~~lyvad~~~~ 201 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVY------------SGLSKVRTICWTHEADSMIITNDQNN 201 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEE------------CCCSCEEEEEECTTSSEEEEEECCSC
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEe------------cCCCCcceEEEeCCCCEEEEEeCCCC
Confidence 46689999995 47899 6666 999999973 333332 2446799999999996 99999632
Q ss_pred ----cEEEEEcCCCeE--EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcE
Q psy4771 133 ----GLYKVNVTTGQT--EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMV 205 (337)
Q Consensus 133 ----gv~~vd~~~g~~--~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~l 205 (337)
.++.++.+++.. ..+. .+..|+++++++ +|+|
T Consensus 202 ~~~~~v~~~~~~g~~~~~~~l~-----------------------------------------~~~~p~giavdp~~g~l 240 (430)
T 3tc9_A 202 NDRPNNYILTRESGFKVITELT-----------------------------------------KGQNCNGAETHPINGEL 240 (430)
T ss_dssp TTSEEEEEEEGGGTSCSEEEEE-----------------------------------------ECSSCCCEEECTTTCCE
T ss_pred cccceEEEEeCCCceeeeeeec-----------------------------------------cCCCceEEEEeCCCCEE
Confidence 356666654321 1111 256799999999 8999
Q ss_pred EEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC--CC
Q psy4771 206 YWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGP--KQ 281 (337)
Q Consensus 206 yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~--~~ 281 (337)
||+|... ++|+++++++++...+. .....|++|+++++|++|||++...++|++++.++. ..
T Consensus 241 yv~d~~~--------------~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~ 306 (430)
T 3tc9_A 241 YFNSWNA--------------GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRL 306 (430)
T ss_dssp EEEETTT--------------TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred EEEECCC--------------CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccc
Confidence 9999863 48999999877653332 234679999999999999999999999999999863 12
Q ss_pred CceeeeecC--CC------------CCCC-ceeE--------CCCCCEEEEecCC
Q psy4771 282 GKSEVFIDG--LP------------GLPD-NVKR--------DSKGNFLVSLVCP 313 (337)
Q Consensus 282 ~~~~~~~~~--~~------------g~Pd-gi~~--------d~dG~l~va~~~~ 313 (337)
....+++.. .. ..|. |+++ |++|+|||+....
T Consensus 307 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n 361 (430)
T 3tc9_A 307 TTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDREN 361 (430)
T ss_dssp CCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGG
T ss_pred cceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCC
Confidence 222333321 11 1377 8888 5679999999765
No 27
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=4.1e-16 Score=139.35 Aligned_cols=213 Identities=15% Similarity=0.142 Sum_probs=151.6
Q ss_pred ccCccEEEe-eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEE
Q psy4771 62 IHGPEAVVK-HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKV 137 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~v 137 (337)
...|.++++ .++.+| ++..+++|++++.. +...+. .. .....|.+++++++|++||++.. .+|+++
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~-~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 130 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYP-LP---------QPDSGPYGITEGLNGDIWFTQLNGDRIGKL 130 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE-CS---------STTCCEEEEEECSTTCEEEEETTTTEEEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEec-CC---------CCCCCCccceECCCCCEEEEccCCCeEEEE
Confidence 357999998 678899 66668899999874 333221 11 12367999999999999999874 459999
Q ss_pred EcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeecccc------CCCCCCCCccEEEcCCCcEEE
Q psy4771 138 NVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEI------DGAKPQIPNSVTVDSDGMVYW 207 (337)
Q Consensus 138 d~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~------~~~~~~~pn~v~vd~~G~lyv 207 (337)
|++ +++..+... ..+ ..|..++++++|+++ ..+.|..++... .......|.+++++++|++|+
T Consensus 131 ~~~-g~~~~~~~~---~~~---~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 131 TAD-GTIYEYDLP---NKG---SYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp CTT-SCEEEEECS---STT---CCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred CCC-CCEEEccCC---CCC---CCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEE
Confidence 998 666554321 111 258899999999977 234666665310 011346789999999999999
Q ss_pred EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCcee
Q psy4771 208 SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSE 285 (337)
Q Consensus 208 td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~ 285 (337)
++... +.|+++|+ +++..... .....|.+|+++++|+ |||++...++|.+|+.++ ...
T Consensus 204 ~~~~~--------------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~ 263 (300)
T 2qc5_A 204 VEIMG--------------NKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITNDN----TIQ 263 (300)
T ss_dssp EETTT--------------TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTTS----CEE
T ss_pred EccCC--------------CEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCCC----cEE
Confidence 98752 37889998 45544332 3467899999999985 999999889999999743 222
Q ss_pred eee-cCCCCCCCceeECCCCCEEEEec
Q psy4771 286 VFI-DGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 286 ~~~-~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
.+. ......|.+|++|++|++|++..
T Consensus 264 ~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 264 EYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred EEECCccCCccceeEeCCCCCEEEEcc
Confidence 221 11124599999999999999984
No 28
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=9.9e-17 Score=146.51 Aligned_cols=194 Identities=24% Similarity=0.324 Sum_probs=142.4
Q ss_pred ccCccEEEe-eCCeEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-----
Q psy4771 62 IHGPEAVVK-HKGDLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF----- 132 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~----- 132 (337)
...|+++++ .+|.|| ++..+++|++++.. +...+.. .....|.+++++++|++||++...
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-----------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-----------SHKANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-----------CSSSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee-----------CCCCCcceEEECCCCcEEEEeCCCCCCCc
Confidence 346899998 677788 78889999999873 3333211 122569999999999999998654
Q ss_pred cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCC
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 212 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~ 212 (337)
+|+++|+++++...+... . . ....+++++++++|++|+++...
T Consensus 113 ~i~~~d~~~~~~~~~~~~---~-~---------------------------------~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIED---L-S---------------------------------TAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp EEEEECTTSCSCEEEECS---S-S---------------------------------SCCCEEEEEECTTSCEEEEECCC
T ss_pred eEEEEeCCCCEEEEEEcc---C-c---------------------------------cCCcccceEECCCCCEEEEeccc
Confidence 699999988876644321 0 0 23468999999999999998642
Q ss_pred CccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC--CCCCc--eeeee
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG--PKQGK--SEVFI 288 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g--~~~~~--~~~~~ 288 (337)
. .....+.|+++|+++++...+...+..|+++++++||+.||+++...++|++|+++. ..... ...+.
T Consensus 156 ~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~ 227 (333)
T 2dg1_A 156 Y--------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY 227 (333)
T ss_dssp B--------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE
T ss_pred c--------ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE
Confidence 1 012356899999987777666666778999999999999999998889999999853 21111 12222
Q ss_pred cCCC--CCCCceeECCCCCEEEEecC
Q psy4771 289 DGLP--GLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 289 ~~~~--g~Pdgi~~d~dG~l~va~~~ 312 (337)
. .. ..|++|++|++|++|++...
T Consensus 228 ~-~~~~~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 228 Y-FTGHEGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp E-CCSSSEEEEEEEBTTCCEEEEEET
T ss_pred e-cCCCCCCCceEECCCCCEEEEEcC
Confidence 2 22 36999999999999999854
No 29
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.75 E-value=1.2e-16 Score=162.52 Aligned_cols=187 Identities=13% Similarity=0.187 Sum_probs=138.9
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeCCce----eEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCc
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSGGKL----VPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFG 133 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~g 133 (337)
+..|.+|++ .++.|| +|..+++|++++..+. .....+ ...+..|.||++|..+ +|||+|...+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi---------~~~l~~P~GLAvD~~~~~LY~tD~~~~ 493 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---------SRDIQAPDGLAVDWIHSNIYWTDSVLG 493 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE---------CSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE---------ecCCCCcceeeeeecCCcEEEEecCCC
Confidence 457899998 367787 9999999999986321 111111 1345789999999876 9999998754
Q ss_pred -EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEEEcCC
Q psy4771 134 -LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSS 211 (337)
Q Consensus 134 -v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyvtd~~ 211 (337)
|.++++++...+.++.. .+..|++|+||+. |.|||||++
T Consensus 494 ~I~v~~ldG~~~~~l~~~---------------------------------------~l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 494 TVSVADTKGVKRKTLFRE---------------------------------------NGSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp EEEEEETTSSSEEEEEEC---------------------------------------TTCCEEEEEEETTTTEEEEEECS
T ss_pred eEEEEeCCCCeEEEEEeC---------------------------------------CCCCcceEEEecCCCCEEEecCC
Confidence 99999987776666531 3567999999985 789999976
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecC
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDG 290 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~ 290 (337)
.. ++|.++++++...+.+. .++..|+||++++++++|||+|...++|.+++++|.. ..+++..
T Consensus 535 ~~-------------~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~---~~~v~~~ 598 (791)
T 3m0c_C 535 TP-------------AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILED 598 (791)
T ss_dssp SS-------------CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEEC
T ss_pred CC-------------CeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc---eEEEecC
Confidence 32 48889988766554444 4688999999998888999999999999999998752 3333331
Q ss_pred --CCCCCCceeECCCCCEEEEecCC
Q psy4771 291 --LPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 291 --~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.-..|.+|+++. ++||++.+..
T Consensus 599 ~~~l~~P~glav~~-~~lYwtD~~~ 622 (791)
T 3m0c_C 599 EKRLAHPFSLAVFE-DKVFWTDIIN 622 (791)
T ss_dssp TTTTSSEEEEEEET-TEEEEEETTT
T ss_pred CCccCCCCEEEEeC-CEEEEEECCC
Confidence 112488898864 4799998765
No 30
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.75 E-value=1.9e-16 Score=150.23 Aligned_cols=183 Identities=15% Similarity=0.076 Sum_probs=133.9
Q ss_pred cCccccCccCCcceEEECCCCcEEEEECC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---cc-c
Q psy4771 103 YGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---QT-E 177 (337)
Q Consensus 103 ~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~~-~ 177 (337)
++......+..|.+|++|++|+|||+|.. +.|+++|++++++..+... +. .|+ ++++++|+.+ .. +
T Consensus 122 dG~~~~a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-----~~---~~~-ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 122 DGDLASAKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-----FK---GGK-PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CBSTTTCCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-----CC---BCB-CEECTTSSEEEEEBSST
T ss_pred CCcHHHcccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-----CC---CCc-eeEecCCCcEEEEecCC
Confidence 34444456789999999999999999976 4599999999988887642 22 477 9999999865 11 2
Q ss_pred --ceeeeccccC----------CCCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE--
Q psy4771 178 --QLISMDTEID----------GAKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL-- 242 (337)
Q Consensus 178 --~v~~~~~~~~----------~~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~-- 242 (337)
.|..++..-. ......|+++++++ +|+||+++. .++|+++|++++....+
T Consensus 193 ~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------------~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 193 THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------------NKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------------TCEEEEEETTTCCEEEEEE
T ss_pred CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------------CCcEEEEECCCCCEEEEec
Confidence 5666553211 11457899999999 789999775 24899999987765544
Q ss_pred --eccc--ccee-eEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCC--------------CCCCCceeECCC
Q psy4771 243 --IANL--HFAN-GVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGL--------------PGLPDNVKRDSK 303 (337)
Q Consensus 243 --~~~~--~~p~-gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~--------------~g~Pdgi~~d~d 303 (337)
..+. ..|. +++++++++.|||++...++|++++.++. ...++... -..|.||++|++
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 2221 2245 99999977799999999999999997653 22232211 134999999999
Q ss_pred CCEEEEec-CC
Q psy4771 304 GNFLVSLV-CP 313 (337)
Q Consensus 304 G~l~va~~-~~ 313 (337)
|++||+.. ..
T Consensus 334 G~lyvad~~~~ 344 (409)
T 3hrp_A 334 GNFYIVDGFKG 344 (409)
T ss_dssp CCEEEEETTTT
T ss_pred CCEEEEeCCCC
Confidence 99999997 54
No 31
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=1e-15 Score=136.69 Aligned_cols=216 Identities=11% Similarity=0.164 Sum_probs=152.1
Q ss_pred cccCccEEEe-eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEE
Q psy4771 61 EIHGPEAVVK-HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYK 136 (337)
Q Consensus 61 ~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~ 136 (337)
....|.++++ .+|.+| ++..+++|.+++.. ....+. .. .....|.+|++|++|++|+++.. .+|++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~-~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYP-LP---------TPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE-CS---------STTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEec-CC---------cccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 3457999998 678899 55557899999874 322221 11 12367999999999999999875 45999
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeecccc------CCCCCCCCccEEEcCCCcEE
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEI------DGAKPQIPNSVTVDSDGMVY 206 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~------~~~~~~~pn~v~vd~~G~ly 206 (337)
+|++ ++...+..+ ..+ ..|.+++++++|+++ ..+.|..++... .......|++++++++|++|
T Consensus 83 ~~~~-g~~~~~~~~---~~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 83 ITKK-GIIKEYTLP---NPD---SAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp ECTT-SCEEEEECS---STT---CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred ECCC-CcEEEEeCC---CcC---CCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEE
Confidence 9987 555554421 112 248899999999987 234666654310 01124578999999999999
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE--eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCce
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL--IANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKS 284 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~--~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~ 284 (337)
+++.. .+.|+++|+ +++.... ......|++++++++|+ ||+++...++|.+++.++. .
T Consensus 156 v~~~~--------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~----~ 215 (299)
T 2z2n_A 156 FTENQ--------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTSGE----I 215 (299)
T ss_dssp EEETT--------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTCC----E
T ss_pred EEeCC--------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCCCc----E
Confidence 98864 248899998 6665543 23466799999999986 9999998899999997322 2
Q ss_pred eeee-cCCCCCCCceeECCCCCEEEEecCC
Q psy4771 285 EVFI-DGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 285 ~~~~-~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..+. ......|.+|++|++|++|++....
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 2221 1112458999999999999998543
No 32
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.74 E-value=1.6e-16 Score=158.33 Aligned_cols=192 Identities=14% Similarity=0.113 Sum_probs=139.9
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeC-Cce-eEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCc-E
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSG-GKL-VPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFG-L 134 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~g-v 134 (337)
+..+.+|++ .++.|| +|..+++|+|++. ++. ..+..-... .......|.||++|..+ +||++|...+ |
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~-----~~~~~~~p~glAvD~~~~nLY~td~~~~~I 413 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVP-----SQNLEIQPYDLSIDIYSRYIYWTCEATNVI 413 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------CCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccc-----cccccCCcceEEeeccCCeEEEEcCCCCEE
Confidence 456777877 367787 9999999999986 322 222110000 00235689999999985 8999998755 7
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~ 213 (337)
.+++.++...+.+... .+..|++|++|+ +|.|||||+...
T Consensus 414 ~v~~~~G~~~~~l~~~---------------------------------------~l~~Pr~iavdp~~g~ly~tD~g~~ 454 (628)
T 4a0p_A 414 NVTRLDGRSVGVVLKG---------------------------------------EQDRPRAVVVNPEKGYMYFTNLQER 454 (628)
T ss_dssp EEEETTSCEEEEEEEC---------------------------------------TTCCEEEEEEETTTTEEEEEEEETT
T ss_pred EEEECCCCeEEEEEeC---------------------------------------CCCceeeEEEecCCCeEEEeecCCC
Confidence 7777765544444421 356799999999 899999998632
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
.++|++.++++...+.+.. .+..|+||+++++++.||++|...++|.+++++|. ..+++.....
T Consensus 455 ------------~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~---~r~~~~~~~~ 519 (628)
T 4a0p_A 455 ------------SPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGA---NRIVLEDSNI 519 (628)
T ss_dssp ------------EEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSC
T ss_pred ------------CCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCC---ceEEEEcCCC
Confidence 1379999988665555554 68899999999998899999999999999999875 2455554333
Q ss_pred CCCCceeECCCCCEEEEecCC
Q psy4771 293 GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..|.||+++. |++|++.+..
T Consensus 520 ~~P~glav~~-~~ly~tD~~~ 539 (628)
T 4a0p_A 520 LQPVGLTVFE-NWLYWIDKQQ 539 (628)
T ss_dssp SCEEEEEEET-TEEEEEETTT
T ss_pred CCcEEEEEEC-CEEEEEECCC
Confidence 4699999987 7899999766
No 33
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.73 E-value=1.1e-17 Score=168.74 Aligned_cols=188 Identities=12% Similarity=0.197 Sum_probs=135.3
Q ss_pred ccCccEEEe--eCCeEE-EEecCcEEEEEeCCce---eEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC-c
Q psy4771 62 IHGPEAVVK--HKGDLY-MGVDGGHILKLSGGKL---VPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF-G 133 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-g 133 (337)
+..|++|++ .++.|| +|..+++|++++..+. .....+ .......|.||++|. .|+|||+|... .
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--------i~~~~~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--------ISRDIQAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--------CCSCC--CCCEECCCSSSBCEECCTTTSC
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--------EeCCCCCcceEEEEeeCCcEEEEeccCCe
Confidence 457899998 367788 8999999999986321 000000 012346799999995 56999999764 4
Q ss_pred EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCC
Q psy4771 134 LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 212 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~ 212 (337)
|.+++++++..+.++.. .+..|++|++|+ +|.||++|+..
T Consensus 477 I~v~d~dg~~~~~l~~~---------------------------------------~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFRE---------------------------------------QGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp EEEEBSSSCCEEEECCC---------------------------------------SSCCCCCEECCSSSSCCEECCCSS
T ss_pred EEEEecCCCceEEEEeC---------------------------------------CCCCcceEEEccCCCcEEEcccCC
Confidence 99999987766665431 356799999998 56799999752
Q ss_pred CccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecC-
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDG- 290 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~- 290 (337)
.++|+++++++...+++. ..+..|+|||+++++++|||+++..++|.+++++|. ..++++..
T Consensus 518 -------------~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~ 581 (699)
T 1n7d_A 518 -------------PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDE 581 (699)
T ss_dssp -------------SCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCS
T ss_pred -------------CCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecC
Confidence 248888887654444443 568899999999998899999999999999999863 23444431
Q ss_pred -CCCCCCceeECCCCCEEEEecCC
Q psy4771 291 -LPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 291 -~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.-+.|+||++|.+ ++|++.+..
T Consensus 582 ~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 582 KRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp SSCSSCCCCEEETT-EEEEECSTT
T ss_pred CcCCCceEeEEECC-EEEEEeCCC
Confidence 2246999999976 677777654
No 34
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.72 E-value=1e-15 Score=136.12 Aligned_cols=181 Identities=15% Similarity=0.152 Sum_probs=130.2
Q ss_pred ccCcccCccEEEee--CCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEECC-
Q psy4771 58 FENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAY- 131 (337)
Q Consensus 58 ~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~- 131 (337)
....+..|++++++ ++.+| ++..+++|.+++.. +..... . ......|.|+++|++ |+|||++..
T Consensus 74 ~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~-~---------~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL-F---------DTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-E---------CSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE-E---------ECCCCCccEEEEeeCCCEEEEEECCC
Confidence 33445689999993 67888 89999999999873 222111 1 122367999999994 799999975
Q ss_pred --CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEEE
Q psy4771 132 --FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWS 208 (337)
Q Consensus 132 --~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyvt 208 (337)
..|++++.++...+.+.. ..+..|+++++|++ ++||++
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~---------------------------------------~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQ---------------------------------------DNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp SSCEEEEEETTSCCCEEEEC---------------------------------------TTCSCEEEEEEETTTTEEEEE
T ss_pred CCcEEEEEecCCCCcEEEEE---------------------------------------CCCCCCcEEEEcCCCCEEEEE
Confidence 248888887554444432 03567999999996 569999
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI 288 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~ 288 (337)
|... ++|+++|++++..+.+...+..|.||+++ ++.|||++..+++|.+++.++++. ...+.
T Consensus 185 d~~~--------------~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~--~~~i~ 246 (267)
T 1npe_A 185 DAGT--------------HRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE--MDTFH 246 (267)
T ss_dssp ETTT--------------TEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE--EEEEC
T ss_pred ECCC--------------CEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc--eEEEc
Confidence 9874 38999999876666666778899999985 458999999999999999764321 22222
Q ss_pred cCCCCCCCceeECCCCC
Q psy4771 289 DGLPGLPDNVKRDSKGN 305 (337)
Q Consensus 289 ~~~~g~Pdgi~~d~dG~ 305 (337)
.+....|.||++.++++
T Consensus 247 ~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 247 PHKQTRLYGITIALSQC 263 (267)
T ss_dssp CSSCCCCCCEEEECSCC
T ss_pred cccccccceeeecCccC
Confidence 22112499999999875
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=4.8e-16 Score=138.96 Aligned_cols=185 Identities=20% Similarity=0.257 Sum_probs=131.0
Q ss_pred CccCCcceEEECCCCcEEEEECCC-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceee-CCCCCcc--c---ccceee
Q psy4771 109 QQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV-DSDGQTG--Q---TEQLIS 181 (337)
Q Consensus 109 ~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~-~~~g~~~--~---~~~v~~ 181 (337)
..+..|.+++++++|++||++... +|.++|+++..+..+.... ...+ ....|.++++ +++|+++ . .+.|..
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~-~~~~-~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG-KRDS-QLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS-SSTT-CBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC-CCcc-cccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 456789999999999999998654 5999998865555543210 0011 1235889999 6888887 2 346665
Q ss_pred eccc------cCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEE
Q psy4771 182 MDTE------IDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVE 253 (337)
Q Consensus 182 ~~~~------~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia 253 (337)
++.. +.......|++++++++|++|+++... ++|+++|+++.....+. ..+..|++|+
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------------~~i~~~~~~g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV--------------MRVIIFDQNGNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT--------------TEEEEECTTSCEEEEEECTTTCSSEEEEE
T ss_pred ECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC--------------CEEEEEcCCCCEEEEeCCCCccCCcEEEE
Confidence 5521 111235679999999999999998753 48899997654444333 3467899999
Q ss_pred EccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec-CCCCCCCceeECCCCCEEEEecCC
Q psy4771 254 LSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID-GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 254 ~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~-~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
++++| .+||++...++|.+|+.++.. ...+.. +....|.+|++|++|++||+....
T Consensus 171 ~~~~g-~l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 171 VNDKQ-EIFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp ECSSS-EEEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred ECCCC-CEEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 99998 599999999999999975431 222221 112459999999999999998643
No 36
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=4.8e-16 Score=142.65 Aligned_cols=212 Identities=13% Similarity=0.160 Sum_probs=133.7
Q ss_pred cCcccCccEEEe-eCCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEEC-C-C
Q psy4771 59 ENEIHGPEAVVK-HKGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADA-Y-F 132 (337)
Q Consensus 59 ~g~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~-~-~ 132 (337)
.+.+..|.++++ .+|.+| ++..+++|.+++. ++...+..++...........+..|.||++++ +|+|||+|. . +
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 345668999999 678888 8889999999997 33212233332111000124456899999999 799999996 3 4
Q ss_pred cEEEEEcCCCeEEEEeccccccC--CCCCCCCCceeeCCC-CCcc----cccceeeeccc-------cCC-CCCCCCccE
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEID--GAKPQIPNSVTVDSD-GQTG----QTEQLISMDTE-------IDG-AKPQIPNSV 197 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~~--g~~~~~P~~v~~~~~-g~~~----~~~~v~~~~~~-------~~~-~~~~~pn~v 197 (337)
.|.++++++..+..+........ ......|.+++++++ |+++ ..++|..++.. +.. .....+.++
T Consensus 167 ~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 167 RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 59999977555555432110000 011235888999888 7776 23455555532 000 011234555
Q ss_pred EEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe----ccccceeeEEEccCCCEEEEEeCCCCEEEE
Q psy4771 198 TVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI----ANLHFANGVELSADESFVIVAETMSSRVHR 273 (337)
Q Consensus 198 ~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~----~~~~~p~gia~~~dg~~lyva~~~~~~I~~ 273 (337)
++.+ |.+|.++.... +......+++.+|..+++..... ..+..|++|++++|| .|||++...++|++
T Consensus 247 ~~~p-g~~~~~~g~~~-------v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 247 SYIP-GFLFAVNGKPY-------FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWK 317 (329)
T ss_dssp EEET-TEEEEEECCCC-------TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEE
T ss_pred eecC-CEEEEeCCCEE-------eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEE
Confidence 5655 44444433210 00112347888887777765543 457789999999999 89999999999999
Q ss_pred EEeeCC
Q psy4771 274 YYLKGP 279 (337)
Q Consensus 274 ~~~~g~ 279 (337)
|++++.
T Consensus 318 ~~~~~~ 323 (329)
T 3fvz_A 318 FTLTEK 323 (329)
T ss_dssp EEEEEC
T ss_pred EeCCcc
Confidence 999864
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=9e-15 Score=130.54 Aligned_cols=211 Identities=11% Similarity=0.121 Sum_probs=149.7
Q ss_pred cCccEEEe-eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEEE
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVN 138 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd 138 (337)
..|.++++ .+|.+| ++..+++|++++.. +...+. .. .....|.+|+++++|+|||++.. .+|+++|
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~-~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYT-LP---------NPDSAPYGITEGPNGDIWFTEMNGNRIGRIT 126 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE-CS---------STTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEe-CC---------CcCCCceeeEECCCCCEEEEecCCceEEEEC
Confidence 47899998 678899 56668899999873 433322 11 13457999999999999999865 4599999
Q ss_pred cCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccc-----c-CCCCCCCCccEEEcCCCcEEEE
Q psy4771 139 VTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTE-----I-DGAKPQIPNSVTVDSDGMVYWS 208 (337)
Q Consensus 139 ~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~-----~-~~~~~~~pn~v~vd~~G~lyvt 208 (337)
+ +++...+... ..+ ..|.+++++++|+++ ..++|..++.. + .......|++++++++|++|++
T Consensus 127 ~-~g~~~~~~~~---~~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 199 (299)
T 2z2n_A 127 D-DGKIREYELP---NKG---SYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFV 199 (299)
T ss_dssp T-TCCEEEEECS---STT---CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred C-CCCEEEecCC---CCC---CCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEE
Confidence 9 5666555321 111 148899999999887 23466665431 0 0113456889999999999999
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEV 286 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~ 286 (337)
+... +.|+++|+ +++..... .....|.+|+++++|+ |||++...++|.+|+.++ ....
T Consensus 200 ~~~~--------------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~g----~~~~ 259 (299)
T 2z2n_A 200 EIIG--------------NKIGRITT-SGEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSNN----IIEE 259 (299)
T ss_dssp ETTT--------------TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETTT----EEEE
T ss_pred ccCC--------------ceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCCC----ceEE
Confidence 8652 37899998 66654432 2356899999999985 999998889999999743 2223
Q ss_pred ee-cCCCCCCCceeECCCCCEEEEec
Q psy4771 287 FI-DGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 287 ~~-~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
+. ......|.++++ ++|++|++..
T Consensus 260 ~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 260 YPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp EECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred EeCCCCCCccceEEe-cCCCEEEEec
Confidence 21 111235899999 9999999975
No 38
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.71 E-value=2.2e-15 Score=137.82 Aligned_cols=178 Identities=16% Similarity=0.241 Sum_probs=129.5
Q ss_pred eccCcccCccEEEee--CCeEE-EEecCcEEEEEeC-Cce-eEEEecCccccCccccCccCCcceEEECC-CCcEEEEEC
Q psy4771 57 LFENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GKL-VPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADA 130 (337)
Q Consensus 57 ~~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~ 130 (337)
+....+..|++++++ ++.|| +|..+++|.+++. ++. ..+. ...+.+|.|+++|+ +|+||++|.
T Consensus 71 ~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-----------~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 71 VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-----------RENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-----------ECTTCCEEEEEEETTTTEEEEEEC
T ss_pred EEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-----------ECCCCCcceEEeCCCCCEEEEEcc
Confidence 344456789999994 67888 8999999999987 332 2221 12346899999997 569999997
Q ss_pred CC--cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEE
Q psy4771 131 YF--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYW 207 (337)
Q Consensus 131 ~~--gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyv 207 (337)
.. .|.++++++...+.+... .+..|++|++|++ ++||+
T Consensus 140 ~~~~~I~~~~~dG~~~~~~~~~---------------------------------------~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 140 GTPAKIKKGGLNGVDIYSLVTE---------------------------------------NIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp SSSCEEEEEETTSCCEEEEECS---------------------------------------SCSCEEEEEEETTTTEEEE
T ss_pred CCCCeEEEEcCCCCCeEEEEEC---------------------------------------CCCCceEEEEeccCCEEEE
Confidence 63 599999886655555421 3678999999974 67999
Q ss_pred EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec---cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCce
Q psy4771 208 SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA---NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKS 284 (337)
Q Consensus 208 td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~---~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~ 284 (337)
+|... ++|.++|.++...+.+.. .+..|.||+++ ++.||+++..+++|.+++...++ ..
T Consensus 181 ~D~~~--------------~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~--~~ 242 (316)
T 1ijq_A 181 VDSKL--------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS--DV 242 (316)
T ss_dssp EETTT--------------TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC--CC
T ss_pred EECCC--------------CeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCc--ce
Confidence 99864 389999988655555543 36789999995 35899999999999999974221 23
Q ss_pred eeeecCCCCCCCceeECCC
Q psy4771 285 EVFIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 285 ~~~~~~~~g~Pdgi~~d~d 303 (337)
+++..+++. |.||++...
T Consensus 243 ~~i~~~~~~-p~~i~v~~~ 260 (316)
T 1ijq_A 243 NLLAENLLS-PEDMVLFHN 260 (316)
T ss_dssp EEEECSCSC-CCCEEEESG
T ss_pred EEEecCCCC-ceEEEEecc
Confidence 444444444 888887643
No 39
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.71 E-value=4.5e-15 Score=137.93 Aligned_cols=243 Identities=13% Similarity=0.124 Sum_probs=153.6
Q ss_pred CceeccCcccCccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCC----CcEEEE
Q psy4771 54 AEKLFENEIHGPEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN----GALHVA 128 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~----G~lyVa 128 (337)
.+.++++ +..|+++++ .+|.+|+....|+|++++.++...+..+... ......|+||+++++ |.|||+
T Consensus 23 ~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~------~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 23 VEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVY------HRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp EEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCC------CSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEe------ecCCCCceeEEECCCCCCCCEEEEE
Confidence 4445554 678999999 7888996666799999986554444332210 123467999999998 799999
Q ss_pred ECC------CcEEEEEcCCCe---EEEEeccccccCCCCCCCCCceeeCCCCCcc-cc----------------cceeee
Q psy4771 129 DAY------FGLYKVNVTTGQ---TEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-QT----------------EQLISM 182 (337)
Q Consensus 129 d~~------~gv~~vd~~~g~---~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-~~----------------~~v~~~ 182 (337)
+.. +.|.+++.+++. .+.+.... .........|..+++++||+++ +. +.|..+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~-p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGI-PARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEE-CCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeC-CCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 864 459999887553 22333210 1001112358899999999988 11 356665
Q ss_pred ccccC-------------C-----CCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCC-------
Q psy4771 183 DTEID-------------G-----AKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT------- 236 (337)
Q Consensus 183 ~~~~~-------------~-----~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~------- 236 (337)
+.+.. . ..+..|+++++|+ +|+||++|...+. +.. .+...|.++.+..
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~---~~~---~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSG---EQG---YGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------------CCCEEEEECTTCBCCTTTC
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCC---CCC---CCCeEEEEeccCCcCCCCcc
Confidence 53220 0 0246699999999 7899999987542 000 0001233332211
Q ss_pred -------C--eeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCC----CceeeeecCCCCCCCceeECCC
Q psy4771 237 -------K--KNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQ----GKSEVFIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 237 -------~--~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~----~~~~~~~~~~~g~Pdgi~~d~d 303 (337)
+ ...........|.|+++. +| .+||++...++|.++++++... ...+.+.+. .+.|.++++++|
T Consensus 249 ~g~~~~~~~~~p~~~~~~~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~-~~rp~~v~~~pd 325 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWPQGFPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG-FGRLREVQVGPD 325 (352)
T ss_dssp CSCCCCTTSCCCSEECTTCCCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES-SCCEEEEEECTT
T ss_pred cCCCCCCCCcCCeEecCCCCCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheeccc-CCCeeEEEECCC
Confidence 0 011111234578999994 56 6999999999999999975431 223444442 367999999999
Q ss_pred CCEEEEecCC
Q psy4771 304 GNFLVSLVCP 313 (337)
Q Consensus 304 G~l~va~~~~ 313 (337)
|.|||+....
T Consensus 326 G~lyv~~~~~ 335 (352)
T 2ism_A 326 GALYVTTSNR 335 (352)
T ss_dssp SCEEEEECST
T ss_pred CcEEEEEeCC
Confidence 9999999754
No 40
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.70 E-value=1.7e-15 Score=140.60 Aligned_cols=178 Identities=15% Similarity=0.205 Sum_probs=128.5
Q ss_pred eccCcccCccEEEee--CCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECC
Q psy4771 57 LFENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAY 131 (337)
Q Consensus 57 ~~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~ 131 (337)
+....+..|++++++ ++.|| ++...++|.+++. ++..... . ......|.||++|+ +|.||++|..
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-~---------~~~l~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL-L---------WQSLEKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-E---------CTTCSCEEEEEEETTTTEEEEEECS
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE-E---------eCCCCCcceEEEecCcCeEEEeccC
Confidence 333445689999994 78888 9999999999987 3332221 1 13357799999997 5699999986
Q ss_pred C--cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEE
Q psy4771 132 F--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWS 208 (337)
Q Consensus 132 ~--gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvt 208 (337)
. .|.++++++...+.+.. ..+..||+|++|+ +++||++
T Consensus 180 ~~~~I~r~~~dG~~~~~~~~---------------------------------------~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 180 NTPRIEASSMDGSGRRIIAD---------------------------------------THLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp SSCEEEEEETTSCSCEESCC---------------------------------------SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCCcEEEEE---------------------------------------CCCCCcceEEEeCCCCEEEEE
Confidence 5 39999988655554432 1467899999996 6779999
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEE-eccccceeeEEEccCCCEEEEEeCCCCEEEEEEe-eCCCCCceee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL-IANLHFANGVELSADESFVIVAETMSSRVHRYYL-KGPKQGKSEV 286 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~-~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~-~g~~~~~~~~ 286 (337)
|... ++|+++|.++...+.+ ..++..|.||+++ ++.||+++..+++|.+++. +|. ..++
T Consensus 221 D~~~--------------~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~---~~~~ 281 (349)
T 3v64_C 221 DAKH--------------HVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGK---NQEI 281 (349)
T ss_dssp ETTT--------------TEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC---SCEE
T ss_pred ECCC--------------CEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCC---ccEE
Confidence 9864 3899999876544443 3568899999994 3489999999999999984 443 2334
Q ss_pred eecCCCCCCCceeECCC
Q psy4771 287 FIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 287 ~~~~~~g~Pdgi~~d~d 303 (337)
+...+ ..|.||++...
T Consensus 282 i~~~~-~~p~gi~v~~~ 297 (349)
T 3v64_C 282 IRNKL-HFPMDIHTLHP 297 (349)
T ss_dssp EECSC-SCCCCEEEECG
T ss_pred eccCC-CCCceEEEEcc
Confidence 44333 34889988643
No 41
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.70 E-value=1.5e-14 Score=134.40 Aligned_cols=245 Identities=13% Similarity=0.155 Sum_probs=153.6
Q ss_pred CceeccCcccCccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCC----CcEEEE
Q psy4771 54 AEKLFENEIHGPEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN----GALHVA 128 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~----G~lyVa 128 (337)
++.++++ +..|++|++ .+|.||+....|+|++++.+..+.+..+... ......|.||+++++ |.|||+
T Consensus 21 ~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~------~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 21 ISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVA------NVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp EEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCC------CSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeecccee------ecCCCceeeEEeCCCCCcCCEEEEE
Confidence 4555554 678999999 7899997667799999975322344332200 122367999999997 799999
Q ss_pred ECC--------CcEEEEEcCCC--e---EEEEeccccccCCCCCCCCCceeeCCCCCcc-cc----------------cc
Q psy4771 129 DAY--------FGLYKVNVTTG--Q---TEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-QT----------------EQ 178 (337)
Q Consensus 129 d~~--------~gv~~vd~~~g--~---~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-~~----------------~~ 178 (337)
+.. ..|.+++.+++ . .+.+... ........|..+++++||+++ +. +.
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~---~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~ 170 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDG---IPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGK 170 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEE---EECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSE
T ss_pred EeccCCCCCcceEEEEEEECCCCcCcCccEEEEEc---CCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeE
Confidence 864 46999988755 1 2333221 111112358899999999988 11 35
Q ss_pred eeeeccccC-------------CCCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEEEcC------CCC-
Q psy4771 179 LISMDTEID-------------GAKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNP------KTK- 237 (337)
Q Consensus 179 v~~~~~~~~-------------~~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~------~~~- 237 (337)
|..++.+.. ...+..|+++++|+ +|+||++|...+..+-+..+. .|.-|-+.. ..+
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~---~G~nyGwp~~~g~~~~~~~ 247 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL---KGGNYGWPLATGKAGRGEF 247 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC---TTCBCCTTTCCSCCCCTTS
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec---CCCcCCCCcccCCCCCCCC
Confidence 666653221 01356799999999 799999998754211111110 111000000 000
Q ss_pred -eeEEEe-ccccceeeEEE-------ccCCCEEEEEeCCCCEEEEEEeeCC-CCCceeeeecCCCCCCCceeECCCCCEE
Q psy4771 238 -KNKVLI-ANLHFANGVEL-------SADESFVIVAETMSSRVHRYYLKGP-KQGKSEVFIDGLPGLPDNVKRDSKGNFL 307 (337)
Q Consensus 238 -~~~~~~-~~~~~p~gia~-------~~dg~~lyva~~~~~~I~~~~~~g~-~~~~~~~~~~~~~g~Pdgi~~d~dG~l~ 307 (337)
...... .....|.|+++ +.+| .+||++...++|+++++++. .....+.+..+..+.|.++++++||.||
T Consensus 248 ~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~ly 326 (354)
T 3a9g_A 248 VDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGIL 326 (354)
T ss_dssp CCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEE
T ss_pred cCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEE
Confidence 000111 22346899999 3566 79999999999999999753 2322344544345679999999999999
Q ss_pred EEecC
Q psy4771 308 VSLVC 312 (337)
Q Consensus 308 va~~~ 312 (337)
|+...
T Consensus 327 v~~~~ 331 (354)
T 3a9g_A 327 ISTSN 331 (354)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 99863
No 42
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.69 E-value=3.1e-15 Score=137.08 Aligned_cols=179 Identities=15% Similarity=0.191 Sum_probs=129.8
Q ss_pred eccCcccCccEEEee--CCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEECC
Q psy4771 57 LFENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAY 131 (337)
Q Consensus 57 ~~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~ 131 (337)
+....+..|++++++ ++.|| +|..+++|.+++. ++..... . ......|.||++|+. |.||++|..
T Consensus 73 ~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-~---------~~~~~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 73 VVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL-F---------WQELDQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp EEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-E---------CSSCSSEEEEEEEGGGTEEEEEECS
T ss_pred EEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE-E---------eCCCCCccEEEEeCCCCEEEEEecC
Confidence 333446689999994 78888 9999999999987 3332221 1 134578999999975 799999964
Q ss_pred --CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEE
Q psy4771 132 --FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWS 208 (337)
Q Consensus 132 --~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvt 208 (337)
..|+++++++...+.+... .+..||+|++|+ +++||++
T Consensus 143 ~~~~I~r~~~dG~~~~~~~~~---------------------------------------~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 143 EVPKIERAGMDGSSRFIIINS---------------------------------------EIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp SSCEEEEEETTSCSCEEEECS---------------------------------------SCSCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEEEC---------------------------------------CCCCccEEEEeccCCEEEEE
Confidence 4599999986655555421 467899999997 5679999
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVF 287 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~ 287 (337)
|... ++|+++|.++...+.+.. .+..|.|++++ ++.+|+++..+++|.+++...++. .+.+
T Consensus 184 D~~~--------------~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~--~~~i 245 (318)
T 3sov_A 184 DAKL--------------NFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEG--LREI 245 (318)
T ss_dssp ETTT--------------TEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS--CEEE
T ss_pred ECCC--------------CEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCc--eEEE
Confidence 9864 389999988665555554 68899999996 347999999999999999842211 2333
Q ss_pred ecCCCCCCCceeECCC
Q psy4771 288 IDGLPGLPDNVKRDSK 303 (337)
Q Consensus 288 ~~~~~g~Pdgi~~d~d 303 (337)
...+. .|.+|++...
T Consensus 246 ~~~~~-~P~~i~v~~~ 260 (318)
T 3sov_A 246 HSDIF-SPMDIHAFSQ 260 (318)
T ss_dssp ECCCS-SCCCEEEECG
T ss_pred eCCCC-CCcEEEEecc
Confidence 33232 4788887543
No 43
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=2.2e-15 Score=144.77 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=134.7
Q ss_pred cCcccCccEEEee---CCeEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEE-------CCCCc-
Q psy4771 59 ENEIHGPEAVVKH---KGDLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKF-------DKNGA- 124 (337)
Q Consensus 59 ~g~~~~P~~i~~~---~g~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~-------d~~G~- 124 (337)
++.+..|.+|+++ ++.|| ++..+++|.+++.. .+..+...+. ....+|.+|++ +++|+
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~--------~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT--------IPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT--------SSCSBEEEEEECCCBTTTBCTTCE
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc--------cccCCCcEEEEeecccccCCCCCE
Confidence 4556689999995 47899 77767889999873 4444432221 23568999999 99995
Q ss_pred EEEEECCC-------cEEEEEcCC-CeEE------EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 125 LHVADAYF-------GLYKVNVTT-GQTE------QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 125 lyVad~~~-------gv~~vd~~~-g~~~------~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
|||+|... .++.++++. |.+. .+. .
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-----------------------------------------~ 245 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-----------------------------------------A 245 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-----------------------------------------E
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-----------------------------------------c
Confidence 99999754 266676443 2221 111 2
Q ss_pred CCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEEEcCC-------CCee------------EEE--eccccc
Q psy4771 191 PQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-------TKKN------------KVL--IANLHF 248 (337)
Q Consensus 191 ~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-------~~~~------------~~~--~~~~~~ 248 (337)
+.+|+++++++ +|.||+++.. .|+|+++|++ ++.. +.+ ......
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~--------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~ 311 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYE--------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSW 311 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETT--------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSC
T ss_pred CCCceEEEEcCCCCeEEEEECC--------------CCEEEEEecccccccccCceeecccccccccccceeEecCCCCC
Confidence 45799999999 6789999986 3489999987 5553 122 123457
Q ss_pred eeeEEEccCCCEEEEEeCCCCEEEEEEeeCCC--CCceeeeecC--CC------------CCCC-ceeEC-------CCC
Q psy4771 249 ANGVELSADESFVIVAETMSSRVHRYYLKGPK--QGKSEVFIDG--LP------------GLPD-NVKRD-------SKG 304 (337)
Q Consensus 249 p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~--~~~~~~~~~~--~~------------g~Pd-gi~~d-------~dG 304 (337)
|.+||++++|+.|||+|+.+++|++++.++.. .....+++.. .. ..|. |+++| .+|
T Consensus 312 p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g 391 (496)
T 3kya_A 312 EFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY 391 (496)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred ceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC
Confidence 89999999999999999999999999988642 1112334331 11 1477 88887 789
Q ss_pred CEEEEecCC
Q psy4771 305 NFLVSLVCP 313 (337)
Q Consensus 305 ~l~va~~~~ 313 (337)
+||||....
T Consensus 392 ~lyVaD~~N 400 (496)
T 3kya_A 392 DFYFVDRLN 400 (496)
T ss_dssp EEEEEEGGG
T ss_pred eEEEEECCC
Confidence 999999766
No 44
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=3.9e-15 Score=131.51 Aligned_cols=186 Identities=22% Similarity=0.309 Sum_probs=132.1
Q ss_pred ccCccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEc
Q psy4771 62 IHGPEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNV 139 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~ 139 (337)
...|.++++ .+|.+|+...+++|++++....... .+. ......|.+|+++++|+|||++... +|++++.
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~--------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 136 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLP--------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA 136 (270)
T ss_dssp CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECC--------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred cCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eee--------cCCcCCCcceEECCCCCEEEEECCCCEEEEEEC
Confidence 457999999 5778994433889999987332211 111 1223579999999999999998654 5888876
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccC------CCCCCCCccEEEcCCCcEEEEc
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEID------GAKPQIPNSVTVDSDGMVYWSD 209 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~------~~~~~~pn~v~vd~~G~lyvtd 209 (337)
.+........ .+ ...|.+++++++|+++ ..+.|..++.... ...+..|+++++|++|++|+++
T Consensus 137 ~~~~~~~~~~-----~~--~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 137 GSKTQTVLPF-----TG--LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp TCCSCEECCC-----CS--CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred CCceeEeecc-----cc--CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEE
Confidence 5443332211 11 1258999999999987 2346666653211 1234679999999999999999
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
... ++|+++|+++....... .++..|.+|++++||+ |||++...++|.+|++..
T Consensus 210 ~~~--------------~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 210 HNT--------------NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TTT--------------SCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCG
T ss_pred CCC--------------CcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCC
Confidence 753 48999998766544332 3467899999999995 999999999999999753
No 45
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.67 E-value=6.5e-15 Score=138.50 Aligned_cols=172 Identities=16% Similarity=0.233 Sum_probs=125.7
Q ss_pred CeEEEEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-EEEEEcCCCeEEEEe
Q psy4771 73 GDLYMGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLI 148 (337)
Q Consensus 73 g~ly~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v~~vd~~~g~~~~l~ 148 (337)
..|+... .++|.+++... ...+. .....|.|+++|+ +++||++|...+ |++++++++..+.+.
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~~~~------------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYTLLL------------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCEEEE------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred ceeEeec-CccceeeccCCCcEEEEe------------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 3444333 35588887632 22221 3456799999996 569999997654 999999887766654
Q ss_pred ccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCc
Q psy4771 149 SMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSG 227 (337)
Q Consensus 149 ~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G 227 (337)
.. .+..|+++++|+ +|+||++|...+
T Consensus 155 ~~---------------------------------------~~~~p~glavd~~~g~lY~~d~~~~-------------- 181 (386)
T 3v65_B 155 ST---------------------------------------GLESPGGLAVDWVHDKLYWTDSGTS-------------- 181 (386)
T ss_dssp CS---------------------------------------SCSCCCCEEEETTTTEEEEEETTTT--------------
T ss_pred eC---------------------------------------CCCCccEEEEEeCCCeEEEEcCCCC--------------
Confidence 31 356799999997 678999998743
Q ss_pred cEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCC-CEEEEEEeeCCCCCceeeeecCCCCCCCceeECC-CC
Q psy4771 228 RLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMS-SRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KG 304 (337)
Q Consensus 228 ~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~-~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~-dG 304 (337)
+|.++++++...+.+. .++..|+||+++|++++||+++... ++|++++++|.. ..++....-..|.||++|+ +|
T Consensus 182 ~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGT
T ss_pred eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCC
Confidence 7888888765544444 5688999999999888999999998 999999988742 3333332224599999995 56
Q ss_pred CEEEEecCC
Q psy4771 305 NFLVSLVCP 313 (337)
Q Consensus 305 ~l~va~~~~ 313 (337)
+||++....
T Consensus 259 ~lY~aD~~~ 267 (386)
T 3v65_B 259 RMYWVDAKH 267 (386)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 799998655
No 46
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=3.4e-15 Score=142.46 Aligned_cols=185 Identities=12% Similarity=0.217 Sum_probs=127.3
Q ss_pred ccCccEEEe-eCC-eEE-EEecCc----EEEEEeC-CceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC
Q psy4771 62 IHGPEAVVK-HKG-DLY-MGVDGG----HILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF 132 (337)
Q Consensus 62 ~~~P~~i~~-~~g-~ly-~d~~~g----~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~ 132 (337)
...|.+|++ .++ .|| ++..++ .++.++. +.......+ .....|+|+++|+ +|+|||+|...
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l----------~~~~~p~giavdp~~g~lyv~d~~~ 247 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL----------TKGQNCNGAETHPINGELYFNSWNA 247 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE----------EECSSCCCEEECTTTCCEEEEETTT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee----------ccCCCceEEEEeCCCCEEEEEECCC
Confidence 457999999 444 488 666433 5666665 332211111 2346799999999 78999999765
Q ss_pred -cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCC-cc----cccceeeeccccC-------------------
Q psy4771 133 -GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQ-TG----QTEQLISMDTEID------------------- 187 (337)
Q Consensus 133 -gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~-~~----~~~~v~~~~~~~~------------------- 187 (337)
.|++++++++....+... ..+ ..|.+++++++|+ ++ ....|..++....
T Consensus 248 ~~V~~~~~~~~~~~~~~~~---~~~---~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~ 321 (430)
T 3tc9_A 248 GQVFRYDFTTQETTPLFTI---QDS---GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDW 321 (430)
T ss_dssp TEEEEEETTTTEEEEEEEC---SSS---SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCC
T ss_pred CEEEEEECCCCcEEEEEEc---CCC---CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCC
Confidence 499999998876555431 111 1489999999999 44 2345555442210
Q ss_pred ------CCCCCCCc-cEEE--------cCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec--------
Q psy4771 188 ------GAKPQIPN-SVTV--------DSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-------- 244 (337)
Q Consensus 188 ------~~~~~~pn-~v~v--------d~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-------- 244 (337)
...+..|. ++++ |++|+|||+|.... +|.+++++ |++..+..
T Consensus 322 ~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~--------------~I~~i~~~-G~v~~~~g~g~~~~~G 386 (430)
T 3tc9_A 322 VDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH--------------CIRILTPQ-GRVTTFAGRGSNGTSG 386 (430)
T ss_dssp BCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT--------------EEEEECTT-SEEEEEEECCTTSSSS
T ss_pred CCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc--------------EEEEECCC-CcEEEEEeCCCCCCCc
Confidence 11367788 8888 46689999998643 77778764 55544432
Q ss_pred ---c-------ccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 245 ---N-------LHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 245 ---~-------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+ |..|.||+++++++.|||+|+.+++|.+++++
T Consensus 387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1 56899999999656899999999999999875
No 47
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.66 E-value=2e-15 Score=137.06 Aligned_cols=206 Identities=13% Similarity=0.108 Sum_probs=133.7
Q ss_pred CcccCccEEEee--CCeEE-EEecCcEEEEEeCC-c-eeEEEecCccc-cCccccCccCCcceEEE---CCCCcEEE-EE
Q psy4771 60 NEIHGPEAVVKH--KGDLY-MGVDGGHILKLSGG-K-LVPVVKLGKDC-YGFKYEQQCGRPLGIKF---DKNGALHV-AD 129 (337)
Q Consensus 60 g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~~-~-~~~~~~~g~~~-~~~~~~~~~~~P~Gl~~---d~~G~lyV-ad 129 (337)
.....||++.++ ++.+| ++..+++|.++++. + ...+ .+.... .+ .....|.||.+ |++|+||| ++
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g----~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNG----DGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSS----CCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccC----CCcceeeEEEEeccCCCCcEEEEEc
Confidence 345579999984 58999 78899999999984 3 2333 332100 00 11235789999 79999998 45
Q ss_pred C-------------CCcEEEEEcC---CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCC
Q psy4771 130 A-------------YFGLYKVNVT---TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQI 193 (337)
Q Consensus 130 ~-------------~~gv~~vd~~---~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~ 193 (337)
. ...|.++|+. +++....+.......+- . ...+.....
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~----------------------~----~~~g~~~~~ 138 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEF----------------------E----KKAGKRPFG 138 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHH----------------------H----HHHSSCCEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccc----------------------c----ccccccccC
Confidence 2 2348999988 66655555421111110 0 000113456
Q ss_pred CccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec------cccceeeEEEccCCCEEEEEeCC
Q psy4771 194 PNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA------NLHFANGVELSADESFVIVAETM 267 (337)
Q Consensus 194 pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~------~~~~p~gia~~~dg~~lyva~~~ 267 (337)
+||+++|++|++||+++.. .+.|+++++++........ ....+|||++.|||+.|+|+++
T Consensus 139 ~nDvavD~~GnaYVt~s~~-------------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~- 204 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALG-------------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG- 204 (334)
T ss_dssp EEEEEECTTSCEEEEEEES-------------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-
T ss_pred CceeEECCCCCEEEeCCCC-------------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-
Confidence 9999999999999999752 0489999998654443321 1334789999999999999999
Q ss_pred CCEEEEEEeeCCCCCceeeeec------CCCCCCCce-eECCCCCE-EEEecCC
Q psy4771 268 SSRVHRYYLKGPKQGKSEVFID------GLPGLPDNV-KRDSKGNF-LVSLVCP 313 (337)
Q Consensus 268 ~~~I~~~~~~g~~~~~~~~~~~------~~~g~Pdgi-~~d~dG~l-~va~~~~ 313 (337)
.++|.+|+++.. ...++-.. .+. .||+| .+..+|++ +|+....
T Consensus 205 ~g~L~~fD~~~p--v~~~v~~~~~G~~~~~~-~~dgilp~~~~G~vllV~~~~~ 255 (334)
T 2p9w_A 205 PRALTAFDVSKP--YAWPEPVKINGDFGTLS-GTEKIVTVPVGNESVLVGARAP 255 (334)
T ss_dssp SSSEEEEECSSS--SCCCEECEESSCCCCCT-TEEEEEEEEETTEEEEEEEETT
T ss_pred CCeEEEEcCCCC--cceeecccccCCccccc-CcccccccccCCEEEEEEcCCC
Confidence 999999998732 11011111 122 38995 77788986 8887544
No 48
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.66 E-value=2.7e-15 Score=137.15 Aligned_cols=184 Identities=14% Similarity=0.142 Sum_probs=126.3
Q ss_pred cCccEEEee--CCeEEEEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECC------
Q psy4771 63 HGPEAVVKH--KGDLYMGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAY------ 131 (337)
Q Consensus 63 ~~P~~i~~~--~g~ly~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~------ 131 (337)
..|.+|+++ ++.||+....+.|++++..+ .+.+.... . ......|+++++|+ +|+|||+|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~---~----~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSV---D----GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDR 152 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEE---T----TEECSCEEEEEECTTTCCEEEEESCSSCCTT
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccC---C----CCcccccceEEEecCCCEEEEECCccccccc
Confidence 369999984 78999544445599998742 22232110 0 12346799999999 9999999964
Q ss_pred ------------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEE
Q psy4771 132 ------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTV 199 (337)
Q Consensus 132 ------------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~v 199 (337)
.+|+++|++++++..+.. .+..||+|++
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------------------------------------~~~~p~gia~ 192 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLLK----------------------------------------ELHVPGGAEV 192 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEEE----------------------------------------EESCCCEEEE
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEecc----------------------------------------CCccCcceEE
Confidence 238999988787766543 2456999999
Q ss_pred cCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCC---CeeEEEeccccceeeEEEccCCCEEEEEeCC--------
Q psy4771 200 DSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT---KKNKVLIANLHFANGVELSADESFVIVAETM-------- 267 (337)
Q Consensus 200 d~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~---~~~~~~~~~~~~p~gia~~~dg~~lyva~~~-------- 267 (337)
+++|+ |||+|... ++|++|+.++ ++.+.+.. +..|+||+++++|+ |||++..
T Consensus 193 ~~dg~~lyv~d~~~--------------~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 193 SADSSFVLVAEFLS--------------HQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHG 256 (322)
T ss_dssp CTTSSEEEEEEGGG--------------TEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTS
T ss_pred CCCCCEEEEEeCCC--------------CeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccC
Confidence 99986 99999753 3888888764 23333332 22399999999995 9999976
Q ss_pred --CCEEEEEEeeCCCCCceeeeec--CC-CCCCCceeECCCCCEEEEecCC
Q psy4771 268 --SSRVHRYYLKGPKQGKSEVFID--GL-PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 268 --~~~I~~~~~~g~~~~~~~~~~~--~~-~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.++|.+|+.+|.. ...+.. +. ...|.+++. .+|+|||+....
T Consensus 257 ~~~~~v~~~d~~G~~---~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~ 303 (322)
T 2fp8_A 257 RVDPKGIKFDEFGNI---LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFH 303 (322)
T ss_dssp CEEEEEEEECTTSCE---EEEEECCTTTTTSCCCEEEE-ETTEEEEECSSC
T ss_pred CCccEEEEECCCCCE---EEEEECCCCCccccceEEEE-eCCEEEEeecCC
Confidence 5789999876431 222222 11 134778876 478999997554
No 49
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.66 E-value=9e-15 Score=138.22 Aligned_cols=179 Identities=16% Similarity=0.268 Sum_probs=128.6
Q ss_pred ceeccCcccCccEEEee--CCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEE
Q psy4771 55 EKLFENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVAD 129 (337)
Q Consensus 55 ~~~~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad 129 (337)
+.+....+..|++++++ ++.|| +|..+++|.+++. ++..... + ...+..|.||++|+. |.||++|
T Consensus 151 ~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l-~---------~~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 151 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-F---------RENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEE-E---------ECSSCCEEEEEEETTTTEEEEEE
T ss_pred eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEE-E---------eCCCCCcceEEEecccCeEEEEe
Confidence 34444456789999994 78888 9999999999987 3332221 1 134567999999984 6999999
Q ss_pred CC--CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEE
Q psy4771 130 AY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVY 206 (337)
Q Consensus 130 ~~--~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~ly 206 (337)
.. ..|.++++++...+.+... .+..|++|++|+ +++||
T Consensus 221 ~~~~~~I~~~~~dG~~~~~~~~~---------------------------------------~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGVDIYSLVTE---------------------------------------NIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp CSSSCCEEEEETTSCSCEEEECS---------------------------------------SCSCEEEEEEETTTTEEE
T ss_pred CCCCCEEEEEeCCCCccEEEEEC---------------------------------------CCCceEEEEEEeCCCEEE
Confidence 75 3599999987666655431 467899999996 56799
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec---cccceeeEEEccCCCEEEEEeCCCCEEEEEEe-eCCCCC
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA---NLHFANGVELSADESFVIVAETMSSRVHRYYL-KGPKQG 282 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~---~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~-~g~~~~ 282 (337)
|+|.... +|+++|.++...+.+.. .+..|.||+++ ++.||++++.+++|.+++. +|..
T Consensus 262 ~aD~~~~--------------~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~-- 323 (400)
T 3p5b_L 262 WVDSKLH--------------SISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD-- 323 (400)
T ss_dssp EEETTTT--------------EEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCC--
T ss_pred EEECCCC--------------EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCc--
Confidence 9998643 89999988666655554 36789999994 4479999999999999994 3432
Q ss_pred ceeeeecCCCCCCCceeECC
Q psy4771 283 KSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 283 ~~~~~~~~~~g~Pdgi~~d~ 302 (337)
..++..++. .|.+|++..
T Consensus 324 -~~~i~~~~~-~p~~i~v~~ 341 (400)
T 3p5b_L 324 -VNLLAENLL-SPEDMVLFH 341 (400)
T ss_dssp -CEEEECSCS-CEEEEEEES
T ss_pred -eEEEecCCC-CCceEEEEe
Confidence 233333332 367776643
No 50
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=5e-14 Score=128.71 Aligned_cols=220 Identities=15% Similarity=0.218 Sum_probs=146.2
Q ss_pred CccEEEe--eCCeEEEEe-c------CcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCC-
Q psy4771 64 GPEAVVK--HKGDLYMGV-D------GGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYF- 132 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~-~------~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~- 132 (337)
+|.++++ +++.+|+.. . +++|+.++..+.+.+..+ .....|.+++++++|+ +|+++...
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI----------HNDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE----------EESSCCCSEEEETTTTEEEEEETTTT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE----------ecCCCcceEEECCCCCEEEEEecCCC
Confidence 6778887 345788443 3 678999987443333222 1224589999999995 99998754
Q ss_pred cEEEEEcCCCeEEEEecccccc--CCCCCCCCCceeeCCCCCcc---c---ccceeeeccccCC------CCCCCCccEE
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEI--DGAKPQIPNSVTVDSDGQTG---Q---TEQLISMDTEIDG------AKPQIPNSVT 198 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~--~g~~~~~P~~v~~~~~g~~~---~---~~~v~~~~~~~~~------~~~~~pn~v~ 198 (337)
.|..+|.++++........... ....+..|..++++++|+.+ . .+.|..++..-.. .....|++++
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 4999999888765544321000 00111236789999999965 2 2346665522100 0234589999
Q ss_pred EcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec-----cccceeeEEEccCCCEEEEEeCCCCEEE
Q psy4771 199 VDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-----NLHFANGVELSADESFVIVAETMSSRVH 272 (337)
Q Consensus 199 vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~dg~~lyva~~~~~~I~ 272 (337)
++++|+ +|+++. ++.|+.+|..+++...... ....+.++++++||+.+|+++...+.|.
T Consensus 192 ~s~dg~~l~~~~~---------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 192 LDSEGKRLYTTNA---------------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp EETTTTEEEEECT---------------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred ECCCCCEEEEEcC---------------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence 999987 787764 2478889988887644332 2346788999999999999999889999
Q ss_pred EEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEEecCC
Q psy4771 273 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
++++...+. ... .. . +.|.+++++++|+ +|++....
T Consensus 257 ~~d~~~~~~--~~~-~~-~-~~~~~~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 257 VVDTRNGNI--LAK-VA-A-PESLAVLFNPARNEAYVTHRQA 293 (353)
T ss_dssp EEETTTCCE--EEE-EE-C-SSCCCEEEETTTTEEEEEETTT
T ss_pred EEECCCCcE--EEE-EE-c-CCCceEEECCCCCEEEEEECCC
Confidence 999854321 111 11 2 2368899999998 89988543
No 51
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.64 E-value=1.9e-14 Score=146.44 Aligned_cols=179 Identities=16% Similarity=0.250 Sum_probs=128.9
Q ss_pred ceeccCcccCccEEEee--CCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEE
Q psy4771 55 EKLFENEIHGPEAVVKH--KGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVAD 129 (337)
Q Consensus 55 ~~~~~g~~~~P~~i~~~--~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad 129 (337)
+.+....+..|++|+++ ++.|| +|..+++|.+++. |+...+. + ...+..|.||++|+. |+||++|
T Consensus 463 ~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l-~---------~~~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 463 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-F---------RENGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE-E---------ECTTCCEEEEEEETTTTEEEEEE
T ss_pred eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE-E---------eCCCCCcceEEEecCCCCEEEec
Confidence 33444467789999994 66788 9999999999987 4332221 1 133467999999986 7999999
Q ss_pred CCC--cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEE
Q psy4771 130 AYF--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVY 206 (337)
Q Consensus 130 ~~~--gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~ly 206 (337)
++. .|.++++++...+.++.. .+..|++|++|+ +|+||
T Consensus 533 ~g~~~~I~~~~~dG~~~~~lv~~---------------------------------------~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 533 WGTPAKIKKGGLNGVDIYSLVTE---------------------------------------NIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp CSSSCEEEEEETTSCCEEEEECS---------------------------------------SCSCEEEEEEETTTTEEE
T ss_pred CCCCCeEEEEecCCCceEEEEeC---------------------------------------CCCCceEEEEecCCCeEE
Confidence 764 499999987766666531 467899999995 67899
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc---ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN---LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK 283 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~ 283 (337)
|+|.... +|.+++.++...+.+... +..|.+|++. +++|||+|+..++|++++...++ .
T Consensus 574 waD~~~~--------------~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~--~ 635 (791)
T 3m0c_C 574 WVDSKLH--------------SISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS--D 635 (791)
T ss_dssp EEETTTT--------------EEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC--C
T ss_pred EEeCCCC--------------cEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCc--c
Confidence 9997643 888999876666555543 5677788774 45899999999999999853221 2
Q ss_pred eeeeecCCCCCCCceeEC
Q psy4771 284 SEVFIDGLPGLPDNVKRD 301 (337)
Q Consensus 284 ~~~~~~~~~g~Pdgi~~d 301 (337)
..++..++. .|.+|++.
T Consensus 636 ~~~l~~~l~-~P~~i~v~ 652 (791)
T 3m0c_C 636 VNLLAENLL-SPEDMVLF 652 (791)
T ss_dssp CEEEECSCS-CCCCEEEE
T ss_pred eEEeecCCC-CceeEeee
Confidence 334444333 37777764
No 52
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.63 E-value=1.5e-14 Score=138.13 Aligned_cols=186 Identities=12% Similarity=0.143 Sum_probs=125.5
Q ss_pred cccCccEEEe-eCCeEE-EEecC----cEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC
Q psy4771 61 EIHGPEAVVK-HKGDLY-MGVDG----GHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF 132 (337)
Q Consensus 61 ~~~~P~~i~~-~~g~ly-~d~~~----g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~ 132 (337)
.+..|.+|++ .+|.|| ++..+ ..++.++. +....-.. ...+..|.|+++|+ +|+|||+|...
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~----------~~~~~~P~giavd~~~G~lyv~d~~~ 249 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLS----------LCNARGAKTCAVHPQNGKIYYTRYHH 249 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEE----------EEECSSBCCCEECTTTCCEEECBTTC
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccc----------ccccCCCCEEEEeCCCCeEEEEECCC
Confidence 3457999999 566688 66533 23566654 21110000 12357799999999 78999999775
Q ss_pred c-EEEEEcCCCeE-EEEeccccccCCCCCCCCCceeeCCCCC-cc----cccceeeeccccC------------------
Q psy4771 133 G-LYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGQ-TG----QTEQLISMDTEID------------------ 187 (337)
Q Consensus 133 g-v~~vd~~~g~~-~~l~~~~~~~~g~~~~~P~~v~~~~~g~-~~----~~~~v~~~~~~~~------------------ 187 (337)
+ |+++|++++.+ ..+... ... ..+.+++++++|+ ++ ....|..++....
T Consensus 250 ~~V~~~d~~~g~~~~~~~~~----~~~--~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g 323 (433)
T 4hw6_A 250 AMISSYDPATGTLTEEEVMM----DTK--GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPG 323 (433)
T ss_dssp SEEEEECTTTCCEEEEEEEC----SCC--SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCC
T ss_pred CEEEEEECCCCeEEEEEecc----CCC--CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCc
Confidence 4 99999987776 444431 111 1355699999999 44 2345655441100
Q ss_pred -------CCCCCCCccEEE---------cCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec-------
Q psy4771 188 -------GAKPQIPNSVTV---------DSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA------- 244 (337)
Q Consensus 188 -------~~~~~~pn~v~v---------d~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~------- 244 (337)
...+..|+++++ |++|+|||+|.... +|.+++++ |.+..+..
T Consensus 324 ~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~--------------~I~~~~~~-G~v~t~~G~g~~~~~ 388 (433)
T 4hw6_A 324 WVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH--------------TVRVLTPE-GRVTTYAGRGNSREW 388 (433)
T ss_dssp CBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT--------------EEEEECTT-SEEEEEECCCTTCSS
T ss_pred cCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC--------------EEEEECCC-CCEEEEEeCCCCCcc
Confidence 013678999999 89999999998743 67777763 45444331
Q ss_pred -----------cccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 245 -----------NLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 245 -----------~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
.|..|.|||+++++..|||+|+.+++|.+++++
T Consensus 389 G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 389 GYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 256799999994444899999999999999874
No 53
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=2.4e-14 Score=131.37 Aligned_cols=185 Identities=15% Similarity=0.188 Sum_probs=131.2
Q ss_pred cCccEEEe-eCCeEE-EEecCcEEEEEeCCceeEE--EecCccccCccccCccCCcceEEECCCCcEEEEEC--CCcEEE
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDGGHILKLSGGKLVPV--VKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADA--YFGLYK 136 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~g~I~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~--~~gv~~ 136 (337)
..|.++++ .++.+| ++..+++|.++|..+.+.. ...+.. ......|.+|++ .+++|||++. ...|..
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILK 156 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc------cccCCCcceEEE-ECCEEEEEcCCCCCEEEE
Confidence 57999999 788999 5548899999998443322 222210 012237999999 5679999986 245999
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cc----------cceeeecccc-------CCCCCCCCc
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QT----------EQLISMDTEI-------DGAKPQIPN 195 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~----------~~v~~~~~~~-------~~~~~~~pn 195 (337)
+|++++++..... . +. .|.+++++++|+++ .. +.|..++... .-.....|+
T Consensus 157 iD~~t~~~~~~i~----~-g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 157 IDTETDKVVDELT----I-GI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp EETTTTEEEEEEE----C-SS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred EECCCCeEEEEEE----c-CC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 9999887665543 1 22 48999999999987 11 4577776321 101124799
Q ss_pred cEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEE--Eec-cccceeeEEEccCCCEEEEEe----CC
Q psy4771 196 SVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKV--LIA-NLHFANGVELSADESFVIVAE----TM 267 (337)
Q Consensus 196 ~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~--~~~-~~~~p~gia~~~dg~~lyva~----~~ 267 (337)
+++++++|+ +|+++. .|+++|++++++.. ... +...|.||+++|+++.|||++ ..
T Consensus 229 ~la~~~d~~~lyv~~~-----------------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~ 291 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN-----------------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQ 291 (328)
T ss_dssp EEEECTTSCEEEEESS-----------------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSS
T ss_pred eEEEecCCCEEEEEcc-----------------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccccc
Confidence 999999765 888763 68889988776521 111 246899999999777899999 78
Q ss_pred CCEEEEEEeeCC
Q psy4771 268 SSRVHRYYLKGP 279 (337)
Q Consensus 268 ~~~I~~~~~~g~ 279 (337)
.++|.+|+.+|.
T Consensus 292 ~~~V~v~d~~g~ 303 (328)
T 3dsm_A 292 QGIVYRYSPQGK 303 (328)
T ss_dssp EEEEEEECTTCC
T ss_pred CCEEEEECCCCC
Confidence 899999998743
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=1e-13 Score=127.94 Aligned_cols=215 Identities=12% Similarity=0.144 Sum_probs=137.5
Q ss_pred CcccCccEEEe-eCCeEE-EEec-----CcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEE
Q psy4771 60 NEIHGPEAVVK-HKGDLY-MGVD-----GGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVAD 129 (337)
Q Consensus 60 g~~~~P~~i~~-~~g~ly-~d~~-----~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad 129 (337)
+.+..|.+|++ .++.|| +|.. .++|++++. ++......++... ......|+++++|++ |.+||+|
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~-----~~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI-----TLSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT-----SCTTCCCCEEEEETTTTEEEEEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh-----cccccccceEEEecCCCEEEEEc
Confidence 34568999999 578899 7876 589999996 4433222232110 122356899999975 6999999
Q ss_pred C---C-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCCCCCCCCccEEEcC
Q psy4771 130 A---Y-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDGAKPQIPNSVTVDS 201 (337)
Q Consensus 130 ~---~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~~~~~~pn~v~vd~ 201 (337)
. . ++|+++|+++++..++.... .+ ..|....+..+|+.+ ..+.+.. -...+|+|++++
T Consensus 139 ~~~~~~~~i~v~d~~~g~~~r~~~~~---~~---~~~~~~~~~~~g~~~~~~~~~g~~~~--------~~~~~~gia~s~ 204 (343)
T 2qe8_A 139 PAPDDKAALIRVDLQTGLAARVLQGY---PG---IAPEDIDLVIDGVPVQIGQPDGTVIR--------PHLGVNGIVLDA 204 (343)
T ss_dssp CCSGGGCEEEEEETTTCCEEEECTTC---TT---TSCCSCCCEETTEECBEECTTSCEEC--------CCCCEEEEEECT
T ss_pred CccCCCCeEEEEECCCCCEEEEecCC---Cc---ccccccceeECCEEEEeccCCCceec--------eecccceeEecc
Confidence 7 4 46999999888776654310 00 012212222233222 0111100 113589999999
Q ss_pred CCc-EEEEcCCCCccCceeeeeecCCccEEEEcCC---CCe---------eEEEeccccceeeEEEccCCCEEEEEeCCC
Q psy4771 202 DGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK---TKK---------NKVLIANLHFANGVELSADESFVIVAETMS 268 (337)
Q Consensus 202 ~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~---~~~---------~~~~~~~~~~p~gia~~~dg~~lyva~~~~ 268 (337)
||+ ||+++.... +|++++.+ .+. +. .......|+||+++++| .|||++...
T Consensus 205 dg~~ly~~~~~~~--------------~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G-~l~va~~~~ 268 (343)
T 2qe8_A 205 ENEWLYLSPMHST--------------SMYRIKSADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDH-NIYVGDLAH 268 (343)
T ss_dssp TSCEEEEEESSCS--------------EEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTC-CEEEEEGGG
T ss_pred CCCEEEEEeCCCC--------------eEEEEEHHHhcCCCCChhhhhcceE-ecccCCCCceEEECCCC-CEEEEccCC
Confidence 995 999987633 77777632 110 11 11223479999999998 599999999
Q ss_pred CEEEEEEe-eCCCCCceeeeecCC-CCCCCceeECCCCCEEEEecCC
Q psy4771 269 SRVHRYYL-KGPKQGKSEVFIDGL-PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 269 ~~I~~~~~-~g~~~~~~~~~~~~~-~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
++|.+++. +| +...+.... -..|++++++++|++||+....
T Consensus 269 ~~V~~~d~~~G----~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 269 SAIGVITSADR----AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TEEEEEETTTT----EEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CeEEEEECCCC----CEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 99999997 43 233443311 2359999999999999998644
No 55
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=3.2e-13 Score=121.35 Aligned_cols=182 Identities=10% Similarity=0.131 Sum_probs=127.5
Q ss_pred cCccEEEe-eCCeEE-EEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEEC--------
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADA-------- 130 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~-------- 130 (337)
..|.++++ .+|.+| ++..+++|.+++. ++...+... . ......+|+++++|++|++|++|.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~--~-----~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADS--F-----EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPE 141 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE--E-----TTEECCCCCCEEECTTSCEEEEECSHHHHCGG
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec--c-----CCCCCCCCCCEEECCCCCEEEECCcccccccc
Confidence 46888998 678888 5556689999986 444333211 0 012346789999999999999874
Q ss_pred ----------CCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccC---------
Q psy4771 131 ----------YFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEID--------- 187 (337)
Q Consensus 131 ----------~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~--------- 187 (337)
..+|++++++ +++..+... . ..|.+++++++|+++ ..+.|..++...+
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~----~----~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPD-GTLSAPIRD----R----VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTT-SCEEEEECC----C----SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEE
T ss_pred ccccccccCCCcEEEEECCC-CCEEEeecC----C----CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeE
Confidence 1369999987 666655431 1 148899999999986 2245555442111
Q ss_pred -CCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEE-ccCCCEEEEEe
Q psy4771 188 -GAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVEL-SADESFVIVAE 265 (337)
Q Consensus 188 -~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~-~~dg~~lyva~ 265 (337)
......|+++++|++|++|+++. ++|.+||+++.....+..... |..+++ ++|++.||++.
T Consensus 213 ~~~~~~~p~~i~~d~~G~l~v~~~----------------~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 213 FTVEPGKTDGLRVDAGGLIWASAG----------------DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp ECCSSSCCCSEEEBTTSCEEEEET----------------TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred eeCCCCCCCeEEECCCCCEEEEcC----------------CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 11345789999999999999882 289999998554444443334 899999 58999999998
Q ss_pred CCCCEEEEEEeeCC
Q psy4771 266 TMSSRVHRYYLKGP 279 (337)
Q Consensus 266 ~~~~~I~~~~~~g~ 279 (337)
. +.+++++++..
T Consensus 276 ~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 276 S--TEFWSIETNVR 287 (296)
T ss_dssp T--TEEEEEECSCC
T ss_pred C--CeEEEEEcccc
Confidence 5 58999998654
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=5.6e-13 Score=122.13 Aligned_cols=228 Identities=13% Similarity=0.125 Sum_probs=141.9
Q ss_pred ccCccEEEe-eCCeEE-EEec--CcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCc-
Q psy4771 62 IHGPEAVVK-HKGDLY-MGVD--GGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFG- 133 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly-~d~~--~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~g- 133 (337)
...|.++++ .+|.|| ++.. ++.|+.|+. ++.+.+..+. .....|.+++++++|+ ||+++...+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~---------~~~~~p~~~a~spdg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV---------APGTPPAYVAVDEARQLVYSANYHKGT 109 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE---------EESCCCSEEEEETTTTEEEEEETTTTE
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee---------cCCCCCEEEEECCCCCEEEEEeCCCCE
Confidence 357999999 677788 4443 578888764 4444333211 2246799999999995 888875444
Q ss_pred EEEEEcC-CCeEEEEeccccccCCCC------CCCCCceeeCCCCCcc----cccceeeeccccCC----------CCCC
Q psy4771 134 LYKVNVT-TGQTEQLISMDTEIDGAK------PQIPNSVTVDSDGQTG----QTEQLISMDTEIDG----------AKPQ 192 (337)
Q Consensus 134 v~~vd~~-~g~~~~l~~~~~~~~g~~------~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~----------~~~~ 192 (337)
+..++.+ ++....+... ...+.. ...|+.++++++|+++ ..+.|..++....+ ....
T Consensus 110 v~v~~~~~~g~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTV--QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEECTTSCEEEEEEE--ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EEEEEeCCCCCeeeccee--ecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 6666653 4555444321 111110 0135679999999965 23445444422111 1234
Q ss_pred CCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec--c-------ccceeeEEEccCCCEEE
Q psy4771 193 IPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA--N-------LHFANGVELSADESFVI 262 (337)
Q Consensus 193 ~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~--~-------~~~p~gia~~~dg~~ly 262 (337)
.|+++++++||+ +|+++.... .-.++.++..+++.+.+.. . ...|.+++++|||++||
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~------------~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSS------------QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTT------------EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEE
T ss_pred CCceEEECCCCCEEEEEeCCCC------------EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEE
Confidence 688899999998 898876532 1145555554565433221 1 14588999999999999
Q ss_pred EEeCCCCEEEEEEeeCC-CCCceeeeecCCCCCCCceeECCCCC-EEEEecCC
Q psy4771 263 VAETMSSRVHRYYLKGP-KQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 263 va~~~~~~I~~~~~~g~-~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
+++...++|.+|+++.. .......+.. ....|.++++++||+ +|++....
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEETTT
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEEcCC
Confidence 99998999999998632 1111111111 123589999999997 88887653
No 57
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=1.2e-12 Score=119.46 Aligned_cols=222 Identities=14% Similarity=0.137 Sum_probs=148.8
Q ss_pred CccEEEe-eC-CeEE-EEecCcEEEEEeCCceeEEE--ecCccccCccccCccCCcceEEECCCC-cEEEEECC--CcEE
Q psy4771 64 GPEAVVK-HK-GDLY-MGVDGGHILKLSGGKLVPVV--KLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY--FGLY 135 (337)
Q Consensus 64 ~P~~i~~-~~-g~ly-~d~~~g~I~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~--~gv~ 135 (337)
.|.++++ .+ +.+| ++..++.|..++..+.+.+. ..+.... ........|.+++++++| .+|+++.. ..|+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR--TEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC--CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc--ccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 5788888 44 4588 67778999999974332222 2211100 000111247899999998 58998743 3499
Q ss_pred EEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccc-------cCC---CCCCCCccEEEcC
Q psy4771 136 KVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTE-------IDG---AKPQIPNSVTVDS 201 (337)
Q Consensus 136 ~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~-------~~~---~~~~~pn~v~vd~ 201 (337)
.+|.++++...... ..+. .|..++++++|+.+ ..+.+..++.. +.. .....++++++++
T Consensus 168 ~~d~~~~~~~~~~~----~~~~---~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQ----NTGK---MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp EEETTTTEEEEEEC----CCCT---TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred EEcCCCCceEEEec----CCCC---ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 99998887765543 1222 37889999999976 33455554411 000 1233567899999
Q ss_pred CCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCC
Q psy4771 202 DGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPK 280 (337)
Q Consensus 202 ~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~ 280 (337)
+|+ +|+++.. .+.|+.+|..+++...... ...+.++++++||+++|+++...++|.+++.+..
T Consensus 241 dg~~l~~~~~~--------------~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~- 304 (353)
T 3vgz_A 241 ARQRAFITDSK--------------AAEVLVVDTRNGNILAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY- 304 (353)
T ss_dssp TTTEEEEEESS--------------SSEEEEEETTTCCEEEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT-
T ss_pred CCCEEEEEeCC--------------CCEEEEEECCCCcEEEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCCC-
Confidence 987 8888754 3489999998887644333 3457889999999999999999999999997543
Q ss_pred CCceeeeecCCCCCCCceeECCCCC-EEEEecCC
Q psy4771 281 QGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 281 ~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
+...... .+..|.++++++||+ +||+....
T Consensus 305 --~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 305 --KVVKTFD-TPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp --EEEEEEE-CCSEEEEEEECTTSCEEEEEEECC
T ss_pred --eEEEEEe-cCCCCCeEEEcCCCCEEEEEEccc
Confidence 2211122 334689999999998 99998765
No 58
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.53 E-value=4.8e-12 Score=116.60 Aligned_cols=247 Identities=12% Similarity=0.110 Sum_probs=155.9
Q ss_pred cCceeccCcccCccEEEe-eCCeEEEEec-CcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC----Cc
Q psy4771 53 NAEKLFENEIHGPEAVVK-HKGDLYMGVD-GGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN----GA 124 (337)
Q Consensus 53 ~~~~~~~g~~~~P~~i~~-~~g~ly~d~~-~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~----G~ 124 (337)
.++.+++| +..|.+|++ .+|.+|+... .|+|++++. ++...+..+..- .....+.|+||+++|+ |.
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v-----~~~g~~GllGia~~Pdf~~~g~ 96 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV-----SPSGEGGLLGIALSPDYASDHM 96 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-----CCBTTBSEEEEEECTTHHHHCE
T ss_pred eeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce-----eecCCCCceeeEeccccccCCE
Confidence 45666665 679999999 7888996666 899999986 333333322110 0122356999999984 89
Q ss_pred EEEEEC---CCcEEEEEcCCC--------eEEEEeccccccCCCCCCCCCceeeCCCCCcc-c----------------c
Q psy4771 125 LHVADA---YFGLYKVNVTTG--------QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-Q----------------T 176 (337)
Q Consensus 125 lyVad~---~~gv~~vd~~~g--------~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-~----------------~ 176 (337)
|||+.+ .+.|.++..+++ ..+.+... ...........|++++||+++ + .
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~---~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~ 173 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRG---IPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLG 173 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEE---ECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCST
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEc---CCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCC
Confidence 999853 245888876542 12333321 111111246779999999987 1 2
Q ss_pred cceeeeccccC--------C-----CCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCC------C
Q psy4771 177 EQLISMDTEID--------G-----AKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT------K 237 (337)
Q Consensus 177 ~~v~~~~~~~~--------~-----~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~------~ 237 (337)
+.|..+..+.. + ..+..|.+++++++|+||++|.+.+..+-+..+ ..|.-|-+-... +
T Consensus 174 G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i---~~G~nyGwP~~~g~~~~~~ 250 (347)
T 3das_A 174 GKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAI---KPGDNYGWPEAEGKGGGSG 250 (347)
T ss_dssp TCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEE---CTTCBCCTTTCCSSCCCTT
T ss_pred CEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEE---cCCCEecCCcccCCCCCcc
Confidence 46666653322 1 145679999999999999999876431111111 111111000000 0
Q ss_pred e---eEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCC-CCceeeeecCCCCCCCceeECCCCCEEEEecCC
Q psy4771 238 K---NKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPK-QGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 238 ~---~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~-~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
. +..+......|.||++. +| .+|+++....+|+++.+++.. .+..+.|..+..+.|.++++++||.|||+....
T Consensus 251 ~~~P~~~~~~~~~ap~G~~~~-~g-~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 251 FHDPVAQWSTDEASPSGIAYA-EG-SVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp CCCCSEEECTTTCCEEEEEEE-TT-EEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTT
T ss_pred ccCCcEecCCCCCCCcceEEE-cC-ceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCC
Confidence 0 00111112478999998 44 699999999999999998653 344566666556789999999999999998755
No 59
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=3.7e-13 Score=121.49 Aligned_cols=182 Identities=16% Similarity=0.142 Sum_probs=124.3
Q ss_pred CccEEEe-eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC---------
Q psy4771 64 GPEAVVK-HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY--------- 131 (337)
Q Consensus 64 ~P~~i~~-~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~--------- 131 (337)
.|.++++ .+|.+|+.. +++|++++. ++.+.+..... .....+|+++++|++|++|+++..
T Consensus 55 ~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~-------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 55 PVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDN-------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp CEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCT-------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred ceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCC-------CCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 5778888 677888666 567999986 44444432211 123467999999999999999732
Q ss_pred ---CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEE
Q psy4771 132 ---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYW 207 (337)
Q Consensus 132 ---~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyv 207 (337)
.+|++++++ ++...+.. .+..||++++++||+ +|+
T Consensus 127 ~~~~~l~~~d~~-g~~~~~~~----------------------------------------~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 127 RHQGALYSLFPD-HHVKKYFD----------------------------------------QVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp TTCEEEEEECTT-SCEEEEEE----------------------------------------EESBEEEEEECTTSCEEEE
T ss_pred CCCcEEEEEECC-CCEEEEee----------------------------------------ccccccceEEcCCCCEEEE
Confidence 248889876 44444432 244689999999996 999
Q ss_pred EcCCCCccCceeeeeecCCccEEEEcC--CCCeeE---EEe---ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC
Q psy4771 208 SDSSTKYKSGLFEGLTSGSGRLIQYNP--KTKKNK---VLI---ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 208 td~~~~~~~~~~~~~~~~~G~v~~~d~--~~~~~~---~~~---~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~ 279 (337)
++... ++|++++. .+|+.. .+. .....|.|++++++| .|||+....++|.+|+++.+
T Consensus 166 ~~~~~--------------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 166 IDSLS--------------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEGGG--------------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTC
T ss_pred ecCCC--------------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCc
Confidence 98753 36766653 555432 222 123579999999999 59999999999999998622
Q ss_pred CCCceeeeecCCC-CCCCceeEC-CCCC-EEEEecCC
Q psy4771 280 KQGKSEVFIDGLP-GLPDNVKRD-SKGN-FLVSLVCP 313 (337)
Q Consensus 280 ~~~~~~~~~~~~~-g~Pdgi~~d-~dG~-l~va~~~~ 313 (337)
+ ....+. .| ..|.++++. ++++ |||+....
T Consensus 231 ~---~~~~i~-~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 K---RLQTVK-LPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp C---EEEEEE-CSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred e---EEEEEE-CCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 1 211122 23 358899997 6664 99999755
No 60
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.53 E-value=6.7e-13 Score=120.42 Aligned_cols=189 Identities=13% Similarity=0.109 Sum_probs=124.4
Q ss_pred CccEEEe-eCCeEE-EEecC--cEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEE
Q psy4771 64 GPEAVVK-HKGDLY-MGVDG--GHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYK 136 (337)
Q Consensus 64 ~P~~i~~-~~g~ly-~d~~~--g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~ 136 (337)
.|.++++ .+|.+| ++..+ .+|++++. ++...+... .....|.|++..+++++|++|... .|++
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~----------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~ 142 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL----------PDAIFLNGITPLSDTQYLTADSYRGAIWL 142 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC----------TTCSCEEEEEESSSSEEEEEETTTTEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC----------CCccccCcccccCCCcEEEEECCCCeEEE
Confidence 5889998 677888 66543 36999874 455444322 123568899988888999999754 4999
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC-cEEEEcCCCCcc
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSSTKYK 215 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G-~lyvtd~~~~~~ 215 (337)
+|+.+++.+............ ....+..||+| +++| .||++|...+
T Consensus 143 ~d~~~~~~~v~~~~~~~~~~~-----------------------------~~~~~~~pngi--s~dg~~lyv~d~~~~-- 189 (306)
T 2p4o_A 143 IDVVQPSGSIWLEHPMLARSN-----------------------------SESVFPAANGL--KRFGNFLYVSNTEKM-- 189 (306)
T ss_dssp EETTTTEEEEEEECGGGSCSS-----------------------------TTCCSCSEEEE--EEETTEEEEEETTTT--
T ss_pred EeCCCCcEeEEEECCcccccc-----------------------------ccCCCCcCCCc--CcCCCEEEEEeCCCC--
Confidence 998766433321100000000 00135679998 6665 6999998643
Q ss_pred CceeeeeecCCccEEEEcCCC-Cee---EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec-C
Q psy4771 216 SGLFEGLTSGSGRLIQYNPKT-KKN---KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID-G 290 (337)
Q Consensus 216 ~~~~~~~~~~~G~v~~~d~~~-~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~-~ 290 (337)
+|++|+.+. ++. +.+ ..+..|.||++++|| .|||++...++|.+|+.+|. ...... .
T Consensus 190 ------------~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~----~~~~~~~~ 251 (306)
T 2p4o_A 190 ------------LLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRS----TTIIAQAE 251 (306)
T ss_dssp ------------EEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCC----EEEEECGG
T ss_pred ------------EEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCC----EEEEeecc
Confidence 788888764 332 222 234689999999999 59999999999999987542 211111 1
Q ss_pred CC-CCCCceeEC---CCC-CEEEEecCC
Q psy4771 291 LP-GLPDNVKRD---SKG-NFLVSLVCP 313 (337)
Q Consensus 291 ~~-g~Pdgi~~d---~dG-~l~va~~~~ 313 (337)
.+ ..|.+++++ ++| +|||+....
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cccCCceEEEEecccCCCCEEEEECCCC
Confidence 22 359999998 675 699999765
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=7.7e-13 Score=119.13 Aligned_cols=184 Identities=18% Similarity=0.182 Sum_probs=124.6
Q ss_pred cCccEEEe-eC-CeEEEEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-------
Q psy4771 63 HGPEAVVK-HK-GDLYMGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF------- 132 (337)
Q Consensus 63 ~~P~~i~~-~~-g~ly~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~------- 132 (337)
..|.++++ .+ +.+|+....++|++++.. +...+. .... .......|.++++|++|++||++...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~--~~~~----~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIA--KKDS----EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECC--SBCT----TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEE--eccC----CCccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 46888988 56 899955555579999874 322110 1100 01223568999999999999998643
Q ss_pred ---------cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEc---
Q psy4771 133 ---------GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVD--- 200 (337)
Q Consensus 133 ---------gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd--- 200 (337)
+|++++++ ++...+.. ....|++++++
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~----------------------------------------~~~~~~~i~~~~~~ 183 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQMIQVDT----------------------------------------AFQFPNGIAVRHMN 183 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SCEEEEEE----------------------------------------EESSEEEEEEEECT
T ss_pred cccccCCCCeEEEECCC-CCEEEecc----------------------------------------CCCCcceEEEeccc
Confidence 58999887 65554432 13457899999
Q ss_pred -CCC-cEEEEcCCCCccCceeeeeecCCccEEEEcCC-CCeeE---EEe--c-cc-cceeeEEEccCCCEEEEEeCCCCE
Q psy4771 201 -SDG-MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TKKNK---VLI--A-NL-HFANGVELSADESFVIVAETMSSR 270 (337)
Q Consensus 201 -~~G-~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~~~~---~~~--~-~~-~~p~gia~~~dg~~lyva~~~~~~ 270 (337)
++| .+|+++... ++|+++|.+ +++.. ... . .. ..|++++++++| .|||++...++
T Consensus 184 d~dg~~l~v~~~~~--------------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~~ 248 (314)
T 1pjx_A 184 DGRPYQLIVAETPT--------------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSH 248 (314)
T ss_dssp TSCEEEEEEEETTT--------------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTE
T ss_pred CCCCCEEEEEECCC--------------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC-CEEEEEcCCCE
Confidence 998 599998653 367777754 34321 111 1 11 579999999999 59999988899
Q ss_pred EEEEEee-CCCCCceeeeecCCCCCCCceeECCCCC-EEEEecC
Q psy4771 271 VHRYYLK-GPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 271 I~~~~~~-g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
|.+|+.+ +... ..+.. ....|.+++++++|+ +|++...
T Consensus 249 i~~~d~~~g~~~---~~~~~-~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 249 IEVFGPDGGQPK---MRIRC-PFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EEEECTTCBSCS---EEEEC-SSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCCcEe---EEEeC-CCCCceeEEECCCCCEEEEEeCC
Confidence 9999976 3221 22221 114689999999998 9999865
No 62
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.52 E-value=1.2e-12 Score=118.55 Aligned_cols=178 Identities=12% Similarity=0.162 Sum_probs=124.8
Q ss_pred CccEEEe-eCCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEEC----------
Q psy4771 64 GPEAVVK-HKGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADA---------- 130 (337)
Q Consensus 64 ~P~~i~~-~~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~---------- 130 (337)
.|.++++ .+|.+| ++..+++|.+++. ++...+.... .......|++++++++|++|++|.
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~-------~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRY-------AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEE-------TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGS
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEecc-------CCCccCCCCCEEECCCCCEEEeCcCCCccccccc
Confidence 5788888 678899 5556688999987 4443332110 012346799999999999999873
Q ss_pred --------CCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cc------cceeeeccc-------
Q psy4771 131 --------YFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QT------EQLISMDTE------- 185 (337)
Q Consensus 131 --------~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~------~~v~~~~~~------- 185 (337)
..+|+++|+++++++.+. . . ..|+++++++||+.+ +. ..|..++..
T Consensus 160 ~~~~~~~~~~~v~~~d~~~g~~~~~~-~---~-----~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~ 230 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDGSPLQRMA-D---L-----DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDR 230 (305)
T ss_dssp CCCCCSSSCEEEEEECSSSCCCEEEE-E---E-----SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEE
T ss_pred cccccccCCCeEEEEcCCCCcEEEEe-c---C-----CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCC
Confidence 135999999888776654 1 1 148899999999854 22 456555422
Q ss_pred --cCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEE
Q psy4771 186 --IDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIV 263 (337)
Q Consensus 186 --~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv 263 (337)
+.......|+++++|++|+||+++.. .|++|++++.....+... ..+..+++++|++.||+
T Consensus 231 ~~~~~~~~~~pdgi~~d~~G~lwv~~~~----------------gv~~~~~~g~~~~~~~~~-~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 231 RHFASVPDGLPDGFCVDRGGWLWSSSGT----------------GVCVFDSDGQLLGHIPTP-GTASNCTFDQAQQRLFI 293 (305)
T ss_dssp EEEECCSSSCCCSEEECTTSCEEECCSS----------------EEEEECTTSCEEEEEECS-SCCCEEEECTTSCEEEE
T ss_pred eEEEECCCCCCCeEEECCCCCEEEecCC----------------cEEEECCCCCEEEEEECC-CceeEEEEeCCCCEEEE
Confidence 11112457899999999999998732 699999975554444322 36889999999999999
Q ss_pred EeCCCCEEEEEEe
Q psy4771 264 AETMSSRVHRYYL 276 (337)
Q Consensus 264 a~~~~~~I~~~~~ 276 (337)
+.. +.++++++
T Consensus 294 t~~--~~l~~~~~ 304 (305)
T 3dr2_A 294 TGG--PCLWMLPL 304 (305)
T ss_dssp EET--TEEEEEEC
T ss_pred EcC--CeEEEEEC
Confidence 985 58888874
No 63
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=7.3e-13 Score=127.31 Aligned_cols=168 Identities=10% Similarity=0.112 Sum_probs=114.9
Q ss_pred ccCccEEEe-e-CCeEE-EEecCcEEEEEeCC-------cee--------------EEEecCccccCccccCccCCcceE
Q psy4771 62 IHGPEAVVK-H-KGDLY-MGVDGGHILKLSGG-------KLV--------------PVVKLGKDCYGFKYEQQCGRPLGI 117 (337)
Q Consensus 62 ~~~P~~i~~-~-~g~ly-~d~~~g~I~~~~~~-------~~~--------------~~~~~g~~~~~~~~~~~~~~P~Gl 117 (337)
+.+|.++++ . ++.|| ++..+++|+|++.. ... .+... .....|.+|
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~----------~~~~~p~~i 315 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI----------ADPSWEFQI 315 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC----------SSSSCCEEE
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec----------CCCCCceEE
Confidence 347999999 3 68888 89999999999864 111 11111 223568999
Q ss_pred EECCCCc-EEEEECC-CcEEEEEcCC--CeE---EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 118 KFDKNGA-LHVADAY-FGLYKVNVTT--GQT---EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 118 ~~d~~G~-lyVad~~-~gv~~vd~~~--g~~---~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
+++++|+ |||+|.. +.|++++.++ +.+ ..++... ...|.. .+ ......
T Consensus 316 a~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~~G~~----DG--------------------~~~~a~ 370 (496)
T 3kya_A 316 FIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQSGYR----DD--------------------VGTEAR 370 (496)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TBCCCB----CC--------------------BGGGCB
T ss_pred EEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CCCccc----CC--------------------cccccc
Confidence 9999997 8999976 4599987653 333 3444320 011110 00 011235
Q ss_pred CCCCc-cEEEc-------CCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec------------------
Q psy4771 191 PQIPN-SVTVD-------SDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA------------------ 244 (337)
Q Consensus 191 ~~~pn-~v~vd-------~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~------------------ 244 (337)
++.|. +++++ ++|+|||+|.... +|.+++++ |.+..++.
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~--------------rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG 435 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNF--------------CVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDG 435 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGT--------------EEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCC--------------EEEEEeCC-CCEEEEecccccccccCccccccCCC
Confidence 88999 78887 6789999998743 67777753 45444431
Q ss_pred ------cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC
Q psy4771 245 ------NLHFANGVELSADESFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 245 ------~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~ 279 (337)
.|..|.|||+++++..|||+|+.++||+++++++.
T Consensus 436 ~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 436 DLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 25679999999974489999999999999999764
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=4.9e-12 Score=115.82 Aligned_cols=182 Identities=15% Similarity=0.146 Sum_probs=119.3
Q ss_pred cCCcceEEECCCCcEEEEECC---CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----cccceeee
Q psy4771 111 CGRPLGIKFDKNGALHVADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQLISM 182 (337)
Q Consensus 111 ~~~P~Gl~~d~~G~lyVad~~---~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~v~~~ 182 (337)
...|.+++++++|+||+++.. ..|+.++.++++.+.+.... ..+. .|..+++++||+.+ ..+.+..+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--~~~~---~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV--APGT---PPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE--EESC---CCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee--cCCC---CCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 367999999999999998753 35888888777766554311 1122 48999999999966 12334443
Q ss_pred ccccCCC------------------CCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCC-CCeeEEEe
Q psy4771 183 DTEIDGA------------------KPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TKKNKVLI 243 (337)
Q Consensus 183 ~~~~~~~------------------~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~~~~~~~ 243 (337)
+...++. ....+++++++++|++|+++...+ .|+.|+.+ +++.....
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~--------------~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD--------------KVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT--------------EEEEEEECTTSCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC--------------EEEEEEECCCCcEEEee
Confidence 3211110 112467899999999999887532 55555544 45443221
Q ss_pred ----ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC--CCCceeeeecCCC------CCCCceeECCCCC-EEEEe
Q psy4771 244 ----ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGP--KQGKSEVFIDGLP------GLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 244 ----~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~--~~~~~~~~~~~~~------g~Pdgi~~d~dG~-l~va~ 310 (337)
.....|++++++|||++||+++...++|.+++++.. .......+.. .+ ..|.++++++||+ +|++.
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT-IPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES-SCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee-cCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 223478999999999999999999999999998742 1111111111 22 2367799999998 78887
Q ss_pred cC
Q psy4771 311 VC 312 (337)
Q Consensus 311 ~~ 312 (337)
..
T Consensus 259 ~~ 260 (347)
T 3hfq_A 259 RG 260 (347)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.48 E-value=1.5e-11 Score=111.49 Aligned_cols=208 Identities=13% Similarity=0.139 Sum_probs=136.6
Q ss_pred eCCeEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCC-cEEEEEcCCCeE-
Q psy4771 71 HKGDLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYF-GLYKVNVTTGQT- 144 (337)
Q Consensus 71 ~~g~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~-gv~~vd~~~g~~- 144 (337)
..+.+| ++..+++|..|+.. +.......+ ...| +++++++|+ +|+++... .|+.+|.++++.
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-----------~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLG-----------YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECC-----------CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEcc-----------CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 356778 88888999999863 332222211 2346 999999995 89998643 599999988875
Q ss_pred EEEeccccccCCCCCCCCCc-eeeCCCCCcc---ccc----ceeeeccccCC-----CCCCCCccEEEcCCCc-EEEEcC
Q psy4771 145 EQLISMDTEIDGAKPQIPNS-VTVDSDGQTG---QTE----QLISMDTEIDG-----AKPQIPNSVTVDSDGM-VYWSDS 210 (337)
Q Consensus 145 ~~l~~~~~~~~g~~~~~P~~-v~~~~~g~~~---~~~----~v~~~~~~~~~-----~~~~~pn~v~vd~~G~-lyvtd~ 210 (337)
..... .+. .|.. ++++++|+.+ ..+ .|..++..... .....|++++++++|+ +|+++.
T Consensus 76 ~~~~~-----~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 76 VVAIQ-----EGQ---SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEEEE-----ECS---SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred EEecc-----cCC---CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec
Confidence 33322 111 3788 9999999976 222 45555422110 1235679999999996 998876
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCee----EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc-ee
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKN----KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK-SE 285 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~----~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~-~~ 285 (337)
... . .-.+|.++.. +.. .........|.+++++|||+++|++....++|.+++++..+... ..
T Consensus 148 ~~~---~--------~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~ 215 (331)
T 3u4y_A 148 SSA---N--------TVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLN 215 (331)
T ss_dssp TTT---T--------EEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred CCC---c--------eEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceee
Confidence 522 0 0134444432 222 12223445799999999999999999999999999987543311 22
Q ss_pred eeecCCCCCCCceeECCCCC-EEEEecC
Q psy4771 286 VFIDGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 286 ~~~~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
.+. ....|.++++++||+ +|++...
T Consensus 216 ~~~--~~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 216 AVG--TNNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp EEE--CSSCCCCEEECTTSSEEEEECSS
T ss_pred ecc--CCCCCceEEECCCCCEEEEEEcC
Confidence 222 235689999999998 8887653
No 66
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.48 E-value=2.3e-13 Score=137.38 Aligned_cols=177 Identities=16% Similarity=0.206 Sum_probs=121.5
Q ss_pred CcccCccEEEe--eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCC-CcEEEEECCC--
Q psy4771 60 NEIHGPEAVVK--HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYF-- 132 (337)
Q Consensus 60 g~~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~-- 132 (337)
..+..|++|++ .++.|| ++..+++|.+++.. +.... .+ ......|.||++|+. |+||++|...
T Consensus 450 ~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~-l~---------~~~~~~P~giavDp~~g~ly~td~~~~~ 519 (699)
T 1n7d_A 450 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-LF---------REQGSKPRAIVVDPVHGFMYWTDWGTPA 519 (699)
T ss_dssp SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE-EC---------CCSSCCCCCEECCSSSSCCEECCCSSSC
T ss_pred CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE-EE---------eCCCCCcceEEEccCCCcEEEcccCCCC
Confidence 34567999998 367777 88889999999873 32221 11 123467999999985 6999999753
Q ss_pred cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEEEcCC
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSS 211 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyvtd~~ 211 (337)
.|.++++++...+.++. ..+..||+|++|++ ++|||+|..
T Consensus 520 ~I~~~~~dG~~~~~l~~---------------------------------------~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVT---------------------------------------ENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp CEEBCCSSSCCCCEESC---------------------------------------SSCSSCCCEEECTTTCCEEEEETT
T ss_pred eEEEEeCCCCCeeEEEe---------------------------------------CCCCCccEEEEeccCCEEEEEecC
Confidence 48888877544433332 14678999999975 679999976
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEec---cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA---NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI 288 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~---~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~ 288 (337)
.. +|++++.++...+.+.. .+..|.||+++.+ .|||+++..++|.+++...++ ..+++.
T Consensus 561 ~~--------------~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~--~~~~i~ 622 (699)
T 1n7d_A 561 LH--------------SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGS--DVNLLA 622 (699)
T ss_dssp TT--------------EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEE--EEECCC
T ss_pred CC--------------eEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCC--ceEEee
Confidence 43 88999987665555553 3678999999654 799999999999999863211 122222
Q ss_pred cCCCCCCCceeECCCC
Q psy4771 289 DGLPGLPDNVKRDSKG 304 (337)
Q Consensus 289 ~~~~g~Pdgi~~d~dG 304 (337)
.++. .|.+|++..+.
T Consensus 623 ~~~~-~P~~i~v~~~~ 637 (699)
T 1n7d_A 623 ENLL-SPEDMVLFHQL 637 (699)
T ss_dssp TTCS-SCCCCCBCSSS
T ss_pred cCCC-CCcEEEEeCcc
Confidence 2222 37888776443
No 67
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.48 E-value=7.4e-12 Score=113.50 Aligned_cols=217 Identities=11% Similarity=0.116 Sum_probs=141.9
Q ss_pred cCccEEEe-eCC-eEE-EEecCcEEEEEeCCceeE-EEecCccccCccccCccCCcce-EEECCCCc-EEEEECCC----
Q psy4771 63 HGPEAVVK-HKG-DLY-MGVDGGHILKLSGGKLVP-VVKLGKDCYGFKYEQQCGRPLG-IKFDKNGA-LHVADAYF---- 132 (337)
Q Consensus 63 ~~P~~i~~-~~g-~ly-~d~~~g~I~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~P~G-l~~d~~G~-lyVad~~~---- 132 (337)
..| ++++ .++ .+| ++..+++|+.++...... ...+ .....|.. ++++++|+ || +....
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~ 108 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI----------QEGQSSMADVDITPDDQFAV-TVTGLNHPF 108 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE----------EECSSCCCCEEECTTSSEEE-ECCCSSSSC
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec----------ccCCCCccceEECCCCCEEE-EecCCCCcc
Confidence 345 8888 444 588 666688999998732211 1111 12245777 99999995 56 43333
Q ss_pred cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----cccc-eeeeccccCC----------CCCCCCcc
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQ-LISMDTEIDG----------AKPQIPNS 196 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~-v~~~~~~~~~----------~~~~~pn~ 196 (337)
.|..+|.++++...... .+. .|+.++++++|+.+ ..+. +...+..-.+ .....|.+
T Consensus 109 ~i~v~d~~~~~~~~~~~-----~~~---~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIP-----IPY---DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp EEEEEETTTTEEEEEEE-----CCT---TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred cEEEEECCCCCeEEEEE-----CCC---CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence 59999998887655543 122 37899999999865 2244 4433211000 12356899
Q ss_pred EEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccCCCEEEEEeCCCCEEE
Q psy4771 197 VTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSADESFVIVAETMSSRVH 272 (337)
Q Consensus 197 v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~ 272 (337)
++++++|+ +|+++.. .+.|..+|.++++. .........|.+++++|||++||++....+.|.
T Consensus 181 ~~~spdg~~l~v~~~~--------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLI--------------GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp EEECTTSSEEEEEETT--------------TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEE
T ss_pred eEECCCCCEEEEEeCC--------------CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEE
Confidence 99999997 8988765 34788888887765 333444578899999999999999998888999
Q ss_pred EEEeeCCCCCceeeeecCC---CC---CCCceeECCCCC-EEEEecCC
Q psy4771 273 RYYLKGPKQGKSEVFIDGL---PG---LPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~---~g---~Pdgi~~d~dG~-l~va~~~~ 313 (337)
+++++..+......+.... +. ...++++++||+ +|++....
T Consensus 247 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 247 NFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp EEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred EEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 9997643322222222211 11 124589999997 78887544
No 68
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.47 E-value=5.3e-12 Score=117.18 Aligned_cols=248 Identities=9% Similarity=0.124 Sum_probs=147.4
Q ss_pred CceeccCcccCccEEEe-eCCe-EEEEecCcEEEEEeCC-ceeE-EEecCccccCccccCccCCcceEEECC----CCcE
Q psy4771 54 AEKLFENEIHGPEAVVK-HKGD-LYMGVDGGHILKLSGG-KLVP-VVKLGKDCYGFKYEQQCGRPLGIKFDK----NGAL 125 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~~g~-ly~d~~~g~I~~~~~~-~~~~-~~~~g~~~~~~~~~~~~~~P~Gl~~d~----~G~l 125 (337)
++.+++ .+..|.+|++ .+|. +|+....|+|++++.+ +... +..+... .....+.|+||++++ +|.|
T Consensus 10 ~~~va~-~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v-----~~~g~~g~~gia~~pdf~~~g~l 83 (353)
T 2g8s_A 10 VEVLQD-KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDV-----WAHGQGGLLDVVLAPDFAQSRRI 83 (353)
T ss_dssp EEEEEE-EESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCC-----CCSTTCSEEEEEECTTHHHHCEE
T ss_pred EEEEEC-CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCccc-----ccCCCCCceeEEECCCCCCCCEE
Confidence 344444 3678999999 7888 9976678999999863 3221 1111100 012235689999999 4899
Q ss_pred EEEECC--------CcEEEEEcCCC--e---EEEEeccccccCCCCCCCCCceeeCCCCCcc-c----------------
Q psy4771 126 HVADAY--------FGLYKVNVTTG--Q---TEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-Q---------------- 175 (337)
Q Consensus 126 yVad~~--------~gv~~vd~~~g--~---~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-~---------------- 175 (337)
||++.. ..|.+++.+.+ . .+.+.... .........|..+++++||+++ .
T Consensus 84 Yv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~-p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~ 162 (353)
T 2g8s_A 84 WLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQM-PKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKL 162 (353)
T ss_dssp EEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECS-SCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSC
T ss_pred EEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEEC-CCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCC
Confidence 999753 24888876533 2 23333210 0000111357889999999888 1
Q ss_pred ccceeeeccccC-------------C-----CCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeeecCCccEEE-----
Q psy4771 176 TEQLISMDTEID-------------G-----AKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQ----- 231 (337)
Q Consensus 176 ~~~v~~~~~~~~-------------~-----~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~----- 231 (337)
.+.|..++.+.. . ..+..|.++++|+ +|+||++|...+..+-+..+ ..|.-|-
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i---~~G~nyGwp~~~ 239 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIP---QKGKNYGWPLAT 239 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECC---CTTCBCCTTTBC
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEe---ccCCcCCCCCcc
Confidence 135777764321 0 1346699999999 79999999874311101000 0010000
Q ss_pred ----EcC----------CCCee--EEEeccccceeeEEEccCC------CEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 232 ----YNP----------KTKKN--KVLIANLHFANGVELSADE------SFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 232 ----~d~----------~~~~~--~~~~~~~~~p~gia~~~dg------~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
|+. ..+.. .........|.|+++.... ..+||++...++|+++++++.+....+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 319 (353)
T 2g8s_A 240 WGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT 319 (353)
T ss_dssp SSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG
T ss_pred CCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc
Confidence 000 00000 0111223468999997421 3799999999999999998643222334443
Q ss_pred CCCCCCCceeECCCCCEEEEec
Q psy4771 290 GLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 290 ~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
...+.|.+|++++||.|||+..
T Consensus 320 ~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 320 DRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp GGCCCEEEEEECTTSCEEEEEC
T ss_pred CCCCceeEEEECCCCcEEEEEe
Confidence 3445799999999999999853
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.47 E-value=2.7e-12 Score=116.83 Aligned_cols=184 Identities=14% Similarity=0.170 Sum_probs=124.7
Q ss_pred cCccEEEe-eCCeEE-EEecC----cEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC---
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDG----GHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY--- 131 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~----g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~--- 131 (337)
..|.++++ .+|.+| ++..+ +.|++++..+ ...+. .. ......|+++++|++|++|+++..
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~--~~-------~~~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII--ED-------LSTAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE--CS-------SSSCCCEEEEEECTTSCEEEEECCCBT
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE--cc-------CccCCcccceEECCCCCEEEEeccccc
Confidence 36888888 678888 55555 5899998732 22221 10 012356899999999999999864
Q ss_pred ----CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EE
Q psy4771 132 ----FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VY 206 (337)
Q Consensus 132 ----~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-ly 206 (337)
.+|++++++++++..+.. ....+++++++++|+ +|
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~----------------------------------------~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQ----------------------------------------NISVANGIALSTDEKVLW 197 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEE----------------------------------------EESSEEEEEECTTSSEEE
T ss_pred cCCCceEEEEeCCCCEEEEeec----------------------------------------CCCcccceEECCCCCEEE
Confidence 359999988777665542 123489999999996 99
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCC-C-eeEE-----E--eccccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKT-K-KNKV-----L--IANLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~-~-~~~~-----~--~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+++.. .+.|+++|.++ + .... . ..+...|++++++++|+ +|+++...++|.+|+.+
T Consensus 198 v~~~~--------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 198 VTETT--------------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEGG--------------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred EEeCC--------------CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCC
Confidence 98754 23677777642 2 2211 1 11224799999999995 99999888899999875
Q ss_pred CCCCCceeeeecCCC--C---CCCceeECCCC-CEEEEecCC
Q psy4771 278 GPKQGKSEVFIDGLP--G---LPDNVKRDSKG-NFLVSLVCP 313 (337)
Q Consensus 278 g~~~~~~~~~~~~~~--g---~Pdgi~~d~dG-~l~va~~~~ 313 (337)
+. ....+..... | .|.++++++|| .||++....
T Consensus 263 g~---~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 263 GY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CC---EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 42 1222221111 1 58999999997 699988654
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.46 E-value=4.6e-12 Score=112.48 Aligned_cols=155 Identities=15% Similarity=0.104 Sum_probs=114.2
Q ss_pred cCccEEEeeCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCcc-CCcceEEECCCC-cEEEEECCCcEEEEEc
Q psy4771 63 HGPEAVVKHKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQC-GRPLGIKFDKNG-ALHVADAYFGLYKVNV 139 (337)
Q Consensus 63 ~~P~~i~~~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~P~Gl~~d~~G-~lyVad~~~gv~~vd~ 139 (337)
..+++++..++.|| ++..++++.++|..+.+.+..+. .. ..+.|++. +| +||+++..+.|..+|+
T Consensus 66 ~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~----------~g~~~g~glt~--Dg~~l~vs~gs~~l~viD~ 133 (266)
T 2iwa_A 66 YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFT----------HQMKDGWGLAT--DGKILYGSDGTSILYEIDP 133 (266)
T ss_dssp CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEE----------CCSSSCCEEEE--CSSSEEEECSSSEEEEECT
T ss_pred cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEE----------CCCCCeEEEEE--CCCEEEEECCCCeEEEEEC
Confidence 35678888888999 88889999999986554444331 11 23445555 44 9999985455999999
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCcee
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLF 219 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~ 219 (337)
++.++..-+... ..+ .+...||.+.+. +|.+|++....
T Consensus 134 ~t~~v~~~I~Vg--~~~--------------------------------~p~~~~nele~~-dg~lyvn~~~~------- 171 (266)
T 2iwa_A 134 HTFKLIKKHNVK--YNG--------------------------------HRVIRLNELEYI-NGEVWANIWQT------- 171 (266)
T ss_dssp TTCCEEEEEECE--ETT--------------------------------EECCCEEEEEEE-TTEEEEEETTS-------
T ss_pred CCCcEEEEEEEC--CCC--------------------------------cccccceeEEEE-CCEEEEecCCC-------
Confidence 987765444311 111 145678999988 78999988753
Q ss_pred eeeecCCccEEEEcCCCCeeEEEec--cc------------cceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 220 EGLTSGSGRLIQYNPKTKKNKVLIA--NL------------HFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 220 ~~~~~~~G~v~~~d~~~~~~~~~~~--~~------------~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+.|.++|++++++....+ ++ ..|||||++++++++||+....++|+++++..
T Consensus 172 -------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 172 -------DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp -------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred -------CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 389999999998754442 22 47899999999999999999999999999864
No 71
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.43 E-value=2.8e-12 Score=118.95 Aligned_cols=157 Identities=13% Similarity=0.233 Sum_probs=108.4
Q ss_pred cCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 111 CGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 111 ~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
+..|.+|+++++|+|||++....|++++ +++...+.... ... ..
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~--v~~--------------------------------~g 73 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELS--VYH--------------------------------RG 73 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECC--CCC--------------------------------ST
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecce--Eee--------------------------------cC
Confidence 4679999999999999999765699998 45555554311 000 13
Q ss_pred CCCCccEEEcCC----CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCe---eEEEec-------cccceeeEEEcc
Q psy4771 191 PQIPNSVTVDSD----GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK---NKVLIA-------NLHFANGVELSA 256 (337)
Q Consensus 191 ~~~pn~v~vd~~----G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~---~~~~~~-------~~~~p~gia~~~ 256 (337)
...|++|+++++ |.||+++.... + ....+|++++.+++. .+.+.. ....+++|++++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~--~-------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p 144 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAE--G-------GLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP 144 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECT--T-------SSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCC--C-------CCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC
Confidence 467999999997 78999986421 0 012478888766442 223322 245789999999
Q ss_pred CCCEEEEEeCC-------------CCEEEEEEeeCCCC----------CceeeeecCCCCCCCceeECC-CCCEEEEecC
Q psy4771 257 DESFVIVAETM-------------SSRVHRYYLKGPKQ----------GKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVC 312 (337)
Q Consensus 257 dg~~lyva~~~-------------~~~I~~~~~~g~~~----------~~~~~~~~~~~g~Pdgi~~d~-dG~l~va~~~ 312 (337)
|| .|||+... .++|+|++.+|.-. ...++++.++.. |.||++|+ +|+||++...
T Consensus 145 dG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 145 DG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRN-PQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSE-ECCCEECTTTCCEEEEEEC
T ss_pred CC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCC-cccEEEECCCCCEEEEEcC
Confidence 99 69999742 36899999876210 234566655433 99999999 7899999976
Q ss_pred CC
Q psy4771 313 PV 314 (337)
Q Consensus 313 ~~ 314 (337)
..
T Consensus 223 ~~ 224 (352)
T 2ism_A 223 PS 224 (352)
T ss_dssp C-
T ss_pred CC
Confidence 63
No 72
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.39 E-value=6.2e-12 Score=116.77 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=108.2
Q ss_pred ccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 110 QCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 110 ~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
.+..|.+|+++++|+|||++....|++++.+ |+ +.+.... ... .
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~-G~-~~~~~~~--v~~--------------------------------~ 70 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERPGRLVLISPS-GK-KLVASFD--VAN--------------------------------V 70 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETTTEEEEECSS-CE-EEEEECC--CCC--------------------------------S
T ss_pred CCCCCeEEEEcCCCeEEEEeCCCEEEEEeCC-Cc-eEeeccc--eee--------------------------------c
Confidence 3567999999999999999976569999854 55 4444310 000 0
Q ss_pred CCCCCccEEEcCC----CcEEEEcCC-CCccCceeeeeecCCccEEEEcCCCC-----eeEEEec-----cccceeeEEE
Q psy4771 190 KPQIPNSVTVDSD----GMVYWSDSS-TKYKSGLFEGLTSGSGRLIQYNPKTK-----KNKVLIA-----NLHFANGVEL 254 (337)
Q Consensus 190 ~~~~pn~v~vd~~----G~lyvtd~~-~~~~~~~~~~~~~~~G~v~~~d~~~~-----~~~~~~~-----~~~~p~gia~ 254 (337)
....|++|+++++ |.||+++.. .. + .....+|++++.+++ +.+++.. ....+++|++
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~--~------~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~ 142 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAE--G------GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRF 142 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECG--G------GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEE
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCC--C------CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEE
Confidence 2456899999996 889999863 10 0 001147888876644 1223322 2457899999
Q ss_pred ccCCCEEEEEeCC-------------CCEEEEEEeeCCCC-----CceeeeecCCCCCCCceeECC-CCCEEEEecCC
Q psy4771 255 SADESFVIVAETM-------------SSRVHRYYLKGPKQ-----GKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCP 313 (337)
Q Consensus 255 ~~dg~~lyva~~~-------------~~~I~~~~~~g~~~-----~~~~~~~~~~~g~Pdgi~~d~-dG~l~va~~~~ 313 (337)
++|| .|||+... .++|+|++.+|.-. ...++++.++.. |.||++|+ +|+||++....
T Consensus 143 ~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 143 GPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp CTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCS
T ss_pred CCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCC
Confidence 9999 49999642 36899999876411 124677665544 99999999 79999999765
No 73
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.39 E-value=5.1e-11 Score=104.85 Aligned_cols=153 Identities=16% Similarity=0.194 Sum_probs=113.7
Q ss_pred ccEEEeeCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCe
Q psy4771 65 PEAVVKHKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 65 P~~i~~~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~ 143 (337)
.++++..++.|| ++..+++++++|..+.+.+.++. ..+.+.|++.|. ++||++|....|..+|+++.+
T Consensus 89 geGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~----------~~~eG~glt~dg-~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 89 GEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN----------YDGEGWGLTHND-QYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp EEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE----------CSSCCCCEEECS-SCEEECCSSSEEEEECTTTCS
T ss_pred eeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE----------CCCCceEEecCC-CEEEEECCCCeEEEEcCCCCe
Confidence 377888889999 88889999999986655554442 123457888753 499999865569999999877
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
+..-+.. ...| .++..+|.+... +|.||+..+..+
T Consensus 158 v~~~I~V--~~~g--------------------------------~~~~~lNELe~~-~G~lyan~w~~~---------- 192 (262)
T 3nol_A 158 PVRTITV--TAHG--------------------------------EELPELNELEWV-DGEIFANVWQTN---------- 192 (262)
T ss_dssp EEEEEEC--EETT--------------------------------EECCCEEEEEEE-TTEEEEEETTSS----------
T ss_pred EEEEEEe--ccCC--------------------------------ccccccceeEEE-CCEEEEEEccCC----------
Confidence 6554431 1122 246678888876 789999887643
Q ss_pred cCCccEEEEcCCCCeeEEEecc-------------ccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 224 SGSGRLIQYNPKTKKNKVLIAN-------------LHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~~~-------------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
.|.++|+++|++....+- ...|||||++|++++|||+...=.+++++.+.
T Consensus 193 ----~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 193 ----KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp ----EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ----eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 899999999987654432 24789999999999999999776788888764
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.37 E-value=2.2e-10 Score=105.38 Aligned_cols=224 Identities=15% Similarity=0.171 Sum_probs=134.3
Q ss_pred ccCccEEEe-eC-CeEEEEec----CcEEE--EEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC
Q psy4771 62 IHGPEAVVK-HK-GDLYMGVD----GGHIL--KLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY 131 (337)
Q Consensus 62 ~~~P~~i~~-~~-g~ly~d~~----~g~I~--~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~ 131 (337)
...|.++++ .+ ..||+... +++|. .++. ++.+.+.... .....|.++++ ....||+++..
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~---------~~~~~p~~~~~-dg~~l~~~~~~ 118 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK---------TMGADPCYLTT-NGKNIVTANYS 118 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE---------CSSSCEEEEEE-CSSEEEEEETT
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec---------cCCCCcEEEEE-CCCEEEEEECC
Confidence 457888998 44 46885444 36664 4555 4444443221 12356889999 33378998855
Q ss_pred Cc-EEEEEcC-CCeEEEEeccccccCCC-------CCCCCCceeeCCCCCcc-----cccceeeeccccC----------
Q psy4771 132 FG-LYKVNVT-TGQTEQLISMDTEIDGA-------KPQIPNSVTVDSDGQTG-----QTEQLISMDTEID---------- 187 (337)
Q Consensus 132 ~g-v~~vd~~-~g~~~~l~~~~~~~~g~-------~~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~~---------- 187 (337)
.+ +..++.+ ++.+..+.... ...|. ....|+.++++++|+.+ ..+.|..+.....
T Consensus 119 ~~~v~~~~~~~~g~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 119 GGSITVFPIGQDGALLPASDVI-EFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp TTEEEEEEBCTTSCBCSCSEEE-ECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred CCEEEEEEeCCCCcCcccceeE-EccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence 44 6666654 23322211100 01111 01234679999999955 2344444431111
Q ss_pred ---------CCCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe------ccccceee
Q psy4771 188 ---------GAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI------ANLHFANG 251 (337)
Q Consensus 188 ---------~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~------~~~~~p~g 251 (337)
......|+++++++||+ +|+++... +.|..++.++++.+.+. .+...|.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~--------------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~ 263 (361)
T 3scy_A 198 TKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG--------------GTVIAFRYADGMLDEIQTVAADTVNAQGSGD 263 (361)
T ss_dssp EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT--------------CEEEEEEEETTEEEEEEEEESCSSCCCCEEE
T ss_pred ecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC--------------CeEEEEEecCCceEEeEEEecCCCCCCCccc
Confidence 11245688999999997 88887542 35666665566553332 12345789
Q ss_pred EEEccCCCEEEEEeCC-CCEEEEEEeeC--CCCCceeeeecCCCCCCCceeECCCCC-EEEEecC
Q psy4771 252 VELSADESFVIVAETM-SSRVHRYYLKG--PKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 252 ia~~~dg~~lyva~~~-~~~I~~~~~~g--~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
++++|||++||+++.. .++|..|+++. +.......+. . ...|.++++++||+ +|++...
T Consensus 264 i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 264 IHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECC
Confidence 9999999999999998 88999999862 2111111111 1 34689999999998 8888744
No 75
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=4.3e-11 Score=109.50 Aligned_cols=180 Identities=21% Similarity=0.263 Sum_probs=120.8
Q ss_pred CccEEEe-eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-------Cc
Q psy4771 64 GPEAVVK-HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-------FG 133 (337)
Q Consensus 64 ~P~~i~~-~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-------~g 133 (337)
.|.++++ .+|.+|+...+ .|++++. ++...+..... .....+++++++|++|++|+++.. .+
T Consensus 91 ~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~-------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~ 162 (326)
T 2ghs_A 91 MGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELES-------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGS 162 (326)
T ss_dssp CEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSST-------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEE
T ss_pred cceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCC-------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceE
Confidence 4667777 68888865554 4999986 34433321110 012346899999999999999742 35
Q ss_pred EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCC
Q psy4771 134 LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSST 212 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~ 212 (337)
|++++ ++++..+.. ....++++++++||+ +|+++...
T Consensus 163 l~~~~--~g~~~~~~~----------------------------------------~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 163 IYHVA--KGKVTKLFA----------------------------------------DISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEEEE--TTEEEEEEE----------------------------------------EESSEEEEEECTTSCEEEEEETTT
T ss_pred EEEEe--CCcEEEeeC----------------------------------------CCcccCCeEEcCCCCEEEEEECCC
Confidence 99998 466655432 123589999999996 99988652
Q ss_pred CccCceeeeeecCCccEEEEcCC--CC-ee---EEEe---ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPK--TK-KN---KVLI---ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK 283 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~--~~-~~---~~~~---~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~ 283 (337)
+.|+++|.+ +| +. +.+. .....|++++++++| .|||+....++|.+|+.++..
T Consensus 201 --------------~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~~--- 262 (326)
T 2ghs_A 201 --------------NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGNH--- 262 (326)
T ss_dssp --------------CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCCE---
T ss_pred --------------CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCCCE---
Confidence 378888764 55 32 1222 123578999999999 499999888899999874321
Q ss_pred eeeeecCCCC-CCCceeEC-CCC-CEEEEecCC
Q psy4771 284 SEVFIDGLPG-LPDNVKRD-SKG-NFLVSLVCP 313 (337)
Q Consensus 284 ~~~~~~~~~g-~Pdgi~~d-~dG-~l~va~~~~ 313 (337)
...+. ++. .|.+++++ +++ .+||+....
T Consensus 263 ~~~i~--~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 263 IARYE--VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEE--CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEE--CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 12222 222 47889997 776 499998765
No 76
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.36 E-value=2.1e-10 Score=101.13 Aligned_cols=197 Identities=12% Similarity=0.161 Sum_probs=124.2
Q ss_pred cCcccCccEEEe--eCCeEE-EEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-c
Q psy4771 59 ENEIHGPEAVVK--HKGDLY-MGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-G 133 (337)
Q Consensus 59 ~g~~~~P~~i~~--~~g~ly-~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-g 133 (337)
.|....+.++++ +++.|| +...+++|++++. ++......+ ..+..+.||+++++|.+||++... +
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l----------~g~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL----------DFVKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC----------SSCSSEEEEEECSTTEEEEEETTTTE
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec----------CCCCChHHeEEeCCCEEEEEECCCCc
Confidence 344456788888 367899 6888999999998 443322222 223679999999999999997554 5
Q ss_pred EEEEEcCC-CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC-cEEEEcCC
Q psy4771 134 LYKVNVTT-GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSS 211 (337)
Q Consensus 134 v~~vd~~~-g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G-~lyvtd~~ 211 (337)
++.++... +.+..+....... +. ...=....+|++|+++ ++|++...
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~-~~------------------------------~~~N~g~EGLA~d~~~~~L~va~E~ 141 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPL-QE------------------------------SPTNCGFEGLAYSRQDHTFWFFKEK 141 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCC-SS------------------------------CCCSSCCEEEEEETTTTEEEEEEES
T ss_pred EEEEEcCCCCeeeeeeeecccc-cc------------------------------ccccCCcceEEEeCCCCEEEEEECc
Confidence 66665432 3222222110000 00 0011235899999977 69987654
Q ss_pred CCccCceeeeeecCCccEEEEc--CCCCeeEEEec-------cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYN--PKTKKNKVLIA-------NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG 282 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d--~~~~~~~~~~~-------~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~ 282 (337)
.. ..||.++ +.+.....+.+ .+.-+.+++++|..+++|+....++.|..++.+|.. .
T Consensus 142 ~p-------------~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~-~ 207 (255)
T 3qqz_A 142 NP-------------IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEV-I 207 (255)
T ss_dssp SS-------------EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-E
T ss_pred CC-------------ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCE-E
Confidence 21 2677776 22223333321 234679999999988999999999999999987641 1
Q ss_pred ceeeeecCC------CCCCCceeECCCCCEEEEe
Q psy4771 283 KSEVFIDGL------PGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 283 ~~~~~~~~~------~g~Pdgi~~d~dG~l~va~ 310 (337)
....+..+. ...|.||++|++|++||++
T Consensus 208 ~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 208 GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred EEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 111111111 1258999999999999996
No 77
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.36 E-value=8.9e-11 Score=102.41 Aligned_cols=153 Identities=16% Similarity=0.143 Sum_probs=114.3
Q ss_pred ccEEEeeCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCe
Q psy4771 65 PEAVVKHKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 65 P~~i~~~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~ 143 (337)
.++++..++.|| ++..+++++++|..+.+.+.++. ..+.+.|++.|. ++||++|....|..+|+++.+
T Consensus 67 geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~----------~~~~Gwglt~dg-~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 67 GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFR----------YPGEGWALTSDD-SHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE----------CSSCCCEEEECS-SCEEEECSSSEEEEECTTTCC
T ss_pred eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEe----------CCCCceEEeeCC-CEEEEECCCCeEEEEeCCCCe
Confidence 478888889999 88899999999986665554442 123567888653 499999965569999999877
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
+..-+... ..|. ++..+|.+... +|+||+..+..+
T Consensus 136 ~~~~I~V~--~~g~--------------------------------~~~~lNeLe~~-~G~lyanvw~s~---------- 170 (243)
T 3mbr_X 136 QVGSIKVT--AGGR--------------------------------PLDNLNELEWV-NGELLANVWLTS---------- 170 (243)
T ss_dssp EEEEEECE--ETTE--------------------------------ECCCEEEEEEE-TTEEEEEETTTT----------
T ss_pred EEEEEEEc--cCCc--------------------------------ccccceeeEEe-CCEEEEEECCCC----------
Confidence 65544321 1221 45667888876 789998887644
Q ss_pred cCCccEEEEcCCCCeeEEEec--------------cccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 224 SGSGRLIQYNPKTKKNKVLIA--------------NLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~~--------------~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
.|.++|+++|++....+ ....+||||+++++++|||+...=.+++.+.+.
T Consensus 171 ----~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 171 ----RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp ----EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred ----eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 89999999998755432 124789999999999999999776788888764
No 78
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.36 E-value=4.9e-11 Score=105.01 Aligned_cols=152 Identities=15% Similarity=0.185 Sum_probs=112.7
Q ss_pred ccEEEeeCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCe
Q psy4771 65 PEAVVKHKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 65 P~~i~~~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~ 143 (337)
.|+++..++.|| ++..+++++++|..+.+.+.++. ..+.+.|++.|. ++||++|....|..+|+++.+
T Consensus 98 geGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~----------~~~eGwGLt~Dg-~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 98 AEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR----------YSGEGWGLCYWN-GKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE----------CSSCCCCEEEET-TEEEEECSSSEEEEECTTTCC
T ss_pred eeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe----------CCCceeEEecCC-CEEEEECCCCEEEEEcCCCCe
Confidence 377888888999 88889999999986665554442 123467888763 499999965569999999887
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
+..-+.. ...| .++..+|.+... +|.||+..+..+
T Consensus 167 v~~~I~V--~~~g--------------------------------~~v~~lNeLe~~-dG~lyanvw~s~---------- 201 (268)
T 3nok_A 167 LVGAVQV--KLRG--------------------------------QPVELINELECA-NGVIYANIWHSS---------- 201 (268)
T ss_dssp EEEEEEC--EETT--------------------------------EECCCEEEEEEE-TTEEEEEETTCS----------
T ss_pred EEEEEEe--CCCC--------------------------------cccccccccEEe-CCEEEEEECCCC----------
Confidence 6654432 1122 146678888887 789999887643
Q ss_pred cCCccEEEEcCCCCeeEEEecc--------------ccceeeEEEccCCCEEEEEeCCCCEEEEEEe
Q psy4771 224 SGSGRLIQYNPKTKKNKVLIAN--------------LHFANGVELSADESFVIVAETMSSRVHRYYL 276 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~~~--------------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~ 276 (337)
.|.++|+++|++....+- ...+||||+++++++|||+...=.+++.+.+
T Consensus 202 ----~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 202 ----DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp ----EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred ----eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 899999999987554321 1378999999999999999876677777765
No 79
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.36 E-value=3.2e-10 Score=102.89 Aligned_cols=226 Identities=14% Similarity=0.065 Sum_probs=129.9
Q ss_pred eCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCC-cEEEEEcCCCeEEEE
Q psy4771 71 HKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYF-GLYKVNVTTGQTEQL 147 (337)
Q Consensus 71 ~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~-gv~~vd~~~g~~~~l 147 (337)
.++.+| ++..+++|..|+..+.+....+.. +....|.+++++++|+ +|++.... .|+.+|.++++....
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--------PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEEC--------SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEec--------CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 466777 788899999999743322222210 1112589999999994 88887654 499999988876544
Q ss_pred eccccccCCCCCCCCCceeeCCCCCcc---c-------------ccceeeecccc---CC-----CCCCCCccEEEcCCC
Q psy4771 148 ISMDTEIDGAKPQIPNSVTVDSDGQTG---Q-------------TEQLISMDTEI---DG-----AKPQIPNSVTVDSDG 203 (337)
Q Consensus 148 ~~~~~~~~g~~~~~P~~v~~~~~g~~~---~-------------~~~v~~~~~~~---~~-----~~~~~pn~v~vd~~G 203 (337)
.... ...+.....|..+++++||+.+ . .+.|..++..- .. .....+.+++++++|
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 81 ANLS-SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EESC-CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEcc-cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 4310 0000000137889999999887 2 25555554221 11 012357788899999
Q ss_pred cEEEEcCCCC-c--cCc-e-eeeeecC---------------------------------------------CccEEEEc
Q psy4771 204 MVYWSDSSTK-Y--KSG-L-FEGLTSG---------------------------------------------SGRLIQYN 233 (337)
Q Consensus 204 ~lyvtd~~~~-~--~~~-~-~~~~~~~---------------------------------------------~G~v~~~d 233 (337)
++|+++..-. + ..+ . ..+.... ...++.+|
T Consensus 160 ~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 160 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp CEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred cEEEccCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 9887643200 0 000 0 0000000 00112244
Q ss_pred CCCCeeEEEe--ccccceeeEEEcc-CCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEE
Q psy4771 234 PKTKKNKVLI--ANLHFANGVELSA-DESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVS 309 (337)
Q Consensus 234 ~~~~~~~~~~--~~~~~p~gia~~~-dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va 309 (337)
..++++..+. .....+.++++++ ||+.+|++ .++|.+++++.. +...... .+..|.+++++++|+ +|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQR---KLIKAAN-LDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTT---EEEEEEE-CSSCCCEEEECSSSSCEEEE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccC---eEEEEEc-CCCCccceEECCCCCEEEEe
Confidence 4444432221 1123678899999 99999999 679999997543 2211122 234588999999985 8886
Q ss_pred ecC
Q psy4771 310 LVC 312 (337)
Q Consensus 310 ~~~ 312 (337)
...
T Consensus 313 ~~~ 315 (349)
T 1jmx_B 313 GTF 315 (349)
T ss_dssp SBS
T ss_pred cCC
Confidence 433
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.35 E-value=2e-10 Score=101.92 Aligned_cols=183 Identities=13% Similarity=0.025 Sum_probs=119.9
Q ss_pred cCccEEEe-eCCeEEEEec---CcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEE
Q psy4771 63 HGPEAVVK-HKGDLYMGVD---GGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKV 137 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly~d~~---~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~v 137 (337)
..|+++++ .++.||++.. +++|.++|..+.+.+..+. .+....+.|++++. ++||+++...+ ++.+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--------l~~~~fgeGi~~~g-~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK--------MDDSYFGEGLTLLN-EKLYQVVWLKNIGFIY 91 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE--------CCTTCCEEEEEEET-TEEEEEETTCSEEEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe--------cCCCcceEEEEEeC-CEEEEEEecCCEEEEE
Confidence 35789999 4589995543 5789999984333332221 01223466888873 49999997655 9999
Q ss_pred EcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC-cEEEEcCCCCccC
Q psy4771 138 NVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSSTKYKS 216 (337)
Q Consensus 138 d~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G-~lyvtd~~~~~~~ 216 (337)
|+++.++..-+.. + .+.+..+.+|| ++|+++. +
T Consensus 92 D~~t~~v~~~i~~---------------------------------------g--~~~g~glt~Dg~~l~vs~g-s---- 125 (266)
T 2iwa_A 92 DRRTLSNIKNFTH---------------------------------------Q--MKDGWGLATDGKILYGSDG-T---- 125 (266)
T ss_dssp ETTTTEEEEEEEC---------------------------------------C--SSSCCEEEECSSSEEEECS-S----
T ss_pred ECCCCcEEEEEEC---------------------------------------C--CCCeEEEEECCCEEEEECC-C----
Confidence 9988765543321 1 23344455555 5999883 2
Q ss_pred ceeeeeecCCccEEEEcCCCCeeEEEec------cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecC
Q psy4771 217 GLFEGLTSGSGRLIQYNPKTKKNKVLIA------NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDG 290 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~~~~~~~~~------~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~ 290 (337)
+.|+.+|+++.+...-.. .+..||++.+. || .||++....+.|.++++...+... .+-..+
T Consensus 126 ----------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~-~I~~~g 192 (266)
T 2iwa_A 126 ----------SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLG-WILLPN 192 (266)
T ss_dssp ----------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEE-EEECHH
T ss_pred ----------CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEE-EEECCC
Confidence 489999999876433221 23468999988 66 799999999999999986543211 111111
Q ss_pred C---------C--CCCCceeECCCCC-EEEEecCC
Q psy4771 291 L---------P--GLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 291 ~---------~--g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
+ + ..|.||+++++|+ +||+.-..
T Consensus 193 ~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 193 LRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp HHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred cccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 1 1 2578999999985 99998433
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.34 E-value=3.1e-10 Score=104.43 Aligned_cols=181 Identities=14% Similarity=0.152 Sum_probs=114.9
Q ss_pred CCcceEEECCCC-cEEEEECC----Cc--EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----cccce
Q psy4771 112 GRPLGIKFDKNG-ALHVADAY----FG--LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQL 179 (337)
Q Consensus 112 ~~P~Gl~~d~~G-~lyVad~~----~g--v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~v 179 (337)
..|.+++++++| .||+++.. .. ++.++.++|+.+.+... ...+. .|+.+++ +|+.+ ..+.+
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~--~~~~~---~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ--KTMGA---DPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE--ECSSS---CEEEEEE--CSSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe--ccCCC---CcEEEEE--CCCEEEEEECCCCEE
Confidence 569999999999 48888763 23 46778777877666542 11222 4788888 67755 22344
Q ss_pred eeeccccCCC--------------------CCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCC-
Q psy4771 180 ISMDTEIDGA--------------------KPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK- 237 (337)
Q Consensus 180 ~~~~~~~~~~--------------------~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~- 237 (337)
..++....+. ....+++++++++|+ +|+++...+ .-.+|.++..++
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------------~v~v~~~~~~~~~ 190 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD------------QIHKFNINPNANA 190 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT------------EEEEEEECTTCCT
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC------------EEEEEEEcCCCCc
Confidence 4443221110 012347799999997 999886532 014455565544
Q ss_pred ---e-e-------EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC---CCCCceeECCC
Q psy4771 238 ---K-N-------KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP---GLPDNVKRDSK 303 (337)
Q Consensus 238 ---~-~-------~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~---g~Pdgi~~d~d 303 (337)
+ + .........|++++++|||++||+++...++|.+|+++++.......+.. .+ ..|.++++++|
T Consensus 191 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~-~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 191 DNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA-DTVNAQGSGDIHLSPD 269 (361)
T ss_dssp TTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES-CSSCCCCEEEEEECTT
T ss_pred ccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec-CCCCCCCcccEEECCC
Confidence 2 2 12233456789999999999999999888999999997432221121111 11 12569999999
Q ss_pred CC-EEEEecC
Q psy4771 304 GN-FLVSLVC 312 (337)
Q Consensus 304 G~-l~va~~~ 312 (337)
|+ +|++...
T Consensus 270 g~~l~v~~~~ 279 (361)
T 3scy_A 270 GKYLYASNRL 279 (361)
T ss_dssp SSEEEEEECS
T ss_pred CCEEEEECCC
Confidence 98 7787765
No 82
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.33 E-value=8e-10 Score=99.86 Aligned_cols=218 Identities=13% Similarity=0.183 Sum_probs=132.6
Q ss_pred CccEEEe-eC-CeEEEEec-CcEEEEEeC----CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCc-E
Q psy4771 64 GPEAVVK-HK-GDLYMGVD-GGHILKLSG----GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFG-L 134 (337)
Q Consensus 64 ~P~~i~~-~~-g~ly~d~~-~g~I~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~g-v 134 (337)
.|.++++ .+ ..+|+... +++|..|+. ++...+..+ ...+.|.+++++++|+ ||++....+ |
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~~~~~~~~~i 108 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES----------ALPGSLTHISTDHQGQFVFVGSYNAGNV 108 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE----------ECSSCCSEEEECTTSSEEEEEETTTTEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc----------ccCCCCcEEEEcCCCCEEEEEecCCCeE
Confidence 6788888 44 45885444 488877653 344333222 1123689999999995 888876444 7
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----cccceeeecccc------------CCCCCCCCccE
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQLISMDTEI------------DGAKPQIPNSV 197 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~------------~~~~~~~pn~v 197 (337)
..+|.+.+....... ...+. ..|..++++++|+.+ ..+.|..++... .......|+++
T Consensus 109 ~~~d~~~~~~~~~~~---~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 109 SVTRLEDGLPVGVVD---VVEGL--DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp EEEEEETTEEEEEEE---EECCC--TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred EEEECCCCccccccc---cccCC--CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 777763333222221 11111 137889999999865 223444433211 11123467889
Q ss_pred EEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcC--CCCeeEEE--ec----c---ccceeeEEEccCCCEEEEEe
Q psy4771 198 TVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNP--KTKKNKVL--IA----N---LHFANGVELSADESFVIVAE 265 (337)
Q Consensus 198 ~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~--~~~~~~~~--~~----~---~~~p~gia~~~dg~~lyva~ 265 (337)
+++++|+ +|+++... +.+..++. .+++.... .. + ...+.++++++||+.||++.
T Consensus 184 ~~~pdg~~l~~~~~~~--------------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELN--------------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EECTTSSEEEEEETTT--------------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred EECCCCCEEEEEeCCC--------------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 9999997 88887542 35555554 34443221 11 1 23566899999999999999
Q ss_pred CCCCEEEEEEeeC--CCCCceeeeecCCCCCCCceeECCCCC-EEEEecC
Q psy4771 266 TMSSRVHRYYLKG--PKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 266 ~~~~~I~~~~~~g--~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
...+.|.+|+++. ........+ . ..+.|.+++++++|+ +|++...
T Consensus 250 ~~~~~i~v~d~~~~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 250 RTASLITVFSVSEDGSVLSKEGFQ-P-TETQPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp TTTTEEEEEEECTTSCCEEEEEEE-E-CSSSCCCEEECTTSSEEEEECTT
T ss_pred cCCCEEEEEEEcCCCCceEEeeee-c-CCCccceEEECCCCCEEEEecCC
Confidence 8889999999973 211111111 1 223489999999998 7777743
No 83
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.31 E-value=5.4e-11 Score=109.61 Aligned_cols=158 Identities=16% Similarity=0.218 Sum_probs=109.4
Q ss_pred CccCCcceEEECCCCcEEEEECC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 109 QQCGRPLGIKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 109 ~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
..+..|.+|++.++|+|||++.. ..|++++.++++...+.... ...
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~-~v~-------------------------------- 75 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP-GVS-------------------------------- 75 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT-TCC--------------------------------
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC-cee--------------------------------
Confidence 34577999999999999999973 44999988777665543210 010
Q ss_pred CCCCCCCccEEEcCC----CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCC--------eeEEEec-----ccccee
Q psy4771 188 GAKPQIPNSVTVDSD----GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK--------KNKVLIA-----NLHFAN 250 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~----G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~--------~~~~~~~-----~~~~p~ 250 (337)
......+.+|+++++ |.||++.+... .++|.|+....+ +.+++.. ..++.+
T Consensus 76 ~~g~~GllGia~~Pdf~~~g~lYv~yt~~~------------~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~ 143 (347)
T 3das_A 76 PSGEGGLLGIALSPDYASDHMVYAYFTSAS------------DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGG 143 (347)
T ss_dssp CBTTBSEEEEEECTTHHHHCEEEEEEECSS------------SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCC
T ss_pred ecCCCCceeeEeccccccCCEEEEEEecCC------------CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCc
Confidence 013456899999984 88999764311 236777765431 2233332 245677
Q ss_pred eEEEccCCCEEEEEeC-------------CCCEEEEEEeeCCCC-----CceeeeecCCCCCCCceeECCCCCEEEEecC
Q psy4771 251 GVELSADESFVIVAET-------------MSSRVHRYYLKGPKQ-----GKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 251 gia~~~dg~~lyva~~-------------~~~~I~~~~~~g~~~-----~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
.|++++|| .|||+.. ..++|+|++.+|.-. ...++++.++.. |.||++|++|.||++...
T Consensus 144 ~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g 221 (347)
T 3das_A 144 RIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFG 221 (347)
T ss_dssp CEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECC
T ss_pred cccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecC
Confidence 89999999 5999952 357999999886411 124677765544 999999999999999976
Q ss_pred C
Q psy4771 313 P 313 (337)
Q Consensus 313 ~ 313 (337)
.
T Consensus 222 ~ 222 (347)
T 3das_A 222 Q 222 (347)
T ss_dssp S
T ss_pred C
Confidence 5
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.30 E-value=9.1e-10 Score=99.50 Aligned_cols=207 Identities=13% Similarity=0.132 Sum_probs=130.5
Q ss_pred CeEE-EEecCcEEEEEeC---CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECC-CcEEEEEcC--CCeE
Q psy4771 73 GDLY-MGVDGGHILKLSG---GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAY-FGLYKVNVT--TGQT 144 (337)
Q Consensus 73 g~ly-~d~~~g~I~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~-~gv~~vd~~--~g~~ 144 (337)
..+| ++..+++|..|+. ++...+..+ .....|.+++++++|+ ||++... ..|..++.+ +++.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~ 74 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV----------DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL 74 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE----------ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE----------ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce
Confidence 4677 5577888888864 333333222 2235689999999995 8888765 345554444 6766
Q ss_pred EEEeccccccCCCCCCCCCceeeCCCCCcc----c-ccceeeeccccCC---------CCCCCCccEEEcCCCc-EEEEc
Q psy4771 145 EQLISMDTEIDGAKPQIPNSVTVDSDGQTG----Q-TEQLISMDTEIDG---------AKPQIPNSVTVDSDGM-VYWSD 209 (337)
Q Consensus 145 ~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~-~~~v~~~~~~~~~---------~~~~~pn~v~vd~~G~-lyvtd 209 (337)
+.+... ...+ .|..++++++|+.+ . .+.|..++.. ++ .....+++++++++|+ +|+++
T Consensus 75 ~~~~~~--~~~~----~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 75 TFAAES--ALPG----SLTHISTDHQGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp EEEEEE--ECSS----CCSEEEECTTSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE
T ss_pred eecccc--ccCC----CCcEEEEcCCCCEEEEEecCCCeEEEEECC-CCccccccccccCCCCceEEEECCCCCEEEEec
Confidence 555432 1122 38899999999965 2 2334444331 11 1234689999999996 88776
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCC-CeeEEE------eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC--CC
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKT-KKNKVL------IANLHFANGVELSADESFVIVAETMSSRVHRYYLKG--PK 280 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~-~~~~~~------~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g--~~ 280 (337)
.. .+.|..+|..+ ++.... ......|++++++|||+.+|++....++|..++++. +.
T Consensus 148 ~~--------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 148 LK--------------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp GG--------------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred CC--------------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 43 24677777655 544321 122357899999999999999998889999999853 21
Q ss_pred CCceeeeecCCC------CCCCceeECCCCC-EEEEec
Q psy4771 281 QGKSEVFIDGLP------GLPDNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 281 ~~~~~~~~~~~~------g~Pdgi~~d~dG~-l~va~~ 311 (337)
......+.. .+ ..|.+++++++|+ +|++..
T Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 214 IECVQTLDM-MPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp CEEEEEEEC-SCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred EEEEeeccc-cCccccccCCccceEECCCCCEEEEEec
Confidence 111122211 11 1344699999996 776664
No 85
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.29 E-value=2.1e-11 Score=113.16 Aligned_cols=160 Identities=12% Similarity=0.138 Sum_probs=104.4
Q ss_pred cCCcceEEECCCCc-EEEEECCCcEEEEEcCCCeEE-EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCC
Q psy4771 111 CGRPLGIKFDKNGA-LHVADAYFGLYKVNVTTGQTE-QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDG 188 (337)
Q Consensus 111 ~~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~~g~~~-~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~ 188 (337)
+..|.+|+++++|+ |||++....|++++.+ +... .+... |. + ..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~-----------~~-v---------------------~~ 62 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGV-----------PD-V---------------------WA 62 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSC-----------CC-C---------------------CC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCC-----------cc-c---------------------cc
Confidence 46799999999999 9999975568889875 4332 12210 00 0 00
Q ss_pred CCCCCCccEEEcC----CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCC-----eeEEEec-------cccceeeE
Q psy4771 189 AKPQIPNSVTVDS----DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK-----KNKVLIA-------NLHFANGV 252 (337)
Q Consensus 189 ~~~~~pn~v~vd~----~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~-----~~~~~~~-------~~~~p~gi 252 (337)
.....+++|++++ +|.||+++..... ++ ....+|++++.+.+ ..+++.. ..+++++|
T Consensus 63 ~g~~g~~gia~~pdf~~~g~lYv~~~~~~~-~g------~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l 135 (353)
T 2g8s_A 63 HGQGGLLDVVLAPDFAQSRRIWLSYSEVGD-DG------KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRL 135 (353)
T ss_dssp STTCSEEEEEECTTHHHHCEEEEEEEEECS-SS------CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCE
T ss_pred CCCCCceeEEECCCCCCCCEEEEEEeCCCC-CC------CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccE
Confidence 0234579999998 5889999764210 00 00236777655432 2233332 23568899
Q ss_pred EEccCCCEEEEEeCC-------------CCEEEEEEeeCCCC----------CceeeeecCCCCCCCceeECC-CCCEEE
Q psy4771 253 ELSADESFVIVAETM-------------SSRVHRYYLKGPKQ----------GKSEVFIDGLPGLPDNVKRDS-KGNFLV 308 (337)
Q Consensus 253 a~~~dg~~lyva~~~-------------~~~I~~~~~~g~~~----------~~~~~~~~~~~g~Pdgi~~d~-dG~l~v 308 (337)
++++|| .|||+... .++|+|++.+|.-. ...++++.++.. |.||++|+ +|+||+
T Consensus 136 ~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 136 VFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNALWL 213 (353)
T ss_dssp EECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEEEE
T ss_pred EECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCEEE
Confidence 999999 79999643 35899999886410 134566655443 99999999 799999
Q ss_pred EecCC
Q psy4771 309 SLVCP 313 (337)
Q Consensus 309 a~~~~ 313 (337)
+....
T Consensus 214 ~d~g~ 218 (353)
T 2g8s_A 214 NEHGP 218 (353)
T ss_dssp EEECS
T ss_pred EecCC
Confidence 99764
No 86
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.28 E-value=1.2e-09 Score=101.05 Aligned_cols=178 Identities=12% Similarity=0.107 Sum_probs=114.3
Q ss_pred CCcceEEECCCCc-EEEEECCCcEEEEEcC-CCeEEEEeccccccCCCCCCCCCceeeCCCCCc--c--c----------
Q psy4771 112 GRPLGIKFDKNGA-LHVADAYFGLYKVNVT-TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQT--G--Q---------- 175 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~-~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~--~--~---------- 175 (337)
..|.+++++++|+ ||+++.. .|..++.+ +|+...+... ...| .|+.+++++||+. + .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~--~~~g----~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH--PIGG----HPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE--ECCS----SGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe--ecCC----CCccEEECCCCCEEEEEEecCCcceeccc
Confidence 4689999999995 8888765 67667664 6766544321 1123 2788999999983 3 1
Q ss_pred -----ccceeeeccccCC-----------CCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCC-CC
Q psy4771 176 -----TEQLISMDTEIDG-----------AKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TK 237 (337)
Q Consensus 176 -----~~~v~~~~~~~~~-----------~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~ 237 (337)
.+.+..+....++ .....++++++++||+ +|+++... +.|+.|+.+ ++
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~--------------~~v~~~~~~~~g 178 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA--------------NKLWTHRKLASG 178 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT--------------TEEEEEEECTTS
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC--------------CEEEEEEECCCC
Confidence 1223332211111 1235689999999997 88887642 266666665 56
Q ss_pred eeEEEe--c---cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCce----eeeecCCC----C---------CC
Q psy4771 238 KNKVLI--A---NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKS----EVFIDGLP----G---------LP 295 (337)
Q Consensus 238 ~~~~~~--~---~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~----~~~~~~~~----g---------~P 295 (337)
+...+. . ....|.+++++|||++||+++...++|.+|+++.. .+.. ..+. .++ + .|
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 256 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFP-LIPPGIPDRDPETGKGLYR 256 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEE
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEE-cCCCCcCCccccccccccc
Confidence 543221 1 24579999999999999999988889999987631 1111 1111 121 1 37
Q ss_pred Ccee-ECCCCC-EEEEecC
Q psy4771 296 DNVK-RDSKGN-FLVSLVC 312 (337)
Q Consensus 296 dgi~-~d~dG~-l~va~~~ 312 (337)
.+++ +++||+ +|++...
T Consensus 257 ~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 257 ADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEEECTTSSEEEEEEEE
T ss_pred ccEEEECCCCCEEEEECCC
Confidence 7899 999997 7887643
No 87
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.27 E-value=1.9e-10 Score=109.00 Aligned_cols=223 Identities=10% Similarity=-0.022 Sum_probs=132.0
Q ss_pred eCCeEE-EEecC----cEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC----------CcE
Q psy4771 71 HKGDLY-MGVDG----GHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY----------FGL 134 (337)
Q Consensus 71 ~~g~ly-~d~~~----g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~----------~gv 134 (337)
+...+| ++... ++|..+|..+.+.+..+ +....| |+++++|| .|||++.. +.|
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I----------~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMT----------DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE----------EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE----------ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEE
Confidence 456789 55543 79999998554444333 333569 99999999 89999842 349
Q ss_pred EEEEcCCCeEEEEeccc--ccc-CCCCCCCCCceeeCCCCCcc-----c-ccceeeeccccCCC----CC-----CCCcc
Q psy4771 135 YKVNVTTGQTEQLISMD--TEI-DGAKPQIPNSVTVDSDGQTG-----Q-TEQLISMDTEIDGA----KP-----QIPNS 196 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~--~~~-~g~~~~~P~~v~~~~~g~~~-----~-~~~v~~~~~~~~~~----~~-----~~pn~ 196 (337)
..||..++++..-+... ... .|. .|+++++++||+++ . .+.|..++..-... +. ..|.+
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~---~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g 228 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGT---YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPAS 228 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSC---CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred EEEECCCCcEEEEEECCCccccccCC---CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCC
Confidence 99999988765443210 000 122 59999999999987 2 34666666221110 11 11223
Q ss_pred ----EEEcCCCcEEEEcCCCCc-----------------------cCceeeeeecCCccEEEEcCCCCeeEEEec-----
Q psy4771 197 ----VTVDSDGMVYWSDSSTKY-----------------------KSGLFEGLTSGSGRLIQYNPKTKKNKVLIA----- 244 (337)
Q Consensus 197 ----v~vd~~G~lyvtd~~~~~-----------------------~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~----- 244 (337)
+++.++|++.+.+..... .++-........|.|+.+|..++.......
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~ 308 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALT 308 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSC
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecc
Confidence 667778874433332110 000000111234677888876554332211
Q ss_pred -----cccceee---EEEccCCCEEEEEeC---------CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC--
Q psy4771 245 -----NLHFANG---VELSADESFVIVAET---------MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-- 305 (337)
Q Consensus 245 -----~~~~p~g---ia~~~dg~~lyva~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-- 305 (337)
....|.| +++++|++++||++. ..+.|.++|....+.. ..+ . ++..|++|++++||+
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv--~~I-~-vg~~P~gia~spDg~~~ 384 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI--NKI-E-LGHEIDSINVSQDAEPL 384 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEE-E-EEEEECEEEECCSSSCE
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE--EEE-E-CCCCcCeEEEccCCCEE
Confidence 0123555 899999999999974 2468999997543211 111 1 234599999999998
Q ss_pred EEEEec
Q psy4771 306 FLVSLV 311 (337)
Q Consensus 306 l~va~~ 311 (337)
+|++.+
T Consensus 385 lyv~n~ 390 (426)
T 3c75_H 385 LYALSA 390 (426)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 666664
No 88
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.27 E-value=8e-11 Score=112.83 Aligned_cols=169 Identities=15% Similarity=0.227 Sum_probs=108.7
Q ss_pred ccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCC
Q psy4771 110 QCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDG 188 (337)
Q Consensus 110 ~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~ 188 (337)
.+..|.+|+++++|+|||++...+ |++++..+|+...+......... .
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~-------------------------------~ 73 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVND-------------------------------A 73 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCC-------------------------------T
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccc-------------------------------c
Confidence 356799999999999999997654 99998776776655431100000 0
Q ss_pred CCCCCCccEEEcC----CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCC--e---eEEEec-----cccceeeEEE
Q psy4771 189 AKPQIPNSVTVDS----DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK--K---NKVLIA-----NLHFANGVEL 254 (337)
Q Consensus 189 ~~~~~pn~v~vd~----~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~--~---~~~~~~-----~~~~p~gia~ 254 (337)
.....+.+|++++ +|.||++++...... .........+|+|++.+.+ + .+++.+ ..+++++|++
T Consensus 74 ~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~--~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f 151 (454)
T 1cru_A 74 DGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS--TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVI 151 (454)
T ss_dssp TSSCSEEEEEECTTTTTSCEEEEEEEEECTTC----CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEE
T ss_pred CCCCceeEEEECCCcCcCCEEEEEEeccccCC--CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeE
Confidence 0124567999998 678999986310000 0000000236777664321 1 233332 3467899999
Q ss_pred ccCCCEEEEEeCC--------------------------------CCEEEEEEeeCCCC-C-------ceeeeecCCCCC
Q psy4771 255 SADESFVIVAETM--------------------------------SSRVHRYYLKGPKQ-G-------KSEVFIDGLPGL 294 (337)
Q Consensus 255 ~~dg~~lyva~~~--------------------------------~~~I~~~~~~g~~~-~-------~~~~~~~~~~g~ 294 (337)
++||+ |||+... .++|+|++.+|.-. . ..++++.++..
T Consensus 152 ~pDG~-Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RN- 229 (454)
T 1cru_A 152 GPDQK-IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRN- 229 (454)
T ss_dssp CTTSC-EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSE-
T ss_pred CCCCe-EEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCC-
Confidence 99994 9998542 36899999876411 1 34677765544
Q ss_pred CCceeECCCCCEEEEecCC
Q psy4771 295 PDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 295 Pdgi~~d~dG~l~va~~~~ 313 (337)
|.||++|++|.||++....
T Consensus 230 p~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 230 PQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp EEEEEECTTSCEEEEEECS
T ss_pred cceEEECCCCCEEEEecCC
Confidence 9999999999999999764
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=6.8e-10 Score=99.28 Aligned_cols=208 Identities=8% Similarity=-0.012 Sum_probs=134.0
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccc
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~ 151 (337)
++.|+++..+++|+.++..+.+.+.++.. +....+++++++++|+++++ ..++|+.+|+++..+..+...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~--------~~~~~~~~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~- 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPL--------EKGWECNSVAATKAGEILFS-YSKGAKMITRDGRELWNIAAP- 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEEC--------CTTCCCCEEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECC-
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCC--------CccCCCcCeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCC-
Confidence 44566888899999998744333333321 11135889999999999995 346799999954444444321
Q ss_pred cccCCCCCCCCCceeeCCCCCcc----c-ccceeeeccccC-----------CCCCCCCccEEEcCCCcEEEEcCCCCcc
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTG----Q-TEQLISMDTEID-----------GAKPQIPNSVTVDSDGMVYWSDSSTKYK 215 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~----~-~~~v~~~~~~~~-----------~~~~~~pn~v~vd~~G~lyvtd~~~~~~ 215 (337)
.+. ....+.+.++|+++ . ...++.++...+ ...+..+.+++++++|++++++..
T Consensus 75 ---~~~---~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~---- 144 (276)
T 3no2_A 75 ---AGC---EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA---- 144 (276)
T ss_dssp ---TTC---EEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT----
T ss_pred ---CCc---cccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC----
Confidence 000 12346677888887 2 335554442110 012345778899999999888865
Q ss_pred CceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee-CCCCCceeeeecCCC--
Q psy4771 216 SGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLK-GPKQGKSEVFIDGLP-- 292 (337)
Q Consensus 216 ~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~-g~~~~~~~~~~~~~~-- 292 (337)
+++|+.+|++ |+...-......|.++++.++|+ ++|++...++|..++.+ |...-+.. ...++
T Consensus 145 ----------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~--~~~~~~~ 210 (276)
T 3no2_A 145 ----------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVN--ANDIEGV 210 (276)
T ss_dssp ----------TTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEE--GGGSBSC
T ss_pred ----------CCEEEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEec--CCCCCCc
Confidence 3589999988 65433333335688899999885 77888888899999987 43111111 01111
Q ss_pred --CCCCceeECCCCCEEEEecCC
Q psy4771 293 --GLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 293 --g~Pdgi~~d~dG~l~va~~~~ 313 (337)
..|.++++.++|++||+.+.+
T Consensus 211 ~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 211 QLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp CCSEEEEEEECTTSCEEEEEECT
T ss_pred cccccccceEcCCCCEEEEeccC
Confidence 237899999999999999755
No 90
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.25 E-value=1.7e-09 Score=100.16 Aligned_cols=180 Identities=15% Similarity=0.208 Sum_probs=128.8
Q ss_pred CccEEEe-eCC-eEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC-CcEEEEE
Q psy4771 64 GPEAVVK-HKG-DLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY-FGLYKVN 138 (337)
Q Consensus 64 ~P~~i~~-~~g-~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~-~gv~~vd 138 (337)
.|.++++ .++ .+| ++..++.|..|+..+.+.+..+ .....+.+++++++| .||++... ..|..+|
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~----------~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV----------PAGSSPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE----------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE----------ECCCCccceEECCCCCEEEEEECCCCEEEEEE
Confidence 4778888 444 576 6778999999997333322222 112368899999999 57888765 4499999
Q ss_pred cCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCc
Q psy4771 139 VTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSG 217 (337)
Q Consensus 139 ~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~ 217 (337)
.++++...... ....+.+++++++|+ +|++...
T Consensus 103 ~~~~~~~~~~~----------------------------------------~~~~~~~~~~s~dg~~l~~~~~~------ 136 (391)
T 1l0q_A 103 TTSNTVAGTVK----------------------------------------TGKSPLGLALSPDGKKLYVTNNG------ 136 (391)
T ss_dssp TTTTEEEEEEE----------------------------------------CSSSEEEEEECTTSSEEEEEETT------
T ss_pred CCCCeEEEEEe----------------------------------------CCCCcceEEECCCCCEEEEEeCC------
Confidence 98887655442 122468999999987 7777654
Q ss_pred eeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCc
Q psy4771 218 LFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDN 297 (337)
Q Consensus 218 ~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdg 297 (337)
++.|+.+|..+++..........+.++++++|++.||++....++|..+++... ....... ....+.+
T Consensus 137 --------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~-~~~~~~~ 204 (391)
T 1l0q_A 137 --------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---SVIDTVK-VEAAPSG 204 (391)
T ss_dssp --------TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEE-CSSEEEE
T ss_pred --------CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---eEEEEEe-cCCCccc
Confidence 358999998888776666556678999999999999999988899999997543 2111122 2335788
Q ss_pred eeECCCCC-EEEEec
Q psy4771 298 VKRDSKGN-FLVSLV 311 (337)
Q Consensus 298 i~~d~dG~-l~va~~ 311 (337)
++++++|+ +|++..
T Consensus 205 ~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEEec
Confidence 99999997 777763
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.24 E-value=1.2e-09 Score=101.17 Aligned_cols=222 Identities=13% Similarity=0.106 Sum_probs=127.5
Q ss_pred cCccEEEe-eCC-eEEEEecCcEEEEEe---CCceeEEEecCccccCccccCccCCcceEEECCCCc-EE--EEE-----
Q psy4771 63 HGPEAVVK-HKG-DLYMGVDGGHILKLS---GGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LH--VAD----- 129 (337)
Q Consensus 63 ~~P~~i~~-~~g-~ly~d~~~g~I~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-ly--Vad----- 129 (337)
..|.++++ .++ .||+...+ .|..|+ .++...+... ...+.|.+++++++|+ || +++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~----------~~~g~~~~~~~spdg~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH----------PIGGHPRANDADTNTRAIFLLAAKQPPYA 108 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE----------ECCSSGGGGCTTSCCEEEEEEECSSTTCC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe----------ecCCCCccEEECCCCCEEEEEEecCCcce
Confidence 46889998 454 58855555 677665 3443322111 1113488899999996 33 443
Q ss_pred --C-----CCc-EEEEEcC-CCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----cccceeeeccccCC-------
Q psy4771 130 --A-----YFG-LYKVNVT-TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQLISMDTEIDG------- 188 (337)
Q Consensus 130 --~-----~~g-v~~vd~~-~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~~~------- 188 (337)
. ..+ +..++.+ .|+............+. .|+.+++++||+.+ ..+.|..++....+
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~ 185 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT---GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS 185 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTC---CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeCCCC---cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee
Confidence 1 222 4444443 24433222100000111 48889999999865 23455544422011
Q ss_pred ---C-CCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEE----Ee---ccc---c------
Q psy4771 189 ---A-KPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKV----LI---ANL---H------ 247 (337)
Q Consensus 189 ---~-~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~----~~---~~~---~------ 247 (337)
. ....|.++++++||+ +|+++.... .=.++.+|.++++... +. .++ .
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~------------~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 253 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGN------------RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKG 253 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTT------------EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSB
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCC------------eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccc
Confidence 0 134689999999996 888775321 0145556665565321 11 111 2
Q ss_pred -ceeeEE-EccCCCEEEEEeCCCC-----EEEEEEeeCCCCCceee---eecCCCCCCCceeECC---CCC-EEEEecC
Q psy4771 248 -FANGVE-LSADESFVIVAETMSS-----RVHRYYLKGPKQGKSEV---FIDGLPGLPDNVKRDS---KGN-FLVSLVC 312 (337)
Q Consensus 248 -~p~gia-~~~dg~~lyva~~~~~-----~I~~~~~~g~~~~~~~~---~~~~~~g~Pdgi~~d~---dG~-l~va~~~ 312 (337)
.+.+++ ++|||++||+++...+ +|.+|+++.. +.... +.......|.++++++ ||+ +|++...
T Consensus 254 ~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~--g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 254 LYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC--GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp SEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT--SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred cccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC--CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 588999 9999999999997766 8999998621 22221 2222233588999999 786 7777654
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.23 E-value=2.9e-09 Score=104.30 Aligned_cols=222 Identities=10% Similarity=0.017 Sum_probs=141.5
Q ss_pred CccEEEe--eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECC----CC-cEEEEECC-Cc
Q psy4771 64 GPEAVVK--HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK----NG-ALHVADAY-FG 133 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~----~G-~lyVad~~-~g 133 (337)
.|.++++ ++..+|+...++.|..|+. .+.+.+..+ .....|.++++++ +| .||+++.. ..
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i----------~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~ 249 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI----------KIGIEARSVESSKFKGYEDRYTIAGAYWPPQ 249 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE----------ECCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE----------ecCCCcceEEeCCCcCCCCCEEEEEEccCCe
Confidence 3788878 4567897777899999998 554443332 2335699999999 98 68888743 45
Q ss_pred EEEEEcCCCeEEEEecccc-ccCCCC---CCCCCceeeCCCCCcc-----cccceeeeccccCC-------CCCCCCccE
Q psy4771 134 LYKVNVTTGQTEQLISMDT-EIDGAK---PQIPNSVTVDSDGQTG-----QTEQLISMDTEIDG-------AKPQIPNSV 197 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~-~~~g~~---~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~~~-------~~~~~pn~v 197 (337)
|..+|..+++......... ...+.. ...+..++++++++.+ .++.|..++..-.. ....+|.++
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 8889988877655443110 011100 0124568888877664 33455544421100 023579999
Q ss_pred EEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecccccee---eEEE-ccCCCEEEEEeC-CCCEE
Q psy4771 198 TVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFAN---GVEL-SADESFVIVAET-MSSRV 271 (337)
Q Consensus 198 ~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~---gia~-~~dg~~lyva~~-~~~~I 271 (337)
+++++|+ +|++... ++.|..+|.+++++.........|+ |+.+ +|+++.+|++.. +.+.|
T Consensus 330 ~~spdg~~l~va~~~--------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V 395 (543)
T 1nir_A 330 GWDSSHRYFMTAANN--------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSI 395 (543)
T ss_dssp EECTTSCEEEEEEGG--------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE
T ss_pred eECCCCCEEEEEecC--------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceE
Confidence 9999998 7777654 2378889999988765554433443 5554 578668999875 56899
Q ss_pred EEEEeeCCCC----Cc-eeeeecCCCCCCCceeECCCCC-EEEEe
Q psy4771 272 HRYYLKGPKQ----GK-SEVFIDGLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 272 ~~~~~~g~~~----~~-~~~~~~~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
.+++.+..+. .+ ...+. ...+.+..++++++|+ |||+.
T Consensus 396 ~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 396 SLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp EEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCCEEEECC
T ss_pred EEEEeCCCCCchhcCeEEEEEE-cCCCCceEEEcCCCCCcEEEec
Confidence 9999875211 12 22222 2223367799999996 89886
No 93
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.22 E-value=1.8e-09 Score=100.25 Aligned_cols=224 Identities=16% Similarity=0.121 Sum_probs=125.9
Q ss_pred cCccEEEe--eCCeEEEEe----------cCcEEEEEeCCceeEEEec--CccccCccccCccCCcceEEECCCC-cEEE
Q psy4771 63 HGPEAVVK--HKGDLYMGV----------DGGHILKLSGGKLVPVVKL--GKDCYGFKYEQQCGRPLGIKFDKNG-ALHV 127 (337)
Q Consensus 63 ~~P~~i~~--~~g~ly~d~----------~~g~I~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyV 127 (337)
..| .+++ ++..+|+.. .++.|..|+..+.+.+..+ +.. .......|.+++++++| .|||
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-----~~~~g~~p~~i~~spdg~~l~v 124 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-----RVQGLNYDGLFRQTTDGKFIVL 124 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT-----BCCBCCCGGGEEECTTSSEEEE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc-----ccccCCCcceEEECCCCCEEEE
Confidence 368 8888 456799543 3567999987544333222 110 00123569999999999 7899
Q ss_pred EECC--CcEEEEEcCCCeEEEE-eccccccCCC--CCCCCCc----eeeCCCCCcc-----ccccee-------------
Q psy4771 128 ADAY--FGLYKVNVTTGQTEQL-ISMDTEIDGA--KPQIPNS----VTVDSDGQTG-----QTEQLI------------- 180 (337)
Q Consensus 128 ad~~--~gv~~vd~~~g~~~~l-~~~~~~~~g~--~~~~P~~----v~~~~~g~~~-----~~~~v~------------- 180 (337)
++.. ..|..+|.+++++... ... .+. ....|.+ ++..++|+++ ..+.+.
T Consensus 125 ~n~~~~~~v~v~d~~~~~~~~~~i~~----~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 125 QNASPATSIGIVDVAKGDYVEDVTAA----AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEESSSEEEEEEETTTTEEEEEEGGG----TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred ECCCCCCeEEEEECCCCcEEEEEecC----CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 9753 3499999988876543 221 110 0012322 5556666554 112221
Q ss_pred ------------------------eeccccCC------------------CCCCCCccEEEcCCC-cEEEEcC-CCCccC
Q psy4771 181 ------------------------SMDTEIDG------------------AKPQIPNSVTVDSDG-MVYWSDS-STKYKS 216 (337)
Q Consensus 181 ------------------------~~~~~~~~------------------~~~~~pn~v~vd~~G-~lyvtd~-~~~~~~ 216 (337)
.++..-.. .....+..++++++| ++|++.. ....
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~-- 278 (361)
T 2oiz_A 201 DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE-- 278 (361)
T ss_dssp SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT--
T ss_pred CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc--
Confidence 11100000 000111225666654 3665542 1000
Q ss_pred ceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCC
Q psy4771 217 GLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPD 296 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pd 296 (337)
+ ...+..+.|+.+|.++++...-..... |.+|+++|||++||+++. +.|.+|+.+..++.....+. .....|.
T Consensus 279 ~---~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~-~~G~~P~ 351 (361)
T 2oiz_A 279 G---THKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIE-GAAEASL 351 (361)
T ss_dssp T---CTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEET-TSCSSEE
T ss_pred c---cccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEec-cCCCCcE
Confidence 0 000123579999999887654444444 999999999999999985 89999987643112222221 2334699
Q ss_pred ceeECCCCC
Q psy4771 297 NVKRDSKGN 305 (337)
Q Consensus 297 gi~~d~dG~ 305 (337)
+|+++++|+
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 999999985
No 94
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.21 E-value=4.1e-09 Score=97.56 Aligned_cols=180 Identities=16% Similarity=0.189 Sum_probs=126.4
Q ss_pred CccEEEe-e-CCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCc-EEEEE
Q psy4771 64 GPEAVVK-H-KGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFG-LYKVN 138 (337)
Q Consensus 64 ~P~~i~~-~-~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~g-v~~vd 138 (337)
.+.++++ . +..+| ++..++.|..|+..+.+.+..+ .....+.+++++++|+ ||++....+ |..+|
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV----------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE----------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE----------eCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 5777888 3 45577 6667799999987433322222 1124588999999995 778876544 88899
Q ss_pred cCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCc
Q psy4771 139 VTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSG 217 (337)
Q Consensus 139 ~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~ 217 (337)
..+++...... ....+.+++++++|+ +|++...
T Consensus 145 ~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~dg~~l~~~~~~------ 178 (391)
T 1l0q_A 145 TVTKAVINTVS----------------------------------------VGRSPKGIAVTPDGTKVYVANFD------ 178 (391)
T ss_dssp TTTTEEEEEEE----------------------------------------CCSSEEEEEECTTSSEEEEEETT------
T ss_pred CCCCcEEEEEe----------------------------------------cCCCcceEEECCCCCEEEEEeCC------
Confidence 88877655442 123468999999986 7777654
Q ss_pred eeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC--CCCEEEEEEeeCCCCCceeeeecCCCCCC
Q psy4771 218 LFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET--MSSRVHRYYLKGPKQGKSEVFIDGLPGLP 295 (337)
Q Consensus 218 ~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~--~~~~I~~~~~~g~~~~~~~~~~~~~~g~P 295 (337)
+|.|+.+|..+++..........+.++++++||+.||++.. ..+.|..+++... ....... ....|
T Consensus 179 --------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~---~~~~~~~-~~~~~ 246 (391)
T 1l0q_A 179 --------SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN---KITARIP-VGPDP 246 (391)
T ss_dssp --------TTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT---EEEEEEE-CCSSE
T ss_pred --------CCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC---eEEEEEe-cCCCc
Confidence 35899999988877666656667899999999999999986 6789999997543 1111122 12347
Q ss_pred CceeECCCCC-EEEEec
Q psy4771 296 DNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 296 dgi~~d~dG~-l~va~~ 311 (337)
..++++++|+ +|++..
T Consensus 247 ~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALS 263 (391)
T ss_dssp EEEEECTTSSEEEEEET
T ss_pred cEEEEccCCCEEEEEcC
Confidence 8899999996 777754
No 95
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.21 E-value=5.4e-09 Score=94.08 Aligned_cols=229 Identities=13% Similarity=0.067 Sum_probs=140.3
Q ss_pred CccEEEe-eCC-eEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEE----------
Q psy4771 64 GPEAVVK-HKG-DLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVAD---------- 129 (337)
Q Consensus 64 ~P~~i~~-~~g-~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad---------- 129 (337)
.|.++++ .++ .+| ++..+++|..|+..+.+.+..+..... ......|.+++++++| .||+++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP----EERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT----TEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc----ccccccccceEECCCCCEEEEEecccccccccc
Confidence 3888888 454 677 677788999998633222221210000 0011268899999999 788885
Q ss_pred --CCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc--cccceeeeccccCC-----CCCCCCccEEEc
Q psy4771 130 --AYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG--QTEQLISMDTEIDG-----AKPQIPNSVTVD 200 (337)
Q Consensus 130 --~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~~~~v~~~~~~~~~-----~~~~~pn~v~vd 200 (337)
....|..+|.++++...... . +. .|..++++++|+.+ ..+.+..++..-.. .....+..++++
T Consensus 111 ~~~~~~i~v~d~~~~~~~~~~~----~-~~---~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s 182 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRKAFE----A-PR---QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQ 182 (337)
T ss_dssp EECCCEEEEEETTTTEEEEEEE----C-CS---SCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCC
T ss_pred cccCceEEEEECCCCcEEEEEe----C-CC---CcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCCceeC
Confidence 23569999998887655443 1 22 37889999999966 44455555422100 012235677788
Q ss_pred CCCc-EEEEcCCCCccCceeeeeecCC----------ccEEEEcCCCCeeEEE--eccccceeeEEEccCCCEEEEEeCC
Q psy4771 201 SDGM-VYWSDSSTKYKSGLFEGLTSGS----------GRLIQYNPKTKKNKVL--IANLHFANGVELSADESFVIVAETM 267 (337)
Q Consensus 201 ~~G~-lyvtd~~~~~~~~~~~~~~~~~----------G~v~~~d~~~~~~~~~--~~~~~~p~gia~~~dg~~lyva~~~ 267 (337)
++|. +|++......-...+. ..... ..|+.+|.++++.... ......++++++++||+.||++
T Consensus 183 ~dg~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--- 258 (337)
T 1pby_B 183 PDVLAVWNQHESSGVMATPFY-TARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--- 258 (337)
T ss_dssp CBCCCCCCCCTTTTEEEEEEE-EEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---
T ss_pred CCccEEeeeccCCCceeeeee-ccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---
Confidence 8876 7766544221000000 01111 1689999998876422 1223468899999999999999
Q ss_pred CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEEecC
Q psy4771 268 SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 268 ~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
.++|.+++++..+ ...... .+..|.+++++++|+ +|++...
T Consensus 259 ~~~v~~~d~~~~~---~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 259 YNVLESFDLEKNA---SIKRVP-LPHSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp ESEEEEEETTTTE---EEEEEE-CSSCCCEEEECTTSCEEEEESBS
T ss_pred CCeEEEEECCCCc---Ccceec-CCCceeeEEECCCCCEEEEEcCC
Confidence 4799999975432 111122 234589999999997 8887543
No 96
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.20 E-value=8.6e-10 Score=102.68 Aligned_cols=240 Identities=8% Similarity=-0.106 Sum_probs=133.8
Q ss_pred CeEE-EEecCc----EEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC----------CcEEE
Q psy4771 73 GDLY-MGVDGG----HILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY----------FGLYK 136 (337)
Q Consensus 73 g~ly-~d~~~g----~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~----------~gv~~ 136 (337)
..+| ++...+ +|..+|..+.+.+..+ +....| |++++++| .+||++.+ +.|..
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i----------~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHS----------LGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEE----------EECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEE----------eCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 4677 555555 8889998554444333 334568 99999998 99999842 33999
Q ss_pred EEcCCCeEEEEeccc--cc-cCCCCCCCCCceeeCCCCCcc-----c-ccceee--ecccc----C--CCCCCCCcc---
Q psy4771 137 VNVTTGQTEQLISMD--TE-IDGAKPQIPNSVTVDSDGQTG-----Q-TEQLIS--MDTEI----D--GAKPQIPNS--- 196 (337)
Q Consensus 137 vd~~~g~~~~l~~~~--~~-~~g~~~~~P~~v~~~~~g~~~-----~-~~~v~~--~~~~~----~--~~~~~~pn~--- 196 (337)
||+.++++..-+... .. ..|. .|+.+++++||+++ . .+.+.. ++..- . +...-.|.+
T Consensus 101 iD~~T~~vv~~I~v~~~~~~~~g~---~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~ 177 (368)
T 1mda_H 101 FDPVTFLPIADIELPDAPRFSVGP---RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAAT 177 (368)
T ss_dssp ECTTTCCEEEEEEETTSCSCCBSC---CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTE
T ss_pred EECCCCCEEEEEECCCccccccCC---CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeE
Confidence 999988765544210 00 0112 59999999999987 1 234555 44321 0 000011222
Q ss_pred -EEEcCCCcEEEEcCCC-----C-cc------------------CceeeeeecCCccEEEEcCCCCeeEEEec-------
Q psy4771 197 -VTVDSDGMVYWSDSST-----K-YK------------------SGLFEGLTSGSGRLIQYNPKTKKNKVLIA------- 244 (337)
Q Consensus 197 -v~vd~~G~lyvtd~~~-----~-~~------------------~~~~~~~~~~~G~v~~~d~~~~~~~~~~~------- 244 (337)
++..++|++.+.|... . .. +... +.... |.|+.+|..+++.+....
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~-~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~ 255 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML-VWAVA-SSILQGDIPAAGATMKAAIDGNESG 255 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE-EECBS-SCCEEEECCSSCCEEECCCCSSCTH
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEE-EEEcC-CEEEEEECCCCcceEEEEEEecccc
Confidence 3333444422222221 0 00 0000 01111 678888876543322211
Q ss_pred ---cccceee---EEEccCCCEEEEEeC---C-----CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEE
Q psy4771 245 ---NLHFANG---VELSADESFVIVAET---M-----SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVS 309 (337)
Q Consensus 245 ---~~~~p~g---ia~~~dg~~lyva~~---~-----~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va 309 (337)
....|.| +++++|++++||+.. + .+.+.++|....+.. .. +. .+..|.||++++||+ +|++
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--~~-i~-vg~~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS--GP-IS-NGHDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE--EC-CE-EEEEECEEEECCSSSCEEEE
T ss_pred ccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE--EE-EE-CCCCcceEEECCCCCEEEEE
Confidence 1234666 899999999999865 3 356778887643211 11 11 223599999999997 8999
Q ss_pred ec-CC----CCCchhhccccCCCccccc
Q psy4771 310 LV-CP----VEQPSEQAGNIRDPAGAQA 332 (337)
Q Consensus 310 ~~-~~----~~~p~~~~~~~~~p~~~~~ 332 (337)
.. .. --...-.+.+..+|-...|
T Consensus 332 ~~~~~~~VsVID~~t~kvv~~I~vg~~P 359 (368)
T 1mda_H 332 NSAGTEVLDIYDAASDQDQSSVELDKGP 359 (368)
T ss_dssp EETTTTEEEEEESSSCEEEEECCCCSCC
T ss_pred ccCCCCeEEEEECCCCcEEEEEECCCCC
Confidence 97 33 1123344555555544433
No 97
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.19 E-value=4.5e-09 Score=92.46 Aligned_cols=172 Identities=15% Similarity=0.051 Sum_probs=115.2
Q ss_pred cEEEeeCCeEE-EEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVKHKGDLY-MGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~~~g~ly-~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
+++.++++.|| +...+|+|.++|. ++..... ++ ......|++++.+ +||++++..+ ++.+|+++
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~----------~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL----------GNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC----------TTCCEEEEEECSS-CEEEEESSSCEEEEEETTT
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC----------CCcceeEEEEeCC-EEEEEEccCCEEEEEECCc
Confidence 67888889999 7777788888887 3432221 22 1123467888643 9999987655 99999988
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
.++..-+.. . ....+++.|. ++||++|. +
T Consensus 126 l~~~~ti~~----~------------------------------------~eGwGLt~Dg-~~L~vSdG-s--------- 154 (268)
T 3nok_A 126 PQRERTTRY----S------------------------------------GEGWGLCYWN-GKLVRSDG-G--------- 154 (268)
T ss_dssp TEEEEEEEC----S------------------------------------SCCCCEEEET-TEEEEECS-S---------
T ss_pred CcEEEEEeC----C------------------------------------CceeEEecCC-CEEEEECC-C---------
Confidence 776544431 1 1134566442 46999984 2
Q ss_pred eecCCccEEEEcCCCCeeEEEe----c--cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec------
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLI----A--NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID------ 289 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~----~--~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~------ 289 (337)
++|+.+|+++.+...-. . .+.++|.+.+. || .||++....+.|.++|++.++ ..-.++
T Consensus 155 -----~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~---V~~~Idl~~L~~ 224 (268)
T 3nok_A 155 -----TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGT---VVGVIDASALTR 224 (268)
T ss_dssp -----SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCB---EEEEEECHHHHH
T ss_pred -----CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCc---EEEEEECCCCcc
Confidence 38999999987653322 1 24467888877 67 699999999999999986432 211111
Q ss_pred -------CCCCCCCceeECCCC-CEEEEe
Q psy4771 290 -------GLPGLPDNVKRDSKG-NFLVSL 310 (337)
Q Consensus 290 -------~~~g~Pdgi~~d~dG-~l~va~ 310 (337)
.....|.|||.|+++ +|||+-
T Consensus 225 ~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 225 AVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 011358999999976 599976
No 98
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.18 E-value=8.2e-10 Score=105.80 Aligned_cols=176 Identities=12% Similarity=0.234 Sum_probs=111.9
Q ss_pred CceeccCcccCccEEEe-eCCeEEEEecC-cEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECC----CCcE
Q psy4771 54 AEKLFENEIHGPEAVVK-HKGDLYMGVDG-GHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK----NGAL 125 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~~g~ly~d~~~-g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~----~G~l 125 (337)
++.++++ +..|.+|++ .+|.+|+.... ++|++++. +....+..+..... .....+.+.||++++ +|.|
T Consensus 19 ~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~---~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 19 KKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVN---DADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp EEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCC---CTTSSCSEEEEEECTTTTTSCEE
T ss_pred EEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccc---ccCCCCceeEEEECCCcCcCCEE
Confidence 4555554 678999999 78899955555 58999975 44444444432100 001235688999999 6799
Q ss_pred EEEECC-------------CcEEEEEcCCC--eE---EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 126 HVADAY-------------FGLYKVNVTTG--QT---EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 126 yVad~~-------------~gv~~vd~~~g--~~---~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
||+.+. ..|++++.+.+ .+ +.+... ..
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~---~p-------------------------------- 139 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAG---LP-------------------------------- 139 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEE---EC--------------------------------
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEc---CC--------------------------------
Confidence 999853 24777765322 22 222210 00
Q ss_pred CCCCCCCccEEEcCCCcEEEEcCCCCccC--ce----------------eeeeecCCccEEEEcCCCC-----------e
Q psy4771 188 GAKPQIPNSVTVDSDGMVYWSDSSTKYKS--GL----------------FEGLTSGSGRLIQYNPKTK-----------K 238 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~G~lyvtd~~~~~~~--~~----------------~~~~~~~~G~v~~~d~~~~-----------~ 238 (337)
......+++|++++||+|||+........ .. ..-.....|+|+|+++++. .
T Consensus 140 ~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~ 219 (454)
T 1cru_A 140 SSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVV 219 (454)
T ss_dssp CCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEE
T ss_pred CCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCc
Confidence 11234689999999999999854321000 00 0001123689999999865 4
Q ss_pred eEEEeccccceeeEEEccCCCEEEEEeCCCC
Q psy4771 239 NKVLIANLHFANGVELSADESFVIVAETMSS 269 (337)
Q Consensus 239 ~~~~~~~~~~p~gia~~~dg~~lyva~~~~~ 269 (337)
.++...++..|.|++++++| .||++|.+.+
T Consensus 220 ~ei~a~G~RNp~gla~dp~G-~L~~~d~g~~ 249 (454)
T 1cru_A 220 SHIYTLGHRNPQGLAFTPNG-KLLQSEQGPN 249 (454)
T ss_dssp CSEEEBCCSEEEEEEECTTS-CEEEEEECSS
T ss_pred ceEEEECCCCcceEEECCCC-CEEEEecCCC
Confidence 56778899999999999987 5999997654
No 99
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.18 E-value=1.1e-09 Score=102.20 Aligned_cols=221 Identities=12% Similarity=0.042 Sum_probs=129.7
Q ss_pred CccEEEe--eCCeEEEEe----------cCcEEEEEeCCceeEEEec--CccccCccccCccCCcceEEECCCC-cEEEE
Q psy4771 64 GPEAVVK--HKGDLYMGV----------DGGHILKLSGGKLVPVVKL--GKDCYGFKYEQQCGRPLGIKFDKNG-ALHVA 128 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~----------~~g~I~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVa 128 (337)
.|. +++ ++..+|+.. .++.|..||..+.+.+..+ +... .......|.++++++|| +|||+
T Consensus 80 ~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~----r~~~g~~P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 80 LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP----RFLVGTYPWMTSLTPDGKTLLFY 154 (386)
T ss_dssp SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC----CCCBSCCGGGEEECTTSSEEEEE
T ss_pred CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc----ccccCCCCceEEEcCCCCEEEEE
Confidence 685 888 456799443 3567999998554433322 2100 01123579999999999 79999
Q ss_pred ECC--CcEEEEEcCCCeEEEEeccccccCCCCCCCCCc----eeeCCCCCcc----cc-cceeeeccc-cCCCCCCCCcc
Q psy4771 129 DAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNS----VTVDSDGQTG----QT-EQLISMDTE-IDGAKPQIPNS 196 (337)
Q Consensus 129 d~~--~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~----v~~~~~g~~~----~~-~~v~~~~~~-~~~~~~~~pn~ 196 (337)
+.. +.|..||.+++++..-+.. .|.....|.+ +++.+||+++ .. +.+...... ++...-...+.
T Consensus 155 n~~~~~~VsVID~~t~~vv~tI~v----~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~ 230 (386)
T 3sjl_D 155 QFSPAPAVGVVDLEGKAFKRMLDV----PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINH 230 (386)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEEC----CSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSC
T ss_pred EcCCCCeEEEEECCCCcEEEEEEC----CCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccc
Confidence 753 4599999999887654431 1111113444 4788999987 22 444321111 11111111233
Q ss_pred EEEc-CCCcE-EEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec----------cccceee---EEEccCCCEE
Q psy4771 197 VTVD-SDGMV-YWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA----------NLHFANG---VELSADESFV 261 (337)
Q Consensus 197 v~vd-~~G~l-yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~----------~~~~p~g---ia~~~dg~~l 261 (337)
.+++ ++|++ |+++. |+|+.+|..++..++... ....|.| ++++++++++
T Consensus 231 ~~~~~~dG~~~~vs~~----------------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 231 PAYSQKAGRLVWPTYT----------------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp CEEETTTTEEEEEBTT----------------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ceeEcCCCcEEEEeCC----------------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 4554 68874 44442 488888877654432211 1112434 8899999999
Q ss_pred EEEeC---------CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC--EEEEecCC
Q psy4771 262 IVAET---------MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN--FLVSLVCP 313 (337)
Q Consensus 262 yva~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~--l~va~~~~ 313 (337)
||+.. ..++|+++|....+... ++- ++..|.+|++++||+ ||++....
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~-~i~---vg~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLA-KFE---MGHEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEE-EEE---EEEEECEEEECSSSSCEEEEEETTT
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEE-EEE---CCCCcceEEECCCCCeEEEEEcCCC
Confidence 99863 24789999986443211 111 123488999999996 67776543
No 100
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.17 E-value=1.1e-09 Score=106.74 Aligned_cols=192 Identities=11% Similarity=0.119 Sum_probs=120.0
Q ss_pred CCeEE-EEecCcEEEEEeCCceeEEE--ecCccccCccccCccCCcceEEEC--CCC-cEEEEE----------------
Q psy4771 72 KGDLY-MGVDGGHILKLSGGKLVPVV--KLGKDCYGFKYEQQCGRPLGIKFD--KNG-ALHVAD---------------- 129 (337)
Q Consensus 72 ~g~ly-~d~~~g~I~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~P~Gl~~d--~~G-~lyVad---------------- 129 (337)
+..+| ++..++||.|++....+... .+ +....|.|+++. +++ .+|++.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~i----------p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEI----------PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEEC----------SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeC----------CCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 45789 78889999999985543322 22 344679999984 676 788884
Q ss_pred -CCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EE
Q psy4771 130 -AYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VY 206 (337)
Q Consensus 130 -~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-ly 206 (337)
.+.+ +..||.++.++..-+. ..| .|.+++++++|+ +|
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~----Vgg------------------------------------~pd~~~~spdGk~~~ 210 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVL----VSG------------------------------------NLDNCDADYEGKWAF 210 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEE----ESS------------------------------------CCCCEEECSSSSEEE
T ss_pred cccCceEEEEECCCCeEEEEEE----eCC------------------------------------CccceEECCCCCEEE
Confidence 2223 7778888776655442 222 245555555554 45
Q ss_pred EEcCCCCc-----------cCceee--------eeec----CCccEEEEcCCC--Cee-EEEeccccceeeEEEccCCCE
Q psy4771 207 WSDSSTKY-----------KSGLFE--------GLTS----GSGRLIQYNPKT--KKN-KVLIANLHFANGVELSADESF 260 (337)
Q Consensus 207 vtd~~~~~-----------~~~~~~--------~~~~----~~G~v~~~d~~~--~~~-~~~~~~~~~p~gia~~~dg~~ 260 (337)
+|+..+.. .+++.. .... .-+.|.++|.++ ++. .....-...|.|+.++|||++
T Consensus 211 vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~ 290 (595)
T 1fwx_A 211 STSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKH 290 (595)
T ss_dssp EEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSE
T ss_pred EEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCE
Confidence 44433210 000000 0000 014688999887 433 233334468999999999999
Q ss_pred EEEEeCCCCEEEEEEeeCC------CCCc-eeeeecCC-CCCCCceeECCCCCEEEEecCC
Q psy4771 261 VIVAETMSSRVHRYYLKGP------KQGK-SEVFIDGL-PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 261 lyva~~~~~~I~~~~~~g~------~~~~-~~~~~~~~-~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+||++...++|.+|+.+.. ++.. ..+..+-. ...|..+++|++|++|++....
T Consensus 291 v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 291 LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLD 351 (595)
T ss_dssp EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTT
T ss_pred EEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecC
Confidence 9999999999999998631 1111 12222211 2249999999999999999766
No 101
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=5.5e-09 Score=98.60 Aligned_cols=195 Identities=15% Similarity=0.172 Sum_probs=116.6
Q ss_pred cCccEEEe-eCCeEE-EEecC------cEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEEC----
Q psy4771 63 HGPEAVVK-HKGDLY-MGVDG------GHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADA---- 130 (337)
Q Consensus 63 ~~P~~i~~-~~g~ly-~d~~~------g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~---- 130 (337)
..|+.+.+ .+| +| +...+ |.|+.+|..+.+.+.++... ......+.++.+.++++.+++..
T Consensus 138 s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~------~~~~~~~Yd~~~~p~~~~mvsS~wg~p 210 (462)
T 2ece_A 138 SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID------RGDQYLAYDFWWNLPNEVLVSSEWAVP 210 (462)
T ss_dssp EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB------CTTCCCCCCEEEETTTTEEEECBCCCH
T ss_pred CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC------CCCccccceEEECCCCCEEEEccCcCc
Confidence 36888888 677 77 55555 68999997655444443211 01223456688899986555532
Q ss_pred ----------------CCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCC
Q psy4771 131 ----------------YFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIP 194 (337)
Q Consensus 131 ----------------~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~p 194 (337)
.+.|..+|.+++++..-... |. ....|
T Consensus 211 ~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v-----g~--------------------------------~g~~P 253 (462)
T 2ece_A 211 NTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL-----GE--------------------------------ENRMA 253 (462)
T ss_dssp HHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES-----CT--------------------------------TEEEE
T ss_pred cccccccchhhhhhccCCEEEEEECCCCcEeeEEec-----CC--------------------------------CCCcc
Confidence 24588899887765443321 10 11246
Q ss_pred ccEEE--cCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-----c-----c-----------cccee
Q psy4771 195 NSVTV--DSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-----A-----N-----------LHFAN 250 (337)
Q Consensus 195 n~v~v--d~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-----~-----~-----------~~~p~ 250 (337)
..|.+ +++|+ +|++..-+ ..+.++.|+++..+.++..... . . ...|.
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~---------~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVS---------LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEE---------TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred ceeEeeECCCCCEEEEEEeee---------ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 77766 88886 88776400 0001223322221122211100 0 0 24689
Q ss_pred eEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc-e-eeeec------------CCCCCCCceeECCCCC-EEEEe
Q psy4771 251 GVELSADESFVIVAETMSSRVHRYYLKGPKQGK-S-EVFID------------GLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 251 gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~-~-~~~~~------------~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
+|++++||++|||++.+.+.|.+|++++..... . .+... .+.+.|.++++++||+ +||+.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999999999999999999986432111 1 12221 1234599999999996 99998
No 102
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=5.9e-09 Score=91.69 Aligned_cols=175 Identities=17% Similarity=0.096 Sum_probs=111.7
Q ss_pred cEEEeeCCeEE-EEecC--cEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVKHKGDLY-MGVDG--GHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~~~g~ly-~d~~~--g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
+++.+.++.|| +.-.. .+|.++|..+.+...... .+......|++++. ++||++++..+ ++.+|+++
T Consensus 46 qGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~--------l~~~~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIE--------LGKRYFGEGISDWK-DKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEE--------CCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred ceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEe--------cCCccceeEEEEeC-CEEEEEEeeCCEEEEEECcc
Confidence 67777788999 44333 389999874333232221 01112346788864 49999987655 99999988
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
.++..-+. ..+ ...+++.| .+.+|++|.+
T Consensus 117 ~~~~~ti~----~~~------------------------------------eG~glt~d-g~~L~~SdGs---------- 145 (262)
T 3nol_A 117 LRQVRSFN----YDG------------------------------------EGWGLTHN-DQYLIMSDGT---------- 145 (262)
T ss_dssp CCEEEEEE----CSS------------------------------------CCCCEEEC-SSCEEECCSS----------
T ss_pred CcEEEEEE----CCC------------------------------------CceEEecC-CCEEEEECCC----------
Confidence 76554432 111 23455543 2469998842
Q ss_pred eecCCccEEEEcCCCCeeEEEe------ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec--CC--
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLI------ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID--GL-- 291 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~------~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~--~~-- 291 (337)
++|+.+|+++.++..-. ..+..+|.+.+. +| .||++....+.|.++|+..++ ..-.++ ++
T Consensus 146 -----~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~ 215 (262)
T 3nol_A 146 -----PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGK---VTGIIDLNGILA 215 (262)
T ss_dssp -----SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCB---EEEEEECTTGGG
T ss_pred -----CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCc---EEEEEECCcCcc
Confidence 38999999987653221 124567888876 66 699999999999999986432 211111 01
Q ss_pred --------CCCCCceeECCCCC-EEEEe
Q psy4771 292 --------PGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 292 --------~g~Pdgi~~d~dG~-l~va~ 310 (337)
...|.|||.|++++ +||+.
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 12578999999865 99987
No 103
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.14 E-value=1e-09 Score=99.56 Aligned_cols=162 Identities=15% Similarity=0.191 Sum_probs=106.9
Q ss_pred cCCcceEEECC-CCcEEEEECCCc-EEEEEcCCCeEEEEeccccccC--CCCCCCCCceeeCCCCCcccccceeeecccc
Q psy4771 111 CGRPLGIKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEID--GAKPQIPNSVTVDSDGQTGQTEQLISMDTEI 186 (337)
Q Consensus 111 ~~~P~Gl~~d~-~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~--g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~ 186 (337)
...|.|.++|+ +|++|+++.+.+ |.++|++++.+..+.-+ ... |.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~--~~s~~g~----------------------------- 60 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVID--GASSNGD----------------------------- 60 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCT--TTCCSSC-----------------------------
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecC--CccccCC-----------------------------
Confidence 46799999987 579999998765 99999986655544211 111 21
Q ss_pred CCCCCCCCccEEE---cCCCcEEE-EcCCCCccCceeeeeecCCccEEEEcCC---CCeeEEEec--------------c
Q psy4771 187 DGAKPQIPNSVTV---DSDGMVYW-SDSSTKYKSGLFEGLTSGSGRLIQYNPK---TKKNKVLIA--------------N 245 (337)
Q Consensus 187 ~~~~~~~pn~v~v---d~~G~lyv-td~~~~~~~~~~~~~~~~~G~v~~~d~~---~~~~~~~~~--------------~ 245 (337)
+...+.+|.+ |++|+||+ ++.+..+.-. .........|++||+. +++.....+ .
T Consensus 61 ---~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~--g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~ 135 (334)
T 2p9w_A 61 ---GEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA--DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKR 135 (334)
T ss_dssp ---CSEEEEEEEESSSSSCCEEEEEEEETTTTCTT--SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSC
T ss_pred ---CcceeeEEEEeccCCCCcEEEEEccccccccc--ccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccccc
Confidence 2345789999 78999998 5533221000 0001234579999988 666543332 1
Q ss_pred ccceeeEEEccCCCEEEEEeCCC-CEEEEEEeeCCCCCceeeee-c-----CCCCCCCceeECCCCCEEEEecCC
Q psy4771 246 LHFANGVELSADESFVIVAETMS-SRVHRYYLKGPKQGKSEVFI-D-----GLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 246 ~~~p~gia~~~dg~~lyva~~~~-~~I~~~~~~g~~~~~~~~~~-~-----~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
...+|+|+++++|+ +||+++.. +.|+|++.+|.. ...|. + ...| +.||+++++|+++++....
T Consensus 136 ~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~---~~~~~~~~~~~~~~~G-~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 136 PFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKT---VSTFAWESGNGGQRPG-YSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp CEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCC---EEEEEECCCCSSSCCS-CSEEEEETTTTEEEEESSS
T ss_pred ccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCE---EeeeeecCCCcccccC-cceEEEeCCCCEEEEEcCC
Confidence 23599999999995 99999999 999999998752 23332 1 1223 7899999999855554333
No 104
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=1.3e-08 Score=88.77 Aligned_cols=184 Identities=16% Similarity=0.104 Sum_probs=115.4
Q ss_pred ccEEEeeCCeEEEEecC---cEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcC
Q psy4771 65 PEAVVKHKGDLYMGVDG---GHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVT 140 (337)
Q Consensus 65 P~~i~~~~g~ly~d~~~---g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~ 140 (337)
-+++.++++.||.+... .+|.++|..+.+...... .+......|++++. ++||++++..+ ++.+|++
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~--------l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAE--------VPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEE--------CCTTCCEEEEEEET-TEEEEEESSSSEEEEEETT
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEe--------CCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECC
Confidence 34677778899954443 489999974333222221 01122346778764 59999987655 9999998
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
+.++..-+. .. ..+-+++-| .++||++|.+
T Consensus 94 tl~~~~ti~----~~------------------------------------~~Gwglt~d-g~~L~vSdgs--------- 123 (243)
T 3mbr_X 94 TLTPRARFR----YP------------------------------------GEGWALTSD-DSHLYMSDGT--------- 123 (243)
T ss_dssp TTEEEEEEE----CS------------------------------------SCCCEEEEC-SSCEEEECSS---------
T ss_pred cCcEEEEEe----CC------------------------------------CCceEEeeC-CCEEEEECCC---------
Confidence 876554432 11 123455543 2469999842
Q ss_pred eeecCCccEEEEcCCCCeeEEEe----c--cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec--C--
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLI----A--NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID--G-- 290 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~----~--~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~--~-- 290 (337)
+.|+.+|+++.+...-. . .+.+.|.+.+. +| .||++...++.|.++|+..++ ..-.++ +
T Consensus 124 ------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~---V~~~idl~~l~ 192 (243)
T 3mbr_X 124 ------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGK---VVAWIDLQALV 192 (243)
T ss_dssp ------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCB---EEEEEECGGGS
T ss_pred ------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCC---EEEEEECCcCc
Confidence 38999999987653322 1 23466888765 56 699999999999999986432 111111 0
Q ss_pred ---------CCCCCCceeECCCC-CEEEEecCCCCCchhhc
Q psy4771 291 ---------LPGLPDNVKRDSKG-NFLVSLVCPVEQPSEQA 321 (337)
Q Consensus 291 ---------~~g~Pdgi~~d~dG-~l~va~~~~~~~p~~~~ 321 (337)
....|.|||.|+++ ++||+- +--|.|.+
T Consensus 193 ~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG---K~wp~~~~ 230 (243)
T 3mbr_X 193 PDADALTDSTNDVLNGIAFDAEHDRLFVTG---KRWPMLYE 230 (243)
T ss_dssp TTTTSCCCTTSSCEEEEEEETTTTEEEEEE---TTCSEEEE
T ss_pred cccccccCCcCCceEEEEEcCCCCEEEEEC---CCCCcEEE
Confidence 11257899999976 599987 22355544
No 105
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.12 E-value=7.1e-09 Score=97.27 Aligned_cols=187 Identities=17% Similarity=0.174 Sum_probs=127.0
Q ss_pred cEEEe-eCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCC-cEEEEEcCC
Q psy4771 66 EAVVK-HKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYF-GLYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~-gv~~vd~~~ 141 (337)
.++++ .++.+| ++..++.|..|+......+..+. .....+.+++++++| .+|++.... .|..+|.++
T Consensus 173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD---------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE---------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred eEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc---------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 34566 566666 77788999999864332222221 223568899999998 567787544 488899887
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCceee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFE 220 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~ 220 (337)
++...... ....+.+++++++|+ +|++......
T Consensus 244 ~~~~~~~~----------------------------------------~~~~~~~~~~~~~g~~l~~~~~~~~~------ 277 (433)
T 3bws_A 244 KLEIRKTD----------------------------------------KIGLPRGLLLSKDGKELYIAQFSASN------ 277 (433)
T ss_dssp TEEEEECC----------------------------------------CCSEEEEEEECTTSSEEEEEEEESCT------
T ss_pred CcEEEEec----------------------------------------CCCCceEEEEcCCCCEEEEEECCCCc------
Confidence 76544332 122378999999986 6666543210
Q ss_pred eeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
....+|.|+.+|..+++..........+.+++++++++.+|++....++|..+++++.+. ... .. ....|.++++
T Consensus 278 -~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~--~~~-~~-~~~~~~~~~~ 352 (433)
T 3bws_A 278 -QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV--QKS-IP-VFDKPNTIAL 352 (433)
T ss_dssp -TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE--EEE-EE-CSSSEEEEEE
T ss_pred -cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE--EEE-ec-CCCCCCeEEE
Confidence 012467899999988876555544457889999999999999999999999999864321 122 22 2344789999
Q ss_pred CCCCC-EEEEecC
Q psy4771 301 DSKGN-FLVSLVC 312 (337)
Q Consensus 301 d~dG~-l~va~~~ 312 (337)
+++|+ +|++...
T Consensus 353 s~dg~~l~~~~~~ 365 (433)
T 3bws_A 353 SPDGKYLYVSCRG 365 (433)
T ss_dssp CTTSSEEEEEECC
T ss_pred cCCCCEEEEEecC
Confidence 99997 7777653
No 106
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.08 E-value=5.3e-08 Score=87.78 Aligned_cols=204 Identities=12% Similarity=0.154 Sum_probs=129.2
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEec
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLIS 149 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~ 149 (337)
+.++.+|+...++.|++++... ....... ........++++++|+||++....+|+.+|++ |+......
T Consensus 105 ~~~~~l~v~t~~~~l~~~d~~g-~~~~~~~---------~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~ 173 (330)
T 3hxj_A 105 IFEDILYVTSMDGHLYAINTDG-TEKWRFK---------TKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFK 173 (330)
T ss_dssp EETTEEEEECTTSEEEEECTTS-CEEEEEE---------CSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred EECCEEEEEecCCEEEEEcCCC-CEEEEEc---------CCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEe
Confidence 3588999888888999998742 1121111 01122346788889999999765789999998 55443332
Q ss_pred cccccCCCCCCCCCceeeCCCCCcc--cccceeeeccccCC-----CCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 150 MDTEIDGAKPQIPNSVTVDSDGQTG--QTEQLISMDTEIDG-----AKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 150 ~~~~~~g~~~~~P~~v~~~~~g~~~--~~~~v~~~~~~~~~-----~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
. .+. ....++++++|+++ + +++..++..... ........++++++|+||++...
T Consensus 174 ~----~~~---~~~~~~~d~~g~l~v~t-~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~----------- 234 (330)
T 3hxj_A 174 T----NDA---ITSAASIGKDGTIYFGS-DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLD----------- 234 (330)
T ss_dssp C----SSC---CCSCCEECTTCCEEEES-SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEETT-----------
T ss_pred c----CCC---ceeeeEEcCCCEEEEEe-CEEEEECCCCcEEEEEccCCcceeceEECCCCeEEEEcCC-----------
Confidence 1 111 24557788888887 5 777776621100 11245778999999999988753
Q ss_pred ecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
|.|+++|+++...............+++++++ .||++.. .+.|++++.++.. ... ..........+.+|.
T Consensus 235 ----~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~-~ggl~~~d~~g~~---~~~-~~~~~~~~~~~~~d~ 304 (330)
T 3hxj_A 235 ----GHLYAINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSY-DGHLYAINPDGTE---KWN-FETGSWIIATPVIDE 304 (330)
T ss_dssp ----TEEEEECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECT-TCEEEEECTTSCE---EEE-EECSSCCCSCCEECT
T ss_pred ----CeEEEECCCCCEeEEeeCCCCccccceEcCCC-eEEEecC-CCCEEEECCCCcE---EEE-EEcCCccccceEEcC
Confidence 37788876544443333333345567777677 5998774 4589999854321 111 111122356788999
Q ss_pred CCCEEEEecCC
Q psy4771 303 KGNFLVSLVCP 313 (337)
Q Consensus 303 dG~l~va~~~~ 313 (337)
+|++|++...+
T Consensus 305 ~g~l~~gt~~G 315 (330)
T 3hxj_A 305 NGTIYFGTRNG 315 (330)
T ss_dssp TCCEEEECTTS
T ss_pred CCEEEEEcCCC
Confidence 99999999777
No 107
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.08 E-value=1.5e-08 Score=95.59 Aligned_cols=204 Identities=10% Similarity=0.042 Sum_probs=126.9
Q ss_pred eCCeEE-EEecCcEEEEEeCC----ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-------cEEEEE
Q psy4771 71 HKGDLY-MGVDGGHILKLSGG----KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-------GLYKVN 138 (337)
Q Consensus 71 ~~g~ly-~d~~~g~I~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-------gv~~vd 138 (337)
++..|| .+..+++|+.+|.. +.+.+..+ +.++-. ......+|+++.+.++| |||+..+. ++..+|
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~i-e~~~~~-~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVI-EPEEVK-KVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEE-CHHHHH-HHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeee-chhhcc-cccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 366788 78889999999852 22222222 100000 00012379999999999 99985432 499999
Q ss_pred cCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCC--cc
Q psy4771 139 VTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTK--YK 215 (337)
Q Consensus 139 ~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~--~~ 215 (337)
.+++++..-.. ..+. +...+.++.+.++++ +|.++++.- +.
T Consensus 171 ~~T~~v~~~~~----~~~~--------------------------------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 171 HYSFEPLGKWE----IDRG--------------------------------DQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp TTTCCEEEECC----SBCT--------------------------------TCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred CCCCeEEEEEc----cCCC--------------------------------CccccceEEECCCCCEEEEccCcCccccc
Confidence 99887665442 1111 234466888999987 666665421 10
Q ss_pred C-cee-eeeecCCccEEEEcCCCCeeEEEecc---ccceeeEEE--ccCCCEEEEEeC-----CCCEEEEEEeeCCCCCc
Q psy4771 216 S-GLF-EGLTSGSGRLIQYNPKTKKNKVLIAN---LHFANGVEL--SADESFVIVAET-----MSSRVHRYYLKGPKQGK 283 (337)
Q Consensus 216 ~-~~~-~~~~~~~G~v~~~d~~~~~~~~~~~~---~~~p~gia~--~~dg~~lyva~~-----~~~~I~~~~~~g~~~~~ 283 (337)
. ... ........+|..||.++++.....+- ...|..|++ +||++++||+.. .++.|++|+.+++....
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 0 000 00012345899999987764332222 246888877 999999999998 88999988887532111
Q ss_pred eeee-------ecCC----------CCCCCceeECCCCC-EEEEecCC
Q psy4771 284 SEVF-------IDGL----------PGLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 284 ~~~~-------~~~~----------~g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
..++ ...+ ++.|.+|.+++||+ |||+....
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 1111 0011 35689999999997 99999866
No 108
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.08 E-value=1.4e-08 Score=99.48 Aligned_cols=176 Identities=12% Similarity=0.007 Sum_probs=120.1
Q ss_pred eCCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCcEEEEEc--CCCeEEE
Q psy4771 71 HKGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFGLYKVNV--TTGQTEQ 146 (337)
Q Consensus 71 ~~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~gv~~vd~--~~g~~~~ 146 (337)
.++.+| +...++.|..||....+.+..+ .....|.+++++++| .||+++....|..+|. .+++...
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i----------~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVI----------DTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEE----------ECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEE----------ecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 356777 7778889999987433333222 111238899999999 7899886655999998 6665433
Q ss_pred EeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC----CCc-EEEEcCCCCccCceeee
Q psy4771 147 LISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS----DGM-VYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 147 l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~----~G~-lyvtd~~~~~~~~~~~~ 221 (337)
-.. ....|.++++++ ||+ +|+++..
T Consensus 217 ~i~----------------------------------------~g~~p~~va~sp~~~~dg~~l~v~~~~---------- 246 (543)
T 1nir_A 217 EIK----------------------------------------IGIEARSVESSKFKGYEDRYTIAGAYW---------- 246 (543)
T ss_dssp EEE----------------------------------------CCSEEEEEEECCSTTCTTTEEEEEEEE----------
T ss_pred EEe----------------------------------------cCCCcceEEeCCCcCCCCCEEEEEEcc----------
Confidence 221 123488999999 986 8877642
Q ss_pred eecCCccEEEEcCCCCeeEEEecc------------ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeec
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLIAN------------LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFID 289 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~~~------------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~ 289 (337)
.+.|..+|..+++....... -..+.+|+++++++.+|++....++|+.++.+..+......+ .
T Consensus 247 ----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~ 321 (543)
T 1nir_A 247 ----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-G 321 (543)
T ss_dssp ----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-E
T ss_pred ----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-c
Confidence 23677778777765433321 125678999999999999999999999999865322221122 2
Q ss_pred CCCCCCCceeECCCCC-EEEEecC
Q psy4771 290 GLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 290 ~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
....|.+++++++|+ +|++...
T Consensus 322 -~~~~~~~~~~spdg~~l~va~~~ 344 (543)
T 1nir_A 322 -AAPFLHDGGWDSSHRYFMTAANN 344 (543)
T ss_dssp -CCSSCCCEEECTTSCEEEEEEGG
T ss_pred -cCcCccCceECCCCCEEEEEecC
Confidence 234689999999998 6777653
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=3.9e-09 Score=99.95 Aligned_cols=202 Identities=12% Similarity=0.069 Sum_probs=115.5
Q ss_pred CccEEEe--eCCeEEEEe----------cCcEEEEEeCCceeEEEe--cCccccCccccCccCCcceEEECCCC-cEEEE
Q psy4771 64 GPEAVVK--HKGDLYMGV----------DGGHILKLSGGKLVPVVK--LGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVA 128 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~----------~~g~I~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVa 128 (337)
.| ++++ ++..+|+.. .++.|..+|..+.+.+.. ++... .......|.++++++|| +|||+
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~----r~~~g~~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP----RFLVGTYQWMNALTPDNKNLLFY 194 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC----CCCBSCCGGGSEECTTSSEEEEE
T ss_pred CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc----ccccCCCcceEEEcCCCCEEEEE
Confidence 68 9998 456799443 467799999854433322 22100 00123579999999999 89999
Q ss_pred ECC--CcEEEEEcCCCeEEEEeccccccCCCCCCCCCc----eeeCCCCCcc----ccc---------------------
Q psy4771 129 DAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNS----VTVDSDGQTG----QTE--------------------- 177 (337)
Q Consensus 129 d~~--~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~----v~~~~~g~~~----~~~--------------------- 177 (337)
+.. +.|..||.+++++..-+.. .+.....|.+ +++.++|+++ ..+
T Consensus 195 n~~~~~~VsVID~~t~kvv~~I~v----~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 195 QFSPAPAVGVVDLEGKTFDRMLDV----PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEEC----CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred ecCCCCeEEEEECCCCeEEEEEEc----CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 753 4599999998876543321 0000001111 4444555443 111
Q ss_pred ----------------ceeeeccccCC----CC-----------CCCCcc---EEEcCCC-cEEEEcCCCCccCceeeee
Q psy4771 178 ----------------QLISMDTEIDG----AK-----------PQIPNS---VTVDSDG-MVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 178 ----------------~v~~~~~~~~~----~~-----------~~~pn~---v~vd~~G-~lyvtd~~~~~~~~~~~~~ 222 (337)
.+..++..-.. .. ...|.+ ++++++| ++|+++..... + .-
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~--g---th 345 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE--W---KH 345 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT--T---CT
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc--c---cc
Confidence 12222210000 00 001222 5666654 36665431100 0 00
Q ss_pred ecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCC-EEEEEeCCCCEEEEEEeeCC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADES-FVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~-~lyva~~~~~~I~~~~~~g~ 279 (337)
....+.|.++|.+++++..-..-...|++|++++||+ .+|+++...+.|.+||....
T Consensus 346 k~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 346 KAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred cCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 0123579999999887654444445799999999999 99999999999999998643
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.07 E-value=2.5e-08 Score=93.44 Aligned_cols=179 Identities=17% Similarity=0.183 Sum_probs=123.3
Q ss_pred CccEEEe-e-CCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEEC--------C
Q psy4771 64 GPEAVVK-H-KGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADA--------Y 131 (337)
Q Consensus 64 ~P~~i~~-~-~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~--------~ 131 (337)
.|.++++ . +..+| ++..++.|..|+......+..+ .....|.+++++++| .|+++.. .
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~----------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT----------DKIGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC----------CCCSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe----------cCCCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 5777887 3 45677 6667899999987433333322 122458999999999 6677653 1
Q ss_pred CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcC
Q psy4771 132 FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 210 (337)
Q Consensus 132 ~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~ 210 (337)
..|..+|..+++....... ...+.+++++++|+ +|++..
T Consensus 283 g~i~~~d~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGP----------------------------------------PGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp EEEEEEETTTTEEEEEEEE----------------------------------------EECEEEEEECSSTTEEEEEET
T ss_pred CeEEEEECCCCcEEeeccC----------------------------------------CCCcceEEECCCCCEEEEEec
Confidence 2488889887765544321 12467899999985 888765
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCC--------------CEEEEEEe
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMS--------------SRVHRYYL 276 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~--------------~~I~~~~~ 276 (337)
. +|.|..+|.++++..........+.++++++||+.||++.... ++|+.+++
T Consensus 323 ~--------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 323 C--------------CSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp T--------------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred C--------------CCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 4 3588899988887665555667789999999999999998764 38999987
Q ss_pred eCCCCCceeeeecCCCCCCCceeECCCCC-EEEEe
Q psy4771 277 KGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 277 ~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
... ........ ...|.+++++++|+ ++++.
T Consensus 389 ~~~---~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 389 TTD---TVKEFWEA-GNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp TTT---EEEEEEEC-SSSEEEEEECTTSCEEEEEE
T ss_pred CCC---cEEEEecC-CCCCceEEEcCCCCEEEEEE
Confidence 532 22111221 24588999999997 45554
No 111
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.07 E-value=5e-08 Score=95.93 Aligned_cols=223 Identities=10% Similarity=0.010 Sum_probs=137.4
Q ss_pred CccEEEe--eCCeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEEC----CCC-cEEEEECC-Cc
Q psy4771 64 GPEAVVK--HKGDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFD----KNG-ALHVADAY-FG 133 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d----~~G-~lyVad~~-~g 133 (337)
.|+++++ ++..+|+...++.|..||.. +.+.+..+ .....|.+++++ ++| .+||++.. ..
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i----------~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI----------KIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE----------ECCSEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE----------ecCCCCceeEEccccCCCCCEEEEEEccCCe
Confidence 6889988 45578977788999999973 44433322 334569999999 588 78998755 34
Q ss_pred EEEEEcCCCeEEEEecccc-ccCCCC---CCCCCceeeCCCCCcc-----cccceeeeccccCC-------CCCCCCccE
Q psy4771 134 LYKVNVTTGQTEQLISMDT-EIDGAK---PQIPNSVTVDSDGQTG-----QTEQLISMDTEIDG-------AKPQIPNSV 197 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~-~~~g~~---~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~~~-------~~~~~pn~v 197 (337)
+..+|..+.+....+.... ..++.. ...+..++.++++... .++.|..++..-.. ....+++++
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~ 347 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDG 347 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCc
Confidence 8889988776655443111 111100 0012345566655443 23444444311000 023468899
Q ss_pred EEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc-ccce---eeEEE-ccCCCEEEEEe-CCCCE
Q psy4771 198 TVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN-LHFA---NGVEL-SADESFVIVAE-TMSSR 270 (337)
Q Consensus 198 ~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~-~~~p---~gia~-~~dg~~lyva~-~~~~~ 270 (337)
.++++|+ +|+++... +.|..+|.+++++.....- ...| .|+.+ +|+++.+|++. .+.+.
T Consensus 348 ~~~pdgr~~~va~~~s--------------n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~ 413 (567)
T 1qks_A 348 GLDGSHRYFITAANAR--------------NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDS 413 (567)
T ss_dssp EECTTSCEEEEEEGGG--------------TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSE
T ss_pred eECCCCCEEEEEeCCC--------------CeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCe
Confidence 9999997 77777543 3889999999876554433 3444 36664 68877898865 46689
Q ss_pred EEEEEeeCCCC----Cc-eeeeecCCCCCCCceeECCCCC-EEEEec
Q psy4771 271 VHRYYLKGPKQ----GK-SEVFIDGLPGLPDNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 271 I~~~~~~g~~~----~~-~~~~~~~~~g~Pdgi~~d~dG~-l~va~~ 311 (337)
|.+++.+..+. .+ ...+ ....+.+-.|+.+++|+ +||+..
T Consensus 414 Vsvid~~~~~~~~~~~kvv~~i-~~~g~g~~~i~~~p~~~~l~v~~~ 459 (567)
T 1qks_A 414 VALIGTDPEGHPDNAWKILDSF-PALGGGSLFIKTHPNSQYLYVDAT 459 (567)
T ss_dssp EEEEECCTTTCTTTBTSEEEEE-ECSCSCCCCEECCTTCSEEEEECT
T ss_pred EEEecCCCCCCccccCEEEEEE-ecCCCCCEEEEeCCCCCeEEEecC
Confidence 99999874221 11 1222 21222245688999995 999884
No 112
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.07 E-value=5.8e-08 Score=90.52 Aligned_cols=210 Identities=13% Similarity=0.094 Sum_probs=112.9
Q ss_pred cCccEEEe--eCCeEEEEe----------cCcEEEEEeCCceeEEEe--cCccccCccccCccCCcceEEECCCC-cEEE
Q psy4771 63 HGPEAVVK--HKGDLYMGV----------DGGHILKLSGGKLVPVVK--LGKDCYGFKYEQQCGRPLGIKFDKNG-ALHV 127 (337)
Q Consensus 63 ~~P~~i~~--~~g~ly~d~----------~~g~I~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyV 127 (337)
..| ++++ ++..+|+.. .++.|..+|..+.+.+.. ++.. . .......|.+++++++| .|||
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~--~--~~~~g~~p~~~~~spDG~~l~v 141 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA--P--RFDVGPYSWMNANTPNNADLLF 141 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc--c--ccccCCCccceEECCCCCEEEE
Confidence 368 8888 456799543 356788998754433322 2200 0 00112468999999999 8999
Q ss_pred EECC--CcEEEEEcCCCeEEEE-eccccccCCCCCCCCCceeeCCCCCcc-----cccceeeeccccCCCC---------
Q psy4771 128 ADAY--FGLYKVNVTTGQTEQL-ISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTEQLISMDTEIDGAK--------- 190 (337)
Q Consensus 128 ad~~--~gv~~vd~~~g~~~~l-~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~~~~~--------- 190 (337)
+... +.|..|| +++++... .. . |..+.+.++|+.. .++.+..++. .+..
T Consensus 142 ~n~~~~~~v~viD-~t~~~~~~~i~----~-------~~~~~~~~~~~~~~~~~~~dg~~~~vd~--~g~~~~~~~~~~~ 207 (373)
T 2mad_H 142 FQFAAGPAVGLVV-QGGSSDDQLLS----S-------PTCYHIHPGAPSTFYLLCAQGGLAKTDH--AGGAAGAGLVGAM 207 (373)
T ss_pred EecCCCCeEEEEE-CCCCEEeEEcC----C-------CceEEEEeCCCceEEEEcCCCCEEEEEC--CCcEEEEEecccc
Confidence 9743 4599999 98876544 32 1 2222222222211 1122222221 1100
Q ss_pred --CCCC--ccEEEcCC-CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe----------ccccceee---E
Q psy4771 191 --PQIP--NSVTVDSD-GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI----------ANLHFANG---V 252 (337)
Q Consensus 191 --~~~p--n~v~vd~~-G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~----------~~~~~p~g---i 252 (337)
...| ....+.++ +.+|+... .|.++.+|..++....+. .....|.| +
T Consensus 208 ~~~~~p~~~~~~~~~~~~~~~~~~~---------------~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 208 LTAAQNLLTQPAQANKSGRIVWPVY---------------SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred ccCCcceeecceeEecCCEEEEEcC---------------CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 0001 11222332 23343331 246777776544322111 01123555 8
Q ss_pred EEccCCCEEEEEeC---------CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC--EEEEe
Q psy4771 253 ELSADESFVIVAET---------MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN--FLVSL 310 (337)
Q Consensus 253 a~~~dg~~lyva~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~--l~va~ 310 (337)
++++|++++||+.. ..+.|++++.+..+. ... +. .++.|.++++++||+ +|++.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~-i~-~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQ-IS-LGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEE-EE-CCCCcCeEEECCCCCeEEEEEc
Confidence 99999999999864 246899999764321 112 22 445699999999998 55544
No 113
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=3.7e-09 Score=98.37 Aligned_cols=95 Identities=11% Similarity=0.069 Sum_probs=61.3
Q ss_pred EEEcCCCc-EEEEcC-C-CCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC-CCCEEE
Q psy4771 197 VTVDSDGM-VYWSDS-S-TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET-MSSRVH 272 (337)
Q Consensus 197 v~vd~~G~-lyvtd~-~-~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~-~~~~I~ 272 (337)
+++++||+ +||+.. . ... +.. .+.+..+|.++++...-......|+||++++||+++|++.. ..+.|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~-------~~~-~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSC-------LAA-AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCT-------TSC-EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcc-------ccc-CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 67777764 777643 1 100 000 12456899888765443333347999999999998999988 699999
Q ss_pred EEEeeCCCCCceeeeecCCCCCCCceeECCC
Q psy4771 273 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~d 303 (337)
++|+...+ ..--+. ....|++|+++.+
T Consensus 341 VID~~t~k---vv~~I~-vg~~P~~i~~~~~ 367 (368)
T 1mda_H 341 IYDAASDQ---DQSSVE-LDKGPESLSVQNE 367 (368)
T ss_dssp EEESSSCE---EEEECC-CCSCCCEEECCCC
T ss_pred EEECCCCc---EEEEEE-CCCCCCEEEeecC
Confidence 99976432 111122 3356999998764
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.06 E-value=2e-08 Score=93.08 Aligned_cols=221 Identities=13% Similarity=0.043 Sum_probs=124.6
Q ss_pred CCeEE-EEe-----cCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC----------CcE
Q psy4771 72 KGDLY-MGV-----DGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY----------FGL 134 (337)
Q Consensus 72 ~g~ly-~d~-----~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~----------~gv 134 (337)
...+| ++. .+++|++||..+.+.+..+ +....| +++++++| .|||++.. ..|
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i----------~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v 83 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMV----------PTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVV 83 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEE----------ECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEE
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEe----------cCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEE
Confidence 34677 442 3568999986333222222 222458 99999999 89999731 238
Q ss_pred EEEEcCCCeEEEEeccc-ccc-CCCCCCCCCceeeCCCCCcc-----c-ccceeeeccc--------cCCCC----CCCC
Q psy4771 135 YKVNVTTGQTEQLISMD-TEI-DGAKPQIPNSVTVDSDGQTG-----Q-TEQLISMDTE--------IDGAK----PQIP 194 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~-~~~-~g~~~~~P~~v~~~~~g~~~-----~-~~~v~~~~~~--------~~~~~----~~~p 194 (337)
..+|.++++...-.... ... .|. .|+++++++||+++ . .+.|..++.. +.... ...|
T Consensus 84 ~v~d~~t~~~~~~i~~~~~~~~~g~---~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p 160 (361)
T 2oiz_A 84 EVWDADKLTFEKEISLPPKRVQGLN---YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQP 160 (361)
T ss_dssp EEEETTTCCEEEEEEECTTBCCBCC---CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECT
T ss_pred EEEECcCCcEEEEEEcCccccccCC---CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcC
Confidence 89998877654333210 011 122 59999999999987 2 3456655422 11000 0123
Q ss_pred cc----EEEcCCCc-EEEEcCC-CC----------c------------cCceeeeeecCCccEEEEcCCCCeeEEEec--
Q psy4771 195 NS----VTVDSDGM-VYWSDSS-TK----------Y------------KSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-- 244 (337)
Q Consensus 195 n~----v~vd~~G~-lyvtd~~-~~----------~------------~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-- 244 (337)
.+ +++.++|. +|+.... .. + .++-........|.|+.+|..++.......
T Consensus 161 ~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~ 240 (361)
T 2oiz_A 161 NRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWS 240 (361)
T ss_dssp TSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEE
T ss_pred CCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccccc
Confidence 33 66667776 3333211 00 0 000001112234678888876544322210
Q ss_pred --------cccceee---EEEccCCCEEEEEeC----------CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCC
Q psy4771 245 --------NLHFANG---VELSADESFVIVAET----------MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 245 --------~~~~p~g---ia~~~dg~~lyva~~----------~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~d 303 (337)
....|.| +++++|++++||+.. ..++|++++.+..+. ...+ . ... |.+|++++|
T Consensus 241 ~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i-~-~~~-p~~ia~spd 315 (361)
T 2oiz_A 241 LLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARI-P-GRD-ALSMTIDQQ 315 (361)
T ss_dssp SCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEE-E-CTT-CCEEEEETT
T ss_pred ccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEE-e-cCC-eeEEEECCC
Confidence 0113555 999999999999864 245899999754311 1111 2 335 999999999
Q ss_pred CC-EEEEec
Q psy4771 304 GN-FLVSLV 311 (337)
Q Consensus 304 G~-l~va~~ 311 (337)
|+ +|++..
T Consensus 316 g~~l~v~n~ 324 (361)
T 2oiz_A 316 RNLMLTLDG 324 (361)
T ss_dssp TTEEEEECS
T ss_pred CCEEEEeCC
Confidence 97 777775
No 115
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.04 E-value=1.3e-08 Score=91.62 Aligned_cols=156 Identities=12% Similarity=0.113 Sum_probs=101.4
Q ss_pred eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccC-CcceEEECCCC-cEEEEECCC-cEEEEEcCCCeEEEEecc
Q psy4771 74 DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCG-RPLGIKFDKNG-ALHVADAYF-GLYKVNVTTGQTEQLISM 150 (337)
Q Consensus 74 ~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~P~Gl~~d~~G-~lyVad~~~-gv~~vd~~~g~~~~l~~~ 150 (337)
.+++...+++|..|+..+.+.+..+.. .... .|.+++++++| .+|++.... .|..+|..+++.......
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITI--------ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEEC--------TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEc--------CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 455778889999998743322222210 1111 58999999999 688988654 499999988776543321
Q ss_pred ccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCc-cCceeeeeecCCcc
Q psy4771 151 DTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKY-KSGLFEGLTSGSGR 228 (337)
Q Consensus 151 ~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~-~~~~~~~~~~~~G~ 228 (337)
...+. ....|.+++++++|+ +|+++..... +++ .....+.
T Consensus 75 --~~~~~--------------------------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~----~~~~~~~ 116 (337)
T 1pby_B 75 --STPEE--------------------------------RVKSLFGAALSPDGKTLAIYESPVRLELTH----FEVQPTR 116 (337)
T ss_dssp --CBTTE--------------------------------EEECTTCEEECTTSSEEEEEEEEEEECSSC----EEECCCE
T ss_pred --CCccc--------------------------------ccccccceEECCCCCEEEEEeccccccccc----ccccCce
Confidence 00000 012478999999995 8888632100 000 0003468
Q ss_pred EEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 229 LIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 229 v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
|+.+|.++++..........|+++++++||++||++ .+.|.++++++
T Consensus 117 i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~ 163 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEA 163 (337)
T ss_dssp EEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTT
T ss_pred EEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCC
Confidence 999999888765555445678999999999999999 36799998754
No 116
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.04 E-value=1.8e-08 Score=93.05 Aligned_cols=185 Identities=12% Similarity=0.135 Sum_probs=111.0
Q ss_pred cCccEEEe-e--CC--eEE-EEecCc----EEEEEeCC-cee-EEEecCccccCccccCccCCcceEEECCCCcEEEEEC
Q psy4771 63 HGPEAVVK-H--KG--DLY-MGVDGG----HILKLSGG-KLV-PVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADA 130 (337)
Q Consensus 63 ~~P~~i~~-~--~g--~ly-~d~~~g----~I~~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~ 130 (337)
+.|.+|.+ . ++ .|| ++...+ .|++++.+ +.. .+..+. .....+|+.++++++|++||++.
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~--------g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR--------HKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC--------CTTCSSEEEEEEEETTEEEEEES
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc--------cCCCCCCceEEEeCCCCEEecCC
Confidence 58999998 4 35 477 555522 47778773 322 222221 14567899999999999999975
Q ss_pred C-----------------C-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 131 Y-----------------F-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 131 ~-----------------~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
. . +|+++|+. +++.+.. .+.
T Consensus 184 ~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~----------------------------------------~l~ 221 (355)
T 3sre_A 184 HYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE----------------------------------------GFD 221 (355)
T ss_dssp CSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE----------------------------------------EES
T ss_pred cEeCCcccccchhhccCCccEEEEEECC--eEEEeec----------------------------------------CCc
Confidence 1 1 27777763 4444432 356
Q ss_pred CCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCC-CCeeE--EEeccccceeeEEEcc-CCCEEEEEeC-
Q psy4771 193 IPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TKKNK--VLIANLHFANGVELSA-DESFVIVAET- 266 (337)
Q Consensus 193 ~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~~~~--~~~~~~~~p~gia~~~-dg~~lyva~~- 266 (337)
.||||++++||+ +||+|+... +|++|+.+ +++.. ....-...|.|+++++ +|+ ||++..
T Consensus 222 ~pNGia~spDg~~lYvadt~~~--------------~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~-lwva~~~ 286 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAH--------------KIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGD-LWVGCHP 286 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGT--------------EEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCC-EEEEEES
T ss_pred ccCcceECCCCCEEEEEeCCCC--------------eEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCc-EEEEecC
Confidence 799999999995 999998643 67666643 23322 1223346799999999 585 999653
Q ss_pred CCC-------------EEEEEEeeCCCCCc-eeeeecCCCCC-CCceeECCCCCEEEEecC
Q psy4771 267 MSS-------------RVHRYYLKGPKQGK-SEVFIDGLPGL-PDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 267 ~~~-------------~I~~~~~~g~~~~~-~~~~~~~~~g~-Pdgi~~d~dG~l~va~~~ 312 (337)
+.. .|.|+....+.... .+++.+...-+ -...++-.+|+||++...
T Consensus 287 ~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGsv~ 347 (355)
T 3sre_A 287 NGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGTVF 347 (355)
T ss_dssp CHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEESS
T ss_pred CceEEEEECCCCCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEEcC
Confidence 322 45555531111122 34444411001 122334456889998753
No 117
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.02 E-value=6.9e-09 Score=93.99 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=99.7
Q ss_pred ceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCC
Q psy4771 115 LGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQI 193 (337)
Q Consensus 115 ~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~ 193 (337)
.|+++.+++++|++....+ |..+|.++++....... . ....
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~----~----------------------------------~~~~ 44 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM----P----------------------------------DKFG 44 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC----S----------------------------------SCCS
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec----C----------------------------------CCCC
Confidence 4778888889999976654 99999988876544321 0 1124
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc-------ccceeeEEEccCCCEEEEEe
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN-------LHFANGVELSADESFVIVAE 265 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~-------~~~p~gia~~~dg~~lyva~ 265 (337)
|.+++++++|+ +|++... .+.|+.+|.++++....... ...|++++++|||+.||++.
T Consensus 45 ~~~~~~s~dg~~~~v~~~~--------------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNH--------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp SCEEEECTTSSEEEEEETT--------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred CceeEECCCCCEEEEEeCC--------------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 78999999996 8888743 34899999988876443322 23489999999999999998
Q ss_pred CC-----------CCEEEEEEeeCCCCCc-eeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 266 TM-----------SSRVHRYYLKGPKQGK-SEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 266 ~~-----------~~~I~~~~~~g~~~~~-~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
.. .++|.+++++..+... ...+. .+..+.+++++++|++|++.
T Consensus 111 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 111 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp EEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSCEEEES
T ss_pred ccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCcEEEcc
Confidence 54 5799999986532222 12222 23347888899999988854
No 118
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.95 E-value=7.1e-08 Score=98.29 Aligned_cols=215 Identities=18% Similarity=0.179 Sum_probs=137.9
Q ss_pred EEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEE
Q psy4771 67 AVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTE 145 (337)
Q Consensus 67 ~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~ 145 (337)
+++. .+|.||++..++.|.+++..+.. +..+.... ........+|+.|++|+||++....|++++++++++.+
T Consensus 367 ~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~-----~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 367 SVCDDGQGKLWIGTDGGGINVFENGKRV-AIYNKENR-----ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp EEEECTTSCEEEEEBSSCEEEEETTEEE-EECC----------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE
T ss_pred EEEEcCCCCEEEEeCCCcEEEEECCCCe-EEEccCCC-----CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE
Confidence 4444 46899988866669999885432 21111100 01124467899999999999975578999999888877
Q ss_pred EEeccccccCCCCCCCCCceeeCCCCCcc--cccceeeeccccCC-----------CCCCCCccEEEcCCCcEEEEcCCC
Q psy4771 146 QLISMDTEIDGAKPQIPNSVTVDSDGQTG--QTEQLISMDTEIDG-----------AKPQIPNSVTVDSDGMVYWSDSST 212 (337)
Q Consensus 146 ~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~~~~v~~~~~~~~~-----------~~~~~pn~v~vd~~G~lyvtd~~~ 212 (337)
.+... .... .....+..|++|++. +.+++..++..... .....+++++.|++|+||++...
T Consensus 441 ~~~~~--~~~~---~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~- 514 (781)
T 3v9f_A 441 IIELE--KNEL---LDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG- 514 (781)
T ss_dssp ECCST--TTCC---CCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-
T ss_pred EeccC--CCCC---CeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-
Confidence 66421 0111 123457788888876 44666666522110 01245678999999999988753
Q ss_pred CccCceeeeeecCCccEEEEcCCCCeeEEEec--cc--cceeeEEEccCCCEEEEEeCCCCEE-EEEEeeCCCCCceeee
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA--NL--HFANGVELSADESFVIVAETMSSRV-HRYYLKGPKQGKSEVF 287 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~--~~--~~p~gia~~~dg~~lyva~~~~~~I-~~~~~~g~~~~~~~~~ 287 (337)
+.|+++|+++++.+.... ++ ...+.|+.+++|+ ||++.. +.+ .+|+.+..+ ...+
T Consensus 515 --------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~--~Glv~~~d~~~~~---~~~~ 574 (781)
T 3v9f_A 515 --------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MWLATG--EGLVCFPSARNFD---YQVF 574 (781)
T ss_dssp --------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EEEEET--TEEEEESCTTTCC---CEEE
T ss_pred --------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EEEEEC--CCceEEECCCCCc---EEEc
Confidence 268899988877665432 22 2346788888884 999875 456 888765432 2233
Q ss_pred e--cCCCC-CCCceeECCCCCEEEEecCC
Q psy4771 288 I--DGLPG-LPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 288 ~--~~~~g-~Pdgi~~d~dG~l~va~~~~ 313 (337)
. ++++. ...+++.|++|++|++...+
T Consensus 575 ~~~~gl~~~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 575 QRKEGLPNTHIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp CGGGTCSCCCCCEEEECSSSCEEEECSSC
T ss_pred cccCCCCCceEEEEEECCCCCEEEEcCCc
Confidence 2 23332 34579999999999998766
No 119
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.95 E-value=1.2e-07 Score=96.72 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=137.6
Q ss_pred EEEe-eCCe-EEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCC
Q psy4771 67 AVVK-HKGD-LYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTG 142 (337)
Q Consensus 67 ~i~~-~~g~-ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g 142 (337)
+++. .++. ||++..++.|++++.. +...+. ... . .........++.|++|+||++.. .|++++|++++
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~---~~~-~---~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN---QRN-S---QLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR 481 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC---TTT-S---CCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee---cCC-C---CcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC
Confidence 4454 4677 9988887779999873 333321 100 0 01123567899999999999975 78999999988
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcc--cccceeeecccc-----C------CCCCCCCccEEEcCCCcEEEEc
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG--QTEQLISMDTEI-----D------GAKPQIPNSVTVDSDGMVYWSD 209 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~~~~v~~~~~~~-----~------~~~~~~pn~v~vd~~G~lyvtd 209 (337)
+.+.+.... ...+........+..|++|++. +.+++..++... . +.+....+++..|++|+||++.
T Consensus 482 ~~~~~~~~~-~~~~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 482 SFTTIEKEK-DGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EEEECCBCT-TCCBCCCCCEEEEEECTTCCEEEEESSCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred eEEEccccc-cccccCCceEEEEEECCCCCEEEEeCCceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 877664310 0001000122457789999886 336666655311 0 0112345678899999999877
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEec--ccc--ceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCcee
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA--NLH--FANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSE 285 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~--~~~--~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~ 285 (337)
.. .|+++|+++++.+.... ++. ...+|+.+++| .||++. .+.|.+|+++.. ...
T Consensus 561 ~~----------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g-~lWi~t--~~Gl~~~~~~~~---~~~ 618 (795)
T 4a2l_A 561 RE----------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFG-RLWLST--NRGISCFNPETE---KFR 618 (795)
T ss_dssp SS----------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTS-CEEEEE--TTEEEEEETTTT---EEE
T ss_pred CC----------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCC-CEEEEc--CCceEEEcCCCC---cEE
Confidence 53 68889988877655432 222 34678888888 499987 468999987532 233
Q ss_pred eee--cCCCCC---CCceeECCCCCEEEEecCC
Q psy4771 286 VFI--DGLPGL---PDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 286 ~~~--~~~~g~---Pdgi~~d~dG~l~va~~~~ 313 (337)
.+. ++++.. ...+..+++|++|++...+
T Consensus 619 ~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 619 NFTESDGLQSNQFNTASYCRTSVGQMYFGGING 651 (795)
T ss_dssp EECGGGTCSCSCEEEEEEEECTTSCEEEEETTE
T ss_pred EcCCcCCCccccCccCceeECCCCeEEEecCCc
Confidence 332 233321 2467889999999999877
No 120
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.94 E-value=1.6e-07 Score=83.80 Aligned_cols=174 Identities=11% Similarity=0.059 Sum_probs=115.6
Q ss_pred CccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-Cc-EEEEEcC
Q psy4771 64 GPEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FG-LYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~g-v~~vd~~ 140 (337)
.+.++++ .+|.+|+ ..+++|+.+++ +.+.+.++.. +......+..+.++|+++|++.. .+ ++.+|++
T Consensus 38 ~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~--------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~ 107 (276)
T 3no2_A 38 ECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAA--------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMK 107 (276)
T ss_dssp CCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEEC--------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT
T ss_pred CCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcC--------CCCccccccEECCCCCEEEEecCCCCEEEEEeCC
Confidence 5777877 6788887 45778999998 2222322211 11123567889999999999875 44 8889987
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCCC------CCCCCccEEEcCCCcEEEEcC
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDGA------KPQIPNSVTVDSDGMVYWSDS 210 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~~------~~~~pn~v~vd~~G~lyvtd~ 210 (337)
+..+..+... ....+ ....|..++++++|+++ ..+.|..++.+ +. ....|.++.+.++|++++++.
T Consensus 108 Gk~l~~~~~~-~~~~~-~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--G~~~w~~~~~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 108 GEVLSKTEFE-TGIER-PHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLSGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp SCEEEEEEEC-CSCSS-GGGSCSCCEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECSSCCCEEEECTTSCEEEECB
T ss_pred CCEEEEEecc-CCCCc-ccccccCceECCCCCEEEEecCCCEEEEECCC--CCEEEEEECCCCccceeEcCCCCEEEEeC
Confidence 6655554321 11111 11246778899999998 33566666643 32 124688899999999998876
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEec-------cccceeeEEEccCCCEEEEEeC
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-------NLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-------~~~~p~gia~~~dg~~lyva~~ 266 (337)
.. ++|+.+|+++|+...-.. .+..|.++++.++|+ +||+++
T Consensus 184 ~~--------------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~~ 231 (276)
T 3no2_A 184 DA--------------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG-LYICNW 231 (276)
T ss_dssp TT--------------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC-EEEEEE
T ss_pred CC--------------CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC-EEEEec
Confidence 52 478999998776533221 255699999999995 889885
No 121
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.94 E-value=9.9e-08 Score=84.02 Aligned_cols=164 Identities=10% Similarity=0.087 Sum_probs=99.6
Q ss_pred CcccCccEEEe-eCCeEE-EEecCcEEEEEeC---CceeEEE--ecCccccCccccCccCCcceEEECCCC-cEEEEECC
Q psy4771 60 NEIHGPEAVVK-HKGDLY-MGVDGGHILKLSG---GKLVPVV--KLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY 131 (337)
Q Consensus 60 g~~~~P~~i~~-~~g~ly-~d~~~g~I~~~~~---~~~~~~~--~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~ 131 (337)
+....+|+|++ .++.+| ++..+++++.++- +....+. .++.. ....-....||++|+++ +||++...
T Consensus 67 ~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~-----~~~~N~g~EGLA~d~~~~~L~va~E~ 141 (255)
T 3qqz_A 67 DFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQ-----ESPTNCGFEGLAYSRQDHTFWFFKEK 141 (255)
T ss_dssp SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCS-----SCCCSSCCEEEEEETTTTEEEEEEES
T ss_pred CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccc-----cccccCCcceEEEeCCCCEEEEEECc
Confidence 44568999999 677777 7778889988753 2211111 11100 00112235899999987 89998643
Q ss_pred -C-cEEEEEc--CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEE
Q psy4771 132 -F-GLYKVNV--TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVY 206 (337)
Q Consensus 132 -~-gv~~vd~--~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~ly 206 (337)
. .|+.++- .+..++.+... ...+ .....-+.++++|+ .|++|
T Consensus 142 ~p~~i~~~~g~~~~~~l~i~~~~--~~~~-------------------------------~~~~~d~S~l~~dp~tg~ll 188 (255)
T 3qqz_A 142 NPIEVYKVNGLLSSNELHISKDK--ALQR-------------------------------QFTLDDVSGAEFNQQKNTLL 188 (255)
T ss_dssp SSEEEEEEESTTCSSCCEEEECH--HHHH-------------------------------TCCSSCCCEEEEETTTTEEE
T ss_pred CCceEEEEcccccCCceeeecch--hhcc-------------------------------ccccCCceeEEEcCCCCeEE
Confidence 2 4788871 11112222110 0000 01244579999999 47799
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE--ecc-------ccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL--IAN-------LHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~--~~~-------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+....++ .|+.+|.++.....+ ..+ +..|.|||++++|+ |||+.. .|.+++|..+
T Consensus 189 iLS~~s~--------------~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE-~n~~y~f~~~ 252 (255)
T 3qqz_A 189 VLSHESR--------------ALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSE-PNRFYRFTPQ 252 (255)
T ss_dssp EEETTTT--------------EEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEET-TTEEEEEEC-
T ss_pred EEECCCC--------------eEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcC-CceEEEEEec
Confidence 8776543 777777764422221 112 46899999999995 998854 4799999854
No 122
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.94 E-value=2.1e-08 Score=97.70 Aligned_cols=210 Identities=13% Similarity=0.081 Sum_probs=130.6
Q ss_pred cCccEEEe----eCCeEEEE------------------ecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEEC
Q psy4771 63 HGPEAVVK----HKGDLYMG------------------VDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFD 120 (337)
Q Consensus 63 ~~P~~i~~----~~g~ly~d------------------~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d 120 (337)
.+|+++++ +++.+|+. ..++.+..+|..+.+....+ ...+.|.+++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI----------~Vgg~pd~~~~s 203 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQV----------LVSGNLDNCDAD 203 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEE----------EESSCCCCEEEC
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEE----------EeCCCccceEEC
Confidence 47999996 36778865 33456777777543333222 333579999999
Q ss_pred CCC-cEEEEECCC--------------------------------------cEEEEEcCC--CeE-EEEeccccccCCCC
Q psy4771 121 KNG-ALHVADAYF--------------------------------------GLYKVNVTT--GQT-EQLISMDTEIDGAK 158 (337)
Q Consensus 121 ~~G-~lyVad~~~--------------------------------------gv~~vd~~~--g~~-~~l~~~~~~~~g~~ 158 (337)
++| .+|++.... +|..||..+ +++ ...+. .|+
T Consensus 204 pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-----vg~- 277 (595)
T 1fwx_A 204 YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-----IAN- 277 (595)
T ss_dssp SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-----EES-
T ss_pred CCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-----cCC-
Confidence 998 778886321 355666654 322 22221 122
Q ss_pred CCCCCceeeCCCCCcc-----cccceeeecccc-----------------CCCCCCCCccEEEcCCCcEEEEcCCCCccC
Q psy4771 159 PQIPNSVTVDSDGQTG-----QTEQLISMDTEI-----------------DGAKPQIPNSVTVDSDGMVYWSDSSTKYKS 216 (337)
Q Consensus 159 ~~~P~~v~~~~~g~~~-----~~~~v~~~~~~~-----------------~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~ 216 (337)
.|+++.+++||+++ ..+.|..++... +-.....|.+++++++|++|++..-..
T Consensus 278 --~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~lds--- 352 (595)
T 1fwx_A 278 --NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDS--- 352 (595)
T ss_dssp --SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTT---
T ss_pred --CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCC---
Confidence 49999999999987 445565555321 111346799999999999998886532
Q ss_pred ceeeeeecCCccEEEEcCCC----------Cee-EEEecc-----ccceeeEEEccCCCEEEEEeCCC-CEE--------
Q psy4771 217 GLFEGLTSGSGRLIQYNPKT----------KKN-KVLIAN-----LHFANGVELSADESFVIVAETMS-SRV-------- 271 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~----------~~~-~~~~~~-----~~~p~gia~~~dg~~lyva~~~~-~~I-------- 271 (337)
.|.++|.++ .++ ..+.-+ ...+.|+++++||++||+++..+ .|+
T Consensus 353 -----------qV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~ 421 (595)
T 1fwx_A 353 -----------QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKP 421 (595)
T ss_dssp -----------EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCC
T ss_pred -----------cEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCC
Confidence 444444332 111 111111 23346888999999999999887 777
Q ss_pred ---EEEEeeCCCCCceeeeecCCCCCCCceeECCCCCE
Q psy4771 272 ---HRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNF 306 (337)
Q Consensus 272 ---~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l 306 (337)
..|+++|.++.-..-... .+.|-.+.++++..+
T Consensus 422 ~~~ql~dis~~~m~lv~d~p~--~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 422 ENDQLIDISGDKMVLVHDGPT--FAEPHDAIAVHPSIL 457 (595)
T ss_dssp EEEEEEECSSSSCEEEEEEEE--SSCCCCEEEECTTTT
T ss_pred CcceEEEcCCCcEEEEEEEcC--CCCCCceEEccHHHc
Confidence 889987654432211111 245888888887755
No 123
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.93 E-value=1.4e-07 Score=96.35 Aligned_cols=217 Identities=14% Similarity=0.187 Sum_probs=134.5
Q ss_pred EEEe-eCCeEEEEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCcEEEEEcCCC
Q psy4771 67 AVVK-HKGDLYMGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFGLYKVNVTTG 142 (337)
Q Consensus 67 ~i~~-~~g~ly~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~~g 142 (337)
++.. .+|.||++..++-|.+++..+ ...+. ..... . ...-......+++.|++|+ |||+....||.++|++++
T Consensus 361 ~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~-~~~~~-~-~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 361 CIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYT-LQEDE-S-ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEECTTSCEEEEESSSCEEEECTTTCCEEEEC-CC--------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred EEEECCCCCEEEEECCCCeEEEcCCCCcEEEEe-cCCCC-c-ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 4444 578999888886799998743 32221 00000 0 0000123466899999999 999976688999999988
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcc--cccceeeecccc------C------CCCCCCCccEEEcCCCcEEEE
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG--QTEQLISMDTEI------D------GAKPQIPNSVTVDSDGMVYWS 208 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~~~~v~~~~~~~------~------~~~~~~pn~v~vd~~G~lyvt 208 (337)
+.+.+......... .....+..|++|++. +.+++..++... . ........++..|++|++|++
T Consensus 438 ~~~~~~~~~~~l~~---~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 438 QVENFNQRNSQLVN---ENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp CEEEECTTTSCCSC---SCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred cEEEeecCCCCcCC---CeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEE
Confidence 88776531100111 123457788888876 335666655211 0 111234578889999999988
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-----ccc--cceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCC
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-----ANL--HFANGVELSADESFVIVAETMSSRVHRYYLKGPKQ 281 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-----~~~--~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~ 281 (337)
... .|+++|+++++. ... .++ ...++|+.+++|+ ||++... .|.+|+.+..
T Consensus 515 t~~----------------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~--Gl~~~d~~~~-- 572 (795)
T 4a2l_A 515 GEE----------------GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGI-IWVGTRE--GFYCFNEKDK-- 572 (795)
T ss_dssp ESS----------------CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSC-EEEEESS--CEEEEETTTT--
T ss_pred eCC----------------ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeCC--CceeECCCCC--
Confidence 752 677777766655 221 112 2456788888885 9988754 7899986532
Q ss_pred CceeeeecCCCCCCC----ceeECCCCCEEEEecCC
Q psy4771 282 GKSEVFIDGLPGLPD----NVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 282 ~~~~~~~~~~~g~Pd----gi~~d~dG~l~va~~~~ 313 (337)
..+.+.. ..|+|+ +|..|++|++|++...+
T Consensus 573 -~~~~~~~-~~gl~~~~i~~i~~d~~g~lWi~t~~G 606 (795)
T 4a2l_A 573 -QIKRYNT-TNGLPNNVVYGILEDSFGRLWLSTNRG 606 (795)
T ss_dssp -EEEEECG-GGTCSCSCEEEEEECTTSCEEEEETTE
T ss_pred -cEEEeCC-CCCCchhheEEEEECCCCCEEEEcCCc
Confidence 2333322 223444 48899999999999655
No 124
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.87 E-value=9e-08 Score=89.27 Aligned_cols=145 Identities=13% Similarity=0.017 Sum_probs=96.3
Q ss_pred eCCeEE-EEec----CcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC----------CcE
Q psy4771 71 HKGDLY-MGVD----GGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY----------FGL 134 (337)
Q Consensus 71 ~~g~ly-~d~~----~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~----------~gv 134 (337)
++..+| ++.. +++|+++|..+.+.+..+ +....|. ++++++| .+||++.+ +.|
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I----------~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI----------DGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE----------EECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE----------ECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 367899 6665 789999998554444322 2335585 9999999 89999742 238
Q ss_pred EEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCC
Q psy4771 135 YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTK 213 (337)
Q Consensus 135 ~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~ 213 (337)
..+|.+++++..-+.. ..|+. ......|.++++++||+ +|+++..
T Consensus 112 sviD~~t~~v~~~I~v---~~g~r-----------------------------~~~g~~P~~~a~spDGk~lyVan~~-- 157 (386)
T 3sjl_D 112 EVFDPVTLLPTADIEL---PDAPR-----------------------------FLVGTYPWMTSLTPDGKTLLFYQFS-- 157 (386)
T ss_dssp EEECTTTCCEEEEEEE---TTCCC-----------------------------CCBSCCGGGEEECTTSSEEEEEECS--
T ss_pred EEEECCCCeEEEEEEC---CCccc-----------------------------cccCCCCceEEEcCCCCEEEEEEcC--
Confidence 8999988876544321 01110 00134799999999997 9998753
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEec----cccceee----EEEccCCCEEEEEeCCCCEE
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA----NLHFANG----VELSADESFVIVAETMSSRV 271 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~----~~~~p~g----ia~~~dg~~lyva~~~~~~I 271 (337)
..+.|..+|.+++++..-.. ...+|.| +++++||+.+||+....+++
T Consensus 158 -----------~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 158 -----------PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp -----------SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred -----------CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 12478899998887643322 1235666 48889998888877655665
No 125
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=3.1e-07 Score=93.54 Aligned_cols=183 Identities=10% Similarity=0.120 Sum_probs=121.4
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCC
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g 142 (337)
.++.. .++.||++..+ .|+++++. +...+.... .. ........+|+.|++|+|||+....||+++|++++
T Consensus 453 ~~i~~d~~g~lwigt~~-Gl~~~~~~~~~~~~~~~~~-~~-----~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 453 RVFYEDKNKKIWIGTHA-GVFVIDLASKKVIHHYDTS-NS-----QLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEECTTSEEEEEETT-EEEEEESSSSSCCEEECTT-TS-----SCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred EEEEECCCCCEEEEECC-ceEEEeCCCCeEEecccCc-cc-----ccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 34444 47899977774 49999873 333332111 00 01124577999999999999986688999999888
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
+++.+.. ..+. +-...+++..|++|+||++...
T Consensus 526 ~~~~~~~----~~~l--------------------------------~~~~i~~i~~d~~g~lWi~T~~----------- 558 (781)
T 3v9f_A 526 LVRKFNQ----YEGF--------------------------------CSNTINQIYRSSKGQMWLATGE----------- 558 (781)
T ss_dssp EEEEECT----TTTC--------------------------------SCSCEEEEEECTTSCEEEEETT-----------
T ss_pred eEEEccC----CCCC--------------------------------CCCeeEEEEECCCCCEEEEECC-----------
Confidence 7776642 1111 2345678999999999998753
Q ss_pred ecCCccE-EEEcCCCCeeEEEe--cccc--ceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee--cCCCCC-
Q psy4771 223 TSGSGRL-IQYNPKTKKNKVLI--ANLH--FANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI--DGLPGL- 294 (337)
Q Consensus 223 ~~~~G~v-~~~d~~~~~~~~~~--~~~~--~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~--~~~~g~- 294 (337)
.+ +++|+++++.+... +++. ...+++.+++| .||++. .+.|.+|+++.. ....+. ++++..
T Consensus 559 -----Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g-~lW~~t--~~Gl~~~~~~~~---~~~~~~~~dGl~~~~ 627 (781)
T 3v9f_A 559 -----GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNG-NIWAST--NTGISCYITSKK---CFYTYDHSNNIPQGS 627 (781)
T ss_dssp -----EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSS-CEEEEC--SSCEEEEETTTT---EEEEECGGGTCCSSC
T ss_pred -----CceEEECCCCCcEEEccccCCCCCceEEEEEECCCC-CEEEEc--CCceEEEECCCC---ceEEecccCCccccc
Confidence 45 88888877765543 2222 34688888888 499986 456999987532 233332 233321
Q ss_pred --CCceeECCCCCEEEEecCC
Q psy4771 295 --PDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 295 --Pdgi~~d~dG~l~va~~~~ 313 (337)
+..+..+++|++|++...+
T Consensus 628 f~~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 628 FISGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp EEEEEEEECTTSCEEEEETTE
T ss_pred cccCceEECCCCEEEEECCCc
Confidence 2357889999999999877
No 126
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.84 E-value=1.5e-07 Score=92.51 Aligned_cols=176 Identities=11% Similarity=0.000 Sum_probs=117.5
Q ss_pred CCeEE-EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCcEEEEEcC--CCeEEEE
Q psy4771 72 KGDLY-MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFGLYKVNVT--TGQTEQL 147 (337)
Q Consensus 72 ~g~ly-~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~gv~~vd~~--~g~~~~l 147 (337)
++.+| +...+++|..+|..+.+.+..+ .....|++++++++| .+||+.....|..||.. ++++..-
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i----------~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVL----------DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEE----------ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEE----------eCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 45777 7777899999998543333222 223468999999999 68998754569999985 5543322
Q ss_pred eccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEc----CCCc-EEEEcCCCCccCceeeee
Q psy4771 148 ISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVD----SDGM-VYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 148 ~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd----~~G~-lyvtd~~~~~~~~~~~~~ 222 (337)
+. ....|.+++++ +||+ +|+++..
T Consensus 236 i~----------------------------------------~G~~P~~ia~s~~~~pDGk~l~v~n~~----------- 264 (567)
T 1qks_A 236 IK----------------------------------------IGSEARSIETSKMEGWEDKYAIAGAYW----------- 264 (567)
T ss_dssp EE----------------------------------------CCSEEEEEEECCSTTCTTTEEEEEEEE-----------
T ss_pred Ee----------------------------------------cCCCCceeEEccccCCCCCEEEEEEcc-----------
Confidence 21 12348899999 5886 8888753
Q ss_pred ecCCccEEEEcCCCCeeEEEec--c----------ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIA--N----------LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDG 290 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~--~----------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~ 290 (337)
.+.|..+|..+.+...... + .....+|..++++..++++....++|+.++......-.... ++
T Consensus 265 ---~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~-i~- 339 (567)
T 1qks_A 265 ---PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE-IS- 339 (567)
T ss_dssp ---TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-EE-
T ss_pred ---CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee-ee-
Confidence 3477788877766533221 1 11346888899988899999889999999975432111111 11
Q ss_pred CCCCCCceeECCCCC-EEEEecCC
Q psy4771 291 LPGLPDNVKRDSKGN-FLVSLVCP 313 (337)
Q Consensus 291 ~~g~Pdgi~~d~dG~-l~va~~~~ 313 (337)
...+|.++.+|++|+ +||+....
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~s 363 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANAR 363 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGG
T ss_pred ccccccCceECCCCCEEEEEeCCC
Confidence 223578899999998 77877544
No 127
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.82 E-value=2.2e-07 Score=86.17 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=120.8
Q ss_pred CccEEEe--eCCeEEEEecCc------EEEEEeCCc-------eeEE-EecCc--cccCccccCccCCcceEEECCCCcE
Q psy4771 64 GPEAVVK--HKGDLYMGVDGG------HILKLSGGK-------LVPV-VKLGK--DCYGFKYEQQCGRPLGIKFDKNGAL 125 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~~~g------~I~~~~~~~-------~~~~-~~~g~--~~~~~~~~~~~~~P~Gl~~d~~G~l 125 (337)
-|.++++ .++.+|+....- .+-.++.++ ...+ ..+.. .| ..+....++.+|+.|+|
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~------~~lvsV~~v~iD~~~rL 100 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTG------KELTSIYQPVIDDCRRL 100 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSS------CSSSCEEEEEECTTCEE
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccc------cceEEeeEEEEcCCCcE
Confidence 5888888 688899776532 233332210 0011 12221 22 34567889999999999
Q ss_pred EEEECC-------------C---cEEEEEcCCC--eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 126 HVADAY-------------F---GLYKVNVTTG--QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 126 yVad~~-------------~---gv~~vd~~~g--~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
||.|++ . .|+.+|..++ ++...... |..++.
T Consensus 101 WVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~-----------p~~~~~-------------------- 149 (381)
T 3q6k_A 101 WVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYF-----------PTRLVE-------------------- 149 (381)
T ss_dssp EEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEEC-----------CGGGCC--------------------
T ss_pred EEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEEC-----------CHHhcc--------------------
Confidence 999975 1 2788898887 65544431 222111
Q ss_pred CCCCCCCccEEEc-C-------CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe--------------cc
Q psy4771 188 GAKPQIPNSVTVD-S-------DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--------------AN 245 (337)
Q Consensus 188 ~~~~~~pn~v~vd-~-------~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--------------~~ 245 (337)
+-...++++|| . ++.+|+||.... .|.+||.++++..++. .+
T Consensus 150 --~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~--------------gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G 213 (381)
T 3q6k_A 150 --KPTYFGGFAVDVANPKGDCSETFVYITNFLRG--------------ALFIYDHKKQDSWNVTHPTFKAERPTKFDYGG 213 (381)
T ss_dssp --CGGGEEEEEEEESCTTTTSCSEEEEEEETTTT--------------EEEEEETTTTEEEEEECGGGSCCSCEEEEETT
T ss_pred --cCCccceEEEecccCCCCCCccEEEEEcCCCC--------------cEEEEECCCCcEEEEccCCCccccCcceEECC
Confidence 23568999999 2 356999998632 4555555544433322 11
Q ss_pred -----ccceeeEEEccC----CCEEEEEeCCCCEEEEEEee---CCC-CCceeeeecCCCCCCC--ceeEC-CCCCEEEE
Q psy4771 246 -----LHFANGVELSAD----ESFVIVAETMSSRVHRYYLK---GPK-QGKSEVFIDGLPGLPD--NVKRD-SKGNFLVS 309 (337)
Q Consensus 246 -----~~~p~gia~~~d----g~~lyva~~~~~~I~~~~~~---g~~-~~~~~~~~~~~~g~Pd--gi~~d-~dG~l~va 309 (337)
.....|||++|+ ++.||+.-..+.+++++..+ ... ....+.+.+. +...+ ++++| ++|++|.+
T Consensus 214 ~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~k-g~~s~~~~~~~D~~~G~ly~~ 292 (381)
T 3q6k_A 214 KEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNR-GKYNDAIALAYDPKTKVIFFA 292 (381)
T ss_dssp EEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEEC-CTTCCEEEEEECTTTCEEEEE
T ss_pred EEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeec-CCCCCcceEEEeCCCCeEEEE
Confidence 125689999998 89999999999999999853 222 2233333332 11234 56786 88999999
Q ss_pred ecCC
Q psy4771 310 LVCP 313 (337)
Q Consensus 310 ~~~~ 313 (337)
....
T Consensus 293 ~~~~ 296 (381)
T 3q6k_A 293 EANT 296 (381)
T ss_dssp ESSS
T ss_pred eccC
Confidence 8766
No 128
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.80 E-value=4.6e-08 Score=94.49 Aligned_cols=78 Identities=15% Similarity=0.245 Sum_probs=59.4
Q ss_pred CCCCCCccEEEcCCCcEEE-EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--ccceeeEEEccCCCEEEEEe
Q psy4771 189 AKPQIPNSVTVDSDGMVYW-SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--LHFANGVELSADESFVIVAE 265 (337)
Q Consensus 189 ~~~~~pn~v~vd~~G~lyv-td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyva~ 265 (337)
..++.|++|++|++|+||| ||.+.... +. ........||++++.+|+++.++.. ...|+|++++||+++|||+-
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~~-g~--~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNA-GD--FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCS-GG--GTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCcc-cc--ccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4689999999999999999 88764210 00 0112344899999999998887754 46799999999999999987
Q ss_pred CCCC
Q psy4771 266 TMSS 269 (337)
Q Consensus 266 ~~~~ 269 (337)
...+
T Consensus 550 QHPG 553 (592)
T 4a9v_A 550 QHPG 553 (592)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 5543
No 129
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=5.9e-06 Score=76.82 Aligned_cols=211 Identities=13% Similarity=0.075 Sum_probs=115.6
Q ss_pred CccEEEe--eCCeEEEEe-c-CcEEEEEeCCceeEEEe-cCccccCccccCccCCcceEEECCCC-cEEEEECCCc-EEE
Q psy4771 64 GPEAVVK--HKGDLYMGV-D-GGHILKLSGGKLVPVVK-LGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFG-LYK 136 (337)
Q Consensus 64 ~P~~i~~--~~g~ly~d~-~-~g~I~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~g-v~~ 136 (337)
.|..+++ ++..||+.. . ++.|..+| .+.+.+.. + ..|.++.+.++| +.|++....| +..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i-------------~~~~~~~~~~~~~~~~~~~~~dg~~~~ 191 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL-------------SSPTCYHIHPGAPSTFYLLCAQGGLAK 191 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc-------------CCCceEEEEeCCCceEEEEcCCCCEEE
Confidence 5888888 456789543 3 57899999 65544433 2 123334555555 6777765544 777
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCC--CceeeCCCC-Ccc---cccceeeeccc---------cC--C----CCCCCCc
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIP--NSVTVDSDG-QTG---QTEQLISMDTE---------ID--G----AKPQIPN 195 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P--~~v~~~~~g-~~~---~~~~v~~~~~~---------~~--~----~~~~~pn 195 (337)
+|. +++............+. .| ....+++++ +++ ..+.+..++.. ++ . .....|.
T Consensus 192 vd~-~g~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~ 267 (373)
T 2mad_H 192 TDH-AGGAAGAGLVGAMLTAA---QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPG 267 (373)
T ss_pred EEC-CCcEEEEEeccccccCC---cceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecC
Confidence 887 56544221100000111 01 011122222 211 11223322211 00 0 0111345
Q ss_pred c---EEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCC-EEEEEeCCCCE
Q psy4771 196 S---VTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADES-FVIVAETMSSR 270 (337)
Q Consensus 196 ~---v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~-~lyva~~~~~~ 270 (337)
+ +++++||+ +|++...... .......+.|+++|.+++++..-......|.++++++||+ .+|+++...+.
T Consensus 268 g~~~~~~s~d~~~lyV~~~~~~~-----~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 268 GWQQVAYLKSSDGIYLLTSEQSA-----WKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred ceEeEEECCCCCEEEEEeccCCc-----ccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe
Confidence 5 88999875 9997653110 0001234689999999888744444445799999999999 89999888899
Q ss_pred EEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 271 VHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 271 I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
|.+|+.+..+.. ..... ....|.+|..
T Consensus 343 V~ViD~~t~~vv--~~i~~-vG~~P~~~~~ 369 (373)
T 2mad_H 343 LHIYDAGAGDQD--QSTVE-LGSGPQVLSV 369 (373)
T ss_pred EEEEECCCCCEE--eeecC-CCCCCcEEEE
Confidence 999998654321 11111 2235887765
No 130
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.68 E-value=7.8e-07 Score=80.02 Aligned_cols=201 Identities=14% Similarity=0.179 Sum_probs=118.4
Q ss_pred EEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEE
Q psy4771 68 VVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQ 146 (337)
Q Consensus 68 i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~ 146 (337)
+++ .++.+|+...+ |++++..... +..+.. . ........++ +|+||++....+++.+|++ |+...
T Consensus 65 ~~~~~~g~l~v~t~~--l~~~d~~g~~-~~~~~~--------~-~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~ 130 (330)
T 3hxj_A 65 PSIGKDGTIYFGSDK--VYAINPDGTE-KWRFDT--------K-KAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKW 130 (330)
T ss_dssp CEETTTTEECCSSCE--EEEECCCGGG-GGGSCC--------------CCEEEE-TTEEEEECTTSEEEEECTT-SCEEE
T ss_pred eEEecCCcEEEecCc--EEEECCCCcE-EEEEEC--------C-CCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEE
Confidence 344 47889966544 8888762111 100100 0 0111233444 7899999766679999998 55443
Q ss_pred EeccccccCCCCCCCCCceeeCCCCCcc--c-ccceeeeccccCC-----CCCCCCccEEEcCCCcEEEEcCCCCccCce
Q psy4771 147 LISMDTEIDGAKPQIPNSVTVDSDGQTG--Q-TEQLISMDTEIDG-----AKPQIPNSVTVDSDGMVYWSDSSTKYKSGL 218 (337)
Q Consensus 147 l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~-~~~v~~~~~~~~~-----~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~ 218 (337)
.... ... ....++++++|+++ + .+++..++..... ........+++|++|++|++. .
T Consensus 131 ~~~~----~~~---~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~t-~------- 195 (330)
T 3hxj_A 131 RFKT----KKA---IYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGS-D------- 195 (330)
T ss_dssp EEEC----SSC---CCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEES-S-------
T ss_pred EEcC----CCc---eeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEEe-C-------
Confidence 3221 111 23456778888887 3 3567766644100 112346778899999999887 3
Q ss_pred eeeeecCCccEEEEcCCCCeeE-EEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCc
Q psy4771 219 FEGLTSGSGRLIQYNPKTKKNK-VLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDN 297 (337)
Q Consensus 219 ~~~~~~~~G~v~~~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdg 297 (337)
.|+++|. +++.. ...........++++++| .||++.. .+.|.+++.++.. ...+.. ....+..
T Consensus 196 ---------~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~-~~gl~~~~~~g~~---~~~~~~-~~~~~~~ 259 (330)
T 3hxj_A 196 ---------KVYAINP-DGTEKWNFYAGYWTVTRPAISEDG-TIYVTSL-DGHLYAINPDGTE---KWRFKT-GKRIESS 259 (330)
T ss_dssp ---------SEEEECT-TSCEEEEECCSSCCCSCCEECTTS-CEEEEET-TTEEEEECTTSCE---EEEEEC-SSCCCSC
T ss_pred ---------EEEEECC-CCcEEEEEccCCcceeceEECCCC-eEEEEcC-CCeEEEECCCCCE---eEEeeC-CCCcccc
Confidence 6788884 44332 222223456788888887 5888875 4688888644321 111211 2234667
Q ss_pred eeECCCCCEEEEecCC
Q psy4771 298 VKRDSKGNFLVSLVCP 313 (337)
Q Consensus 298 i~~d~dG~l~va~~~~ 313 (337)
+.+|.+|++|++...+
T Consensus 260 ~~~~~~g~l~v~t~~g 275 (330)
T 3hxj_A 260 PVIGNTDTIYFGSYDG 275 (330)
T ss_dssp CEECTTSCEEEECTTC
T ss_pred ceEcCCCeEEEecCCC
Confidence 8899999999999774
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.68 E-value=3.9e-06 Score=73.24 Aligned_cols=215 Identities=16% Similarity=0.097 Sum_probs=125.7
Q ss_pred ccEEEe-eCCe-EEEEecCcEEEEEeCCc-eeEEEecCccccCccccCccCCcceEEECCCCcE-EEEEC----CCcEEE
Q psy4771 65 PEAVVK-HKGD-LYMGVDGGHILKLSGGK-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGAL-HVADA----YFGLYK 136 (337)
Q Consensus 65 P~~i~~-~~g~-ly~d~~~g~I~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~l-yVad~----~~gv~~ 136 (337)
..++++ .++. +++. .++.|+.|+..+ ........ ......+..++++++|+. +++.. ...|+.
T Consensus 44 v~~~~~spdg~~l~~~-~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLN-SEGLLYRLSLAGDPSPEKVDT--------GFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp CEEEEECTTSSEEEEE-ETTEEEEEESSSCCSCEECCC--------TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eEeeEECCCCCEEEEE-cCCeEEEEeCCCCCCceEecc--------ccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 445666 4555 4444 478899998643 22221110 011245678999999954 44442 134899
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc-----ccc--ceeeeccccCC-----CCCCCCccEEEcCCCc
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG-----QTE--QLISMDTEIDG-----AKPQIPNSVTVDSDGM 204 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~-----~~~--~v~~~~~~~~~-----~~~~~pn~v~vd~~G~ 204 (337)
++.++++...+... . ....++++++|+.+ ..+ .+..++..... .....+..++++++|+
T Consensus 115 ~~~~~~~~~~~~~~----~-----~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 115 LPSTGGTPRLMTKN----L-----PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGR 185 (297)
T ss_dssp EETTCCCCEECCSS----S-----SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSS
T ss_pred EECCCCceEEeecC----C-----CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCC
Confidence 99887776555431 1 13456788899865 112 34443211000 1123467889999987
Q ss_pred -EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCC----------CCEEEE
Q psy4771 205 -VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETM----------SSRVHR 273 (337)
Q Consensus 205 -lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~----------~~~I~~ 273 (337)
++++.... ....||.++..++....+.........++++|||+.|+++... ..+|+.
T Consensus 186 ~l~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 186 WIYFNSSRT------------GQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECTT------------SSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred EEEEEecCC------------CCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 66554321 1237888887767666555444556789999999988776643 257888
Q ss_pred EEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEEe
Q psy4771 274 YYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
+++++.+......+.. ..+....++++++|+ |+++.
T Consensus 254 ~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFG-GQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EETTSCSCEEEEEEEE-STTTSCSCCBCTTSSEEEEEE
T ss_pred EecCCCCceeeeccCC-CCcccccceECCCCCEEEEEE
Confidence 8886543222221112 234467889999998 44443
No 132
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.59 E-value=1.9e-05 Score=73.14 Aligned_cols=210 Identities=11% Similarity=0.052 Sum_probs=126.3
Q ss_pred ccCccEEEe-eCCeEE-EEecC---------------cEEEEEeC--C--ceeEEEecCccccCccccCccCCcceEEEC
Q psy4771 62 IHGPEAVVK-HKGDLY-MGVDG---------------GHILKLSG--G--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFD 120 (337)
Q Consensus 62 ~~~P~~i~~-~~g~ly-~d~~~---------------g~I~~~~~--~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d 120 (337)
+....++.+ ..+.|| .|.+. -+|+.+|. + ++.....+.... ......-+.|++|
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~-----~~~~S~l~di~VD 160 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL-----VEKPTYFGGFAVD 160 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG-----CCCGGGEEEEEEE
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh-----cccCCccceEEEe
Confidence 446777777 578999 77651 26888886 4 443333343221 1122346789998
Q ss_pred -C-------CCcEEEEECC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCC-ceeeCCCCCcccccceeeeccccCCCC
Q psy4771 121 -K-------NGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPN-SVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 121 -~-------~G~lyVad~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~-~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
. ++.+||+|.. .+|+.+|..+++..++..... .|+ ...+.-+| .-++ -
T Consensus 161 ~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~--------~pd~~~~~~i~G------~~~~--------~ 218 (381)
T 3q6k_A 161 VANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF--------KAERPTKFDYGG------KEYE--------F 218 (381)
T ss_dssp ESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG--------SCCSCEEEEETT------EEEE--------E
T ss_pred cccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC--------ccccCcceEECC------EEeE--------e
Confidence 2 4589999976 469999999998887764211 122 00000001 0000 0
Q ss_pred CCCCccEEEcCC----Cc-EEEEcCCCCccCceeeeeecCCccEEEEcC------C-CCeeEEEeccc--cceeeEEEc-
Q psy4771 191 PQIPNSVTVDSD----GM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNP------K-TKKNKVLIANL--HFANGVELS- 255 (337)
Q Consensus 191 ~~~pn~v~vd~~----G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~------~-~~~~~~~~~~~--~~p~gia~~- 255 (337)
....++|+++++ ++ |||.-.++. ++|++.. . ..+++.+-+.. ....+++++
T Consensus 219 ~~Gi~gIaLsp~~~~~~~~LYf~plss~--------------~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~ 284 (381)
T 3q6k_A 219 KAGIFGITLGDRDSEGNRPAYYLAGSAI--------------KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDP 284 (381)
T ss_dssp CCCEEEEEECCCCTTSCCEEEEEESSCS--------------EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECT
T ss_pred ccCceEEEecCCcCCCCeEEEEEECCCC--------------cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeC
Confidence 135789999986 54 999887754 3343321 0 12333333222 223356776
Q ss_pred cCCCEEEEEeCCCCEEEEEEeeC-CC-CCceeeeecCC-CCCCCceeECCCCCEEEEecCC
Q psy4771 256 ADESFVIVAETMSSRVHRYYLKG-PK-QGKSEVFIDGL-PGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 256 ~dg~~lyva~~~~~~I~~~~~~g-~~-~~~~~~~~~~~-~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
.+| .||+++...+.|.+++.++ .- ..+.++++... --+|+++++|.+|.||+....-
T Consensus 285 ~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 285 KTK-VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNGF 344 (381)
T ss_dssp TTC-EEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECSC
T ss_pred CCC-eEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECcc
Confidence 455 8999999999999999765 21 23445555421 1269999999999999998543
No 133
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.59 E-value=9.6e-06 Score=82.23 Aligned_cols=217 Identities=18% Similarity=0.145 Sum_probs=126.7
Q ss_pred eCCeEEEEecCcEEEEEeCCc--eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEe
Q psy4771 71 HKGDLYMGVDGGHILKLSGGK--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLI 148 (337)
Q Consensus 71 ~~g~ly~d~~~g~I~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~ 148 (337)
.+|.||++..+| +++++..+ ...+..+...... ..-.......|..|++|+|||+. ..||.++|+++++.+.+.
T Consensus 333 ~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~ 408 (758)
T 3ott_A 333 SKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKT--YPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYN 408 (758)
T ss_dssp TTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSS--SCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEeeCCc-ceeecccccccceeEEeccCCcC--CCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEee
Confidence 578999777665 88987632 1111111100000 00112346789999999999997 468999999988877664
Q ss_pred ccccccCCC-CCCCCCceeeCCCCCcc--c-ccceeeecccc------------------CCCCCCCCccEEEcCCCcEE
Q psy4771 149 SMDTEIDGA-KPQIPNSVTVDSDGQTG--Q-TEQLISMDTEI------------------DGAKPQIPNSVTVDSDGMVY 206 (337)
Q Consensus 149 ~~~~~~~g~-~~~~P~~v~~~~~g~~~--~-~~~v~~~~~~~------------------~~~~~~~pn~v~vd~~G~ly 206 (337)
... ..+. ....-..+..|++|++. + .+++..++.+. .+..-....++..|++|+||
T Consensus 409 ~~~--~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW 486 (758)
T 3ott_A 409 IVD--NTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVW 486 (758)
T ss_dssp EEC--CC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEE
T ss_pred cCC--CcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEE
Confidence 210 1110 00011246678888876 3 35676665221 11112345678899999999
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc----ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN----LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG 282 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~----~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~ 282 (337)
+..... +.|+++|+++++.+..... ...++.+..+.+| .||++.. +.|.+|+.+.....
T Consensus 487 i~~~t~--------------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~lWigt~--~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 487 VLLYNN--------------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDG-LLWVGFH--GGVMRINPKDESQQ 549 (758)
T ss_dssp EEETTC--------------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTS-CEEEEET--TEEEEECC--CCCC
T ss_pred EEccCC--------------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCC-CEEEEec--CceEEEecCCCceE
Confidence 822111 2689999988877665321 2356788888888 5999874 47999987654322
Q ss_pred ceeeeecCCCC-CCCceeECCCCCEEEEecCC
Q psy4771 283 KSEVFIDGLPG-LPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 283 ~~~~~~~~~~g-~Pdgi~~d~dG~l~va~~~~ 313 (337)
... .++++. ...+|..+ +|+||++...+
T Consensus 550 ~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~G 578 (758)
T 3ott_A 550 SIS--FGSFSNNEILSMTCV-KNSIWVSTTNG 578 (758)
T ss_dssp BCC--CCC---CCEEEEEEE-TTEEEEEESSC
T ss_pred Eec--ccCCCccceEEEEEC-CCCEEEECCCC
Confidence 211 122321 23456555 78999998666
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.56 E-value=1.5e-05 Score=74.96 Aligned_cols=137 Identities=15% Similarity=0.188 Sum_probs=92.2
Q ss_pred CCcceEEECCCCc-EEEEECC---CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 112 GRPLGIKFDKNGA-LHVADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~---~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
+....++++|+|+ |+++... ..|+.+|.++++...+..
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-------------------------------------- 264 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-------------------------------------- 264 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC--------------------------------------
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC--------------------------------------
Confidence 3467899999995 6645432 239999998887655432
Q ss_pred CCCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC
Q psy4771 188 GAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~ 266 (337)
.......+++++||+ |+++.... ....|+.+|..+++...+.........++++|||+.|+++..
T Consensus 265 --~~~~~~~~~~spdg~~l~~~s~~~------------g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 265 --GRSNNTEPTWFPDSQNLAFTSDQA------------GRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp --CSSCEEEEEECTTSSEEEEEECTT------------SSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred --CCCcccceEECCCCCEEEEEECCC------------CCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEEC
Confidence 112356788999997 66554321 123789999888876655444456678999999999988775
Q ss_pred C--CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC
Q psy4771 267 M--SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN 305 (337)
Q Consensus 267 ~--~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~ 305 (337)
. ...|+.+++++.. ...+... .....+++.++|+
T Consensus 331 ~~g~~~i~~~d~~~~~---~~~l~~~--~~~~~~~~spdg~ 366 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGG---VQVLSST--FLDETPSLAPNGT 366 (415)
T ss_dssp CSSCEEEEEEETTTCC---EEECCCS--SSCEEEEECTTSS
T ss_pred cCCceEEEEEECCCCC---EEEecCC--CCcCCeEEcCCCC
Confidence 4 3588888876532 2333322 2467788899987
No 135
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.51 E-value=3.1e-05 Score=69.05 Aligned_cols=177 Identities=8% Similarity=-0.039 Sum_probs=110.9
Q ss_pred cEEEe-eC-CeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCC
Q psy4771 66 EAVVK-HK-GDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~-g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g 142 (337)
.++++ .+ ..+++...++.|..|+..+...+..+. ........++++++|+.+++-... .|..+|..++
T Consensus 145 ~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 145 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---------GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee---------cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 34555 34 355677788888888864333332221 122457789999998555554344 4888898777
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
+...... .......++++++|..+++...
T Consensus 216 ~~~~~~~----------------------------------------~~~~v~~~~~s~~~~~l~~~~~----------- 244 (337)
T 1gxr_A 216 RQLQQHD----------------------------------------FTSQIFSLGYCPTGEWLAVGME----------- 244 (337)
T ss_dssp EEEEEEE----------------------------------------CSSCEEEEEECTTSSEEEEEET-----------
T ss_pred ceEeeec----------------------------------------CCCceEEEEECCCCCEEEEEcC-----------
Confidence 6544332 1123578889998875443322
Q ss_pred ecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
+|.|..+|..+++...+.........+++++|++.|+++. ..+.|..+++...+ ...... .......+++++
T Consensus 245 ---~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~---~~~~~~-~~~~v~~~~~s~ 316 (337)
T 1gxr_A 245 ---SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG-KDNLLNAWRTPYGA---SIFQSK-ESSSVLSCDISV 316 (337)
T ss_dssp ---TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC---EEEEEE-CSSCEEEEEECT
T ss_pred ---CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEec-CCCcEEEEECCCCe---EEEEec-CCCcEEEEEECC
Confidence 3578888888777655555556778999999998666554 46789999876432 111111 233467888999
Q ss_pred CCCEEEEe
Q psy4771 303 KGNFLVSL 310 (337)
Q Consensus 303 dG~l~va~ 310 (337)
+|++.++.
T Consensus 317 ~~~~l~~~ 324 (337)
T 1gxr_A 317 DDKYIVTG 324 (337)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEe
Confidence 99855544
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.50 E-value=2.1e-05 Score=73.88 Aligned_cols=139 Identities=14% Similarity=0.151 Sum_probs=92.6
Q ss_pred CCcceEEECCCCc-EEEEECCC---cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 112 GRPLGIKFDKNGA-LHVADAYF---GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~~---gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
.....+++.|+|+ |+++.... .|+.+|.++++...+...
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~------------------------------------- 221 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF------------------------------------- 221 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-------------------------------------
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-------------------------------------
Confidence 3467899999994 55554332 588999988877665421
Q ss_pred CCCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC
Q psy4771 188 GAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~ 266 (337)
......++++|||+ |+++.... ....|+.+|.++++...+.........++++|||+.|+++..
T Consensus 222 ---~~~~~~~~~spdg~~la~~~~~~------------g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 222 ---PRHNGAPAFSPDGSKLAFALSKT------------GSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp ---SSCEEEEEECTTSSEEEEEECTT------------SSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred ---CCcccCEEEcCCCCEEEEEEecC------------CCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEEC
Confidence 12357889999997 66555431 123799999988887666555556778999999998887764
Q ss_pred C--CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCE
Q psy4771 267 M--SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNF 306 (337)
Q Consensus 267 ~--~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l 306 (337)
. ..+|+++++++.. ...+.. .......+++++||+.
T Consensus 287 ~~g~~~i~~~d~~~~~---~~~l~~-~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGA---PQRITW-EGSQNQDADVSSDGKF 324 (415)
T ss_dssp TTSSCEEEEEETTSSC---CEECCC-SSSEEEEEEECTTSSE
T ss_pred CCCCcEEEEEECCCCC---EEEEec-CCCcccCeEECCCCCE
Confidence 3 3478888876543 222221 1223456788888873
No 137
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.46 E-value=0.00019 Score=64.58 Aligned_cols=228 Identities=13% Similarity=-0.002 Sum_probs=127.7
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
-.++++ .++ .|++...+|.|..|+..+...+..+. .......+++++++|+.+++-...+ |..+|..+
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD---------GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh---------hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 455666 344 56688889999999864333333332 1224467899999996665544444 88889887
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cc-----cceeeeccccCCC-------------------CCCC
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QT-----EQLISMDTEIDGA-------------------KPQI 193 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~-----~~v~~~~~~~~~~-------------------~~~~ 193 (337)
++....... .. ....++++++|+.+ .. +.|...+...... ....
T Consensus 106 ~~~~~~~~~----~~----~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 106 GQCVATWKS----PV----PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp CCEEEEEEC----SS----CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred CcEEEEeec----CC----CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 765544431 11 14557788888876 21 3343333211110 0014
Q ss_pred CccEEEcCCCcEEE----------EcCCCCc---------cCce----------eeeeecCCccEEEEcCCCCeeEEEec
Q psy4771 194 PNSVTVDSDGMVYW----------SDSSTKY---------KSGL----------FEGLTSGSGRLIQYNPKTKKNKVLIA 244 (337)
Q Consensus 194 pn~v~vd~~G~lyv----------td~~~~~---------~~~~----------~~~~~~~~G~v~~~d~~~~~~~~~~~ 244 (337)
...++++++|+..+ -|..... ...+ ..+....+|.|..+|..+++......
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 55666666654222 2222100 0111 11223445677888877776555454
Q ss_pred cccceeeEEEccCCCEEEEEeCCCC-------------EEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 245 NLHFANGVELSADESFVIVAETMSS-------------RVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 245 ~~~~p~gia~~~dg~~lyva~~~~~-------------~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
.-.....++++++++.++++..... .|..++..... ....+.. ..+....+++.++|++.++..
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQG-HFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEEC-CSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheec-ccCcEEEEEECCCCCEEEEEc
Confidence 5556788999999998888876543 56666653221 1222222 233467788999998666654
Q ss_pred C
Q psy4771 312 C 312 (337)
Q Consensus 312 ~ 312 (337)
.
T Consensus 335 ~ 335 (369)
T 3zwl_B 335 E 335 (369)
T ss_dssp T
T ss_pred C
Confidence 3
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.45 E-value=7.3e-05 Score=69.24 Aligned_cols=215 Identities=11% Similarity=0.050 Sum_probs=125.1
Q ss_pred ccEEEe-e-CC-eEEEEecCcEEEEEeCCce-------eEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCC-
Q psy4771 65 PEAVVK-H-KG-DLYMGVDGGHILKLSGGKL-------VPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYF- 132 (337)
Q Consensus 65 P~~i~~-~-~g-~ly~d~~~g~I~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~- 132 (337)
-.++++ . ++ .|++...+|.|..|+.... ..+..+ .........+++.++| +++++-...
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL---------EGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE---------ECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe---------cCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 355666 3 44 4558888999988875221 111111 1223457799999998 566664444
Q ss_pred cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccc-------c-CCCCCCCCccEEEc
Q psy4771 133 GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTE-------I-DGAKPQIPNSVTVD 200 (337)
Q Consensus 133 gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~-------~-~~~~~~~pn~v~vd 200 (337)
.|...|..+++........ ...+ ....++++++|+++ .++.|...+.. + .......+..+++.
T Consensus 155 ~i~iwd~~~~~~~~~~~~~-~~~~----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPD-VHPD----TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp CEEEEETTTTEEEEEECTT-TCCS----CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC
T ss_pred EEEEEECCCCCccEEEecC-CCCC----ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc
Confidence 4888898877655443100 1111 13557888888877 22334433311 1 11112236788899
Q ss_pred CCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 201 SDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 201 ~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
++|.++++.... ..+|.|..+|..+++. ............+++++|++.|+++....+.|..+++.
T Consensus 230 ~~~~~l~~g~~~-----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 230 SEGKILTTGFSR-----------MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp STTEEEEEEECT-----------TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred CCCcEEEEeccC-----------CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 998866554210 1245788888776542 11223344578899999999999988878899999987
Q ss_pred CCCC--CceeeeecCCCCCCCceeECCCCCE
Q psy4771 278 GPKQ--GKSEVFIDGLPGLPDNVKRDSKGNF 306 (337)
Q Consensus 278 g~~~--~~~~~~~~~~~g~Pdgi~~d~dG~l 306 (337)
.... .....+. ..+...++++.++|.+
T Consensus 299 ~~~~~~~~l~~~~--~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 299 SEAPFLHYLSMFS--SKESQRGMGYMPKRGL 327 (402)
T ss_dssp SSTTCEEEEEEEC--CSSCCSEEEECCGGGS
T ss_pred CCCcceEeecccc--cCCcccceEEeccccc
Confidence 5431 1112111 1233567777766643
No 139
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.44 E-value=0.00015 Score=67.29 Aligned_cols=148 Identities=7% Similarity=-0.040 Sum_probs=94.5
Q ss_pred CCcceEEECCCCcEEEEECC-CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
+...++++.++|+++++-.. ..|..+|..+++....... .
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---------------------------------------~ 258 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN---------------------------------------H 258 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC---------------------------------------C
T ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC---------------------------------------C
Confidence 44678889888865555433 3477788776544332210 1
Q ss_pred CCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEe-CCC
Q psy4771 191 PQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAE-TMS 268 (337)
Q Consensus 191 ~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~-~~~ 268 (337)
......+++.++|. ++++..+. .+|.|..+|..+++.......-.....++++++++.++++. ...
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs------------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGT------------MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD 326 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCT------------TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT
T ss_pred cceEEEEEECCCCCCEEEEecCC------------CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC
Confidence 23468899999764 66654321 24688888888776655555556678999999999887764 357
Q ss_pred CEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 269 SRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 269 ~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
+.|..+++..........+. +..+....++++++|.+.++..
T Consensus 327 g~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEEC
T ss_pred CcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEe
Confidence 89999998753221111122 2234467889999998555543
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.44 E-value=2.1e-05 Score=68.45 Aligned_cols=147 Identities=12% Similarity=0.051 Sum_probs=90.9
Q ss_pred CCcceEEECCCCcEEEEECCCcEEEEEcCC-CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAYFGLYKVNVTT-GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~-g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
....+++++++|+.+++.....|+.+|.++ ++...+... . .
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~----~----------------------------------~ 83 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTG----F----------------------------------A 83 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCT----T----------------------------------C
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccc----c----------------------------------c
Confidence 446789999999765554445699999887 765554320 0 1
Q ss_pred CCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCC
Q psy4771 191 PQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSS 269 (337)
Q Consensus 191 ~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~ 269 (337)
...+++++++++|+ ++++.... +....|+.++..+++...+.. ......++++||++.|+++....+
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVE-----------FGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTT-----------TSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETT
T ss_pred cccccceEECCCCCEEEEEEeCC-----------CCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCC
Confidence 23467899999997 44444221 124589999887776554433 334788899999998886665555
Q ss_pred EEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEEe
Q psy4771 270 RVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 270 ~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
.+..+.++-. .+....+.. ..+.+..++++++|+ ++++.
T Consensus 152 ~~~l~~~~~~-~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 152 VFDIYSMDID-SGVETRLTH-GEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEEEEEETT-TCCEEECCC-SSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEECC-CCcceEccc-CCCccccceECCCCCEEEEEe
Confidence 4444444311 112222222 234467788888887 44443
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.38 E-value=2.7e-05 Score=77.79 Aligned_cols=177 Identities=13% Similarity=0.148 Sum_probs=102.2
Q ss_pred CCcceEEECCCCc-EEEEE---------------------------------CCCcEEEEEcCCCeEEEEeccccccCCC
Q psy4771 112 GRPLGIKFDKNGA-LHVAD---------------------------------AYFGLYKVNVTTGQTEQLISMDTEIDGA 157 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad---------------------------------~~~gv~~vd~~~g~~~~l~~~~~~~~g~ 157 (337)
.++.+++++|||+ |+++. ....|+.+|.++++...+.... ...
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~- 257 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--PKE- 257 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS--CTT-
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC--CCc-
Confidence 4568999999994 55553 1123888898888766554210 000
Q ss_pred CCCCCCceeeCCCCCcc---ccc------ceeeecccc-----------CCCCCCCCccEEEcC--CCcEEEEcCCCCcc
Q psy4771 158 KPQIPNSVTVDSDGQTG---QTE------QLISMDTEI-----------DGAKPQIPNSVTVDS--DGMVYWSDSSTKYK 215 (337)
Q Consensus 158 ~~~~P~~v~~~~~g~~~---~~~------~v~~~~~~~-----------~~~~~~~pn~v~vd~--~G~lyvtd~~~~~~ 215 (337)
..+..++.++||+.+ ..+ .|...+... ........+++++.+ ||+++++....
T Consensus 258 --~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~--- 332 (706)
T 2z3z_A 258 --KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD--- 332 (706)
T ss_dssp --CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT---
T ss_pred --eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC---
Confidence 124568889999865 111 333332110 000111236789999 99844433221
Q ss_pred CceeeeeecCCccEEEEcCCCCeeEEEeccccceee-EEEccCCCEEEEEeCCCC----EEEEEEeeCCCCCceeeeecC
Q psy4771 216 SGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANG-VELSADESFVIVAETMSS----RVHRYYLKGPKQGKSEVFIDG 290 (337)
Q Consensus 216 ~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~g-ia~~~dg~~lyva~~~~~----~I~~~~~~g~~~~~~~~~~~~ 290 (337)
...+||.++.+++..+.+..+-..... +++++||+.||++....+ +|++++.++.. ...+..
T Consensus 333 ---------g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~- 399 (706)
T 2z3z_A 333 ---------GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDLTP- 399 (706)
T ss_dssp ---------SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEESCC-
T ss_pred ---------CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceeccC-
Confidence 123788888766665555443222334 799999999998887654 78888765432 222221
Q ss_pred CCCCCCceeECCCCCEEEEe
Q psy4771 291 LPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 291 ~~g~Pdgi~~d~dG~l~va~ 310 (337)
. +....+++++||+.++..
T Consensus 400 ~-~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 400 E-SGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp S-SSEEEEEECTTSSEEEEE
T ss_pred C-CceEEEEECCCCCEEEEE
Confidence 1 224567888888755544
No 142
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.38 E-value=0.00013 Score=64.95 Aligned_cols=179 Identities=9% Similarity=0.076 Sum_probs=112.9
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCcee--EEEecCccccCccccCccCCcceEEECCCCcEEEE-ECCCcEEEEEcC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLV--PVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVA-DAYFGLYKVNVT 140 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVa-d~~~gv~~vd~~ 140 (337)
.++++ .++ .+++...++.|..|+..... ....+. ........+++.++|+.+++ .....|..+|..
T Consensus 101 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT---------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp EEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE---------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc---------cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 45556 344 56688889999999863221 222221 12234678999999855544 433458888987
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
+++...... + .-.....++++++|..+++...
T Consensus 172 ~~~~~~~~~------~---------------------------------~~~~i~~~~~~~~~~~l~~~~~--------- 203 (337)
T 1gxr_A 172 NQTLVRQFQ------G---------------------------------HTDGASCIDISNDGTKLWTGGL--------- 203 (337)
T ss_dssp TTEEEEEEC------C---------------------------------CSSCEEEEEECTTSSEEEEEET---------
T ss_pred CCceeeeee------c---------------------------------ccCceEEEEECCCCCEEEEEec---------
Confidence 776544332 0 1224678899998875544322
Q ss_pred eeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
+|.|..+|..+++.......-.....++++++++.|+++.. .+.|..+++.... ...+.. ..+....+++
T Consensus 204 -----dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~~---~~~~~~-~~~~v~~~~~ 273 (337)
T 1gxr_A 204 -----DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME-SSNVEVLHVNKPD---KYQLHL-HESCVLSLKF 273 (337)
T ss_dssp -----TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET-TSCEEEEETTSSC---EEEECC-CSSCEEEEEE
T ss_pred -----CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC-CCcEEEEECCCCC---eEEEcC-CccceeEEEE
Confidence 45888889887776555544556788999999987777654 5688889876432 222222 2344678899
Q ss_pred CCCCCEEEEec
Q psy4771 301 DSKGNFLVSLV 311 (337)
Q Consensus 301 d~dG~l~va~~ 311 (337)
+++|++.++..
T Consensus 274 ~~~~~~l~~~~ 284 (337)
T 1gxr_A 274 AYCGKWFVSTG 284 (337)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEec
Confidence 99998555543
No 143
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.37 E-value=5.4e-06 Score=79.29 Aligned_cols=180 Identities=16% Similarity=0.268 Sum_probs=103.3
Q ss_pred CceeccCcccCccEEEe-eCC--eEEEEecCcEEEEEeC-Cce--eEEEecCcc-ccCccccCccCCcceEEECCC----
Q psy4771 54 AEKLFENEIHGPEAVVK-HKG--DLYMGVDGGHILKLSG-GKL--VPVVKLGKD-CYGFKYEQQCGRPLGIKFDKN---- 122 (337)
Q Consensus 54 ~~~~~~g~~~~P~~i~~-~~g--~ly~d~~~g~I~~~~~-~~~--~~~~~~g~~-~~~~~~~~~~~~P~Gl~~d~~---- 122 (337)
++.++++ +..|.+|++ .+| .+|+....|+|++++. +.. ..+..+... ..+.. ....+.+.||+++|+
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~-~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIK-GGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCS-SSCCCSEEEEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCcc-ccCCCcceeeEeCCCCcCC
Confidence 3445554 678999998 666 4998888999999975 322 122222110 00000 011355889999996
Q ss_pred CcEEEEECC-------------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc--cc-cceeeecccc
Q psy4771 123 GALHVADAY-------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG--QT-EQLISMDTEI 186 (337)
Q Consensus 123 G~lyVad~~-------------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~--~~-~~v~~~~~~~ 186 (337)
|.|||+-+. ..|.++....+. .+.. .. ..|+.+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~---------------------------~~~~d~~~~~~i~~~~--- 133 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKN---------------------------PHQVDLRTARVFLEVA--- 133 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTC---------------------------TTSBCGGGCEEEEEEE---
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCC---------------------------CCccCCCCceEEEEcC---
Confidence 799998531 124444332110 0000 00 0111110
Q ss_pred CCCCCCCCccEEEcCCCcEEEEcCCCCc----cCceeeeeecCCccEEEEcCCCC--------------------eeEEE
Q psy4771 187 DGAKPQIPNSVTVDSDGMVYWSDSSTKY----KSGLFEGLTSGSGRLIQYNPKTK--------------------KNKVL 242 (337)
Q Consensus 187 ~~~~~~~pn~v~vd~~G~lyvtd~~~~~----~~~~~~~~~~~~G~v~~~d~~~~--------------------~~~~~ 242 (337)
..........|++++||+|||+--.... ....+ -.....|.|+|+|+++. ..++.
T Consensus 134 ~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q-~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~ 212 (463)
T 2wg3_C 134 ELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMD-GLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVF 212 (463)
T ss_dssp ESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCT-TCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEE
T ss_pred CCCCcccCCcEeECCCCcEEEEeCCCCCCCCcccccc-CcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEE
Confidence 0112234678999999999998654321 00000 01345689999999863 24577
Q ss_pred eccccceeeEEEccC-----CC-EEEEEeC
Q psy4771 243 IANLHFANGVELSAD-----ES-FVIVAET 266 (337)
Q Consensus 243 ~~~~~~p~gia~~~d-----g~-~lyva~~ 266 (337)
..++..|.|++|+++ |+ ++|++|.
T Consensus 213 a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 213 AHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp EECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred EECCCCcceEEECCCCCCcccceEEEeccc
Confidence 889999999999997 33 6888886
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.37 E-value=7.5e-06 Score=80.12 Aligned_cols=140 Identities=11% Similarity=-0.026 Sum_probs=90.9
Q ss_pred eEEECCCC--cEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCC
Q psy4771 116 GIKFDKNG--ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQI 193 (337)
Q Consensus 116 Gl~~d~~G--~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~ 193 (337)
..++.++| .+|++....++..+|.++++.+.+... ..
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~---------------------------------------~~-- 152 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL---------------------------------------PG-- 152 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE---------------------------------------SS--
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC---------------------------------------CC--
Confidence 34555555 466665555666778888887766531 11
Q ss_pred CccEEEcCCCcEEE-EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCC-CEE
Q psy4771 194 PNSVTVDSDGMVYW-SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMS-SRV 271 (337)
Q Consensus 194 pn~v~vd~~G~lyv-td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~-~~I 271 (337)
++++++|||+..+ +... ....+.|+.+|.++++.+.+.......+.++++|||+.|+.++... .+|
T Consensus 153 -~~~~~spDG~~la~~~~~-----------~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 153 -FGFVSDIRGDLIAGLGFF-----------GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp -CEEEEEEETTEEEEEEEE-----------ETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred -ceEEECCCCCEEEEEEEc-----------CCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence 7889999998443 3221 1112479999998888877766555668999999999999666543 378
Q ss_pred EEEEeeCCCCCceeeeecCCCCCCCcee--------ECCCCCEEEEecC
Q psy4771 272 HRYYLKGPKQGKSEVFIDGLPGLPDNVK--------RDSKGNFLVSLVC 312 (337)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~g~Pdgi~--------~d~dG~l~va~~~ 312 (337)
+++++++++ .. ........+.+++ +++||.+|++...
T Consensus 221 ~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 221 VTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp EEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred EEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 888876542 22 2222223344566 8999987776643
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.36 E-value=0.00022 Score=64.33 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=110.4
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g 142 (337)
.++.+ .++ .+.+...++.|..|+..+...+..+. ........+++.++|+.+++-...+ +..++.+++
T Consensus 84 ~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~---------~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 84 VSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID---------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG 154 (321)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---------CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe---------CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC
Confidence 34555 344 45588889999999864333332221 1113356799999997777755544 777887766
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
+....... .......++++++|+..++-.
T Consensus 155 ~~~~~~~~---------------------------------------~~~~v~~~~~spdg~~lasg~------------ 183 (321)
T 3ow8_A 155 KKEYSLDT---------------------------------------RGKFILSIAYSPDGKYLASGA------------ 183 (321)
T ss_dssp SEEEEEEC---------------------------------------SSSCEEEEEECTTSSEEEEEE------------
T ss_pred ceeEEecC---------------------------------------CCceEEEEEECCCCCEEEEEc------------
Confidence 54333210 122357889999998655433
Q ss_pred ecCCccEEEEcCCCCeeEEEecc-ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeEC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIAN-LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRD 301 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d 301 (337)
.+|.|..+|..+++......+ -...+.++++||++.|+ +-...+.|..+++.... ....+. +..+....+++.
T Consensus 184 --~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~-s~s~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~~~~s 257 (321)
T 3ow8_A 184 --IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV-TASDDGYIKIYDVQHAN--LAGTLS-GHASWVLNVAFC 257 (321)
T ss_dssp --TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEE-EECTTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEEC
T ss_pred --CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEE-EEcCCCeEEEEECCCcc--eeEEEc-CCCCceEEEEEC
Confidence 246888888888765444443 33458899999997554 44556788888875432 122222 222335678888
Q ss_pred CCCCEEEEec
Q psy4771 302 SKGNFLVSLV 311 (337)
Q Consensus 302 ~dG~l~va~~ 311 (337)
++|.+.++..
T Consensus 258 p~~~~l~s~s 267 (321)
T 3ow8_A 258 PDDTHFVSSS 267 (321)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEe
Confidence 8888655544
No 146
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.34 E-value=1.4e-05 Score=80.92 Aligned_cols=178 Identities=16% Similarity=0.160 Sum_probs=109.0
Q ss_pred EEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEE
Q psy4771 67 AVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTE 145 (337)
Q Consensus 67 ~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~ 145 (337)
++.. .+|.||+...+| +++++..+.. +..... ........+. +.+|+|||+.. .|++++|++++++.
T Consensus 67 ~i~~d~~g~lWigT~~G-l~~yd~~~~~-f~~~~~--------~~~~~i~~i~-~~~g~lWigt~-~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 67 CGVIIDNTYLYMGTDNG-ILVYNYRADR-YEQPET--------DFPTDVRTMA-LQGDTLWLGAL-NGLYTYQLQSRKLT 134 (758)
T ss_dssp EEEEETTTEEEEEETTE-EEEEETTTTE-ECCCSC--------CCCSCEEEEE-EETTEEEEEET-TEEEEEETTTCCEE
T ss_pred EEEEcCCCcEEEEeCCC-eEEEeCCCCE-EECccc--------CCCceEEEEE-ecCCcEEEEcC-CcceeEeCCCCeEE
Confidence 4444 578999887776 8999974321 211000 0111233454 35789999974 49999999887776
Q ss_pred EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecC
Q psy4771 146 QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSG 225 (337)
Q Consensus 146 ~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~ 225 (337)
.+... ..+. +......+..|++|+||+....
T Consensus 135 ~~~~~---~~~l--------------------------------~~~~i~~i~~d~~g~lWigt~~-------------- 165 (758)
T 3ott_A 135 SFDTR---RNGL--------------------------------PNNTIYSIIRTKDNQIYVGTYN-------------- 165 (758)
T ss_dssp EECHH---HHCC--------------------------------SCSCEEEEEECTTCCEEEEETT--------------
T ss_pred EeccC---CCCc--------------------------------CCCeEEEEEEcCCCCEEEEeCC--------------
Confidence 65321 1111 2234678889999999987642
Q ss_pred CccEEEEcCCCCeeEEEeccc------cceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC-CCCCce
Q psy4771 226 SGRLIQYNPKTKKNKVLIANL------HFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP-GLPDNV 298 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~------~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~-g~Pdgi 298 (337)
.|++|++.+++........ ...+.|..+.+++.|||+.. +.|.+|+..... ...+.. ++ .....|
T Consensus 166 --Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~~~~~~~---~~~~~~-l~~~~i~~i 237 (758)
T 3ott_A 166 --GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--GYLFQYFPSTGQ---IKQTEA-FHNNSIKSL 237 (758)
T ss_dssp --EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--EEEEEEETTTTE---EEEEEE-EEEEEEEEE
T ss_pred --CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--CCCeEEcCCCCe---EEeccC-CCCCeEEEE
Confidence 6888888777654332111 12456777777778999773 478888864321 111111 11 124568
Q ss_pred eECCCCCEEEEecCC
Q psy4771 299 KRDSKGNFLVSLVCP 313 (337)
Q Consensus 299 ~~d~dG~l~va~~~~ 313 (337)
+.|.+|++|++...+
T Consensus 238 ~~d~~g~lWigT~~G 252 (758)
T 3ott_A 238 ALDGNGDLLAGTDNG 252 (758)
T ss_dssp EECTTCCEEEEETTE
T ss_pred EEcCCCCEEEEeCCc
Confidence 899999999998544
No 147
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.31 E-value=0.0002 Score=64.83 Aligned_cols=174 Identities=9% Similarity=0.071 Sum_probs=107.5
Q ss_pred eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEec
Q psy4771 71 HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLIS 149 (337)
Q Consensus 71 ~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~ 149 (337)
.++.+.+...++.|..|+..+...+..+. ...+....+++.++|+++++-...+ |...|..+++......
T Consensus 153 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 153 DDNQIVTSSGDTTCALWDIETGQQTTTFT---------GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred CCCcEEEEECCCcEEEEECCCCcEEEEEc---------CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 56677788888888888864333333221 1224467899999998777755444 8888887665433221
Q ss_pred cccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccE
Q psy4771 150 MDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRL 229 (337)
Q Consensus 150 ~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v 229 (337)
+ .-...+.+++.++|+.+++-.. +|.|
T Consensus 224 ------~---------------------------------h~~~v~~v~~~p~~~~l~s~s~--------------d~~v 250 (340)
T 1got_B 224 ------G---------------------------------HESDINAICFFPNGNAFATGSD--------------DATC 250 (340)
T ss_dssp ------C---------------------------------CSSCEEEEEECTTSSEEEEEET--------------TSCE
T ss_pred ------C---------------------------------CcCCEEEEEEcCCCCEEEEEcC--------------CCcE
Confidence 1 1224688999999986655433 4577
Q ss_pred EEEcCCCCeeEEEecc---ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCE
Q psy4771 230 IQYNPKTKKNKVLIAN---LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNF 306 (337)
Q Consensus 230 ~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l 306 (337)
..+|..+++....... ......++++|+|+.|..+ ...+.|..++..... ....+.. ..+....+++.++|.+
T Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g-~~d~~i~vwd~~~~~--~~~~~~~-h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YDDFNCNVWDALKAD--RAGVLAG-HDNRVSCLGVTDDGMA 326 (340)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC--EEEEEEC-CSSCEEEEEECTTSSC
T ss_pred EEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE-CCCCeEEEEEcccCc--EeeEeec-CCCcEEEEEEcCCCCE
Confidence 8888776654332221 1245789999999855554 456789888864321 1223322 2333567888888875
Q ss_pred EEEe
Q psy4771 307 LVSL 310 (337)
Q Consensus 307 ~va~ 310 (337)
.++.
T Consensus 327 l~s~ 330 (340)
T 1got_B 327 VATG 330 (340)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 148
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.30 E-value=0.00029 Score=63.48 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=108.7
Q ss_pred EEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCe
Q psy4771 67 AVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQ 143 (337)
Q Consensus 67 ~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~ 143 (337)
.+++ .++ .+.+...++.|..|+.........+. ........++++++|+++++-...+ |..+|..+++
T Consensus 127 ~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~---------~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD---------TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 197 (321)
T ss_dssp CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE---------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec---------CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 3455 343 44577778888777753222221111 1123467899999997666644444 8888988776
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
...... + .-...+.++++++|.+.++-..
T Consensus 198 ~~~~~~------~---------------------------------h~~~v~~l~~spd~~~l~s~s~------------ 226 (321)
T 3ow8_A 198 LLHTLE------G---------------------------------HAMPIRSLTFSPDSQLLVTASD------------ 226 (321)
T ss_dssp EEEEEC------C---------------------------------CSSCCCEEEECTTSCEEEEECT------------
T ss_pred EEEEEc------c---------------------------------cCCceeEEEEcCCCCEEEEEcC------------
Confidence 543322 1 1123688999999986665543
Q ss_pred cCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 224 SGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
+|.|..+|..+++..... ........++++||++.|+.+ ...+.|..+++...+ ....+.. ..+....+++.+
T Consensus 227 --dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~D~~v~iwd~~~~~--~~~~~~~-h~~~v~~v~~s~ 300 (321)
T 3ow8_A 227 --DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSS-SSDKSVKVWDVGTRT--CVHTFFD-HQDQVWGVKYNG 300 (321)
T ss_dssp --TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECT
T ss_pred --CCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCE--EEEEEcC-CCCcEEEEEECC
Confidence 457788887766543333 334456889999999865554 456788888875321 1223322 223356788999
Q ss_pred CCCEEEEec
Q psy4771 303 KGNFLVSLV 311 (337)
Q Consensus 303 dG~l~va~~ 311 (337)
+|...++..
T Consensus 301 ~g~~l~s~~ 309 (321)
T 3ow8_A 301 NGSKIVSVG 309 (321)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 998666553
No 149
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.24 E-value=0.00014 Score=66.61 Aligned_cols=186 Identities=11% Similarity=0.057 Sum_probs=114.2
Q ss_pred ccEEEe-eCC--eEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECC-CcEEEE
Q psy4771 65 PEAVVK-HKG--DLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAY-FGLYKV 137 (337)
Q Consensus 65 P~~i~~-~~g--~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~-~gv~~v 137 (337)
-.++++ .++ .+++...++.|..|+.. +....... ........++++.+ +++++++-.. ..|...
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG---------MGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC---------CSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec---------CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 345666 444 56688889999999863 33222211 01234567899999 5555554334 448888
Q ss_pred EcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCc
Q psy4771 138 NVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSG 217 (337)
Q Consensus 138 d~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~ 217 (337)
|..+.....+... .+ .-.....+++.++|...++-..
T Consensus 147 d~~~~~~~~~~~~----~~---------------------------------~~~~v~~~~~~~~~~~l~~~~~------ 183 (383)
T 3ei3_B 147 DFSGSVIQVFAKT----DS---------------------------------WDYWYCCVDVSVSRQMLATGDS------ 183 (383)
T ss_dssp ETTSCEEEEEECC----CC---------------------------------SSCCEEEEEEETTTTEEEEEET------
T ss_pred ECCCCceEEEecc----CC---------------------------------CCCCeEEEEECCCCCEEEEECC------
Confidence 8887666555431 10 1134678899999885544332
Q ss_pred eeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCC-CceeeeecCCCCCCC
Q psy4771 218 LFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQ-GKSEVFIDGLPGLPD 296 (337)
Q Consensus 218 ~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~-~~~~~~~~~~~g~Pd 296 (337)
+|.|..+|........+.........++++++++.++++-...+.|..+++..... +....... ..+...
T Consensus 184 --------d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~ 254 (383)
T 3ei3_B 184 --------TGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP-HEKPVN 254 (383)
T ss_dssp --------TSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE-CSSCEE
T ss_pred --------CCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec-CCCceE
Confidence 45788888765555555555567789999999984555555678999999864221 22211122 234467
Q ss_pred ceeECC-CCCEEEEec
Q psy4771 297 NVKRDS-KGNFLVSLV 311 (337)
Q Consensus 297 gi~~d~-dG~l~va~~ 311 (337)
.+++++ +|++.++..
T Consensus 255 ~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 255 AAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEEECTTTSCEEEEEE
T ss_pred EEEEcCCCCCEEEEEc
Confidence 889999 887555443
No 150
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.23 E-value=0.00061 Score=65.82 Aligned_cols=207 Identities=15% Similarity=0.122 Sum_probs=118.8
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g 142 (337)
.++++ .++ .+.+...++.|..|+..... +..+. .......++++.++|+.+++-...+ +...|..+.
T Consensus 307 ~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~---------~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~ 376 (577)
T 2ymu_A 307 WGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTLT---------GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 376 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEEe---------CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC
Confidence 45566 344 45577778888777753221 11111 1224467899999997666544445 666776554
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcc---ccc-ceeeeccc------cCCCCCCCCccEEEcCCCcEEEEcCCC
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---QTE-QLISMDTE------IDGAKPQIPNSVTVDSDGMVYWSDSST 212 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~~~-~v~~~~~~------~~~~~~~~pn~v~vd~~G~lyvtd~~~ 212 (337)
.+..+.. ..+ ....++++++|+++ ..+ .|...+.. +.+ .-....++++.+|+...++-..
T Consensus 377 ~~~~~~~----~~~----~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~- 446 (577)
T 2ymu_A 377 LLQTLTG----HSS----SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDDQTIASASD- 446 (577)
T ss_dssp EEEEEEC----CSS----CEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEET-
T ss_pred EEEEecC----CCC----CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC-CCCCeEEEEECCCCCEEEEEcC-
Confidence 4444432 111 13568899999987 233 33333211 000 1233567888888875544322
Q ss_pred CccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCC
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLP 292 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 292 (337)
+|.|..+|..+.....+...-.....++++||++.|..+. ..+.|..++.++. ....+.. ..
T Consensus 447 -------------d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~-~d~~i~iw~~~~~---~~~~~~~-h~ 508 (577)
T 2ymu_A 447 -------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQ---LLQTLTG-HS 508 (577)
T ss_dssp -------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSC---EEEEEEC-CS
T ss_pred -------------CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCCC---EEEEEeC-CC
Confidence 3567777765555555544455678999999998665544 4577888875432 1222222 22
Q ss_pred CCCCceeECCCCCEEEEe
Q psy4771 293 GLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 293 g~Pdgi~~d~dG~l~va~ 310 (337)
+....+++.++|++.++.
T Consensus 509 ~~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 509 SSVRGVAFSPDGQTIASA 526 (577)
T ss_dssp SCEEEEEECTTSSCEEEE
T ss_pred CCEEEEEEcCCCCEEEEE
Confidence 335678888888755544
No 151
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.23 E-value=0.0001 Score=69.31 Aligned_cols=184 Identities=15% Similarity=0.095 Sum_probs=109.0
Q ss_pred EEEe--eCC-eEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-EEEEEc
Q psy4771 67 AVVK--HKG-DLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-LYKVNV 139 (337)
Q Consensus 67 ~i~~--~~g-~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v~~vd~ 139 (337)
+|++ .++ .|.++..+|.|..|+. ++...+..+. ...+...+|+|.| +++++++-+..+ |...|.
T Consensus 124 ~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~---------gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 124 SLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI---------GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC---------SSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc---------CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 4666 244 5568999999999975 3322222221 1224467999997 576666655555 778898
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCcee
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLF 219 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~ 219 (337)
+++....+... .. .......++++++|.+.++-..
T Consensus 195 ~~~~~~~~~~~----~~---------------------------------~~~~~~~~~~~~~~~~l~~g~~-------- 229 (435)
T 4e54_B 195 KGNILRVFASS----DT---------------------------------INIWFCSLDVSASSRMVVTGDN-------- 229 (435)
T ss_dssp TSCEEEEEECC----SS---------------------------------CSCCCCCEEEETTTTEEEEECS--------
T ss_pred cCCceeEEecc----CC---------------------------------CCccEEEEEECCCCCEEEEEeC--------
Confidence 87766655431 11 1223567889999886655432
Q ss_pred eeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCcee
Q psy4771 220 EGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVK 299 (337)
Q Consensus 220 ~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~ 299 (337)
+|.|..+|..+..+..+...-...+.++++|+++.++++-...+.|..+++.....................++
T Consensus 230 ------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 303 (435)
T 4e54_B 230 ------VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC 303 (435)
T ss_dssp ------SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred ------CCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence 45788888765554433333445688999999887777776678888888753221111000010111234566
Q ss_pred ECCCCCEEEEe
Q psy4771 300 RDSKGNFLVSL 310 (337)
Q Consensus 300 ~d~dG~l~va~ 310 (337)
++++|++.++.
T Consensus 304 ~spdg~~l~s~ 314 (435)
T 4e54_B 304 FSPDGARLLTT 314 (435)
T ss_dssp BCTTSSEEEEE
T ss_pred ECCCCCeeEEE
Confidence 77777644443
No 152
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.21 E-value=6.9e-05 Score=67.56 Aligned_cols=168 Identities=8% Similarity=0.091 Sum_probs=99.0
Q ss_pred EEeeCCeEE-EE---ecCcEEEEEeC-Cc-eeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC-CcEEEEEc
Q psy4771 68 VVKHKGDLY-MG---VDGGHILKLSG-GK-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY-FGLYKVNV 139 (337)
Q Consensus 68 i~~~~g~ly-~d---~~~g~I~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~-~gv~~vd~ 139 (337)
+++.++.|| ++ ..+.+|++++. |+ .+.+.. .. . ++++++| .||+++.. ..|++++.
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~-----------~~-~----~~~~~~g~~iy~t~~g~~~Iy~~~l 174 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKN-----------HY-L----FTCNTSDRYFYYNNPKNGQLYRYDT 174 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEES-----------SC-C----CCSEEETTEEEEECTTTCCEEEEET
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeC-----------CC-c----eEeeEECCEEEEEeCCCceEEEEEC
Confidence 444677887 87 67789999986 32 233321 10 1 2345555 89999863 45999999
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---c-c--cceeeeccccCCC-CCCCCccEEEcCCC-cEEEEcCC
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---Q-T--EQLISMDTEIDGA-KPQIPNSVTVDSDG-MVYWSDSS 211 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~-~--~~v~~~~~~~~~~-~~~~pn~v~vd~~G-~lyvtd~~ 211 (337)
+++..+++.. + +....+.|+|+.+ . . ..|..+..+.... .+..-.-..++++| .||+++..
T Consensus 175 ~g~~~~~l~~------~-----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 175 ASQSEALFYD------C-----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANIEHYNVYGSLIFYQRGG 243 (302)
T ss_dssp TTTEEEEEEC------S-----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCEEEEEEETTEEEEEECS
T ss_pred CCCCEEEEeC------C-----CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCcceEEECCCEEEEEECC
Confidence 8887776643 1 1223345666665 1 1 1344443221111 12111223467766 48887433
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~ 279 (337)
. .+.|++++.++...+++..+ +..+++..+++||+++...+.|.++.++|.
T Consensus 244 ~-------------~~~i~~~~~DG~~r~~l~~~----~~~~i~i~~d~Iy~td~~~~~i~~~~~dGs 294 (302)
T 3s25_A 244 D-------------NPALCVVKNDGTGFKELAKG----EFCNINVTSQYVYFTDFVSNKEYCTSTQNP 294 (302)
T ss_dssp S-------------SCEEEEEETTSCCCEEEEES----CEEEEEECSSEEEEEETTTCCEEEEESSSC
T ss_pred C-------------CcEEEEEECCCCccEEeeCC----ccceEEEeCCEEEEEECCCCeEEEEECCCC
Confidence 1 14788888876555555543 123455577799999988888999988775
No 153
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.20 E-value=1.5e-05 Score=77.01 Aligned_cols=111 Identities=19% Similarity=0.280 Sum_probs=75.2
Q ss_pred ccCccEEEe--eCCeEEEEec----------------------CcEEEEEeCC--c-------eeEEEecCcccc-----
Q psy4771 62 IHGPEAVVK--HKGDLYMGVD----------------------GGHILKLSGG--K-------LVPVVKLGKDCY----- 103 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly~d~~----------------------~g~I~~~~~~--~-------~~~~~~~g~~~~----- 103 (337)
+..||++++ .++.+|+.+. .|+|+||.+. . +..+..-|....
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 448999999 5889995432 2789999751 1 222222232210
Q ss_pred -----CccccCccCCcceEEECCCCcEEE-EECC------------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCce
Q psy4771 104 -----GFKYEQQCGRPLGIKFDKNGALHV-ADAY------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSV 165 (337)
Q Consensus 104 -----~~~~~~~~~~P~Gl~~d~~G~lyV-ad~~------------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v 165 (337)
+......+..|.+|+||++|+||| +|.. ++++++++++|+++.++.. .
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~---P----------- 528 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---P----------- 528 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC---C-----------
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC---C-----------
Confidence 001124578999999999999999 6642 1589999988998888741 0
Q ss_pred eeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcC
Q psy4771 166 TVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 210 (337)
Q Consensus 166 ~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~ 210 (337)
....|||+++++|++ |||+-.
T Consensus 529 ------------------------~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 529 ------------------------IGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp ------------------------TTCEEEEEEECTTSSEEEEEEE
T ss_pred ------------------------CCccccCCEECCCCCEEEEEEe
Confidence 234589999999986 777654
No 154
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.20 E-value=1.5e-05 Score=76.24 Aligned_cols=167 Identities=19% Similarity=0.239 Sum_probs=94.8
Q ss_pred cCCcceEEECCCC--cEEEEECCCcEEEEEcCCCeE-EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 111 CGRPLGIKFDKNG--ALHVADAYFGLYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 111 ~~~P~Gl~~d~~G--~lyVad~~~gv~~vd~~~g~~-~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
+..|.+|++.++| +|||++....|++++.++... ..+... |.-++- ...
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~-----------~~~~~~-----------------g~~ 64 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDI-----------HKLVQS-----------------GIK 64 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEEC-----------TTTBCC-----------------CCS
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCC-----------cceecc-----------------Ccc
Confidence 5679999999998 499998654588887654321 111110 000000 000
Q ss_pred CCCCCCCccEEEcCC----CcEEEEcCCCCc--cCceeeeeecCCccEEEEcCCCC--------eeEEEec-----cccc
Q psy4771 188 GAKPQIPNSVTVDSD----GMVYWSDSSTKY--KSGLFEGLTSGSGRLIQYNPKTK--------KNKVLIA-----NLHF 248 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~----G~lyvtd~~~~~--~~~~~~~~~~~~G~v~~~d~~~~--------~~~~~~~-----~~~~ 248 (337)
......+.+|+++|+ |.||++.+...- .+.. .....+|.|+....+ +.+++.+ ..++
T Consensus 65 ~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~----~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~ 140 (463)
T 2wg3_C 65 GGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGP----HDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL 140 (463)
T ss_dssp SSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSS----SCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC
T ss_pred ccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCC----cccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc
Confidence 001244678999985 889987542110 0000 000125555443211 1222222 2356
Q ss_pred eeeEEEccCCCEEEEEeCC-----------------CCEEEEEEeeCCC------C-----------CceeeeecCCCCC
Q psy4771 249 ANGVELSADESFVIVAETM-----------------SSRVHRYYLKGPK------Q-----------GKSEVFIDGLPGL 294 (337)
Q Consensus 249 p~gia~~~dg~~lyva~~~-----------------~~~I~~~~~~g~~------~-----------~~~~~~~~~~~g~ 294 (337)
...|+|+||| +|||+-.. .+.|+|++++|.. . ...++++-++-.
T Consensus 141 g~~l~fgpDG-~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN- 218 (463)
T 2wg3_C 141 GGQLLFGPDG-FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD- 218 (463)
T ss_dssp EEEEEECTTS-CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-
T ss_pred CCcEeECCCC-cEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-
Confidence 6789999999 59998533 3579999998731 0 124677766555
Q ss_pred CCceeECCC-----CC--EEEEec
Q psy4771 295 PDNVKRDSK-----GN--FLVSLV 311 (337)
Q Consensus 295 Pdgi~~d~d-----G~--l~va~~ 311 (337)
|.||++|++ |. +|++..
T Consensus 219 p~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 219 PGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CCBEEEESSCSSTTCSEEEEEECC
T ss_pred cceEEECCCCCCcccceEEEeccc
Confidence 999999997 64 555664
No 155
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.19 E-value=0.0003 Score=63.59 Aligned_cols=215 Identities=10% Similarity=-0.006 Sum_probs=120.8
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVT 140 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~ 140 (337)
.++++ .++ .+++...++.|..|+. ++...+..+. .......++++.++|+++++-... .|..+|.+
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK---------EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE---------CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec---------CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 34555 344 4557778898888875 3322332221 122456799999999666554444 47777877
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeecccc----------CCCCCCCCccEEEcCCCcEE
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEI----------DGAKPQIPNSVTVDSDGMVY 206 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~----------~~~~~~~pn~v~vd~~G~ly 206 (337)
+++........ ...+ ....++++++|+++ .++.|...+... ..........+++.++|+.+
T Consensus 83 ~~~~~~~~~~~-~~~~----~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 83 GRTWKPTLVIL-RINR----AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp TTEEEEEEECC-CCSS----CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred CCeeeeeEEee-cCCC----ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 77644332210 1111 24557888888877 223333322111 01113446788888888755
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcC------------------CCCeeEE-EeccccceeeEEEccCCCEEEEEeCC
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNP------------------KTKKNKV-LIANLHFANGVELSADESFVIVAETM 267 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~------------------~~~~~~~-~~~~~~~p~gia~~~dg~~lyva~~~ 267 (337)
++... +|.|..+|. ..++... +...-.....++++++++.|+++. .
T Consensus 158 ~~~~~--------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 222 (372)
T 1k8k_C 158 AAGSC--------------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-H 222 (372)
T ss_dssp EEEET--------------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-T
T ss_pred EEEcC--------------CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-C
Confidence 44332 346666663 2333322 223344578999999998666665 4
Q ss_pred CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEecC
Q psy4771 268 SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 268 ~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
.+.|..+++...+ ....+.. .......++++++|.+.++...
T Consensus 223 d~~i~i~d~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~d 264 (372)
T 1k8k_C 223 DSTVCLADADKKM--AVATLAS-ETLPLLAVTFITESSLVAAGHD 264 (372)
T ss_dssp TTEEEEEEGGGTT--EEEEEEC-SSCCEEEEEEEETTEEEEEETT
T ss_pred CCEEEEEECCCCc--eeEEEcc-CCCCeEEEEEecCCCEEEEEeC
Confidence 6789999986432 1222222 2223567888888876665533
No 156
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.18 E-value=0.00021 Score=69.08 Aligned_cols=176 Identities=15% Similarity=0.132 Sum_probs=105.7
Q ss_pred ccEEEe-eCCe-EEEEecCcEEEEEeC-CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcC
Q psy4771 65 PEAVVK-HKGD-LYMGVDGGHILKLSG-GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVT 140 (337)
Q Consensus 65 P~~i~~-~~g~-ly~d~~~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~ 140 (337)
..++++ .++. |.+...++.|..|+. ++. +..+. .......++++.++++.+++-...+ |...|..
T Consensus 388 v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~--~~~~~---------~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 388 VRGVAFSPDGQTIASASDDKTVKLWNRNGQL--LQTLT---------GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTTCCE--EEEEE---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCE--EEEec---------CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 345666 4444 447777887777775 222 11111 1223467899999996665544444 7777766
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
+..+..+.. .-...+.++++++|++.++-..
T Consensus 457 ~~~~~~~~~----------------------------------------~~~~v~~~~~spd~~~las~~~--------- 487 (577)
T 2ymu_A 457 GQLLQTLTG----------------------------------------HSSSVRGVAFSPDGQTIASASD--------- 487 (577)
T ss_dssp SCEEEEEEC----------------------------------------CSSCEEEEEECTTSCEEEEEET---------
T ss_pred CCEEEEEcC----------------------------------------CCCCEEEEEEcCCCCEEEEEeC---------
Confidence 544444432 1123578999999986655432
Q ss_pred eeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
+|.|..+|..+.....+...-...+.++++|||+.|..+. ..+.|..++.++. ....+.. ..+...++++
T Consensus 488 -----d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~dg~v~lwd~~~~---~~~~~~~-h~~~v~~~~f 557 (577)
T 2ymu_A 488 -----DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQ---LLQTLTG-HSSSVWGVAF 557 (577)
T ss_dssp -----TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTSC---EEEEEEC-CSSCEEEEEE
T ss_pred -----CCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE-CcCEEEEEeCCCC---EEEEEcC-CCCCEEEEEE
Confidence 3467777765444444444455678999999998666554 4567888875432 1223322 2334578899
Q ss_pred CCCCCEEEEe
Q psy4771 301 DSKGNFLVSL 310 (337)
Q Consensus 301 d~dG~l~va~ 310 (337)
.+||++.++.
T Consensus 558 s~dg~~l~s~ 567 (577)
T 2ymu_A 558 SPDGQTIASA 567 (577)
T ss_dssp CTTSSCEEEE
T ss_pred cCCCCEEEEE
Confidence 9999866654
No 157
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.15 E-value=0.0015 Score=59.85 Aligned_cols=181 Identities=12% Similarity=0.119 Sum_probs=103.4
Q ss_pred CCcceEEECCCCc-EEEEECC-Cc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---cccceeeeccc
Q psy4771 112 GRPLGIKFDKNGA-LHVADAY-FG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---QTEQLISMDTE 185 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~-~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~~~~v~~~~~~ 185 (337)
.....++|.|||+ |.++... .+ |...|.++++...... ..+. -..+++++||+++ +.+.+..+...
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~----~~~~----V~~v~fspdg~~l~s~s~~~~~~~~~~ 205 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE----TRGE----VKDLHFSTDGKVVAYITGSSLEVISTV 205 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE----CSSC----CCEEEECTTSSEEEEECSSCEEEEETT
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC----CCCc----eEEEEEccCCceEEeccceeEEEEEec
Confidence 3467899999995 5566433 34 7778998887654442 1221 3568999999988 44455444321
Q ss_pred cCC--------CCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeE-----EEeccccceeeE
Q psy4771 186 IDG--------AKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNK-----VLIANLHFANGV 252 (337)
Q Consensus 186 ~~~--------~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~-----~~~~~~~~p~gi 252 (337)
-.. ..-...+.+++.++|...++-.... .....++.++...+... .+.......+.+
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK----------GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS----------SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC----------cceeEEeecccccceecceeeeeecCCCCCeEeE
Confidence 111 0112356788888887555433211 00113444444333321 122334456789
Q ss_pred EEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEecCC
Q psy4771 253 ELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 253 a~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
+++|||+.|..+. ..+.|..+++...+ ....+..+-.+....+++.+||++.++....
T Consensus 276 ~~Spdg~~lasgs-~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 276 DVDMKGELAVLAS-NDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EECTTSCEEEEEE-TTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred EECCCCCceEEEc-CCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 9999998665554 45788888875321 1222222223345789999999977765443
No 158
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.15 E-value=0.00027 Score=64.91 Aligned_cols=182 Identities=12% Similarity=0.069 Sum_probs=108.9
Q ss_pred cEEEe-eCCe-EEEE--ecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCC
Q psy4771 66 EAVVK-HKGD-LYMG--VDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g~-ly~d--~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~ 141 (337)
..+++ .+|. +.+. ..++.|..|+..+...+..+. ..+...+++|.|+|+++++-...++.+++..+
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~----------~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~ 206 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE----------TRGEVKDLHFSTDGKVVAYITGSSLEVISTVT 206 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE----------CSSCCCEEEECTTSSEEEEECSSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC----------CCCceEEEEEccCCceEEeccceeEEEEEecc
Confidence 35666 4554 4433 356778788874443333331 12346799999999887776667788888776
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcc---cc-c----ceeeecc-----------ccCCCCCCCCccEEEcCC
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---QT-E----QLISMDT-----------EIDGAKPQIPNSVTVDSD 202 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~~-~----~v~~~~~-----------~~~~~~~~~pn~v~vd~~ 202 (337)
++....... .+. ...-..++++++|+.+ .. + .+...+. .+.+ .....+.++++||
T Consensus 207 ~~~~~~~~~----~~~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spd 280 (365)
T 4h5i_A 207 GSCIARKTD----FDK-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMK 280 (365)
T ss_dssp CCEEEEECC----CCT-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTT
T ss_pred Ccceeeeec----CCC-CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCC
Confidence 654332211 110 0012457788888876 11 1 1111110 0111 1234678899999
Q ss_pred CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEE-Eecc-ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 203 GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKV-LIAN-LHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 203 G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~-~~~~-~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
|++.++-.. +|.|..+|..+++... +..+ -...++++|+|||+ ++++-+..+.|.++++..
T Consensus 281 g~~lasgs~--------------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 281 GELAVLASN--------------DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEET--------------TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCT
T ss_pred CCceEEEcC--------------CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 986654432 4588888988887543 3333 44568999999997 555666678999999853
No 159
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.14 E-value=3.4e-05 Score=77.44 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=64.2
Q ss_pred cceEEECCCCc-EEEEECCCcEEEEEcCCC---eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 114 PLGIKFDKNGA-LHVADAYFGLYKVNVTTG---QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 114 P~Gl~~d~~G~-lyVad~~~gv~~vd~~~g---~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
...+++++||+ |+++. ...|+.+|.+++ +...+..
T Consensus 111 v~~~~~SpDg~~l~~~~-~~~i~~~d~~~~~~~~~~~l~~---------------------------------------- 149 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPL-GGELYLYDLKQEGKAAVRQLTH---------------------------------------- 149 (741)
T ss_dssp SCCCEECTTSSEEEEEE-TTEEEEEESSSCSTTSCCBCCC----------------------------------------
T ss_pred cceeEECCCCCEEEEEe-CCcEEEEECCCCCcceEEEccc----------------------------------------
Confidence 46899999995 55554 355888888776 4433321
Q ss_pred CCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecccc-----------------ceee
Q psy4771 190 KPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLH-----------------FANG 251 (337)
Q Consensus 190 ~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~-----------------~p~g 251 (337)
.......++++|||+ |+++.. +.|+.+|.++++...+..... .+.+
T Consensus 150 ~~~~~~~~~~SPDG~~la~~~~----------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 213 (741)
T 2ecf_A 150 GEGFATDAKLSPKGGFVSFIRG----------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTG 213 (741)
T ss_dssp SSSCEEEEEECTTSSEEEEEET----------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCS
T ss_pred CCcccccccCCCCCCEEEEEeC----------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccc
Confidence 112367889999997 555432 268888887776655433221 1578
Q ss_pred EEEccCCCEEEEEeC
Q psy4771 252 VELSADESFVIVAET 266 (337)
Q Consensus 252 ia~~~dg~~lyva~~ 266 (337)
++++|||++|+++..
T Consensus 214 ~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 214 YWWAPDDSAIAYARI 228 (741)
T ss_dssp EEECTTSSCEEEEEE
T ss_pred eEECCCCCEEEEEEE
Confidence 999999998888754
No 160
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00019 Score=67.73 Aligned_cols=219 Identities=13% Similarity=0.067 Sum_probs=121.0
Q ss_pred ccEEEe-eCC-eEE-EEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCcEEEEE
Q psy4771 65 PEAVVK-HKG-DLY-MGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFGLYKVN 138 (337)
Q Consensus 65 P~~i~~-~~g-~ly-~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~gv~~vd 138 (337)
..++++ .++ .|+ +...++.|..|+.. ....+..+... .....+.+++++++|+ |++++....++.++
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-------CFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-------ECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-------cCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 356666 344 554 77788888777643 22212111100 1124578999999995 55555434488888
Q ss_pred cCCCeEEE-EeccccccCCCCCCCCCceeeCCC---CCcc----cccceeeecccc-------CCCCCCCCccEEEcCCC
Q psy4771 139 VTTGQTEQ-LISMDTEIDGAKPQIPNSVTVDSD---GQTG----QTEQLISMDTEI-------DGAKPQIPNSVTVDSDG 203 (337)
Q Consensus 139 ~~~g~~~~-l~~~~~~~~g~~~~~P~~v~~~~~---g~~~----~~~~v~~~~~~~-------~~~~~~~pn~v~vd~~G 203 (337)
..+++... .........+ ....++++++ |+++ .++.|...+... ....-...+.+++. +|
T Consensus 178 ~~~~~~~~~~~~~~~~h~~----~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVS----MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp TTSCCCSSCCCCCSEECSS----CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred cCCcccccccceeeecccC----ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC
Confidence 76554321 0000000111 1345777887 7666 223333333110 00112345778888 77
Q ss_pred cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--------------------------ccceeeEEEccC
Q psy4771 204 MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--------------------------LHFANGVELSAD 257 (337)
Q Consensus 204 ~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--------------------------~~~p~gia~~~d 257 (337)
.++++-. .+|.|..+|..+++....... -....+++++++
T Consensus 253 ~~l~s~~--------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 253 YLLLSAG--------------GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp TEEEEEE--------------SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CEEEEEe--------------CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 7554443 245788888777764332221 123468999999
Q ss_pred CCEEEEEeCCCCEEEEEEe--eCC-CCCceeeeecCCCCCCCceeECCCCCEEEEecC
Q psy4771 258 ESFVIVAETMSSRVHRYYL--KGP-KQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 258 g~~lyva~~~~~~I~~~~~--~g~-~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
++.|+++....+.|..+++ ... .......+.. ++.+..++++++ .+|++...
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~--~~~v~~~~~~~~-~~~v~~~~ 373 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF--PYNVISLSAHND-EFQVTLDN 373 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC--SSCEEEEEEETT-EEEEEECC
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEecc--CCceEEEEecCC-cEEEEEec
Confidence 9999999877889999998 221 1122222222 255788899884 57777654
No 161
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.11 E-value=0.00033 Score=64.14 Aligned_cols=214 Identities=13% Similarity=0.025 Sum_probs=116.8
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeCCceeEE--EecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSGGKLVPV--VKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
.++++ .++.+.+...+|.|..|+..+.... ..+.. .........+++.++|+.+++-...+ |...|..+
T Consensus 98 ~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~-------~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 98 TDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAK-------YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp EEEEEETTTEEEEEETTSCEEEC--------CCCCEEE-------CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeecc-------CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 35566 5677777778888877764221111 00000 01123467899999997666544444 88889888
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCc-c----cccceeeeccccCC--------CCCCCCccEEEcCCC-cEEE
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQT-G----QTEQLISMDTEIDG--------AKPQIPNSVTVDSDG-MVYW 207 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~-~----~~~~v~~~~~~~~~--------~~~~~pn~v~vd~~G-~lyv 207 (337)
++....... ..+ .-..+++.++++. + .++.|...+..... ..-..+..+++.|++ .+++
T Consensus 171 ~~~~~~~~~---h~~----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 171 KAVLKSYNA---HSS----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TEEEEEECC---CSS----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred CcEEEEEcC---CCC----CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 775544321 111 1234677777653 2 22334333311100 011235677888764 4443
Q ss_pred EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc-ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceee
Q psy4771 208 SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN-LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEV 286 (337)
Q Consensus 208 td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~ 286 (337)
+-. .+|.|..+|..+++......+ -..-+.++++|+++.++++-...+.|..++++.. +...
T Consensus 244 ~g~--------------~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---~~~~ 306 (357)
T 4g56_B 244 CGD--------------ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---EVFR 306 (357)
T ss_dssp EEE--------------SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---EEEE
T ss_pred Eee--------------cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---cEeE
Confidence 322 245788888777654433333 3445889999998766666656678888886532 1111
Q ss_pred eecCCCCCCCceeECC-CCCEEEEec
Q psy4771 287 FIDGLPGLPDNVKRDS-KGNFLVSLV 311 (337)
Q Consensus 287 ~~~~~~g~Pdgi~~d~-dG~l~va~~ 311 (337)
... ..+....+++.+ +|.+.++..
T Consensus 307 ~~~-H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 307 DLS-HRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp ECC-CSSCEEEEEECSSSTTEEEEEE
T ss_pred ECC-CCCCEEEEEEeCCCCCEEEEEc
Confidence 111 223456788886 677665543
No 162
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.11 E-value=5.7e-05 Score=68.11 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=94.3
Q ss_pred ccEEEeeCCeEE-EEecC-------------cEEEEEeCC-ce-eEEEecCccccCccccCccCCcceEEECCCC-cEEE
Q psy4771 65 PEAVVKHKGDLY-MGVDG-------------GHILKLSGG-KL-VPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHV 127 (337)
Q Consensus 65 P~~i~~~~g~ly-~d~~~-------------g~I~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyV 127 (337)
+..+.+.++.|| ++..+ +.|++++.. .. +.+. . -.+..+.++| .||+
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~---------------~-~~~~~~s~~g~~Iy~ 120 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD---------------P-DPCIYASLIGNYIYY 120 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE---------------C-SCEEEEEEETTEEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee---------------c-CCccEEEEeCCEEEE
Confidence 445556677777 76653 578898863 22 2221 0 1123444454 8999
Q ss_pred EE---CCC-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---c--ccceeeeccccCCC--CCCCCcc
Q psy4771 128 AD---AYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---Q--TEQLISMDTEIDGA--KPQIPNS 196 (337)
Q Consensus 128 ad---~~~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~--~~~v~~~~~~~~~~--~~~~pn~ 196 (337)
++ ... .|++++.++...+++.... . .+++.+|+.+ . ...|..+......+ -...+..
T Consensus 121 ~~~~~~~~~~Iy~~~~dGs~~~~lt~~~----~--------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~ 188 (302)
T 3s25_A 121 LHYDTQTATSLYRIRIDGEEKKKIKNHY----L--------FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY 188 (302)
T ss_dssp EEESSSSCEEEEEEETTSCCCEEEESSC----C--------CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE
T ss_pred EeecCCCCceEEEEECCCCCeEEEeCCC----c--------eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc
Confidence 98 333 4999999877777776420 0 1234444444 1 12333332110000 0112233
Q ss_pred EEEcCCC-cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEE-eCCCCEEEEE
Q psy4771 197 VTVDSDG-MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVA-ETMSSRVHRY 274 (337)
Q Consensus 197 v~vd~~G-~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva-~~~~~~I~~~ 274 (337)
..+.|+| .||+++.... ..|++.+.+++..+++.. -.-..++++++.||++ +.....|.++
T Consensus 189 ~~~~P~g~~iy~t~~~~~-------------~~I~~~~ldG~~~~~Lt~----~~~~~~~~~g~~Iy~~~~~~~~~i~~~ 251 (302)
T 3s25_A 189 KPVVLDDTNVYYMDVNRD-------------NAIVHVNINNPNPVVLTE----ANIEHYNVYGSLIFYQRGGDNPALCVV 251 (302)
T ss_dssp EEEEEETTEEEEEEGGGT-------------TEEEEECSSSCCCEECSC----SCEEEEEEETTEEEEEECSSSCEEEEE
T ss_pred ceeeecCCEEEEEEcCCC-------------cEEEEEECCCCCeEEEeC----CCcceEEECCCEEEEEECCCCcEEEEE
Confidence 4566544 4777776421 378888887766555432 2335678888888876 5566778888
Q ss_pred EeeCC
Q psy4771 275 YLKGP 279 (337)
Q Consensus 275 ~~~g~ 279 (337)
+++|.
T Consensus 252 ~~DG~ 256 (302)
T 3s25_A 252 KNDGT 256 (302)
T ss_dssp ETTSC
T ss_pred ECCCC
Confidence 87765
No 163
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.11 E-value=0.00029 Score=64.36 Aligned_cols=183 Identities=10% Similarity=0.040 Sum_probs=106.3
Q ss_pred EEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCC-cEEEEEcCCC
Q psy4771 67 AVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYF-GLYKVNVTTG 142 (337)
Q Consensus 67 ~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~-gv~~vd~~~g 142 (337)
++++ .++ .|.+...++.|..|+..+.+.+..+. ........+++.+++ .++++-... .|...|..++
T Consensus 132 ~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~---------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR---------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc---------CcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 4455 344 44477777777777753333332221 122446789999988 676664444 4888888776
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCC-Ccc---cc-cceeeeccccCCC-------CCCCCccEEEcCCCc-EEEEc
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDG-QTG---QT-EQLISMDTEIDGA-------KPQIPNSVTVDSDGM-VYWSD 209 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g-~~~---~~-~~v~~~~~~~~~~-------~~~~pn~v~vd~~G~-lyvtd 209 (337)
+....... ...+. ....+++.+++ +++ .. +.|...+.+ .+. .-...+.+++.++|. +.++-
T Consensus 203 ~~~~~~~~--~~~~~---~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 203 KPASQIGC--SAPGY---LPTSLAWHPQQSEVFVFGDENGTVSLVDTK-STSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp SCEEECC------CC---CEEEEEECSSCTTEEEEEETTSEEEEEESC-C--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ceeeeeec--ceeec---cceeeeecCCCCcceEEeccCCcEEEEECC-CCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 54333211 11111 23456677644 443 22 333333311 111 123457788888774 43333
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+ .+|.|..+|..+++...+...-...++++++|+++.|+++-...++|..+++..
T Consensus 277 s--------------~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 277 S--------------EDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp E--------------TTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred e--------------CCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 2 246888889888877655555556789999999988887776778888888653
No 164
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.11 E-value=0.0001 Score=73.50 Aligned_cols=138 Identities=13% Similarity=0.065 Sum_probs=87.0
Q ss_pred CcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 113 RPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 113 ~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
.+..+++++++.++++. ...++.+|.++++...+... ..
T Consensus 83 ~v~~~~~spd~~~~~~~-~~~i~~~d~~~~~~~~l~~~----------------------------------------~~ 121 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT-QGGLVGFDMLARKVTYLFDT----------------------------------------NE 121 (706)
T ss_dssp CCEEEEETTTTEEEEEE-TTEEEEEETTTTEEEEEECC----------------------------------------TT
T ss_pred CceeEEECCCCeEEEEE-CCEEEEEECCCCceEEccCC----------------------------------------cc
Confidence 47789999997666664 35699999988877666431 12
Q ss_pred CCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCC-----CeeEEEecccc---------------ceee
Q psy4771 193 IPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT-----KKNKVLIANLH---------------FANG 251 (337)
Q Consensus 193 ~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~-----~~~~~~~~~~~---------------~p~g 251 (337)
...+++++|||+ |.++.. +.|+.+|..+ ++...+..... .+.+
T Consensus 122 ~~~~~~~SpdG~~la~~~~----------------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~ 185 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYVRN----------------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKG 185 (706)
T ss_dssp CCTTCEECTTSSEEEEEET----------------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCS
T ss_pred cccCCcCCCCCCEEEEEEC----------------CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCce
Confidence 356788999986 444321 3677777766 65544332221 2589
Q ss_pred EEEccCCCEEEEEeC--------------------------------CCCEEEEEEeeCCCCCceeeeec--CCCCCCCc
Q psy4771 252 VELSADESFVIVAET--------------------------------MSSRVHRYYLKGPKQGKSEVFID--GLPGLPDN 297 (337)
Q Consensus 252 ia~~~dg~~lyva~~--------------------------------~~~~I~~~~~~g~~~~~~~~~~~--~~~g~Pdg 297 (337)
++++|||++|+++.. ...+|+++++++++ ...... .....+..
T Consensus 186 ~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 186 TFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK---TVYLQTGEPKEKFLTN 262 (706)
T ss_dssp EEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE---EEECCCCSCTTCEEEE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc---eEeeccCCCCceeEee
Confidence 999999999988752 23567778775432 111111 11123456
Q ss_pred eeECCCCC-EEEEe
Q psy4771 298 VKRDSKGN-FLVSL 310 (337)
Q Consensus 298 i~~d~dG~-l~va~ 310 (337)
+++.+||+ ++++.
T Consensus 263 ~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 263 LSWSPDENILYVAE 276 (706)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 88899997 55544
No 165
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.10 E-value=0.0014 Score=58.62 Aligned_cols=210 Identities=10% Similarity=0.085 Sum_probs=117.0
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g 142 (337)
.++++ .++ .+.+...++.|..|+..+.+.+..+. ........+++++++.++++-...+ |...|.++.
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV---------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc---------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 34555 344 56688899999999864333332221 1224467899999997766654444 777888766
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCC------CCcc----cccceeeecc-------ccCCCCCCCCccEEEcCCCcE
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSD------GQTG----QTEQLISMDT-------EIDGAKPQIPNSVTVDSDGMV 205 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~------g~~~----~~~~v~~~~~-------~~~~~~~~~pn~v~vd~~G~l 205 (337)
.+..+... .+. -..+.+.+. +..+ .++.|...+. .+.+ .-...+.++++++|++
T Consensus 140 ~~~~~~~h----~~~----v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 140 CLATLLGH----NDW----VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTL 210 (319)
T ss_dssp EEEEECCC----SSC----EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSE
T ss_pred eEEEEecc----CCc----EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCE
Confidence 55544321 100 112233332 2222 1122222211 1111 1234678888898876
Q ss_pred EEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCcee
Q psy4771 206 YWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSE 285 (337)
Q Consensus 206 yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~ 285 (337)
.++-. .+|.|..+|..+++.............++++||+..|..+.. ..|..++++.... ..
T Consensus 211 l~s~~--------------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~~~~--~~ 272 (319)
T 3frx_A 211 IASAG--------------KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA--TGIKVFSLDPQYL--VD 272 (319)
T ss_dssp EEEEE--------------TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET--TEEEEEEETTEEE--EE
T ss_pred EEEEe--------------CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeCcCee--ee
Confidence 55443 246888888887765444444456788999999988777764 4677777653211 01
Q ss_pred eeecCC-------CCCCCceeECCCCCEEEEec
Q psy4771 286 VFIDGL-------PGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 286 ~~~~~~-------~g~Pdgi~~d~dG~l~va~~ 311 (337)
.+.... ......+++.+||++.++..
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 111111 11234688999998665543
No 166
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.05 E-value=0.0015 Score=57.93 Aligned_cols=182 Identities=13% Similarity=0.062 Sum_probs=107.8
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
-.++++ .++ .+.+...++.|..|+.........+. ........++++++|+++++-...+ |...|.++
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---------GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc---------cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 345556 344 45588889988888863222222221 1223467899999997666654444 77788876
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
++...... + .-.....+++.++|++.++-..
T Consensus 97 ~~~~~~~~------~---------------------------------~~~~v~~~~~~~~~~~l~s~~~---------- 127 (312)
T 4ery_A 97 GKCLKTLK------G---------------------------------HSNYVFCCNFNPQSNLIVSGSF---------- 127 (312)
T ss_dssp CCEEEEEE------C---------------------------------CSSCEEEEEECSSSSEEEEEET----------
T ss_pred CcEEEEEc------C---------------------------------CCCCEEEEEEcCCCCEEEEEeC----------
Confidence 65433322 1 1123567888888876554432
Q ss_pred eecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
+|.|..+|..+++...... .-.....++++++++.++.+. ..+.|..+++...+ ....+..........+++
T Consensus 128 ----d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~ 200 (312)
T 4ery_A 128 ----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKF 200 (312)
T ss_dssp ----TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCC--EEEEECCSSCCCEEEEEE
T ss_pred ----CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCc--eeeEEeccCCCceEEEEE
Confidence 4578888887765433332 334457899999998666554 45788888875321 112222211122345788
Q ss_pred CCCCCEEEEec
Q psy4771 301 DSKGNFLVSLV 311 (337)
Q Consensus 301 d~dG~l~va~~ 311 (337)
+++|++.++..
T Consensus 201 ~~~~~~l~~~~ 211 (312)
T 4ery_A 201 SPNGKYILAAT 211 (312)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEc
Confidence 88887555443
No 167
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.04 E-value=0.00051 Score=62.67 Aligned_cols=177 Identities=11% Similarity=0.011 Sum_probs=105.5
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
.++++ .++.+.+...+|.|..|+. ++......+.. ....+....+++.++|+.+++-...+ |...|.++
T Consensus 86 ~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~-------~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 86 ADLTWVGERGILVASDSGAVELWELDENETLIVSKFCK-------YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEE-------ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccc-------cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 34566 5677778889998888874 33221111100 01224467899999997666644444 88889887
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCceee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFE 220 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~ 220 (337)
++...... | --...+.+++.+++. ++++-..
T Consensus 159 ~~~~~~~~------~---------------------------------h~~~V~~~~~~~~~~~~l~s~s~--------- 190 (344)
T 4gqb_B 159 QVVLSSYR------A---------------------------------HAAQVTCVAASPHKDSVFLSCSE--------- 190 (344)
T ss_dssp TEEEEEEC------C---------------------------------CSSCEEEEEECSSCTTEEEEEET---------
T ss_pred CcEEEEEc------C---------------------------------cCCceEEEEecCCCCCceeeecc---------
Confidence 76544332 1 012357888888774 6655432
Q ss_pred eeecCCccEEEEcCCCCeeEEEec---cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCc
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIA---NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDN 297 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~---~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdg 297 (337)
+|.|..+|..+++...... .......+++++++..++++-...+.|..+++...+. ...+.. .......
T Consensus 191 -----D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~-h~~~v~~ 262 (344)
T 4gqb_B 191 -----DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAV-HSQCVTG 262 (344)
T ss_dssp -----TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEEC-CSSCEEE
T ss_pred -----ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcC-CCCCEEE
Confidence 4578888887776433221 2234678999987766777766778999998864322 122222 1222355
Q ss_pred eeECCCCC
Q psy4771 298 VKRDSKGN 305 (337)
Q Consensus 298 i~~d~dG~ 305 (337)
+++.++|.
T Consensus 263 v~fsp~g~ 270 (344)
T 4gqb_B 263 LVFSPHSV 270 (344)
T ss_dssp EEECSSSS
T ss_pred EEEccCCC
Confidence 66776663
No 168
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.002 Score=59.03 Aligned_cols=218 Identities=12% Similarity=0.077 Sum_probs=120.6
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcE-EEEECCCcEEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGAL-HVADAYFGLYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~l-yVad~~~gv~~vd~~~ 141 (337)
-.++++ .++ .|++...+|.|..|+... ..+..+. .......++++.++|+. +++.....|..+|..+
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWNKTG-ALLNVLN---------FHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEEC---------CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Ceeeecc---------CCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 345556 344 556888899999998522 1122221 12245779999999954 4554434588889887
Q ss_pred CeEEEEeccccccCCC--------CCCCCCceeeCCCCCcc---cccceeeeccccCC------CCCCCCccEEEcCCCc
Q psy4771 142 GQTEQLISMDTEIDGA--------KPQIPNSVTVDSDGQTG---QTEQLISMDTEIDG------AKPQIPNSVTVDSDGM 204 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~--------~~~~P~~v~~~~~g~~~---~~~~v~~~~~~~~~------~~~~~pn~v~vd~~G~ 204 (337)
++.............. .......+++.+++.++ ..+.|...+..... ........++++++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK 260 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence 7655443311100000 00013456666666665 33344444321110 0123356788888876
Q ss_pred EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc
Q psy4771 205 VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK 283 (337)
Q Consensus 205 lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~ 283 (337)
.+++.. .+|.|..+|..+++...... .-.....+++++++ ++++....+.|..+++.... .
T Consensus 261 ~l~~~~--------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--~ 322 (425)
T 1r5m_A 261 LLLSAS--------------DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNT--L 322 (425)
T ss_dssp EEEEEE--------------TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTE--E
T ss_pred EEEEEc--------------CCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCc--E
Confidence 444432 24578888877665433332 34456889999998 44445557899999875321 1
Q ss_pred eeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 284 SEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 284 ~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
...+.. .......++++++|++.++..
T Consensus 323 ~~~~~~-~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 323 LALSIV-DGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEEEC-TTCCEEEEEECTTSSEEEEEE
T ss_pred eEeccc-CCccEEEEEEcCCCCEEEEEE
Confidence 122221 223467888999988555443
No 169
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.99 E-value=0.0043 Score=57.07 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=119.9
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
..++++ .++ .|++...++.|..|+..+...+..+. .......++++.++|+.+++-...+ |..+|..+
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI---------GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE---------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc---------CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 455666 344 56688889999999863322222221 1224567899999996655544444 88889887
Q ss_pred CeEEEEeccccccCCC-----------------CCCCCCceeeCCCCCcc----cccceeeecccc-------CCCCCCC
Q psy4771 142 GQTEQLISMDTEIDGA-----------------KPQIPNSVTVDSDGQTG----QTEQLISMDTEI-------DGAKPQI 193 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~-----------------~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~-------~~~~~~~ 193 (337)
++.............. .......++++++|+++ .++.|...+... .......
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 7655443211000000 00012346667777776 223344333111 1111234
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCe--eEEEeccc-cceeeEEEccCCCEEEEEeCCCC
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK--NKVLIANL-HFANGVELSADESFVIVAETMSS 269 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~--~~~~~~~~-~~p~gia~~~dg~~lyva~~~~~ 269 (337)
...++++++|. +.++-. .+|.|..+|..+++ ...+.... ...+.++ .++++ ++++-...+
T Consensus 293 v~~~~~~~~~~~~l~~g~--------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~l~s~~~d~ 356 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGY--------------ENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGA-LFVSSGFDT 356 (420)
T ss_dssp EEEEEECSSCTTEEEEEE--------------TTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTE-EEEEETTTE
T ss_pred ceeEEEeCCCCCEEEEEe--------------CCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCC-EEEEecCCc
Confidence 66788888876 544433 24688888887653 23333322 2334554 45664 666666778
Q ss_pred EEEEEEeeCCCC-------CceeeeecCCCCCCCceeECCCCC----EEEEec
Q psy4771 270 RVHRYYLKGPKQ-------GKSEVFIDGLPGLPDNVKRDSKGN----FLVSLV 311 (337)
Q Consensus 270 ~I~~~~~~g~~~-------~~~~~~~~~~~g~Pdgi~~d~dG~----l~va~~ 311 (337)
+|..+++..... .....+.. ..+....+++.++|. ++++..
T Consensus 357 ~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 357 SIKLDIISDPESERPAIEFETPTFLVS-NDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEEEEEECCTTCCSCEECTTSCEEECC-SSCCCCEEEEECCSSSSCEEEEEET
T ss_pred cEEEEeccCCCCCccceeccCccEEcc-CCcceEEEEEccCCCCcceEEEEcC
Confidence 899998865211 11112221 233467788888887 555543
No 170
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.0026 Score=57.28 Aligned_cols=215 Identities=13% Similarity=0.104 Sum_probs=111.9
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC--CcEEEEECCCc-EEEEE
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN--GALHVADAYFG-LYKVN 138 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~--G~lyVad~~~g-v~~vd 138 (337)
.++++ .++ .|.+...+|.|..|+. +....+..+. ........+++.++ ++++++-...+ |...|
T Consensus 15 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 15 HDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT---------GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC---------CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec---------CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 45555 344 4557778888888865 2433333331 12244678999866 76555544444 77778
Q ss_pred cCCCeEEEEeccccccCCCCCCCCCceeeCCC--CCcc----cccceeeeccccCC--------CCCCCCccEEEcC---
Q psy4771 139 VTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GQTG----QTEQLISMDTEIDG--------AKPQIPNSVTVDS--- 201 (337)
Q Consensus 139 ~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~--g~~~----~~~~v~~~~~~~~~--------~~~~~pn~v~vd~--- 201 (337)
..+++...+.... ...+ ....++++++ |+++ .++.|...+..... ......+.+++.+
T Consensus 86 ~~~~~~~~~~~~~-~~~~----~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 86 EENGRWSQIAVHA-VHSA----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EETTEEEEEEEEC-CCSS----CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred cCCCceeEeeeec-CCCc----ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 7777533332210 0111 1345777777 7666 22344433321110 0122345666766
Q ss_pred ----------CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee-----EEEeccccceeeEEEccC---CCEEEE
Q psy4771 202 ----------DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN-----KVLIANLHFANGVELSAD---ESFVIV 263 (337)
Q Consensus 202 ----------~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~-----~~~~~~~~~p~gia~~~d---g~~lyv 263 (337)
++.+.++. ..+|.|..+|..+++. ..+...-.....++++|+ ++ +++
T Consensus 161 ~~~~~~~~~~~~~~l~~~--------------~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~ 225 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTG--------------GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLA 225 (379)
T ss_dssp ---------CTTCEEEEE--------------ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEE
T ss_pred cccccccCCCCCCEEEEE--------------eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEE
Confidence 34433322 2345666666544321 112223345678999999 65 555
Q ss_pred EeCCCCEEEEEEeeCCCCCceeeeec--CCCCCCCceeECCCCCEEEE
Q psy4771 264 AETMSSRVHRYYLKGPKQGKSEVFID--GLPGLPDNVKRDSKGNFLVS 309 (337)
Q Consensus 264 a~~~~~~I~~~~~~g~~~~~~~~~~~--~~~g~Pdgi~~d~dG~l~va 309 (337)
+-...+.|..+++............. ...+....++++++|.+.++
T Consensus 226 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 226 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence 55556788889886532111122221 12233456788888874443
No 171
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.98 E-value=0.0018 Score=59.87 Aligned_cols=148 Identities=17% Similarity=0.110 Sum_probs=90.6
Q ss_pred EEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCe
Q psy4771 67 AVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQ 143 (337)
Q Consensus 67 ~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~ 143 (337)
++++ .++ .+.+...++.|..|+..+...+..+. ........+++.++|+.+++-...+ |...|..+++
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~---------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ---------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc---------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 5566 455 45588889999999874333332221 1223467899999996666544444 7788888776
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCCccCceeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~ 222 (337)
...... . ......+++.+ +|++.++...
T Consensus 199 ~~~~~~----~------------------------------------~~~v~~~~~~~~~~~~l~~~s~----------- 227 (393)
T 1erj_A 199 CSLTLS----I------------------------------------EDGVTTVAVSPGDGKYIAAGSL----------- 227 (393)
T ss_dssp EEEEEE----C------------------------------------SSCEEEEEECSTTCCEEEEEET-----------
T ss_pred eEEEEE----c------------------------------------CCCcEEEEEECCCCCEEEEEcC-----------
Confidence 544332 0 12246677877 6775554432
Q ss_pred ecCCccEEEEcCCCCeeEEEe--------ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLI--------ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~--------~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..+++..... ........+++++||+.|+.+ ...+.|..+++..
T Consensus 228 ---d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 ---DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQN 287 (393)
T ss_dssp ---TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC--
T ss_pred ---CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCC
Confidence 456777777666543222 122346789999999866554 4567888888753
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.95 E-value=0.00091 Score=61.06 Aligned_cols=155 Identities=15% Similarity=0.072 Sum_probs=89.4
Q ss_pred eEEECCCC-cEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCC
Q psy4771 116 GIKFDKNG-ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIP 194 (337)
Q Consensus 116 Gl~~d~~G-~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~p 194 (337)
+.++.++| .|+++.....|+.+|.++++.+.+... .+ . ....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~----~~-------~--------------------------~~~~ 127 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV----PA-------E--------------------------WVGY 127 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC----CT-------T--------------------------EEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec----hh-------h--------------------------cccc
Confidence 67899999 677776555699999998887766531 10 0 0001
Q ss_pred ccEEEcCCCcEEEEcCCC--Cc---cCce--e-eeeecCCccEEEEcCCCCeeEEEeccccceeeEEEcc-CCCEEEEEe
Q psy4771 195 NSVTVDSDGMVYWSDSST--KY---KSGL--F-EGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSA-DESFVIVAE 265 (337)
Q Consensus 195 n~v~vd~~G~lyvtd~~~--~~---~~~~--~-~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~lyva~ 265 (337)
....++++|+..+.-... .+ ..+. . .......+.|+.+|.++++.+.+.........++++| ||+.|+++.
T Consensus 128 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 128 GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEE
Confidence 112346677644321100 00 0000 0 0011234689999999998877776666678899999 998875554
Q ss_pred CC-----CCEEEEEEeeCCCCCceeeeecCCCC-CCCceeECCCCC-E-EEEe
Q psy4771 266 TM-----SSRVHRYYLKGPKQGKSEVFIDGLPG-LPDNVKRDSKGN-F-LVSL 310 (337)
Q Consensus 266 ~~-----~~~I~~~~~~g~~~~~~~~~~~~~~g-~Pdgi~~d~dG~-l-~va~ 310 (337)
.. ..+|+.++.++.. ...+.....+ ....+++.+||+ | |++.
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECCCCCEEEEEec
Confidence 43 4589988876542 2222221111 123467888886 4 4444
No 173
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.95 E-value=0.0027 Score=57.76 Aligned_cols=178 Identities=12% Similarity=0.108 Sum_probs=105.4
Q ss_pred EEEe-e-CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECC--CCcEEEEECCC-cEEEEEcCC
Q psy4771 67 AVVK-H-KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK--NGALHVADAYF-GLYKVNVTT 141 (337)
Q Consensus 67 ~i~~-~-~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~--~G~lyVad~~~-gv~~vd~~~ 141 (337)
++.+ . +..+.+...++.|..|+..+...+..+. ........+.+.+ +|+++++-... .|...|..+
T Consensus 159 ~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 159 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH---------GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---------CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 4445 3 3467788899999999864333332221 1113355677765 46565554444 488889877
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
++...... + .-...+.+++.++|..+++-..
T Consensus 230 ~~~~~~~~------~---------------------------------h~~~v~~v~~~p~~~~l~s~s~---------- 260 (354)
T 2pbi_B 230 GQCVQAFE------T---------------------------------HESDVNSVRYYPSGDAFASGSD---------- 260 (354)
T ss_dssp CCEEEEEC------C---------------------------------CSSCEEEEEECTTSSEEEEEET----------
T ss_pred CcEEEEec------C---------------------------------CCCCeEEEEEeCCCCEEEEEeC----------
Confidence 76443321 1 1224678999999886655433
Q ss_pred eecCCccEEEEcCCCCeeEEEecc---ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCce
Q psy4771 222 LTSGSGRLIQYNPKTKKNKVLIAN---LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNV 298 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi 298 (337)
+|.|..+|..+++....... ......++++++|+.|+++. ..+.|..+++.... ....+. +..+....+
T Consensus 261 ----D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~--~~~~l~-~h~~~v~~l 332 (354)
T 2pbi_B 261 ----DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY-NDYTINVWDVLKGS--RVSILF-GHENRVSTL 332 (354)
T ss_dssp ----TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCS--EEEEEC-CCSSCEEEE
T ss_pred ----CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE-CCCcEEEEECCCCc--eEEEEE-CCCCcEEEE
Confidence 45777777766543333222 22457899999998666554 56788888874321 122222 223345678
Q ss_pred eECCCCCEEEEe
Q psy4771 299 KRDSKGNFLVSL 310 (337)
Q Consensus 299 ~~d~dG~l~va~ 310 (337)
++.++|++.++.
T Consensus 333 ~~spdg~~l~sg 344 (354)
T 2pbi_B 333 RVSPDGTAFCSG 344 (354)
T ss_dssp EECTTSSCEEEE
T ss_pred EECCCCCEEEEE
Confidence 899999855554
No 174
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.95 E-value=0.0081 Score=53.03 Aligned_cols=212 Identities=12% Similarity=0.039 Sum_probs=116.0
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~ 141 (337)
-.++++ .++ .+++...++.|..|+..+...+..+. ........+++.++++++++-... .|..+|.++
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc---------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 345666 344 55688889999999864333232221 122346789999999766664444 488889877
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccc-------cCCCCCCCCccEEEcCCCcEEEEcC
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTE-------IDGAKPQIPNSVTVDSDGMVYWSDS 210 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~-------~~~~~~~~pn~v~vd~~G~lyvtd~ 210 (337)
++....... ..+ .-..++++++|+++ .++.|...+.. +........+.++++++|...++-.
T Consensus 139 ~~~~~~~~~---~~~----~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 139 GKCLKTLPA---HSD----PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp CCEEEEECC---CSS----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEecC---CCC----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 764433321 111 12347778888876 22333333311 0011112345677888877544432
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEecccc---ceeeEEEc-cCCCEEEEEeCCCCEEEEEEeeCCCCCceee
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLH---FANGVELS-ADESFVIVAETMSSRVHRYYLKGPKQGKSEV 286 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~---~p~gia~~-~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~ 286 (337)
.+|.|..+|..+++......+.. ......++ +++ .++++-...+.|..+++..... ...
T Consensus 212 --------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~--~~~ 274 (312)
T 4ery_A 212 --------------LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQTKEI--VQK 274 (312)
T ss_dssp --------------TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTTCCE--EEE
T ss_pred --------------CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCCchh--hhh
Confidence 24578888887776544333221 11223344 445 4666666678899998754321 122
Q ss_pred eecCCCCCCCceeECCCCCEEEEe
Q psy4771 287 FIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 287 ~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
+.. .......++..+++++.++.
T Consensus 275 ~~~-h~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 275 LQG-HTDVVISTACHPTENIIASA 297 (312)
T ss_dssp ECC-CSSCEEEEEECSSSSEEEEE
T ss_pred hhc-cCCcEEEEeecCcCCceEEE
Confidence 221 22234567788888766654
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.94 E-value=8.2e-05 Score=68.16 Aligned_cols=150 Identities=12% Similarity=0.034 Sum_probs=87.3
Q ss_pred CCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEE--------------------
Q psy4771 72 KGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVAD-------------------- 129 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad-------------------- 129 (337)
+..|+....++.|++++. ++...+..... .........++++|+++++-
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~---------~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEENVVYQVPA---------EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCT---------TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred CCEEEEEeCCCeEEEEECCCCcceeeeechh---------hcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 445665556678888886 33332322110 00001123457888776631
Q ss_pred ---CCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCc-
Q psy4771 130 ---AYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGM- 204 (337)
Q Consensus 130 ---~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~- 204 (337)
....|+.+|.++++.+.+... ....++++++| ||+
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~----------------------------------------~~~~~~~~~sp~dg~~ 202 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQE----------------------------------------NQWLGHPIYRPYDDST 202 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEE----------------------------------------SSCEEEEEEETTEEEE
T ss_pred ccCCcceEEEEECCCCceEEeecC----------------------------------------CccccccEECCCCCCE
Confidence 113488899888887776531 12357888999 886
Q ss_pred EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc--cceeeEEEccCCCEE-EEEeCCCC---EEEEEEeeC
Q psy4771 205 VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL--HFANGVELSADESFV-IVAETMSS---RVHRYYLKG 278 (337)
Q Consensus 205 lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~--~~p~gia~~~dg~~l-yva~~~~~---~I~~~~~~g 278 (337)
|.++..... .....+|+.+|.++++.+.+.... ......+++|||+.| |+++.... .|+++++++
T Consensus 203 l~~~~~~~~---------~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 203 VAFCHEGPH---------DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEEECSCT---------TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred EEEEEecCC---------CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 544433210 011348999998877766555433 234567899999977 55554332 388888765
Q ss_pred C
Q psy4771 279 P 279 (337)
Q Consensus 279 ~ 279 (337)
+
T Consensus 274 g 274 (388)
T 3pe7_A 274 L 274 (388)
T ss_dssp C
T ss_pred C
Confidence 4
No 176
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.94 E-value=0.0026 Score=57.00 Aligned_cols=208 Identities=11% Similarity=0.019 Sum_probs=113.0
Q ss_pred eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCC-cEEEEEcCCCeEEEEeccc
Q psy4771 74 DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYF-GLYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 74 ~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-gv~~vd~~~g~~~~l~~~~ 151 (337)
.+++...+|.|..|+..+...+..+. .......++++.+ +++++++-... .|..+|..+++........
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYV---------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEE---------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred EEEEecCCCEEEEEEchhceEeeeec---------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 45588899999999864333332221 1224577999999 77766664444 4888898877655544210
Q ss_pred cccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCC----------------------------------CCCCC
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDG----------------------------------AKPQI 193 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~----------------------------------~~~~~ 193 (337)
....+ ....++++++|+.+ .++.|...+..... ..-..
T Consensus 158 ~~~~~----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 158 EGHRD----EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp TSCSS----CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ccccC----ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 01111 24557788888776 22344433311000 01122
Q ss_pred CccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---------------EEEeccccceeeEEEccC-
Q psy4771 194 PNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---------------KVLIANLHFANGVELSAD- 257 (337)
Q Consensus 194 pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---------------~~~~~~~~~p~gia~~~d- 257 (337)
.+.++++ |++.++.. .+|.|..+|..+++. ..+...-.....++++++
T Consensus 234 v~~~~~~--~~~l~~~~--------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 297 (366)
T 3k26_A 234 VDCVRWL--GDLILSKS--------------CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 297 (366)
T ss_dssp CCEEEEE--TTEEEEEC--------------SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECT
T ss_pred EEEEEEc--CCEEEEEe--------------cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCC
Confidence 3445554 33333322 245666666544321 112222334567899998
Q ss_pred -CCEEEEEeCCCCEEEEEEeeCCCCCc--eeeeecC-CCCCCCceeECCCCCEEEEec
Q psy4771 258 -ESFVIVAETMSSRVHRYYLKGPKQGK--SEVFIDG-LPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 258 -g~~lyva~~~~~~I~~~~~~g~~~~~--~~~~~~~-~~g~Pdgi~~d~dG~l~va~~ 311 (337)
++.|+++ ...+.|..+++....... ...+... ..+....++++++|++.++..
T Consensus 298 ~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 298 WQKMLALG-NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp TSSEEEEE-CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEE-ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence 8766555 556789999987543221 1122221 124467889999998666553
No 177
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.93 E-value=0.00073 Score=61.72 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=43.1
Q ss_pred ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee--c--CCCCCCCceeE--CCCCC--EEEEecCC
Q psy4771 246 LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI--D--GLPGLPDNVKR--DSKGN--FLVSLVCP 313 (337)
Q Consensus 246 ~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~--~--~~~g~Pdgi~~--d~dG~--l~va~~~~ 313 (337)
...|.|++++++..+|||++... .|++|+.+.....+..++. . .+..-+.||++ .++|+ +++++-..
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred CCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 35789999999888999999984 5999997533211222221 1 22234789999 45544 66666433
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.93 E-value=0.00017 Score=71.37 Aligned_cols=181 Identities=12% Similarity=0.046 Sum_probs=99.3
Q ss_pred CCe-EE-EEecCcEEEEEeCC----c-eeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECC----------Cc
Q psy4771 72 KGD-LY-MGVDGGHILKLSGG----K-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAY----------FG 133 (337)
Q Consensus 72 ~g~-ly-~d~~~g~I~~~~~~----~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~----------~g 133 (337)
++. |+ +...+.+|+.++.+ + ...+..... ........++++++|| .|+++... ..
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~-------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA-------VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC-------STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc-------CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 444 44 55557788888753 2 222211000 0012356789999999 45555322 24
Q ss_pred EEEEEcCC------CeEEEEe-ccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-E
Q psy4771 134 LYKVNVTT------GQTEQLI-SMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-V 205 (337)
Q Consensus 134 v~~vd~~~------g~~~~l~-~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-l 205 (337)
|+.+|.++ ++.+.+. . ......++++++||+ |
T Consensus 163 i~~~~~~~~~~~~~~~~~~l~~~----------------------------------------~~~~~~~~~~SpDG~~l 202 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVRELSDD----------------------------------------AHRFVTGPRLSPDGRQA 202 (662)
T ss_dssp EEEEETTSTTTTCGGGSEESSCS----------------------------------------CSSEECCCEECTTSSEE
T ss_pred EEEEECCCCccccCCceeEEEec----------------------------------------CCCcccCceECCCCCEE
Confidence 88888876 5554443 1 112346788999997 6
Q ss_pred EEEcCCCCccCceeeeeecCCccEEEEcCC-CC---eeEEEecc-ccceeeEEEccCCCEEEEEeCCCC--EEEEEEeeC
Q psy4771 206 YWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TK---KNKVLIAN-LHFANGVELSADESFVIVAETMSS--RVHRYYLKG 278 (337)
Q Consensus 206 yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~---~~~~~~~~-~~~p~gia~~~dg~~lyva~~~~~--~I~~~~~~g 278 (337)
+++...... .......|+.+|.+ ++ +.+.+..+ -.....++++|||+ +|++....+ +|+++++++
T Consensus 203 a~~~~~~~~-------~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 203 VWLAWDHPR-------MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp EEEEECTTC-------CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT
T ss_pred EEEECCCCC-------CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC
Confidence 655432110 00012378888887 46 55555544 35678899999999 554443334 788887643
Q ss_pred CCCCceeeeecCCCC------C--CCceeECCCCCEEEEe
Q psy4771 279 PKQGKSEVFIDGLPG------L--PDNVKRDSKGNFLVSL 310 (337)
Q Consensus 279 ~~~~~~~~~~~~~~g------~--Pdgi~~d~dG~l~va~ 310 (337)
++ ...+...... . ...+++.++|+++++.
T Consensus 275 ~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 275 GA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred Cc---eeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 32 2222211000 0 2356777778765554
No 179
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.92 E-value=0.0017 Score=58.82 Aligned_cols=183 Identities=13% Similarity=0.055 Sum_probs=100.3
Q ss_pred EEEe-eCC-eEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 67 AVVK-HKG-DLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 67 ~i~~-~~g-~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
.+++ .++ .|.+...++.|..|+. +.......+. .........++++++|+++++-...+ +...+..+
T Consensus 21 ~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~--------~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS--------EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC--------SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec--------cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 4555 344 4558888898887764 3322111111 11224467899999997666644444 66666655
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
+....+.. ..+ --...+.+++.++|++.++-..
T Consensus 93 ~~~~~~~~----~~~---------------------------------h~~~v~~v~~sp~~~~l~s~s~---------- 125 (345)
T 3fm0_A 93 DDFECVTT----LEG---------------------------------HENEVKSVAWAPSGNLLATCSR---------- 125 (345)
T ss_dssp C-EEEEEE----ECC---------------------------------CSSCEEEEEECTTSSEEEEEET----------
T ss_pred CCeEEEEE----ccC---------------------------------CCCCceEEEEeCCCCEEEEEEC----------
Confidence 54333221 111 1234688999999986655433
Q ss_pred eecCCccEEEEcCCCCee----EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCc
Q psy4771 222 LTSGSGRLIQYNPKTKKN----KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDN 297 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~~~----~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdg 297 (337)
+|.|..+|..++.. ..+.........++++|+++.|..+. ..+.|..++...........+. +..+....
T Consensus 126 ----D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~ 199 (345)
T 3fm0_A 126 ----DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEEDDWVCCATLE-GHESTVWS 199 (345)
T ss_dssp ----TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETTEEEEEEEEC-CCSSCEEE
T ss_pred ----CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCCCEEEEEEec-CCCCceEE
Confidence 34555555444321 12222334567899999997555544 4567888887543111111221 12233567
Q ss_pred eeECCCCCEEEEe
Q psy4771 298 VKRDSKGNFLVSL 310 (337)
Q Consensus 298 i~~d~dG~l~va~ 310 (337)
++++++|++.++.
T Consensus 200 l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 200 LAFDPSGQRLASC 212 (345)
T ss_dssp EEECTTSSEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 7888888755544
No 180
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.91 E-value=7.7e-05 Score=72.86 Aligned_cols=133 Identities=15% Similarity=0.132 Sum_probs=83.8
Q ss_pred ceEEECCCCcEEE-EECC----CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 115 LGIKFDKNGALHV-ADAY----FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 115 ~Gl~~d~~G~lyV-ad~~----~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
..++++|||+.++ +... ..|+.+|.++++.+.+.. .
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~----~----------------------------------- 193 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS----G----------------------------------- 193 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC----S-----------------------------------
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec----C-----------------------------------
Confidence 6889999996555 3222 238999988888776642 1
Q ss_pred CCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc-cceeeEE--------EccCCC
Q psy4771 190 KPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL-HFANGVE--------LSADES 259 (337)
Q Consensus 190 ~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-~~p~gia--------~~~dg~ 259 (337)
....++++++|||+ |+.++.. ....|+++|.++++.+ +..+. ....+++ ++|||
T Consensus 194 -~~~~~~~~~SpDG~~l~~~~~~-------------~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg- 257 (582)
T 3o4h_A 194 -EGSFSSASISPGMKVTAGLETA-------------REARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG- 257 (582)
T ss_dssp -SCEEEEEEECTTSCEEEEEECS-------------SCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-
T ss_pred -CCccccceECCCCCEEEEccCC-------------CeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-
Confidence 12247899999998 5532221 1128999999988876 44332 2334455 99999
Q ss_pred EEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 260 FVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 260 ~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
.+|++....+++..+.+ |. ... ...+....++++ +|+++++..
T Consensus 258 ~~~~~~~~~g~~~l~~~-g~----~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 258 RLAVVARREGRSAVFID-GE----RVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp CEEEEEEETTEEEEEET-TE----EEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred cEEEEEEcCCcEEEEEE-CC----eec---cCCCceEEEEec-CCEEEEEEc
Confidence 67777766778887776 32 111 122334577888 887665543
No 181
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.90 E-value=0.00042 Score=69.42 Aligned_cols=163 Identities=15% Similarity=0.140 Sum_probs=95.0
Q ss_pred CCcceEEECCCCc-EEEEEC-CC-----cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccc-cceeeec
Q psy4771 112 GRPLGIKFDKNGA-LHVADA-YF-----GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQT-EQLISMD 183 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~-~~-----gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~-~~v~~~~ 183 (337)
..+..+++++||+ |+++.. .. .|+.+|.++++...+....... ++|+.++. +...+-.
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 102 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL--------------PGTETLSDEEKARRER 102 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC------------------------------
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc--------------cccccccchhhhhhhh
Confidence 4578999999994 665554 23 4899999988877766421100 01111100 0000000
Q ss_pred cccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCC---eeEEEeccccceeeEEEccCCC
Q psy4771 184 TEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK---KNKVLIANLHFANGVELSADES 259 (337)
Q Consensus 184 ~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~---~~~~~~~~~~~p~gia~~~dg~ 259 (337)
.... ......++++++||+ |+++.. +.|+.+|.+++ +...+...-.....++++|||+
T Consensus 103 ~~~~--~~~~v~~~~~SpDg~~l~~~~~----------------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~ 164 (741)
T 2ecf_A 103 QRIA--AMTGIVDYQWSPDAQRLLFPLG----------------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG 164 (741)
T ss_dssp ------CCEESCCCEECTTSSEEEEEET----------------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS
T ss_pred hhhc--cccCcceeEECCCCCEEEEEeC----------------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC
Confidence 0000 002257899999997 555543 38888998877 6655554445678999999999
Q ss_pred EEEEEeCCCCEEEEEEeeCCCCCceeeeec-CCC---------------CCCCceeECCCCC-EEEEec
Q psy4771 260 FVIVAETMSSRVHRYYLKGPKQGKSEVFID-GLP---------------GLPDNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 260 ~lyva~~~~~~I~~~~~~g~~~~~~~~~~~-~~~---------------g~Pdgi~~d~dG~-l~va~~ 311 (337)
+|+++.. +.|+.++++++. ...+.. +.. +.+.++++.+||+ |+++..
T Consensus 165 ~la~~~~--~~i~~~d~~~g~---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 165 FVSFIRG--RNLWVIDLASGR---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEEEEET--TEEEEEETTTTE---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EEEEEeC--CcEEEEecCCCC---EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 8877763 589999876531 111111 000 0147799999997 555543
No 182
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.88 E-value=0.0063 Score=56.10 Aligned_cols=206 Identities=8% Similarity=0.046 Sum_probs=117.6
Q ss_pred EEeeCCeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCCeE
Q psy4771 68 VVKHKGDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTGQT 144 (337)
Q Consensus 68 i~~~~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g~~ 144 (337)
+...++.+.+...++.|..|+.. +....... ........+++.++|+++++-... .|..+|..+++.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~----------~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAET----------DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK 168 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEEC----------CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeec----------CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE
Confidence 44455667777789999999863 33222211 122446799999999655554334 488888876654
Q ss_pred EEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCCC-------CCCCCccEEEcCCCcEEEEcCCCC
Q psy4771 145 EQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDGA-------KPQIPNSVTVDSDGMVYWSDSSTK 213 (337)
Q Consensus 145 ~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~~-------~~~~pn~v~vd~~G~lyvtd~~~~ 213 (337)
...... ..+. -..++. +++++ .++.|...+...... .-....++++.++|...++-.
T Consensus 169 ~~~~~~---~~~~----v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--- 236 (401)
T 4aez_A 169 LRTMAG---HQAR----VGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG--- 236 (401)
T ss_dssp EEEECC---CSSC----EEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE---
T ss_pred EEEecC---CCCc----eEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe---
Confidence 433321 1110 112333 33333 222333332111110 123457788888877554433
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeC--CCCEEEEEEeeCCCCCceeeeecC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAET--MSSRVHRYYLKGPKQGKSEVFIDG 290 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~--~~~~I~~~~~~g~~~~~~~~~~~~ 290 (337)
.+|.|..+|..+++..... ........++++|+++.++++.. ..+.|..+++..... ...+ .
T Consensus 237 -----------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~-~- 301 (401)
T 4aez_A 237 -----------NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNTV-D- 301 (401)
T ss_dssp -----------TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEEE-E-
T ss_pred -----------CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEEE-e-
Confidence 2458888888776554333 34455689999998887888765 578899999764321 1222 2
Q ss_pred CCCCCCceeECCCCCEEEEe
Q psy4771 291 LPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 291 ~~g~Pdgi~~d~dG~l~va~ 310 (337)
.......+++.++|...++.
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEE
T ss_pred CCCcEEEEEECCCCCeEEEE
Confidence 22346778888888866554
No 183
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.0033 Score=56.64 Aligned_cols=143 Identities=11% Similarity=0.043 Sum_probs=88.0
Q ss_pred CcceEEECC--CCcEEEEECCC-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 113 RPLGIKFDK--NGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 113 ~P~Gl~~d~--~G~lyVad~~~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
....+++++ +|+++++-... .|...|.++++....... .
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~----~---------------------------------- 168 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA----K---------------------------------- 168 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC----C----------------------------------
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec----C----------------------------------
Confidence 466889999 88777654444 488888877765433310 0
Q ss_pred CCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeE--EEec-cccceeeEEEccCCCEEEEEeC
Q psy4771 190 KPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNK--VLIA-NLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 190 ~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~--~~~~-~~~~p~gia~~~dg~~lyva~~ 266 (337)
.....+.++++++|.+.++-.. +|.|..+|..+++.. .+.. .-...+.++++|+|..|..+.
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~--------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~- 233 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSP--------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC- 233 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECT--------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-
T ss_pred CCCceEEEEECCCCCEEEEEcC--------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-
Confidence 1123688999999987665433 457888888777643 2332 345678999999998887777
Q ss_pred CCCEEEEEEeeCCCC-CceeeeecCCCCCCC---ceeECCCCCEEEEec
Q psy4771 267 MSSRVHRYYLKGPKQ-GKSEVFIDGLPGLPD---NVKRDSKGNFLVSLV 311 (337)
Q Consensus 267 ~~~~I~~~~~~g~~~-~~~~~~~~~~~g~Pd---gi~~d~dG~l~va~~ 311 (337)
.+.|..+++..... .....+.. ...+- .++++++|++.++..
T Consensus 234 -~~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGTLAYPTYTI--PEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp -SSBEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred -CCeEEEEEcCCCCcceeeccccc--ccccccceEEEECCCCCEEEEec
Confidence 33899998864321 11111111 11222 399999998766643
No 184
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.85 E-value=0.0035 Score=57.10 Aligned_cols=216 Identities=11% Similarity=-0.006 Sum_probs=119.6
Q ss_pred cEEEeeCCeEEEEecCcEEEEEeCCcee------EEEecCccccCccccCccCCcceEEECCC----C---cEEEEECCC
Q psy4771 66 EAVVKHKGDLYMGVDGGHILKLSGGKLV------PVVKLGKDCYGFKYEQQCGRPLGIKFDKN----G---ALHVADAYF 132 (337)
Q Consensus 66 ~~i~~~~g~ly~d~~~g~I~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~----G---~lyVad~~~ 132 (337)
.++++....+++...+|.|..|+..... .+..+. ........+++.++ | +++++-...
T Consensus 20 ~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 20 FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF---------VHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp EEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE---------CCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred EEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEe---------cCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 4556644677788889999998862211 111111 11234678999988 8 666664444
Q ss_pred c-EEEEEcCCCe------EEEEecccccc-CCCCCCCCCceeeC----CCCCc-c----cccceeeecccc-------C-
Q psy4771 133 G-LYKVNVTTGQ------TEQLISMDTEI-DGAKPQIPNSVTVD----SDGQT-G----QTEQLISMDTEI-------D- 187 (337)
Q Consensus 133 g-v~~vd~~~g~------~~~l~~~~~~~-~g~~~~~P~~v~~~----~~g~~-~----~~~~v~~~~~~~-------~- 187 (337)
+ |..+|..+++ ...+....... .+ ....++++ ++|+. + .++.|...+... .
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKH----SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGS----CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred CCEEEEEccCCcccccccceeecccccccCCC----cEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 4 7667765555 33332210000 01 13457778 88887 5 223333333211 0
Q ss_pred ----------------CCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc------
Q psy4771 188 ----------------GAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN------ 245 (337)
Q Consensus 188 ----------------~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~------ 245 (337)
.........+++.++| ++++... +|.|..+|..+++.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN--------------NGTVQISELSTLRPLYNFESQHSMIN 231 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT--------------TSEEEEEETTTTEEEEEEECCC---C
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC--------------CCcEEEEECCCCceeEEEeccccccc
Confidence 0012346788888888 5544432 46888888877765444443
Q ss_pred -ccceeeEEEccCCCEEEEEeCCC--CEEEEEEeeCCCCCceeeeecC------------CCCCCCceeECCCCCEEEEe
Q psy4771 246 -LHFANGVELSADESFVIVAETMS--SRVHRYYLKGPKQGKSEVFIDG------------LPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 246 -~~~p~gia~~~dg~~lyva~~~~--~~I~~~~~~g~~~~~~~~~~~~------------~~g~Pdgi~~d~dG~l~va~ 310 (337)
-.....++++++++.|+++.... +.|..+++...+ ....+... ..+....++++++|++.++.
T Consensus 232 ~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 232 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred cCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 45678999999998777665321 688888875331 11222110 12335678889888855554
Q ss_pred c
Q psy4771 311 V 311 (337)
Q Consensus 311 ~ 311 (337)
.
T Consensus 310 ~ 310 (397)
T 1sq9_A 310 G 310 (397)
T ss_dssp E
T ss_pred e
Confidence 3
No 185
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.00058 Score=62.64 Aligned_cols=182 Identities=17% Similarity=0.068 Sum_probs=108.7
Q ss_pred ccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCC
Q psy4771 65 PEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTG 142 (337)
Q Consensus 65 P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g 142 (337)
..++.+ .++.+++...++.|..|+......+..+. ........++++++|+++++-... .|..+|..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI---------GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC---------CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec---------cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 344555 56777788889999999863322221111 122346789999999655554444 4777887655
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
+...... + .-.....+++.++| .+++...
T Consensus 280 ~~~~~~~------~---------------------------------~~~~i~~~~~~~~~-~l~~~~~----------- 308 (425)
T 1r5m_A 280 NSQNCFY------G---------------------------------HSQSIVSASWVGDD-KVISCSM----------- 308 (425)
T ss_dssp SCSEEEC------C---------------------------------CSSCEEEEEEETTT-EEEEEET-----------
T ss_pred ccceEec------C---------------------------------CCccEEEEEECCCC-EEEEEeC-----------
Confidence 4322221 0 12235788898888 4433322
Q ss_pred ecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC------------------c
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG------------------K 283 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~------------------~ 283 (337)
+|.|..+|..+++...... .-.....++++++++.|+++. ..+.|..+++...... .
T Consensus 309 ---d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (425)
T 1r5m_A 309 ---DGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF-MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL 384 (425)
T ss_dssp ---TSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE-TTSCEEEEECHHHHC--------------CEECCE
T ss_pred ---CCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE-CCCeEEEEECCCCccceeeeecccccccCcccchh
Confidence 4588888887776544333 344678999999998766665 4578999988632100 1
Q ss_pred eeeeecCCCC-CCCceeECCCCCEEEEe
Q psy4771 284 SEVFIDGLPG-LPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 284 ~~~~~~~~~g-~Pdgi~~d~dG~l~va~ 310 (337)
...+.....+ ....++++++|++.++.
T Consensus 385 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 385 YASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EEEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred hhhhcCcccCCceEEEEccCCCceEEEE
Confidence 1222221112 46789999999855443
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.83 E-value=0.0003 Score=69.61 Aligned_cols=112 Identities=11% Similarity=0.063 Sum_probs=69.5
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCC------CeeEEEe-ccccceeeEEEccCCCEEEEEe
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT------KKNKVLI-ANLHFANGVELSADESFVIVAE 265 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~------~~~~~~~-~~~~~p~gia~~~dg~~lyva~ 265 (337)
..++++++||+ |+++.....- . ........|+++|.++ ++.+.+. .+......++++|||++|+++.
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~-~----~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTG-E----GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECS-S----STTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred ccCcEECCCCCEEEEEEecccC-C----CCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEE
Confidence 56889999997 6555421000 0 0001124799999988 7776666 5556677899999999998766
Q ss_pred CCC-------CEEEEEEeeC-CCCCceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 266 TMS-------SRVHRYYLKG-PKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 266 ~~~-------~~I~~~~~~g-~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
... .+|+.+++++ +.......+..+..+....++..+||+++++.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEE
Confidence 432 5899999873 32223333333222335667788888855544
No 187
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.83 E-value=0.0092 Score=54.67 Aligned_cols=179 Identities=12% Similarity=0.094 Sum_probs=106.1
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-EEEEEcC-CCe-EEEE
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-LYKVNVT-TGQ-TEQL 147 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v~~vd~~-~g~-~~~l 147 (337)
+..+++...++.|..|+..+...+..++... ..........+.+.+ +++++++-...+ |...|.. +++ +..+
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEF----PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCS----SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeeccc----CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE
Confidence 3457788999999999874433333332210 011223456788876 667777755444 7777865 222 2222
Q ss_pred eccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCc
Q psy4771 148 ISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSG 227 (337)
Q Consensus 148 ~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G 227 (337)
. | --...+.+++.++|...++-.. +|
T Consensus 246 ~-------~---------------------------------h~~~v~~v~~~p~~~~l~s~s~--------------D~ 271 (380)
T 3iz6_a 246 H-------G---------------------------------HEGDINSVKFFPDGQRFGTGSD--------------DG 271 (380)
T ss_dssp C-------C---------------------------------CSSCCCEEEECTTSSEEEEECS--------------SS
T ss_pred C-------C---------------------------------cCCCeEEEEEecCCCeEEEEcC--------------CC
Confidence 1 1 1234688999999987666543 45
Q ss_pred cEEEEcCCCCeeEEEecc--------ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee---cCCCCCCC
Q psy4771 228 RLIQYNPKTKKNKVLIAN--------LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI---DGLPGLPD 296 (337)
Q Consensus 228 ~v~~~d~~~~~~~~~~~~--------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~---~~~~g~Pd 296 (337)
.|..+|..+++....... ......++++++|+.|+.+ ...+.|..++....+. ...+. .+..+...
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g-~~dg~i~vwd~~~~~~--~~~~~~~~~~h~~~v~ 348 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG-YSNGDCYVWDTLLAEM--VLNLGTLQNSHEGRIS 348 (380)
T ss_dssp CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE-CTTSCEEEEETTTCCE--EEEECCSCSSCCCCCC
T ss_pred eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEE-ECCCCEEEEECCCCce--EEEEecccCCCCCceE
Confidence 788888777754333321 1235789999999866554 4567888888643211 11111 12234467
Q ss_pred ceeECCCCCEEEEec
Q psy4771 297 NVKRDSKGNFLVSLV 311 (337)
Q Consensus 297 gi~~d~dG~l~va~~ 311 (337)
.+++.++|.+.++..
T Consensus 349 ~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 349 CLGLSSDGSALCTGS 363 (380)
T ss_dssp EEEECSSSSEEEEEC
T ss_pred EEEECCCCCEEEEee
Confidence 889999998666543
No 188
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.83 E-value=0.002 Score=60.30 Aligned_cols=188 Identities=9% Similarity=0.025 Sum_probs=112.7
Q ss_pred ccEEEe-eC-C-eEEEEecCcEEEEEeCCc---e-eEEEecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-EE
Q psy4771 65 PEAVVK-HK-G-DLYMGVDGGHILKLSGGK---L-VPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-LY 135 (337)
Q Consensus 65 P~~i~~-~~-g-~ly~d~~~g~I~~~~~~~---~-~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v~ 135 (337)
..++++ .+ . .|.+...+|.|..|+... . ..+..... . ........++++++ ++.++++....+ |.
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNI-----F-TGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEE-----E-CCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecccee-----e-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 455666 33 3 566888899999998632 1 11100000 0 12234578999999 457777755544 77
Q ss_pred EEEcCCCe----EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcC
Q psy4771 136 KVNVTTGQ----TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 210 (337)
Q Consensus 136 ~vd~~~g~----~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~ 210 (337)
.+|..++. +..+.. .-..++.+++.++|. ++++..
T Consensus 258 i~d~~~~~~~~~~~~~~~----------------------------------------~~~~v~~i~~~p~~~~~l~tg~ 297 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVDA----------------------------------------HTAEVNCLSFNPYSEFILATGS 297 (430)
T ss_dssp EEETTCSCSSSCSEEEEC----------------------------------------CSSCEEEEEECSSCTTEEEEEE
T ss_pred EEECCCCCCCcceeEeec----------------------------------------CCCCeEEEEeCCCCCCEEEEEe
Confidence 78876542 111110 123478899999875 665543
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCC-e-eEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc-----
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTK-K-NKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK----- 283 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~-~-~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~----- 283 (337)
. +|.|..+|..+. + +..+...-.....++++|+++.++++....++|..+++.......
T Consensus 298 ~--------------dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 298 A--------------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp T--------------TSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH
T ss_pred C--------------CCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc
Confidence 3 457777777652 2 333444455678999999998888888888899999986421100
Q ss_pred -----eeeee-cCCCCCCCceeECCCCC-EEEEecC
Q psy4771 284 -----SEVFI-DGLPGLPDNVKRDSKGN-FLVSLVC 312 (337)
Q Consensus 284 -----~~~~~-~~~~g~Pdgi~~d~dG~-l~va~~~ 312 (337)
...+. .+....+..++++++|. +.++...
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~ 399 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE 399 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC
Confidence 11111 11223478899999998 6665543
No 189
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.83 E-value=0.00065 Score=72.20 Aligned_cols=208 Identities=12% Similarity=0.045 Sum_probs=119.9
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCe
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~ 143 (337)
.++++ .++ .+.+...++.|..|+..+....... ........+++.+++.++.+.....|..+|..+++
T Consensus 1007 ~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~----------~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 1076 (1249)
T 3sfz_A 1007 RHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ----------AHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR 1076 (1249)
T ss_dssp CCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB----------CCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe----------cCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc
Confidence 45566 344 5567888888888876332222111 22244678999998888777655558888987776
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCC------CCCCCCccEEEcCCCcEEEEcCCCC
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDG------AKPQIPNSVTVDSDGMVYWSDSSTK 213 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~------~~~~~pn~v~vd~~G~lyvtd~~~~ 213 (337)
....... ..+ ....++++++|+++ .++.|...+..... ......+.++++++|.+.++...
T Consensus 1077 ~~~~~~~---~~~----~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~-- 1147 (1249)
T 3sfz_A 1077 IERDFTC---HQG----TVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDD-- 1147 (1249)
T ss_dssp CCEEEEC---CSS----CCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEET--
T ss_pred eeEEEcc---cCC----cEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeC--
Confidence 4433321 111 14568889999887 22333333311000 01223578889999885554432
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEE----------eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCc
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVL----------IANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGK 283 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~----------~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~ 283 (337)
+|.|..+|..+++.... ........++++++||+.|+.++ +.|..+++..+..
T Consensus 1148 ------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~g~~-- 1210 (1249)
T 3sfz_A 1148 ------------NGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---GYLKWWNVATGDS-- 1210 (1249)
T ss_dssp ------------TSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---SSEEEBCSSSCBC--
T ss_pred ------------CCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC---CeEEEEECCCCce--
Confidence 34566666665543211 11223467899999998777664 6888888754321
Q ss_pred eeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 284 SEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 284 ~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
...+.. ..+....+++.++|...++.
T Consensus 1211 ~~~~~~-~~~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1211 SQTFYT-NGTNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp CCCCCC-SSCCCCCCEECSSSCCEEEE
T ss_pred eeeeec-cCCcccEEEECCCCCEEEEe
Confidence 111211 12335678888888744443
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.82 E-value=0.0024 Score=64.31 Aligned_cols=213 Identities=10% Similarity=-0.034 Sum_probs=117.2
Q ss_pred CccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcC
Q psy4771 64 GPEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~ 140 (337)
...++++ .++ .+.+...+|.|..|+......+..+. ...+...+++++++|+.+++-...+ |..+|..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe---------cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 3456666 344 55688889999999863332222221 1224467999999996555433444 8888887
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---c-ccceeeeccccCC-------CCCCCCccEEEcC-CCcEEEE
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---Q-TEQLISMDTEIDG-------AKPQIPNSVTVDS-DGMVYWS 208 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~-~~~v~~~~~~~~~-------~~~~~pn~v~vd~-~G~lyvt 208 (337)
+++....... ..+ ....++++++|+.+ . ++.|...+..... ..-.....+++++ +|..+++
T Consensus 86 ~~~~~~~~~~---~~~----~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 86 TGEKVVDFEA---HPD----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp TCCEEEEEEC---CSS----CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEec---CCC----CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 7764433321 111 13457788888766 2 2333333211110 0113356777777 5654433
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEE-Eeccc-cceeeEEEcc--CCCEEEEEeCCCCEEEEEEeeCCCCCce
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKV-LIANL-HFANGVELSA--DESFVIVAETMSSRVHRYYLKGPKQGKS 284 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~-~~~~~-~~p~gia~~~--dg~~lyva~~~~~~I~~~~~~g~~~~~~ 284 (337)
.. .+|.|..+|..+++... +.... ...+.+++++ +++.|+++ ...+.|..+++.... ..
T Consensus 159 ~~--------------~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~--~~ 221 (814)
T 3mkq_A 159 GC--------------LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQTKS--CV 221 (814)
T ss_dssp EE--------------TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEE-CTTSEEEEEETTTTE--EE
T ss_pred Ee--------------CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc--EE
Confidence 32 24578888876554322 22222 4567899998 88755554 456789888875321 12
Q ss_pred eeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 285 EVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 285 ~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
..+.. ..+....+++.++|.+.++.
T Consensus 222 ~~~~~-~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 222 ATLEG-HMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp EEEEC-CSSCEEEEEECSSSSEEEEE
T ss_pred EEEcC-CCCCEEEEEEcCCCCEEEEE
Confidence 22221 22334566777777644443
No 191
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.80 E-value=0.0031 Score=57.86 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=92.9
Q ss_pred eEEEEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccc
Q psy4771 74 DLYMGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 74 ~ly~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~ 151 (337)
.+.+...++.|..|+.. ....+..+. ...+....+++.++|+.+++-+..+ |...|..+++.......
T Consensus 220 ~l~sgs~D~~v~~wd~~~~~~~~~~~~---------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~- 289 (380)
T 3iz6_a 220 MFISGSCDTTVRLWDLRITSRAVRTYH---------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR- 289 (380)
T ss_dssp EEEEEETTSCEEEEETTTTCCCCEEEC---------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC-
T ss_pred EEEEEECCCeEEEEECCCCCcceEEEC---------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc-
Confidence 44488888888888752 111111111 1224567999999998777765555 88889887765444321
Q ss_pred cccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEE
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQ 231 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~ 231 (337)
..... .........++++++|++.++-.. +|.|..
T Consensus 290 -~~~~~------------------------------~~~~~~v~~~~~s~~g~~l~~g~~--------------dg~i~v 324 (380)
T 3iz6_a 290 -EPDRN------------------------------DNELPIVTSVAFSISGRLLFAGYS--------------NGDCYV 324 (380)
T ss_dssp -CCSSS------------------------------CCSSCSCSEEEECSSSSEEEEECT--------------TSCEEE
T ss_pred -ccccc------------------------------ccccCceEEEEECCCCCEEEEEEC--------------CCCEEE
Confidence 00000 012334688999999986665543 468888
Q ss_pred EcCCCCeeEEEe-----ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 232 YNPKTKKNKVLI-----ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 232 ~d~~~~~~~~~~-----~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|..+++..... ..-...+.++++|||+.| ++-...+.|..+++.+
T Consensus 325 wd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 325 WDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCS
T ss_pred EECCCCceEEEEecccCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCC
Confidence 887766543322 123346789999999754 5555667888888765
No 192
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.79 E-value=0.0018 Score=59.04 Aligned_cols=169 Identities=15% Similarity=0.156 Sum_probs=97.5
Q ss_pred CccEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCc---cCCcceEEECCCCcEEEEECCC---c-EE
Q psy4771 64 GPEAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQ---CGRPLGIKFDKNGALHVADAYF---G-LY 135 (337)
Q Consensus 64 ~P~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~P~Gl~~d~~G~lyVad~~~---g-v~ 135 (337)
...++++ .++.+++...++.|..|+......+..+... ... ......++++++|+++++-... + |.
T Consensus 188 ~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 188 FATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQ------HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp CCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECC------C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred CceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecc------ccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 3456777 4555558888999999987433333222110 001 3457799999999766654444 4 88
Q ss_pred EEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCcc
Q psy4771 136 KVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYK 215 (337)
Q Consensus 136 ~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~ 215 (337)
.+|..+++....... ... |....+. . ...-.....++++++|.++++...
T Consensus 262 i~d~~~~~~~~~~~~--~~~------~~~~~~~----------------~--~~~~~~v~~~~~~~~~~~l~~~~~---- 311 (397)
T 1sq9_A 262 LYETEFGERIGSLSV--PTH------SSQASLG----------------E--FAHSSWVMSLSFNDSGETLCSAGW---- 311 (397)
T ss_dssp EEETTTCCEEEEECB--C--------------C----------------C--BSBSSCEEEEEECSSSSEEEEEET----
T ss_pred EEECCCCcccceecc--Ccc------ccccccc----------------c--cccCCcEEEEEECCCCCEEEEEeC----
Confidence 888876654433321 000 0000000 0 000124578889998875554432
Q ss_pred CceeeeeecCCccEEEEcCCCCeeEEEec------c----------------ccceeeEEEccCCC---------EEEEE
Q psy4771 216 SGLFEGLTSGSGRLIQYNPKTKKNKVLIA------N----------------LHFANGVELSADES---------FVIVA 264 (337)
Q Consensus 216 ~~~~~~~~~~~G~v~~~d~~~~~~~~~~~------~----------------~~~p~gia~~~dg~---------~lyva 264 (337)
+|.|..+|..+++...... . -...+.++++++++ .++++
T Consensus 312 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s 381 (397)
T 1sq9_A 312 ----------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCC 381 (397)
T ss_dssp ----------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEE
T ss_pred ----------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEE
Confidence 4578888887776544333 2 34568999999983 35555
Q ss_pred eCCCCEEEEEEeeC
Q psy4771 265 ETMSSRVHRYYLKG 278 (337)
Q Consensus 265 ~~~~~~I~~~~~~g 278 (337)
-...+.|..+++++
T Consensus 382 ~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 382 VCLDRSIRWFREAG 395 (397)
T ss_dssp EETTTEEEEEEEEC
T ss_pred ecCCCcEEEEEcCC
Confidence 55678899888864
No 193
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.79 E-value=0.0037 Score=57.69 Aligned_cols=142 Identities=15% Similarity=0.088 Sum_probs=87.8
Q ss_pred cceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 114 PLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 114 P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
...+++.++|+++++-...+ |...|.++++...... + .-.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~------~---------------------------------h~~ 166 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ------G---------------------------------HEQ 166 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------C---------------------------------CSS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc------c---------------------------------CCC
Confidence 46899999997666644444 8888988776544432 1 112
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEcc-CCCEEEEEeCCCCEE
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSA-DESFVIVAETMSSRV 271 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~lyva~~~~~~I 271 (337)
..+.+++.++|...++... +|.|..+|..+++.......-.....+++++ |++.|. +-...+.|
T Consensus 167 ~v~~~~~~p~~~~l~s~s~--------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~s~d~~v 231 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSG--------------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA-AGSLDRAV 231 (393)
T ss_dssp CEEEEEECTTSSEEEEEET--------------TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEE-EEETTSCE
T ss_pred CEEEEEEcCCCCEEEEecC--------------CCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEE-EEcCCCcE
Confidence 3578899999875554432 4578888888877654444445567899998 776554 44456778
Q ss_pred EEEEeeCCCCCceeeee------cCCCCCCCceeECCCCCEEEEec
Q psy4771 272 HRYYLKGPKQGKSEVFI------DGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 272 ~~~~~~g~~~~~~~~~~------~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
..+++..... ...+. .+..+....++++++|.+.++..
T Consensus 232 ~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 232 RVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 8888653221 11110 11112345688888887555443
No 194
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.79 E-value=0.00026 Score=70.67 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=79.2
Q ss_pred cEEEe-eCCe-EEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECC---------
Q psy4771 66 EAVVK-HKGD-LYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAY--------- 131 (337)
Q Consensus 66 ~~i~~-~~g~-ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~--------- 131 (337)
.++++ .+|. +|+ ..+|.|..|+. ++...+.. +.. ........++++|||+ |.++...
T Consensus 20 ~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~-~~~-------~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE-GKK-------IESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC-TTT-------TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred cccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEec-ccc-------ccccccceEEECCCCCEEEEEecCccceeecce
Confidence 33444 3444 445 56788888876 33322211 100 0001367899999995 4444321
Q ss_pred CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcC
Q psy4771 132 FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 210 (337)
Q Consensus 132 ~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~ 210 (337)
..++.+|.++++.+.+... .+ .-..+..++++|||+ |.++..
T Consensus 91 ~~i~~~d~~~~~~~~l~~~----~~---------------------------------~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPP----EV---------------------------------SNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp SEEEEEESSSCCCEECCCT----TC---------------------------------CSCCCSBCCBCSSTTCEEEEET
T ss_pred eeEEEEECCCCceEeccCC----cc---------------------------------ccccccccEECCCCCEEEEEEC
Confidence 2377888887776444321 10 112256788888886 544432
Q ss_pred CCCccCceeeeeecCCccEEEEcCCCCeeEEEecccc-------------------ceeeEEEccCCCEEEEEe
Q psy4771 211 STKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLH-------------------FANGVELSADESFVIVAE 265 (337)
Q Consensus 211 ~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~-------------------~p~gia~~~dg~~lyva~ 265 (337)
+.|+.+|.++++...+..... ...+++++|||++|+++.
T Consensus 134 ----------------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 134 ----------------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp ----------------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ----------------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 267888877776655443211 236899999999887765
No 195
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.78 E-value=0.0018 Score=59.70 Aligned_cols=174 Identities=13% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEecc
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISM 150 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~ 150 (337)
+..+.+...++.|..|+.........+. ........++++++|+++++-...+ |..+|..+++......
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~- 178 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQ---------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI- 178 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETT---------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecc---------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-
Confidence 3445588888989888864333333221 2234577999999996655544444 8888877654322221
Q ss_pred ccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEE
Q psy4771 151 DTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLI 230 (337)
Q Consensus 151 ~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~ 230 (337)
+ .-.....+++.++|+..++-.. +|.|.
T Consensus 179 -----~---------------------------------h~~~v~~~~~~~~~~~l~s~~~--------------d~~v~ 206 (420)
T 3vl1_A 179 -----G---------------------------------HRATVTDIAIIDRGRNVLSASL--------------DGTIR 206 (420)
T ss_dssp -----C---------------------------------CSSCEEEEEEETTTTEEEEEET--------------TSCEE
T ss_pred -----C---------------------------------CCCcEEEEEEcCCCCEEEEEcC--------------CCcEE
Confidence 0 1223678888888875544332 34666
Q ss_pred EEcCCCCeeEEEecc-------------------------ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCcee
Q psy4771 231 QYNPKTKKNKVLIAN-------------------------LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSE 285 (337)
Q Consensus 231 ~~d~~~~~~~~~~~~-------------------------~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~ 285 (337)
.+|..+++....... ......++++++++.|+++. ..+.|..+++.... ...
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~--~~~ 283 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE--QTI 283 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC--EEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc--eeE
Confidence 666666554333221 12334577789997665554 46778888875331 112
Q ss_pred eeecCCCCCCCceeECCCCC-EEEEe
Q psy4771 286 VFIDGLPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 286 ~~~~~~~g~Pdgi~~d~dG~-l~va~ 310 (337)
.+.....+....++++++|. +.++.
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEE
T ss_pred EcccccCCCceeEEEeCCCCCEEEEE
Confidence 22222223456788888887 44443
No 196
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.0012 Score=60.65 Aligned_cols=186 Identities=13% Similarity=0.107 Sum_probs=106.8
Q ss_pred ccEEEe-eC-CeEEEEecCcEEEEEeCCc----eeEEEecCccccCccccCccCCcceEEECCC-CcEEEEECCCc-EEE
Q psy4771 65 PEAVVK-HK-GDLYMGVDGGHILKLSGGK----LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYFG-LYK 136 (337)
Q Consensus 65 P~~i~~-~~-g~ly~d~~~g~I~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~g-v~~ 136 (337)
..++++ .+ ..|.+...+|.|..|+... ...+..+. ........+++.++ ++++++-...+ |..
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS---------NHSSSVKTVKFNAKQDNVLASGGNNGEIFI 140 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC---------CSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc---------CCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence 345666 34 4566888899898887633 22232221 22245678999998 66666644444 777
Q ss_pred EEcCCCe------EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC-CcEEEEc
Q psy4771 137 VNVTTGQ------TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSD 209 (337)
Q Consensus 137 vd~~~g~------~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~-G~lyvtd 209 (337)
+|..+++ ...... ... ........+++.++ +.++++.
T Consensus 141 wd~~~~~~~~~~~~~~~~~---~~~---------------------------------~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPG---QSM---------------------------------SSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCC---CSC---------------------------------CSSCCCCEEEECSSCTTEEEEE
T ss_pred EECCCCccccccccccccc---ccc---------------------------------CCCCCeeEEEeCCCCCcEEEEE
Confidence 7776543 110000 000 01234688999998 5666554
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc-------ccceeeEEEccCCCEEEEEeCCCC---EEEEEEeeCC
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN-------LHFANGVELSADESFVIVAETMSS---RVHRYYLKGP 279 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~-------~~~p~gia~~~dg~~lyva~~~~~---~I~~~~~~g~ 279 (337)
.. +|.|..+|..+++....... -.....++++|++..++++....+ .|..+++...
T Consensus 185 ~~--------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 185 GS--------------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SS--------------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred cC--------------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 33 45788888877765443332 345789999999854555555555 8888988643
Q ss_pred CCCceeeeecCCCCCCCceeECC-CCCEEEEe
Q psy4771 280 KQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSL 310 (337)
Q Consensus 280 ~~~~~~~~~~~~~g~Pdgi~~d~-dG~l~va~ 310 (337)
.. ....+.....+....+++.+ +|++.++.
T Consensus 251 ~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 251 NT-PLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp TS-CSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred CC-CcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 11 11122101223356788887 67644444
No 197
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.78 E-value=0.0011 Score=60.57 Aligned_cols=183 Identities=13% Similarity=0.056 Sum_probs=104.5
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~g-v~~vd~~~ 141 (337)
.++++ .++ .|.+...++.|..|+..+...+..+. ........+++.+++ .++++....+ |...|..+
T Consensus 143 ~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~---------~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 143 KTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN---------AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc---------CCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 45566 444 45588888888888874433333331 122446789998887 4555544444 77778776
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCC-cc----cccceeeeccccC------CCCCCCCccEEEcCCCc-EEEEc
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQ-TG----QTEQLISMDTEID------GAKPQIPNSVTVDSDGM-VYWSD 209 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~-~~----~~~~v~~~~~~~~------~~~~~~pn~v~vd~~G~-lyvtd 209 (337)
++........ ... ..+..+++++++. ++ .++.|...+..-. ...-...+.+++.++|. +.++-
T Consensus 214 ~~~~~~~~~~-~~~----~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 214 PKPATRIDFC-ASD----TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp SSCBCBCCCT-TCC----SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEE
T ss_pred Cceeeeeeec-ccc----ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEE
Confidence 6533222100 001 1245577777654 33 2233433331100 00123457788888764 33332
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEcc-CCCEEEEEeCCCCEEEEEEee
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSA-DESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~lyva~~~~~~I~~~~~~ 277 (337)
..+|.|..+|.++++.......-...++++|+| |++ ++++-...++|..+++.
T Consensus 289 --------------s~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 289 --------------SEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp --------------ETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC
T ss_pred --------------eCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECC
Confidence 234688889988887765555555678999998 676 44555556788888874
No 198
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.78 E-value=0.0038 Score=57.45 Aligned_cols=217 Identities=13% Similarity=0.018 Sum_probs=116.1
Q ss_pred cCccEEEee-CCeEE--EEecCcEEEEEeCCceeEEE-ecCccccCccccCccCCcceEEECC-CCcEEEEECCCc-EEE
Q psy4771 63 HGPEAVVKH-KGDLY--MGVDGGHILKLSGGKLVPVV-KLGKDCYGFKYEQQCGRPLGIKFDK-NGALHVADAYFG-LYK 136 (337)
Q Consensus 63 ~~P~~i~~~-~g~ly--~d~~~g~I~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyVad~~~g-v~~ 136 (337)
|....++.. +...+ +...+|.|..|+..+..... .... . ....+...++++++ +++++++-...+ |..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~-----~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~v 108 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPL-----V-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMV 108 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCC-----B-CCCSSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCce-----E-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 455556662 32222 45678888888753221110 0000 0 12234567999999 776666644444 777
Q ss_pred EEcCCCe--------EEEEeccccccCCCCCCCCCceeeCCCC-Ccc----cccceeeecc-------ccC-CCCCCCCc
Q psy4771 137 VNVTTGQ--------TEQLISMDTEIDGAKPQIPNSVTVDSDG-QTG----QTEQLISMDT-------EID-GAKPQIPN 195 (337)
Q Consensus 137 vd~~~g~--------~~~l~~~~~~~~g~~~~~P~~v~~~~~g-~~~----~~~~v~~~~~-------~~~-~~~~~~pn 195 (337)
.|..++. +..+.. ..+ ....++++++| +++ .++.|...+. .+. ........
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~----h~~----~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEG----HTK----RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY 180 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEEC----CSS----CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE
T ss_pred EEccCCCCccccCCceEEecC----CCC----eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE
Confidence 7776552 222221 111 13446777777 344 2233333321 110 11123457
Q ss_pred cEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-cccc--ceeeEEEccCCCEEEEEe--CCCCE
Q psy4771 196 SVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLH--FANGVELSADESFVIVAE--TMSSR 270 (337)
Q Consensus 196 ~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~--~p~gia~~~dg~~lyva~--~~~~~ 270 (337)
.++++++|..+++-. .+|.|..+|..+++..... .... .+..+++++|++.|+++. ...+.
T Consensus 181 ~~~~~~~~~~l~~~~--------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~ 246 (402)
T 2aq5_A 181 SVDWSRDGALICTSC--------------RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ 246 (402)
T ss_dssp EEEECTTSSCEEEEE--------------TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE
T ss_pred EEEECCCCCEEEEEe--------------cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce
Confidence 888888887444332 2468888998877654433 2222 368899999996555542 45678
Q ss_pred EEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEE
Q psy4771 271 VHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLV 308 (337)
Q Consensus 271 I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~v 308 (337)
|..+++............+ .......++++++|++.+
T Consensus 247 i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 247 VALWDTKHLEEPLSLQELD-TSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp EEEEETTBCSSCSEEEECC-CCSSCEEEEEETTTTEEE
T ss_pred EEEEcCccccCCceEEecc-CCCceeEEEEcCCCCEEE
Confidence 9999886432211111112 223366788888887443
No 199
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.74 E-value=0.011 Score=53.07 Aligned_cols=182 Identities=10% Similarity=0.055 Sum_probs=104.7
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
-.++++ .++ .+.+...++.|..|+......+..+. ........+++.++|+++++-...+ +..++..+
T Consensus 58 v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 58 IYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP---------LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---------CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee---------cCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 345566 444 55688999999999863322222221 1123467899999997766654444 66667654
Q ss_pred Ce--EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCcee
Q psy4771 142 GQ--TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLF 219 (337)
Q Consensus 142 g~--~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~ 219 (337)
+. ...... ..+ .......+.+.+++.+..+.
T Consensus 129 ~~~~~~~~~~----~~~---------------------------------h~~~v~~~~~~~~~~l~s~s---------- 161 (340)
T 1got_B 129 REGNVRVSRE----LAG---------------------------------HTGYLSCCRFLDDNQIVTSS---------- 161 (340)
T ss_dssp CSBSCEEEEE----EEC---------------------------------CSSCEEEEEEEETTEEEEEE----------
T ss_pred CCCcceeEEE----ecC---------------------------------CCccEEEEEECCCCcEEEEE----------
Confidence 32 111110 111 01224556666666544322
Q ss_pred eeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCce
Q psy4771 220 EGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNV 298 (337)
Q Consensus 220 ~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi 298 (337)
.+|.|..+|..+++...... .-.....++++|+++ ++++-...+.|..+++.... ....+.. .......+
T Consensus 162 -----~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~~-h~~~v~~v 232 (340)
T 1got_B 162 -----GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFTG-HESDINAI 232 (340)
T ss_dssp -----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--EEEEECC-CSSCEEEE
T ss_pred -----CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEcC-CcCCEEEE
Confidence 24578888887776544333 334568899999997 45555556788888875321 1222222 23335678
Q ss_pred eECCCCCEEEEec
Q psy4771 299 KRDSKGNFLVSLV 311 (337)
Q Consensus 299 ~~d~dG~l~va~~ 311 (337)
++.++|+++++..
T Consensus 233 ~~~p~~~~l~s~s 245 (340)
T 1got_B 233 CFFPNGNAFATGS 245 (340)
T ss_dssp EECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEc
Confidence 8999988665554
No 200
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.69 E-value=0.0031 Score=58.97 Aligned_cols=190 Identities=12% Similarity=0.126 Sum_probs=109.8
Q ss_pred CccEEEe-eC-C-eEEEEecCcEEEEEeCCc----------eeEEEecCccccCccccCccCCcceEEECCCCc-EEEEE
Q psy4771 64 GPEAVVK-HK-G-DLYMGVDGGHILKLSGGK----------LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVAD 129 (337)
Q Consensus 64 ~P~~i~~-~~-g-~ly~d~~~g~I~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad 129 (337)
.+.++++ .+ + .+++...+|.|..|+..+ ......+ ........++++++++. ++++-
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL---------RGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE---------ECCSSCCCCEEECTTSTTEEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe---------cCCCCCeEEEEeCCCCCCeEEEE
Confidence 4566676 32 3 444788888888887522 1111111 02224467999999986 66665
Q ss_pred CCCc-EEEEEcCCCeE-EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEE
Q psy4771 130 AYFG-LYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVY 206 (337)
Q Consensus 130 ~~~g-v~~vd~~~g~~-~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~ly 206 (337)
...| |..++..++.. ...........+ .-...+++++.+ ++.++
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---------------------------------h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTG---------------------------------HTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECC---------------------------------CSSCEEEEEECSSCTTEE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecC---------------------------------CCCCEeeeEEeCCCCCEE
Confidence 4444 77777764211 000000000000 123468899998 55666
Q ss_pred EEcCCCCccCceeeeeecCCccEEEEcCCCC----eeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC
Q psy4771 207 WSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK----KNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG 282 (337)
Q Consensus 207 vtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~----~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~ 282 (337)
++... +|.|..+|..++ ....+...-..++.++++|+++.++++-...+.|..+++.... .
T Consensus 248 ~s~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~ 312 (430)
T 2xyi_A 248 GSVAD--------------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-L 312 (430)
T ss_dssp EEEET--------------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-S
T ss_pred EEEeC--------------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-C
Confidence 55543 457888887755 2223334445678999999998788777778899999986421 1
Q ss_pred ceeeeecCCCCCCCceeECCCCC-EEEEec
Q psy4771 283 KSEVFIDGLPGLPDNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 283 ~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~ 311 (337)
....+.. ..+....+++.++|. ++++..
T Consensus 313 ~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 313 KLHSFES-HKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp CSEEEEC-CSSCEEEEEECSSCTTEEEEEE
T ss_pred CeEEeec-CCCCEEEEEECCCCCCEEEEEe
Confidence 1222222 233456788888884 555543
No 201
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.68 E-value=0.0081 Score=55.76 Aligned_cols=179 Identities=14% Similarity=0.099 Sum_probs=104.5
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g 142 (337)
.++++ .++ .+.+...++.|..|+..+...+..+. ........+++.++|+.+++-...+ |...|..++
T Consensus 154 ~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~---------~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC---------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc---------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 44555 344 44477888888888764333332221 1224467899999997666654444 777888776
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
....... + .-...+.++++++|.++++...
T Consensus 225 ~~~~~~~------~---------------------------------h~~~v~~~~~~~~g~~l~s~s~----------- 254 (410)
T 1vyh_C 225 YCVKTFT------G---------------------------------HREWVRMVRPNQDGTLIASCSN----------- 254 (410)
T ss_dssp CEEEEEE------C---------------------------------CSSCEEEEEECTTSSEEEEEET-----------
T ss_pred cEEEEEe------C---------------------------------CCccEEEEEECCCCCEEEEEcC-----------
Confidence 5432221 1 1123567888888886655443
Q ss_pred ecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccC--------------------CCEEEEEeCCCCEEEEEEeeCCCC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSAD--------------------ESFVIVAETMSSRVHRYYLKGPKQ 281 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~d--------------------g~~lyva~~~~~~I~~~~~~g~~~ 281 (337)
+|.|..+|..+++..... ..-...+.++++|+ |. ++++-...+.|..+++..+.
T Consensus 255 ---D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~- 329 (410)
T 1vyh_C 255 ---DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM- 329 (410)
T ss_dssp ---TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE-
T ss_pred ---CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc-
Confidence 356777777666543322 33345677888876 43 45555566788888875321
Q ss_pred CceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 282 GKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 282 ~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
....+.. ..+....++++++|.+.++.
T Consensus 330 -~~~~~~~-h~~~v~~v~~~~~g~~l~s~ 356 (410)
T 1vyh_C 330 -CLMTLVG-HDNWVRGVLFHSGGKFILSC 356 (410)
T ss_dssp -EEEEEEC-CSSCEEEEEECSSSSCEEEE
T ss_pred -eEEEEEC-CCCcEEEEEEcCCCCEEEEE
Confidence 1222222 22335678888888744443
No 202
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.67 E-value=0.0093 Score=60.02 Aligned_cols=182 Identities=12% Similarity=-0.009 Sum_probs=103.8
Q ss_pred cEEEe-e-CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcE-EEEECCCcEEEEEcCCC
Q psy4771 66 EAVVK-H-KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGAL-HVADAYFGLYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~-~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~l-yVad~~~gv~~vd~~~g 142 (337)
.++++ . +..|.+...+|.|..|+..+...+..+. ...+....+++.++|.. +++.....|..+|.+++
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE---------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 45555 3 4456688889999999863333232221 12245778999999954 44443344777787655
Q ss_pred -eEEEEeccccccCCCCCCCCCceeeCC-CCCcc----cccceeeecccc-------CCCCCCCCccEEEcC--CCcEEE
Q psy4771 143 -QTEQLISMDTEIDGAKPQIPNSVTVDS-DGQTG----QTEQLISMDTEI-------DGAKPQIPNSVTVDS--DGMVYW 207 (337)
Q Consensus 143 -~~~~l~~~~~~~~g~~~~~P~~v~~~~-~g~~~----~~~~v~~~~~~~-------~~~~~~~pn~v~vd~--~G~lyv 207 (337)
....... ...+ ....+++++ +|+.+ .++.|...+... ........+.+++.+ +|...+
T Consensus 130 ~~~~~~~~---~~~~----~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 130 WALEQTFE---GHEH----FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp SEEEEEEE---CCSS----CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred ceEEEEEc---CCCC----cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 3333222 1111 124466777 66555 223333333111 011114456777777 666444
Q ss_pred EcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 208 SDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 208 td~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+-. .+|.|..+|..+++...... .......++++|+++.|+++. ..+.|..+++..
T Consensus 203 ~~~--------------~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vwd~~~ 259 (814)
T 3mkq_A 203 TAS--------------DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS-EDGTLKIWNSST 259 (814)
T ss_dssp EEC--------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTT
T ss_pred EEe--------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 433 24688888887776543333 345568899999998665554 457788888753
No 203
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0033 Score=55.00 Aligned_cols=142 Identities=10% Similarity=0.082 Sum_probs=90.7
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccc
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~ 151 (337)
+..+++...++.|..|+.++.... +. .........+++.++|.++.+.....|..+|..+++......
T Consensus 155 ~~~l~~~~~d~~i~i~d~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-- 222 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQNDKVIKT--FS--------GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE-- 222 (313)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEE--EC--------SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred CCEEEEEECCCCEEEEecCceEEE--Ee--------ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh--
Confidence 445557778888888885443222 11 112345678999999986666544458888887665443332
Q ss_pred cccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEE
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQ 231 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~ 231 (337)
+ .....+.++++++|.++.+.. +|.|..
T Consensus 223 ----~---------------------------------~~~~i~~~~~~~~~~l~~~~~---------------dg~v~i 250 (313)
T 3odt_A 223 ----G---------------------------------HESFVYCIKLLPNGDIVSCGE---------------DRTVRI 250 (313)
T ss_dssp ----C---------------------------------CSSCEEEEEECTTSCEEEEET---------------TSEEEE
T ss_pred ----c---------------------------------CCceEEEEEEecCCCEEEEec---------------CCEEEE
Confidence 0 123467899999887554332 468888
Q ss_pred EcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC
Q psy4771 232 YNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 232 ~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~ 279 (337)
+|..+++...... .......++++++++ +++ -...+.|..++++..
T Consensus 251 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 251 WSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSSDNLVRIFSQEKS 297 (313)
T ss_dssp ECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EETTSCEEEEESCGG
T ss_pred EECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeCCCcEEEEeCCCC
Confidence 8887776543333 334568899999997 443 445678999988643
No 204
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.66 E-value=0.018 Score=51.74 Aligned_cols=191 Identities=6% Similarity=-0.044 Sum_probs=98.6
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g 142 (337)
.++++ .++ .+.+...++.|..|+..+...+..+. ........+++.++|+.+++-... .|...|..+.
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~---------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV---------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE---------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc---------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 45556 344 55688889999999863332232221 122446789999999665554333 4777787644
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~ 222 (337)
....... ..+ .......+++.+++.-...-. ....+...
T Consensus 151 ~~~~~~~----~~~---------------------------------~~~~v~~~~~~~~~~~~~~~~----~~~~~l~s 189 (343)
T 2xzm_R 151 CKFSSAE----KEN---------------------------------HSDWVSCVRYSPIMKSANKVQ----PFAPYFAS 189 (343)
T ss_dssp EEEECCT----TTS---------------------------------CSSCEEEEEECCCCCSCSCCC----SSCCEEEE
T ss_pred ceeeeec----ccC---------------------------------CCceeeeeeeccccccccccC----CCCCEEEE
Confidence 3322221 001 012234555555431000000 00000111
Q ss_pred ecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 223 TSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
...+|.|..+|........+...-...+.++++|||+.|..+ ...+.|..+++..... ....+.. ......+++++
T Consensus 190 ~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~-~~~~~~~--~~~v~~v~~sp 265 (343)
T 2xzm_R 190 VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATG-GKDKKLLIWDILNLTY-PQREFDA--GSTINQIAFNP 265 (343)
T ss_dssp EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTCEEEEEESSCCSS-CSEEEEC--SSCEEEEEECS
T ss_pred EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEE-cCCCeEEEEECCCCcc-cceeecC--CCcEEEEEECC
Confidence 233567777775433333333344456889999999865544 4567898888742211 1122211 12256788888
Q ss_pred CCCEEEEe
Q psy4771 303 KGNFLVSL 310 (337)
Q Consensus 303 dG~l~va~ 310 (337)
+|.+.++.
T Consensus 266 ~~~~la~~ 273 (343)
T 2xzm_R 266 KLQWVAVG 273 (343)
T ss_dssp SSCEEEEE
T ss_pred CCCEEEEE
Confidence 88755443
No 205
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.66 E-value=0.0034 Score=65.75 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCcceEEECCCCc-EEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 112 GRPLGIKFDKNGA-LHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
..+..++++++|+ |+++.....|+.+|.++++...+... .
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~---------------------------------------~ 419 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS---------------------------------------R 419 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---------------------------------------S
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC---------------------------------------C
Confidence 4567899999995 55555445699999988887766531 1
Q ss_pred CCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC
Q psy4771 191 PQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET 266 (337)
Q Consensus 191 ~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~ 266 (337)
.....++++++||+ |.++.....+. ......+.|+.+|.++++...+.........+++++||+.||++..
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~-----~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGE-----TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSST-----TCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCccceEECCCCCeEEEEecCcccc-----ccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 12347889999997 44443211000 0001235889999988886666666666788999999999988764
No 206
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.66 E-value=0.0022 Score=58.69 Aligned_cols=177 Identities=14% Similarity=0.156 Sum_probs=93.2
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEE--EecCccccCcccc---CccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeE
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPV--VKLGKDCYGFKYE---QQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQT 144 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~--~~~g~~~~~~~~~---~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~ 144 (337)
+.++.+|+...+++++.++..+.+.. ...+........+ .....| .+ .+|.+|++....+++.+|+++|+.
T Consensus 186 ~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p---~~-~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 186 TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTP---VV-VNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp EETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCC---EE-ETTEEEEECTTSCEEEEETTTCCE
T ss_pred EECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCc---EE-ECCEEEEEecCcEEEEEECCCCcE
Confidence 35778888888888888886322222 1111100000000 011112 22 257899987556699999988876
Q ss_pred EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeec
Q psy4771 145 EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTS 224 (337)
Q Consensus 145 ~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~ 224 (337)
..... ......++++ ++++|+++.
T Consensus 262 ~w~~~-----------------------------------------~~~~~~~~~~-~~~l~~~~~-------------- 285 (376)
T 3q7m_A 262 MWKRE-----------------------------------------LGSVNDFIVD-GNRIYLVDQ-------------- 285 (376)
T ss_dssp EEEEC-----------------------------------------CCCEEEEEEE-TTEEEEEET--------------
T ss_pred Eeecc-----------------------------------------CCCCCCceEE-CCEEEEEcC--------------
Confidence 54332 1123345554 568988764
Q ss_pred CCccEEEEcCCCCeeEEEeccc--cceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 225 GSGRLIQYNPKTKKNKVLIANL--HFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~~~--~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
.|.|+.+|+++|+...-...+ ......++. ++.||+... .+.|+.++.+.++...... ... ........+ .
T Consensus 286 -~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~-~~~-~~~~~~~~~-~ 358 (376)
T 3q7m_A 286 -NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQK-VDS-SGFQTEPVA-A 358 (376)
T ss_dssp -TCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEE-CCT-TCBCSCCEE-E
T ss_pred -CCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEe-cCC-CcceeCCEE-E
Confidence 357889998888764333211 122233333 347998875 4689999875432111111 100 111122233 3
Q ss_pred CCCEEEEecCC
Q psy4771 303 KGNFLVSLVCP 313 (337)
Q Consensus 303 dG~l~va~~~~ 313 (337)
+|++|++...+
T Consensus 359 ~~~l~v~~~~G 369 (376)
T 3q7m_A 359 DGKLLIQAKDG 369 (376)
T ss_dssp TTEEEEEBTTS
T ss_pred CCEEEEEeCCC
Confidence 67899887543
No 207
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.65 E-value=0.0011 Score=69.48 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=89.7
Q ss_pred CcceEEECCCC-cEEEEECCCcEE-EEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 113 RPLGIKFDKNG-ALHVADAYFGLY-KVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 113 ~P~Gl~~d~~G-~lyVad~~~gv~-~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
....+++. +| .|+++.....++ .++.++++...+.. .
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~----------------------------------------~ 377 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEE----------------------------------------N 377 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCC----------------------------------------C
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecC----------------------------------------C
Confidence 46678888 87 565554434588 88888776554431 1
Q ss_pred CCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc-cceeeEEEccCCCEEEEEeCC-
Q psy4771 191 PQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL-HFANGVELSADESFVIVAETM- 267 (337)
Q Consensus 191 ~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-~~p~gia~~~dg~~lyva~~~- 267 (337)
...+..+++++||+ |+++.. .+.|+.+|.++++...+..+. .....++++|||++|.++...
T Consensus 378 ~~~~~~~~~SpDG~~la~~~~---------------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 378 LGNVFAMGVDRNGKFAVVAND---------------RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp CCSEEEEEECTTSSEEEEEET---------------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred ccceeeeEECCCCCEEEEECC---------------CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCc
Confidence 23467899999997 444432 248899999888877666333 334789999999988766542
Q ss_pred --------CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC-EEEEec
Q psy4771 268 --------SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLV 311 (337)
Q Consensus 268 --------~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~-l~va~~ 311 (337)
.+.|+.+++++. ....+... ......+++++||+ +|.+..
T Consensus 443 ~~~~~~~~~~~i~l~d~~~g---~~~~l~~~-~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 443 HGETDGYVMQAIHVYDMEGR---KIFAATTE-NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SSTTCSCCEEEEEEEETTTT---EEEECSCS-SSBEEEEEECTTSCEEEEEES
T ss_pred cccccCCCCCeEEEEECCCC---cEEEeeCC-CcccCCceEcCCCCEEEEEec
Confidence 257888887643 22222221 12245678999997 555543
No 208
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.65 E-value=0.0063 Score=53.86 Aligned_cols=151 Identities=13% Similarity=0.042 Sum_probs=92.0
Q ss_pred ccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 65 PEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 65 P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
-.++++ .++ .|.+...+|.|..|+..+...+..+. ........+++.++|+++++-...+ |...|.++
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee---------ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 346666 344 56688899999999874333332221 1112346788999987666644444 88888877
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEG 221 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~ 221 (337)
++...... + --...+.+++.+++.+.++-..
T Consensus 87 ~~~~~~~~------~---------------------------------h~~~v~~~~~~~~~~~l~sgs~---------- 117 (304)
T 2ynn_A 87 GEKVVDFE------A---------------------------------HPDYIRSIAVHPTKPYVLSGSD---------- 117 (304)
T ss_dssp CCEEEEEE------C---------------------------------CSSCEEEEEECSSSSEEEEEET----------
T ss_pred CcEEEEEe------C---------------------------------CCCcEEEEEEcCCCCEEEEECC----------
Confidence 65433221 1 1123678999999886655433
Q ss_pred eecCCccEEEEcCCCC-eeEE-EeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 222 LTSGSGRLIQYNPKTK-KNKV-LIANLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 222 ~~~~~G~v~~~d~~~~-~~~~-~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+|.|..+|..++ .... +...-.....++++|++..++++-...+.|..+++.
T Consensus 118 ----D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 118 ----DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp ----TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred ----CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 456777776554 3322 223344568899998433355555567889988874
No 209
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.65 E-value=0.0073 Score=53.96 Aligned_cols=162 Identities=10% Similarity=0.011 Sum_probs=94.5
Q ss_pred ccEEEe-e-CCeEEEEecCcEEEEEeCCc-eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEEEcC
Q psy4771 65 PEAVVK-H-KGDLYMGVDGGHILKLSGGK-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVNVT 140 (337)
Q Consensus 65 P~~i~~-~-~g~ly~d~~~g~I~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~ 140 (337)
..++++ . +..+++...+|.|..|+... ...+..+. .......+++++++|+++++-.. ..|..+|..
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID---------LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe---------cCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 344555 3 44566888899999998743 23232221 12245678999999965555433 448888987
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCcee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLF 219 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~ 219 (337)
+++...... .......++++++|. ++++...... .+.
T Consensus 249 ~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~ 286 (369)
T 3zwl_B 249 TLQVLKKYE----------------------------------------TDCPLNTAVITPLKEFIILGGGQEAK--DVT 286 (369)
T ss_dssp TCCEEEEEE----------------------------------------CSSCEEEEEECSSSSEEEEEECCC-------
T ss_pred CCceeeeec----------------------------------------CCCCceeEEecCCCceEEEeecCCCc--eEE
Confidence 776544432 112356788888887 4444332210 000
Q ss_pred ee-eecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 220 EG-LTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 220 ~~-~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.. .......+..+|..+++..... ........+++++|++.|+.+. ..+.|..++++.
T Consensus 287 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~iw~~~~ 346 (369)
T 3zwl_B 287 TTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG-EDGFIRLHHFEK 346 (369)
T ss_dssp --------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSEEEEEEECH
T ss_pred EEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc-CCCeEEEEECcc
Confidence 00 1122236778887776554333 3445678899999998655554 467888888864
No 210
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.65 E-value=0.00056 Score=66.98 Aligned_cols=75 Identities=15% Similarity=0.253 Sum_probs=52.9
Q ss_pred CCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--ccceeeEEEccCCCEEEEEeC
Q psy4771 190 KPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--LHFANGVELSADESFVIVAET 266 (337)
Q Consensus 190 ~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyva~~ 266 (337)
.+..|..|++|++|+||+++.+.....+ ......+..++.+++.++++..++.+ -+-..|++++||+++|||+-.
T Consensus 474 ~f~~PDNL~fd~~G~LwI~eDg~~~~~~--~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAG--DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSG--GGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CccCCcceEECCCCCEEEEecCCCcccc--cccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 5789999999999999997665321000 00112334688889988888776644 245679999999999999743
No 211
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.65 E-value=0.0085 Score=63.58 Aligned_cols=210 Identities=12% Similarity=0.040 Sum_probs=117.0
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g 142 (337)
.++++ .++ .+.+...+|.|..|+..+...+..+. ...+...+++++++|+++++-...+ |...|..++
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK---------AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec---------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 45566 455 45588889999999874433333332 2234567899999996666544444 888898877
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCC--cc---c-ccceeeeccc-------cCCCCCCCCccEEEcCCCcEEEEc
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQ--TG---Q-TEQLISMDTE-------IDGAKPQIPNSVTVDSDGMVYWSD 209 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~--~~---~-~~~v~~~~~~-------~~~~~~~~pn~v~vd~~G~lyvtd 209 (337)
+....... ..+. -..++++++++ ++ + ++.|...+.. +.+ .-...+.+++.++|...++.
T Consensus 690 ~~~~~~~~---~~~~----v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 690 KLVHTYDE---HSEQ----VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp CEEEEEEC---CSSC----EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-CSSCEEEEEECSSTTEEEEE
T ss_pred ceEEEEcC---CCCc----EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-CCCCEEEEEEecCCCEEEEE
Confidence 65443321 1111 12345555332 32 1 1222222211 111 12346788888888755554
Q ss_pred CCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--------------ccceeeEEEccCCCEEEEEeCCCCEEEEEE
Q psy4771 210 SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--------------LHFANGVELSADESFVIVAETMSSRVHRYY 275 (337)
Q Consensus 210 ~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--------------~~~p~gia~~~dg~~lyva~~~~~~I~~~~ 275 (337)
.. +|.|..+|..+++....... ......+++++||+.+.++. .+.|..++
T Consensus 762 s~--------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d 825 (1249)
T 3sfz_A 762 SA--------------DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFD 825 (1249)
T ss_dssp ES--------------SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEE
T ss_pred EC--------------CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEE
Confidence 33 34666666655543222110 11456789999999888877 57888888
Q ss_pred eeCCCCCceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 276 LKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 276 ~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
+.... ....+.....+....+++.++|++.++.
T Consensus 826 ~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 858 (1249)
T 3sfz_A 826 IHTSG--LLAEIHTGHHSTIQYCDFSPYDHLAVIA 858 (1249)
T ss_dssp TTTCC--EEEEEECSSSSCCCEEEECSSTTEEEEE
T ss_pred ecCCC--ceeEEcCCCCCceEEEEEcCCCCEEEEE
Confidence 75432 1222222223346678888888755544
No 212
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.0039 Score=58.53 Aligned_cols=143 Identities=13% Similarity=0.149 Sum_probs=85.2
Q ss_pred CcceEEECCCCcE-EEEECCCc-EEEEEcC--CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCC
Q psy4771 113 RPLGIKFDKNGAL-HVADAYFG-LYKVNVT--TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDG 188 (337)
Q Consensus 113 ~P~Gl~~d~~G~l-yVad~~~g-v~~vd~~--~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~ 188 (337)
...+++++++|+. +++-...+ |..+|.. +++....... ..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~--~~---------------------------------- 147 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR--FC---------------------------------- 147 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE--EE----------------------------------
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec--cc----------------------------------
Confidence 4678999999965 45543334 6666665 5543333210 00
Q ss_pred CCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeE-----EEeccccceeeEEEccC---CC
Q psy4771 189 AKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNK-----VLIANLHFANGVELSAD---ES 259 (337)
Q Consensus 189 ~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~-----~~~~~~~~p~gia~~~d---g~ 259 (337)
....+++++++++|. |++++. .|.++.++..+++.. .+.......+.++++|| ++
T Consensus 148 -~~~~v~~~~~sp~~~~l~~~~~---------------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 211 (450)
T 2vdu_B 148 -FSKRPNAISIAEDDTTVIIADK---------------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ 211 (450)
T ss_dssp -CSSCEEEEEECTTSSEEEEEET---------------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE
T ss_pred -CCCCceEEEEcCCCCEEEEEeC---------------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc
Confidence 123468899999987 443332 357788876655432 22223446788999999 76
Q ss_pred EEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 260 FVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 260 ~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
.|+.+. ..+.|..+++..... ...+..+..+....+++. +|++.++..
T Consensus 212 ~l~s~~-~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 212 FIITSD-RDEHIKISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp EEEEEE-TTSCEEEEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred EEEEEc-CCCcEEEEECCCCce--eeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 555554 567899999864321 223332233446788898 887555544
No 213
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.62 E-value=0.02 Score=52.97 Aligned_cols=69 Identities=12% Similarity=0.169 Sum_probs=46.7
Q ss_pred CCccEEEcCCC-cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee-----EEEecccc------------ceeeEEE
Q psy4771 193 IPNSVTVDSDG-MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN-----KVLIANLH------------FANGVEL 254 (337)
Q Consensus 193 ~pn~v~vd~~G-~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~-----~~~~~~~~------------~p~gia~ 254 (337)
..+.++++++| +++++-.. +|.|..+|..+++. ..+..... ....+++
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~--------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSS--------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKF 293 (447)
T ss_dssp CEEEEEECSSCTTEEEEEET--------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeC--------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEE
Confidence 46788888887 65544432 45788888776653 33332222 5688999
Q ss_pred ccCCCEEEEEeCCCCEEEEEEee
Q psy4771 255 SADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 255 ~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+++|+.|..+.. +.|..+++.
T Consensus 294 s~~g~~l~~~~~--~~v~iwd~~ 314 (447)
T 3dw8_B 294 SHSGRYMMTRDY--LSVKVWDLN 314 (447)
T ss_dssp CTTSSEEEEEES--SEEEEEETT
T ss_pred CCCCCEEEEeeC--CeEEEEeCC
Confidence 999987776665 899999885
No 214
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.62 E-value=0.012 Score=54.68 Aligned_cols=178 Identities=9% Similarity=0.059 Sum_probs=101.3
Q ss_pred EEEe-eC-CeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCe
Q psy4771 67 AVVK-HK-GDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQ 143 (337)
Q Consensus 67 ~i~~-~~-g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~ 143 (337)
++++ .+ ..+++...++.|..|+......+..+. ........+.++++|.++++-...+ |...|..+++
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~---------~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT---------GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---------CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 4445 33 455678888888888863322222221 1123356789999997776654444 7778877665
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCC--------------------C
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--------------------G 203 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~--------------------G 203 (337)
....... .. ...+.+++.++ |
T Consensus 268 ~~~~~~~---h~------------------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 268 CKAELRE---HR------------------------------------HVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EEEEECC---CS------------------------------------SCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred eeeEecC---CC------------------------------------ceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 4433210 00 11233333332 2
Q ss_pred cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC
Q psy4771 204 MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG 282 (337)
Q Consensus 204 ~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~ 282 (337)
.+.++ ...+|.|..+|..+++..... ..-...++++++++|+.|+.+. ..+.|..+++...+.
T Consensus 309 ~~l~s--------------gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~i~vwd~~~~~~- 372 (410)
T 1vyh_C 309 PFLLS--------------GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA-DDKTLRVWDYKNKRC- 372 (410)
T ss_dssp CEEEE--------------EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE-TTTEEEEECCTTSCC-
T ss_pred CEEEE--------------EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCce-
Confidence 22222 334568888888777653333 3344568999999998665544 567888888754322
Q ss_pred ceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 283 KSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 283 ~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
...+.. ..+....+++.++|.+.++.
T Consensus 373 -~~~~~~-h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 373 -MKTLNA-HEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp -CEEEEC-CSSCEEEEEECSSSSCEEEE
T ss_pred -EEEEcC-CCCcEEEEEEcCCCCEEEEE
Confidence 222222 23345778888888755543
No 215
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.015 Score=50.66 Aligned_cols=177 Identities=12% Similarity=0.016 Sum_probs=104.1
Q ss_pred cEEEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECC-CCcEEE-EECCCcEEEEEcCCCe
Q psy4771 66 EAVVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK-NGALHV-ADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 66 ~~i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~-~G~lyV-ad~~~gv~~vd~~~g~ 143 (337)
.++.++++.+++...++.|..|+.++...... ........+.+.+ +++.++ +.....|..+|.. ..
T Consensus 108 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~ 175 (313)
T 3odt_A 108 CSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQ-----------AHNASVWDAKVVSFSENKFLTASADKTIKLWQND-KV 175 (313)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTEEEEEEE-----------CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-EE
T ss_pred EEEEecCCEEEEEeCCCCEEEEcCCcEEEecc-----------cCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-ce
Confidence 45555677777888999999998544332211 1223456777766 664444 4433447777732 22
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
...+.. . .......+++.++|.++.+..
T Consensus 176 ~~~~~~---~------------------------------------~~~~i~~~~~~~~~~~~~~~~------------- 203 (313)
T 3odt_A 176 IKTFSG---I------------------------------------HNDVVRHLAVVDDGHFISCSN------------- 203 (313)
T ss_dssp EEEECS---S------------------------------------CSSCEEEEEEEETTEEEEEET-------------
T ss_pred EEEEec---c------------------------------------CcccEEEEEEcCCCeEEEccC-------------
Confidence 222211 0 123467888888888443332
Q ss_pred cCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 224 SGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
+|.|..+|..+++..... ........+++++++. |+. -...+.|..+++...+ ....+.. ..+....+++.+
T Consensus 204 --dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~-~~~dg~v~iwd~~~~~--~~~~~~~-~~~~i~~~~~~~ 276 (313)
T 3odt_A 204 --DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVS-CGEDRTVRIWSKENGS--LKQVITL-PAISIWSVDCMS 276 (313)
T ss_dssp --TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEE-EETTSEEEEECTTTCC--EEEEEEC-SSSCEEEEEECT
T ss_pred --CCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEE-EecCCEEEEEECCCCc--eeEEEec-cCceEEEEEEcc
Confidence 457888888776554333 3345678999999994 444 4456789998875432 1222222 223356788999
Q ss_pred CCCEEEEecCC
Q psy4771 303 KGNFLVSLVCP 313 (337)
Q Consensus 303 dG~l~va~~~~ 313 (337)
+|.+.++...+
T Consensus 277 ~~~~~~~~~dg 287 (313)
T 3odt_A 277 NGDIIVGSSDN 287 (313)
T ss_dssp TSCEEEEETTS
T ss_pred CCCEEEEeCCC
Confidence 99876665544
No 216
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.59 E-value=0.023 Score=50.63 Aligned_cols=181 Identities=16% Similarity=0.164 Sum_probs=104.9
Q ss_pred cEEEe-e-C-CeEEEEecCcEEEEEeCCc-----eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEE
Q psy4771 66 EAVVK-H-K-GDLYMGVDGGHILKLSGGK-----LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYK 136 (337)
Q Consensus 66 ~~i~~-~-~-g~ly~d~~~g~I~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~ 136 (337)
.++++ . + ..|.+...++.|..|+... ...+..+. ........+++.++|+.+++-...+ |..
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~---------~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK---------GHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE---------CCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe---------CCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 45555 2 3 3566889999888886411 11122221 1223466899999997666654444 888
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccC
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKS 216 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~ 216 (337)
.|.++++...... + .-...+.++++++|.+.++-..
T Consensus 92 wd~~~~~~~~~~~------~---------------------------------h~~~v~~~~~~~~~~~l~s~s~----- 127 (319)
T 3frx_A 92 WDVATGETYQRFV------G---------------------------------HKSDVMSVDIDKKASMIISGSR----- 127 (319)
T ss_dssp EETTTTEEEEEEE------C---------------------------------CSSCEEEEEECTTSCEEEEEET-----
T ss_pred EECCCCCeeEEEc------c---------------------------------CCCcEEEEEEcCCCCEEEEEeC-----
Confidence 8988776443321 1 1123578889998886655443
Q ss_pred ceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCC-----EEEEEeCCCCEEEEEEeeCCCCCceeeeecCC
Q psy4771 217 GLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADES-----FVIVAETMSSRVHRYYLKGPKQGKSEVFIDGL 291 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~-----~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~ 291 (337)
+|.|..+|..+.....+.........+++.|++. ..+++-...+.|..+++.... ....+.. .
T Consensus 128 ---------D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~-h 195 (319)
T 3frx_A 128 ---------DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIG-H 195 (319)
T ss_dssp ---------TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEECC-C
T ss_pred ---------CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeecC-C
Confidence 3467677776555555544445567788877432 245555566788888865321 1112221 2
Q ss_pred CCCCCceeECCCCCEEEEec
Q psy4771 292 PGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 292 ~g~Pdgi~~d~dG~l~va~~ 311 (337)
.+....+++.++|++.++..
T Consensus 196 ~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 196 NSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp CSCEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEe
Confidence 23346678888887555543
No 217
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.59 E-value=0.00039 Score=63.27 Aligned_cols=177 Identities=8% Similarity=-0.032 Sum_probs=90.0
Q ss_pred CeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEEEcCCCe-EEEEe
Q psy4771 73 GDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVNVTTGQ-TEQLI 148 (337)
Q Consensus 73 g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~g~-~~~l~ 148 (337)
..|.+...++.|..|+. +....+..+. ........+++.++|+++++-.. ..|...|..+++ .....
T Consensus 24 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 24 TEFVTTTATNQVELYEQDGNGWKHARTFS---------DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SEEECCCSSSCBCEEEEETTEEEECCCBC---------CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred CEEEEecCCCEEEEEEccCCceEEEEEEe---------cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 34446667777777764 3212222221 22244678999999965555333 447777776554 11111
Q ss_pred ccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCcc
Q psy4771 149 SMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGR 228 (337)
Q Consensus 149 ~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~ 228 (337)
. ..+ .-.....+++.++|+..++-. .+|.
T Consensus 95 ~----~~~---------------------------------~~~~v~~~~~~~~~~~l~~~~--------------~d~~ 123 (377)
T 3dwl_C 95 V----LLR---------------------------------LNRAATFVRWSPNEDKFAVGS--------------GARV 123 (377)
T ss_dssp E----CCC---------------------------------CSSCEEEEECCTTSSCCEEEE--------------SSSC
T ss_pred E----ecc---------------------------------cCCceEEEEECCCCCEEEEEe--------------cCCe
Confidence 0 000 122357888888876433322 2346
Q ss_pred EEEEcCCCCe----eEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC-------------ceeeeec-
Q psy4771 229 LIQYNPKTKK----NKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG-------------KSEVFID- 289 (337)
Q Consensus 229 v~~~d~~~~~----~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~-------------~~~~~~~- 289 (337)
|..+|..+++ ...+.. .-.....++++|+++.|+.+. ..+.|..+++...... ..+....
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcc
Confidence 7777766654 333333 345678999999998666554 4577888887421100 0111111
Q ss_pred CCCCCCCceeECCCCCEEEEe
Q psy4771 290 GLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 290 ~~~g~Pdgi~~d~dG~l~va~ 310 (337)
...+....++++++|++.++.
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~ 223 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYA 223 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEE
T ss_pred cCCceEEEEEECCCCCEEEEE
Confidence 122335678899999744443
No 218
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.59 E-value=0.0027 Score=54.07 Aligned_cols=94 Identities=20% Similarity=0.152 Sum_probs=59.6
Q ss_pred eeeeeCCCCCCcCcchhccccccCceeccCcccCccEEEe-eCCeEEEEecCcEEEEEeCCc--eeE----EEecCcccc
Q psy4771 31 TAFEVAPPRPLEGKLALNEKLNNAEKLFENEIHGPEAVVK-HKGDLYMGVDGGHILKLSGGK--LVP----VVKLGKDCY 103 (337)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~P~~i~~-~~g~ly~d~~~g~I~~~~~~~--~~~----~~~~g~~~~ 103 (337)
+.|.-+.|..- .+..+..+.++..+....-.++++ .+|.||+- .+|.++++++.+ ... -..+|..
T Consensus 14 ~~y~G~~P~~~-----~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-- 85 (236)
T 1tl2_A 14 KFYQGTYPQNK-----NDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNG-- 85 (236)
T ss_dssp EEEEESCCCST-----TCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECS--
T ss_pred cEEecCCCCCc-----ccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccc--
Confidence 45555555521 234555677777765667789999 69999944 889999998722 100 1112210
Q ss_pred CccccCccCCcceEEECCCCcEEEEECCCcEEEEEc
Q psy4771 104 GFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNV 139 (337)
Q Consensus 104 ~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~ 139 (337)
++ ..=..+.+|++|.||++. ...|+++++
T Consensus 86 Gw------~~F~a~~fD~~G~LYav~-dG~iyr~~p 114 (236)
T 1tl2_A 86 GW------NQFQFLFFDPNGYLYAVS-KDKLYKASP 114 (236)
T ss_dssp CG------GGCSEEEECTTSCEEEEE-TTEEEEESC
T ss_pred cc------ccceEEEECCCCCEEEeC-CCEEEEeCC
Confidence 00 113479999999999994 344889986
No 219
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.58 E-value=0.0062 Score=60.59 Aligned_cols=156 Identities=8% Similarity=-0.046 Sum_probs=85.4
Q ss_pred cceEEECCCCcEEEEE--CC---CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCC
Q psy4771 114 PLGIKFDKNGALHVAD--AY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDG 188 (337)
Q Consensus 114 P~Gl~~d~~G~lyVad--~~---~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~ 188 (337)
...+++.+||+++++. .. ..|+.+|.++++...+... ...+.
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~~~~~------------------------------- 303 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED--ESEAW------------------------------- 303 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE--ECSSC-------------------------------
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe--ccCCE-------------------------------
Confidence 4569999999665432 11 1388889988876665431 00110
Q ss_pred CCCCCCccEEEcCCCc-EEEE-cCCCCccCceeeeeecCCccEEEEc-CCCCe---eEEEecc-ccceeeEEEccCCCEE
Q psy4771 189 AKPQIPNSVTVDSDGM-VYWS-DSSTKYKSGLFEGLTSGSGRLIQYN-PKTKK---NKVLIAN-LHFANGVELSADESFV 261 (337)
Q Consensus 189 ~~~~~pn~v~vd~~G~-lyvt-d~~~~~~~~~~~~~~~~~G~v~~~d-~~~~~---~~~~~~~-~~~p~gia~~~dg~~l 261 (337)
....+..+++++||+ |++. ...... ......|+.+| ..+++ ...+..+ ......++++|||+.|
T Consensus 304 -~~~~~~~~~~spdg~~l~~~~~~~~~~--------~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l 374 (723)
T 1xfd_A 304 -LHRQNEEPVFSKDGRKFFFIRAIPQGG--------RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKI 374 (723)
T ss_dssp -CCCCCCCCEECTTSCSEEEEEEECCSS--------SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEE
T ss_pred -EeccCCCceEcCCCCeEEEEEecccCC--------CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEE
Confidence 001124788999997 6654 322110 00123788888 45555 4444322 2223346899999999
Q ss_pred EEEeCCC----CEEEEEEeeCCCCCceeeeecC--CCCCCCceeECCCCCEEEEecCC
Q psy4771 262 IVAETMS----SRVHRYYLKGPKQGKSEVFIDG--LPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 262 yva~~~~----~~I~~~~~~g~~~~~~~~~~~~--~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
|++.... .+|++++.++.. ....+... ..+....+++++||+.++.....
T Consensus 375 ~~~~~~~~~~~~~l~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~ 430 (723)
T 1xfd_A 375 YFLSTEDLPRRRQLYSANTVGNF--NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEG 430 (723)
T ss_dssp EEEESSSCTTCCEEEEECSSTTC--CCBCSSTTSSSSCCCCEEEECTTSSEEEEECCS
T ss_pred EEEEcCCCCcceEEEEEeCCCCC--CcceecccccCCCCeEEEEECCCCCEEEEEccC
Confidence 8776543 456555544321 11222211 12235678899999866655444
No 220
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.58 E-value=0.033 Score=48.81 Aligned_cols=187 Identities=12% Similarity=0.043 Sum_probs=94.8
Q ss_pred CccEEEe-eCC-eEEEEecCcEEEEEeCC--c--eeEEEecCccccCccccCccCCcceEEECC--CCcEEEEECCCc-E
Q psy4771 64 GPEAVVK-HKG-DLYMGVDGGHILKLSGG--K--LVPVVKLGKDCYGFKYEQQCGRPLGIKFDK--NGALHVADAYFG-L 134 (337)
Q Consensus 64 ~P~~i~~-~~g-~ly~d~~~g~I~~~~~~--~--~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~--~G~lyVad~~~g-v 134 (337)
.-.++++ .++ .|.+...+|.|..|+.. . ......+. ........+++.+ +++++++-...+ |
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR---------AHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE---------CCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec---------cCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3455666 344 56688889988888742 1 12222221 1224467899988 576666544444 7
Q ss_pred EEEEcCCCeE-------EEEeccccccCCCCCCCCCceeeCCC--CCcc----cccceeeeccccCC-------------
Q psy4771 135 YKVNVTTGQT-------EQLISMDTEIDGAKPQIPNSVTVDSD--GQTG----QTEQLISMDTEIDG------------- 188 (337)
Q Consensus 135 ~~vd~~~g~~-------~~l~~~~~~~~g~~~~~P~~v~~~~~--g~~~----~~~~v~~~~~~~~~------------- 188 (337)
...|.++++. ..+.... ...+ .-..++++++ |+++ .++.|...+.....
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~-~~~~----~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLN-DSKG----SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEEC-CCSS----CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred EEEecCCCcccccccCcceeeeec-ccCC----ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 7777765521 1111100 1111 1344677777 7765 22333333311100
Q ss_pred ------CCCCCCccEEEcCC---CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE---eccccceeeEEEcc
Q psy4771 189 ------AKPQIPNSVTVDSD---GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL---IANLHFANGVELSA 256 (337)
Q Consensus 189 ------~~~~~pn~v~vd~~---G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~---~~~~~~p~gia~~~ 256 (337)
........+++.++ +..+++.. .+|.+..++...++...+ ...-...+.++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 224 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSA--------------LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP 224 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEE--------------TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEec--------------CCCcEEEEccCCCceeeeeecCCCCcceeEEEECC
Confidence 11223455666654 44332222 233444444444443221 12233567899999
Q ss_pred CCC---EEEEEeCCCCEEEEEEeeC
Q psy4771 257 DES---FVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 257 dg~---~lyva~~~~~~I~~~~~~g 278 (337)
++. .++++-...+.|..+++..
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCC
Confidence 982 4555555667888888864
No 221
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.58 E-value=0.0028 Score=56.67 Aligned_cols=177 Identities=10% Similarity=0.012 Sum_probs=97.6
Q ss_pred CCeEEEEecCcEEEEEeCCcee-EEEecCccccCccccCccCCcceEE----ECCCCcEEEEECCC-cEEEEEcCCCeEE
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLV-PVVKLGKDCYGFKYEQQCGRPLGIK----FDKNGALHVADAYF-GLYKVNVTTGQTE 145 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~P~Gl~----~d~~G~lyVad~~~-gv~~vd~~~g~~~ 145 (337)
+..+++...++.|..|+..... .+..+.... .........++ ++++++++++-... .|..+|..+++..
T Consensus 129 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 129 APEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-----GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp CCEEEEEETTSCEEEECTTSCSSCSEEECCCT-----TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ccEEEEEeCCCeEEEEeCCCCCCcceeccccC-----CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 3456688888888888863221 111111100 01112344565 67788666654444 4888898877764
Q ss_pred EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC---CCcEEEEcCCCCccCceeeee
Q psy4771 146 QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS---DGMVYWSDSSTKYKSGLFEGL 222 (337)
Q Consensus 146 ~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~---~G~lyvtd~~~~~~~~~~~~~ 222 (337)
.... . ....+.+++++ +|..+++-..
T Consensus 204 ~~~~----~------------------------------------~~~v~~~~~~~~~~~~~~l~~~~~----------- 232 (357)
T 3i2n_A 204 WETN----I------------------------------------KNGVCSLEFDRKDISMNKLVATSL----------- 232 (357)
T ss_dssp EEEE----C------------------------------------SSCEEEEEESCSSSSCCEEEEEES-----------
T ss_pred eecC----C------------------------------------CCceEEEEcCCCCCCCCEEEEECC-----------
Confidence 4332 1 12357888888 7764444322
Q ss_pred ecCCccEEEEcCCCCeeE------EEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCC--------------
Q psy4771 223 TSGSGRLIQYNPKTKKNK------VLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQG-------------- 282 (337)
Q Consensus 223 ~~~~G~v~~~d~~~~~~~------~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~-------------- 282 (337)
+|.|..+|..+++.. .....-.....++++|+++.++++-...+.|..+++......
T Consensus 233 ---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 233 ---EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp ---TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred ---CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccc
Confidence 345666665433211 111334456889999999756666667789999998642111
Q ss_pred ---ceeeeecCCCCCCCceeECCCCCEEE
Q psy4771 283 ---KSEVFIDGLPGLPDNVKRDSKGNFLV 308 (337)
Q Consensus 283 ---~~~~~~~~~~g~Pdgi~~d~dG~l~v 308 (337)
....+.. ..+....++++++|.+.+
T Consensus 310 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 310 SVSLLQNVTL-STQPISSLDWSPDKRGLC 337 (357)
T ss_dssp EEEEEEEEEC-CSSCEEEEEECSSSTTEE
T ss_pred ccceeecccc-CCCCeeEEEEcCCCCeEE
Confidence 0111111 223356788899987554
No 222
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.58 E-value=0.011 Score=54.84 Aligned_cols=168 Identities=8% Similarity=-0.026 Sum_probs=91.3
Q ss_pred CccEEEe-eCCeEE-EEecCcEEEEEeCC-ceeEEEecCccccCccccCccCCcceEEECCCC-cEEEEECCCc-EEEEE
Q psy4771 64 GPEAVVK-HKGDLY-MGVDGGHILKLSGG-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNG-ALHVADAYFG-LYKVN 138 (337)
Q Consensus 64 ~P~~i~~-~~g~ly-~d~~~g~I~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G-~lyVad~~~g-v~~vd 138 (337)
.-.++++ .++.++ ++ .++.|..|+.. ....+..+.... .. ..........++++++| +++++-...+ |..+|
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~-~~-~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKP-AN-MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCC-SS-GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccc-cc-ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence 3456777 455555 66 79999999875 222222110000 00 01223457799999998 7766654444 88888
Q ss_pred cCCCeE-----EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCC
Q psy4771 139 VTTGQT-----EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTK 213 (337)
Q Consensus 139 ~~~g~~-----~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~ 213 (337)
..+++. ..+... .... .. .. +. ......+.++++++|++.++-..
T Consensus 256 ~~~~~~~~~~~~~~~~~---~~~~------~~--------------~~----~~-~~~~~v~~~~~s~~g~~l~~~~~-- 305 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEP---EDPS------NR--------------SF----FS-EIISSISDVKFSHSGRYMMTRDY-- 305 (447)
T ss_dssp TTTCSSSCTTCEEECCC--------------C--------------CH----HH-HHTTCEEEEEECTTSSEEEEEES--
T ss_pred CcCCccccceeeEeccC---CCcc------cc--------------cc----cc-ccCceEEEEEECCCCCEEEEeeC--
Confidence 776653 332210 0000 00 00 00 00124688999999886554322
Q ss_pred ccCceeeeeecCCccEEEEcCCC-CeeEEEeccccc----------------eeeEEEccCCCEEEEEeCCCCEEEEEEe
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKT-KKNKVLIANLHF----------------ANGVELSADESFVIVAETMSSRVHRYYL 276 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~-~~~~~~~~~~~~----------------p~gia~~~dg~~lyva~~~~~~I~~~~~ 276 (337)
|.|..+|..+ ++......+... ...+++++|++.| ++-...+.|..+++
T Consensus 306 -------------~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 306 -------------LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDR 371 (447)
T ss_dssp -------------SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEET
T ss_pred -------------CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEc
Confidence 4777777664 432211211111 1238999999866 55666789999987
Q ss_pred eC
Q psy4771 277 KG 278 (337)
Q Consensus 277 ~g 278 (337)
..
T Consensus 372 ~~ 373 (447)
T 3dw8_B 372 NT 373 (447)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 223
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.55 E-value=0.015 Score=51.83 Aligned_cols=94 Identities=9% Similarity=-0.032 Sum_probs=55.0
Q ss_pred CccEEEe-eC----CeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EE
Q psy4771 64 GPEAVVK-HK----GDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LY 135 (337)
Q Consensus 64 ~P~~i~~-~~----g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~ 135 (337)
.-.++++ .+ ..|++...+|.|..|+.. .......+. ........+++.++|+.+++-...+ |.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ---------MHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE---------ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec---------cccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 3456666 33 345588889988888752 221111111 1224567999999996555544444 88
Q ss_pred EEEcCCCeEEEEeccccccCCCCCCCCCceee--CCCCCcc
Q psy4771 136 KVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV--DSDGQTG 174 (337)
Q Consensus 136 ~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~--~~~g~~~ 174 (337)
..|.++++...+.. ..+ .-..+++ +++|+++
T Consensus 112 iwd~~~~~~~~~~~----~~~----~v~~~~~~~~~~~~~l 144 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQ----HDA----PVKTIHWIKAPNYSCV 144 (368)
T ss_dssp EEETTTTEEEEEEE----CSS----CEEEEEEEECSSCEEE
T ss_pred EEEcCCCCceeecc----ccC----ceEEEEEEeCCCCCEE
Confidence 88988887666543 111 1234555 6777655
No 224
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.53 E-value=0.00052 Score=68.59 Aligned_cols=128 Identities=9% Similarity=0.082 Sum_probs=73.7
Q ss_pred eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEEC---------CCcEEEEE
Q psy4771 71 HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADA---------YFGLYKVN 138 (337)
Q Consensus 71 ~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~---------~~gv~~vd 138 (337)
.++.+.....++.|+.|+. ++...+. .... ........++++|||+ |+++.. ...|+.+|
T Consensus 25 ~dg~~~~~~~d~~i~~~~~~~g~~~~~~--~~~~------~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 25 SGQEYLHQSADNNIVLYNIETGQSYTIL--SNRT------MKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp SSSEEEEECTTSCEEEEESSSCCEEEEE--CHHH------HHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCeEEEEcCCCCEEEEEcCCCcEEEEE--cccc------ccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 3455444446788888886 3333221 1100 0001256899999995 444432 13478888
Q ss_pred cCCCeE---EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCc
Q psy4771 139 VTTGQT---EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKY 214 (337)
Q Consensus 139 ~~~g~~---~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~ 214 (337)
.++++. ..+ ......++++|||+ |.++..
T Consensus 97 ~~~g~~~~~~~l-------------------------------------------~~~~~~~~~SPDG~~la~~~~---- 129 (719)
T 1z68_A 97 LSNGEFVRGNEL-------------------------------------------PRPIQYLCWSPVGSKLAYVYQ---- 129 (719)
T ss_dssp TTTTEECCSSCC-------------------------------------------CSSBCCEEECSSTTCEEEEET----
T ss_pred CCCCccccceec-------------------------------------------CcccccceECCCCCEEEEEEC----
Confidence 877754 111 02256788999986 554432
Q ss_pred cCceeeeeecCCccEEEEcCCCCeeEEEeccc-------------------cceeeEEEccCCCEEEEEe
Q psy4771 215 KSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL-------------------HFANGVELSADESFVIVAE 265 (337)
Q Consensus 215 ~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-------------------~~p~gia~~~dg~~lyva~ 265 (337)
+.|+.+|..+++...+.... ....+++++|||++|+++.
T Consensus 130 ------------~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 130 ------------NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp ------------TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred ------------CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 26777777666654432111 1225899999999987765
No 225
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.013 Score=59.09 Aligned_cols=210 Identities=11% Similarity=0.076 Sum_probs=110.9
Q ss_pred CCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC--CcEEEEECCCc-EEEEEcCCCeEEE
Q psy4771 72 KGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN--GALHVADAYFG-LYKVNVTTGQTEQ 146 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~--G~lyVad~~~g-v~~vd~~~g~~~~ 146 (337)
+..+.+...+|.|..|+. ++...+..+. ...+...++++.++ |+++++-...| |...|..+++...
T Consensus 21 g~~latg~~dg~I~vwd~~~~~~~~~~~l~---------~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGETHKLIDTLT---------GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTEEEEEEEEC---------CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCcEEEEecCCCCCccceecc---------CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc
Confidence 445668888998888875 2433333331 12244678999877 76665544444 7777877775333
Q ss_pred EeccccccCCCCCCCCCceeeCCC--CCcc----cccceeeeccccCCC--------CCCCCccEEEcCC----------
Q psy4771 147 LISMDTEIDGAKPQIPNSVTVDSD--GQTG----QTEQLISMDTEIDGA--------KPQIPNSVTVDSD---------- 202 (337)
Q Consensus 147 l~~~~~~~~g~~~~~P~~v~~~~~--g~~~----~~~~v~~~~~~~~~~--------~~~~pn~v~vd~~---------- 202 (337)
..... ...+ .-..++++++ |+++ .++.|...+...... .......+++++.
T Consensus 92 ~~~~~-~h~~----~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 92 IAVHA-VHSA----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp EEEEC-CCSS----CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred ccccc-CCCC----CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 33211 0111 1245777777 7766 223343333211100 1123455666552
Q ss_pred ---CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCe----eE-EEeccccceeeEEEccC---CCEEEEEeCCCCEE
Q psy4771 203 ---GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK----NK-VLIANLHFANGVELSAD---ESFVIVAETMSSRV 271 (337)
Q Consensus 203 ---G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~----~~-~~~~~~~~p~gia~~~d---g~~lyva~~~~~~I 271 (337)
|.+.+ ....+|.|..+|..++. .. .+...-.....++++|+ ++ ++++-...+.|
T Consensus 167 ~~d~~~l~--------------sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I 231 (753)
T 3jro_A 167 TKESRKFV--------------TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTC 231 (753)
T ss_dssp CGGGCCEE--------------EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCE
T ss_pred CCCCCEEE--------------EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEE
Confidence 33222 23335667666655442 11 12223445688999999 65 55555566789
Q ss_pred EEEEeeCCCCCceeeeec--CCCCCCCceeECCCCCEEEEe
Q psy4771 272 HRYYLKGPKQGKSEVFID--GLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~--~~~g~Pdgi~~d~dG~l~va~ 310 (337)
..+++............. ...+....++++++|.+.++.
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 999986532111111111 123446778899998744443
No 226
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.52 E-value=0.02 Score=50.42 Aligned_cols=230 Identities=12% Similarity=0.047 Sum_probs=107.4
Q ss_pred EEEe-eCC-eEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCC--CcEEEEECCCc-EEEEEc
Q psy4771 67 AVVK-HKG-DLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN--GALHVADAYFG-LYKVNV 139 (337)
Q Consensus 67 ~i~~-~~g-~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~--G~lyVad~~~g-v~~vd~ 139 (337)
++++ .+| .|.+...++.|..|+.. ....+..+. ...+...++++.++ |+++++-+..+ |...|.
T Consensus 14 ~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~---------gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 14 DAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT---------GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC---------CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred EEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc---------cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4555 344 55688889988888752 222222221 12234568998753 76666644444 777787
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCC--CCcc---cc-cceeeeccccCC--------CCCCCCccEEEcCCCcE
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GQTG---QT-EQLISMDTEIDG--------AKPQIPNSVTVDSDGMV 205 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~--g~~~---~~-~~v~~~~~~~~~--------~~~~~pn~v~vd~~G~l 205 (337)
++++...+.... ...+ .-..++++++ |+++ .. +.|...+..... ......+.+++.+++..
T Consensus 85 ~~~~~~~~~~~~-~h~~----~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 85 ENGRWSQIAVHA-VHSA----SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp SSSCBCCCEEEC-CCSS----CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred CCCceEEEEEee-cCCC----ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 765322111100 0011 1234566665 5555 22 233322211100 00122345566654210
Q ss_pred EEEcCCCCccCceeeeeecCCccEEEEcCCCCe----e-EEEeccccceeeEEEccCC--CEEEEEeCCCCEEEEEEeeC
Q psy4771 206 YWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK----N-KVLIANLHFANGVELSADE--SFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 206 yvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~----~-~~~~~~~~~p~gia~~~dg--~~lyva~~~~~~I~~~~~~g 278 (337)
-... .....+....+....+|.|..+|..+++ . ..+...-...+.++++|++ ..++++-...+.|..++++.
T Consensus 160 ~~~~-~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 160 EDGE-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccc-CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 0000 0000000011123345566555544432 1 1222334457899999986 45666766778888888864
Q ss_pred CCCC-ceeeee-cCCCCCCCceeECCCCCEEEEec
Q psy4771 279 PKQG-KSEVFI-DGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 279 ~~~~-~~~~~~-~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
.... ....+. ...++....+++.++|++.++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 3211 112221 12233345678888887655543
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.51 E-value=0.0062 Score=55.61 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=45.1
Q ss_pred EeeCCeEEEEecCcEEEEEeCCceeEE--EecCccccCccccCccCCc-ceEEECCCCcEEEEECCCcEEEEEcCCCeEE
Q psy4771 69 VKHKGDLYMGVDGGHILKLSGGKLVPV--VKLGKDCYGFKYEQQCGRP-LGIKFDKNGALHVADAYFGLYKVNVTTGQTE 145 (337)
Q Consensus 69 ~~~~g~ly~d~~~g~I~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~P-~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~ 145 (337)
++.++.+|+...++.|+.++..+.+.. ...+.... ......... ..+.+ .+|++|++.....|+.+|.++|+..
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG--WFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccc--cccccCcccccCceE-eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 457899998888899999997332222 11211000 000001112 23444 4679999976566999999988876
Q ss_pred EEe
Q psy4771 146 QLI 148 (337)
Q Consensus 146 ~l~ 148 (337)
.-.
T Consensus 127 W~~ 129 (376)
T 3q7m_A 127 WQT 129 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 228
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0064 Score=55.65 Aligned_cols=193 Identities=9% Similarity=0.075 Sum_probs=107.8
Q ss_pred ccEEEe-e--CCeEEEEecCcEEEEEeCCcee------EEEecCccccCccccCccCCcceEEECCC-CcEEEEECCCc-
Q psy4771 65 PEAVVK-H--KGDLYMGVDGGHILKLSGGKLV------PVVKLGKDCYGFKYEQQCGRPLGIKFDKN-GALHVADAYFG- 133 (337)
Q Consensus 65 P~~i~~-~--~g~ly~d~~~g~I~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~-G~lyVad~~~g- 133 (337)
-.++++ . +..+++...++.|..|+..... ....... .........++++.++ ++++++-...+
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 189 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ------SMSSVDEVISLAWNQSLAHVFASAGSSNF 189 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC------SCCSSCCCCEEEECSSCTTEEEEESSSSC
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc------ccCCCCCeeEEEeCCCCCcEEEEEcCCCC
Confidence 345666 2 3455688888888888763221 1101100 0122345679999999 57777654444
Q ss_pred EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC-cEEEEcCCC
Q psy4771 134 LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSST 212 (337)
Q Consensus 134 v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G-~lyvtd~~~ 212 (337)
|..+|.++++............+ .-...+.++++++| .++++....
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSG---------------------------------IKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSC---------------------------------CCCCEEEEEECSSCTTEEEEEECC
T ss_pred EEEEECCCCCcceEEeccccccc---------------------------------cCCceEEEEECCCCCCEEEEEECC
Confidence 88889887765444321000000 02346889999987 455444321
Q ss_pred CccCceeeeeecCCccEEEEcCCCC-ee-EEEe-ccccceeeEEEcc-CCCEEEEEeCCCCEEEEEEeeCCCCCceeeee
Q psy4771 213 KYKSGLFEGLTSGSGRLIQYNPKTK-KN-KVLI-ANLHFANGVELSA-DESFVIVAETMSSRVHRYYLKGPKQGKSEVFI 288 (337)
Q Consensus 213 ~~~~~~~~~~~~~~G~v~~~d~~~~-~~-~~~~-~~~~~p~gia~~~-dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~ 288 (337)
. ..+.|..+|..++ +. ..+. ..-.....++++| +++.|+.+ ...+.|..+++...+ ....+.
T Consensus 237 ~-----------~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~-~~dg~v~~wd~~~~~--~~~~~~ 302 (416)
T 2pm9_A 237 D-----------NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS-GRDNTVLLWNPESAE--QLSQFP 302 (416)
T ss_dssp S-----------SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE-ESSSEEEEECSSSCC--EEEEEE
T ss_pred C-----------CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE-eCCCCEEEeeCCCCc--cceeec
Confidence 0 1126667776654 22 2222 2344568899999 77655544 456789888875432 122222
Q ss_pred cCCCCCCCceeECCCC-CEEEEec
Q psy4771 289 DGLPGLPDNVKRDSKG-NFLVSLV 311 (337)
Q Consensus 289 ~~~~g~Pdgi~~d~dG-~l~va~~ 311 (337)
. ..+....+++.++| .++++..
T Consensus 303 ~-~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 303 A-RGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp C-SSSCCCCEEECTTCTTEEEECC
T ss_pred C-CCCceEEEEECCCCCCEEEEEe
Confidence 2 23446788888888 5655544
No 229
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.49 E-value=0.03 Score=50.31 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=56.9
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCC-CCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEE
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK-TKKNKVLIANLHFANGVELSADESFVIVAETMSSRV 271 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~-~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I 271 (337)
..+.++++++|+..++-.. +|.|..+|.. .+............+.++++|++..+.++. .+.|
T Consensus 215 ~v~~~~~s~~g~~l~sgs~--------------dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~--d~~v 278 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGK--------------DKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT--DQGV 278 (343)
T ss_dssp CEEEEEECTTSSEEEEEET--------------TCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE--SSCE
T ss_pred cceEEEECCCCCEEEEEcC--------------CCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC--CCCE
Confidence 3678999999986655432 4577777763 222222222233468999999997665554 4567
Q ss_pred EEEEeeCCCCCceeeeec----------CCCCCCCceeECCCCCEEEE
Q psy4771 272 HRYYLKGPKQGKSEVFID----------GLPGLPDNVKRDSKGNFLVS 309 (337)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~----------~~~g~Pdgi~~d~dG~l~va 309 (337)
..+++..........+.. +..+....++++++|.+.++
T Consensus 279 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s 326 (343)
T 2xzm_R 279 KIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA 326 (343)
T ss_dssp EEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred EEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence 778775432211111110 11122346888898874443
No 230
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.49 E-value=0.0083 Score=54.57 Aligned_cols=151 Identities=6% Similarity=-0.001 Sum_probs=92.9
Q ss_pred cEEEe-e-C-CeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCC
Q psy4771 66 EAVVK-H-K-GDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~-~-g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~ 141 (337)
.++++ . + ..+++...++.|..|+..+.. +..+... .........+++.++|+.+++-... .|..+|..+
T Consensus 122 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 194 (383)
T 3ei3_B 122 TGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFAKT------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG 194 (383)
T ss_dssp EEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEECC------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS
T ss_pred eEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEecc------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC
Confidence 45556 3 3 355588889989888863211 1111100 0112446789999999665554444 488888865
Q ss_pred CeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCceee
Q psy4771 142 GQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFE 220 (337)
Q Consensus 142 g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~ 220 (337)
..+..+.. ......+++++++|. ++++...
T Consensus 195 ~~~~~~~~----------------------------------------h~~~v~~~~~~~~~~~~l~s~~~--------- 225 (383)
T 3ei3_B 195 HEIFKEKL----------------------------------------HKAKVTHAEFNPRCDWLMATSSV--------- 225 (383)
T ss_dssp CEEEEEEC----------------------------------------SSSCEEEEEECSSCTTEEEEEET---------
T ss_pred CEEEEecc----------------------------------------CCCcEEEEEECCCCCCEEEEEeC---------
Confidence 54444432 123468899999887 6655433
Q ss_pred eeecCCccEEEEcCCC----CeeEEEeccccceeeEEEcc-CCCEEEEEeCCCCEEEEEEeeC
Q psy4771 221 GLTSGSGRLIQYNPKT----KKNKVLIANLHFANGVELSA-DESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~----~~~~~~~~~~~~p~gia~~~-dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..+ ++.......-.....+++++ +++.|+++. ..+.|..+++..
T Consensus 226 -----d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~-~d~~i~iwd~~~ 282 (383)
T 3ei3_B 226 -----DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD-QRNEIRVYSSYD 282 (383)
T ss_dssp -----TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE-SSSEEEEEETTB
T ss_pred -----CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc-CCCcEEEEECCC
Confidence 34667777654 33333334455678999999 998666555 467999999864
No 231
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.48 E-value=0.0083 Score=54.50 Aligned_cols=141 Identities=7% Similarity=0.029 Sum_probs=85.9
Q ss_pred CeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccc
Q psy4771 73 GDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 73 g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~ 151 (337)
..+++...++.|..|+......+..+. .......++++.++|+++++-...+ |..+|..+++.......
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~---------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~- 280 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFE---------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK- 280 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEec---------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-
Confidence 356688888888888863333232221 1224467899999997766654444 78888776643333210
Q ss_pred cccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEE
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQ 231 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~ 231 (337)
.. .......++++++|.+.++... +|.|..
T Consensus 281 ---~~---------------------------------~~~~~~~~~~s~~g~~l~~g~~--------------d~~i~v 310 (354)
T 2pbi_B 281 ---ES---------------------------------IIFGASSVDFSLSGRLLFAGYN--------------DYTINV 310 (354)
T ss_dssp ---TT---------------------------------CCSCEEEEEECTTSSEEEEEET--------------TSCEEE
T ss_pred ---CC---------------------------------cccceeEEEEeCCCCEEEEEEC--------------CCcEEE
Confidence 00 1223567889999886655432 457888
Q ss_pred EcCCCCeeE-EEeccccceeeEEEccCCCEEEEEeCCCCEEEEE
Q psy4771 232 YNPKTKKNK-VLIANLHFANGVELSADESFVIVAETMSSRVHRY 274 (337)
Q Consensus 232 ~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~ 274 (337)
+|..+++.. .+...-.....++++|||+.|..+. ..+.|..+
T Consensus 311 wd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs-~D~~v~vW 353 (354)
T 2pbi_B 311 WDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS-WDHTLRVW 353 (354)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE-TTSEEEEE
T ss_pred EECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc-CCCCEEec
Confidence 887666533 3333445668999999998655544 44565543
No 232
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.47 E-value=0.015 Score=57.82 Aligned_cols=184 Identities=14% Similarity=0.052 Sum_probs=105.6
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCC
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTG 142 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g 142 (337)
.++++ .++ .|.+...++.|..|+.........+. .......+++++++|+.+++-+.. .|...|..+.
T Consensus 434 ~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV---------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe---------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 45566 344 45588889999999864333222221 122446789999999655554444 4777776544
Q ss_pred eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC--cEEEEcCCCCccCceee
Q psy4771 143 QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG--MVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 143 ~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G--~lyvtd~~~~~~~~~~~ 220 (337)
....+... ..+ .....+.+++.+++ ...++-.
T Consensus 505 ~~~~~~~~---~~~---------------------------------h~~~v~~~~~~~~~~~~~l~s~s---------- 538 (694)
T 3dm0_A 505 CKYTISEG---GEG---------------------------------HRDWVSCVRFSPNTLQPTIVSAS---------- 538 (694)
T ss_dssp EEEEECSS---TTS---------------------------------CSSCEEEEEECSCSSSCEEEEEE----------
T ss_pred cceeeccC---CCC---------------------------------CCCcEEEEEEeCCCCcceEEEEe----------
Confidence 33333210 011 12235678888775 2333332
Q ss_pred eeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCcee
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVK 299 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~ 299 (337)
.+|.|..+|..+++...... +....+.++++||++.|.. -...+.|..+++...+ .+..-........++
T Consensus 539 ----~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s-g~~Dg~i~iwd~~~~~----~~~~~~~~~~v~~~~ 609 (694)
T 3dm0_A 539 ----WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS-GGKDGVVLLWDLAEGK----KLYSLEANSVIHALC 609 (694)
T ss_dssp ----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE-EETTSBCEEEETTTTE----EEECCBCSSCEEEEE
T ss_pred ----CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE-EeCCCeEEEEECCCCc----eEEEecCCCcEEEEE
Confidence 24577788877766544333 3445689999999975554 4456788888875321 111111123356778
Q ss_pred ECCCCCEEEEecCC
Q psy4771 300 RDSKGNFLVSLVCP 313 (337)
Q Consensus 300 ~d~dG~l~va~~~~ 313 (337)
+.++|.+.++....
T Consensus 610 ~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 610 FSPNRYWLCAATEH 623 (694)
T ss_dssp ECSSSSEEEEEETT
T ss_pred EcCCCcEEEEEcCC
Confidence 88888766655433
No 233
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.47 E-value=0.008 Score=58.05 Aligned_cols=185 Identities=11% Similarity=0.053 Sum_probs=101.7
Q ss_pred ccEEEe-eCCe-EEEEecCcEEEEEeCCce----eEEEecCccccCccccCccCC-cceEEECC--CCcEEEEECCCc-E
Q psy4771 65 PEAVVK-HKGD-LYMGVDGGHILKLSGGKL----VPVVKLGKDCYGFKYEQQCGR-PLGIKFDK--NGALHVADAYFG-L 134 (337)
Q Consensus 65 P~~i~~-~~g~-ly~d~~~g~I~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~-P~Gl~~d~--~G~lyVad~~~g-v 134 (337)
+.++++ .++. +.+.. ++.|..|+..+. .....+. ..... ...+++.+ +|+++++-...+ |
T Consensus 21 v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~---------~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFT---------GHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEEC---------TTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEe---------cCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 344555 3444 44443 777888876322 2222221 22244 68999999 996655543444 6
Q ss_pred EEEEcCCC------eEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEE
Q psy4771 135 YKVNVTTG------QTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 208 (337)
Q Consensus 135 ~~vd~~~g------~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvt 208 (337)
...|..++ ....+.. ..+ .-.....++++++|+..++
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~----~~~---------------------------------~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSE----FQV---------------------------------LAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEE----EEC---------------------------------CSSCEEEEEECTTSSEEEE
T ss_pred EEEeCCCCcccccccccccch----hhc---------------------------------ccccEEEEEEeCCCCEEEE
Confidence 66666433 2222211 000 1234688999999974443
Q ss_pred cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee
Q psy4771 209 DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI 288 (337)
Q Consensus 209 d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~ 288 (337)
-.... +..|.|+.+|. ......+...-.....++++++++.++++-...+.|..+++...+ ....+.
T Consensus 134 ~~~~~----------~~~~~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~ 200 (615)
T 1pgu_A 134 VGEGR----------DNFGVFISWDS-GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR 200 (615)
T ss_dssp EECCS----------SCSEEEEETTT-CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC
T ss_pred eccCC----------CCccEEEEEEC-CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec
Confidence 32211 12357777773 233334444455678999999998566666667899998864321 112222
Q ss_pred cCCCC---CCCceeECCC-CCEEEEe
Q psy4771 289 DGLPG---LPDNVKRDSK-GNFLVSL 310 (337)
Q Consensus 289 ~~~~g---~Pdgi~~d~d-G~l~va~ 310 (337)
. ..+ ....+++.++ |++.++.
T Consensus 201 ~-~~~~~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 201 T-HHKQGSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp S-SSCTTCCEEEEEECSTTCCEEEEE
T ss_pred c-cCCCCceEEEEEECCCCCCEEEEE
Confidence 1 122 3457888888 8755543
No 234
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.46 E-value=0.012 Score=53.48 Aligned_cols=159 Identities=11% Similarity=0.093 Sum_probs=89.0
Q ss_pred cEEEe-e-CC-eEEEEecCcEEEEEeCCcee--EEEecCcccc-C-ccccCccCCcceEEECC-CCcEEEEECCC-cEEE
Q psy4771 66 EAVVK-H-KG-DLYMGVDGGHILKLSGGKLV--PVVKLGKDCY-G-FKYEQQCGRPLGIKFDK-NGALHVADAYF-GLYK 136 (337)
Q Consensus 66 ~~i~~-~-~g-~ly~d~~~g~I~~~~~~~~~--~~~~~g~~~~-~-~~~~~~~~~P~Gl~~d~-~G~lyVad~~~-gv~~ 136 (337)
.++++ . ++ .+++...+|.|..|+..+.. ........+. . ............+++.+ +++++++-... .|..
T Consensus 47 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 126 (408)
T 4a11_B 47 NTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKV 126 (408)
T ss_dssp EEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEE
T ss_pred EEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEE
Confidence 45555 3 44 45588889989888763211 1000000000 0 00001334567899999 55555554334 4888
Q ss_pred EEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC---CCcEEEEcCCCC
Q psy4771 137 VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS---DGMVYWSDSSTK 213 (337)
Q Consensus 137 vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~---~G~lyvtd~~~~ 213 (337)
.|..+++....... ......+.+.+ ++.+.++.
T Consensus 127 wd~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~---- 162 (408)
T 4a11_B 127 WDTNTLQTADVFNF----------------------------------------EETVYSHHMSPVSTKHCLVAVG---- 162 (408)
T ss_dssp EETTTTEEEEEEEC----------------------------------------SSCEEEEEECSSCSSCCEEEEE----
T ss_pred eeCCCCccceeccC----------------------------------------CCceeeeEeecCCCCCcEEEEE----
Confidence 88887765554421 11134444544 23333222
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
..+|.|..+|..+++...... .-.....++++|+++.++++-...+.|..+++..
T Consensus 163 ----------~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 163 ----------TRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp ----------ESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred ----------cCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 234678888877665433333 3445688999999987666666678899998853
No 235
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.46 E-value=0.0023 Score=58.44 Aligned_cols=83 Identities=16% Similarity=0.285 Sum_probs=57.4
Q ss_pred cEEEEcCCCCeeEEEe-------ccccceeeEEE--ccC-CC-EEEEEeCCCCEEEEEEeeCCCCC--c---eeeeecCC
Q psy4771 228 RLIQYNPKTKKNKVLI-------ANLHFANGVEL--SAD-ES-FVIVAETMSSRVHRYYLKGPKQG--K---SEVFIDGL 291 (337)
Q Consensus 228 ~v~~~d~~~~~~~~~~-------~~~~~p~gia~--~~d-g~-~lyva~~~~~~I~~~~~~g~~~~--~---~~~~~~~~ 291 (337)
++|.+||++++++.+. ..+..|.|+|+ +++ ++ ++||++.. +++..|++.....+ . .+.|. +
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~--l 178 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFK--M 178 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEE--C
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEec--C
Confidence 5677798888766552 33578999999 764 43 57888766 79999888532222 1 12222 5
Q ss_pred CCCCCceeECCC-CCEEEEecCC
Q psy4771 292 PGLPDNVKRDSK-GNFLVSLVCP 313 (337)
Q Consensus 292 ~g~Pdgi~~d~d-G~l~va~~~~ 313 (337)
++.|.|+++|++ |.|||+.-..
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCcceEEEcCCCCeEEEecccc
Confidence 677999999964 7799998655
No 236
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.45 E-value=0.023 Score=55.62 Aligned_cols=224 Identities=13% Similarity=0.129 Sum_probs=108.5
Q ss_pred cEEEe-eCC--eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCC
Q psy4771 66 EAVVK-HKG--DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTT 141 (337)
Q Consensus 66 ~~i~~-~~g--~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~ 141 (337)
.++++ .++ .+.+...++.|..|+....+....+. ........++|.++|+++++-...+ |...|..+
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~---------~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG---------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec---------cccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 45566 343 35688889988888864333333332 1224577999999998777654444 88888776
Q ss_pred CeEEEEeccc-cccCCCCCCCCCceeeCCCCCcc---ccc-ceeeeccccCCCCCCCCccEEEcC--CCcEEEEcCCCCc
Q psy4771 142 GQTEQLISMD-TEIDGAKPQIPNSVTVDSDGQTG---QTE-QLISMDTEIDGAKPQIPNSVTVDS--DGMVYWSDSSTKY 214 (337)
Q Consensus 142 g~~~~l~~~~-~~~~g~~~~~P~~v~~~~~g~~~---~~~-~v~~~~~~~~~~~~~~pn~v~vd~--~G~lyvtd~~~~~ 214 (337)
++........ ....+.. -....++++++|+++ +.+ .|...+.. .+. ...-+.... ....+-......
T Consensus 222 g~~~~~~~~~~~~~~~h~-~~V~~v~~spdg~~l~s~s~D~~v~lWd~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~- 295 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHS-GSVFGLTWSPDGTKIASASADKTIKIWNVA-TLK---VEKTIPVGTRIEDQQLGIIWTKQ- 295 (611)
T ss_dssp CCEEEECBCTTSSSCSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETT-TTE---EEEEEECCSSGGGCEEEEEECSS-
T ss_pred CcEeeeeccccccccccC-CCEEEEEECCCCCEEEEEeCCCeEEEEeCC-CCc---eeeeecCCCCccceeEEEEEcCC-
Confidence 6544332100 0000100 012235555555544 112 22211100 000 000000000 000000000000
Q ss_pred cCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCC
Q psy4771 215 KSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPG 293 (337)
Q Consensus 215 ~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g 293 (337)
..+....+|.+..+|+.+++..... ........++++|||+.|+.+. ..++|..+++..... ...+......
T Consensus 296 ----~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~~--~~~~~~~h~~ 368 (611)
T 1nr0_A 296 ----ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD-AEGHINSWDISTGIS--NRVFPDVHAT 368 (611)
T ss_dssp ----CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCE--EECSSCSCSS
T ss_pred ----EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCce--eeecccCCcc
Confidence 1122345667777887776543333 3344568999999998776665 456888888754321 1111121222
Q ss_pred CCCceeECCCCCEEEEec
Q psy4771 294 LPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 294 ~Pdgi~~d~dG~l~va~~ 311 (337)
....+++.++|.+..+..
T Consensus 369 ~v~~~~~s~~~~l~s~s~ 386 (611)
T 1nr0_A 369 MITGIKTTSKGDLFTVSW 386 (611)
T ss_dssp CEEEEEECTTSCEEEEET
T ss_pred eEEEEEECCCCcEEEEEc
Confidence 345667776666665544
No 237
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.45 E-value=0.0062 Score=54.31 Aligned_cols=173 Identities=9% Similarity=0.036 Sum_probs=95.3
Q ss_pred CeEEEEecCcEEEEEeCCcee-EEEecCccccCccccCccCCcceE------EECCCCcEEEEECCC-cEEEEEcCCCe-
Q psy4771 73 GDLYMGVDGGHILKLSGGKLV-PVVKLGKDCYGFKYEQQCGRPLGI------KFDKNGALHVADAYF-GLYKVNVTTGQ- 143 (337)
Q Consensus 73 g~ly~d~~~g~I~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~P~Gl------~~d~~G~lyVad~~~-gv~~vd~~~g~- 143 (337)
..+++...++.|..|+..... .+..+. ........+ +++++|+++++-... .|..+|..+++
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~ 151 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVK---------GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD 151 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEEC---------CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEE---------ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC
Confidence 556688889989988863221 111121 111234455 456788555554444 47778876553
Q ss_pred -EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEE----EcCCCcEEEEcCCCCccCce
Q psy4771 144 -TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVT----VDSDGMVYWSDSSTKYKSGL 218 (337)
Q Consensus 144 -~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~----vd~~G~lyvtd~~~~~~~~~ 218 (337)
+..+.. ..+. .......++ ++++|++.++..
T Consensus 152 ~~~~~~~----~~~~--------------------------------~~~~v~~~~~~~~~~~~~~~l~~~~-------- 187 (357)
T 3i2n_A 152 PVANMEP----VQGE--------------------------------NKRDCWTVAFGNAYNQEERVVCAGY-------- 187 (357)
T ss_dssp CSEEECC----CTTS--------------------------------CCCCEEEEEEECCCC-CCCEEEEEE--------
T ss_pred cceeccc----cCCC--------------------------------CCCceEEEEEEeccCCCCCEEEEEc--------
Confidence 222221 1110 112334555 556776544432
Q ss_pred eeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEcc---CCCEEEEEeCCCCEEEEEEeeCCCCCceeee--ecCCCC
Q psy4771 219 FEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSA---DESFVIVAETMSSRVHRYYLKGPKQGKSEVF--IDGLPG 293 (337)
Q Consensus 219 ~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~---dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~--~~~~~g 293 (337)
.+|.|..+|..+++.......-.....++++| +++.|+++. ..+.|..+++..........+ .....+
T Consensus 188 ------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 260 (357)
T 3i2n_A 188 ------DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDMRTQHPTKGFASVSEKAHKS 260 (357)
T ss_dssp ------TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEEEEEETTTEEEEEEEECCSS
T ss_pred ------cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCCcccceeeeccCCCcC
Confidence 24688888988887655544455678999999 887776664 567899999864322111110 011223
Q ss_pred CCCceeECCCCC
Q psy4771 294 LPDNVKRDSKGN 305 (337)
Q Consensus 294 ~Pdgi~~d~dG~ 305 (337)
....+++.++|.
T Consensus 261 ~v~~~~~~~~~~ 272 (357)
T 3i2n_A 261 TVWQVRHLPQNR 272 (357)
T ss_dssp CEEEEEEETTEE
T ss_pred CEEEEEECCCCC
Confidence 356677777776
No 238
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.44 E-value=0.0064 Score=54.68 Aligned_cols=146 Identities=9% Similarity=-0.031 Sum_probs=87.8
Q ss_pred CcceEEECCCCcEEEEECCC-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCC
Q psy4771 113 RPLGIKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKP 191 (337)
Q Consensus 113 ~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~ 191 (337)
....++++++|+++++-... .|..+|.++++...+... .+ .-
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~----~~---------------------------------h~ 52 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL----KE---------------------------------HN 52 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE----EC---------------------------------CS
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee----cC---------------------------------CC
Confidence 35689999999766665444 477788877753222210 11 12
Q ss_pred CCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE---eccccceeeEEEccCCCEEEEEeCCC
Q psy4771 192 QIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL---IANLHFANGVELSADESFVIVAETMS 268 (337)
Q Consensus 192 ~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~---~~~~~~p~gia~~~dg~~lyva~~~~ 268 (337)
...++++++++|++.++-.. +|.|..+|..+++.... ...-.....++++++++.|+++.. .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~--------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d 117 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGT--------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG-S 117 (372)
T ss_dssp SCEEEEEEETTTTEEEEEET--------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET-T
T ss_pred CcccEEEEeCCCCEEEEEcC--------------CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC-C
Confidence 24688999999875554332 34666677666653222 223445789999999987777664 5
Q ss_pred CEEEEEEeeCCCCCc-eeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 269 SRVHRYYLKGPKQGK-SEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 269 ~~I~~~~~~g~~~~~-~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
+.|..++++...... ...+..........+++.++|+++++.
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 678888887542111 122222223345678888888755544
No 239
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.44 E-value=0.034 Score=55.80 Aligned_cols=194 Identities=9% Similarity=0.054 Sum_probs=100.0
Q ss_pred eCCeEE-EEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECC---------CcEEEE
Q psy4771 71 HKGDLY-MGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAY---------FGLYKV 137 (337)
Q Consensus 71 ~~g~ly-~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~---------~gv~~v 137 (337)
.++.++ ++ ++.|..|+. ++...+.. +... ........++.++|||+ |+++... ..++.+
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSSVFLE-NSTF-----DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEEEEEC-TTTT-----TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceEEEEe-chhh-----hhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 355544 55 889999986 33332211 1110 01111234689999995 4444321 126789
Q ss_pred EcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc---cccceeeecccc--------CCCC----------------
Q psy4771 138 NVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG---QTEQLISMDTEI--------DGAK---------------- 190 (337)
Q Consensus 138 d~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~---~~~~v~~~~~~~--------~~~~---------------- 190 (337)
|.++++.+.+... .+. -...+.+|||+.+ ....|...+... ++..
T Consensus 98 d~~~~~~~~l~~~----~~~----~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 98 DLNKRQLITEERI----PNN----TQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp ETTTTEECCSSCC----CTT----EEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred ECCCCcEEEcccC----CCc----ceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 9998887665421 111 1346678888876 223343333110 0100
Q ss_pred CCCCccEEEcCCCc-EEEEcC-CCCccC--------------ceeeee------ecCCccEEEEcCCC---C---eeEEE
Q psy4771 191 PQIPNSVTVDSDGM-VYWSDS-STKYKS--------------GLFEGL------TSGSGRLIQYNPKT---K---KNKVL 242 (337)
Q Consensus 191 ~~~pn~v~vd~~G~-lyvtd~-~~~~~~--------------~~~~~~------~~~~G~v~~~d~~~---~---~~~~~ 242 (337)
+.....++++|||+ |.++.. ....+. ....+. ......|+.+|.++ + +...+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 12234588999997 555421 110000 000010 11223789999988 7 44444
Q ss_pred ec------cccceeeEEEccCCCEEE-EEeCCC--CEEEEEEeeCCC
Q psy4771 243 IA------NLHFANGVELSADESFVI-VAETMS--SRVHRYYLKGPK 280 (337)
Q Consensus 243 ~~------~~~~p~gia~~~dg~~ly-va~~~~--~~I~~~~~~g~~ 280 (337)
.. .-.....++++|||+.++ +..... ..|+.+++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 32 233456789999997443 334333 368888887653
No 240
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.44 E-value=0.053 Score=47.79 Aligned_cols=102 Identities=19% Similarity=0.221 Sum_probs=62.6
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEE
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVH 272 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~ 272 (337)
..+.++++++|++.++-.. +|.|..+|..+++.......-.....+++++++..+..+. .+.|.
T Consensus 217 ~v~~~~~s~~~~~l~s~s~--------------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--d~~i~ 280 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGK--------------DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIK 280 (340)
T ss_dssp CEEEEEECTTSSEEEEEET--------------TCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEE--TTEEE
T ss_pred cEEEEEECCCCCEEEEEeC--------------CCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccC--CCEEE
Confidence 3578999999986655432 4578888887776555555555678899999886444443 57888
Q ss_pred EEEeeCCCCCc---eee---eecCCCCCCCceeECCCCCEEEEe
Q psy4771 273 RYYLKGPKQGK---SEV---FIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 273 ~~~~~g~~~~~---~~~---~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
.+++++..... ... .....++....++++++|++.++.
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 88875431100 000 001112234567889999866654
No 241
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.42 E-value=0.0029 Score=57.42 Aligned_cols=185 Identities=8% Similarity=-0.057 Sum_probs=96.3
Q ss_pred ccEEEe-eC-CeEEEEecCcEEEEEeCCcee---EEEecCccccCccccCccCCcceEEECCCCcE-EEEECCCcEEEEE
Q psy4771 65 PEAVVK-HK-GDLYMGVDGGHILKLSGGKLV---PVVKLGKDCYGFKYEQQCGRPLGIKFDKNGAL-HVADAYFGLYKVN 138 (337)
Q Consensus 65 P~~i~~-~~-g~ly~d~~~g~I~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~l-yVad~~~gv~~vd 138 (337)
-.++++ .+ ..|.+...++.|..|+..... ....+. ........+++.++|++ +.+.....|...|
T Consensus 58 v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 128 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL---------RLNRAATFVRWSPNEDKFAVGSGARVISVCY 128 (377)
T ss_dssp EEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECC---------CCSSCEEEEECCTTSSCCEEEESSSCEEECC
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec---------ccCCceEEEEECCCCCEEEEEecCCeEEEEE
Confidence 345666 34 456688888988888753221 222221 22245678999999854 4444334477767
Q ss_pred cCCCe----EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCc
Q psy4771 139 VTTGQ----TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKY 214 (337)
Q Consensus 139 ~~~g~----~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~ 214 (337)
.++++ ...+.. ..-...+.+++.++|.+.++-..
T Consensus 129 ~~~~~~~~~~~~~~~---------------------------------------~h~~~v~~~~~~~~~~~l~~~~~--- 166 (377)
T 3dwl_C 129 FEQENDWWVSKHLKR---------------------------------------PLRSTILSLDWHPNNVLLAAGCA--- 166 (377)
T ss_dssp C-----CCCCEEECS---------------------------------------SCCSCEEEEEECTTSSEEEEEES---
T ss_pred ECCcccceeeeEeec---------------------------------------ccCCCeEEEEEcCCCCEEEEEeC---
Confidence 66553 222211 01234678888888875544332
Q ss_pred cCceeeeeecCCccEEEEcCCC------------------CeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEe
Q psy4771 215 KSGLFEGLTSGSGRLIQYNPKT------------------KKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYL 276 (337)
Q Consensus 215 ~~~~~~~~~~~~G~v~~~d~~~------------------~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~ 276 (337)
+|.|..+|... ++.............++++||++.|+.+. ..+.|..+++
T Consensus 167 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~ 234 (377)
T 3dwl_C 167 -----------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYP 234 (377)
T ss_dssp -----------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEE
T ss_pred -----------CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEEC
Confidence 23455555321 11111112333467899999998666554 4678999998
Q ss_pred eCCCCCc--eeeeecCCCCCCCceeECCCCCEEEEecCC
Q psy4771 277 KGPKQGK--SEVFIDGLPGLPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 277 ~g~~~~~--~~~~~~~~~g~Pdgi~~d~dG~l~va~~~~ 313 (337)
....... ...+.. ..+....+++.++|++.++....
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 235 SAPEQPPRALITVKL-SQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CSTTSCEEECCCEEC-SSSCEEEEEEEETTEEEEEESSS
T ss_pred CCCCCcceeeEeecC-CCCceEEEEEcCCCCEEEEEcCC
Confidence 7543210 111111 22234678888888766665433
No 242
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.38 E-value=0.0056 Score=60.13 Aligned_cols=187 Identities=13% Similarity=0.108 Sum_probs=100.7
Q ss_pred CccEEEe-eCC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcC
Q psy4771 64 GPEAVVK-HKG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~-~~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~ 140 (337)
.|..+++ .+| .|.+.. ++.|..++..+......+. ........++|+|+|+++++-...+ |...|..
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~---------~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT---------EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 89 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEEC---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEec---------CCCCceEEEEECCCCcEEEEEeCCCCEEEeECC
Confidence 3445555 344 444443 4577777753221111121 1223467899999997766654444 7777765
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
+++...... ..+ --...++++++++|...++-...+
T Consensus 90 ~~~~~~~~~----~~~---------------------------------~~~~v~~v~fs~dg~~l~~~~~~~------- 125 (611)
T 1nr0_A 90 QTTHILKTT----IPV---------------------------------FSGPVKDISWDSESKRIAAVGEGR------- 125 (611)
T ss_dssp STTCCEEEE----EEC---------------------------------SSSCEEEEEECTTSCEEEEEECCS-------
T ss_pred CCcceeeEe----ecc---------------------------------cCCceEEEEECCCCCEEEEEECCC-------
Confidence 432111110 000 012368899999998544332211
Q ss_pred eeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR 300 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~ 300 (337)
+..|.|+.+|.. .....+...-...+.++++|++...+++-...+.|..++....+ ....+. +..+....+++
T Consensus 126 ---~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~-~H~~~V~~v~f 198 (611)
T 1nr0_A 126 ---ERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFG-EHTKFVHSVRY 198 (611)
T ss_dssp ---SCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEEC-CCSSCEEEEEE
T ss_pred ---CceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--Eeeeec-cccCceEEEEE
Confidence 113467777632 22222333344678999999987666776677888888753211 112222 22233567888
Q ss_pred CCCCCEEEEec
Q psy4771 301 DSKGNFLVSLV 311 (337)
Q Consensus 301 d~dG~l~va~~ 311 (337)
.++|++.++..
T Consensus 199 spdg~~las~s 209 (611)
T 1nr0_A 199 NPDGSLFASTG 209 (611)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 88888666544
No 243
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.38 E-value=0.065 Score=47.19 Aligned_cols=176 Identities=11% Similarity=-0.006 Sum_probs=96.1
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCC-eEEEEec
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTG-QTEQLIS 149 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g-~~~~l~~ 149 (337)
+..+.+...++.|..|+..+...+..+. ........+++.+++.++++-...+ |...|.+++ .......
T Consensus 67 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFE---------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEe---------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc
Confidence 4556688999999999874333332221 1224467899999997666654444 777887655 3332221
Q ss_pred cccccCCCCCCCCCceeeCC-CCCcc----cccceeeeccccCCC-------CCCCCccEEEcC--CCcEEEEcCCCCcc
Q psy4771 150 MDTEIDGAKPQIPNSVTVDS-DGQTG----QTEQLISMDTEIDGA-------KPQIPNSVTVDS--DGMVYWSDSSTKYK 215 (337)
Q Consensus 150 ~~~~~~g~~~~~P~~v~~~~-~g~~~----~~~~v~~~~~~~~~~-------~~~~pn~v~vd~--~G~lyvtd~~~~~~ 215 (337)
. ..+ .-..+++++ +++++ .++.|...+...... .....+.+.+.+ ++.+.++
T Consensus 138 ~---h~~----~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s------- 203 (304)
T 2ynn_A 138 G---HEH----FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT------- 203 (304)
T ss_dssp C---CCS----CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE-------
T ss_pred c---cCC----cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE-------
Confidence 0 111 123466776 45544 223333332110000 001122233332 2332222
Q ss_pred CceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 216 SGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 216 ~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
...+|.|..+|..+++..... ........++++|+++. +++-...+.|..++...
T Consensus 204 -------~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 204 -------ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST 259 (304)
T ss_dssp -------EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT
T ss_pred -------EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE-EEEEcCCCeEEEEECCC
Confidence 334678888888877654333 33455678999999974 44555567888888654
No 244
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.015 Score=52.18 Aligned_cols=179 Identities=11% Similarity=0.043 Sum_probs=97.0
Q ss_pred cEEEe-e---CCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCC--CcEEEEECCC-cEEE
Q psy4771 66 EAVVK-H---KGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN--GALHVADAYF-GLYK 136 (337)
Q Consensus 66 ~~i~~-~---~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~--G~lyVad~~~-gv~~ 136 (337)
.++++ . +..+++...+|.|..|+. ++...+..+. ........+++.++ |+++++-... .|..
T Consensus 59 ~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 59 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA---------VHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC---------CCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec---------CCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 45555 2 455668888998888875 3322332221 12245778999998 7555554444 4777
Q ss_pred EEcCCCe---EEEEeccccccCCCCCCCCCceeeCC-------------CCCcc----cccceeeeccc-----------
Q psy4771 137 VNVTTGQ---TEQLISMDTEIDGAKPQIPNSVTVDS-------------DGQTG----QTEQLISMDTE----------- 185 (337)
Q Consensus 137 vd~~~g~---~~~l~~~~~~~~g~~~~~P~~v~~~~-------------~g~~~----~~~~v~~~~~~----------- 185 (337)
+|..++. ...+.. ... .-..+++++ +++++ .++.|...+..
T Consensus 130 ~d~~~~~~~~~~~~~~----~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 201 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDA----HAI----GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 201 (379)
T ss_dssp EECCTTSCCCEEEEEC----CTT----CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred EecCCCCceeeEEecC----CCC----ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE
Confidence 7776552 111111 111 113345555 45555 22333333211
Q ss_pred cCCCCCCCCccEEEcCC---CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCe---eEEEec---cccceeeEEEcc
Q psy4771 186 IDGAKPQIPNSVTVDSD---GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK---NKVLIA---NLHFANGVELSA 256 (337)
Q Consensus 186 ~~~~~~~~pn~v~vd~~---G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~---~~~~~~---~~~~p~gia~~~ 256 (337)
+.+ .-...++++++++ |.+.++-.. +|.|..+|..+++ ...+.. .......+++++
T Consensus 202 ~~~-h~~~v~~~~~sp~~~~~~~l~s~~~--------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 202 LEG-HSDWVRDVAWSPTVLLRSYLASVSQ--------------DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL 266 (379)
T ss_dssp ECC-CSSCEEEEEECCCCSSSEEEEEEET--------------TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS
T ss_pred Eec-ccCcEeEEEECCCCCCCCeEEEEeC--------------CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC
Confidence 111 1234678888888 665544332 4566666655542 112222 233457899999
Q ss_pred CCCEEEEEeCCCCEEEEEEee
Q psy4771 257 DESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 257 dg~~lyva~~~~~~I~~~~~~ 277 (337)
|++.|+++.. .+.|..++++
T Consensus 267 ~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 267 SGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp SSCCEEEEES-SSSEEEEEEE
T ss_pred CCCEEEEecC-CCcEEEEeCC
Confidence 9987776655 5678777775
No 245
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.36 E-value=0.02 Score=51.04 Aligned_cols=145 Identities=10% Similarity=0.030 Sum_probs=89.6
Q ss_pred CeEEEEecCcEEEEEeCC--c-eeEEEecCccccCccccCccCCcceEEECCC----CcEEEEECCCc-EEEEEcCCCeE
Q psy4771 73 GDLYMGVDGGHILKLSGG--K-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN----GALHVADAYFG-LYKVNVTTGQT 144 (337)
Q Consensus 73 g~ly~d~~~g~I~~~~~~--~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~----G~lyVad~~~g-v~~vd~~~g~~ 144 (337)
..+++...+++|..|+.. + ...+..+.. .........+++.++ |+++++-...+ |..+|..+++.
T Consensus 35 ~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 107 (366)
T 3k26_A 35 PLVFATVGSNRVTLYECHSQGEIRLLQSYVD-------ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC 107 (366)
T ss_dssp CEEEEEEETTEEEEEEECGGGCEEEEEEEEC-------SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE
T ss_pred ceEEEECCCCEEEEEEcCCCcEEEeeeeccc-------cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE
Confidence 446677777888888753 2 222221110 012244678899888 54544433444 88888876654
Q ss_pred EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCCCCccCceeeeee
Q psy4771 145 EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 145 ~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
..... + .-...+++++.+ ++++.++-..
T Consensus 108 ~~~~~------~---------------------------------~~~~i~~~~~~~~~~~~l~s~~~------------ 136 (366)
T 3k26_A 108 IKHYV------G---------------------------------HGNAINELKFHPRDPNLLLSVSK------------ 136 (366)
T ss_dssp EEEEE------S---------------------------------CCSCEEEEEECSSCTTEEEEEET------------
T ss_pred eeeec------C---------------------------------CCCcEEEEEECCCCCCEEEEEeC------------
Confidence 43322 0 123467889998 7775554432
Q ss_pred cCCccEEEEcCCCCeeEEEe----ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 224 SGSGRLIQYNPKTKKNKVLI----ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~~~~~~----~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..+++..... ..-.....++++++++.|+.+.. .+.|..+++..
T Consensus 137 --dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 192 (366)
T 3k26_A 137 --DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM-DHSLKLWRINS 192 (366)
T ss_dssp --TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET-TSCEEEEESCS
T ss_pred --CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecC-CCCEEEEECCC
Confidence 468888888877665444 23456789999999987766654 57888888763
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.36 E-value=0.0053 Score=54.58 Aligned_cols=178 Identities=13% Similarity=-0.010 Sum_probs=98.8
Q ss_pred cEEEe-e-CCeEEEEecCcEEEEEeC--Cc-ee-EEEecCccccCccccCccCCcceEEECCCCc-EEEE-ECCCcEEEE
Q psy4771 66 EAVVK-H-KGDLYMGVDGGHILKLSG--GK-LV-PVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVA-DAYFGLYKV 137 (337)
Q Consensus 66 ~~i~~-~-~g~ly~d~~~g~I~~~~~--~~-~~-~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVa-d~~~gv~~v 137 (337)
.++++ . +..+++...++.|..|+. ++ .. ..... ........+++.++|+ ++++ .....|..+
T Consensus 15 ~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL----------RYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE----------ECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee----------ecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 34555 2 445668888898888764 33 11 11111 1224567899999998 4444 433448888
Q ss_pred Ec-CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccC
Q psy4771 138 NV-TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKS 216 (337)
Q Consensus 138 d~-~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~ 216 (337)
|. ++++...+... . .-.....+++.+ +..+++...
T Consensus 85 d~~~~~~~~~~~~~-----~---------------------------------~~~~v~~l~~~~-~~~l~s~~~----- 120 (342)
T 1yfq_A 85 DLIGSPSFQALTNN-----E---------------------------------ANLGICRICKYG-DDKLIAASW----- 120 (342)
T ss_dssp CSSSSSSEEECBSC-----C---------------------------------CCSCEEEEEEET-TTEEEEEET-----
T ss_pred EeccCCceEecccc-----C---------------------------------CCCceEEEEeCC-CCEEEEEcC-----
Confidence 88 77766443210 0 012357788888 665444332
Q ss_pred ceeeeeecCCccEEEEcCCC---------CeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC-CCCCceee
Q psy4771 217 GLFEGLTSGSGRLIQYNPKT---------KKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG-PKQGKSEV 286 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~---------~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g-~~~~~~~~ 286 (337)
+|.|..+|..+ ++.......-.....+++++++ ++++ ...+.|..+++.. ........
T Consensus 121 ---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~~~ 188 (342)
T 1yfq_A 121 ---------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGTIE 188 (342)
T ss_dssp ---------TSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCEEE
T ss_pred ---------CCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccceee
Confidence 34666666543 2211112233456789998876 5554 4467899999865 32211111
Q ss_pred eecCCCCCCCceeECC-CCCEEEEe
Q psy4771 287 FIDGLPGLPDNVKRDS-KGNFLVSL 310 (337)
Q Consensus 287 ~~~~~~g~Pdgi~~d~-dG~l~va~ 310 (337)
..........+++.+ +|+++++.
T Consensus 189 -~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 189 -ESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp -ECSCSSCEEEEEECSGGGCEEEEE
T ss_pred -ecCCCCceeEEEECCCCCCEEEEE
Confidence 222333467788888 88755444
No 247
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.31 E-value=0.015 Score=56.01 Aligned_cols=101 Identities=14% Similarity=0.220 Sum_probs=64.6
Q ss_pred CCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEec--cccceeeEEEcc----------CCC
Q psy4771 192 QIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIA--NLHFANGVELSA----------DES 259 (337)
Q Consensus 192 ~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~--~~~~p~gia~~~----------dg~ 259 (337)
.....++++++|++.++-.. +|.|..+|..+++...... .......++++| |++
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~--------------dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDV--------------MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp SCEEEEEECTTSSEEEEEET--------------TSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred CceEEEEECCCCCEEEEcCC--------------CCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 34688999999885554432 4688888888776544333 344578999999 997
Q ss_pred EEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 260 FVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 260 ~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
.|..+. ..+.|..++++... .....+. ...+....+++.++|+ .++.
T Consensus 555 ~l~~~~-~dg~i~iw~~~~~~-~~~~~~~-~h~~~v~~l~~s~~~~-l~s~ 601 (615)
T 1pgu_A 555 LVATGS-LDTNIFIYSVKRPM-KIIKALN-AHKDGVNNLLWETPST-LVSS 601 (615)
T ss_dssp EEEEEE-TTSCEEEEESSCTT-CCEEETT-SSTTCEEEEEEEETTE-EEEE
T ss_pred EEEEEc-CCCcEEEEECCCCc-eechhhh-cCccceEEEEEcCCCC-eEEe
Confidence 665554 45789999986431 1122222 1223356788888888 4443
No 248
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.30 E-value=0.039 Score=54.83 Aligned_cols=173 Identities=16% Similarity=0.138 Sum_probs=102.6
Q ss_pred eEEEEecCcEEEEEeCCc-----eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEE
Q psy4771 74 DLYMGVDGGHILKLSGGK-----LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQL 147 (337)
Q Consensus 74 ~ly~d~~~g~I~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l 147 (337)
.|.+...++.|..|+..+ ......+. ........+++.++|+++++-+..+ |...|..+++....
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~---------~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~ 467 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLT---------GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR 467 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEE---------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceec---------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE
Confidence 455888999888887521 11111111 2224467899999997766654444 88888877754433
Q ss_pred eccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCc
Q psy4771 148 ISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSG 227 (337)
Q Consensus 148 ~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G 227 (337)
.. + .-....+++++++|+..++-+. +|
T Consensus 468 ~~------~---------------------------------h~~~v~~~~~s~~~~~l~s~s~--------------D~ 494 (694)
T 3dm0_A 468 FV------G---------------------------------HTKDVLSVAFSLDNRQIVSASR--------------DR 494 (694)
T ss_dssp EE------C---------------------------------CSSCEEEEEECTTSSCEEEEET--------------TS
T ss_pred Ee------C---------------------------------CCCCEEEEEEeCCCCEEEEEeC--------------CC
Confidence 21 1 1123578889998875554432 34
Q ss_pred cEEEEcCCCCeeEEEec----cccceeeEEEccCCC-EEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECC
Q psy4771 228 RLIQYNPKTKKNKVLIA----NLHFANGVELSADES-FVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 228 ~v~~~d~~~~~~~~~~~----~~~~p~gia~~~dg~-~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
.|..+|..+.....+.. .....+.+++++++. .++++-...+.|..+++..... ...+. +..+....+++++
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~-~h~~~v~~v~~sp 571 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLA-GHTGYVSTVAVSP 571 (694)
T ss_dssp CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECT
T ss_pred EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEc-CCCCCEEEEEEeC
Confidence 67677765443322322 123467899999863 3556666678898888754321 12222 2234456788999
Q ss_pred CCCEEEEec
Q psy4771 303 KGNFLVSLV 311 (337)
Q Consensus 303 dG~l~va~~ 311 (337)
+|++.++..
T Consensus 572 dg~~l~sg~ 580 (694)
T 3dm0_A 572 DGSLCASGG 580 (694)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 998666554
No 249
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.26 E-value=0.012 Score=53.10 Aligned_cols=144 Identities=10% Similarity=-0.001 Sum_probs=78.5
Q ss_pred CcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCC
Q psy4771 113 RPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKP 191 (337)
Q Consensus 113 ~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~ 191 (337)
....++++++|+++++-...+ |...|.+++....... ...| --
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~---~~~~---------------------------------h~ 61 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV---LSEG---------------------------------HQ 61 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE---ECSS---------------------------------CS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee---eccc---------------------------------cC
Confidence 456899999997666644444 7667766654322111 0111 12
Q ss_pred CCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccCCCEEEEEeCCC
Q psy4771 192 QIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSADESFVIVAETMS 268 (337)
Q Consensus 192 ~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~ 268 (337)
...+.++++++|+..++-.. +|.+..+|..++.. ..+...-...+.++++|+++.|+.+. ..
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~--------------D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-~D 126 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASF--------------DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-RD 126 (345)
T ss_dssp SCEEEEEECTTSSEEEEEET--------------TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-TT
T ss_pred CcEEEEEECCCCCEEEEEEC--------------CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-CC
Confidence 34678999999986555432 23444444333322 22223334568999999998655544 45
Q ss_pred CEEEEEEeeCCCCCc-eeeeecCCCCCCCceeECCCCCEEE
Q psy4771 269 SRVHRYYLKGPKQGK-SEVFIDGLPGLPDNVKRDSKGNFLV 308 (337)
Q Consensus 269 ~~I~~~~~~g~~~~~-~~~~~~~~~g~Pdgi~~d~dG~l~v 308 (337)
+.|..++++...... ...+.. .......+++.++|.+.+
T Consensus 127 ~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 127 KSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp SCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEE
T ss_pred CeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEE
Confidence 788888886432111 112211 122234566677765433
No 250
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.26 E-value=0.018 Score=51.45 Aligned_cols=70 Identities=7% Similarity=-0.034 Sum_probs=40.9
Q ss_pred CccEEEcCCCcEEEEcCCCCccCceeeeeecC-CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCC-----
Q psy4771 194 PNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSG-SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETM----- 267 (337)
Q Consensus 194 pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~-~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~----- 267 (337)
...+++++|| ++++.....-. .... ...|+.+| +++.+.+..+ ... ..++|||+.|+++...
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~------~~~~~~~~l~~~d--~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~ 240 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREII------PQYFKFWDIYIWE--DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYM 240 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSS------CCSSCCEEEEEEE--TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCC
T ss_pred cccccCCCCe-EEEEEeccccc------ccccccccEEEeC--CCceEEeccC-cce--eeECCCCCEEEEEEccccCCc
Confidence 4678888999 66654321100 0001 34788888 6766665544 222 2338999988665533
Q ss_pred --CCEEEEEE
Q psy4771 268 --SSRVHRYY 275 (337)
Q Consensus 268 --~~~I~~~~ 275 (337)
..+|+.++
T Consensus 241 ~~~~~l~~~d 250 (347)
T 2gop_A 241 SEHNKLYIYD 250 (347)
T ss_dssp CSSCEEEEEC
T ss_pred cccceEEEEC
Confidence 35788887
No 251
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.25 E-value=0.12 Score=47.70 Aligned_cols=84 Identities=8% Similarity=-0.009 Sum_probs=57.0
Q ss_pred CCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC-CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCC
Q psy4771 225 GSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET-MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK 303 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~-~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~d 303 (337)
.++.|..+|..+++.............++++++++.++++.. ..+.|..+++...+ ....+. +..+....+++.+|
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~-gH~~~V~~l~~spd 375 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELK-GHTSRVLSLTMSPD 375 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTT
T ss_pred CCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCC
Confidence 356888889888877666666667788999999998887754 46788888875321 122222 22233567889999
Q ss_pred CCEEEEec
Q psy4771 304 GNFLVSLV 311 (337)
Q Consensus 304 G~l~va~~ 311 (337)
|.+.++..
T Consensus 376 g~~l~S~s 383 (420)
T 4gga_A 376 GATVASAA 383 (420)
T ss_dssp SSCEEEEE
T ss_pred CCEEEEEe
Confidence 98555543
No 252
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.087 Score=46.98 Aligned_cols=152 Identities=13% Similarity=0.092 Sum_probs=82.9
Q ss_pred EEEeeCCeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCe
Q psy4771 67 AVVKHKGDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQ 143 (337)
Q Consensus 67 ~i~~~~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~ 143 (337)
++.+..+.|.+...++.|..|+.. .......+.. .........+++.++|+++++-...+ |...|.++..
T Consensus 19 ~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~-------~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~ 91 (330)
T 2hes_X 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDE-------TAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESA 91 (330)
T ss_dssp EEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECT-------TCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC----
T ss_pred eeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEec-------CCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCc
Confidence 445544566688889988888752 2222222210 01223467899999997766654444 6666654221
Q ss_pred E-----EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCce
Q psy4771 144 T-----EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGL 218 (337)
Q Consensus 144 ~-----~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~ 218 (337)
. ..+.. ..| --...++++++++|+..++-..
T Consensus 92 ~~~~~~~~~~~----~~~---------------------------------h~~~V~~v~~sp~g~~las~s~------- 127 (330)
T 2hes_X 92 DRTFEMDLLAI----IEG---------------------------------HENEVKGVAWSNDGYYLATCSR------- 127 (330)
T ss_dssp ---CCCEEEEE----EC-------------------------------------CEEEEEECTTSCEEEEEET-------
T ss_pred CccccceeEEE----EcC---------------------------------CCCcEEEEEECCCCCEEEEEeC-------
Confidence 0 11100 011 1134678999999886655433
Q ss_pred eeeeecCCccEEEEcCC-CC---ee-EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEee
Q psy4771 219 FEGLTSGSGRLIQYNPK-TK---KN-KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLK 277 (337)
Q Consensus 219 ~~~~~~~~G~v~~~d~~-~~---~~-~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~ 277 (337)
+|.|..+|.. .+ +. ..+...-...+.++++|+++.|.. -...+.|..++..
T Consensus 128 -------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s-~s~D~~i~iW~~~ 183 (330)
T 2hes_X 128 -------DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS-SSYDDTVRIWKDY 183 (330)
T ss_dssp -------TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE-EETTSCEEEEEEE
T ss_pred -------CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE-EcCCCeEEEEECC
Confidence 3466666653 22 11 223333445688999999975544 4455677777764
No 253
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.24 E-value=0.039 Score=48.66 Aligned_cols=137 Identities=9% Similarity=-0.004 Sum_probs=78.6
Q ss_pred EEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccC
Q psy4771 77 MGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEID 155 (337)
Q Consensus 77 ~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~ 155 (337)
+...++.|..|+.........+. ...+....++++++|+++++-...+ |...|..+++......
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~------ 254 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHI---------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------ 254 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE------
T ss_pred EEcCCCEEEEEECCCCceeeEec---------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec------
Confidence 66677777777764333332221 1223467899999997766644444 7778887665433322
Q ss_pred CCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCC
Q psy4771 156 GAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPK 235 (337)
Q Consensus 156 g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~ 235 (337)
.....+.+++.+++.+..+.. +|.|..+|.+
T Consensus 255 ----------------------------------~~~~v~~~~~~~~~~~~~~~~---------------d~~i~iwd~~ 285 (340)
T 4aow_A 255 ----------------------------------GGDIINALCFSPNRYWLCAAT---------------GPSIKIWDLE 285 (340)
T ss_dssp ----------------------------------CSSCEEEEEECSSSSEEEEEE---------------TTEEEEEETT
T ss_pred ----------------------------------CCceEEeeecCCCCceeeccC---------------CCEEEEEECC
Confidence 112345666777666543322 2355555655
Q ss_pred CCeeEEEe----------ccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 236 TKKNKVLI----------ANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 236 ~~~~~~~~----------~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
++...... ......+.++++|||+.|+.+. ..+.|..++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~v~iW~~~t 337 (340)
T 4aow_A 286 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNLVRVWQVTI 337 (340)
T ss_dssp TTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEC
T ss_pred CCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCC
Confidence 44332111 1123457899999998666554 457788888763
No 254
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.23 E-value=0.003 Score=53.75 Aligned_cols=110 Identities=11% Similarity=0.084 Sum_probs=69.2
Q ss_pred CCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKP 191 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~ 191 (337)
.....|+++|+|.||.+. ...++++++.+..-.........+ |. ...
T Consensus 41 ~~~~~laf~P~G~LYaV~-~G~Ly~~~~~t~~~~~W~~s~t~I-G~-------------------------------~Gw 87 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGVL-NDKIYKGTPPTHDNDNWMGRAKKI-GN-------------------------------GGW 87 (236)
T ss_dssp TTCSEEEECTTSCEEEEE-TTEEEEESCCCSTTCCHHHHCEEE-EC-------------------------------SCG
T ss_pred ccceeEEECCCccEEEEe-CCeEEEECCCCCCcccccccccEe-cc-------------------------------ccc
Confidence 346699999999999993 344999998653222222110000 00 022
Q ss_pred CCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCe-------eEEEe-ccccceeeEEEccCCCEEEE
Q psy4771 192 QIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK-------NKVLI-ANLHFANGVELSADESFVIV 263 (337)
Q Consensus 192 ~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~-------~~~~~-~~~~~p~gia~~~dg~~lyv 263 (337)
+....+.+|++|.||.+. +|.|||+++.+.. .+.+- .+...-.-|.++|+| .||.
T Consensus 88 ~~F~a~~fD~~G~LYav~----------------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lya 150 (236)
T 1tl2_A 88 NQFQFLFFDPNGYLYAVS----------------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYA 150 (236)
T ss_dssp GGCSEEEECTTSCEEEEE----------------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEE
T ss_pred ccceEEEECCCCCEEEeC----------------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCc-eEEE
Confidence 335789999999999772 3689999984321 11222 233344889999999 5998
Q ss_pred EeCCCCEEEE
Q psy4771 264 AETMSSRVHR 273 (337)
Q Consensus 264 a~~~~~~I~~ 273 (337)
.. .+++++
T Consensus 151 v~--dg~lyr 158 (236)
T 1tl2_A 151 VH--GQQFYK 158 (236)
T ss_dssp EE--TTEEEE
T ss_pred Ee--CCcEEe
Confidence 88 556766
No 255
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.045 Score=49.04 Aligned_cols=184 Identities=11% Similarity=0.005 Sum_probs=101.3
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccc
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMD 151 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~ 151 (337)
+..++++..+|.|..|+..+...+..+... . .....-.|.-+....|+.+.+-+....+..++..+++......
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~--~--v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~-- 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTITTP--N--PRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIE-- 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEEEE--C--CCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE--
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEecC--C--ceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEee--
Confidence 445568888998888875222111111100 0 0011223443444556666666655556666666555322221
Q ss_pred cccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC--CCcEEEEcCCCCccCceeeeeecCCccE
Q psy4771 152 TEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS--DGMVYWSDSSTKYKSGLFEGLTSGSGRL 229 (337)
Q Consensus 152 ~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~--~G~lyvtd~~~~~~~~~~~~~~~~~G~v 229 (337)
.. .-.....+++++ +|+++++-.. +|.|
T Consensus 122 --~~----------------------------------~~~~v~~~~~~~~~~~~~l~s~s~--------------dg~i 151 (343)
T 3lrv_A 122 --VD----------------------------------SANEIIYMYGHNEVNTEYFIWADN--------------RGTI 151 (343)
T ss_dssp --CC----------------------------------CSSCEEEEECCC---CCEEEEEET--------------TCCE
T ss_pred --cC----------------------------------CCCCEEEEEcCCCCCCCEEEEEeC--------------CCcE
Confidence 00 012357788888 7876654432 4578
Q ss_pred EEEcCCCCeeEEEecc--ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEE
Q psy4771 230 IQYNPKTKKNKVLIAN--LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFL 307 (337)
Q Consensus 230 ~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~ 307 (337)
..+|..+++....... ......++++|||+. +++-...+.|..+++....... ..+.....+....+++.++|.+.
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~-lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL-LALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEECTTSCE-EEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEE
Confidence 8888877766433322 224678999999974 4444556889999986432210 12222123446788999999866
Q ss_pred EEecCC
Q psy4771 308 VSLVCP 313 (337)
Q Consensus 308 va~~~~ 313 (337)
++....
T Consensus 230 ~s~~~~ 235 (343)
T 3lrv_A 230 VVECDQ 235 (343)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 665543
No 256
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.22 E-value=0.023 Score=51.48 Aligned_cols=144 Identities=9% Similarity=0.031 Sum_probs=81.9
Q ss_pred cceEEECC-CC-cEEEEECC------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccc
Q psy4771 114 PLGIKFDK-NG-ALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTE 185 (337)
Q Consensus 114 P~Gl~~d~-~G-~lyVad~~------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~ 185 (337)
...+.+.+ +| .|+++... ..|+.+|.++++.+.+... .
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~----~------------------------------ 235 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH----A------------------------------ 235 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC----C------------------------------
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc----C------------------------------
Confidence 55788888 66 46554322 2488888876665544320 0
Q ss_pred cCCCCCCCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEcc-CCCEEEE
Q psy4771 186 IDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSA-DESFVIV 263 (337)
Q Consensus 186 ~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~lyv 263 (337)
....+..+++++||+ |+++..... ...+.|+.+|.++++...+.. +...+ +++++ ||+.+++
T Consensus 236 ----~~~~~~~~~~spdg~~l~~~~~~~~----------~~~~~l~~~d~~~g~~~~l~~-~~~~~-~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 236 ----EGESCTHEFWIPDGSAMAYVSYFKG----------QTDRVIYKANPETLENEEVMV-MPPCS-HLMSNFDGSLMVG 299 (396)
T ss_dssp ----TTEEEEEEEECTTSSCEEEEEEETT----------TCCEEEEEECTTTCCEEEEEE-CCSEE-EEEECSSSSEEEE
T ss_pred ----CCccccceEECCCCCEEEEEecCCC----------CccceEEEEECCCCCeEEeee-CCCCC-CCccCCCCceEEE
Confidence 012356678999987 665532110 112359999998887655442 11223 88999 9986665
Q ss_pred EeC---------------CCCEEEEEEeeCCCCCceeeeecCCCC----------CCCceeECCCCC-EEEEe
Q psy4771 264 AET---------------MSSRVHRYYLKGPKQGKSEVFIDGLPG----------LPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 264 a~~---------------~~~~I~~~~~~g~~~~~~~~~~~~~~g----------~Pdgi~~d~dG~-l~va~ 310 (337)
+.. +...|++++++++.. ..+...... ....+++++||+ |+.+.
T Consensus 300 ~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 300 DGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp EECCC----------CCCCCCEEEEEETTTTBC---CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ecCCcceeeccccccccCCCCcEEEEecccCce---EEccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 432 346899998765432 222221110 134567888887 44333
No 257
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.21 E-value=0.048 Score=50.81 Aligned_cols=144 Identities=8% Similarity=0.144 Sum_probs=89.9
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEe
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLI 148 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~ 148 (337)
.++..+++...++.|..|+..+...+..+. ........++++++|+.+++-...+ |..+|..+++.....
T Consensus 278 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 278 GHGNIVVSGSYDNTLIVWDVAQMKCLYILS---------GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEec---------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 356677788899999999874433333332 1224467899999996655544444 888898777644333
Q ss_pred ccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCcc
Q psy4771 149 SMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGR 228 (337)
Q Consensus 149 ~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~ 228 (337)
. + .-.....++++ +...++- ..+|.
T Consensus 349 ~------~---------------------------------h~~~v~~~~~~--~~~l~s~--------------s~dg~ 373 (464)
T 3v7d_B 349 Q------G---------------------------------HTALVGLLRLS--DKFLVSA--------------AADGS 373 (464)
T ss_dssp C------C---------------------------------CSSCEEEEEEC--SSEEEEE--------------ETTSE
T ss_pred e------C---------------------------------CCCcEEEEEEc--CCEEEEE--------------eCCCc
Confidence 2 1 01224556665 3333222 23467
Q ss_pred EEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCC
Q psy4771 229 LIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 229 v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~ 279 (337)
|..+|..+++.............++++++++.|..+. .+.|..+++..+
T Consensus 374 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g 422 (464)
T 3v7d_B 374 IRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTC
T ss_pred EEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec--CCeEEEEECCCC
Confidence 8888887765444443444566789999998776665 679999997643
No 258
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.016 Score=59.80 Aligned_cols=149 Identities=16% Similarity=0.162 Sum_probs=90.4
Q ss_pred CccEEEe-eCCe-EEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCc-EEEEECCCcEEEEEcC
Q psy4771 64 GPEAVVK-HKGD-LYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGA-LHVADAYFGLYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~-~~g~-ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~ 140 (337)
...++++ .++. |.++..+|.|..|+.........+. .......++|.+ |+ |+.+.....|...|.+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~----------~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE----------DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS----------SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC----------CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 3456777 4554 5588999999999864433332221 123467899999 76 5555544558888887
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
+++...... . ....+.++++++|+..++-.
T Consensus 88 ~~~~~~~~~----~------------------------------------~~~V~~v~~sp~g~~l~sgs---------- 117 (902)
T 2oaj_A 88 SQKVLTTVF----V------------------------------------PGKITSIDTDASLDWMLIGL---------- 117 (902)
T ss_dssp TCSEEEEEE----C------------------------------------SSCEEEEECCTTCSEEEEEE----------
T ss_pred CCcEEEEEc----C------------------------------------CCCEEEEEECCCCCEEEEEc----------
Confidence 665432221 0 12357888889887443322
Q ss_pred eeecCCccEEEEcCCCCeeEEE------------eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 221 GLTSGSGRLIQYNPKTKKNKVL------------IANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~~~~------------~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.+|.|..+|.++++.... .........++++|++..++++-...+.| .+++..
T Consensus 118 ----~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~ 182 (902)
T 2oaj_A 118 ----QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE 182 (902)
T ss_dssp ----TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT
T ss_pred ----CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC
Confidence 245778888777664211 11123457899999754455555667788 888754
No 259
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.15 E-value=0.007 Score=54.18 Aligned_cols=99 Identities=10% Similarity=0.149 Sum_probs=62.4
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCC-----
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETM----- 267 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~----- 267 (337)
...++++|||+ |+++..... .....|+.+|.++++...+...-. ...++++|||+.|+++...
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~----------~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEE----------KKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDE 129 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETT----------TTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC--
T ss_pred CCCeEECCCCCEEEEEEeccC----------CCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcC
Confidence 45678999986 555432110 012368999988887766554333 7889999999988877532
Q ss_pred ---------------------CCEEEEEEeeCCCCCce-eeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 268 ---------------------SSRVHRYYLKGPKQGKS-EVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 268 ---------------------~~~I~~~~~~g~~~~~~-~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
..+|++++++++ .. ..+.. + ....+++.+|| ++++.
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~--~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK--P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTTT---EEEEEEEE--E-TTCEEEEETTE-EEEEE
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCCC---eEEeeecC--C-CcccccCCCCe-EEEEE
Confidence 356888887543 22 23322 2 35677788888 54444
No 260
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.11 E-value=0.013 Score=51.93 Aligned_cols=175 Identities=13% Similarity=0.045 Sum_probs=96.4
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeCCc---------eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEE
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSGGK---------LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLY 135 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~ 135 (337)
.++++ .++.+++...++.|..|+... ...+.. ......+.++++++++ ++++.....|.
T Consensus 105 ~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~-l~~~~~d~~i~ 173 (342)
T 1yfq_A 105 CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN----------TKVKNKIFTMDTNSSR-LIVGMNNSQVQ 173 (342)
T ss_dssp EEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS----------SSSCCCEEEEEECSSE-EEEEESTTEEE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeE----------EeeCCceEEEEecCCc-EEEEeCCCeEE
Confidence 45555 355666888888888887422 111111 1233567899999887 77776555688
Q ss_pred EEEcCC-CeE--EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcC-CCcEEEEcCC
Q psy4771 136 KVNVTT-GQT--EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 211 (337)
Q Consensus 136 ~vd~~~-g~~--~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~-~G~lyvtd~~ 211 (337)
.+|..+ +.. ..... . .-.....+++.+ +|..+++...
T Consensus 174 i~d~~~~~~~~~~~~~~-----~----------------------------------~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 174 WFRLPLCEDDNGTIEES-----G----------------------------------LKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EEESSCCTTCCCEEEEC-----S----------------------------------CSSCEEEEEECSGGGCEEEEEET
T ss_pred EEECCccccccceeeec-----C----------------------------------CCCceeEEEECCCCCCEEEEEec
Confidence 888765 321 11111 0 122467888988 8875544432
Q ss_pred CCccCceeeeeecCCccEEEEcCCCC------e-eEEEeccc---------cceeeEEEccCCCEEEEEeCCCCEEEEEE
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTK------K-NKVLIANL---------HFANGVELSADESFVIVAETMSSRVHRYY 275 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~------~-~~~~~~~~---------~~p~gia~~~dg~~lyva~~~~~~I~~~~ 275 (337)
+|.+..++.+.+ + ...+.... ...+.++++++++.|+.+. ..+.|..++
T Consensus 215 --------------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd 279 (342)
T 1yfq_A 215 --------------DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWN 279 (342)
T ss_dssp --------------TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEE
T ss_pred --------------CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEc
Confidence 234444333222 1 22222221 2578899999998666555 467899998
Q ss_pred eeCCCCCceeeeecCC-CCCCCceeECCCCCEEEEe
Q psy4771 276 LKGPKQGKSEVFIDGL-PGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 276 ~~g~~~~~~~~~~~~~-~g~Pdgi~~d~dG~l~va~ 310 (337)
+...+. ...+ ... .+....++ ++|++.++.
T Consensus 280 ~~~~~~--~~~~-~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 280 LQTRKK--IKNF-AKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp TTTTEE--EEEC-CCCSSSEEEEEE--ECSSEEEEE
T ss_pred CccHhH--hhhh-hcccCCCceEec--CCCCeEEEE
Confidence 753211 1111 111 22234566 788755544
No 261
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.11 E-value=0.0065 Score=59.48 Aligned_cols=88 Identities=22% Similarity=0.346 Sum_probs=57.3
Q ss_pred ccCccEEEe--eCCeEEEEec----------------------CcEEEEEeCC--c-------eeEEEecCcccc-----
Q psy4771 62 IHGPEAVVK--HKGDLYMGVD----------------------GGHILKLSGG--K-------LVPVVKLGKDCY----- 103 (337)
Q Consensus 62 ~~~P~~i~~--~~g~ly~d~~----------------------~g~I~~~~~~--~-------~~~~~~~g~~~~----- 103 (337)
+..||++.+ .++.+|+.+. .|+|+||.+. . +..+...+....
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 558999999 4789994322 3789999751 1 112222222110
Q ss_pred -----CccccCccCCcceEEECCCCcEEEEECC-------------CcEEEEEcCCCeEEEEec
Q psy4771 104 -----GFKYEQQCGRPLGIKFDKNGALHVADAY-------------FGLYKVNVTTGQTEQLIS 149 (337)
Q Consensus 104 -----~~~~~~~~~~P~Gl~~d~~G~lyVad~~-------------~gv~~vd~~~g~~~~l~~ 149 (337)
.......+..|-+|+||+.|+|||+.-. +.++..++.+|++++++.
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~ 526 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV 526 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe
Confidence 0111234678999999999999999532 127788888899888875
No 262
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.06 E-value=0.11 Score=48.24 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=47.7
Q ss_pred EEEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEE
Q psy4771 67 AVVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQ 146 (337)
Q Consensus 67 ~i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~ 146 (337)
++.++++.+++...+|.|..|+..+.+.+..+. ...+....+++.+++.|+.+.....|...|.++++...
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~---------~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLS---------GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC---------CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEe---------CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEE
Confidence 344467778899999999999864433333332 22345678999888866666544458888988776544
Q ss_pred E
Q psy4771 147 L 147 (337)
Q Consensus 147 l 147 (337)
.
T Consensus 198 ~ 198 (464)
T 3v7d_B 198 V 198 (464)
T ss_dssp E
T ss_pred E
Confidence 3
No 263
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.04 E-value=0.044 Score=54.69 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=36.9
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.|.|..+|+.+|++.--........+..+..+++.+|++ +..+.++.++...
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~t 507 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCC
Confidence 488999999999864433322234566677777788887 5678999999753
No 264
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.98 E-value=0.0036 Score=62.42 Aligned_cols=118 Identities=14% Similarity=0.035 Sum_probs=77.5
Q ss_pred cceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCC
Q psy4771 114 PLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQI 193 (337)
Q Consensus 114 P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~ 193 (337)
+.++.+.++|+++.+.....|+.+|.++++.+.+...... .-..
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~------------------------------------~~~~ 61 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTM------------------------------------KSVN 61 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHH------------------------------------HTTT
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccc------------------------------------cccc
Confidence 4478999999766665434599999998887776642100 0012
Q ss_pred CccEEEcCCCc-EEEEcCCC-CccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccCCCEEEEEeCCC
Q psy4771 194 PNSVTVDSDGM-VYWSDSST-KYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSADESFVIVAETMS 268 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~-~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~ 268 (337)
...++++|||+ |.++.... .+ .....+.|+.+|.++++. ..+. .....++++|||+.|.++. .
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~-------~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~--~ 129 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLW-------RYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY--Q 129 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECS-------SSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE--T
T ss_pred eeeEEECCCCCeEEEEecCceeE-------EeecceEEEEEECCCCccccceecC---cccccceECCCCCEEEEEE--C
Confidence 57889999997 55443211 00 011246899999988876 3332 3467799999999887775 4
Q ss_pred CEEEEEEeeCC
Q psy4771 269 SRVHRYYLKGP 279 (337)
Q Consensus 269 ~~I~~~~~~g~ 279 (337)
+.|+.+++.++
T Consensus 130 ~~i~~~~~~~g 140 (719)
T 1z68_A 130 NNIYLKQRPGD 140 (719)
T ss_dssp TEEEEESSTTS
T ss_pred CeEEEEeCCCC
Confidence 68888887643
No 265
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.98 E-value=0.06 Score=53.70 Aligned_cols=106 Identities=14% Similarity=0.095 Sum_probs=57.9
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCC------C--eeEEEeccccceeeEEEccCCCEEEEE
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT------K--KNKVLIANLHFANGVELSADESFVIVA 264 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~------~--~~~~~~~~~~~p~gia~~~dg~~lyva 264 (337)
..++++++||+ |+++..... +....|+.+|.++ + ....+......- .-.+++||+.||+.
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~----------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGC----------DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFK 303 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSS----------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEE
T ss_pred EEEEEEcCCCCEEEEEEEccC----------CCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEE
Confidence 45788999997 554432110 0134778887765 4 344554433222 23578899988887
Q ss_pred eCC---CCEEEEEEeeCCCCCceeeeecCCC-CCCCceeECCCCCEEEEe
Q psy4771 265 ETM---SSRVHRYYLKGPKQGKSEVFIDGLP-GLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 265 ~~~---~~~I~~~~~~g~~~~~~~~~~~~~~-g~Pdgi~~d~dG~l~va~ 310 (337)
... ..+|+++++++......+.+....+ ....++++.+++.++++.
T Consensus 304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 543 3579999986542212233333222 123456665455555544
No 266
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.98 E-value=0.12 Score=45.78 Aligned_cols=229 Identities=12% Similarity=0.042 Sum_probs=106.0
Q ss_pred EEEe-e-CCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECC--CCcEEEEECC-CcEEEEEc
Q psy4771 67 AVVK-H-KGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDK--NGALHVADAY-FGLYKVNV 139 (337)
Q Consensus 67 ~i~~-~-~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~--~G~lyVad~~-~gv~~vd~ 139 (337)
++++ . +..|.+...++.|..|+. ++...+..+. ...+....+++.+ +|+++++-+. ..|...|.
T Consensus 18 ~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~---------gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR---------GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE---------CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred EeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc---------CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 4555 3 445668888998888874 3322222221 1224467899965 3655554334 44777887
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCC--CCcc---ccc-ceeeeccccC---------CCCCCCCccEEEcCCC-
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GQTG---QTE-QLISMDTEID---------GAKPQIPNSVTVDSDG- 203 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~--g~~~---~~~-~v~~~~~~~~---------~~~~~~pn~v~vd~~G- 203 (337)
++++........ ...+ .-..++++++ |+++ ..+ .|...+.... .......+.+++++++
T Consensus 89 ~~~~~~~~~~~~-~h~~----~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 89 ENGTWEKSHEHA-GHDS----SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp SSSCCCEEEEEC-CCSS----CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred CCCcceEEEEcc-CCCC----ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 766422211100 0111 1345777776 6665 223 3332221100 0011234566776652
Q ss_pred --cEEEEcCCCCccCceeeeeecCCccEEEEcCCCC-e--e-EEEeccccceeeEEEccCC---CEEEEEeCCCCEEEEE
Q psy4771 204 --MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK-K--N-KVLIANLHFANGVELSADE---SFVIVAETMSSRVHRY 274 (337)
Q Consensus 204 --~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~-~--~-~~~~~~~~~p~gia~~~dg---~~lyva~~~~~~I~~~ 274 (337)
.+...............+....+|.|..+|..++ + . ..+...-...+.++++|++ ..++++-...++|..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 1110000000000001111233455555554332 1 1 1122233456889999986 2355566667889888
Q ss_pred EeeCCCCC--ceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 275 YLKGPKQG--KSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 275 ~~~g~~~~--~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
+++....+ ....+.. ..+....+++.++|++.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHK-FNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp ECSSTTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEEE
T ss_pred EccCccccchhhhhhhc-CCCcEEEEEEcCCCCEEEEE
Confidence 87642111 1122221 22335678888888755443
No 267
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.089 Score=51.21 Aligned_cols=172 Identities=8% Similarity=0.004 Sum_probs=92.8
Q ss_pred CCcceEEECCCCc-EEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeecccc
Q psy4771 112 GRPLGIKFDKNGA-LHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEI 186 (337)
Q Consensus 112 ~~P~Gl~~d~~G~-lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~ 186 (337)
....++++.|+|. |-++.....+...|.++ .+..+. ........ .-+.+++++||+++ .++.|...+.+-
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~---sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSR---TYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTT---CEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccc---cEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 4467999999995 55555434477777543 222222 10000010 12468999999998 233333333111
Q ss_pred C-----------------CCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeE----EEec-
Q psy4771 187 D-----------------GAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNK----VLIA- 244 (337)
Q Consensus 187 ~-----------------~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~----~~~~- 244 (337)
. ..-......+++.||| + ++... ++.+..+|.++++.. .+..
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-L-aass~--------------D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-L-VAALS--------------NNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-E-EEEET--------------TCCEEEECCCSSSSCCCEEEEECC
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc-E-EEEeC--------------CCeEEEEECCCCccccceeeeccc
Confidence 1 0012367788888887 3 33222 346777777666531 2322
Q ss_pred cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeE--CCCCCEEEEec
Q psy4771 245 NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKR--DSKGNFLVSLV 311 (337)
Q Consensus 245 ~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~--d~dG~l~va~~ 311 (337)
.-.....++++ |+.|..+. .++|..+++.+.. ...+..+....-.++++ .++|...+...
T Consensus 225 h~~~V~svaFs--g~~LASa~--~~tIkLWd~~~~~---~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 225 SRRKITDLKIV--DYKVVLTC--PGYVHKIDLKNYS---ISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CSSCCCCEEEE--TTEEEEEC--SSEEEEEETTTTE---EEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred ccCcEEEEEEE--CCEEEEEe--CCeEEEEECCCCe---EEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 22457889998 45666664 4799999976542 21222122233456777 66665444443
No 268
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.96 E-value=0.15 Score=45.96 Aligned_cols=150 Identities=11% Similarity=0.050 Sum_probs=81.5
Q ss_pred ccEEEe-e-CC-eEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCC---CcEEEE-ECCCcEEEE
Q psy4771 65 PEAVVK-H-KG-DLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKN---GALHVA-DAYFGLYKV 137 (337)
Q Consensus 65 P~~i~~-~-~g-~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~---G~lyVa-d~~~gv~~v 137 (337)
..++++ . ++ .+++...++.|..|+.........+. .......+.+.+. +.++++ .....|..+
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN----------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLC 171 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE----------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc----------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEE
Confidence 445555 3 44 45588889999999874333222221 1133556777664 335444 333448888
Q ss_pred EcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccC
Q psy4771 138 NVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKS 216 (337)
Q Consensus 138 d~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~ 216 (337)
|..+++...... + .-.....+++.++|. ++++...
T Consensus 172 d~~~~~~~~~~~------~---------------------------------~~~~v~~~~~~~~~~~ll~~~~~----- 207 (408)
T 4a11_B 172 DLKSGSCSHILQ------G---------------------------------HRQEILAVSWSPRYDYILATASA----- 207 (408)
T ss_dssp ESSSSCCCEEEC------C---------------------------------CCSCEEEEEECSSCTTEEEEEET-----
T ss_pred eCCCcceeeeec------C---------------------------------CCCcEEEEEECCCCCcEEEEEcC-----
Confidence 877654332221 0 112356778888775 4444322
Q ss_pred ceeeeeecCCccEEEEcCCCCe--eEEE---------------eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 217 GLFEGLTSGSGRLIQYNPKTKK--NKVL---------------IANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 217 ~~~~~~~~~~G~v~~~d~~~~~--~~~~---------------~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..++. ...+ ...-.....++++++++.|+++.. .+.|..+++..
T Consensus 208 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~ 276 (408)
T 4a11_B 208 ---------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSSN 276 (408)
T ss_dssp ---------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred ---------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECCC
Confidence 3455555554332 1111 112234577889998876666553 46777777753
No 269
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.89 E-value=0.16 Score=50.68 Aligned_cols=84 Identities=21% Similarity=0.338 Sum_probs=48.3
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCC-CceeeeecCCCCCCCceeECCCC
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQ-GKSEVFIDGLPGLPDNVKRDSKG 304 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~-~~~~~~~~~~~g~Pdgi~~d~dG 304 (337)
.|.|..+|+.+|++.--.......++-.++..+..+|++ +..+.|+.|+.+.++. -+.+. -.+..+.| +....+|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~~~-~~~~~~~p--~ty~~~G 529 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQPA-ASGVMAAP--VTYSVDG 529 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEEC-SSCCCSCC--EEEEETT
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccceeeeC-CCCcccCc--eEEEECC
Confidence 388999999999864333221112333555566677776 4578999999754321 11110 01111223 4445689
Q ss_pred CEEEEecCC
Q psy4771 305 NFLVSLVCP 313 (337)
Q Consensus 305 ~l~va~~~~ 313 (337)
+.||+...+
T Consensus 530 ~qyv~~~~G 538 (689)
T 1yiq_A 530 EQYVTFMAG 538 (689)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999887654
No 270
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.85 E-value=0.019 Score=57.62 Aligned_cols=122 Identities=7% Similarity=-0.025 Sum_probs=79.8
Q ss_pred cceEEECCCCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCC
Q psy4771 114 PLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQI 193 (337)
Q Consensus 114 P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~ 193 (337)
-..+.+.++|.+++++ ...|+.+|.++++...+.... ... .-...
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~---~~~-------------------------------~~~~~ 63 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENS---TFD-------------------------------EFGHS 63 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTT---TTT-------------------------------TCCSC
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEech---hhh-------------------------------hhccc
Confidence 3478999999777776 455999999988876665310 000 00112
Q ss_pred CccEEEcCCCc-EEEEcCCC-CccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEE
Q psy4771 194 PNSVTVDSDGM-VYWSDSST-KYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRV 271 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~-~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I 271 (337)
.++++++|||+ |.++.... .+ -+...|.++.+|.++++...+......-...++||||+.|.++. .+.|
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~-------r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i 134 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQW-------RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--NNDI 134 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECS-------SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--TTEE
T ss_pred ccceEECCCCCEEEEEECCeeeE-------EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--CCeE
Confidence 46789999997 55443211 10 02234688999999998765544444567889999999886664 4688
Q ss_pred EEEEeeCC
Q psy4771 272 HRYYLKGP 279 (337)
Q Consensus 272 ~~~~~~g~ 279 (337)
+..+++++
T Consensus 135 ~~~~~~~~ 142 (740)
T 4a5s_A 135 YVKIEPNL 142 (740)
T ss_dssp EEESSTTS
T ss_pred EEEECCCC
Confidence 88877653
No 271
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.18 Score=44.84 Aligned_cols=152 Identities=11% Similarity=0.050 Sum_probs=82.1
Q ss_pred cEEEe-eCC-eEEEEecCcEEEEEeCCc-------eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEE
Q psy4771 66 EAVVK-HKG-DLYMGVDGGHILKLSGGK-------LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLY 135 (337)
Q Consensus 66 ~~i~~-~~g-~ly~d~~~g~I~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~ 135 (337)
.++++ .++ .|.+...++.|..|+... ......+. .......+++++++|+.+++-... .|.
T Consensus 62 ~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~---------~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 62 RSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE---------GHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-------------CEEEEEECTTSCEEEEEETTSCEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc---------CCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 45666 444 455888899888887521 11111111 122446789999999766664444 477
Q ss_pred EEEcC-CCe-EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCC
Q psy4771 136 KVNVT-TGQ-TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTK 213 (337)
Q Consensus 136 ~vd~~-~g~-~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~ 213 (337)
..|.. ++. ...+.. ..+ .-...+.+++.++|.+.++-..
T Consensus 133 iwd~~~~~~~~~~~~~----~~~---------------------------------h~~~v~~v~~~p~~~~l~s~s~-- 173 (330)
T 2hes_X 133 IWETDESGEEYECISV----LQE---------------------------------HSQDVKHVIWHPSEALLASSSY-- 173 (330)
T ss_dssp EEECCTTCCCCEEEEE----ECC---------------------------------CSSCEEEEEECSSSSEEEEEET--
T ss_pred EEeccCCCCCeEEEEE----ecc---------------------------------CCCceEEEEECCCCCEEEEEcC--
Confidence 77763 221 111111 011 1124678899999886665543
Q ss_pred ccCceeeeeecCCccEEEEcCCCCe---eEEEeccccceeeEEEccC--CCEEEEEeCCCCEEEEEEeeC
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKK---NKVLIANLHFANGVELSAD--ESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~---~~~~~~~~~~p~gia~~~d--g~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..++. +..+...-.....++++++ +. .+++-...+.|..+++.+
T Consensus 174 ------------D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 174 ------------DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp ------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEE
T ss_pred ------------CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecC
Confidence 2345444443332 1222233345678999998 43 444555567777777753
No 272
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.78 E-value=0.017 Score=57.74 Aligned_cols=107 Identities=10% Similarity=-0.026 Sum_probs=62.5
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCC----
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMS---- 268 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~---- 268 (337)
..+++++|||+ |.++..... .....|+.+|.++++.......-....+++++|||+.||++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G----------~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASG----------SDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETT----------CSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred EEEEEECCCCCEEEEEEcCCC----------CceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccc
Confidence 46788999997 444332110 011278999998887654322112246799999999988876442
Q ss_pred -----------CEEEEEEeeCCCCCceeeeecC-CCCCCCceeECCCCC-EEEEe
Q psy4771 269 -----------SRVHRYYLKGPKQGKSEVFIDG-LPGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 269 -----------~~I~~~~~~g~~~~~~~~~~~~-~~g~Pdgi~~d~dG~-l~va~ 310 (337)
.+|+++++.++......++... .+....++++++||+ |.++.
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3588888754322112232221 122334788999997 33333
No 273
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.75 E-value=0.053 Score=50.45 Aligned_cols=149 Identities=11% Similarity=0.076 Sum_probs=84.8
Q ss_pred cEEEe--eCC-eEEEEecCcEEEEEeCC-c-eeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEc
Q psy4771 66 EAVVK--HKG-DLYMGVDGGHILKLSGG-K-LVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNV 139 (337)
Q Consensus 66 ~~i~~--~~g-~ly~d~~~g~I~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~ 139 (337)
.+|++ .++ .|++...++.|..|+.. + ...+. ... ........++++++|.++++-...+ |..+|.
T Consensus 168 ~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 168 TGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA--SSD-------TINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE--CCS-------SCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe--ccC-------CCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 45666 244 56688889988888863 2 22221 110 1112345789999997777654444 777787
Q ss_pred CCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCc-EEEEcCCCCccCce
Q psy4771 140 TTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKSGL 218 (337)
Q Consensus 140 ~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~-lyvtd~~~~~~~~~ 218 (337)
++..+..+. + --...+.+++++++. ++++...
T Consensus 239 ~~~~~~~~~-------~---------------------------------h~~~v~~v~~~p~~~~~~~s~s~------- 271 (435)
T 4e54_B 239 DGKELWNLR-------M---------------------------------HKKKVTHVALNPCCDWFLATASV------- 271 (435)
T ss_dssp SSCBCCCSB-------C---------------------------------CSSCEEEEEECTTCSSEEEEEET-------
T ss_pred CcceeEEEe-------c---------------------------------ccceEEeeeecCCCceEEEEecC-------
Confidence 654332221 1 012357888888775 4444322
Q ss_pred eeeeecCCccEEEEcCCCCeeE-EE---eccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 219 FEGLTSGSGRLIQYNPKTKKNK-VL---IANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 219 ~~~~~~~~G~v~~~d~~~~~~~-~~---~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..+.+.. .+ ...-...+.++++|||+.|+.+. ..+.|..+++..
T Consensus 272 -------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~-~D~~i~iwd~~~ 327 (435)
T 4e54_B 272 -------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD-QKSEIRVYSASQ 327 (435)
T ss_dssp -------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-SSSCEEEEESSS
T ss_pred -------cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc-CCCEEEEEECCC
Confidence 335555565443211 11 11223457889999998666554 457888888753
No 274
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.62 E-value=0.0016 Score=60.04 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=31.4
Q ss_pred EEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECC-CcEEEEEcCCCeE
Q psy4771 68 VVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAY-FGLYKVNVTTGQT 144 (337)
Q Consensus 68 i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~-~gv~~vd~~~g~~ 144 (337)
.++.++.+|+...++.|+.++..+.+...++.. +......+..+|.+|++... ..|+.+|.++|+.
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----------CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-----------CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 345788999888999999999633222211110 11111222345677777444 3488899877754
No 275
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.59 E-value=0.21 Score=46.31 Aligned_cols=53 Identities=9% Similarity=0.014 Sum_probs=34.5
Q ss_pred CccEEEEcCCCCeeEEEe------ccccceeeEEEccCCCEEEEEeCCCC---EEEEEEeeC
Q psy4771 226 SGRLIQYNPKTKKNKVLI------ANLHFANGVELSADESFVIVAETMSS---RVHRYYLKG 278 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~------~~~~~p~gia~~~dg~~lyva~~~~~---~I~~~~~~g 278 (337)
+|.|..+|..+++..... ........+++++++..+.++...+. +|..++.+.
T Consensus 381 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 381 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 568888888877653333 12345688999999865555554432 588888653
No 276
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.58 E-value=0.4 Score=43.15 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=50.9
Q ss_pred CCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCcc-EEEEcCCCCeeEEEec---cccceeeEEEccCCCEEEEEeCC
Q psy4771 192 QIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGR-LIQYNPKTKKNKVLIA---NLHFANGVELSADESFVIVAETM 267 (337)
Q Consensus 192 ~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~-v~~~d~~~~~~~~~~~---~~~~p~gia~~~dg~~lyva~~~ 267 (337)
...+.++++++|++.++-.. +|. |..+|..+++...... .....+.++++||++.|..+ ..
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~--------------d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~-s~ 260 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQ--------------DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV-SD 260 (355)
T ss_dssp SCEEEEEECTTSSEEEEEET--------------TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE-ET
T ss_pred CceEEEEECCCCCEEEEEeC--------------CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE-EC
Confidence 34678999999886655443 456 8888888776544333 34456899999999865554 45
Q ss_pred CCEEEEEEeeCC
Q psy4771 268 SSRVHRYYLKGP 279 (337)
Q Consensus 268 ~~~I~~~~~~g~ 279 (337)
.+.|..+++...
T Consensus 261 d~~v~iw~~~~~ 272 (355)
T 3vu4_A 261 KWTLHVFEIFND 272 (355)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEEccCC
Confidence 678999998643
No 277
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.52 E-value=0.074 Score=53.04 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=46.5
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEecCcccc-CccccCcc-CCcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEE
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCY-GFKYEQQC-GRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQL 147 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~-~~~~~~~~-~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l 147 (337)
+.++.+|+...+++|+.+|..+.+.+-++..... .......| ....+++++ +++||++.....|+.+|.++|+...-
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEEcCCCEEEEEECCCCCEEee
Confidence 4699999888889999999743333322211000 00000000 112356664 56899996556699999998887655
Q ss_pred ec
Q psy4771 148 IS 149 (337)
Q Consensus 148 ~~ 149 (337)
..
T Consensus 154 ~~ 155 (677)
T 1kb0_A 154 QN 155 (677)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 278
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.52 E-value=0.029 Score=50.79 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=70.7
Q ss_pred cceEEECCCCc-EEEEECC---Cc--EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 114 PLGIKFDKNGA-LHVADAY---FG--LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 114 P~Gl~~d~~G~-lyVad~~---~g--v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
+..++++++|+ |+++... .. |+.+|.++++...+.. ..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~----~~-------------------------------- 283 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV----MP-------------------------------- 283 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE----CC--------------------------------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee----CC--------------------------------
Confidence 45678888884 5555221 23 8888887776655542 00
Q ss_pred CCCCCCCccEEEcC-CCcEEEEcCCCC---ccCceeeeeecCCccEEEEcCCCCeeEEEecccc-----------ceeeE
Q psy4771 188 GAKPQIPNSVTVDS-DGMVYWSDSSTK---YKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLH-----------FANGV 252 (337)
Q Consensus 188 ~~~~~~pn~v~vd~-~G~lyvtd~~~~---~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~-----------~p~gi 252 (337)
..+ +++.+ ||+++++..... ..+. -.......+.|+.+|.++++...+..... ....+
T Consensus 284 -----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 356 (396)
T 3c5m_A 284 -----PCS-HLMSNFDGSLMVGDGCDAPVDVADA-DSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHP 356 (396)
T ss_dssp -----SEE-EEEECSSSSEEEEEECCC-----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCC
T ss_pred -----CCC-CCccCCCCceEEEecCCcceeeccc-cccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCc
Confidence 012 67888 888665432100 0000 00001234589999998887655543322 24567
Q ss_pred EEccCCCEEEEEeCC--CCEEEEEEeeCC
Q psy4771 253 ELSADESFVIVAETM--SSRVHRYYLKGP 279 (337)
Q Consensus 253 a~~~dg~~lyva~~~--~~~I~~~~~~g~ 279 (337)
++++||+.|+++... ...|+++++++.
T Consensus 357 ~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 357 SFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred eEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 899999988877653 346777776653
No 279
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.47 E-value=0.14 Score=44.71 Aligned_cols=70 Identities=10% Similarity=-0.087 Sum_probs=41.4
Q ss_pred ccEEEe-e---CCeEEEEecCcEEEEEeCCce---------eEEEecCccccCccccCccCCcceEEECCC--CcEEEEE
Q psy4771 65 PEAVVK-H---KGDLYMGVDGGHILKLSGGKL---------VPVVKLGKDCYGFKYEQQCGRPLGIKFDKN--GALHVAD 129 (337)
Q Consensus 65 P~~i~~-~---~g~ly~d~~~g~I~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~--G~lyVad 129 (337)
..++++ . +..|++...++.|..|+.... ..+..+. .......++++.++ ++++++-
T Consensus 60 v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 60 IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN---------DSKGSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC---------CCSSCEEEEEECCGGGCSEEEEE
T ss_pred EEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec---------ccCCceeEEEEcCCCCCcEEEEe
Confidence 345666 3 345568888998888875221 2222221 22345678999998 8655554
Q ss_pred CCC-cEEEEEcCCCe
Q psy4771 130 AYF-GLYKVNVTTGQ 143 (337)
Q Consensus 130 ~~~-gv~~vd~~~g~ 143 (337)
... .|..+|..+++
T Consensus 131 ~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 131 GNDGILRLYDALEPS 145 (351)
T ss_dssp ETTCEEEEEECSSTT
T ss_pred cCCCcEEEecCCChH
Confidence 344 47778876553
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.42 E-value=0.76 Score=44.66 Aligned_cols=86 Identities=17% Similarity=0.080 Sum_probs=47.5
Q ss_pred CCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCC
Q psy4771 225 GSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKG 304 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG 304 (337)
..|.|+.+|+.+|+..--........+..+...+..+|+.. ..+.|+.++.+.++.-. .+.......-.-+....+|
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~~~~~G 518 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYAT-LDGYLKALDNKDGKELW--NFKMPSGGIGSPMTYSFKG 518 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC-TTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETT
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEc-CCCeEEEEECCCCCEEE--EEeCCCCcEeeeEEEEECC
Confidence 45899999999987643332222233434443455788864 56889999975332111 1111111111223333689
Q ss_pred CEEEEecCC
Q psy4771 305 NFLVSLVCP 313 (337)
Q Consensus 305 ~l~va~~~~ 313 (337)
++||+...+
T Consensus 519 ~~yv~~~~G 527 (571)
T 2ad6_A 519 KQYIGSMYG 527 (571)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEECC
Confidence 999998766
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.42 E-value=0.35 Score=48.06 Aligned_cols=52 Identities=25% Similarity=0.367 Sum_probs=35.0
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.|.|+.+|+.+|+..--........+.++...++.+|+. +..+.|+.++.+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~t 488 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADK 488 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhc
Confidence 388999999999874333322233444555566688887 4568899998753
No 282
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.27 Score=50.68 Aligned_cols=154 Identities=8% Similarity=-0.117 Sum_probs=90.5
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcE-EEEECCCcEEEEEcCCCe
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGAL-HVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~l-yVad~~~gv~~vd~~~g~ 143 (337)
.++++ .+..|.+...++.|..|+..+...+..+. ..+....++++++|+. +++.....|..+|.++++
T Consensus 62 ~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~----------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 62 KEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF----------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp EEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE----------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc----------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 45555 43346688889999999864332232221 1134678999999954 555443448888988776
Q ss_pred EEEEeccc-----cccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCC-cEEEEcCCCCccCc
Q psy4771 144 TEQLISMD-----TEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSSTKYKSG 217 (337)
Q Consensus 144 ~~~l~~~~-----~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G-~lyvtd~~~~~~~~ 217 (337)
...+.... ....+ .....+++++++++ .+.++-.
T Consensus 132 ~~~~~i~~~~~~~~~~~~---------------------------------h~~~V~sl~~sp~~~~~l~~g~------- 171 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAA---------------------------------RLSPIVSIQWNPRDIGTVLISY------- 171 (902)
T ss_dssp EEEEEECCHHHHHTCSSS---------------------------------CCCCCCEEEEETTEEEEEEEEC-------
T ss_pred cccceecccccccccccc---------------------------------CCCCeEEEEEccCCCCEEEEEe-------
Confidence 54221100 00011 12357889999863 4333322
Q ss_pred eeeeeecCCccEEEEcCCCCeeEEEeccc-------------------cceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 218 LFEGLTSGSGRLIQYNPKTKKNKVLIANL-------------------HFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 218 ~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-------------------~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.+|.| .+|..+++........ ...+.++++|||+.|.. -...+.|..+++..
T Consensus 172 -------~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las-gs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 172 -------EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT-IHEDNSLVFWDANS 242 (902)
T ss_dssp -------SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE-EETTCCEEEEETTT
T ss_pred -------CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE-EECCCeEEEEECCC
Confidence 24567 7887776543333211 34688999999975544 44567888888753
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.22 E-value=1 Score=43.96 Aligned_cols=84 Identities=11% Similarity=0.054 Sum_probs=47.1
Q ss_pred CCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCC--CCCceeECC
Q psy4771 225 GSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPG--LPDNVKRDS 302 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g--~Pdgi~~d~ 302 (337)
..|.|+.+|+.+|+..--........+-.+...+..+|+.. ..+.++.|+.+.++. ++--.++. ...-+....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~-~dg~l~A~D~~tG~~----lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT-GDGYFKAFDAKSGKE----LWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC-TTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC-CCCcEEEEECCCCCE----EEEecCCCCcccCceEEEE
Confidence 46899999999998643222211122322333445788865 467899998753321 11111111 112255557
Q ss_pred CCCEEEEecCC
Q psy4771 303 KGNFLVSLVCP 313 (337)
Q Consensus 303 dG~l~va~~~~ 313 (337)
+|+.||+...+
T Consensus 539 ~G~qYv~~~~G 549 (582)
T 1flg_A 539 DGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999998766
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.21 E-value=1 Score=44.04 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=46.2
Q ss_pred CCccEEEEcCCCCeeEEEec-cccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCC-CceeeeecCCCCCCCceeECC
Q psy4771 225 GSGRLIQYNPKTKKNKVLIA-NLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQ-GKSEVFIDGLPGLPDNVKRDS 302 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~-~~~~~~~~~~~g~Pdgi~~d~ 302 (337)
..|.|+.+|+.+|++.--.. +...-.| .+...+..+|+.. ..+.|+.|+.+.++. -+.++ -.+..+.| +....
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g-~~~tagg~vf~gt-~dg~l~A~D~~tG~~lW~~~l-~~g~~~~P--~~y~~ 525 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGG-TMATAGDLVFYGT-LDGYLKARDSDTGDLLWKFKI-PSGAIGYP--MTYTH 525 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSB-CEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC-SSCCCSCC--EEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCc-ceEecCCEEEEEC-CCCeEEEEECCCCCEEEEeeC-CCCcEecc--EEEEe
Confidence 45899999999998643222 2111123 2233445788864 467899998754321 11111 11111223 44446
Q ss_pred CCCEEEEecCC
Q psy4771 303 KGNFLVSLVCP 313 (337)
Q Consensus 303 dG~l~va~~~~ 313 (337)
+|+.||+...+
T Consensus 526 ~G~qyv~~~~G 536 (599)
T 1w6s_A 526 KGTQYVAIYYG 536 (599)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999988766
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.19 E-value=0.32 Score=47.37 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=45.5
Q ss_pred eeCCeEEEEec-CcEEEEEeC-CceeEEEecCccccCccccCcc--CCcceEEECCCCcEEEEECCCcEEEEEcCCCeEE
Q psy4771 70 KHKGDLYMGVD-GGHILKLSG-GKLVPVVKLGKDCYGFKYEQQC--GRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTE 145 (337)
Q Consensus 70 ~~~g~ly~d~~-~g~I~~~~~-~~~~~~~~~g~~~~~~~~~~~~--~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~ 145 (337)
+.++.+|+... +++|+.+|. .+.+.+-++............| ....+++++ +|+||+......++.+|.++|++.
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-CCEEEEEeCCCEEEEEECCCCCEE
Confidence 46899997777 889999996 4443332221100000000001 012355664 568999965556999999988876
Q ss_pred EEe
Q psy4771 146 QLI 148 (337)
Q Consensus 146 ~l~ 148 (337)
.-.
T Consensus 139 W~~ 141 (571)
T 2ad6_A 139 WEV 141 (571)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 286
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.10 E-value=0.74 Score=41.34 Aligned_cols=86 Identities=12% Similarity=0.078 Sum_probs=52.5
Q ss_pred cCCccEEEEcCCCCe-----------------eEEEeccccceeeEEEccCCCEEEEEeCCCCE-EEEEEeeCCCCCcee
Q psy4771 224 SGSGRLIQYNPKTKK-----------------NKVLIANLHFANGVELSADESFVIVAETMSSR-VHRYYLKGPKQGKSE 285 (337)
Q Consensus 224 ~~~G~v~~~d~~~~~-----------------~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~-I~~~~~~g~~~~~~~ 285 (337)
..+|.|..+|..+++ ...+...-...+.++++|||+.|..+. ..+. |..+++...+ ...
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s-~d~~~v~iwd~~~~~--~~~ 232 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS-QDGTIIRVFKTEDGV--LVR 232 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE-TTCSEEEEEETTTCC--EEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe-CCCCEEEEEECCCCc--EEE
Confidence 456778888877654 344444455678999999997555554 4565 8888875321 122
Q ss_pred eeecC-CCCCCCceeECCCCCEEEEecC
Q psy4771 286 VFIDG-LPGLPDNVKRDSKGNFLVSLVC 312 (337)
Q Consensus 286 ~~~~~-~~g~Pdgi~~d~dG~l~va~~~ 312 (337)
.+..+ ..+....++++++|++.++...
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred EEEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 33312 2334567889999986665543
No 287
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.99 E-value=0.78 Score=42.28 Aligned_cols=207 Identities=11% Similarity=0.059 Sum_probs=106.0
Q ss_pred CccEEEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCe
Q psy4771 64 GPEAVVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQ 143 (337)
Q Consensus 64 ~P~~i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~ 143 (337)
.-.++.+.++.+++...++.|..|+..+...+..+. ........+.++. ..++++.....|..+|..+++
T Consensus 201 ~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---------~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 201 TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM---------GHVAAVRCVQYDG-RRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEE---------CCSSCEEEEEECS-SCEEEEETTSCEEEEEGGGTE
T ss_pred cEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEc---------CCcccEEEEEECC-CEEEEEcCCCEEEEEECCCCc
Confidence 346888888889988899999999863322222221 1123456777754 478888777877777777666
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcc----cccceeeeccccCC------CCCCCCccEEEcCCCcEEEEcCCCC
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTG----QTEQLISMDTEIDG------AKPQIPNSVTVDSDGMVYWSDSSTK 213 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~----~~~~v~~~~~~~~~------~~~~~pn~v~vd~~G~lyvtd~~~~ 213 (337)
....... ..+. -..+.+ +|+.+ .++.|...+..... ........+.+ +++..++
T Consensus 271 ~~~~~~~---~~~~----v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~----- 334 (445)
T 2ovr_B 271 CLHTLQG---HTNR----VYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVS----- 334 (445)
T ss_dssp EEEEECC---CSSC----EEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEE-----
T ss_pred EeEEecC---CCCc----eEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEE-----
Confidence 5444421 1110 111222 33333 11222222210000 00111222222 2222222
Q ss_pred ccCceeeeeecCCccEEEEcCCCCeeEEEecc----ccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeeee-
Q psy4771 214 YKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN----LHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVFI- 288 (337)
Q Consensus 214 ~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~----~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~- 288 (337)
...+|.|..+|..+++....... ......++++ ++.|+. -...+.|..+++..++. ...+.
T Consensus 335 ---------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s-~~~dg~v~iwd~~~~~~--~~~~~~ 400 (445)
T 2ovr_B 335 ---------GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVIT-SSDDGTVKLWDLKTGEF--IRNLVT 400 (445)
T ss_dssp ---------EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEE-EETTSEEEEEETTTCCE--EEEEEE
T ss_pred ---------EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEE-EeCCCeEEEEECCCCce--eeeeec
Confidence 33457888888877765433332 2334566664 554444 44568899999764321 12221
Q ss_pred ---cCCCCCCCceeECCCCCEEEEe
Q psy4771 289 ---DGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 289 ---~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
....+....++++++|.+.++.
T Consensus 401 ~~~~~~~~~v~~~~~s~~~~~la~~ 425 (445)
T 2ovr_B 401 LESGGSGGVVWRIRASNTKLVCAVG 425 (445)
T ss_dssp CTTGGGTCEEEEEEECSSEEEEEEE
T ss_pred cccCCCCceEEEEEecCCEEEEEEc
Confidence 1122345678888888654443
No 288
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.99 E-value=0.68 Score=39.96 Aligned_cols=82 Identities=9% Similarity=-0.011 Sum_probs=52.6
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC-CCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCC
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET-MSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKG 304 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~-~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG 304 (337)
.+.|..+|..................++++++++.++++.. ..+.|..+++...+ ....+. +..+....+++.++|
T Consensus 220 ~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~-gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELK-GHTSRVLSLTMSPDG 296 (318)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTS
T ss_pred CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCC
Confidence 45677777766665555555556778899999988877653 46788888875321 122222 122335678899999
Q ss_pred CEEEEe
Q psy4771 305 NFLVSL 310 (337)
Q Consensus 305 ~l~va~ 310 (337)
++.++.
T Consensus 297 ~~l~S~ 302 (318)
T 4ggc_A 297 ATVASA 302 (318)
T ss_dssp SCEEEE
T ss_pred CEEEEE
Confidence 865554
No 289
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.98 E-value=0.3 Score=48.56 Aligned_cols=78 Identities=12% Similarity=0.130 Sum_probs=46.2
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEecCccccCc-cccCccC-CcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEE
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGF-KYEQQCG-RPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQL 147 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l 147 (337)
+.++.+|+...+++|+.+|..+.+.+-++....... .....|. ...+++++ +++||+......|+.+|.++|+...-
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-CCEEEEEcCCCEEEEEECCCCCEeee
Confidence 469999988889999999973333332221100000 0000111 12456664 56899987555699999998987655
Q ss_pred e
Q psy4771 148 I 148 (337)
Q Consensus 148 ~ 148 (337)
.
T Consensus 143 ~ 143 (668)
T 1kv9_A 143 Q 143 (668)
T ss_dssp E
T ss_pred e
Confidence 4
No 290
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.94 E-value=0.23 Score=43.85 Aligned_cols=71 Identities=8% Similarity=0.079 Sum_probs=50.1
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEE--ccCCCEEEEEeCCCCE
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVEL--SADESFVIVAETMSSR 270 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~--~~dg~~lyva~~~~~~ 270 (337)
..+.+++.++|+..++-.. +|.|..+|..+++.......-.....+++ +++++.|+.+ ...+.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~--------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~ 152 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASC--------------DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTG-SWDKT 152 (368)
T ss_dssp CEEEEEECTTSSEEEEEET--------------TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEE-ETTSE
T ss_pred CEEEEEECcCCCEEEEEcC--------------CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEc-cCCCc
Confidence 3678999999875544332 45788888888877666555566788999 8888645544 45678
Q ss_pred EEEEEeeC
Q psy4771 271 VHRYYLKG 278 (337)
Q Consensus 271 I~~~~~~g 278 (337)
|..+++..
T Consensus 153 i~vwd~~~ 160 (368)
T 3mmy_A 153 LKFWDTRS 160 (368)
T ss_dssp EEEECSSC
T ss_pred EEEEECCC
Confidence 88888754
No 291
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.17 Score=46.60 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=43.2
Q ss_pred CCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEE
Q psy4771 72 KGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQ 146 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~ 146 (337)
+..+++...++.|..|+......+..+... ...+....++++++|+++++-...+ |..+|..+++...
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENS-------PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECC-------GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccC-------CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 345558888999999987433333222110 0234578999999997666544445 8888987765443
No 292
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.85 E-value=0.052 Score=54.03 Aligned_cols=100 Identities=10% Similarity=-0.006 Sum_probs=58.6
Q ss_pred CccEEEcCCCc-EEEE-cCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce--eeEEEccCCCEEEEEeCC--
Q psy4771 194 PNSVTVDSDGM-VYWS-DSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA--NGVELSADESFVIVAETM-- 267 (337)
Q Consensus 194 pn~v~vd~~G~-lyvt-d~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p--~gia~~~dg~~lyva~~~-- 267 (337)
..+++++|||+ |.++ +.+. .....|+.+|.++++... ...+... .+++++|||+.|+.+...
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G-----------~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~ 190 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNA-----------ADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTD 190 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETT-----------CSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEECCCC-----------CceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCC
Confidence 56788999997 4333 3221 112478999998887530 1122222 689999999988877653
Q ss_pred ----------CCEEEEEEeeCCCCCceeeeecC-CCCCCCceeECCCCC
Q psy4771 268 ----------SSRVHRYYLKGPKQGKSEVFIDG-LPGLPDNVKRDSKGN 305 (337)
Q Consensus 268 ----------~~~I~~~~~~g~~~~~~~~~~~~-~~g~Pdgi~~d~dG~ 305 (337)
..+|+++++.++......++... .+..-.++++++||+
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 239 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK 239 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC
Confidence 24588888754322122332221 112234678888886
No 293
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.82 E-value=0.39 Score=47.64 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=55.8
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeC---CCC
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAET---MSS 269 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~---~~~ 269 (337)
..++++++||+ |.++..... ....|+.++..+++.+.+............ ++|+ +|+... ...
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~-----------~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~ 295 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGW-----------SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQ 295 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETT-----------TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTC
T ss_pred EEEEEECCCCCEEEEEEeCCC-----------CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCC
Confidence 45788999986 554432210 123677777766666666654443344444 6777 766543 357
Q ss_pred EEEEEEeeCCCCCceeeeecCCC-CCCCceeECCCCCEEEEe
Q psy4771 270 RVHRYYLKGPKQGKSEVFIDGLP-GLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 270 ~I~~~~~~g~~~~~~~~~~~~~~-g~Pdgi~~d~dG~l~va~ 310 (337)
+|+++++++....+.+.+....+ ....++++. ++.++++.
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~ 336 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEY 336 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEE
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEE
Confidence 89999886542211233332221 123455665 45555544
No 294
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.82 E-value=0.31 Score=45.57 Aligned_cols=113 Identities=17% Similarity=0.106 Sum_probs=65.3
Q ss_pred CCcceEEECCC-CcEEEEECCC-cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 112 GRPLGIKFDKN-GALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 112 ~~P~Gl~~d~~-G~lyVad~~~-gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
....+++++++ ++++++-... .|..+|..++....... +
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~------~--------------------------------- 190 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL------P--------------------------------- 190 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE------C---------------------------------
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc------C---------------------------------
Confidence 45789999998 6766654444 48888887663321111 0
Q ss_pred CCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc-------cceeeEEEccCCCEEE
Q psy4771 190 KPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL-------HFANGVELSADESFVI 262 (337)
Q Consensus 190 ~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-------~~p~gia~~~dg~~ly 262 (337)
.-...++++++++|+..++-. .+|.|..+|.+......+.... .....+++++++.++.
T Consensus 191 ~~~~v~~v~wspdg~~lasgs--------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGK--------------QNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEE--------------TTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred CCCceeEEEEcCCCCEEEEEc--------------CCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 012368899999987443332 2457888887732222222111 1456788888875554
Q ss_pred EEeCCC------CEEEEEEee
Q psy4771 263 VAETMS------SRVHRYYLK 277 (337)
Q Consensus 263 va~~~~------~~I~~~~~~ 277 (337)
+...+. ..+..+++.
T Consensus 257 ~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 257 VYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp EEEETTCCSSSCCEEEEEECC
T ss_pred EEccCCCccCCCCceEEEEec
Confidence 444332 246677765
No 295
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.71 E-value=0.91 Score=41.48 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=42.6
Q ss_pred ccEEEee---CCeEEEEecCc----EEEEEeC-C-ceeEEEecCccccCccccC----ccCCcceEEECC---CCcEEEE
Q psy4771 65 PEAVVKH---KGDLYMGVDGG----HILKLSG-G-KLVPVVKLGKDCYGFKYEQ----QCGRPLGIKFDK---NGALHVA 128 (337)
Q Consensus 65 P~~i~~~---~g~ly~d~~~g----~I~~~~~-~-~~~~~~~~g~~~~~~~~~~----~~~~P~Gl~~d~---~G~lyVa 128 (337)
-.+|+++ .+.+|+....| .|++.+. + .++.+. ....... .... ...+-.+|++++ .++||++
T Consensus 57 v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~-~~~~~~~-~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 57 IHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEAT-RPPAFNK-APEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECS-BCCCCCC-CC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred eEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECC-ccccCCC-cccccccccccceeEEEeCCCCCCCEEEEE
Confidence 3566663 68899776666 7888765 3 233221 0000000 0000 112344688985 5799998
Q ss_pred ECCCcEEEEEcCCCeEEEE
Q psy4771 129 DAYFGLYKVNVTTGQTEQL 147 (337)
Q Consensus 129 d~~~gv~~vd~~~g~~~~l 147 (337)
....+|++-+-.+...+.+
T Consensus 135 ~~~ggl~~S~DgG~tW~~~ 153 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPV 153 (394)
T ss_dssp EETTEEEEESSTTSBCEEC
T ss_pred ecCCcEEEEcCCCCCeEEC
Confidence 6556788776544444443
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.68 E-value=0.74 Score=45.12 Aligned_cols=79 Identities=13% Similarity=0.080 Sum_probs=46.3
Q ss_pred eeCCeEEEEec-CcEEEEEeC-CceeEEEecCccccC-ccccCcc-CCcceEEECC-CCc----EEEEECCCcEEEEEcC
Q psy4771 70 KHKGDLYMGVD-GGHILKLSG-GKLVPVVKLGKDCYG-FKYEQQC-GRPLGIKFDK-NGA----LHVADAYFGLYKVNVT 140 (337)
Q Consensus 70 ~~~g~ly~d~~-~g~I~~~~~-~~~~~~~~~g~~~~~-~~~~~~~-~~P~Gl~~d~-~G~----lyVad~~~gv~~vd~~ 140 (337)
+.++.+|+... +++|+.+|. .+.+.+-++...... ......| ....|+++.+ +|. ||+......|+.+|.+
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 60 VVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 46899997777 788999987 444433222111000 0000001 1134677742 446 9998755569999999
Q ss_pred CCeEEEEe
Q psy4771 141 TGQTEQLI 148 (337)
Q Consensus 141 ~g~~~~l~ 148 (337)
+|++..-.
T Consensus 140 TG~~~W~~ 147 (599)
T 1w6s_A 140 TGETVWKV 147 (599)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEee
Confidence 99876554
No 297
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.66 E-value=0.55 Score=46.82 Aligned_cols=78 Identities=17% Similarity=0.068 Sum_probs=46.0
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEecCccccC-ccccCccC-CcceEEECCCCcEEEEECCCcEEEEEcCCCeEEEE
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYG-FKYEQQCG-RPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQL 147 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~-~~~~~~~~-~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~l 147 (337)
+.++.+|+...+++|+.+|..+.+.+-++...... ......|. ...+++++ +|+||+......|+.+|.++|+...-
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEccCCEEEEEECCCCCEeee
Confidence 46999998888899999997433333222110000 00000011 12355664 56899997555699999999987655
Q ss_pred e
Q psy4771 148 I 148 (337)
Q Consensus 148 ~ 148 (337)
.
T Consensus 147 ~ 147 (689)
T 1yiq_A 147 V 147 (689)
T ss_dssp E
T ss_pred e
Confidence 4
No 298
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.58 E-value=0.67 Score=42.40 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=39.5
Q ss_pred CCeEEEEecCcEEEEEeCC--ceeEEEecCc-cccCccc------cCccCCcceEEECC--CCcEEEEECCCcEEEEEcC
Q psy4771 72 KGDLYMGVDGGHILKLSGG--KLVPVVKLGK-DCYGFKY------EQQCGRPLGIKFDK--NGALHVADAYFGLYKVNVT 140 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~-~~~~~~~------~~~~~~P~Gl~~d~--~G~lyVad~~~gv~~vd~~ 140 (337)
.+.+|+....+.|+|.+.+ .++.+..... .....+. ......-..|++|+ .++||++....+|++-+-.
T Consensus 128 ~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg 207 (394)
T 3b7f_A 128 PGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA 207 (394)
T ss_dssp TTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST
T ss_pred CCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC
Confidence 6789977777779998653 3333211100 0000000 00112235799987 3589999654567776544
Q ss_pred CCeEEEE
Q psy4771 141 TGQTEQL 147 (337)
Q Consensus 141 ~g~~~~l 147 (337)
+...+.+
T Consensus 208 G~tW~~~ 214 (394)
T 3b7f_A 208 GTDWKPL 214 (394)
T ss_dssp TSSCEEC
T ss_pred CCCceEC
Confidence 4344433
No 299
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.33 Score=47.22 Aligned_cols=148 Identities=10% Similarity=0.044 Sum_probs=88.1
Q ss_pred ccEEEe--eCCeEEEEecCcEEEEEeCCcee-------EEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEE
Q psy4771 65 PEAVVK--HKGDLYMGVDGGHILKLSGGKLV-------PVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLY 135 (337)
Q Consensus 65 P~~i~~--~~g~ly~d~~~g~I~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~ 135 (337)
-.++++ ++..|+++..+|+|.-|+..+.. .+..+.... .........+++.|+| +..+...+.+.
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~-----~gh~~~V~sVawSPdg-Laass~D~tVr 205 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD-----AGSKDWVTHIVWYEDV-LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC-----TTCCCCEEEEEEETTE-EEEEETTCCEE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc-----ccccccEEEEEEcCCc-EEEEeCCCeEE
Confidence 346777 45677799999999888862211 122221000 0112457799999999 66665556688
Q ss_pred EEEcCCCeEE----EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCC
Q psy4771 136 KVNVTTGQTE----QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 211 (337)
Q Consensus 136 ~vd~~~g~~~----~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~ 211 (337)
..|.++++.. .+.. + .-....++++. |...++..
T Consensus 206 lWd~~~~~~~~~~~tL~~------~---------------------------------h~~~V~svaFs--g~~LASa~- 243 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQN------A---------------------------------SRRKITDLKIV--DYKVVLTC- 243 (588)
T ss_dssp EECCCSSSSCCCEEEEEC------C---------------------------------CSSCCCCEEEE--TTEEEEEC-
T ss_pred EEECCCCccccceeeecc------c---------------------------------ccCcEEEEEEE--CCEEEEEe-
Confidence 8888766532 1211 1 01246778876 34332222
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEe-ccccceeeEEE--ccCCCEEEEEeCCCCEEEEE
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI-ANLHFANGVEL--SADESFVIVAETMSSRVHRY 274 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~-~~~~~p~gia~--~~dg~~lyva~~~~~~I~~~ 274 (337)
.|.|..+|..+++..... .....-++|++ ++|+..|.++...+-+|+.+
T Consensus 244 --------------~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 244 --------------PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp --------------SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred --------------CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 258888888888774444 44556688999 99997666666332245553
No 300
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.55 E-value=0.77 Score=39.90 Aligned_cols=114 Identities=13% Similarity=0.082 Sum_probs=64.8
Q ss_pred CcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCC
Q psy4771 113 RPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKP 191 (337)
Q Consensus 113 ~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~ 191 (337)
.-..++|+++|+.+++-...+ |...|.+++..+.+.. ..| --
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~----l~g---------------------------------H~ 53 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDT----LTG---------------------------------HE 53 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEE----ECC---------------------------------CS
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEE----Ecc---------------------------------cc
Confidence 456899999997766654444 6666765331111110 111 01
Q ss_pred CCCccEEEcC--CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccC--CCEEEEE
Q psy4771 192 QIPNSVTVDS--DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSAD--ESFVIVA 264 (337)
Q Consensus 192 ~~pn~v~vd~--~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~d--g~~lyva 264 (337)
...+++++.+ +|++.++-.. +|.|..+|..+++. ..+...-...+.++++|+ ++.|..
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~--------------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s- 118 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSY--------------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV- 118 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEET--------------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-
T ss_pred CCeEEEEecCCCcCCEEEEEcC--------------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-
Confidence 2346777764 3665544432 45666677665532 222223345688999987 665544
Q ss_pred eCCCCEEEEEEeeC
Q psy4771 265 ETMSSRVHRYYLKG 278 (337)
Q Consensus 265 ~~~~~~I~~~~~~g 278 (337)
-...+.|..+++..
T Consensus 119 ~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 119 ASSDGKVSVVEFKE 132 (297)
T ss_dssp EETTSEEEEEEBCS
T ss_pred EECCCcEEEEEecC
Confidence 44567888888864
No 301
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.52 E-value=0.22 Score=50.02 Aligned_cols=116 Identities=14% Similarity=0.089 Sum_probs=69.1
Q ss_pred CCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
+....++++++|+++++-...| |...|..++....... ..+ .
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~----l~~---------------------------------h 52 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT----LTG---------------------------------H 52 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEE----ECC---------------------------------C
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCcccee----ccC---------------------------------C
Confidence 4467889999985544433444 6666665443333221 111 1
Q ss_pred CCCCccEEEcCC--CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccC--CCEEEE
Q psy4771 191 PQIPNSVTVDSD--GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSAD--ESFVIV 263 (337)
Q Consensus 191 ~~~pn~v~vd~~--G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~d--g~~lyv 263 (337)
-....++++.++ |+..++-.. +|.|..+|..+++. ............++++|+ ++.+++
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~--------------Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSY--------------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEET--------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred cCceEEEEecCCCCCCEEEEEeC--------------CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE
Confidence 123577888776 765544432 45677777666642 222233456789999998 775555
Q ss_pred EeCCCCEEEEEEeeCC
Q psy4771 264 AETMSSRVHRYYLKGP 279 (337)
Q Consensus 264 a~~~~~~I~~~~~~g~ 279 (337)
+. ..+.|..+++...
T Consensus 119 gs-~dg~I~vwdl~~~ 133 (753)
T 3jro_A 119 AS-SDGKVSVVEFKEN 133 (753)
T ss_dssp EE-TTSEEEEEECCSS
T ss_pred Ee-CCCcEEEEEeecC
Confidence 54 5689999998654
No 302
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.42 E-value=0.12 Score=49.92 Aligned_cols=151 Identities=12% Similarity=0.055 Sum_probs=88.9
Q ss_pred cEEEe-eCCeEEEEecCcEEEEEeCCce-eEEEecCccccCccccCccCCcceE--EECCCC-cEEEEECCCc-EEEEEc
Q psy4771 66 EAVVK-HKGDLYMGVDGGHILKLSGGKL-VPVVKLGKDCYGFKYEQQCGRPLGI--KFDKNG-ALHVADAYFG-LYKVNV 139 (337)
Q Consensus 66 ~~i~~-~~g~ly~d~~~g~I~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~P~Gl--~~d~~G-~lyVad~~~g-v~~vd~ 139 (337)
.++++ .++.|.++..+|.|..|+..+. .....+. .......++ ++.++| +++++-+..+ |...|.
T Consensus 270 ~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~---------~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~ 340 (524)
T 2j04_B 270 TTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQ---------VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP 340 (524)
T ss_dssp EEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEE---------CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECG
T ss_pred EEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEee---------cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC
Confidence 45666 4567779999999999986321 1111110 111335677 567777 7777755555 777777
Q ss_pred CCCeEE-EEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCce
Q psy4771 140 TTGQTE-QLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGL 218 (337)
Q Consensus 140 ~~g~~~-~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~ 218 (337)
.+++.. .+.. .. .......+++.|+|..+++...
T Consensus 341 ~~~~~~~~~~~---~~-----------------------------------~~~~v~~v~fsp~~~~l~s~~~------- 375 (524)
T 2j04_B 341 KDIATTKTTVS---RF-----------------------------------RGSNLVPVVYCPQIYSYIYSDG------- 375 (524)
T ss_dssp GGHHHHCEEEE---EC-----------------------------------SCCSCCCEEEETTTTEEEEECS-------
T ss_pred CCCCccccccc---cc-----------------------------------ccCcccceEeCCCcCeEEEeCC-------
Confidence 544321 1111 00 1112467899999887665543
Q ss_pred eeeeecCCccEEEEcCCCCee-EEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 219 FEGLTSGSGRLIQYNPKTKKN-KVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 219 ~~~~~~~~G~v~~~d~~~~~~-~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
++.|..+|..++.. ..+.......+.|+++|+|+.| ++-...++|..+++..
T Consensus 376 -------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l-~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 376 -------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV-LAGSADGSLIITNAAR 428 (524)
T ss_dssp -------SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC-EEEETTTEEECCBSCS
T ss_pred -------CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeE-EEEECCCEEEEEechH
Confidence 23566667665543 3344445567899999999754 4555567777776543
No 303
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.29 E-value=1.6 Score=42.18 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=59.8
Q ss_pred cEEEEcCCC----C-eeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC------CCC-Cce-eeeecCCCC-
Q psy4771 228 RLIQYNPKT----K-KNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG------PKQ-GKS-EVFIDGLPG- 293 (337)
Q Consensus 228 ~v~~~d~~~----~-~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g------~~~-~~~-~~~~~~~~g- 293 (337)
.+-++|... + .......--..|+|+-++|||++++++.....++.+|+.+. .++ .-. .+.++-..|
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466777654 1 23344455678999999999999999999999999999862 111 111 112221112
Q ss_pred CCCceeECCCCCEEEEecCC
Q psy4771 294 LPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 294 ~Pdgi~~d~dG~l~va~~~~ 313 (337)
.|-=.++|.+|+.|.+++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp CEEEEEECSSSEEEEEETTT
T ss_pred cccEEEECCCCceEeeeeec
Confidence 37788999999999999755
No 304
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.15 E-value=1.9 Score=39.43 Aligned_cols=145 Identities=12% Similarity=0.100 Sum_probs=79.3
Q ss_pred EEe-eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCe
Q psy4771 68 VVK-HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQ 143 (337)
Q Consensus 68 i~~-~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~ 143 (337)
|.+ .++.|-++. ++.|+.|+. ++........ .......++++.++|+++++-...+ |...|.++++
T Consensus 111 l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~---------~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 111 VDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp EEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEec---------CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 344 344444665 788999986 3433332221 1223467999999996665544444 8888888776
Q ss_pred EEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeee
Q psy4771 144 TEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLT 223 (337)
Q Consensus 144 ~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~ 223 (337)
...... +. -.....+ ..++.+.++..
T Consensus 181 ~~~~~~------~h---------------------------------~~~v~~~--s~~~~~l~sgs------------- 206 (420)
T 4gga_A 181 RLRNMT------SH---------------------------------SARVGSL--SWNSYILSSGS------------- 206 (420)
T ss_dssp EEEEEC------CC---------------------------------SSCEEEE--EEETTEEEEEE-------------
T ss_pred EEEEEe------CC---------------------------------CCceEEE--eeCCCEEEEEe-------------
Confidence 544332 10 0112222 33344443332
Q ss_pred cCCccEEEEcCCCC--eeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 224 SGSGRLIQYNPKTK--KNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 224 ~~~G~v~~~d~~~~--~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.++.+..+|.... .+..+........++.++++++.+.... ..+.|..++...
T Consensus 207 -~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~-~D~~v~i~~~~~ 261 (420)
T 4gga_A 207 -RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-NDNLVNVWPSAP 261 (420)
T ss_dssp -TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESSC
T ss_pred -CCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee-ccccceEEeecc
Confidence 2335555554432 2233344455678899999997655544 456777777653
No 305
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.15 E-value=0.54 Score=43.10 Aligned_cols=160 Identities=11% Similarity=0.128 Sum_probs=85.0
Q ss_pred ccEEEe-eC-CeEEEEecCcEEEEEeC-----CceeEEEecCccccCccc-cC--ccCCcceEE--ECCCCcEEEEECCC
Q psy4771 65 PEAVVK-HK-GDLYMGVDGGHILKLSG-----GKLVPVVKLGKDCYGFKY-EQ--QCGRPLGIK--FDKNGALHVADAYF 132 (337)
Q Consensus 65 P~~i~~-~~-g~ly~d~~~g~I~~~~~-----~~~~~~~~~g~~~~~~~~-~~--~~~~P~Gl~--~d~~G~lyVad~~~ 132 (337)
..++++ .+ ..+++...++.|..|+. ++....... . +-.... .+ .......+. +.+++.++++-...
T Consensus 114 v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 114 VTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC-E-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE-E-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc-c-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence 345566 33 45668888888877753 221111000 0 000000 00 223344455 55777555554444
Q ss_pred -cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCC
Q psy4771 133 -GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 211 (337)
Q Consensus 133 -gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~ 211 (337)
.|..+|..+++....... .. .....+.++++++|...++-..
T Consensus 192 ~~i~iwd~~~~~~~~~~~~--~~-----------------------------------h~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIEN--SP-----------------------------------RHGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp SEEEEEETTTCCEEEEEEC--CG-----------------------------------GGCCEEEEEECTTSCEEEEEET
T ss_pred CeEEEEeCCCCeeeEEEcc--CC-----------------------------------CCCceEEEEECCCCCEEEEEcC
Confidence 488889877664433320 00 0124688999999875554432
Q ss_pred CCccCceeeeeecCCccEEEEcCCCCeeEEEe--ccccceeeEEEc----cCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 212 TKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLI--ANLHFANGVELS----ADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 212 ~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~--~~~~~p~gia~~----~dg~~lyva~~~~~~I~~~~~~g 278 (337)
+|.|..+|..+++..... .+-.....++++ +|+ .++++-...+.|..+++..
T Consensus 235 --------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 235 --------------RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp --------------TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTT
T ss_pred --------------CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCC
Confidence 457888888777653332 223344677554 455 3555566667888888753
No 306
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.02 E-value=1.3 Score=43.91 Aligned_cols=67 Identities=16% Similarity=0.358 Sum_probs=41.3
Q ss_pred EcCCC-cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccCCCEEEEEeCCC--CEEE
Q psy4771 199 VDSDG-MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSADESFVIVAETMS--SRVH 272 (337)
Q Consensus 199 vd~~G-~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyva~~~~--~~I~ 272 (337)
++++| .+||..... ...++|+++|.++++. +.+...-... +.+++++++|+++.... .+|+
T Consensus 287 ~~~~g~~l~~~t~~~-----------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRD-----------APNRRLVTVDAANPGPAHWRDLIPERQQV--LTVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp EEEETTEEEEEECTT-----------CTTCEEEEEETTSCCGGGCEEEECCCSSC--EEEEEETTEEEEEEEETTEEEEE
T ss_pred EeccCCEEEEEECCC-----------CCCCEEEEEeCCCCCccccEEEecCCCCE--EEEEEECCEEEEEEEECCeeEEE
Confidence 44544 577765431 1346899999887654 4444332222 27888888888876544 3677
Q ss_pred EEEeeC
Q psy4771 273 RYYLKG 278 (337)
Q Consensus 273 ~~~~~g 278 (337)
+++++|
T Consensus 354 ~~d~~g 359 (693)
T 3iuj_A 354 QFDYEG 359 (693)
T ss_dssp EECTTS
T ss_pred EEECCC
Confidence 877764
No 307
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.00 E-value=0.61 Score=41.03 Aligned_cols=115 Identities=11% Similarity=0.031 Sum_probs=67.6
Q ss_pred CCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
+....++++++|+++++-+..+ |...|..++....+.. ..|-
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~----l~gH--------------------------------- 56 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIAD----LRGH--------------------------------- 56 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEE----EECC---------------------------------
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEE----EcCC---------------------------------
Confidence 3456899999997766654444 6667776554322221 1110
Q ss_pred CCCCccEEEcC--CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCee---EEEeccccceeeEEEccC--CCEEEE
Q psy4771 191 PQIPNSVTVDS--DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN---KVLIANLHFANGVELSAD--ESFVIV 263 (337)
Q Consensus 191 ~~~pn~v~vd~--~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~---~~~~~~~~~p~gia~~~d--g~~lyv 263 (337)
-...+++++.+ +|++.++-. .+|.|..+|..+++. ..+...-...+.++++|+ +. +++
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s--------------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~la 121 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCS--------------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILA 121 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEE--------------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEE
T ss_pred CccEEEEEeCCCCCCCEEEEEE--------------CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCc-EEE
Confidence 12356777764 365444433 245777777776532 222223345689999998 54 555
Q ss_pred EeCCCCEEEEEEeeC
Q psy4771 264 AETMSSRVHRYYLKG 278 (337)
Q Consensus 264 a~~~~~~I~~~~~~g 278 (337)
+-...+.|..+++..
T Consensus 122 sgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 122 CGSSDGAISLLTYTG 136 (316)
T ss_dssp EECSSSCEEEEEECS
T ss_pred EEcCCCCEEEEecCC
Confidence 556667888888754
No 308
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.93 E-value=0.29 Score=49.06 Aligned_cols=101 Identities=15% Similarity=0.097 Sum_probs=56.4
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCC----
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMS---- 268 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~---- 268 (337)
..+++++|||+ |.++..... .....|+.+|.++|+.......-....+++++|| +.|+++....
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G----------~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGG----------SDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETT----------CSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred EEeEEECCCCCEEEEEEcCCC----------CceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 46788999997 433322110 0113689999988876432111111257899999 8888876433
Q ss_pred ---------CEEEEEEeeCCCCCceeeeecC-CCCCCCceeECCCCC
Q psy4771 269 ---------SRVHRYYLKGPKQGKSEVFIDG-LPGLPDNVKRDSKGN 305 (337)
Q Consensus 269 ---------~~I~~~~~~g~~~~~~~~~~~~-~~g~Pdgi~~d~dG~ 305 (337)
.+|+++++.+.......++... .+..-.++.+++||+
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC
Confidence 3588877643321122232221 111234678889987
No 309
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.87 E-value=1.6 Score=43.50 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=56.6
Q ss_pred CccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCC--e-eEEEeccccceeeEEEccCCCEEEEEeCC--
Q psy4771 194 PNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK--K-NKVLIANLHFANGVELSADESFVIVAETM-- 267 (337)
Q Consensus 194 pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~--~-~~~~~~~~~~p~gia~~~dg~~lyva~~~-- 267 (337)
..++.+++||+ |+++..... +....|+.+|.+++ + .+.+......-... +++||+.||+....
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~----------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~ 338 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGT----------DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA 338 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTT----------CSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC
T ss_pred EEEEEECCCCCEEEEEEEccC----------CCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC
Confidence 45788899996 554432210 01336788887766 4 55555443322333 45888888876542
Q ss_pred -CCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEe
Q psy4771 268 -SSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 310 (337)
Q Consensus 268 -~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~ 310 (337)
..+|+++++++.. ...+.++........+++++ ++.++++.
T Consensus 339 ~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~ 380 (741)
T 1yr2_A 339 PLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASY 380 (741)
T ss_dssp TTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEE
T ss_pred CCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEE
Confidence 4679999986532 23333333222223345555 34444443
No 310
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.47 E-value=2.9 Score=40.61 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=44.1
Q ss_pred eeCCeEEEEecCcEEEEEeCCceeEEEec--CccccCccccCccC-CcceEEECCCCcEEEEECCCcEEEEEcCCCeEEE
Q psy4771 70 KHKGDLYMGVDGGHILKLSGGKLVPVVKL--GKDCYGFKYEQQCG-RPLGIKFDKNGALHVADAYFGLYKVNVTTGQTEQ 146 (337)
Q Consensus 70 ~~~g~ly~d~~~g~I~~~~~~~~~~~~~~--g~~~~~~~~~~~~~-~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~~ 146 (337)
+.++.+|+....++|+.+|..+.+.+-++ ..... ....|. ...+++++ +++||+......|+.+|.++|+...
T Consensus 66 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~---~~~~~~~~~~g~a~~-~~~v~~~t~dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 66 VSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDD---IRPCCDVVNRGAAIY-GDKVFFGTLDASVVALNKNTGKVVW 141 (582)
T ss_dssp EETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTT---CCCSSCSCCCCCEEE-TTEEEEEETTTEEEEEESSSCCEEE
T ss_pred EECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcc---cccccccCCCccEEE-CCEEEEEeCCCEEEEEECCCCCEEe
Confidence 46899997776555999987332222221 11000 000111 12455663 5689998765669999999998765
Q ss_pred Ee
Q psy4771 147 LI 148 (337)
Q Consensus 147 l~ 148 (337)
-.
T Consensus 142 ~~ 143 (582)
T 1flg_A 142 KK 143 (582)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.46 E-value=2.5 Score=37.55 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=32.1
Q ss_pred EEEe-eCCeEEEEecCcEEEEEeC-C-ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEE
Q psy4771 67 AVVK-HKGDLYMGVDGGHILKLSG-G-KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVN 138 (337)
Q Consensus 67 ~i~~-~~g~ly~d~~~g~I~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd 138 (337)
.|+. .++.+|+....+.|+|-.. | .++.+. . .......+++++++|++|++....++++-+
T Consensus 126 ~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~-~----------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~ 189 (327)
T 2xbg_A 126 LIKALGNGSAEMITNVGAIYRTKDSGKNWQALV-Q----------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTW 189 (327)
T ss_dssp EEEEEETTEEEEEETTCCEEEESSTTSSEEEEE-C----------SCCCCEEEEEECTTSCEEEEETTSSEEEEE
T ss_pred EEEEECCCCEEEEeCCccEEEEcCCCCCCEEee-c----------CCCcceEEEEEcCCCcEEEEECCCcEEEEe
Confidence 4444 4566664445566666543 2 233321 0 111234678888888877765434455543
No 312
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.23 E-value=0.72 Score=44.30 Aligned_cols=140 Identities=8% Similarity=-0.056 Sum_probs=76.4
Q ss_pred CCcceEEECCCCcEEEEECCCcEEEEEcCCCeE--EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCC
Q psy4771 112 GRPLGIKFDKNGALHVADAYFGLYKVNVTTGQT--EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGA 189 (337)
Q Consensus 112 ~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~--~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~ 189 (337)
....++++.+++.|+.+.....|...|.+++.. ..+..
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~---------------------------------------- 306 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQV---------------------------------------- 306 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEEC----------------------------------------
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeec----------------------------------------
Confidence 446689998776665555334477888765421 11110
Q ss_pred CCCCCccE--EEcCCC-cEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeE-EEecccc--ceeeEEEccCCCEEEE
Q psy4771 190 KPQIPNSV--TVDSDG-MVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNK-VLIANLH--FANGVELSADESFVIV 263 (337)
Q Consensus 190 ~~~~pn~v--~vd~~G-~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~-~~~~~~~--~p~gia~~~dg~~lyv 263 (337)
--...++| ++.++| .+.+|-+. +|.|..+|..+++.. .+..... ....++++|+++. ++
T Consensus 307 H~~~V~sv~~~~s~~g~~~laS~S~--------------D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~ 371 (524)
T 2j04_B 307 HDSYILSVSTAYSDFEDTVVSTVAV--------------DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YI 371 (524)
T ss_dssp SSSCEEEEEEECCTTSCCEEEEEET--------------TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EE
T ss_pred ccccEEEEEEEcCCCCCeEEEEecc--------------CCeEEEEECCCCCcccccccccccCcccceEeCCCcCe-EE
Confidence 01224566 345666 66555443 456777776554321 1211111 2467999999975 55
Q ss_pred EeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEE
Q psy4771 264 AETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVS 309 (337)
Q Consensus 264 a~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va 309 (337)
+....+.|..+++..... ...+.. ..+....+++.++|.+.++
T Consensus 372 s~~~d~tv~lwd~~~~~~--~~~l~g-H~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFA--VHPLVS-RETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp EECSSSEEEEEETTCTTC--CEEEEE-CSSCEEEEECCSSCCBCEE
T ss_pred EeCCCCcEEEEECccccc--ceeeec-CCCceEEEEeCCCCCeEEE
Confidence 555667888887653221 122222 2233567777777764444
No 313
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.11 E-value=0.14 Score=47.89 Aligned_cols=70 Identities=9% Similarity=0.026 Sum_probs=47.6
Q ss_pred CCccEEEcCC-CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE-eccccceeeEEEccCCCEEEEEeCCCCE
Q psy4771 193 IPNSVTVDSD-GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL-IANLHFANGVELSADESFVIVAETMSSR 270 (337)
Q Consensus 193 ~pn~v~vd~~-G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~-~~~~~~p~gia~~~dg~~lyva~~~~~~ 270 (337)
..+++++.++ ++++++-.. +|.|..+|..+++.... ...-.....++++|||+.|+++. ..+.
T Consensus 151 ~V~~v~~~p~~~~~las~s~--------------Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~ 215 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLA--------------DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGT 215 (434)
T ss_dssp SEEEEEECSSCTTEEEEEET--------------TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSC
T ss_pred ceEEEEECCCCCCEEEEEEC--------------CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCc
Confidence 4678899987 666654432 45777788776643222 22234678999999998777776 4567
Q ss_pred EEEEEee
Q psy4771 271 VHRYYLK 277 (337)
Q Consensus 271 I~~~~~~ 277 (337)
|..++.+
T Consensus 216 v~iwd~~ 222 (434)
T 2oit_A 216 VVQYLPT 222 (434)
T ss_dssp EEEECTT
T ss_pred EEEEccC
Confidence 8888765
No 314
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.72 E-value=1.8 Score=39.80 Aligned_cols=69 Identities=7% Similarity=-0.062 Sum_probs=39.5
Q ss_pred EEEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcCCCeEE
Q psy4771 67 AVVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVTTGQTE 145 (337)
Q Consensus 67 ~i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~~g~~~ 145 (337)
++.+++..+++...++.|..|+..+...+..+. ........+.++. ..++.+.....|..+|..+++..
T Consensus 261 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 261 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN---------GHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE---------CCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEc---------CCCCcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEE
Confidence 444466677788888988888864333332221 1113345677742 24444443345888888766543
No 315
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.59 E-value=0.57 Score=47.12 Aligned_cols=101 Identities=8% Similarity=0.019 Sum_probs=57.1
Q ss_pred CCccEEEc-CCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCC-eeEEEecccc-ceeeEEEccCCCEEEEEeCCC
Q psy4771 193 IPNSVTVD-SDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTK-KNKVLIANLH-FANGVELSADESFVIVAETMS 268 (337)
Q Consensus 193 ~pn~v~vd-~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~-~~~~~~~~~~-~p~gia~~~dg~~lyva~~~~ 268 (337)
...+.+++ |||+ |.++..... .....|+.+|.+++ +. +.+.+. ...+++++|||+.|+++....
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G----------~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSG----------NEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSS----------SSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCC----------CceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECC
Confidence 34678899 9997 444432211 01125899998888 52 111111 135789999998887765431
Q ss_pred ----CEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCC
Q psy4771 269 ----SRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN 305 (337)
Q Consensus 269 ----~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~ 305 (337)
.+|+++++.++......++.+....+-.++.+++||+
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~ 283 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTN 283 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSS
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCC
Confidence 3688887754322223333322222334567888887
No 316
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.11 E-value=3.7 Score=35.08 Aligned_cols=66 Identities=9% Similarity=0.054 Sum_probs=39.6
Q ss_pred CCeEEEEecCcEEEEEeCC--ceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCc-EEEEEcCCCeEEEE
Q psy4771 72 KGDLYMGVDGGHILKLSGG--KLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFG-LYKVNVTTGQTEQL 147 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~g-v~~vd~~~g~~~~l 147 (337)
++.|-++ .++.|..|+.. +........ .....-..+++.++|+.+++-...+ |...|.++++....
T Consensus 36 ~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~---------~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 36 GNVLAVA-LDNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCEEEEE-eCCEEEEEECCCCCEEEEEEec---------CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 4433344 47888888863 332222221 1223457899999997776655555 77788887765443
No 317
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.49 E-value=1.1 Score=44.35 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=60.6
Q ss_pred CCccEEEcCCCc--EEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccc--eeeEEEccCCCEEEEEeCC-
Q psy4771 193 IPNSVTVDSDGM--VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHF--ANGVELSADESFVIVAETM- 267 (337)
Q Consensus 193 ~pn~v~vd~~G~--lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~--p~gia~~~dg~~lyva~~~- 267 (337)
...++++++||+ +|..+.+.. ....|+.+|.++|+.... .+.. ..+++|+ ||+.||++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~-----------~~~~i~v~dl~tg~~~~~--~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGS-----------DWREIHLMDVESKQPLET--PLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSC-----------CEEEEEEEETTTCSEEEE--EEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred EEEEEEECCCCCEEEEEEecCCC-----------ceEEEEEEECCCCCCCcc--ccCCceeccEEEe-CCCEEEEEEecC
Confidence 456789999997 444443321 113788999998875332 2222 2578999 99988877644
Q ss_pred -----------CCEEEEEEeeCCCCCceeeeecCC--CCCCCceeECCCCC-EEEEe
Q psy4771 268 -----------SSRVHRYYLKGPKQGKSEVFIDGL--PGLPDNVKRDSKGN-FLVSL 310 (337)
Q Consensus 268 -----------~~~I~~~~~~g~~~~~~~~~~~~~--~g~Pdgi~~d~dG~-l~va~ 310 (337)
..+|+++++.........++.... +..-.++.+++||+ ++++.
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 256888876433222223332211 11123677888997 44443
No 318
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.84 E-value=3.7 Score=41.14 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=45.5
Q ss_pred ccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCCCee--EEEec--cccceeeEEEccCCCEEEEEeC--C
Q psy4771 195 NSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKN--KVLIA--NLHFANGVELSADESFVIVAET--M 267 (337)
Q Consensus 195 n~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~--~~~~~--~~~~p~gia~~~dg~~lyva~~--~ 267 (337)
.++++++||+ |+++..... .....|++++..+++. ..+.. .-.+-.++.+++||++|+++.. .
T Consensus 224 ~~~~WspDg~~l~y~~~d~~----------~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDET----------LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE 293 (751)
T ss_dssp SCCEECSSTTEEEEEEECTT----------CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS
T ss_pred eeEEEecCCCEEEEEEECCC----------CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC
Confidence 5678889885 666543211 0012678888766542 22221 1234457889999999887653 3
Q ss_pred CCEEEEEEeeCC
Q psy4771 268 SSRVHRYYLKGP 279 (337)
Q Consensus 268 ~~~I~~~~~~g~ 279 (337)
...|+.++++++
T Consensus 294 ~~~l~~~d~~~~ 305 (751)
T 2xe4_A 294 TAEVHLLDLRKG 305 (751)
T ss_dssp CEEEEEEESSSC
T ss_pred CceEEEEECCCC
Confidence 467888888654
No 319
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.71 E-value=7.5 Score=35.25 Aligned_cols=51 Identities=14% Similarity=0.139 Sum_probs=33.4
Q ss_pred CCccEEEEcCCCCeeEEEecc-cccee-eEEEccCCCEEEEEeCCCCEEEEEEe
Q psy4771 225 GSGRLIQYNPKTKKNKVLIAN-LHFAN-GVELSADESFVIVAETMSSRVHRYYL 276 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~~~~~-~~~p~-gia~~~dg~~lyva~~~~~~I~~~~~ 276 (337)
.+|.|..+|..+++......+ ..... .++|+|||++|+- -...++|..+++
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS-GS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA-GQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE-ECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE-EECCCcEEEecC
Confidence 456888888888876544433 23344 4899999986554 455677777664
No 320
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=91.55 E-value=8 Score=35.26 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=40.8
Q ss_pred EEEeeCCeEEEEecCcEEEEEeCCceeEEEecCccccCccccCccCCcceEEECCCCcEEEEECCC-cEEEEEcCCCeEE
Q psy4771 67 AVVKHKGDLYMGVDGGHILKLSGGKLVPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYF-GLYKVNVTTGQTE 145 (337)
Q Consensus 67 ~i~~~~g~ly~d~~~g~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~-gv~~vd~~~g~~~ 145 (337)
++..++..+.++..+|.|..|+..+.+....+. ...+....+++ +++++++-... .|...|.++++..
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT---------GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEEC---------CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc---------CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 344456667788999999999874433332221 11234567777 45454443344 4888888777644
Q ss_pred E
Q psy4771 146 Q 146 (337)
Q Consensus 146 ~ 146 (337)
.
T Consensus 207 ~ 207 (435)
T 1p22_A 207 N 207 (435)
T ss_dssp E
T ss_pred E
Confidence 3
No 321
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.98 E-value=8.7 Score=34.65 Aligned_cols=52 Identities=19% Similarity=0.051 Sum_probs=35.9
Q ss_pred CCccEEEEcCCCCeeEE-EeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeC
Q psy4771 225 GSGRLIQYNPKTKKNKV-LIANLHFANGVELSADESFVIVAETMSSRVHRYYLKG 278 (337)
Q Consensus 225 ~~G~v~~~d~~~~~~~~-~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g 278 (337)
.+|.|..+|..+++... ....-..-..++|+|||+.|.++. ...+..+++.|
T Consensus 337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 45688888887765433 333334568899999999887776 45677777654
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.07 E-value=9.5 Score=33.64 Aligned_cols=99 Identities=12% Similarity=0.141 Sum_probs=47.5
Q ss_pred CccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc-ccceeeEEEccCCCEEEEEeCCCCEEE
Q psy4771 194 PNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN-LHFANGVELSADESFVIVAETMSSRVH 272 (337)
Q Consensus 194 pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyva~~~~~~I~ 272 (337)
+.++++.+++++|++.. .|.|++-+-.+...+.+..+ .....+++++++++.+.+.. .+.++
T Consensus 124 ~~~i~~~~~~~~~~~~~---------------~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~--~G~~~ 186 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITN---------------VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS--RGSFY 186 (327)
T ss_dssp EEEEEEEETTEEEEEET---------------TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET--TSSEE
T ss_pred eEEEEEECCCCEEEEeC---------------CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC--CCcEE
Confidence 45666666667665542 23555543222233333322 12346788888886443433 34565
Q ss_pred EEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 273 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
+-.-.++.. -+.+....+.....++++++|++|++..
T Consensus 187 ~S~d~gG~t--W~~~~~~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 187 STWEPGQTA--WEPHNRTTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp EEECTTCSS--CEEEECCSSSCEEEEEECTTSCEEEEET
T ss_pred EEeCCCCCc--eeECCCCCCCccceeEECCCCCEEEEeC
Confidence 544221211 1111111122234667777778777653
No 323
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=87.57 E-value=18 Score=35.30 Aligned_cols=82 Identities=21% Similarity=0.080 Sum_probs=52.0
Q ss_pred ceEEECCCCcEEEEECCC--cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 115 LGIKFDKNGALHVADAYF--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 115 ~Gl~~d~~G~lyVad~~~--gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
.+.++..+|+|||.-... .+.++|+.+++-..+... . ...
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~----~----------------------------------~~R 287 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM----Q----------------------------------VAR 287 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC----S----------------------------------SCC
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC----C----------------------------------ccc
Confidence 357777889999996432 499999987766554321 0 112
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEE
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVL 242 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~ 242 (337)
.-..+++-++|+||+.-....- ......+.+||+.+++.+.+
T Consensus 288 ~~~s~~~~~dg~iyv~GG~~~~--------~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 288 GYQSSATMSDGRVFTIGGSWSG--------GVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp SSCEEEECTTSCEEEECCCCCS--------SSCCCCEEEEETTTTEEEEE
T ss_pred cccceEEecCCeEEEEeCcccC--------CcccccceEeCCCCCcceeC
Confidence 2345666678899987652110 01123688999998887665
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=85.49 E-value=17 Score=31.27 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=37.1
Q ss_pred CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeC-----CCCEEEE
Q psy4771 202 DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAET-----MSSRVHR 273 (337)
Q Consensus 202 ~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~-----~~~~I~~ 273 (337)
+++||+.-.... ......+++||+.+++.+.+. .+..+ ..+++. ++ .||+.-. ..+.+++
T Consensus 200 ~~~i~v~GG~~~---------~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~ 267 (306)
T 3ii7_A 200 KDKIFAVGGQNG---------LGGLDNVEYYDIKLNEWKMVS-PMPWKGVTVKCAAV-GS-IVYVLAGFQGVGRLGHILE 267 (306)
T ss_dssp TTEEEEECCEET---------TEEBCCEEEEETTTTEEEECC-CCSCCBSCCEEEEE-TT-EEEEEECBCSSSBCCEEEE
T ss_pred CCEEEEEeCCCC---------CCCCceEEEeeCCCCcEEECC-CCCCCccceeEEEE-CC-EEEEEeCcCCCeeeeeEEE
Confidence 567887643211 011237899999988876553 22222 223332 44 6888754 2367888
Q ss_pred EEeeC
Q psy4771 274 YYLKG 278 (337)
Q Consensus 274 ~~~~g 278 (337)
|+++.
T Consensus 268 yd~~~ 272 (306)
T 3ii7_A 268 YNTET 272 (306)
T ss_dssp EETTT
T ss_pred EcCCC
Confidence 88753
No 325
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=85.11 E-value=0.7 Score=42.02 Aligned_cols=14 Identities=7% Similarity=0.268 Sum_probs=9.8
Q ss_pred CccEEEEcCCCCee
Q psy4771 226 SGRLIQYNPKTKKN 239 (337)
Q Consensus 226 ~G~v~~~d~~~~~~ 239 (337)
+|.|+.+|.++|+.
T Consensus 182 dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 182 DGLVVTVDSESGDV 195 (369)
T ss_dssp SCEEEEECTTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 35777888777765
No 326
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=82.88 E-value=26 Score=31.38 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=34.4
Q ss_pred eEEEcc-CCCEEEEEeCCCCEEEEEEeeCCCCCceeeeecCCCCCCCceeECCCCCEEEEec
Q psy4771 251 GVELSA-DESFVIVAETMSSRVHRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 311 (337)
Q Consensus 251 gia~~~-dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pdgi~~d~dG~l~va~~ 311 (337)
+.++.+ .++.+.++-...++|..++...+... ..+.. .......+++++||+++++..
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~--~~~~~-~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSN--SIPIQ-LGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCC--EEEEE-CSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEE--EEecC-CCCcEEEEEEcCCCCEEEEEe
Confidence 344443 44456666667789999887643221 22222 122246899999999766654
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=82.47 E-value=4.4 Score=36.55 Aligned_cols=18 Identities=11% Similarity=0.001 Sum_probs=13.7
Q ss_pred CCeEEEEecCcEEEEEeC
Q psy4771 72 KGDLYMGVDGGHILKLSG 89 (337)
Q Consensus 72 ~g~ly~d~~~g~I~~~~~ 89 (337)
++.+|+...+|+|+-++.
T Consensus 10 ~~~V~v~t~dG~l~Ald~ 27 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDR 27 (339)
T ss_dssp EEEEEEEETTSCEEEEET
T ss_pred CCEEEEEeCCCeEEEEEC
Confidence 557777778888888876
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.56 E-value=25 Score=30.36 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=19.6
Q ss_pred CCCcEEEEECC-------CcEEEEEcCCCeEEEEe
Q psy4771 121 KNGALHVADAY-------FGLYKVNVTTGQTEQLI 148 (337)
Q Consensus 121 ~~G~lyVad~~-------~gv~~vd~~~g~~~~l~ 148 (337)
-+|.|||.-.. ..++++|+++.+-+.+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~ 191 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA 191 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC
Confidence 46789987421 23899999888766664
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.43 E-value=25 Score=30.37 Aligned_cols=28 Identities=7% Similarity=-0.080 Sum_probs=19.2
Q ss_pred CCCcEEEEECC-------CcEEEEEcCCCeEEEEe
Q psy4771 121 KNGALHVADAY-------FGLYKVNVTTGQTEQLI 148 (337)
Q Consensus 121 ~~G~lyVad~~-------~gv~~vd~~~g~~~~l~ 148 (337)
-++.|||.-.. ..+.++|+.+.+-+.+.
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~ 181 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA 181 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC
Confidence 35689998532 23889999887766554
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=79.23 E-value=29 Score=29.58 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCcEEEEECC------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCc
Q psy4771 122 NGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPN 195 (337)
Q Consensus 122 ~G~lyVad~~------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn 195 (337)
++.|||.-.. ..+.++|+.+.+-+.+... .. +. .-.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~----------------------------------~r-~~~ 153 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM---QT----------------------------------AR-EGA 153 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC---SS----------------------------------CC-BSC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCC---CC----------------------------------Cc-ccc
Confidence 5789998432 2388999988877766531 00 11 112
Q ss_pred cEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----
Q psy4771 196 SVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM----- 267 (337)
Q Consensus 196 ~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~----- 267 (337)
.+++ -++.||+.--... ......+++||+.+++.+.+. .+..| ..++.. ++ .||+.-..
T Consensus 154 ~~~~-~~~~iyv~GG~~~---------~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 154 GLVV-ASGVIYCLGGYDG---------LNILNSVEKYDPHTGHWTNVT-PMATKRSGAGVALL-ND-HIYVVGGFDGTAH 220 (301)
T ss_dssp EEEE-ETTEEEEECCBCS---------SCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSB
T ss_pred eEEE-ECCEEEEECCCCC---------CcccceEEEEeCCCCcEEeCC-CCCcccccceEEEE-CC-EEEEEeCCCCCcc
Confidence 2222 2578887653211 012347999999988876653 22222 123332 44 68887543
Q ss_pred CCEEEEEEeeC
Q psy4771 268 SSRVHRYYLKG 278 (337)
Q Consensus 268 ~~~I~~~~~~g 278 (337)
.+.|++|+++.
T Consensus 221 ~~~v~~yd~~~ 231 (301)
T 2vpj_A 221 LSSVEAYNIRT 231 (301)
T ss_dssp CCCEEEEETTT
T ss_pred cceEEEEeCCC
Confidence 35788898753
No 331
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=78.35 E-value=17 Score=35.49 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=45.6
Q ss_pred CCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeC-C-
Q psy4771 193 IPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAET-M- 267 (337)
Q Consensus 193 ~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~-~- 267 (337)
+..++++..+|+||+.-... ...+++||+.+++.+.+. .+..+ ..+++.+||+ |||.-. .
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~-------------~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~-iyv~GG~~~ 308 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGND-------------AKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGR-VFTIGGSWS 308 (656)
T ss_dssp SSCEEEECTTSCEEEECSSS-------------TTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSC-EEEECCCCC
T ss_pred ccccccCCCCCCEEEeCCCC-------------CCceEEecCcCCceeECC-CCCccccccceEEecCCe-EEEEeCccc
Confidence 34567888889999876432 127899999888766543 33322 3456666775 777654 1
Q ss_pred ----CCEEEEEEee
Q psy4771 268 ----SSRVHRYYLK 277 (337)
Q Consensus 268 ----~~~I~~~~~~ 277 (337)
.+.+.+|++.
T Consensus 309 ~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 309 GGVFEKNGEVYSPS 322 (656)
T ss_dssp SSSCCCCEEEEETT
T ss_pred CCcccccceEeCCC
Confidence 2568888874
No 332
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=72.36 E-value=55 Score=29.48 Aligned_cols=151 Identities=16% Similarity=0.081 Sum_probs=74.2
Q ss_pred eEEECC---CCcEEEEECCCc-EEEEEcCCCeE-EEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCC
Q psy4771 116 GIKFDK---NGALHVADAYFG-LYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAK 190 (337)
Q Consensus 116 Gl~~d~---~G~lyVad~~~g-v~~vd~~~g~~-~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~ 190 (337)
.++|.+ +|.++++-+..+ |...|.++|+. ..+.. +. ..
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g------~~-------------------------------~~ 225 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI------DD-------------------------------SY 225 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC------CC---------------------------------
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC------CC-------------------------------cc
Confidence 456655 668888865555 77779988864 34321 00 01
Q ss_pred CCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccceee-----EEEccCCCEEEEEe
Q psy4771 191 PQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFANG-----VELSADESFVIVAE 265 (337)
Q Consensus 191 ~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p~g-----ia~~~dg~~lyva~ 265 (337)
......+++.++|.+.++-+.... .+ .......++.|..+|+++++...... ..+|.| +..+.++. +.++-
T Consensus 226 v~~v~~vafSpdG~~lvs~s~~~~-~w-~laSGs~D~tIklWd~~tgk~l~v~~-~~~p~Gh~~~~lsg~~sg~-~lASg 301 (356)
T 2w18_A 226 QASVCHKAYSEMGLLFIVLSHPCA-KE-SESLRSPVFQLIVINPKTTLSVGVML-YCLPPGQAGRFLEGDVKDH-CAAAI 301 (356)
T ss_dssp -CCCEEEEEEETTEEEEEEC--------------CCEEEEEEETTTTEEEEEEE-ECCCTTCCCCEEEEEEETT-EEEEE
T ss_pred eeeeEEEEECCCCCEEEEeccCCC-cc-eeeccCCCcEEEEEECCCCEEEEEEE-eeccCCCcceeEccccCCC-EEEEE
Confidence 234567789999986665432110 00 00123345567778888776432210 000111 11111232 44554
Q ss_pred CCCCEEEEEEeeCCCCCceeeeecCCCCCCC-ceeECCCCCEEEEe
Q psy4771 266 TMSSRVHRYYLKGPKQGKSEVFIDGLPGLPD-NVKRDSKGNFLVSL 310 (337)
Q Consensus 266 ~~~~~I~~~~~~g~~~~~~~~~~~~~~g~Pd-gi~~d~dG~l~va~ 310 (337)
...+.|...++..++. ...+..+... +. .+++.+||++.++.
T Consensus 302 S~DgTIkIWDl~tGk~--l~tL~gH~~~-vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 302 LTSGTIAIWDLLLGQC--TALLPPVSDQ-HWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp ETTSCEEEEETTTCSE--EEEECCC--C-CCCEEEECSSSSEEEEE
T ss_pred cCCCcEEEEECCCCcE--EEEecCCCCC-eEEEEEECCCCCEEEEE
Confidence 4567888888753321 2222221111 33 47899999866554
No 333
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=72.33 E-value=44 Score=28.34 Aligned_cols=64 Identities=13% Similarity=0.114 Sum_probs=35.8
Q ss_pred CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCCC-----CEEEE
Q psy4771 202 DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETMS-----SRVHR 273 (337)
Q Consensus 202 ~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~~-----~~I~~ 273 (337)
++.||+...... ......++.||+++++.+.+. .+..+ .+++.. ++ .||+.-... +.|++
T Consensus 206 ~~~i~v~GG~~~---------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~ 273 (301)
T 2vpj_A 206 NDHIYVVGGFDG---------TAHLSSVEAYNIRTDSWTTVT-SMTTPRCYVGATVL-RG-RLYAIAGYDGNSLLSSIEC 273 (301)
T ss_dssp TTEEEEECCBCS---------SSBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBEEEEEE
T ss_pred CCEEEEEeCCCC---------CcccceEEEEeCCCCcEEECC-CCCCcccceeEEEE-CC-EEEEEcCcCCCcccccEEE
Confidence 567887654321 011347999999988876654 22222 233332 44 587765322 46777
Q ss_pred EEee
Q psy4771 274 YYLK 277 (337)
Q Consensus 274 ~~~~ 277 (337)
|+++
T Consensus 274 yd~~ 277 (301)
T 2vpj_A 274 YDPI 277 (301)
T ss_dssp EETT
T ss_pred EcCC
Confidence 7764
No 334
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=70.02 E-value=50 Score=28.03 Aligned_cols=64 Identities=14% Similarity=0.213 Sum_probs=35.4
Q ss_pred CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEEE
Q psy4771 202 DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVHR 273 (337)
Q Consensus 202 ~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~~ 273 (337)
++.||+.-.... ......+++||+.+++.+.+. .+..+ .+++.. ++ .||+.-.. .+.|.+
T Consensus 204 ~~~iyv~GG~~~---------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~ 271 (302)
T 2xn4_A 204 NNLLYAVGGHDG---------PLVRKSVEVYDPTTNAWRQVA-DMNMCRRNAGVCAV-NG-LLYVVGGDDGSCNLASVEY 271 (302)
T ss_dssp TTEEEEECCBSS---------SSBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEE
T ss_pred CCEEEEECCCCC---------CcccceEEEEeCCCCCEeeCC-CCCCccccCeEEEE-CC-EEEEECCcCCCcccccEEE
Confidence 568887753211 011347999999988876654 22222 233332 44 57776432 245777
Q ss_pred EEee
Q psy4771 274 YYLK 277 (337)
Q Consensus 274 ~~~~ 277 (337)
|+++
T Consensus 272 yd~~ 275 (302)
T 2xn4_A 272 YNPT 275 (302)
T ss_dssp EETT
T ss_pred EcCC
Confidence 7764
No 335
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=69.73 E-value=52 Score=28.03 Aligned_cols=49 Identities=18% Similarity=0.204 Sum_probs=30.0
Q ss_pred ccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEEEEEeeC
Q psy4771 227 GRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVHRYYLKG 278 (337)
Q Consensus 227 G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~~~~~~g 278 (337)
..+++||+.+.+.+.+.. +..+ ..+++. ++ .||+.-.. .+.+++|++..
T Consensus 169 ~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCP-MIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTT
T ss_pred ceEEEeCCCCCeEEECCC-ccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCC
Confidence 479999999888766542 2222 233333 44 68887432 25688888753
No 336
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=69.16 E-value=68 Score=29.18 Aligned_cols=127 Identities=14% Similarity=0.084 Sum_probs=69.0
Q ss_pred CccEEEeeCCeEEEEecCcEEEEEeCCce---eEEEecCccccCccccCccCCcceEEECCCCcEEEEECCCcEEEEEcC
Q psy4771 64 GPEAVVKHKGDLYMGVDGGHILKLSGGKL---VPVVKLGKDCYGFKYEQQCGRPLGIKFDKNGALHVADAYFGLYKVNVT 140 (337)
Q Consensus 64 ~P~~i~~~~g~ly~d~~~g~I~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~P~Gl~~d~~G~lyVad~~~gv~~vd~~ 140 (337)
++..+++++..|+++ .++.|..|+..+. .....+. .....+..-+. ++.++.....|+.+|.+
T Consensus 89 ~V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~------------~~v~~i~~~~p-~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 89 DVIFVCFHGDQVLVS-TRNALYSLDLEELSEFRTVTSFE------------KPVFQLKNVNN-TLVILNSVNDLSALDLR 154 (388)
T ss_dssp TEEEEEEETTEEEEE-ESSEEEEEESSSTTCEEEEEECS------------SCEEEEEECSS-EEEEEETTSEEEEEETT
T ss_pred CeeEEEECCCEEEEE-cCCcEEEEEchhhhccCccceee------------cceeeEEecCC-CEEEEECCCCEEEEEcc
Confidence 356667756677766 6777888875221 1111111 01223333322 35555544447777776
Q ss_pred CCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCCccEEEcCCCcEEEEcCCCCccCceee
Q psy4771 141 TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFE 220 (337)
Q Consensus 141 ~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~ 220 (337)
++....+.. ....++++++| +.+.-
T Consensus 155 ~~~~~~~~~-------------------------------------------~Vs~v~WSpkG-~~vg~----------- 179 (388)
T 1xip_A 155 TKSTKQLAQ-------------------------------------------NVTSFDVTNSQ-LAVLL----------- 179 (388)
T ss_dssp TCCEEEEEE-------------------------------------------SEEEEEECSSE-EEEEE-----------
T ss_pred CCccccccC-------------------------------------------CceEEEEcCCc-eEEEE-----------
Confidence 555433221 25678888888 33222
Q ss_pred eeecCCccEEEEcCCCCee---EEE------ec---cccceeeEEEccCCCEEEE
Q psy4771 221 GLTSGSGRLIQYNPKTKKN---KVL------IA---NLHFANGVELSADESFVIV 263 (337)
Q Consensus 221 ~~~~~~G~v~~~d~~~~~~---~~~------~~---~~~~p~gia~~~dg~~lyv 263 (337)
.+|.+..|++++++. ..+ .+ +-.....|++.+++.++.+
T Consensus 180 ----~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 ----KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ----TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ----cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 245666667777663 223 11 2355778999988865543
No 337
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=64.93 E-value=82 Score=28.61 Aligned_cols=82 Identities=16% Similarity=0.107 Sum_probs=46.3
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEEEeCCCCEEEEEEeeCCCCCceeee------ecC--CCCCCCc
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIVAETMSSRVHRYYLKGPKQGKSEVF------IDG--LPGLPDN 297 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyva~~~~~~I~~~~~~g~~~~~~~~~------~~~--~~g~Pdg 297 (337)
+|.|+.+|.++++...+. .....+||+|+| +++.- ..+.|..|.+++........+ .++ ....+..
T Consensus 145 dG~L~v~dl~~~~~~~~~---~~Vs~v~WSpkG--~~vg~-~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~s 218 (388)
T 1xip_A 145 VNDLSALDLRTKSTKQLA---QNVTSFDVTNSQ--LAVLL-KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLS 218 (388)
T ss_dssp TSEEEEEETTTCCEEEEE---ESEEEEEECSSE--EEEEE-TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEE
T ss_pred CCCEEEEEccCCcccccc---CCceEEEEcCCc--eEEEE-cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEE
Confidence 456667776655543332 356789999999 33333 356788888776432112222 110 1233566
Q ss_pred eeECCCCCEEEEecCC
Q psy4771 298 VKRDSKGNFLVSLVCP 313 (337)
Q Consensus 298 i~~d~dG~l~va~~~~ 313 (337)
|+.-+++.+.|+....
T Consensus 219 I~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 219 VTILSPQDFLAVFGNV 234 (388)
T ss_dssp EEESSSSEEEEEEECC
T ss_pred EEEecCCeEEEEEcCC
Confidence 7777777666655444
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=62.93 E-value=87 Score=30.36 Aligned_cols=107 Identities=14% Similarity=0.040 Sum_probs=64.3
Q ss_pred CCCccEEEcCCCc-EEEEcCCCCccCceeeeeecCCccEEEEcCCC------Cee-------EEEeccccceeeEEEccC
Q psy4771 192 QIPNSVTVDSDGM-VYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKT------KKN-------KVLIANLHFANGVELSAD 257 (337)
Q Consensus 192 ~~pn~v~vd~~G~-lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~------~~~-------~~~~~~~~~p~gia~~~d 257 (337)
++|+++-++|||+ ++++.-... .+.+||-+. +++ ..-..-.-.|-=.+|+++
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsp--------------tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSP--------------TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGR 388 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSS--------------BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCC--------------eEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCC
Confidence 6899999999997 666554322 344443221 000 000112346777899999
Q ss_pred CCEEEEEeCCCCEEEEEEeeC-------CCCCceeeeec--CCCC---CCCceeECCCCCEEEEecCC
Q psy4771 258 ESFVIVAETMSSRVHRYYLKG-------PKQGKSEVFID--GLPG---LPDNVKRDSKGNFLVSLVCP 313 (337)
Q Consensus 258 g~~lyva~~~~~~I~~~~~~g-------~~~~~~~~~~~--~~~g---~Pdgi~~d~dG~l~va~~~~ 313 (337)
| ..|.+-.-.+.|.+.+++. .+......-.+ -.|| .+.|=..++||+.+++...-
T Consensus 389 G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 389 G-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp S-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred C-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 9 8999999999999999863 11111100011 1122 24566678999999988644
No 339
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=59.72 E-value=82 Score=26.85 Aligned_cols=65 Identities=14% Similarity=0.205 Sum_probs=37.8
Q ss_pred CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEEE
Q psy4771 202 DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVHR 273 (337)
Q Consensus 202 ~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~~ 273 (337)
++.||+.--.... .....+++||+.+.+.+.+. .+..| ..+++. ++ .||+.-.. .+.+++
T Consensus 168 ~~~iyv~GG~~~~---------~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~ 235 (308)
T 1zgk_A 168 NRLLYAVGGFDGT---------NRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVER 235 (308)
T ss_dssp TTEEEEECCBCSS---------CBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEE
T ss_pred CCEEEEEeCCCCC---------CcCceEEEEeCCCCeEeeCC-CCCCccccceEEEE-CC-EEEEEeCCCCCCccceEEE
Confidence 5788876432110 11347999999988776543 22222 233333 44 68887533 367899
Q ss_pred EEeeC
Q psy4771 274 YYLKG 278 (337)
Q Consensus 274 ~~~~g 278 (337)
|+++.
T Consensus 236 yd~~~ 240 (308)
T 1zgk_A 236 YDVET 240 (308)
T ss_dssp EETTT
T ss_pred EeCCC
Confidence 98754
No 340
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=59.07 E-value=1.4e+02 Score=29.42 Aligned_cols=59 Identities=12% Similarity=0.234 Sum_probs=38.6
Q ss_pred CCccEEEcCC--CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc-------cceeeEEEcc-CCCEEE
Q psy4771 193 IPNSVTVDSD--GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL-------HFANGVELSA-DESFVI 262 (337)
Q Consensus 193 ~pn~v~vd~~--G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~-------~~p~gia~~~-dg~~ly 262 (337)
...+|++++. +.+|+... .|.||+.+..+...+.+.... ..-..|+++| +.+.+|
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~---------------~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~ 88 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAA---------------IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVY 88 (737)
T ss_dssp CCCEEEECSSSTTCEEEECS---------------SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEE
T ss_pred eeeEEEECCCCCCEEEEEec---------------CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEE
Confidence 5789999985 56887542 247888776555555544322 2346889997 456799
Q ss_pred EEeC
Q psy4771 263 VAET 266 (337)
Q Consensus 263 va~~ 266 (337)
++..
T Consensus 89 v~~~ 92 (737)
T 2cn3_A 89 IVAG 92 (737)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8863
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=57.92 E-value=89 Score=26.71 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=21.2
Q ss_pred CccEEEEcCCCCeeEEEeccccceeeEEEccCCCEEEE
Q psy4771 226 SGRLIQYNPKTKKNKVLIANLHFANGVELSADESFVIV 263 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv 263 (337)
...+++||+++.+.+.+........+.++- ++ .||+
T Consensus 277 ~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~-~~-~iyi 312 (318)
T 2woz_A 277 VNDIWKYEDDKKEWAGMLKEIRYASGASCL-AT-RLNL 312 (318)
T ss_dssp CCCEEEEETTTTEEEEEESCCGGGTTCEEE-EE-EEEG
T ss_pred eeeEEEEeCCCCEehhhcccccccccceee-CC-EEEE
Confidence 357999999998887764333333343333 22 4654
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=57.55 E-value=1.5e+02 Score=29.11 Aligned_cols=114 Identities=14% Similarity=0.126 Sum_probs=68.4
Q ss_pred eEEECC-CCcEEEEECC-------CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccC
Q psy4771 116 GIKFDK-NGALHVADAY-------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEID 187 (337)
Q Consensus 116 Gl~~d~-~G~lyVad~~-------~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~ 187 (337)
+++.-. +|.|||.-.. +.++++|+.+.+-+.+... |
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~-----------p------------------------- 487 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL-----------S------------------------- 487 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC-----------S-------------------------
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC-----------C-------------------------
Confidence 445444 7789998431 2388999988766655421 0
Q ss_pred CCCCCCCccEEEcCCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEecc--cc----ceeeEEEccCCCEE
Q psy4771 188 GAKPQIPNSVTVDSDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIAN--LH----FANGVELSADESFV 261 (337)
Q Consensus 188 ~~~~~~pn~v~vd~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~--~~----~p~gia~~~dg~~l 261 (337)
....-...++-.+|.||+.-.... .+.+++||+.+.+.+.+... +. ....++++.+.+.|
T Consensus 488 --~~R~~h~~~~~~~~~iyv~GG~~~------------~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 488 --HTRFRHSACSLPDGNVLILGGVTE------------GPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp --BCCBSCEEEECTTSCEEEECCBCS------------SCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred --CCcccceEEEEcCCEEEEECCCCC------------CCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 011223444434788988754321 11799999999887665531 22 22235556554579
Q ss_pred EEEeCC-------CCEEEEEEeeCC
Q psy4771 262 IVAETM-------SSRVHRYYLKGP 279 (337)
Q Consensus 262 yva~~~-------~~~I~~~~~~g~ 279 (337)
||.-.. .+.+++|++...
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EEECCcCCCCCeeeCcEEEEEccCC
Confidence 987643 367999998754
No 343
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=56.05 E-value=92 Score=26.30 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=30.1
Q ss_pred ccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEEEEEeeC
Q psy4771 227 GRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVHRYYLKG 278 (337)
Q Consensus 227 G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~~~~~~g 278 (337)
..+++||+.+++.+.+. .+..+ ..+++. ++ .||+.-.. .+.+++|+++.
T Consensus 173 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 173 STVECYNATTNEWTYIA-EMSTRRSGAGVGVL-NN-LLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp CCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBSSSSBCCCEEEEETTT
T ss_pred cEEEEEeCCCCcEEECC-CCccccccccEEEE-CC-EEEEECCCCCCcccceEEEEeCCC
Confidence 47899999988876653 22222 233332 44 68887532 35788998753
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=54.67 E-value=1e+02 Score=26.28 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=35.4
Q ss_pred CCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEEE
Q psy4771 202 DGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVHR 273 (337)
Q Consensus 202 ~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~~ 273 (337)
++.||+..-... ......+++||+.+.+.+.+. .+..| .++++. ++ .||+.-.. .+.|++
T Consensus 215 ~~~iyv~GG~~~---------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~ 282 (308)
T 1zgk_A 215 HNCIYAAGGYDG---------QDQLNSVERYDVETETWTFVA-PMKHRRSALGITVH-QG-RIYVLGGYDGHTFLDSVEC 282 (308)
T ss_dssp TTEEEEECCBCS---------SSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEE
T ss_pred CCEEEEEeCCCC---------CCccceEEEEeCCCCcEEECC-CCCCCccceEEEEE-CC-EEEEEcCcCCCcccceEEE
Confidence 567887653321 011347999999988876544 33222 233332 34 57776431 345667
Q ss_pred EEee
Q psy4771 274 YYLK 277 (337)
Q Consensus 274 ~~~~ 277 (337)
|+++
T Consensus 283 yd~~ 286 (308)
T 1zgk_A 283 YDPD 286 (308)
T ss_dssp EETT
T ss_pred EcCC
Confidence 7654
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=47.94 E-value=1.3e+02 Score=25.60 Aligned_cols=67 Identities=22% Similarity=0.278 Sum_probs=37.2
Q ss_pred CCCcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeCC-----CCEEE
Q psy4771 201 SDGMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAETM-----SSRVH 272 (337)
Q Consensus 201 ~~G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~~-----~~~I~ 272 (337)
-++.||+.--.... ......+++||+.+.+.+.+. .+..| .+++.. ++ .||+.-.. .+.+.
T Consensus 147 ~~~~iyv~GG~~~~--------~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 147 HMDLVYVIGGKGSD--------RKCLNKMCVYDPKKFEWKELA-PMQTARSLFGATVH-DG-RIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp ETTEEEEECCBCTT--------SCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE-TT-EEEEEEEECSSSEEEEEE
T ss_pred ECCEEEEEeCCCCC--------CcccceEEEEeCCCCeEEECC-CCCCchhceEEEEE-CC-EEEEEeccCCCCccceEE
Confidence 45678876543110 112347999999988776544 22222 233332 44 68876432 23688
Q ss_pred EEEeeC
Q psy4771 273 RYYLKG 278 (337)
Q Consensus 273 ~~~~~g 278 (337)
+|+++.
T Consensus 216 ~yd~~~ 221 (315)
T 4asc_A 216 VYSITD 221 (315)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 888753
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=42.84 E-value=2.6e+02 Score=27.56 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=25.5
Q ss_pred CCcceEEECCC--CcEEEEECCCcEEEEEcCCCeEEEE
Q psy4771 112 GRPLGIKFDKN--GALHVADAYFGLYKVNVTTGQTEQL 147 (337)
Q Consensus 112 ~~P~Gl~~d~~--G~lyVad~~~gv~~vd~~~g~~~~l 147 (337)
++..+|++++. +.+|+.....+|++-+-.+..-+.+
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i 60 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPL 60 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEEC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEEC
Confidence 37789999987 5888875446788887555555544
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.75 E-value=1.2e+02 Score=27.06 Aligned_cols=28 Identities=29% Similarity=0.207 Sum_probs=21.2
Q ss_pred CCcEEEEECCCcEEEEEcCCCeEEEEec
Q psy4771 122 NGALHVADAYFGLYKVNVTTGQTEQLIS 149 (337)
Q Consensus 122 ~G~lyVad~~~gv~~vd~~~g~~~~l~~ 149 (337)
+|.+||+.....|+.+|.++|+...-..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~ 37 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIE 37 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 3578888765669999988888776654
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.58 E-value=1.7e+02 Score=25.23 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=28.9
Q ss_pred ccEEEEcCCCCeeEEEeccccce----eeEEEccCCCEEEEEeCC------CCEEEEEEe
Q psy4771 227 GRLIQYNPKTKKNKVLIANLHFA----NGVELSADESFVIVAETM------SSRVHRYYL 276 (337)
Q Consensus 227 G~v~~~d~~~~~~~~~~~~~~~p----~gia~~~dg~~lyva~~~------~~~I~~~~~ 276 (337)
..+++||+.+.+.+.+.. +..+ .++++. + +.|||.-.. .+.+++|++
T Consensus 168 ~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNK-G-DKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEE-T-TEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCC-CCCCCcccccEEEE-C-CEEEEEeeecCCCcccCceEEEEe
Confidence 479999999888766543 2211 333333 3 368887421 456888876
No 349
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=41.42 E-value=1.4e+02 Score=28.64 Aligned_cols=53 Identities=11% Similarity=0.176 Sum_probs=33.7
Q ss_pred CccEEEEcCCCCeeEEEec---cccceeeE----EEccCC----CEEEEEeCCCCEEEEEEeeCC
Q psy4771 226 SGRLIQYNPKTKKNKVLIA---NLHFANGV----ELSADE----SFVIVAETMSSRVHRYYLKGP 279 (337)
Q Consensus 226 ~G~v~~~d~~~~~~~~~~~---~~~~p~gi----a~~~dg----~~lyva~~~~~~I~~~~~~g~ 279 (337)
...||.+|.++|+...-.. ....++|+ .++.|+ +.+|+.|. .+.||||++.+.
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~ 285 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCS
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCC
Confidence 4578888888886533221 11233443 344443 47999996 579999999764
No 350
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.98 E-value=3.9e+02 Score=26.51 Aligned_cols=171 Identities=15% Similarity=0.148 Sum_probs=0.0
Q ss_pred EEEe---eCCeEEEEecCcEEEEEeC--CceeEEEecCccccCccccC-------ccCCcceEEECCCC--cEEEEECC-
Q psy4771 67 AVVK---HKGDLYMGVDGGHILKLSG--GKLVPVVKLGKDCYGFKYEQ-------QCGRPLGIKFDKNG--ALHVADAY- 131 (337)
Q Consensus 67 ~i~~---~~g~ly~d~~~g~I~~~~~--~~~~~~~~~g~~~~~~~~~~-------~~~~P~Gl~~d~~G--~lyVad~~- 131 (337)
+|++ +.+.+|+....+.|+|-+. ..++.+. . .......|++|+.. .+|++-..
T Consensus 19 ~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~------------~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~ 86 (789)
T 1sqj_A 19 GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLN------------DFIEAQDMNIMGTESIALDPNNPDRLYLAQGRY 86 (789)
T ss_dssp EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESC------------TTCCGGGGGGCSEEEEEEETTEEEEEEEEECSC
T ss_pred EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECc------------cCCCcccccCCceeEEEECCCCCCEEEEEeCcc
Q ss_pred -----CcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCC---------ccE
Q psy4771 132 -----FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIP---------NSV 197 (337)
Q Consensus 132 -----~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~p---------n~v 197 (337)
.+|++=+-.+..-+.+.. ++... ..+
T Consensus 87 ~~~~~~~v~~S~DgG~TW~~~~~----------------------------------------~~~~~~~~~~~~~~~~i 126 (789)
T 1sqj_A 87 VGDEWAAFYVSEDRGQSFTIYES----------------------------------------PFPMGANDMGRNNGERL 126 (789)
T ss_dssp TTSSCCEEEEESSTTSEEEEEEC----------------------------------------SSCCCTTSTTTTSCCCE
T ss_pred CCCcccEEEEECCCCCcceeccC----------------------------------------CcccCccCCCccceeEE
Q ss_pred EEcC--CCcEEEEc-CCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccc------cceeeEEEcc-CCCEEEEEeCC
Q psy4771 198 TVDS--DGMVYWSD-SSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANL------HFANGVELSA-DESFVIVAETM 267 (337)
Q Consensus 198 ~vd~--~G~lyvtd-~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~------~~p~gia~~~-dg~~lyva~~~ 267 (337)
++++ .+.+|+.. .. .||+=+-.+...+.+.... .....|+++| +++.||++...
T Consensus 127 av~p~~~~~v~~g~~~~----------------gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 127 AVNPFNSNEVWMGTRTE----------------GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEETTEEEEEEEECSSS----------------CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred EEcCCCCCEEEEEeccC----------------CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Q ss_pred CCEEEEEEeeCCCCCceeeeecCCCC---------CC---------CceeECC-CCCEEEE
Q psy4771 268 SSRVHRYYLKGPKQGKSEVFIDGLPG---------LP---------DNVKRDS-KGNFLVS 309 (337)
Q Consensus 268 ~~~I~~~~~~g~~~~~~~~~~~~~~g---------~P---------dgi~~d~-dG~l~va 309 (337)
...|++ ..++++.-+... .++. +| ..+++++ ++.+|++
T Consensus 191 ~~~v~~-S~DgG~TW~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 247 (789)
T 1sqj_A 191 PQGMYV-THDGGVSWEPVA---GQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVT 247 (789)
T ss_dssp TTCEEE-ESSTTSSCEECT---TCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEE
T ss_pred CCeEEE-EcCCCcCcccCC---CCcCccccccccccCcccccccccceeEEcCCCCeEEEE
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=25.17 E-value=4.8e+02 Score=25.35 Aligned_cols=121 Identities=7% Similarity=0.015 Sum_probs=65.8
Q ss_pred eEEECCCCcEEEEECCC---cEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCC
Q psy4771 116 GIKFDKNGALHVADAYF---GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQ 192 (337)
Q Consensus 116 Gl~~d~~G~lyVad~~~---gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~ 192 (337)
+.++-.+|.|||.-... .++.+|+.+.+-..+... |. .|. +-.
T Consensus 494 ~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~-----g~---~p~--------------------------~r~ 539 (695)
T 2zwa_A 494 SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPK-----DE---FFQ--------------------------NSL 539 (695)
T ss_dssp EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCS-----SG---GGG--------------------------SCC
T ss_pred eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCC-----CC---CCC--------------------------ccc
Confidence 45553477999985322 489999988876665431 10 000 111
Q ss_pred CCccEEEcCC-CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCe------eEEEeccc---cceeeEEEccCCCEEE
Q psy4771 193 IPNSVTVDSD-GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKK------NKVLIANL---HFANGVELSADESFVI 262 (337)
Q Consensus 193 ~pn~v~vd~~-G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~------~~~~~~~~---~~p~gia~~~dg~~ly 262 (337)
....++++.+ |.||+......- + ......+++||+.+.+ .+.+.... ..-.++++-.++ .||
T Consensus 540 ~~~a~v~~~~~~~iyv~GG~~~~--~-----~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~-~iy 611 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIILGGGFMD--Q-----TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPR-KLL 611 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBCTT--S-----SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETT-EEE
T ss_pred ceeEEEEeCCCCEEEEECCcCCC--C-----CeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCC-EEE
Confidence 1233555655 789987543110 0 0113478999998887 44443311 112234444334 688
Q ss_pred EEeC--------CCCEEEEEEeeC
Q psy4771 263 VAET--------MSSRVHRYYLKG 278 (337)
Q Consensus 263 va~~--------~~~~I~~~~~~g 278 (337)
|.-. ..+.|++|++..
T Consensus 612 v~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 612 IVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp EECCBCSSCCCCTTTSEEEEETTT
T ss_pred EECCccCCCCCCCCCeEEEEECCC
Confidence 8653 245688888753
No 352
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=21.07 E-value=5.5e+02 Score=24.56 Aligned_cols=138 Identities=9% Similarity=0.088 Sum_probs=0.0
Q ss_pred CcceEEECC-CCcEEEEECCCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCC---
Q psy4771 113 RPLGIKFDK-NGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDG--- 188 (337)
Q Consensus 113 ~P~Gl~~d~-~G~lyVad~~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~--- 188 (337)
+-+.+..|+ +++++|+.....|++||. +|++...........+. +..
T Consensus 356 HiNsv~~d~~dd~~liSsR~~~I~~Id~-tG~V~W~LGg~~~w~~d----------------------------~~~~~l 406 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQGVVKIGR-DKQVKWILAPSKGWEKP----------------------------LASKLL 406 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEET-TSCEEEEESCSTTCCTT----------------------------GGGGBC
T ss_pred EecceeEcCCCCEEEEECCccEEEEEcC-CCcEEEEECCCCCCchh----------------------------hhhhcc
Q ss_pred --------------------CCCCCC---ccEEEcCCCcEEEEcCCCCc--cCceeeeeecCCccEEEEcCCCCeeEEEe
Q psy4771 189 --------------------AKPQIP---NSVTVDSDGMVYWSDSSTKY--KSGLFEGLTSGSGRLIQYNPKTKKNKVLI 243 (337)
Q Consensus 189 --------------------~~~~~p---n~v~vd~~G~lyvtd~~~~~--~~~~~~~~~~~~G~v~~~d~~~~~~~~~~ 243 (337)
..+.+. ++..+-++|+|.+-|.+... ............+..+++|+++++++.+.
T Consensus 407 ~Pvd~~G~~~~~~~~~~~~~~~F~~~~gQH~a~~~~~g~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw 486 (571)
T 3elq_A 407 KPVDANGKPITCNENGLCENSDFDFTYTQHTAWISSKGTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVW 486 (571)
T ss_dssp EEBCTTSCBCCBCTTSCBSSSSCCCCSSCEEEEECTTSCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEE
T ss_pred ccccccCcccccccccccccCCCccccCCcCeEEcCCCeEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEE
Q ss_pred cc-------cccee--eEEEccCCCEEEEEeCC-----------CCEEEEEEeeCCC
Q psy4771 244 AN-------LHFAN--GVELSADESFVIVAETM-----------SSRVHRYYLKGPK 280 (337)
Q Consensus 244 ~~-------~~~p~--gia~~~dg~~lyva~~~-----------~~~I~~~~~~g~~ 280 (337)
.- +..|. .+..-++|+ .++.... ..+|..|+.++..
T Consensus 487 ~y~~~~g~~~yS~~~gs~Q~L~nGN-~li~~g~~~~~~~~g~~~~~~i~E~~~~~~e 542 (571)
T 3elq_A 487 EYGKERGYDFYSPITSIIEYQADRN-TMFGFGGSIHLFDVGQPTVGKLNEIDYKTKE 542 (571)
T ss_dssp EECGGGGGGGCCSSCCEEEEETTTT-EEEEEEEEETTTSTTSEEEEEEEEEETTTCC
T ss_pred EecCCCCCCcccccccccEECCCCC-EEEEecccccccccCCCCceeEEEECCCCCE
No 353
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=20.79 E-value=6.1e+02 Score=24.93 Aligned_cols=179 Identities=12% Similarity=0.106 Sum_probs=0.0
Q ss_pred EEEe---eCCeEEEEecCcEEEEEeC--CceeEEEe-c-----CccccCccccCccCCcceEEECC--CCcEEEEEC---
Q psy4771 67 AVVK---HKGDLYMGVDGGHILKLSG--GKLVPVVK-L-----GKDCYGFKYEQQCGRPLGIKFDK--NGALHVADA--- 130 (337)
Q Consensus 67 ~i~~---~~g~ly~d~~~g~I~~~~~--~~~~~~~~-~-----g~~~~~~~~~~~~~~P~Gl~~d~--~G~lyVad~--- 130 (337)
+|++ +.+.+|+....|.|+|-.. .+++.+.. . +.. .........|++|+ .+.+|++..
T Consensus 25 ~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~------~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 25 GLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGN------GANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSC------CCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred EEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCC------cccccceeEEEECCCCCCEEEEEecccc
Q ss_pred ----CCcEEEEEcCCCeEEEEeccccccCCCCCCCCCceeeCCCCCcccccceeeeccccCCCCCCCC---------ccE
Q psy4771 131 ----YFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGQTGQTEQLISMDTEIDGAKPQIP---------NSV 197 (337)
Q Consensus 131 ----~~gv~~vd~~~g~~~~l~~~~~~~~g~~~~~P~~v~~~~~g~~~~~~~v~~~~~~~~~~~~~~p---------n~v 197 (337)
..+|++=+-.+..-+.+.. +...+ ..+
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~----------------------------------------~~~~~~~~~g~~~~~~l 138 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRS----------------------------------------PVPMGANDMGRNGGERL 138 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEEC----------------------------------------SSCCCTTSTTTTSBCCE
T ss_pred cCCCCceEEEECCCCCCceeccC----------------------------------------CcccCccccCccccceE
Q ss_pred EEcCC--CcEEEEcCCCCccCceeeeeecCCccEEEEcCCCCeeEEEeccccc-------eeeEEEcc-CCCEEEEEeCC
Q psy4771 198 TVDSD--GMVYWSDSSTKYKSGLFEGLTSGSGRLIQYNPKTKKNKVLIANLHF-------ANGVELSA-DESFVIVAETM 267 (337)
Q Consensus 198 ~vd~~--G~lyvtd~~~~~~~~~~~~~~~~~G~v~~~d~~~~~~~~~~~~~~~-------p~gia~~~-dg~~lyva~~~ 267 (337)
++++. +.+|+.... .-+....+.|+.=.....+.. ...|+++| +.+.+|++...
T Consensus 139 ~v~p~~~~~v~a~~~~----------------~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 202 (763)
T 3a0f_A 139 AVNPHWTDELWFGSRT----------------QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHA 202 (763)
T ss_dssp EECTTSTTCEEEECSS----------------SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESS
T ss_pred EECCCCCCEEEEEeCC----------------CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeC
Q ss_pred CCEEEEEEeeCCCCCceeeeecC--------------------CCCCCCceeECCCCCEEEE
Q psy4771 268 SSRVHRYYLKGPKQGKSEVFIDG--------------------LPGLPDNVKRDSKGNFLVS 309 (337)
Q Consensus 268 ~~~I~~~~~~g~~~~~~~~~~~~--------------------~~g~Pdgi~~d~dG~l~va 309 (337)
.+ ..|.-.+....-..+-... .+..+..++++++|.+|++
T Consensus 203 ~g--~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~ 262 (763)
T 3a0f_A 203 VG--GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYIT 262 (763)
T ss_dssp TT--CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEE
T ss_pred CC--eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEE
No 354
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=20.58 E-value=4e+02 Score=22.75 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=22.8
Q ss_pred ccEEEEcCCCCeeEEEeccccce---eeEEEccCCCEEEEEeC
Q psy4771 227 GRLIQYNPKTKKNKVLIANLHFA---NGVELSADESFVIVAET 266 (337)
Q Consensus 227 G~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyva~~ 266 (337)
..+++||+.+.+.+.+......+ ..++. .++ .|||.-.
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~-~iyv~GG 126 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNG-KAYVTGG 126 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETT-EEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEE-ECC-EEEEEeC
Confidence 47999999988876654322122 22333 345 6888764
Done!