BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4773
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803F5|APMAP_DANRE Adipocyte plasma membrane-associated protein OS=Danio rerio
GN=apmap PE=2 SV=1
Length = 415
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R ++ G +G + FI+ LPG PDN++R S G + V++ +L + P ++
Sbjct: 282 RVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLK 341
Query: 73 KFVARFLH---LLEKIPSEDVKHVVGHFESILFLQGTRYTLLV-ISSQGEIVDALHSVDG 128
K + + LL+ +P RY+L+V + S G V + H G
Sbjct: 342 KLIFKLFSQDTLLKFVP--------------------RYSLVVELQSDGTCVRSFHDPQG 381
Query: 129 SLKG-SSDVEEYNGAYYFGSPISKHLARVPLAK 160
+ SS+ EY+G Y GS S +L ++ L+K
Sbjct: 382 LVSAYSSEAHEYSGHLYLGSFRSPYLCKLDLSK 414
>sp|Q3T0E5|APMAP_BOVIN Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP
PE=2 SV=1
Length = 412
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R+Y+ G +G ++VF++ LPG PDN++ S G + VS+ +L + P ++
Sbjct: 282 RFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLK 341
Query: 73 KFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLV-ISSQGEIVDALHSVDGSLK 131
K + + E V V RY+L++ +S G + +LH +G +
Sbjct: 342 KVIFKLFS------QETVMKFV-----------PRYSLVLELSDSGTFLRSLHDPEGQVV 384
Query: 132 G-SSDVEEYNGAYYFGSPISKHLARVPL 158
S+ E++G Y GS + +L R+ L
Sbjct: 385 TYVSEAHEHSGHLYLGSFRAPYLCRLRL 412
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTP--QLLHIIGPFPN 70
RYY+ G +G +++F++ +PGLPDN++ S G + V++ PV P +L + P
Sbjct: 282 RYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAM--PVVRPNPGFSMLDFLSEKPW 339
Query: 71 IRKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDG-S 129
I++ + + L E++ L R ++ +S G + H G +
Sbjct: 340 IKRMIFKLLSQ----------------ETVTKLLPKRSLVVELSETGSYRRSFHDPTGLT 383
Query: 130 LKGSSDVEEYNGAYYFGSPISKHLARVPL 158
+ S+ E+NG Y GS S + R+ L
Sbjct: 384 VPYVSEAHEHNGYLYLGSFRSPFICRLNL 412
>sp|B5X3B2|APMAP_SALSA Adipocyte plasma membrane-associated protein OS=Salmo salar
GN=apmap PE=2 SV=1
Length = 416
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R ++ G +G + F+D LPG PDN++R S G + V++ +L + P I+
Sbjct: 283 RVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIK 342
Query: 73 KFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLV-ISSQGEIVDALHSVDGSLK 131
K L+ K+ S+DV L RY+L++ + G + + H G +
Sbjct: 343 K-------LIFKLFSQDV----------LMKFVPRYSLVIELQESGACMRSFHDPHGMVA 385
Query: 132 G-SSDVEEYNGAYYFGSPISKHLARVPLAK 160
S+ E++G Y GS S +L ++ L+K
Sbjct: 386 AYVSEAHEHDGHLYLGSFRSPYLCKLDLSK 415
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens
GN=APMAP PE=1 SV=2
Length = 416
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R Y+ G +G +++F++ +PG PDN++ S G + V + +L + P I+
Sbjct: 283 RVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIK 342
Query: 73 KFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTL-LVISSQGEIVDALHSVDGSLK 131
+ + + E V V RY+L L +S G +LH DG +
Sbjct: 343 RMIFKLFS------QETVMKFV-----------PRYSLVLELSDSGAFRRSLHDPDGLVA 385
Query: 132 G-SSDVEEYNGAYYFGSPISKHLARVPL 158
S+V E++G Y GS S L R+ L
Sbjct: 386 TYISEVHEHDGHLYLGSFRSPFLCRLSL 413
>sp|Q7TP48|APMAP_RAT Adipocyte plasma membrane-associated protein OS=Rattus norvegicus
GN=Apmap PE=2 SV=2
Length = 376
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R Y+ G +G +++F++ +PG PDN++ S G + V+ +L + P I+
Sbjct: 243 RVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIK 302
Query: 73 KFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLV-ISSQGEIVDALHSVDGSLK 131
+ + + E V V RY+L++ +S G +LH DG +
Sbjct: 303 RMIFKLFS------QETVMKFV-----------PRYSLVLEVSDSGAFRRSLHDPDGQVV 345
Query: 132 G-SSDVEEYNGAYYFGSPISKHLARVPL 158
S+ E++G Y GS S + R+ L
Sbjct: 346 TYVSEAHEHDGYLYLGSFRSPFICRLSL 373
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus
GN=Apmap PE=1 SV=1
Length = 415
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIR 72
R Y+ G +G +++F++ +PG PDN++ S G + V+ +L + P I+
Sbjct: 282 RVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIK 341
Query: 73 KFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLV-ISSQGEIVDALHSVDGSLK 131
+ + + E V V RY+L++ +S G +LH DG +
Sbjct: 342 RMIFKMFS------QETVMKFV-----------PRYSLVLEVSDSGAFRRSLHDPDGQVV 384
Query: 132 G-SSDVEEYNGAYYFGSPISKHLARVPL 158
S+ E++G Y GS S + R+ L
Sbjct: 385 TYVSEAHEHDGYLYLGSFRSPFICRLSL 412
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2
Length = 335
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKR-DSKGNFLVSLV 51
RY++KGPK G SE F + + PDN+KR S GNF V+ V
Sbjct: 228 RYWIKGPKAGSSEDFTNSVSN-PDNIKRIGSTGNFWVASV 266
>sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1
Length = 344
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVS 49
+Y+L+GPK+G +EV + +P P N+KR++ G+F VS
Sbjct: 233 KYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVS 267
>sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3
SV=1
Length = 342
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVS 49
+Y+L+GPK+G +EV + +P P N+KR++ G+F VS
Sbjct: 231 KYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVS 265
>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2
Length = 352
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVS 49
+Y+L+GPK+G +E F+ +P P N+KR+S G+F VS
Sbjct: 239 KYWLEGPKKGSAE-FLVTIPN-PGNIKRNSDGHFWVS 273
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2
Length = 329
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 13 RYYLKGPKQGKSEVFIDGLPGLPDNVKR-DSKGNFLVSLV 51
RY++KG K G SE F + + PDN+KR S GNF V+ V
Sbjct: 230 RYWIKGSKAGTSEDFTNSVSN-PDNIKRIGSTGNFWVASV 268
>sp|Q99WG6|Y436_STAAM Uncharacterized lipoprotein SAV0436 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=lpl1 PE=3 SV=2
Length = 257
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 34 LPD--NVKRDSKGNFLVSLVCPVDEYTPQLLH---IIGPFPNI---RKFVARFLHLLEKI 85
LPD N K + K N ++ L D+ Q + G + N+ RK+ + + E +
Sbjct: 122 LPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKYNNGDVSINENV 181
Query: 86 PSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSS 134
PS DV++ + + + I+ +RY IS++ + +H +DG LKGSS
Sbjct: 182 PSYDVEYKMSNKDEIVKELRSRYN---ISTEKSPILKMH-IDGDLKGSS 226
>sp|Q7A7G6|Y396_STAAN Uncharacterized lipoprotein SA0396 OS=Staphylococcus aureus (strain
N315) GN=lpl1 PE=3 SV=2
Length = 257
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 34 LPD--NVKRDSKGNFLVSLVCPVDEYTPQLLH---IIGPFPNI---RKFVARFLHLLEKI 85
LPD N K + K N ++ L D+ Q + G + N+ RK+ + + E +
Sbjct: 122 LPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKYNNGDVSINENV 181
Query: 86 PSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSS 134
PS DV++ + + + I+ +RY IS++ + +H +DG LKGSS
Sbjct: 182 PSYDVEYKMSNKDEIVKELRSRYN---ISTEKSPILKMH-IDGDLKGSS 226
>sp|Q2FJK4|Y410_STAA3 Uncharacterized lipoprotein SAUSA300_0410 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0410 PE=3 SV=2
Length = 257
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 34 LPD--NVKRDSKGNFLVSLVCPVDEYTPQLLH---IIGPFPNI---RKFVARFLHLLEKI 85
LPD N K + K N ++ L D+ Q + G + N+ RK+ + + E +
Sbjct: 122 LPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKYNNGDVSINENV 181
Query: 86 PSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSS 134
PS DV++ + + + I+ +RY IS++ + +H +DG LKGSS
Sbjct: 182 PSYDVEYKMSNKDEIVKELRSRYN---ISTEKSPILKMH-IDGDLKGSS 226
>sp|A3DMS9|KAE1_STAMF Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1
homolog OS=Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1) GN=Smar_0838 PE=3 SV=1
Length = 338
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 65 IGPFPNIRKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALH 124
+GP + +ARFL IP V H V H E FL G + L++ S G + A+
Sbjct: 83 LGPCLRVGASLARFLSSYYNIPLIPVNHAVAHIEIGKFLFGFKDPLIIYVSGGNTLIAIQ 142
>sp|Q7UVL4|ARGC_RHOBA N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodopirellula
baltica (strain SH1) GN=argC PE=3 SV=1
Length = 346
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 65 IGPFPNIRKFVARFLHLLEKIPSED-VKHVVGHFESILFLQGTRYTLLVISSQGEIVDAL 123
+G ++ V + LL S+ HVV H + ++ GT + + + G+ +
Sbjct: 255 VGKAGSVEDAVRAMMSLLRDTYSDQPCVHVVDHLPATKYVAGTNHVQISVRPSGKRAVIV 314
Query: 124 HSVDGSLKGSSDVEEYNGAYYFGSPISKHL 153
++D KG+S N FG P + L
Sbjct: 315 CAIDNLTKGASGAAVQNMNVMFGLPETAGL 344
>sp|Q5W0Q7|USPL1_HUMAN SUMO-specific isopeptidase USPL1 OS=Homo sapiens GN=USPL1 PE=1 SV=1
Length = 1092
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 47 LVSLVCPVDEYTPQLLHIIGPFPN------IRKFVAR------FLHLLEKIPSEDVKHVV 94
LV+ + E+ P GP N IRK V LH +E +P D++H
Sbjct: 376 LVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYA 435
Query: 95 GHFESILF 102
HFE L+
Sbjct: 436 FHFEGCLY 443
>sp|O13287|6PGD_CANAX 6-phosphogluconate dehydrogenase, decarboxylating OS=Candida
albicans GN=DOR14 PE=3 SV=1
Length = 517
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 15 YLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLL 62
+L+ +GKS + + L D +KR + LV PVDE+ QLL
Sbjct: 67 FLENEAKGKSILGAHSIKELVDQLKRPRRIMLLVKAGAPVDEFINQLL 114
>sp|Q7YXU4|CPNA_DICDI Copine-A OS=Dictyostelium discoideum GN=cpnA PE=2 SV=1
Length = 600
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 107 RYTLLVISSQGEIVDALHSVDGSLKGS 133
+YT+L+I + GEI+DA +++D +K S
Sbjct: 413 KYTILMIITDGEILDADNTIDAIVKSS 439
>sp|O51219|MURE_BORBU UDP-N-acetylmuramyl-tripeptide synthetase OS=Borrelia burgdorferi
(strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
GN=murE PE=3 SV=1
Length = 508
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 43 KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEKIPSEDVKHVVG 95
KG+ +V VD Y+P + +I NIRKF++ F ++ PS+ +K V+G
Sbjct: 64 KGSNVVVCSRDVDFYSPNVTYIKVDDFNIRKFMSNFSNIFYDEPSKKLK-VIG 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,019,231
Number of Sequences: 539616
Number of extensions: 2788018
Number of successful extensions: 6113
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6095
Number of HSP's gapped (non-prelim): 25
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)