Query psy4773
Match_columns 160
No_of_seqs 129 out of 569
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 17:20:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.6 4.5E-14 1.5E-18 114.2 12.8 111 3-159 201-312 (322)
2 3sre_A PON1, serum paraoxonase 99.5 1.4E-13 4.7E-18 116.1 13.0 112 3-158 237-355 (355)
3 3g4e_A Regucalcin; six bladed 98.5 3.5E-07 1.2E-11 72.8 8.8 91 3-150 165-263 (297)
4 2p4o_A Hypothetical protein; p 98.4 2.5E-06 8.7E-11 68.2 10.3 91 3-150 183-279 (306)
5 3dr2_A Exported gluconolactona 98.4 2.8E-06 9.4E-11 67.6 10.3 90 8-159 214-305 (305)
6 3e5z_A Putative gluconolactona 98.2 9.7E-06 3.3E-10 63.6 10.2 94 3-159 187-285 (296)
7 1pjx_A Dfpase, DIISOPROPYLFLUO 98.0 2.1E-05 7.3E-10 61.3 7.8 98 4-159 193-298 (314)
8 2ghs_A AGR_C_1268P; regucalcin 98.0 6.6E-05 2.3E-09 60.5 10.7 91 3-150 195-293 (326)
9 2dg1_A DRP35, lactonase; beta 97.3 0.0015 5.2E-08 51.4 9.4 99 4-158 199-314 (333)
10 2qe8_A Uncharacterized protein 97.3 0.00073 2.5E-08 54.6 7.5 91 3-149 211-310 (343)
11 4hw6_A Hypothetical protein, I 96.8 0.012 4E-07 49.9 10.8 104 3-160 289-433 (433)
12 1q7f_A NHL, brain tumor CG1071 96.6 0.031 1.1E-06 42.8 11.1 97 4-158 180-278 (286)
13 1rwi_B Serine/threonine-protei 96.5 0.0077 2.6E-07 45.6 7.1 96 4-159 166-263 (270)
14 3hrp_A Uncharacterized protein 96.4 0.04 1.4E-06 45.9 11.7 98 3-158 283-408 (409)
15 2z2n_A Virginiamycin B lyase; 96.3 0.04 1.4E-06 41.8 10.2 91 5-158 200-293 (299)
16 3dr2_A Exported gluconolactona 96.1 0.023 7.9E-07 44.6 8.4 45 3-52 61-105 (305)
17 2qc5_A Streptogramin B lactona 96.1 0.035 1.2E-06 42.1 9.0 94 4-159 204-299 (300)
18 3v64_C Agrin; beta propeller, 96.1 0.041 1.4E-06 44.9 9.9 96 3-157 175-272 (349)
19 2qc5_A Streptogramin B lactona 96.0 0.053 1.8E-06 41.1 9.7 93 4-158 162-258 (300)
20 1ijq_A LDL receptor, low-densi 96.0 0.063 2.2E-06 42.9 10.3 99 3-158 136-236 (316)
21 3v64_C Agrin; beta propeller, 95.9 0.086 2.9E-06 42.9 11.2 44 3-50 89-134 (349)
22 1npe_A Nidogen, entactin; glyc 95.9 0.12 4.1E-06 39.5 11.2 96 4-159 139-237 (267)
23 3g4e_A Regucalcin; six bladed 95.7 0.086 2.9E-06 41.2 10.0 43 3-50 29-71 (297)
24 1ijq_A LDL receptor, low-densi 95.7 0.079 2.7E-06 42.3 9.8 98 3-158 93-193 (316)
25 1npe_A Nidogen, entactin; glyc 95.7 0.076 2.6E-06 40.6 9.3 45 3-50 95-140 (267)
26 2z2n_A Virginiamycin B lyase; 95.6 0.092 3.2E-06 39.7 9.6 43 5-51 158-201 (299)
27 3v65_B Low-density lipoprotein 95.4 0.13 4.6E-06 42.3 10.5 44 3-50 132-177 (386)
28 3fvz_A Peptidyl-glycine alpha- 95.4 0.18 6.2E-06 39.9 10.9 102 3-158 106-225 (329)
29 3v65_B Low-density lipoprotein 95.4 0.1 3.4E-06 43.1 9.7 96 3-157 218-315 (386)
30 1rwi_B Serine/threonine-protei 95.4 0.098 3.4E-06 39.3 8.8 45 4-51 41-85 (270)
31 2dg1_A DRP35, lactonase; beta 95.4 0.13 4.3E-06 40.1 9.7 46 4-52 61-106 (333)
32 1q7f_A NHL, brain tumor CG1071 95.3 0.15 5.2E-06 38.8 9.8 40 8-50 99-138 (286)
33 2p9w_A MAL S 1 allergenic prot 95.3 0.34 1.2E-05 40.2 12.5 98 6-158 97-213 (334)
34 3m0c_C LDL receptor, low-densi 95.3 0.11 3.8E-06 47.5 10.3 98 3-157 530-629 (791)
35 3das_A Putative oxidoreductase 95.0 0.036 1.2E-06 46.1 5.9 51 3-53 101-160 (347)
36 3e5z_A Putative gluconolactona 95.0 0.074 2.5E-06 41.0 7.3 45 3-52 44-88 (296)
37 3p5b_L Low density lipoprotein 94.9 0.11 3.6E-06 43.3 8.5 48 3-50 128-177 (400)
38 3p5b_L Low density lipoprotein 94.8 0.21 7E-06 41.5 10.0 98 3-157 218-317 (400)
39 2p4o_A Hypothetical protein; p 94.8 0.3 1E-05 38.3 10.4 45 3-52 47-91 (306)
40 3m0c_C LDL receptor, low-densi 94.6 0.16 5.4E-06 46.5 9.4 48 3-50 440-489 (791)
41 3sov_A LRP-6, low-density lipo 94.5 0.16 5.5E-06 40.9 8.4 99 3-159 95-196 (318)
42 3kya_A Putative phosphatase; s 94.5 0.45 1.5E-05 41.4 11.6 31 129-159 442-474 (496)
43 3hxj_A Pyrrolo-quinoline quino 94.5 0.18 6E-06 39.0 8.3 43 105-150 272-315 (330)
44 3tc9_A Hypothetical hydrolase; 94.3 0.26 8.7E-06 41.4 9.4 51 109-159 363-429 (430)
45 1n7d_A LDL receptor, low-densi 94.1 0.21 7.1E-06 44.8 8.8 99 3-158 512-612 (699)
46 3sov_A LRP-6, low-density lipo 93.7 0.66 2.3E-05 37.3 10.5 97 3-158 138-236 (318)
47 3s94_A LRP-6, low-density lipo 93.5 0.7 2.4E-05 40.8 11.2 44 3-49 365-409 (619)
48 2ism_A Putative oxidoreductase 93.5 0.091 3.1E-06 42.9 5.0 44 9-52 105-154 (352)
49 2g8s_A Glucose/sorbosone dehyd 93.5 0.16 5.5E-06 41.4 6.5 46 8-53 97-150 (353)
50 1pjx_A Dfpase, DIISOPROPYLFLUO 93.2 0.2 6.8E-06 38.4 6.3 44 5-51 42-90 (314)
51 3s94_A LRP-6, low-density lipo 93.1 0.59 2E-05 41.3 10.0 97 3-158 451-549 (619)
52 2ism_A Putative oxidoreductase 92.7 0.92 3.2E-05 36.8 10.0 48 5-53 165-223 (352)
53 4a0p_A LRP6, LRP-6, low-densit 92.6 0.98 3.3E-05 40.0 10.7 43 3-49 53-97 (628)
54 2fp8_A Strictosidine synthase; 92.6 0.88 3E-05 35.6 9.5 108 9-159 101-215 (322)
55 3dsm_A Uncharacterized protein 92.6 2.6 8.8E-05 33.2 12.4 98 8-158 151-251 (328)
56 1cru_A Protein (soluble quinop 91.9 0.21 7E-06 42.6 5.3 46 8-53 113-164 (454)
57 3fvz_A Peptidyl-glycine alpha- 91.9 0.61 2.1E-05 36.8 7.7 50 109-158 269-320 (329)
58 4a0p_A LRP6, LRP-6, low-densit 91.7 0.96 3.3E-05 40.0 9.5 97 3-158 448-547 (628)
59 4hw6_A Hypothetical protein, I 91.6 0.33 1.1E-05 40.8 6.2 45 3-52 157-201 (433)
60 2iwa_A Glutamine cyclotransfer 91.1 2 6.8E-05 34.2 10.0 50 108-159 44-94 (266)
61 3no2_A Uncharacterized protein 91.1 1.3 4.5E-05 34.4 8.9 42 108-149 186-232 (276)
62 4a2l_A BT_4663, two-component 91.0 0.69 2.4E-05 41.2 8.0 36 11-50 564-603 (795)
63 3tc9_A Hypothetical hydrolase; 91.0 1.1 3.9E-05 37.4 8.9 44 4-52 155-199 (430)
64 3a9g_A Putative uncharacterize 90.7 0.32 1.1E-05 39.7 5.2 44 9-52 105-154 (354)
65 1n7d_A LDL receptor, low-densi 90.5 0.24 8.1E-06 44.4 4.4 46 3-49 422-470 (699)
66 2ghs_A AGR_C_1268P; regucalcin 90.5 0.79 2.7E-05 36.2 7.1 43 3-50 65-107 (326)
67 2g8s_A Glucose/sorbosone dehyd 90.2 0.2 6.9E-06 40.9 3.4 48 3-50 293-340 (353)
68 3no2_A Uncharacterized protein 90.0 1.6 5.3E-05 34.0 8.4 48 108-158 146-193 (276)
69 3hxj_A Pyrrolo-quinoline quino 89.1 1.9 6.5E-05 33.0 8.2 47 107-157 234-281 (330)
70 3v9f_A Two-component system se 89.1 1.6 5.6E-05 38.7 8.7 48 108-157 559-608 (781)
71 3a9g_A Putative uncharacterize 88.9 0.31 1E-05 39.9 3.6 50 3-52 281-331 (354)
72 3dsm_A Uncharacterized protein 88.8 6.9 0.00023 30.7 11.5 51 109-159 106-160 (328)
73 4a2l_A BT_4663, two-component 88.8 3.4 0.00012 36.7 10.7 46 110-157 564-611 (795)
74 3das_A Putative oxidoreductase 88.5 0.29 9.8E-06 40.6 3.2 50 4-53 278-328 (347)
75 3ott_A Two-component system se 86.6 2.2 7.5E-05 37.7 8.0 18 34-51 518-535 (758)
76 3qqz_A Putative uncharacterize 86.3 5.4 0.00019 31.3 9.4 47 108-156 49-96 (255)
77 3v9f_A Two-component system se 86.3 3.7 0.00013 36.4 9.3 39 110-148 517-557 (781)
78 3hrp_A Uncharacterized protein 86.2 9.9 0.00034 31.1 11.4 40 8-50 239-285 (409)
79 1cru_A Protein (soluble quinop 84.0 2.8 9.7E-05 35.4 7.2 28 22-50 17-44 (454)
80 3vgz_A Uncharacterized protein 82.8 14 0.00046 28.1 13.5 48 111-158 209-260 (353)
81 3nok_A Glutaminyl cyclase; bet 81.4 18 0.00061 28.9 10.5 52 108-159 155-209 (268)
82 3vgz_A Uncharacterized protein 80.6 16 0.00056 27.6 11.7 39 8-50 68-107 (353)
83 2qe8_A Uncharacterized protein 80.0 12 0.00042 29.3 9.2 51 108-158 93-152 (343)
84 3nol_A Glutamine cyclotransfer 77.9 24 0.00082 27.9 10.8 52 108-159 146-200 (262)
85 3c75_H MADH, methylamine dehyd 76.9 21 0.00073 29.9 10.2 101 9-159 99-208 (426)
86 2p9w_A MAL S 1 allergenic prot 76.1 7.3 0.00025 32.1 6.9 19 33-51 13-32 (334)
87 3ott_A Two-component system se 75.0 25 0.00085 30.8 10.5 39 10-51 122-164 (758)
88 4a9v_A PHOX; hydrolase, beta-p 74.0 14 0.00046 33.0 8.4 37 108-146 509-548 (592)
89 3u4y_A Uncharacterized protein 73.4 27 0.00091 26.3 11.4 43 6-49 195-238 (331)
90 1jmx_B Amine dehydrogenase; ox 73.1 18 0.00062 27.2 8.2 42 5-50 17-61 (349)
91 3mbr_X Glutamine cyclotransfer 72.1 33 0.0011 26.7 11.1 50 110-159 126-178 (243)
92 3zwu_A Alkaline phosphatase PH 71.7 3.8 0.00013 36.4 4.4 19 34-52 477-495 (592)
93 2iwa_A Glutamine cyclotransfer 70.4 37 0.0013 26.6 10.2 47 108-158 86-133 (266)
94 3qqz_A Putative uncharacterize 69.3 7.7 0.00026 30.4 5.3 57 100-157 187-250 (255)
95 3nol_A Glutamine cyclotransfer 64.5 43 0.0015 26.4 8.8 50 108-159 65-115 (262)
96 3mbr_X Glutamine cyclotransfer 62.3 41 0.0014 26.1 8.3 50 108-159 43-93 (243)
97 1pby_B Quinohemoprotein amine 61.7 46 0.0016 24.6 9.6 43 4-50 6-52 (337)
98 3it8_D 2L protein; MHC class I 53.0 8.9 0.0003 31.6 2.9 23 31-53 247-272 (324)
99 3nok_A Glutaminyl cyclase; bet 50.1 27 0.00091 27.8 5.3 57 100-159 67-124 (268)
100 3scy_A Hypothetical bacterial 48.4 89 0.003 23.8 10.9 37 7-47 231-273 (361)
101 3q6k_A 43.2 kDa salivary prote 47.4 17 0.00057 30.4 3.9 50 3-52 291-343 (381)
102 3f62_A Interleukin 18 binding 46.7 10 0.00036 26.2 2.1 27 12-41 34-61 (109)
103 3kya_A Putative phosphatase; s 43.7 55 0.0019 28.2 6.7 49 3-52 263-330 (496)
104 3sre_A PON1, serum paraoxonase 42.7 1.4E+02 0.0046 24.3 9.7 41 108-148 141-183 (355)
105 3hfq_A Uncharacterized protein 42.3 1.1E+02 0.0037 23.1 12.5 45 5-50 205-258 (347)
106 2oiz_A Aromatic amine dehydrog 40.4 1.3E+02 0.0045 23.5 9.2 52 108-159 81-139 (361)
107 3sjl_D Methylamine dehydrogena 35.6 1.8E+02 0.0063 23.9 10.8 52 108-159 109-168 (386)
108 1l0q_A Surface layer protein; 31.9 1.7E+02 0.0057 22.3 11.4 39 6-48 9-47 (391)
109 3s25_A Hypothetical 7-bladed b 30.6 1.9E+02 0.0065 22.5 8.2 85 9-159 207-292 (302)
110 3q7m_A Lipoprotein YFGL, BAMB; 29.8 1.6E+02 0.0054 22.7 6.9 44 106-151 326-370 (376)
111 3q7m_A Lipoprotein YFGL, BAMB; 29.5 1.8E+02 0.0062 22.3 7.2 50 107-157 62-119 (376)
112 1jmx_B Amine dehydrogenase; ox 28.2 1.8E+02 0.0061 21.4 7.7 47 110-158 23-72 (349)
113 3bws_A Protein LP49; two-domai 26.6 2.2E+02 0.0075 21.9 10.4 93 6-160 280-390 (433)
114 1s29_A LA protein; winged heli 26.3 8.3 0.00028 25.8 -1.1 14 109-122 74-87 (92)
115 1mda_H Methylamine dehydrogena 25.8 2.6E+02 0.0089 22.5 8.5 20 31-51 64-84 (368)
116 1qks_A Cytochrome CD1 nitrite 24.9 3.2E+02 0.011 23.3 11.2 41 5-49 173-214 (567)
117 2wg3_C Hedgehog-interacting pr 24.5 61 0.0021 27.3 3.7 44 9-52 303-355 (463)
118 2nnc_A Sulfur covalently-bindi 24.2 1.8E+02 0.0061 20.2 5.5 41 108-148 73-113 (124)
119 3scy_A Hypothetical bacterial 23.8 2.4E+02 0.0081 21.3 14.0 45 7-52 25-69 (361)
120 3u4y_A Uncharacterized protein 23.3 2.3E+02 0.0077 20.9 12.2 37 10-50 109-146 (331)
121 1pby_B Quinohemoprotein amine 22.7 2.3E+02 0.0077 20.7 10.6 41 6-50 53-100 (337)
122 1jof_A Carboxy-CIS,CIS-muconat 22.7 2.6E+02 0.0089 21.4 10.3 39 10-50 61-101 (365)
123 1ydu_A AT5G01610; DUF538, stru 22.1 39 0.0013 25.2 1.8 30 24-53 55-91 (170)
124 1l0q_A Surface layer protein; 20.5 2.8E+02 0.0096 20.9 12.1 39 116-158 233-273 (391)
125 2i46_A Adrenocortical dysplasi 20.2 62 0.0021 23.4 2.4 11 68-78 7-17 (161)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.55 E-value=4.5e-14 Score=114.15 Aligned_cols=111 Identities=23% Similarity=0.422 Sum_probs=94.5
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhh
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLL 82 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~ 82 (160)
++|+..+||.+|+++|.+.|+.++|.+ +|| ||||..|++|++|||....+. . + | .
T Consensus 201 v~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~---~-~-------~----------~-- 255 (322)
T 2fp8_A 201 VAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELD---G-N-------M----------H-- 255 (322)
T ss_dssp EEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETT---S-S-------T----------T--
T ss_pred EEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccc---c-c-------c----------c--
Confidence 478889999999999988899999997 999 999999999999999987532 1 1 1 0
Q ss_pred ccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCC-CcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 83 EKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGS-LKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~-~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
.+..+.|.++|++|++++.++++++. +..++.+.+.+|+||+++..++.|.+++++
T Consensus 256 ---------------------~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 256 ---------------------GRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ---------------------SCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred ---------------------CCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 12247899999999999999998864 788999999999999999999999999975
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.51 E-value=1.4e-13 Score=116.13 Aligned_cols=112 Identities=18% Similarity=0.203 Sum_probs=84.4
Q ss_pred cccCCCcEEEEEEecCC-CCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCNFSFWRYYLKGP-KQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~-k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++||..++|++|++++. +.+..++| + +||+|||++.|+ +|++|||.... ....+.-.|.
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~~~~-------g~~v~~~~P~---------- 297 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGCHPN-------GMRIFFYDAE---------- 297 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEEESC-------HHHHHSCCTT----------
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEecCC-------ceEEEEECCC----------
Confidence 58999999999999854 34556777 4 899999999999 59999977532 0111100111
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEe----CCCeEEEEEEcCCC-CCcCceEEEEECCEEEEecCCCCeEEE
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVIS----SQGEIVDALHSVDG-SLKGSSDVEEYNGAYYFGSPISKHLAR 155 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd----~~G~il~~l~d~~g-~~~~iS~v~e~~g~LylGS~~~~~i~~ 155 (160)
.+....|+|+. +++++.+.|+| +| .++.+|.|.+++|+||+||+..+ +..
T Consensus 298 -----------------------~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~ 352 (355)
T 3sre_A 298 -----------------------NPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALY 352 (355)
T ss_dssp -----------------------SCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEE
T ss_pred -----------------------CCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-cee
Confidence 12246788887 68999999999 55 57999999999999999999999 556
Q ss_pred EeC
Q psy4773 156 VPL 158 (160)
Q Consensus 156 ~~l 158 (160)
|+|
T Consensus 353 c~~ 355 (355)
T 3sre_A 353 CDL 355 (355)
T ss_dssp EEC
T ss_pred ccC
Confidence 654
No 3
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.52 E-value=3.5e-07 Score=72.75 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=69.8
Q ss_pred cccCCCcEEEEEEecCC--CCCcceEecc--cCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHh
Q psy4773 3 QTDYCNFSFWRYYLKGP--KQGKSEVFID--GLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARF 78 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~--k~G~~evfid--~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l 78 (160)
+++|...+|.+|.++.. +....++|++ ..+|.||++..|++|++|||....
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~------------------------- 219 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG------------------------- 219 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-------------------------
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-------------------------
Confidence 47888999999998521 2233467775 234799999999999999998653
Q ss_pred hhhhccCCccccceeccceeeeeeecCCeEEEEEEeCC-CeEEEEEEcCCCCCcCceEEEEEC---CEEEEecCCC
Q psy4773 79 LHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQ-GEIVDALHSVDGSLKGSSDVEEYN---GAYYFGSPIS 150 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~-G~il~~l~d~~g~~~~iS~v~e~~---g~LylGS~~~ 150 (160)
+.|.++|++ |+++..+..+. ..+|++...+ ++||+++-..
T Consensus 220 -----------------------------~~v~~~d~~tG~~~~~i~~p~---~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 -----------------------------GRVIRLDPVTGKRLQTVKLPV---DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------------------------TEEEEECTTTCCEEEEEECSS---SBEEEEEEESGGGCEEEEEEBCT
T ss_pred -----------------------------CEEEEEcCCCceEEEEEECCC---CCceEEEEeCCCCCEEEEEcCCc
Confidence 236789986 99999998775 4688888874 6999998653
No 4
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.37 E-value=2.5e-06 Score=68.22 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=67.3
Q ss_pred cccCCCcEEEEEEecC-CCCCcceEecccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhh
Q psy4773 3 QTDYCNFSFWRYYLKG-PKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHL 81 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G-~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~ 81 (160)
++|+..+||.+|++++ .+.+..++|.+ + +.||+|..|++|++|||....
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~~---------------------------- 232 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHIY---------------------------- 232 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBTT----------------------------
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCCC----------------------------
Confidence 5789999999999986 34566788886 4 579999999999999998652
Q ss_pred hccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-----CCEEEEecCCC
Q psy4773 82 LEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-----NGAYYFGSPIS 150 (160)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-----~g~LylGS~~~ 150 (160)
..|.++|++|++.....-+. .+...+++... +++||+.+..+
T Consensus 233 --------------------------~~V~~~~~~G~~~~~~~~~~-~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 233 --------------------------NSVVRIAPDRSTTIIAQAEQ-GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp --------------------------CCEEEECTTCCEEEEECGGG-TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred --------------------------CeEEEECCCCCEEEEeeccc-ccCCceEEEEecccCCCCEEEEECCCC
Confidence 23567899998754322222 23567888875 37999988653
No 5
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.36 E-value=2.8e-06 Score=67.63 Aligned_cols=90 Identities=17% Similarity=0.181 Sum_probs=69.8
Q ss_pred CcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhccCCc
Q psy4773 8 NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEKIPS 87 (160)
Q Consensus 8 ~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~~~~~ 87 (160)
..+|.+|.+++...+..++|++..+|.||+|..|++|++|++...
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~----------------------------------- 258 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT----------------------------------- 258 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-----------------------------------
T ss_pred CCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-----------------------------------
Confidence 379999999865555567888766899999999999999997611
Q ss_pred cccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEE--ECCEEEEecCCCCeEEEEeCC
Q psy4773 88 EDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEE--YNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e--~~g~LylGS~~~~~i~~~~l~ 159 (160)
+ |.++|++|+.+..+..+. .++.+.. .+++||+++- ..|-+++++
T Consensus 259 --------------------g-v~~~~~~g~~~~~~~~~~----~~~~~~f~~d~~~L~it~~--~~l~~~~~~ 305 (305)
T 3dr2_A 259 --------------------G-VCVFDSDGQLLGHIPTPG----TASNCTFDQAQQRLFITGG--PCLWMLPLP 305 (305)
T ss_dssp --------------------E-EEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEEEET--TEEEEEECC
T ss_pred --------------------c-EEEECCCCCEEEEEECCC----ceeEEEEeCCCCEEEEEcC--CeEEEEECC
Confidence 2 677899999999998765 2566666 3578999986 467776653
No 6
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.21 E-value=9.7e-06 Score=63.55 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=71.3
Q ss_pred cccCCCcEEEEEEecCC-CC-CcceEecccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCNFSFWRYYLKGP-KQ-GKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~-k~-G~~evfid~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++++...+|.+|.+++. +. +..++| +..++.||+|..|++|++||+. .
T Consensus 187 v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~---------------------------- 236 (296)
T 3e5z_A 187 VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G---------------------------- 236 (296)
T ss_dssp EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T----------------------------
T ss_pred EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C----------------------------
Confidence 56888899999999732 22 334677 6567899999999999999988 2
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE---CCEEEEecCCCCeEEEEe
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY---NGAYYFGSPISKHLARVP 157 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~---~g~LylGS~~~~~i~~~~ 157 (160)
+.|.++|++|+.+..+..+.+ ++++... ++.||+++- ..+.+++
T Consensus 237 ---------------------------~~v~~~~~~g~~~~~~~~~~~----~~~~~f~~~d~~~L~v~t~--~~l~~~~ 283 (296)
T 3e5z_A 237 ---------------------------DGVHVLTPDGDELGRVLTPQT----TSNLCFGGPEGRTLYMTVS--TEFWSIE 283 (296)
T ss_dssp ---------------------------TEEEEECTTSCEEEEEECSSC----CCEEEEESTTSCEEEEEET--TEEEEEE
T ss_pred ---------------------------CeEEEECCCCCEEEEEECCCC----ceeEEEECCCCCEEEEEcC--CeEEEEE
Confidence 125678999999999987763 6777764 258999986 4677776
Q ss_pred CC
Q psy4773 158 LA 159 (160)
Q Consensus 158 l~ 159 (160)
+.
T Consensus 284 ~~ 285 (296)
T 3e5z_A 284 TN 285 (296)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 7
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.97 E-value=2.1e-05 Score=61.31 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=70.7
Q ss_pred ccCCCcEEEEEEecCC-CCCcceEecccCC----CCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHh
Q psy4773 4 TDYCNFSFWRYYLKGP-KQGKSEVFIDGLP----GLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARF 78 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~-k~G~~evfid~LP----G~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l 78 (160)
+++...+|.+|.+++. +....+++.. ++ +.|++|..|++|++||+....
T Consensus 193 ~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~i~~d~~G~l~v~~~~~------------------------- 246 (314)
T 1pjx_A 193 AETPTKKLWSYDIKGPAKIENKKVWGH-IPGTHEGGADGMDFDEDNNLLVANWGS------------------------- 246 (314)
T ss_dssp EETTTTEEEEEEEEETTEEEEEEEEEE-CCCCSSCEEEEEEEBTTCCEEEEEETT-------------------------
T ss_pred EECCCCeEEEEECCCCCccccceEEEE-CCCCCCCCCCceEECCCCCEEEEEcCC-------------------------
Confidence 5667789999998732 2223346665 66 779999999999999987542
Q ss_pred hhhhccCCccccceeccceeeeeeecCCeEEEEEEeCC-CeEEEEEEcCCCCCcCceEEEEE-CC-EEEEecCCCCeEEE
Q psy4773 79 LHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQ-GEIVDALHSVDGSLKGSSDVEEY-NG-AYYFGSPISKHLAR 155 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~-G~il~~l~d~~g~~~~iS~v~e~-~g-~LylGS~~~~~i~~ 155 (160)
+.|.++|.+ |+.+..+..+. ..++++... +| +||+++-....|.+
T Consensus 247 -----------------------------~~i~~~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 247 -----------------------------SHIEVFGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp -----------------------------TEEEEECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred -----------------------------CEEEEEcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEeCCCCeEEE
Confidence 235677877 88888887653 356777763 34 59999988888888
Q ss_pred EeCC
Q psy4773 156 VPLA 159 (160)
Q Consensus 156 ~~l~ 159 (160)
+++.
T Consensus 295 ~~~~ 298 (314)
T 1pjx_A 295 FEWQ 298 (314)
T ss_dssp EECS
T ss_pred EeCC
Confidence 8753
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.96 E-value=6.6e-05 Score=60.50 Aligned_cols=91 Identities=20% Similarity=0.141 Sum_probs=67.2
Q ss_pred cccCCCcEEEEEEec--CC-CCCcceEecc--cCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHH
Q psy4773 3 QTDYCNFSFWRYYLK--GP-KQGKSEVFID--GLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVAR 77 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~--G~-k~G~~evfid--~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~ 77 (160)
++++...+|.+|.++ +. +....++|.+ ..++.||++..|++|++||+....
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~------------------------ 250 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE------------------------ 250 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT------------------------
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC------------------------
Confidence 467778899999985 21 2233456654 235789999999999999987542
Q ss_pred hhhhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE---CCEEEEecCCC
Q psy4773 78 FLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY---NGAYYFGSPIS 150 (160)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~---~g~LylGS~~~ 150 (160)
+.|.++|++|+.+..+..+. ..++++... +++||+++...
T Consensus 251 ------------------------------~~v~~~d~~g~~~~~i~~~~---~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 251 ------------------------------GAVDRYDTDGNHIARYEVPG---KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ------------------------------TEEEEECTTCCEEEEEECSC---SBEEEEEEESTTSCEEEEEEBCT
T ss_pred ------------------------------CEEEEECCCCCEEEEEECCC---CCcEEEEEecCCCCEEEEEecCC
Confidence 23577899999999988664 357888876 26899998765
No 9
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.28 E-value=0.0015 Score=51.35 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=66.1
Q ss_pred ccCCCcEEEEEEecCCCCCcc-----eEecccCCC--CCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHH
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKS-----EVFIDGLPG--LPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVA 76 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~-----evfid~LPG--~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~ 76 (160)
+++...+|.+|.++... +.. +++.+ +++ .|++|..|++|++|++....
T Consensus 199 ~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~----------------------- 253 (333)
T 2dg1_A 199 TETTANRLHRIALEDDG-VTIQPFGATIPYY-FTGHEGPDSCCIDSDDNLYVAMYGQ----------------------- 253 (333)
T ss_dssp EEGGGTEEEEEEECTTS-SSEEEEEEEEEEE-CCSSSEEEEEEEBTTCCEEEEEETT-----------------------
T ss_pred EeCCCCeEEEEEecCCC-cCcccccceEEEe-cCCCCCCCceEECCCCCEEEEEcCC-----------------------
Confidence 45567789999985321 111 23333 554 89999999999999987542
Q ss_pred HhhhhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCC---CCCcCceEEEEE--CCEEEEecCCC-
Q psy4773 77 RFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVD---GSLKGSSDVEEY--NGAYYFGSPIS- 150 (160)
Q Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~---g~~~~iS~v~e~--~g~LylGS~~~- 150 (160)
+.|.++|.+|+.+..+..+. |.+..++++... +++||+++...
T Consensus 254 -------------------------------~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~ 302 (333)
T 2dg1_A 254 -------------------------------GRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIE 302 (333)
T ss_dssp -------------------------------TEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGG
T ss_pred -------------------------------CEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccC
Confidence 23566788999998887654 223356777764 35899998763
Q ss_pred ----CeEEEEeC
Q psy4773 151 ----KHLARVPL 158 (160)
Q Consensus 151 ----~~i~~~~l 158 (160)
..|-++++
T Consensus 303 ~~~~~~l~~~~~ 314 (333)
T 2dg1_A 303 MGGGSMLYTVNG 314 (333)
T ss_dssp GTCCEEEEEEEC
T ss_pred CCCCceEEEEec
Confidence 25555554
No 10
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.26 E-value=0.00073 Score=54.57 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=60.9
Q ss_pred cccCCCcEEEEEEec---CCCCCcceEecc----cCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHH
Q psy4773 3 QTDYCNFSFWRYYLK---GPKQGKSEVFID----GLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFV 75 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~---G~k~G~~evfid----~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i 75 (160)
++++...++.++... ....++.+++.. .-.|.||+|..|++|++|++....
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~---------------------- 268 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH---------------------- 268 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG----------------------
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCC----------------------
Confidence 456677788888753 222233333321 124689999999999999997552
Q ss_pred HHhhhhhccCCccccceeccceeeeeeecCCeEEEEEEeC-CCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCC
Q psy4773 76 ARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISS-QGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPI 149 (160)
Q Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~-~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~ 149 (160)
+.|.++|+ +|++.....++ .+...+++... +|+||+.+-.
T Consensus 269 --------------------------------~~V~~~d~~~G~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 269 --------------------------------SAIGVITSADRAYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp --------------------------------TEEEEEETTTTEEEEEEECG--GGSCEEEEEECTTSCEEEEECC
T ss_pred --------------------------------CeEEEEECCCCCEEEEEECC--ceecCCeeEECCCCcEEEEeCc
Confidence 34677888 89876666654 34567777774 6889988753
No 11
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.77 E-value=0.012 Score=49.89 Aligned_cols=104 Identities=12% Similarity=0.164 Sum_probs=71.4
Q ss_pred cccCCCcEEEEEEecCC--CCCcceEecc--cCCCC------------CCceee---------cCCCCeEEEeecCCCCc
Q psy4773 3 QTDYCNFSFWRYYLKGP--KQGKSEVFID--GLPGL------------PDNVKR---------DSKGNFLVSLVCPVDEY 57 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~--k~G~~evfid--~LPG~------------PDNI~~---------~~~G~fWval~~~r~~~ 57 (160)
++|+..+||+|+.+.+. +.++..+|+. +-+|+ |.+|.. |++|.+|||-...
T Consensus 289 vad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n---- 364 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS---- 364 (433)
T ss_dssp EEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT----
T ss_pred EEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC----
Confidence 57899999999998753 2234456664 23455 455888 8889999986432
Q ss_pred ChhhhhhcCCChHHHHHHHHhhhhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcC--------C--
Q psy4773 58 TPQLLHIIGPFPNIRKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSV--------D-- 127 (160)
Q Consensus 58 ~~~~~~~l~~~P~lRk~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~--------~-- 127 (160)
..|.++|++|++....... +
T Consensus 365 --------------------------------------------------~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~ 394 (433)
T 4hw6_A 365 --------------------------------------------------HTVRVLTPEGRVTTYAGRGNSREWGYVDGE 394 (433)
T ss_dssp --------------------------------------------------TEEEEECTTSEEEEEECCCTTCSSCCBCEE
T ss_pred --------------------------------------------------CEEEEECCCCCEEEEEeCCCCCccccCCCc
Confidence 2345678888666555321 1
Q ss_pred ----CCCcCceEEEEE--CCEEEEecCCCCeEEEEeCCC
Q psy4773 128 ----GSLKGSSDVEEY--NGAYYFGSPISKHLARVPLAK 160 (160)
Q Consensus 128 ----g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l~~ 160 (160)
..+...+.+... +|.||+.-..++-|-++.+.+
T Consensus 395 ~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 433 (433)
T 4hw6_A 395 LRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPEE 433 (433)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred cccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecCC
Confidence 135667788876 799999999999999987653
No 12
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.56 E-value=0.031 Score=42.80 Aligned_cols=97 Identities=19% Similarity=0.235 Sum_probs=63.8
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecc-cCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhh
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLL 82 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~ 82 (160)
+++...+|.+|..+|. ....|.. ..-..|..|..|++|.+||+-... +
T Consensus 180 ~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~----~------------------------ 228 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHN----N------------------------ 228 (286)
T ss_dssp EEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSS----S------------------------
T ss_pred EECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCC----C------------------------
Confidence 4566788999987653 2233332 111479999999999999987432 0
Q ss_pred ccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEeC
Q psy4773 83 EKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~l 158 (160)
..|..+|.+|+.+..+....+ ...+.++... +|+||+++. .+.|.+.++
T Consensus 229 -------------------------~~i~~~~~~g~~~~~~~~~~~-~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 229 -------------------------FNLTIFTQDGQLISALESKVK-HAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp -------------------------CEEEEECTTSCEEEEEEESSC-CSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred -------------------------EEEEEECCCCCEEEEEcccCC-CCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 135667889998888875432 2234555554 689999974 667776654
No 13
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.48 E-value=0.0077 Score=45.58 Aligned_cols=96 Identities=13% Similarity=0.083 Sum_probs=63.9
Q ss_pred ccCCCcEEEEEEecCCCCCcceEec-ccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhh
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFI-DGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLL 82 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfi-d~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~ 82 (160)
+++...+|.+|..++.+ ..... ..+ ..|.+|..|++|.+||+-...
T Consensus 166 ~~~~~~~i~~~~~~~~~---~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~----------------------------- 212 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNN---QVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT----------------------------- 212 (270)
T ss_dssp EEGGGTEEEEECTTTCC---EEECCCSSC-CSEEEEEECTTCCEEEEETTT-----------------------------
T ss_pred EECCCCEEEEEecCCCc---eEeecccCC-CCceEEEECCCCCEEEEECCC-----------------------------
Confidence 45556788888876532 22221 123 579999999999999987432
Q ss_pred ccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEeCC
Q psy4773 83 EKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~l~ 159 (160)
+.|.++|.+|+...... ...+..++++... +|.||++...++-|.+++++
T Consensus 213 -------------------------~~v~~~~~~~~~~~~~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 213 -------------------------NQVVKLLAGSTTSTVLP--FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp -------------------------SCEEEECTTCSCCEECC--CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred -------------------------CcEEEEcCCCCcceeec--cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 12456677776554432 2223557777765 58899999999999998875
No 14
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.41 E-value=0.04 Score=45.92 Aligned_cols=98 Identities=19% Similarity=0.283 Sum_probs=68.7
Q ss_pred cccCCCcEEEEEEecCCCCCcceEeccc--CC------------CCCCceeecCCCCeEEEee-cCCCCcChhhhhhcCC
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDG--LP------------GLPDNVKRDSKGNFLVSLV-CPVDEYTPQLLHIIGP 67 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~--LP------------G~PDNI~~~~~G~fWval~-~~r~~~~~~~~~~l~~ 67 (160)
++|+..++|+|+..+|. ..+++.. -+ ..|++|..|++|.+||+-. ..
T Consensus 283 v~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-------------- 344 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-------------- 344 (409)
T ss_dssp EEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT--------------
T ss_pred EEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC--------------
Confidence 47888999999987753 4455432 11 2489999999999999864 31
Q ss_pred ChHHHHHHHHhhhhhccCCccccceeccceeeeeeecCCeEEEEEEe-CCCeEEEEEEcCC-----------CCCcCceE
Q psy4773 68 FPNIRKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVIS-SQGEIVDALHSVD-----------GSLKGSSD 135 (160)
Q Consensus 68 ~P~lRk~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd-~~G~il~~l~d~~-----------g~~~~iS~ 135 (160)
..|.++| ++|++......+. ..+.....
T Consensus 345 ----------------------------------------~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~g 384 (409)
T 3hrp_A 345 ----------------------------------------YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYD 384 (409)
T ss_dssp ----------------------------------------CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEE
T ss_pred ----------------------------------------CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceE
Confidence 2356677 7787655443311 12566777
Q ss_pred EEEE-CCEEEEecCCCCeEEEEeC
Q psy4773 136 VEEY-NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 136 v~e~-~g~LylGS~~~~~i~~~~l 158 (160)
+... +|.||+.-..+.-|-++.+
T Consensus 385 iavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 385 ICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEcCCCCEEEEECCCCeEEEEEe
Confidence 7775 4999999999999998875
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.30 E-value=0.04 Score=41.79 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=59.2
Q ss_pred cCCCcEEEEEEecCCCCCcceEecccCC---CCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhh
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVFIDGLP---GLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHL 81 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evfid~LP---G~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~ 81 (160)
+....+|.+|..+ |+...+. +| ..|..|..|++|++|++-...
T Consensus 200 ~~~~~~i~~~~~~----g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~---------------------------- 245 (299)
T 2z2n_A 200 EIIGNKIGRITTS----GEITEFK--IPTPNARPHAITAGAGIDLWFTEWGA---------------------------- 245 (299)
T ss_dssp ETTTTEEEEECTT----CCEEEEE--CSSTTCCEEEEEECSTTCEEEEETTT----------------------------
T ss_pred ccCCceEEEECCC----CcEEEEE--CCCCCCCceeEEECCCCCEEEeccCC----------------------------
Confidence 3446678888663 3344332 34 578899999999999986332
Q ss_pred hccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 82 LEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
+.+.++|.+|++. .+..+.+ ...+.++.+.+|.||+++. .+.|.+++.
T Consensus 246 --------------------------~~i~~~d~~g~~~-~~~~~~~-~~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 246 --------------------------NKIGRLTSNNIIE-EYPIQIK-SAEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp --------------------------TEEEEEETTTEEE-EEECSSS-SCCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred --------------------------ceEEEECCCCceE-EEeCCCC-CCccceEEecCCCEEEEec-CCcEEEEEc
Confidence 2356678778643 4443332 2346666667799999976 678888764
No 16
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.14 E-value=0.023 Score=44.60 Aligned_cols=45 Identities=11% Similarity=0.161 Sum_probs=35.9
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
++++...+|.|+..+ |+.++|.. -.+.|..+..|++|++|++-..
T Consensus 61 ~~d~~~~~i~~~~~~----g~~~~~~~-~~~~~~gl~~d~dG~l~v~~~~ 105 (305)
T 3dr2_A 61 WSDLVGRRVLGWRED----GTVDVLLD-ATAFTNGNAVDAQQRLVHCEHG 105 (305)
T ss_dssp EEETTTTEEEEEETT----SCEEEEEE-SCSCEEEEEECTTSCEEEEETT
T ss_pred EEECCCCEEEEEeCC----CCEEEEeC-CCCccceeeECCCCCEEEEECC
Confidence 567888999999764 45677775 5678999999999999998644
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.11 E-value=0.035 Score=42.15 Aligned_cols=94 Identities=9% Similarity=0.090 Sum_probs=58.9
Q ss_pred ccCCCcEEEEEEecCCCCCcceEec-ccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhh
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFI-DGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLL 82 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfi-d~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~ 82 (160)
+++...+|.+|..+ |+...+. ..--..|..|..|++|++|++-...
T Consensus 204 ~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------------------------- 250 (300)
T 2qc5_A 204 VEIMGNKIGRITTT----GEISEYDIPTPNARPHAITAGKNSEIWFTEWGA----------------------------- 250 (300)
T ss_dssp EETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-----------------------------
T ss_pred EccCCCEEEEEcCC----CcEEEEECCCCCCCceEEEECCCCCEEEeccCC-----------------------------
Confidence 34456678888663 3333332 1111468889999999999986331
Q ss_pred ccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEeCC
Q psy4773 83 EKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~l~ 159 (160)
+.+.++|.+|++. .+..+.+ ...+.++.+. +|.||+++. + -|.+++..
T Consensus 251 -------------------------~~i~~~~~~g~~~-~~~~~~~-~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 251 -------------------------NQIGRITNDNTIQ-EYQLQTE-NAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -------------------------TEEEEECTTSCEE-EEECCST-TCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred -------------------------CeEEEECCCCcEE-EEECCcc-CCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 2356778888765 3433322 2346666665 689999998 5 78777643
No 18
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.10 E-value=0.041 Score=44.88 Aligned_cols=96 Identities=14% Similarity=0.085 Sum_probs=64.1
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|+.. .+|.|+.++|. ..++++..--..|.+|..|. +|.+|++=...
T Consensus 175 ~td~~~~~~I~r~~~dG~---~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~--------------------------- 224 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH--------------------------- 224 (349)
T ss_dssp EEECSSSCEEEEEETTSC---SCEESCCSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EeccCCCCEEEEEeCCCC---CcEEEEECCCCCcceEEEeCCCCEEEEEECCC---------------------------
Confidence 567777 99999999984 34566542234799999995 66777764321
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEe
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVP 157 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~ 157 (160)
..|.++|.+|.-.+.+-.. .+....++...+++||.....+..|.++.
T Consensus 225 ---------------------------~~I~~~~~dG~~~~~~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 225 ---------------------------HVIERANLDGSHRKAVISQ--GLPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp ---------------------------TEEEEEETTSCSCEEEECS--SCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------------------------CEEEEEeCCCCceEEEEeC--CCCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 2245667677654444321 13455566667889999998888888876
No 19
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.04 E-value=0.053 Score=41.10 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=56.9
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecccCC---CCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFIDGLP---GLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid~LP---G~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
+++...+|.+|..+ |+...+. +| ..|..|..|++|.+|++-...
T Consensus 162 ~~~~~~~i~~~~~~----g~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~--------------------------- 208 (300)
T 2qc5_A 162 TENQNNSIGRITNT----GKLEEYP--LPTNAAAPVGITSGNDGALWFVEIMG--------------------------- 208 (300)
T ss_dssp EETTTTEEEEECTT----CCEEEEE--CSSTTCCEEEEEECTTSSEEEEETTT---------------------------
T ss_pred EecCCCeEEEECCC----CcEEEee--CCCCCCCcceEEECCCCCEEEEccCC---------------------------
Confidence 34556778888663 3333332 33 368899999999999986432
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEeC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~l 158 (160)
+.+.++|.+|++... ..+. ....++++... +|+||+++...+.|.+++.
T Consensus 209 ---------------------------~~i~~~~~~g~~~~~-~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 209 ---------------------------NKIGRITTTGEISEY-DIPT-PNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ---------------------------TEEEEECTTCCEEEE-ECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ---------------------------CEEEEEcCCCcEEEE-ECCC-CCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 224556666665543 2222 22345566654 5778888877777777653
No 20
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.97 E-value=0.063 Score=42.91 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=64.1
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeecCC-CCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK-GNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~-G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|+.. .+|.|+.++|. ..++++..--..|.+|..|.+ |.+|++=...
T Consensus 136 ~~d~~~~~~I~~~~~dG~---~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~--------------------------- 185 (316)
T 1ijq_A 136 WTDWGTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------- 185 (316)
T ss_dssp EEECSSSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EEccCCCCeEEEEcCCCC---CeEEEEECCCCCceEEEEeccCCEEEEEECCC---------------------------
Confidence 356654 79999999874 245555422257999999964 5666653221
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
..|.++|.+|+-.+.+-...+.+....++...+++||.....+..|.++..
T Consensus 186 ---------------------------~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 186 ---------------------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ---------------------------TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---------------------------CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 224566777765555543333344556666678899998888888888764
No 21
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.94 E-value=0.086 Score=42.91 Aligned_cols=44 Identities=20% Similarity=0.211 Sum_probs=31.5
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecc-cCCCCCCceeecC-CCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDS-KGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~-~G~fWval 50 (160)
++|+...+|+|+.++|. ..+.++. ++ ..|.+|..|. +|.+|++-
T Consensus 89 ~~D~~~~~I~r~~~~g~---~~~~~~~~~~-~~p~glavd~~~g~ly~~d 134 (349)
T 3v64_C 89 WSDVTLDRILRANLNGS---NVEEVVSTGL-ESPGGLAVDWVHDKLYWTD 134 (349)
T ss_dssp EEETTTTEEEEEETTSC---SCEEEECSSC-SCCCEEEEETTTTEEEEEE
T ss_pred EEeccCCceEEEecCCC---CceEEEeCCC-CCccEEEEecCCCeEEEEc
Confidence 47888999999999874 3445443 34 4699999995 56666654
No 22
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.87 E-value=0.12 Score=39.52 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=61.5
Q ss_pred ccCC--CcEEEEEEecCCCCCcceEecccCCCCCCceeecCCC-CeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 4 TDYC--NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKG-NFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 4 ~Et~--~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G-~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++.. ..+|.++.++|.. .+++...--+.|.+|..|++| .+|++-...
T Consensus 139 ~~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~--------------------------- 188 (267)
T 1npe_A 139 TDWNRDNPKIETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAGT--------------------------- 188 (267)
T ss_dssp EECCSSSCEEEEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EECCCCCcEEEEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECCC---------------------------
Confidence 4544 5799999998742 345543222579999999864 577765331
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
..|.++|.+|.-...+-+ .. .....+...+++||+....++.|.+++..
T Consensus 189 ---------------------------~~I~~~~~~g~~~~~~~~-~~--~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 189 ---------------------------HRAECLNPAQPGRRKVLE-GL--QYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ---------------------------TEEEEEETTEEEEEEEEE-CC--CSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---------------------------CEEEEEecCCCceEEEec-CC--CCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 124556766655444432 11 23345556689999999999999888753
No 23
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.74 E-value=0.086 Score=41.15 Aligned_cols=43 Identities=9% Similarity=0.092 Sum_probs=34.1
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval 50 (160)
++++...+|+||..++ |+.+.+ . +|+.|-.|..+++|++|++.
T Consensus 29 ~~d~~~~~i~~~d~~~---~~~~~~-~-~~~~~~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 29 FVDIPAKKVCRWDSFT---KQVQRV-T-MDAPVSSVALRQSGGYVATI 71 (297)
T ss_dssp EEETTTTEEEEEETTT---CCEEEE-E-CSSCEEEEEEBTTSSEEEEE
T ss_pred EEECCCCEEEEEECCC---CcEEEE-e-CCCceEEEEECCCCCEEEEE
Confidence 4677889999998875 444443 3 78889999999999999986
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.70 E-value=0.079 Score=42.32 Aligned_cols=98 Identities=12% Similarity=0.043 Sum_probs=60.5
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCC-CCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhh
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK-GNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHL 81 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~-G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~ 81 (160)
++|+...+|.++.++|. ..++++..--..|.+|..|+. |.+|++-...
T Consensus 93 ~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~---------------------------- 141 (316)
T 1ijq_A 93 WTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------------------------- 141 (316)
T ss_dssp EEETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEETTTTEEEEEECSS----------------------------
T ss_pred EEECCCCEEEEEeCCCC---ceEEEEECCCCCcceEEeCCCCCEEEEEccCC----------------------------
Confidence 46788899999998873 345666522247999999975 4444433211
Q ss_pred hccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeC
Q psy4773 82 LEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l 158 (160)
.+.|.+++.+|+....+-.. .+.....+... +++||........|.++++
T Consensus 142 -------------------------~~~I~~~~~dG~~~~~~~~~--~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 142 -------------------------PAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp -------------------------SCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -------------------------CCeEEEEcCCCCCeEEEEEC--CCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 02345667777766655432 23344455544 5777777777777777665
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.67 E-value=0.076 Score=40.64 Aligned_cols=45 Identities=20% Similarity=0.118 Sum_probs=31.5
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval 50 (160)
+++....+|.++.++|.. .++++..--..|..|..|+ +|.+|++-
T Consensus 95 v~d~~~~~I~~~~~~g~~---~~~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 95 WTDSQLDRIEVAKMDGTQ---RRVLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp EEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EEECCCCEEEEEEcCCCC---EEEEEECCCCCccEEEEeeCCCEEEEEE
Confidence 467778899999998742 3455541124799999998 56777765
No 26
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.63 E-value=0.092 Score=39.69 Aligned_cols=43 Identities=14% Similarity=0.131 Sum_probs=27.2
Q ss_pred cCCCcEEEEEEecCCCCCcceEe-cccCCCCCCceeecCCCCeEEEee
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVF-IDGLPGLPDNVKRDSKGNFLVSLV 51 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evf-id~LPG~PDNI~~~~~G~fWval~ 51 (160)
++...+|.+|..+ |+.+.+ ...-...|..|..|++|.+|++-.
T Consensus 158 ~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 158 ENQNNAIGRITES----GDITEFKIPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp ETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred eCCCCEEEEEcCC----CcEEEeeCCCCCCcceeEEECCCCCEEEEcc
Confidence 4445677777652 444443 211123588899999999999863
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.42 E-value=0.13 Score=42.32 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=31.3
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecc-cCCCCCCceeecC-CCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDS-KGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~-~G~fWval 50 (160)
++|+...+|+|+.++|. ..+.++. ++. .|.+|..|. +|.+|++-
T Consensus 132 ~~D~~~~~I~r~~~~g~---~~~~~~~~~~~-~p~glavd~~~g~lY~~d 177 (386)
T 3v65_B 132 WSDVTLDRILRANLNGS---NVEEVVSTGLE-SPGGLAVDWVHDKLYWTD 177 (386)
T ss_dssp EEETTTTEEEEEETTSC---CEEEEECSSCS-CCCCEEEETTTTEEEEEE
T ss_pred EEeCCCCcEEEEecCCC---CcEEEEeCCCC-CccEEEEEeCCCeEEEEc
Confidence 47888999999999874 3445443 343 699999995 56666654
No 28
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.40 E-value=0.18 Score=39.85 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=67.4
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecc--------cCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHH
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFID--------GLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRK 73 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid--------~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk 73 (160)
.+++...+|.+|..+|.. .....+.. .--..|..|..|+ +|.+||+-...
T Consensus 106 v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-------------------- 164 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-------------------- 164 (329)
T ss_dssp EEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS--------------------
T ss_pred EEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC--------------------
Confidence 467888999999887641 12233321 1112688999998 89999986311
Q ss_pred HHHHhhhhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCC-------CCCcCceEEEEE-C-CEEE
Q psy4773 74 FVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVD-------GSLKGSSDVEEY-N-GAYY 144 (160)
Q Consensus 74 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~-------g~~~~iS~v~e~-~-g~Ly 144 (160)
...|.++|.+|+.+..+.... +.+.....+... + |.||
T Consensus 165 ---------------------------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~ 211 (329)
T 3fvz_A 165 ---------------------------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLC 211 (329)
T ss_dssp ---------------------------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEE
T ss_pred ---------------------------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEE
Confidence 033567788888888775321 234556777765 3 8999
Q ss_pred EecCCCCeEEEEeC
Q psy4773 145 FGSPISKHLARVPL 158 (160)
Q Consensus 145 lGS~~~~~i~~~~l 158 (160)
+....+.-|-+++.
T Consensus 212 v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 212 VADRENGRIQCFKT 225 (329)
T ss_dssp EEETTTTEEEEEET
T ss_pred EEECCCCEEEEEEC
Confidence 99888888887765
No 29
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.40 E-value=0.1 Score=43.11 Aligned_cols=96 Identities=14% Similarity=0.084 Sum_probs=61.6
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|... .+|.|+.++|. ..++++..--..|.+|..|. +|.+|++=...
T Consensus 218 ~td~~~~~~I~r~~~dG~---~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~--------------------------- 267 (386)
T 3v65_B 218 WTDWGNTPRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH--------------------------- 267 (386)
T ss_dssp EEECSSSCEEEEEETTSC---SCEEEECSSCSCEEEEEEEGGGTEEEEEETTT---------------------------
T ss_pred EeccCCCCEEEEEeCCCC---CcEEEEECCCCCeeeEEEeCCCCEEEEEECCC---------------------------
Confidence 466676 89999999884 34555542334799999994 56677664221
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEe
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVP 157 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~ 157 (160)
..|.++|.+|.-.+.+-... +....++...+++||.....+..|-++.
T Consensus 268 ---------------------------~~I~~~d~dG~~~~~~~~~~--~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 268 ---------------------------HVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp ---------------------------TEEEEECTTSCSCEEEECSS--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------------------------CEEEEEeCCCCeeEEEEECC--CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 22445666665444443211 3445566667888888888888888776
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.37 E-value=0.098 Score=39.29 Aligned_cols=45 Identities=11% Similarity=-0.032 Sum_probs=27.8
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEee
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLV 51 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~ 51 (160)
+++...+|.+|...+ +....+...-...|-.|..+++|.+||+-.
T Consensus 41 ~~~~~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 85 (270)
T 1rwi_B 41 SEGMYGRVVKLATGS---TGTTVLPFNGLYQPQGLAVDGAGTVYVTDF 85 (270)
T ss_dssp ECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCCEEEEET
T ss_pred ccCCCCcEEEecCCC---cccceEeeCCcCCcceeEECCCCCEEEEcC
Confidence 456678888886543 223333221114789999999999999864
No 31
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.35 E-value=0.13 Score=40.11 Aligned_cols=46 Identities=11% Similarity=0.107 Sum_probs=33.1
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
+++...+|.+|..++ |+...+....++.|-.|..+++|.+|++...
T Consensus 61 ~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 61 LDVFEGNIFKINPET---KEIKRPFVSHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp EETTTCEEEEECTTT---CCEEEEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred EECCCCEEEEEeCCC---CcEEEEeeCCCCCcceEEECCCCcEEEEeCC
Confidence 456677888887654 5555555335567888999999999998754
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.30 E-value=0.15 Score=38.84 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=24.2
Q ss_pred CcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEe
Q psy4773 8 NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 50 (160)
Q Consensus 8 ~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval 50 (160)
..+|.+|..+|. ....|...-...|..|..|++|.+||+-
T Consensus 99 ~~~i~~~d~~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 99 THQIQIYNQYGQ---FVRKFGATILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp GCEEEEECTTSC---EEEEECTTTCSCEEEEEECTTSCEEEEE
T ss_pred CCEEEEECCCCc---EEEEecCccCCCceEEEEeCCCCEEEEE
Confidence 467777764432 1223322112368889999999999875
No 33
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.29 E-value=0.34 Score=40.21 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=65.1
Q ss_pred CCCcEEEEEEecCCCCCcceEecccCC--------------CCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHH
Q psy4773 6 YCNFSFWRYYLKGPKQGKSEVFIDGLP--------------GLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNI 71 (160)
Q Consensus 6 t~~~Ri~Ry~l~G~k~G~~evfid~LP--------------G~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~l 71 (160)
+....++||+++|...|+....++ |+ +.|..+..|++|+.+|+-..+
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~d-L~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~------------------ 157 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVN-FEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG------------------ 157 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEE-SHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES------------------
T ss_pred CCCCEEEEEcCCcCCCCCEEEEec-CccccccccccccccccCCceeEECCCCCEEEeCCCC------------------
Confidence 457889999999665566666665 65 357889999999999965332
Q ss_pred HHHHHHhhhhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEE-c-CC-CCCcCceEEEEE-CC-EEEEe
Q psy4773 72 RKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALH-S-VD-GSLKGSSDVEEY-NG-AYYFG 146 (160)
Q Consensus 72 Rk~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~-d-~~-g~~~~iS~v~e~-~g-~LylG 146 (160)
.+.|++||+||+.+..+- + +. ......+.++.+ +| .|+.-
T Consensus 158 -----------------------------------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 158 -----------------------------------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp -----------------------------------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred -----------------------------------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 033789999998555442 2 22 234567788877 44 45554
Q ss_pred cCCCCeEEEEeC
Q psy4773 147 SPISKHLARVPL 158 (160)
Q Consensus 147 S~~~~~i~~~~l 158 (160)
.- ..-|.++++
T Consensus 203 ~~-~g~L~~fD~ 213 (334)
T 2p9w_A 203 GG-PRALTAFDV 213 (334)
T ss_dssp SS-SSSEEEEEC
T ss_pred cC-CCeEEEEcC
Confidence 44 666777664
No 34
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.26 E-value=0.11 Score=47.53 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=67.2
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeec-CCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRD-SKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~-~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|... .||.|+.++|. ...+++..--..|.+|.+| .+|.++++=...
T Consensus 530 wtD~g~~~~I~~~~~dG~---~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~--------------------------- 579 (791)
T 3m0c_C 530 WTDWGTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------- 579 (791)
T ss_dssp EEECSSSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EecCCCCCeEEEEecCCC---ceEEEEeCCCCCceEEEEecCCCeEEEEeCCC---------------------------
Confidence 466665 89999999884 3455555233579999999 456655543111
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEe
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVP 157 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~ 157 (160)
..|.++|.+|+-...+-...+.+....++...+++||.....+..|-++.
T Consensus 580 ---------------------------~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 580 ---------------------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ---------------------------TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------------------------CcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 12456777787666665444556666677778899999999999988886
No 35
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.04 E-value=0.036 Score=46.10 Aligned_cols=51 Identities=10% Similarity=0.091 Sum_probs=39.2
Q ss_pred cccCCCcEEEEEEecC-----CCCCcceEecccCCC----CCCceeecCCCCeEEEeecC
Q psy4773 3 QTDYCNFSFWRYYLKG-----PKQGKSEVFIDGLPG----LPDNVKRDSKGNFLVSLVCP 53 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G-----~k~G~~evfid~LPG----~PDNI~~~~~G~fWval~~~ 53 (160)
|++....||.||.+++ .+.++.+++++++|. ++..|..+++|.+||++-..
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 4555678999999987 345567777777884 45669999999999998653
No 36
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.98 E-value=0.074 Score=41.01 Aligned_cols=45 Identities=9% Similarity=0.072 Sum_probs=34.7
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
++++...+|.+|..++ + .+.|.. -.+.|..|..+++|.+|++...
T Consensus 44 ~~~~~~~~i~~~~~~~---~-~~~~~~-~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDG---Q-LSPEMH-PSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp EEEGGGTEEEEEETTS---C-EEEEES-SCSSEEEEEECTTCCEEEEETT
T ss_pred EEeCCCCEEEEEECCC---C-eEEEEC-CCCCcceeeECCCCcEEEEecC
Confidence 4567788999998876 3 566665 4567888999999999998743
No 37
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.94 E-value=0.11 Score=43.30 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=31.1
Q ss_pred cccCCCcEEEEEEecCCCC-CcceEecccCCCCCCceeecC-CCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQ-GKSEVFIDGLPGLPDNVKRDS-KGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~-G~~evfid~LPG~PDNI~~~~-~G~fWval 50 (160)
++|+...+|+|+.++|... +..+.++..-...|.+|..|. .|+++++-
T Consensus 128 wsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d 177 (400)
T 3p5b_L 128 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD 177 (400)
T ss_dssp EEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE
Confidence 5788889999999987431 334555553445799999996 56666654
No 38
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.84 E-value=0.21 Score=41.51 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=64.5
Q ss_pred cccCC-CcEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYC-NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~-~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|.. ..+|.|+.++|. ...+++..--..|.+|..|. +|.++++=...
T Consensus 218 ~td~~~~~~I~~~~~dG~---~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~--------------------------- 267 (400)
T 3p5b_L 218 WTDWGTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------- 267 (400)
T ss_dssp EEECSSSCCEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EEeCCCCCEEEEEeCCCC---ccEEEEECCCCceEEEEEEeCCCEEEEEECCC---------------------------
Confidence 35655 378999999884 34555542224799999995 45555542111
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEe
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVP 157 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~ 157 (160)
..|.++|.+|.-.+.+-...+.+....++...+++||.....+..|-++.
T Consensus 268 ---------------------------~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 268 ---------------------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ---------------------------TEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ---------------------------CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 22456677777666665433445566677778899999998888888876
No 39
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.75 E-value=0.3 Score=38.29 Aligned_cols=45 Identities=11% Similarity=0.059 Sum_probs=35.8
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
++++...+|+|+..+| +...++. .++.|-.|..+++|++||+-..
T Consensus 47 v~d~~~~~I~~~d~~g----~~~~~~~-~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 47 VTNHEVGEIVSITPDG----NQQIHAT-VEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp EEETTTTEEEEECTTC----CEEEEEE-CSSEEEEEEECTTSCEEEEEEC
T ss_pred EEeCCCCeEEEECCCC----ceEEEEe-CCCCceeEEEcCCCcEEEEecc
Confidence 4677788999997664 3555665 7889999999999999998754
No 40
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.58 E-value=0.16 Score=46.54 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=30.2
Q ss_pred cccCCCcEEEEEEecCCCC-CcceEecccCCCCCCceeecCCC-CeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQ-GKSEVFIDGLPGLPDNVKRDSKG-NFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~-G~~evfid~LPG~PDNI~~~~~G-~fWval 50 (160)
++++...+|+|+.+.|.+. +..++++..--+.|.+|..|..| ++|++=
T Consensus 440 ~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD 489 (791)
T 3m0c_C 440 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD 489 (791)
T ss_dssp EEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE
T ss_pred EeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe
Confidence 4778889999999988542 45566666333579999999655 555543
No 41
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.52 E-value=0.16 Score=40.95 Aligned_cols=99 Identities=11% Similarity=0.002 Sum_probs=62.1
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCC-CCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhh
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK-GNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHL 81 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~-G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~ 81 (160)
++|+...+|.++.++|. ..++++..--..|.+|..|+. |.+|++-...
T Consensus 95 ~~d~~~~~I~~~~~dG~---~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------------------------- 143 (318)
T 3sov_A 95 WTDSETNRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------------------------- 143 (318)
T ss_dssp EEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEEGGGTEEEEEECSS----------------------------
T ss_pred EEECCCCEEEEEECCCC---cEEEEEeCCCCCccEEEEeCCCCEEEEEecCC----------------------------
Confidence 57888899999999874 345555323347999999964 5555544221
Q ss_pred hccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeCC
Q psy4773 82 LEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l~ 159 (160)
.+.|.+++.+|+....+-.. .+.....+... +++||..-.....|.+++++
T Consensus 144 -------------------------~~~I~r~~~dG~~~~~~~~~--~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 144 -------------------------VPKIERAGMDGSSRFIIINS--EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp -------------------------SCEEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -------------------------CCEEEEEEcCCCCeEEEEEC--CCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 12355667777665555432 23334455543 67788887777777777653
No 42
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.48 E-value=0.45 Score=41.40 Aligned_cols=31 Identities=6% Similarity=0.270 Sum_probs=25.3
Q ss_pred CCcCceEEEEEC--CEEEEecCCCCeEEEEeCC
Q psy4773 129 SLKGSSDVEEYN--GAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 129 ~~~~iS~v~e~~--g~LylGS~~~~~i~~~~l~ 159 (160)
.+...+.+.... |.||+.-..++.|-++.+.
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 466778888763 8999999999999998764
No 43
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.47 E-value=0.18 Score=38.96 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=32.0
Q ss_pred CCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEE-ECCEEEEecCCC
Q psy4773 105 GTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEE-YNGAYYFGSPIS 150 (160)
Q Consensus 105 ~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e-~~g~LylGS~~~ 150 (160)
...+.+.++|++|+.+..+..+. ..++++.+ .+|+||+|+-..
T Consensus 272 t~~ggl~~~d~~g~~~~~~~~~~---~~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 272 SYDGHLYAINPDGTEKWNFETGS---WIIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp CTTCEEEEECTTSCEEEEEECSS---CCCSCCEECTTCCEEEECTTS
T ss_pred cCCCCEEEECCCCcEEEEEEcCC---ccccceEEcCCCEEEEEcCCC
Confidence 33457889999999998887654 23555566 789999998764
No 44
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.26 E-value=0.26 Score=41.39 Aligned_cols=51 Identities=10% Similarity=0.305 Sum_probs=37.6
Q ss_pred EEEEEeCCCeEEEEEEcC--------CC------CCcCceEEEEE--CCEEEEecCCCCeEEEEeCC
Q psy4773 109 TLLVISSQGEIVDALHSV--------DG------SLKGSSDVEEY--NGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 109 ~vv~vd~~G~il~~l~d~--------~g------~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l~ 159 (160)
.|.++|++|++....... +| .+.....+... +|.||+.-..++-|-++.+.
T Consensus 363 ~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 363 CIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 356788899877666531 11 35567888876 59999999999999998764
No 45
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.05 E-value=0.21 Score=44.80 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=62.6
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeecCC-CCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK-GNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~-G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++++.. .+|.|+.++|.. .++++..--..|.+|..|.+ |.+|++=...
T Consensus 512 ~td~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~--------------------------- 561 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------- 561 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTCCEEEEETTT---------------------------
T ss_pred EcccCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCCEEEEEecCC---------------------------
Confidence 456554 789998888743 34554322257999999964 6677655321
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
..|.++|.+|.-.+.+....+.+....++...+++||.....+..|.++..
T Consensus 562 ---------------------------~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 562 ---------------------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ---------------------------TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ---------------------------CeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 124456666765555543323344455566677899999988888888763
No 46
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.70 E-value=0.66 Score=37.28 Aligned_cols=97 Identities=13% Similarity=0.080 Sum_probs=61.4
Q ss_pred cccCC-CcEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYC-NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~-~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|.. ..+|.|+.++|. ..+++++.--..|.+|..|. +|.+|++=...
T Consensus 138 ~td~~~~~~I~r~~~dG~---~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~--------------------------- 187 (318)
T 3sov_A 138 WTDWGEVPKIERAGMDGS---SRFIIINSEIYWPNGLTLDYEEQKLYWADAKL--------------------------- 187 (318)
T ss_dssp EEECSSSCEEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EEecCCCCEEEEEEcCCC---CeEEEEECCCCCccEEEEeccCCEEEEEECCC---------------------------
Confidence 45654 689999999874 24555532224799999996 56666653221
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
..|.++|.+|+-.+.+-. +.+....++...++.||.....+..|-++..
T Consensus 188 ---------------------------~~I~~~d~dG~~~~~~~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 188 ---------------------------NFIHKSNLDGTNRQAVVK--GSLPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp ---------------------------TEEEEEETTSCSCEEEEC--SCCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---------------------------CEEEEEcCCCCceEEEec--CCCCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 224556666665555542 2234455666677888888888888877764
No 47
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.52 E-value=0.7 Score=40.82 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=32.6
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEE
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVS 49 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWva 49 (160)
++|+...+|.|+.++|. ..++++..--+.|++|..|. .|+++++
T Consensus 365 ~sD~~~~~I~r~~~~g~---~~~~v~~~~~~~p~GlAvD~~~~~lY~t 409 (619)
T 3s94_A 365 WTDDEVRAIRRSFIDGS---GSQFVVTAQIAHPDGIAVDWVARNLYWT 409 (619)
T ss_dssp EEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred EEeCCCCeEEEEEcCCC---ccEEEEECCCCCcCceEEecccCcEEEE
Confidence 57888999999999883 35666653336899999995 5666555
No 48
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.48 E-value=0.091 Score=42.87 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=35.9
Q ss_pred cEEEEEEecCCCCCcceEecccCC---C---CCCceeecCCCCeEEEeec
Q psy4773 9 FSFWRYYLKGPKQGKSEVFIDGLP---G---LPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 9 ~Ri~Ry~l~G~k~G~~evfid~LP---G---~PDNI~~~~~G~fWval~~ 52 (160)
.||.||.+++.+..+.+++++++| + .|..|..+++|.+|++...
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 799999998755556677777787 2 6889999999999999854
No 49
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.46 E-value=0.16 Score=41.44 Aligned_cols=46 Identities=15% Similarity=0.113 Sum_probs=34.9
Q ss_pred CcEEEEEEecCC--CCCcceEecccCCC------CCCceeecCCCCeEEEeecC
Q psy4773 8 NFSFWRYYLKGP--KQGKSEVFIDGLPG------LPDNVKRDSKGNFLVSLVCP 53 (160)
Q Consensus 8 ~~Ri~Ry~l~G~--k~G~~evfid~LPG------~PDNI~~~~~G~fWval~~~ 53 (160)
..||.||.+++. +..+.+++++.+|. +|..|..+++|.+||+....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~ 150 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGEN 150 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCT
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCC
Confidence 569999999753 33456677777873 37889999999999998553
No 50
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.20 E-value=0.2 Score=38.37 Aligned_cols=44 Identities=25% Similarity=0.338 Sum_probs=30.4
Q ss_pred cCCCcEEEEEEecCCCCCcceEecc----cCCCCCCceeecCC-CCeEEEee
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVFID----GLPGLPDNVKRDSK-GNFLVSLV 51 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evfid----~LPG~PDNI~~~~~-G~fWval~ 51 (160)
++...+|.+|..++ |+.+.+.. ...+.|-.|..+++ |.+||+-.
T Consensus 42 ~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 42 GKPAGEILRIDLKT---GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TEECCEEEEECTTT---CCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred CCCCCEEEEEeCCC---CcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 56678899986543 55555543 13356788889998 88999863
No 51
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.10 E-value=0.59 Score=41.32 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=64.0
Q ss_pred cccCCC-cEEEEEEecCCCCCcceEecccCCCCCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhh
Q psy4773 3 QTDYCN-FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLH 80 (160)
Q Consensus 3 ~~Et~~-~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~ 80 (160)
++|... .+|.|.+++|.. .++++.+-=..|.+|..|. ++.++++=...
T Consensus 451 ~tD~g~~~~I~r~~~dG~~---~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~--------------------------- 500 (619)
T 3s94_A 451 WTDWGEIPKIERAALDGSD---RVVLVNTSLGWPNGLALDYDEGKIYWGDAKT--------------------------- 500 (619)
T ss_dssp EEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred EecCCCCCEEEEEccCCCc---cEEEEeCCCCCCeeeEEcccCCEEEEEECCC---------------------------
Confidence 466654 799999999853 4556653234799999996 56665553221
Q ss_pred hhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 81 LLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
..|.++|.+|.-.+.+.. +.+....++...+++||..-..+..|-+++.
T Consensus 501 ---------------------------~~I~~~~~dG~~~~~~~~--~~l~~P~glav~~~~ly~tD~~~~~I~~~~k 549 (619)
T 3s94_A 501 ---------------------------DKIEVMNTDGTGRRVLVE--DKIPHIFGFTLLGDYVYWTDWQRRSIERVHK 549 (619)
T ss_dssp ---------------------------TEEEEEESSSCCCEEEEE--CCCCSSCCEEEETTEEEEECTTSSCEEEEES
T ss_pred ---------------------------CEEEEEecCCCceEEEec--cCCCCcEEEEEECCEEEEeecCCCeEEEEEc
Confidence 224556777775555542 2233445666788899999999998888864
No 52
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.72 E-value=0.92 Score=36.77 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=36.3
Q ss_pred cCCCcEEEEEEecCCC----------CCcceEecccCCCCCCceeecC-CCCeEEEeecC
Q psy4773 5 DYCNFSFWRYYLKGPK----------QGKSEVFIDGLPGLPDNVKRDS-KGNFLVSLVCP 53 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k----------~G~~evfid~LPG~PDNI~~~~-~G~fWval~~~ 53 (160)
++...+|+|+..+|.- ....|+++.++- .|.+|..|+ +|.+|++=...
T Consensus 165 ~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 165 ASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp TCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC
T ss_pred CCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCC
Confidence 3456799999988720 124678887664 499999999 89999998775
No 53
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.62 E-value=0.98 Score=39.99 Aligned_cols=43 Identities=23% Similarity=0.335 Sum_probs=30.8
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecc-cCCCCCCceeecCC-CCeEEE
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDSK-GNFLVS 49 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~~-G~fWva 49 (160)
++|....+|.|+.++|. ..+.++. ++ +.|.+|..|.. |+++++
T Consensus 53 wtD~~~~~I~r~~~~g~---~~~~v~~~g~-~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 53 WTDISLKTISRAFMNGS---ALEHVVEFGL-DYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp EEETTTTEEEEEETTSC---SCEEEECSSC-SCCCEEEEETTTTEEEEE
T ss_pred EEECCCCeEEEEECCCC---CcEEEEeCCC-CCcceEEEEeCCCEEEEE
Confidence 47888999999999884 3556665 23 57999999954 555444
No 54
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.61 E-value=0.88 Score=35.59 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=60.1
Q ss_pred cEEEEEEecCCCCCcceEecccCCC----CCCceeecC-CCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhc
Q psy4773 9 FSFWRYYLKGPKQGKSEVFIDGLPG----LPDNVKRDS-KGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLE 83 (160)
Q Consensus 9 ~Ri~Ry~l~G~k~G~~evfid~LPG----~PDNI~~~~-~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~ 83 (160)
.+|.+|..++ |+.+++....+| +|..|..|+ +|++||+-..... .. ......++.
T Consensus 101 ~~i~~~d~~~---g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~----~~------~~~~~~~~~------- 160 (322)
T 2fp8_A 101 YHLSVVGSEG---GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLY----DD------RGVQQIMDT------- 160 (322)
T ss_dssp TEEEEECTTC---EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSC----CT------TCHHHHHHH-------
T ss_pred CCEEEEeCCC---CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccc----cc------cccceehcc-------
Confidence 4577775443 556667653333 688999999 9999998754211 00 011111111
Q ss_pred cCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeCC
Q psy4773 84 KIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l~ 159 (160)
....+.+.++|.++.-+..+.+. +.....+... +..||+....+..|.++.+.
T Consensus 161 --------------------~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 161 --------------------SDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp --------------------TCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred --------------------cCCCceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 11236788899763333333211 1223344444 34699987777788777653
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.61 E-value=2.6 Score=33.20 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=62.6
Q ss_pred CcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhccCCc
Q psy4773 8 NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEKIPS 87 (160)
Q Consensus 8 ~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~~~~~ 87 (160)
..+|..++++. ++...-++ ....|..|..+++|.+|++...... ..+
T Consensus 151 ~~~v~viD~~t---~~~~~~i~-~g~~p~~i~~~~dG~l~v~~~~~~~-~~~---------------------------- 197 (328)
T 3dsm_A 151 QNRILKIDTET---DKVVDELT-IGIQPTSLVMDKYNKMWTITDGGYE-GSP---------------------------- 197 (328)
T ss_dssp CCEEEEEETTT---TEEEEEEE-CSSCBCCCEECTTSEEEEEBCCBCT-TCS----------------------------
T ss_pred CCEEEEEECCC---CeEEEEEE-cCCCccceEEcCCCCEEEEECCCcc-CCc----------------------------
Confidence 56788887764 44333343 5567999999999999998754210 000
Q ss_pred cccceeccceeeeeeecCCeEEEEEEeC-CCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeC
Q psy4773 88 EDVKHVVGHFESILFLQGTRYTLLVISS-QGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~vv~vd~-~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l 158 (160)
.....+.|.++|. +|++++.+.-+.+. ....+... +++||+..- .|.+++.
T Consensus 198 ---------------~~~~~~~v~~id~~t~~v~~~~~~~~g~--~p~~la~~~d~~~lyv~~~---~v~~~d~ 251 (328)
T 3dsm_A 198 ---------------YGYEAPSLYRIDAETFTVEKQFKFKLGD--WPSEVQLNGTRDTLYWINN---DIWRMPV 251 (328)
T ss_dssp ---------------SCBCCCEEEEEETTTTEEEEEEECCTTC--CCEEEEECTTSCEEEEESS---SEEEEET
T ss_pred ---------------cccCCceEEEEECCCCeEEEEEecCCCC--CceeEEEecCCCEEEEEcc---EEEEEEC
Confidence 0111256778886 58888888755442 46677776 688998764 5555554
No 56
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.92 E-value=0.21 Score=42.58 Aligned_cols=46 Identities=13% Similarity=0.159 Sum_probs=35.3
Q ss_pred CcEEEEEEecCC--CCCcceEecccCCC----CCCceeecCCCCeEEEeecC
Q psy4773 8 NFSFWRYYLKGP--KQGKSEVFIDGLPG----LPDNVKRDSKGNFLVSLVCP 53 (160)
Q Consensus 8 ~~Ri~Ry~l~G~--k~G~~evfid~LPG----~PDNI~~~~~G~fWval~~~ 53 (160)
..||.||.+++. +.++.+++++.+|. ++..|..+++|.+||++...
T Consensus 113 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 113 QTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred ccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 469999999753 33456777776774 57889999999999998653
No 57
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.88 E-value=0.61 Score=36.76 Aligned_cols=50 Identities=24% Similarity=0.443 Sum_probs=39.0
Q ss_pred EEEEEe-CCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEeC
Q psy4773 109 TLLVIS-SQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 109 ~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~l 158 (160)
.+..+| .+|+++..+....+.+..+.++... +|.||+....++.|.++++
T Consensus 269 ~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 269 QGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp CEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 455667 6899999986444556777888775 5799999999999988875
No 58
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.67 E-value=0.96 Score=40.04 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=65.4
Q ss_pred cccCCCc--EEEEEEecCCCCCcceEecccCCCCCCceeecCC-CCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhh
Q psy4773 3 QTDYCNF--SFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSK-GNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFL 79 (160)
Q Consensus 3 ~~Et~~~--Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~-G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~ 79 (160)
++|.... +|.|..++|.. .++++.+--..|.+|..|.+ +.++++=...
T Consensus 448 ~tD~g~~~~~I~r~~~dG~~---~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~-------------------------- 498 (628)
T 4a0p_A 448 FTNLQERSPKIERAALDGTE---REVLFFSGLSKPIALALDSRLGKLFWADSDL-------------------------- 498 (628)
T ss_dssp EEEEETTEEEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTT--------------------------
T ss_pred EeecCCCCCeEEEEeCCCCC---cEEEEeccCCCccEEEEeCCCCEEEEEeCCC--------------------------
Confidence 4566655 89999999843 55666533457999999976 4544432211
Q ss_pred hhhccCCccccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 80 HLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
..+-++|.+|+-.+.+.. +.+....++...+++||..-..+..|-+++.
T Consensus 499 ----------------------------~~I~~~~~dG~~r~~~~~--~~~~~P~glav~~~~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 499 ----------------------------RRIESSDLSGANRIVLED--SNILQPVGLTVFENWLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp ----------------------------TEEEEEETTSCSCEEEEC--SSCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----------------------------CEEEEEeCCCCceEEEEc--CCCCCcEEEEEECCEEEEEECCCCeEEEEEC
Confidence 224456777777776654 2344566777788999999988888888764
No 59
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.63 E-value=0.33 Score=40.85 Aligned_cols=45 Identities=11% Similarity=-0.042 Sum_probs=35.4
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
++|+. +||+|+.+++ |+...++. -...|..|..|++|++||+-..
T Consensus 157 v~D~~-~~I~~id~~~---g~v~~~~~-~~~~P~giavd~dG~lyVad~~ 201 (433)
T 4hw6_A 157 WVGQR-DAFRHVDFVN---QYVDIKTT-NIGQCADVNFTLNGDMVVVDDQ 201 (433)
T ss_dssp EECBT-SCEEEEETTT---TEEEEECC-CCSCEEEEEECTTCCEEEEECC
T ss_pred EEeCC-CCEEEEECCC---CEEEEeec-CCCCccEEEECCCCCEEEEcCC
Confidence 35565 8999998764 77888876 3347999999999999998754
No 60
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.13 E-value=2 Score=34.15 Aligned_cols=50 Identities=8% Similarity=-0.060 Sum_probs=37.9
Q ss_pred EEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 108 YTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
+.|..+| +.|++++.+.-+.+ .+.-.+...+++||..+..++-+.+++..
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~--~fgeGi~~~g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDS--YFGEGLTLLNEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEETTCSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEecCCC--cceEEEEEeCCEEEEEEecCCEEEEEECC
Confidence 4467788 56999999875433 23345666799999999999999998864
No 61
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.10 E-value=1.3 Score=34.44 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=31.9
Q ss_pred EEEEEEeCC-CeEEEEEEcCC--C-CCcCceEEEEE-CCEEEEecCC
Q psy4773 108 YTLLVISSQ-GEIVDALHSVD--G-SLKGSSDVEEY-NGAYYFGSPI 149 (160)
Q Consensus 108 ~~vv~vd~~-G~il~~l~d~~--g-~~~~iS~v~e~-~g~LylGS~~ 149 (160)
..|+.+|++ |+++-.+...+ + .+..++.+... +|.+|+++..
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEecc
Confidence 468999988 99999997432 2 45667777764 7999999864
No 62
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.04 E-value=0.69 Score=41.20 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=24.1
Q ss_pred EEEEEecCCCCCcceEecccCCCCCCc----eeecCCCCeEEEe
Q psy4773 11 FWRYYLKGPKQGKSEVFIDGLPGLPDN----VKRDSKGNFLVSL 50 (160)
Q Consensus 11 i~Ry~l~G~k~G~~evfid~LPG~PDN----I~~~~~G~fWval 50 (160)
|.||..+ .++.+.|-. ..|+|+| |..|++|.+|++.
T Consensus 564 l~~~d~~---~~~~~~~~~-~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 564 FYCFNEK---DKQIKRYNT-TNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp EEEEETT---TTEEEEECG-GGTCSCSCEEEEEECTTSCEEEEE
T ss_pred ceeECCC---CCcEEEeCC-CCCCchhheEEEEECCCCCEEEEc
Confidence 4555433 344555543 5688887 6678999999987
No 63
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.99 E-value=1.1 Score=37.38 Aligned_cols=44 Identities=0% Similarity=-0.169 Sum_probs=33.6
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCC-eEEEeec
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVC 52 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~-fWval~~ 52 (160)
++.. .+|+++.+++ ++.+.++. -...|-.|..|++|+ +||+-..
T Consensus 155 ~d~~-~~I~~id~~~---~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 155 VGEQ-HPTRLIDFEK---EYVSTVYS-GLSKVRTICWTHEADSMIITNDQ 199 (430)
T ss_dssp EEBT-EEEEEEETTT---TEEEEEEC-CCSCEEEEEECTTSSEEEEEECC
T ss_pred EeCC-CcEEEEECCC---CEEEEEec-CCCCcceEEEeCCCCEEEEEeCC
Confidence 3444 8999999876 55677776 445799999999998 8888753
No 64
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.72 E-value=0.32 Score=39.73 Aligned_cols=44 Identities=23% Similarity=0.336 Sum_probs=34.0
Q ss_pred cEEEEEEecCC--CCCcceEecccCCC----CCCceeecCCCCeEEEeec
Q psy4773 9 FSFWRYYLKGP--KQGKSEVFIDGLPG----LPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 9 ~Ri~Ry~l~G~--k~G~~evfid~LPG----~PDNI~~~~~G~fWval~~ 52 (160)
.||.||.+++. +..+.+++++.+|. .|..|..+++|.+|++...
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 79999999875 34446677666773 5788999999999999754
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.49 E-value=0.24 Score=44.43 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=28.7
Q ss_pred cccCCCcEEEEEEecCCCCC-cceEecc-cCCCCCCceeec-CCCCeEEE
Q psy4773 3 QTDYCNFSFWRYYLKGPKQG-KSEVFID-GLPGLPDNVKRD-SKGNFLVS 49 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G-~~evfid-~LPG~PDNI~~~-~~G~fWva 49 (160)
++++...+|+|+.++|...| ..+.++. ++ ..|.+|..| ..|++|++
T Consensus 422 ~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~glavD~~~g~LY~t 470 (699)
T 1n7d_A 422 WSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIHSNIYWT 470 (699)
T ss_dssp ECCTTTTSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSSSBCEEC
T ss_pred EEecCCCeEEEEecCCCCCCcceEEEEeCCC-CCcceEEEEeeCCcEEEE
Confidence 46778889999999874322 2334443 23 359999998 45666654
No 66
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=90.47 E-value=0.79 Score=36.21 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=31.8
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval 50 (160)
++++...+|.+|..++ |+...+ . +|+.|-.|..+++|++|++.
T Consensus 65 ~~d~~~~~i~~~d~~~---~~~~~~-~-~~~~v~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 65 WFNILERELHELHLAS---GRKTVH-A-LPFMGSALAKISDSKQLIAS 107 (326)
T ss_dssp EEEGGGTEEEEEETTT---TEEEEE-E-CSSCEEEEEEEETTEEEEEE
T ss_pred EEECCCCEEEEEECCC---CcEEEE-E-CCCcceEEEEeCCCeEEEEE
Confidence 3566678899998775 444443 2 57778888889999999986
No 67
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.15 E-value=0.2 Score=40.87 Aligned_cols=48 Identities=10% Similarity=0.043 Sum_probs=37.7
Q ss_pred cccCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEe
Q psy4773 3 QTDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSL 50 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval 50 (160)
++|...+||+|+.+++.+.-..+.|+.+..+.|.+|..+++|.+||+-
T Consensus 293 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 293 IGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 578889999999998643222355666577789999999999999975
No 68
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.96 E-value=1.6 Score=34.03 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=31.7
Q ss_pred EEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 108 YTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 108 ~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
+.|..+|.+|+++-.+..+.. ..+.+...+|.+++.+..+..|-.++.
T Consensus 146 ~~v~~~d~~G~~~w~~~~~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 146 SEVREIAPNGQLLNSVKLSGT---PFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp TEEEEECTTSCEEEEEECSSC---CCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CEEEEECCCCCEEEEEECCCC---ccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 568899999999999986532 122333346777777776666655543
No 69
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=89.14 E-value=1.9 Score=32.96 Aligned_cols=47 Identities=21% Similarity=0.144 Sum_probs=31.0
Q ss_pred eEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEE-CCEEEEecCCCCeEEEEe
Q psy4773 107 RYTLLVISSQGEIVDALHSVDGSLKGSSDVEEY-NGAYYFGSPISKHLARVP 157 (160)
Q Consensus 107 ~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~-~g~LylGS~~~~~i~~~~ 157 (160)
.+.+.++|.+|+.+..+....+. ++..... +|.||+|+... .|-+++
T Consensus 234 ~~gl~~~~~~g~~~~~~~~~~~~---~~~~~~~~~g~l~v~t~~g-gl~~~d 281 (330)
T 3hxj_A 234 DGHLYAINPDGTEKWRFKTGKRI---ESSPVIGNTDTIYFGSYDG-HLYAIN 281 (330)
T ss_dssp TTEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEECTTC-EEEEEC
T ss_pred CCeEEEECCCCCEeEEeeCCCCc---cccceEcCCCeEEEecCCC-CEEEEC
Confidence 35678889999999888754432 3334444 79999998753 444443
No 70
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.07 E-value=1.6 Score=38.67 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=24.8
Q ss_pred EEEEEEeCCCeEEEEEEcCCCC-CcCceEEEEE-CCEEEEecCCCCeEEEEe
Q psy4773 108 YTLLVISSQGEIVDALHSVDGS-LKGSSDVEEY-NGAYYFGSPISKHLARVP 157 (160)
Q Consensus 108 ~~vv~vd~~G~il~~l~d~~g~-~~~iS~v~e~-~g~LylGS~~~~~i~~~~ 157 (160)
|++.++|++.+....+...+|- -..|.++.+. +|.||+|+. .-|.++.
T Consensus 559 Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~ 608 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYI 608 (781)
T ss_dssp EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEE
T ss_pred CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEE
Confidence 3335556544444445433331 1345566654 588888874 3455554
No 71
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.86 E-value=0.31 Score=39.88 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=38.7
Q ss_pred cccCCCcEEEEEEecCC-CCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKGP-KQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G~-k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
++|...+||.|+.+++. +..+.+.|+.+..+.|.++..+++|.+||+-..
T Consensus 281 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~ 331 (354)
T 3a9g_A 281 IACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSN 331 (354)
T ss_dssp EEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECT
T ss_pred EEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeC
Confidence 46778899999999864 233345666556778999999999999999853
No 72
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.83 E-value=6.9 Score=30.67 Aligned_cols=51 Identities=12% Similarity=0.212 Sum_probs=35.1
Q ss_pred EEEEEeC-CCeEEEEEEcCC--CCCcCceEEEEECCEEEEecC-CCCeEEEEeCC
Q psy4773 109 TLLVISS-QGEIVDALHSVD--GSLKGSSDVEEYNGAYYFGSP-ISKHLARVPLA 159 (160)
Q Consensus 109 ~vv~vd~-~G~il~~l~d~~--g~~~~iS~v~e~~g~LylGS~-~~~~i~~~~l~ 159 (160)
.|..+|. +++++..+.-.. +.......+...+++||+++. ..+.|.++++.
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 3566784 578888877433 222345555568999999998 48889888764
No 73
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.82 E-value=3.4 Score=36.66 Aligned_cols=46 Identities=7% Similarity=0.177 Sum_probs=27.4
Q ss_pred EEEEeCCCeEEEEEEcCCCC-CcCceEEEEE-CCEEEEecCCCCeEEEEe
Q psy4773 110 LLVISSQGEIVDALHSVDGS-LKGSSDVEEY-NGAYYFGSPISKHLARVP 157 (160)
Q Consensus 110 vv~vd~~G~il~~l~d~~g~-~~~iS~v~e~-~g~LylGS~~~~~i~~~~ 157 (160)
+.++|++.+....+...+|- -..|.++.+. +|.||+|+ ..-|.++.
T Consensus 564 l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~ 611 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFN 611 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEE
T ss_pred ceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEc
Confidence 35667665555556443332 2346666665 58999998 35566654
No 74
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.47 E-value=0.29 Score=40.60 Aligned_cols=50 Identities=18% Similarity=0.295 Sum_probs=41.9
Q ss_pred ccCCCcEEEEEEecCCC-CCcceEecccCCCCCCceeecCCCCeEEEeecC
Q psy4773 4 TDYCNFSFWRYYLKGPK-QGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCP 53 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k-~G~~evfid~LPG~PDNI~~~~~G~fWval~~~ 53 (160)
++...+||.|+.+++.+ .++.|.|+.+..|.|..|..++||.+||+-...
T Consensus 278 ~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 278 AGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp EESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTT
T ss_pred ccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCC
Confidence 35567899999999875 467788988788999999999999999998653
No 75
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=86.63 E-value=2.2 Score=37.69 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=13.9
Q ss_pred CCCceeecCCCCeEEEee
Q psy4773 34 LPDNVKRDSKGNFLVSLV 51 (160)
Q Consensus 34 ~PDNI~~~~~G~fWval~ 51 (160)
.+..|..|++|.+|+|..
T Consensus 518 ~~~~i~~d~~g~lWigt~ 535 (758)
T 3ott_A 518 SPNYLLCDEDGLLWVGFH 535 (758)
T ss_dssp CEEEEEECTTSCEEEEET
T ss_pred ccceEEECCCCCEEEEec
Confidence 345577899999999864
No 76
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=86.28 E-value=5.4 Score=31.32 Aligned_cols=47 Identities=6% Similarity=0.164 Sum_probs=25.7
Q ss_pred EEEEEEeCCCeEEEEEEcCCCCCcCceEEEE-ECCEEEEecCCCCeEEEE
Q psy4773 108 YTLLVISSQGEIVDALHSVDGSLKGSSDVEE-YNGAYYFGSPISKHLARV 156 (160)
Q Consensus 108 ~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e-~~g~LylGS~~~~~i~~~ 156 (160)
+.++++|.+|++++.+.-.. ......+.. .+|.+|+.+=..+-+.++
T Consensus 49 ~~I~~ld~~g~v~~~i~l~g--~~D~EGIa~~~~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 49 AAIVEMTTNGDLIRTIPLDF--VKDLETIEYIGDNQFVISDERDYAIYVI 96 (255)
T ss_dssp EEEEEEETTCCEEEEEECSS--CSSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCEEEEEecCC--CCChHHeEEeCCCEEEEEECCCCcEEEE
Confidence 55788898899998885321 122222222 345666654444444443
No 77
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.28 E-value=3.7 Score=36.37 Aligned_cols=39 Identities=8% Similarity=0.216 Sum_probs=24.7
Q ss_pred EEEEeCCCeEEEEEEcCCCC-CcCceEEEE-ECCEEEEecC
Q psy4773 110 LLVISSQGEIVDALHSVDGS-LKGSSDVEE-YNGAYYFGSP 148 (160)
Q Consensus 110 vv~vd~~G~il~~l~d~~g~-~~~iS~v~e-~~g~LylGS~ 148 (160)
+.++|.+++.+..+....+- ...|.++.+ .+|.||+|+.
T Consensus 517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 35677766666666543332 245777777 4688999886
No 78
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.20 E-value=9.9 Score=31.15 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=24.7
Q ss_pred CcEEEEEEecCCCCCcceEe----cccCCCC-CC-ceeecC-CCCeEEEe
Q psy4773 8 NFSFWRYYLKGPKQGKSEVF----IDGLPGL-PD-NVKRDS-KGNFLVSL 50 (160)
Q Consensus 8 ~~Ri~Ry~l~G~k~G~~evf----id~LPG~-PD-NI~~~~-~G~fWval 50 (160)
..+|.||.+++ +...+| ...-.+. |- .|..++ +|.+|++-
T Consensus 239 ~~~I~~~d~~~---~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 239 NKNFGRFNVKT---QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp TCEEEEEETTT---CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred CCcEEEEECCC---CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 56899998875 334555 2211121 33 788888 57788864
No 79
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.01 E-value=2.8 Score=35.42 Aligned_cols=28 Identities=11% Similarity=0.174 Sum_probs=24.0
Q ss_pred CcceEecccCCCCCCceeecCCCCeEEEe
Q psy4773 22 GKSEVFIDGLPGLPDNVKRDSKGNFLVSL 50 (160)
Q Consensus 22 G~~evfid~LPG~PDNI~~~~~G~fWval 50 (160)
=+.++|+++|. .|=.|..+++|++||+-
T Consensus 17 f~~~~~a~~l~-~P~~~a~~pdG~l~V~e 44 (454)
T 1cru_A 17 FDKKVILSNLN-KPHALLWGPDNQIWLTE 44 (454)
T ss_dssp SCEEEEECCCS-SEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCC-CceEEEEcCCCcEEEEE
Confidence 45788998777 69999999999999985
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=82.85 E-value=14 Score=28.08 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=27.9
Q ss_pred EEEe-CCCeEEEEEEcCC-CCCcCceEEEEE--CCEEEEecCCCCeEEEEeC
Q psy4773 111 LVIS-SQGEIVDALHSVD-GSLKGSSDVEEY--NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 111 v~vd-~~G~il~~l~d~~-g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l 158 (160)
..+| .+|+++..+.... +....+.++... +++||+++...+.|.++++
T Consensus 209 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 209 ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 3455 4577777666533 223345555544 4667777777677776665
No 81
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=81.35 E-value=18 Score=28.85 Aligned_cols=52 Identities=19% Similarity=0.118 Sum_probs=40.2
Q ss_pred EEEEEEeC-CCeEEEEEEcCC-C-CCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 108 YTLLVISS-QGEIVDALHSVD-G-SLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd~-~G~il~~l~d~~-g-~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
..+..+|+ +++++..+.-.+ + .+..+.+....+|+||......+.|.+++..
T Consensus 155 ~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 155 TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 45667884 588999887533 3 3567778777899999999999999999864
No 82
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=80.60 E-value=16 Score=27.58 Aligned_cols=39 Identities=8% Similarity=-0.132 Sum_probs=25.3
Q ss_pred CcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCC-eEEEe
Q psy4773 8 NFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSL 50 (160)
Q Consensus 8 ~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~-fWval 50 (160)
..+|..+.+++ |+....+. .++.|..+..+++|. +|++-
T Consensus 68 ~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 68 GGVVYRLDPVT---LEVTQAIH-NDLKPFGATINNTTQTLWFGN 107 (353)
T ss_dssp SEEEEEECTTT---CCEEEEEE-ESSCCCSEEEETTTTEEEEEE
T ss_pred CccEEEEcCCC---CeEEEEEe-cCCCcceEEECCCCCEEEEEe
Confidence 34666665543 44444454 567789999999987 56554
No 83
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=80.01 E-value=12 Score=29.29 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=34.3
Q ss_pred EEEEEEeC-CCeEEEEEEcCCC---CCcCceEEEEE--CCEEEEecC---CCCeEEEEeC
Q psy4773 108 YTLLVISS-QGEIVDALHSVDG---SLKGSSDVEEY--NGAYYFGSP---ISKHLARVPL 158 (160)
Q Consensus 108 ~~vv~vd~-~G~il~~l~d~~g---~~~~iS~v~e~--~g~LylGS~---~~~~i~~~~l 158 (160)
..++++|. +|+++..+.-+.. ....+..+... ++++|++.. ...-|-++++
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 34678895 5998888875432 12345666665 589999977 6667766665
No 84
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=77.91 E-value=24 Score=27.92 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=39.6
Q ss_pred EEEEEEeC-CCeEEEEEEcCC-C-CCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 108 YTLLVISS-QGEIVDALHSVD-G-SLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd~-~G~il~~l~d~~-g-~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
..+..+|+ +++++..+.-.+ + .+..+.+....+|+||......+.|.+++..
T Consensus 146 ~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 146 PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTT
T ss_pred CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECC
Confidence 34567885 488999887543 3 3466667777799999999999999999754
No 85
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=76.91 E-value=21 Score=29.95 Aligned_cols=101 Identities=12% Similarity=-0.074 Sum_probs=59.0
Q ss_pred cEEEEEEecCCCCCcceEecccCCCCCCceeecCCCC-eEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhccCCc
Q psy4773 9 FSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEKIPS 87 (160)
Q Consensus 9 ~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~-fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~~~~~ 87 (160)
.+|..++++. ++..--+. +...| +|..++||. +||+-.... |.
T Consensus 99 ~~VsVID~~t---~~vv~~I~-vG~~P-gia~SpDgk~lyVan~~~~--~~----------------------------- 142 (426)
T 3c75_H 99 TQQFVIDGST---GRILGMTD-GGFLP-HPVAAEDGSFFAQASTVFE--RI----------------------------- 142 (426)
T ss_dssp EEEEEEETTT---TEEEEEEE-ECSSC-EEEECTTSSCEEEEEEEEE--ET-----------------------------
T ss_pred CeEEEEECCC---CEEEEEEE-CCCCC-ceEECCCCCEEEEEecccc--cc-----------------------------
Confidence 6788887654 33333333 45689 999999986 788764310 00
Q ss_pred cccceeccceeeeeeecCCeEEEEEEe-CCCeEEEEEEcCC-CCC---cCceEEEE--ECCEEEEecCC-CCeEEEEeCC
Q psy4773 88 EDVKHVVGHFESILFLQGTRYTLLVIS-SQGEIVDALHSVD-GSL---KGSSDVEE--YNGAYYFGSPI-SKHLARVPLA 159 (160)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~vv~vd-~~G~il~~l~d~~-g~~---~~iS~v~e--~~g~LylGS~~-~~~i~~~~l~ 159 (160)
.+ ......|..+| .+++++..+.-+. ++. ...-.+.. .+.+||+++.. .+.|.++++.
T Consensus 143 ---~~-----------G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~ 208 (426)
T 3c75_H 143 ---AR-----------GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE 208 (426)
T ss_dssp ---TE-----------EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred ---cc-----------CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC
Confidence 00 01124567778 4688888887541 111 12223333 45789988875 6788888764
No 86
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=76.09 E-value=7.3 Score=32.13 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=15.5
Q ss_pred CCCCceeecC-CCCeEEEee
Q psy4773 33 GLPDNVKRDS-KGNFLVSLV 51 (160)
Q Consensus 33 G~PDNI~~~~-~G~fWval~ 51 (160)
.||.+++-|+ +|.||++-.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l 32 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNL 32 (334)
T ss_dssp CCCSCEEEETTTTEEEEEET
T ss_pred cCCcCccCcCCCCEEEEEec
Confidence 3999999976 688999763
No 87
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.98 E-value=25 Score=30.82 Aligned_cols=39 Identities=26% Similarity=0.432 Sum_probs=21.4
Q ss_pred EEEEEEecCCCCCcceEecccCCCCCCc----eeecCCCCeEEEee
Q psy4773 10 SFWRYYLKGPKQGKSEVFIDGLPGLPDN----VKRDSKGNFLVSLV 51 (160)
Q Consensus 10 Ri~Ry~l~G~k~G~~evfid~LPG~PDN----I~~~~~G~fWval~ 51 (160)
-|.+|..+. ++.+.|...-.+.|+| |..|.+|.+|||..
T Consensus 122 Gl~~~~~~~---~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~ 164 (758)
T 3ott_A 122 GLYTYQLQS---RKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY 164 (758)
T ss_dssp EEEEEETTT---CCEEEECHHHHCCSCSCEEEEEECTTCCEEEEET
T ss_pred cceeEeCCC---CeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeC
Confidence 345554432 4444442212355555 34678999999864
No 88
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.01 E-value=14 Score=32.96 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=24.5
Q ss_pred EEEEEEeC-CCeEEEEEEcCCCCCcCceEEEEEC--CEEEEe
Q psy4773 108 YTLLVISS-QGEIVDALHSVDGSLKGSSDVEEYN--GAYYFG 146 (160)
Q Consensus 108 ~~vv~vd~-~G~il~~l~d~~g~~~~iS~v~e~~--g~LylG 146 (160)
..|+++|+ +|++...+..|.+ ..++.+...- .+||+.
T Consensus 509 n~v~~~dp~tGel~~fl~~P~~--aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 509 NQMLCADPATGEIRRFMVGPIG--CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEECTTTCCEEEEEECCTT--CEEEEEEECTTSSEEEEE
T ss_pred ceEEEEeCCCCeEEEEEeCCCC--ccccCCEECCCCCEEEEE
Confidence 35677786 5888777766543 4567777763 477774
No 89
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=73.42 E-value=27 Score=26.28 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=24.5
Q ss_pred CCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCC-eEEE
Q psy4773 6 YCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVS 49 (160)
Q Consensus 6 t~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~-fWva 49 (160)
....+|..|.++..+.-+...-+. ..+.|..+..+++|. +|++
T Consensus 195 ~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 195 LIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp TTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEE
T ss_pred CCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEE
Confidence 345677788776422100011122 346788899999988 4443
No 90
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.06 E-value=18 Score=27.22 Aligned_cols=42 Identities=7% Similarity=-0.087 Sum_probs=27.0
Q ss_pred cCCCcEEEEEEecCCCCCcceEecccCCC--CCCceeecCCCC-eEEEe
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVFIDGLPG--LPDNVKRDSKGN-FLVSL 50 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evfid~LPG--~PDNI~~~~~G~-fWval 50 (160)
.+....|..+++++ |+...-+. +++ .|..+..+++|. +|++.
T Consensus 17 ~~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~ 61 (349)
T 1jmx_B 17 TNYPNNLHVVDVAS---DTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLN 61 (349)
T ss_dssp EETTTEEEEEETTT---TEEEEEEE-CSSCCSSCEEEECTTSSEEEEEE
T ss_pred eCCCCeEEEEECCC---CcEEEEEe-cCCCCCCceeEECCCCCEEEEEe
Confidence 34566788887764 44333333 565 688899999987 45543
No 91
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=72.11 E-value=33 Score=26.73 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=38.2
Q ss_pred EEEEeC-CCeEEEEEEcCC-C-CCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 110 LLVISS-QGEIVDALHSVD-G-SLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 110 vv~vd~-~G~il~~l~d~~-g-~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
+..+|+ +.+++..++-.+ + .+..+.+....+|+||......+.|.+++..
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTT
T ss_pred EEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECC
Confidence 456784 578888887533 3 3466777777899999999999999999864
No 92
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=71.71 E-value=3.8 Score=36.37 Aligned_cols=19 Identities=21% Similarity=0.274 Sum_probs=17.0
Q ss_pred CCCceeecCCCCeEEEeec
Q psy4773 34 LPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 34 ~PDNI~~~~~G~fWval~~ 52 (160)
.||||..|+.|++||+-=.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg 495 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDG 495 (592)
T ss_dssp CEEEEEECTTCCEEEEECC
T ss_pred CCcceEECCCCCEEEEecC
Confidence 6999999999999998754
No 93
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=70.42 E-value=37 Score=26.63 Aligned_cols=47 Identities=4% Similarity=-0.097 Sum_probs=30.7
Q ss_pred EEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeC
Q psy4773 108 YTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 108 ~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l 158 (160)
+.+..+| .+++++..+.-..+ .-..+...+++||++. .++.|..++.
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~---~g~glt~Dg~~l~vs~-gs~~l~viD~ 133 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMK---DGWGLATDGKILYGSD-GTSILYEIDP 133 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSS---SCCEEEECSSSEEEEC-SSSEEEEECT
T ss_pred CEEEEEECCCCcEEEEEECCCC---CeEEEEECCCEEEEEC-CCCeEEEEEC
Confidence 4456688 46899998874311 1123444578899887 6788887764
No 94
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=69.28 E-value=7.7 Score=30.42 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=41.3
Q ss_pred eeeecCCeEEEEEEeCCCeEEEEEEcCCC------CCcCceEEEEE-CCEEEEecCCCCeEEEEe
Q psy4773 100 ILFLQGTRYTLLVISSQGEIVDALHSVDG------SLKGSSDVEEY-NGAYYFGSPISKHLARVP 157 (160)
Q Consensus 100 ~~~~~~~~~~vv~vd~~G~il~~l~d~~g------~~~~iS~v~e~-~g~LylGS~~~~~i~~~~ 157 (160)
++.......+++++|.+|+++..+.-..| .++..-.+... +|.||+.|= .|.+-+..
T Consensus 187 lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~ 250 (255)
T 3qqz_A 187 LLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFT 250 (255)
T ss_dssp EEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEE
T ss_pred EEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEE
Confidence 34455666789999999999999987644 24566677664 589999974 45776665
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=64.49 E-value=43 Score=26.41 Aligned_cols=50 Identities=2% Similarity=-0.100 Sum_probs=38.7
Q ss_pred EEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 108 YTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
+.|.++| .+|++++.+.-+..- +.-.+...+++||..+..++-+.+++..
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred ceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 5788899 569999999765432 2334566799999999999999988864
No 96
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=62.32 E-value=41 Score=26.14 Aligned_cols=50 Identities=8% Similarity=-0.001 Sum_probs=38.6
Q ss_pred EEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 108 YTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
+.|.++| .+|++++...-+..-+ --.+...+++||..+..++-+-+++..
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~f--geGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYF--GAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCC--EEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCCcc--eeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 5677889 5799999998665432 234556799999999999999888864
No 97
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=61.67 E-value=46 Score=24.63 Aligned_cols=43 Identities=7% Similarity=-0.081 Sum_probs=28.5
Q ss_pred ccCCCcEEEEEEecCCCCCcceEecccCCC---CCCceeecCCCC-eEEEe
Q psy4773 4 TDYCNFSFWRYYLKGPKQGKSEVFIDGLPG---LPDNVKRDSKGN-FLVSL 50 (160)
Q Consensus 4 ~Et~~~Ri~Ry~l~G~k~G~~evfid~LPG---~PDNI~~~~~G~-fWval 50 (160)
+.....+|..++++. |+....+. +++ -|..+..+++|. ++++.
T Consensus 6 ~~~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~ 52 (337)
T 1pby_B 6 APARPDKLVVIDTEK---MAVDKVIT-IADAGPTPMVPMVAPGGRIAYATV 52 (337)
T ss_dssp EEETTTEEEEEETTT---TEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEE
T ss_pred EcCCCCeEEEEECCC---CcEEEEEE-cCCCCCCccceEEcCCCCEEEEEe
Confidence 344567788887764 44444444 666 699999999996 45544
No 98
>3it8_D 2L protein; MHC class I homolog, cell membrane, cytokine, disulfide bond glycoprotein, lipoprotein, membrane, myristate; HET: NAG; 2.80A {Yaba-like disease virus}
Probab=52.98 E-value=8.9 Score=31.59 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=20.1
Q ss_pred CCCCCCceeecCCC-Ce--EEEeecC
Q psy4773 31 LPGLPDNVKRDSKG-NF--LVSLVCP 53 (160)
Q Consensus 31 LPG~PDNI~~~~~G-~f--Wval~~~ 53 (160)
=||||-+++.++|| +| |+++.-+
T Consensus 247 ~~~~~~~~lPngDG~TyQ~w~sv~Vp 272 (324)
T 3it8_D 247 EPGFPWNIKKDKDANTYSLTDLVRTT 272 (324)
T ss_dssp STTSCCCEECCTTSSCEEEEEEEEEC
T ss_pred CCCCCCCeeECCCCCeEEEEEEEEEC
Confidence 48999999999999 76 8888765
No 99
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=50.08 E-value=27 Score=27.81 Aligned_cols=57 Identities=12% Similarity=-0.078 Sum_probs=40.6
Q ss_pred eeeecCCeEEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 100 ILFLQGTRYTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 100 ~~~~~~~~~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
+......++.|.++| ++|++++.+ -+..- +.-.+...+++||..+..++-+.+++..
T Consensus 67 Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 67 FFESTGHQGTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEETTTTEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESSSCEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEccCCEEEEEECC
Confidence 344455556677888 569999988 43322 2334666789999999999999988864
No 100
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=48.38 E-value=89 Score=23.83 Aligned_cols=37 Identities=8% Similarity=0.152 Sum_probs=22.4
Q ss_pred CCcEEEEEEecCCCCCcceEecccCCCCCC------ceeecCCCCeE
Q psy4773 7 CNFSFWRYYLKGPKQGKSEVFIDGLPGLPD------NVKRDSKGNFL 47 (160)
Q Consensus 7 ~~~Ri~Ry~l~G~k~G~~evfid~LPG~PD------NI~~~~~G~fW 47 (160)
...+|..|.+++ |+.+.... ++..|. .|..+++|.+.
T Consensus 231 ~~~~v~v~~~~~---g~~~~~~~-~~~~~~~~~~~~~i~~spdg~~l 273 (361)
T 3scy_A 231 IGGTVIAFRYAD---GMLDEIQT-VAADTVNAQGSGDIHLSPDGKYL 273 (361)
T ss_dssp TTCEEEEEEEET---TEEEEEEE-EESCSSCCCCEEEEEECTTSSEE
T ss_pred CCCeEEEEEecC---CceEEeEE-EecCCCCCCCcccEEECCCCCEE
Confidence 456777777763 44433332 444443 78889999854
No 101
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=47.39 E-value=17 Score=30.39 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=37.4
Q ss_pred cccCCCcEEEEEEecC-C-CCCcceEecccC-CCCCCceeecCCCCeEEEeec
Q psy4773 3 QTDYCNFSFWRYYLKG-P-KQGKSEVFIDGL-PGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~G-~-k~G~~evfid~L-PG~PDNI~~~~~G~fWval~~ 52 (160)
|++.....|.++.-++ + +.++.++++.+= =-+||.++.+.+|.+|+-...
T Consensus 291 ~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 291 FAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred EEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 5667778899988776 4 346678877732 128999999999999997643
No 102
>3f62_A Interleukin 18 binding protein; immunoglobulin, IL-18, beta trefoil, cytokine, secreted; 2.00A {Ectromelia virus}
Probab=46.74 E-value=10 Score=26.25 Aligned_cols=27 Identities=26% Similarity=0.540 Sum_probs=19.7
Q ss_pred EEEEecCC-CCCcceEecccCCCCCCceeec
Q psy4773 12 WRYYLKGP-KQGKSEVFIDGLPGLPDNVKRD 41 (160)
Q Consensus 12 ~Ry~l~G~-k~G~~evfid~LPG~PDNI~~~ 41 (160)
.-|||.+. +..+...|+++||| .|+-+
T Consensus 34 ~lYWL~ng~~~~~~~sFiEhLp~---~l~E~ 61 (109)
T 3f62_A 34 YMYWLAKDMKSDEDTKFIEHLGD---GINED 61 (109)
T ss_dssp EEEEEEEETTSCCCCEEGGGSCT---TEEEC
T ss_pred EEEEEeCCcccccccchhhhCCC---ccccc
Confidence 45999654 66667799999887 67643
No 103
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=43.73 E-value=55 Score=28.16 Aligned_cols=49 Identities=8% Similarity=0.075 Sum_probs=32.2
Q ss_pred cccCCCcEEEEEEec-------CCCC---------CcceEecccCC--CCCCceeecCCCC-eEEEeec
Q psy4773 3 QTDYCNFSFWRYYLK-------GPKQ---------GKSEVFIDGLP--GLPDNVKRDSKGN-FLVSLVC 52 (160)
Q Consensus 3 ~~Et~~~Ri~Ry~l~-------G~k~---------G~~evfid~LP--G~PDNI~~~~~G~-fWval~~ 52 (160)
+++....+|+||.++ +... |..+.+.. +| +.|=.|..+++|+ +||+-..
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~ 330 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-IADPSWEFQIFIHPTGKYAYFGVIN 330 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-CSSSSCCEEEEECTTSSEEEEEETT
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEe-cCCCCCceEEEEcCCCCEEEEEeCC
Confidence 366778899999997 3322 11223333 44 3567899999998 6888744
No 104
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=42.71 E-value=1.4e+02 Score=24.33 Aligned_cols=41 Identities=10% Similarity=0.147 Sum_probs=27.8
Q ss_pred EEEEEEeCCCeEEEEEEcCCC-CCcCceEEEE-ECCEEEEecC
Q psy4773 108 YTLLVISSQGEIVDALHSVDG-SLKGSSDVEE-YNGAYYFGSP 148 (160)
Q Consensus 108 ~~vv~vd~~G~il~~l~d~~g-~~~~iS~v~e-~~g~LylGS~ 148 (160)
.-++++|.+|+....+...++ .+...-++.. .+|.+|+|+.
T Consensus 141 ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 141 VEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred EEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 457889988887666655443 4555555554 5799999875
No 105
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=42.25 E-value=1.1e+02 Score=23.10 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=23.5
Q ss_pred cCCCcEEEEEEecCCCCCcceEecc--cCCC------CCCceeecCCCCe-EEEe
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVFID--GLPG------LPDNVKRDSKGNF-LVSL 50 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evfid--~LPG------~PDNI~~~~~G~f-Wval 50 (160)
.....+|..|.++.. .|+.+.... .+|. .|..+..+++|.+ |++.
T Consensus 205 ~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 205 GELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp ETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 344566777766632 243332221 1331 2445889999984 4544
No 106
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=40.35 E-value=1.3e+02 Score=23.53 Aligned_cols=52 Identities=6% Similarity=-0.049 Sum_probs=30.4
Q ss_pred EEEEEEeC-CCeEEEEEEcCCCCC---cCceEEEE--ECCEEEEecCC-CCeEEEEeCC
Q psy4773 108 YTLLVISS-QGEIVDALHSVDGSL---KGSSDVEE--YNGAYYFGSPI-SKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd~-~G~il~~l~d~~g~~---~~iS~v~e--~~g~LylGS~~-~~~i~~~~l~ 159 (160)
..|..+|. .++++..+.-+.+.. .....+.. .+.+||.++.. .+.|.++++.
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred CEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence 44556674 578888776432111 23344444 35678888765 5777777653
No 107
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=35.65 E-value=1.8e+02 Score=23.85 Aligned_cols=52 Identities=10% Similarity=-0.143 Sum_probs=32.6
Q ss_pred EEEEEEe-CCCeEEEEEEcCCCC----CcCceEEEE--ECCEEEEecCC-CCeEEEEeCC
Q psy4773 108 YTLLVIS-SQGEIVDALHSVDGS----LKGSSDVEE--YNGAYYFGSPI-SKHLARVPLA 159 (160)
Q Consensus 108 ~~vv~vd-~~G~il~~l~d~~g~----~~~iS~v~e--~~g~LylGS~~-~~~i~~~~l~ 159 (160)
..|-.+| ..++++..+.-+.|. -.....+.. .|.+||+.+.. .+.|.++++.
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 4566778 468888888755421 112223333 45788988874 6788888764
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=31.92 E-value=1.7e+02 Score=22.26 Aligned_cols=39 Identities=10% Similarity=-0.039 Sum_probs=22.6
Q ss_pred CCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEE
Q psy4773 6 YCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLV 48 (160)
Q Consensus 6 t~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWv 48 (160)
+....|..+.++. |+....+. ....|-.+..+++|.+.+
T Consensus 9 ~~d~~v~v~d~~~---~~~~~~~~-~~~~~~~~~~s~dg~~l~ 47 (391)
T 1l0q_A 9 SESDNISVIDVTS---NKVTATIP-VGSNPMGAVISPDGTKVY 47 (391)
T ss_dssp TTTTEEEEEETTT---TEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred CCCCEEEEEECCC---CeEEEEee-cCCCcceEEECCCCCEEE
Confidence 4456677777653 33333333 344566777888887543
No 109
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=30.63 E-value=1.9e+02 Score=22.51 Aligned_cols=85 Identities=11% Similarity=0.024 Sum_probs=0.0
Q ss_pred cEEEEEEecCCCCCcceEecc-cCCCCCCceeecCCCCeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhccCCc
Q psy4773 9 FSFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEKIPS 87 (160)
Q Consensus 9 ~Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~~G~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~~~~~ 87 (160)
.+|.|.+++| +..+++++ .+|- +..+.+=-||..-...
T Consensus 207 ~~I~~~~ldG---~~~~~Lt~~~~~~----~~~~g~~Iy~~~~~~~---------------------------------- 245 (302)
T 3s25_A 207 NAIVHVNINN---PNPVVLTEANIEH----YNVYGSLIFYQRGGDN---------------------------------- 245 (302)
T ss_dssp TEEEEECSSS---CCCEECSCSCEEE----EEEETTEEEEEECSSS----------------------------------
T ss_pred cEEEEEECCC---CCeEEEeCCCcce----EEECCCEEEEEECCCC----------------------------------
Q ss_pred cccceeccceeeeeeecCCeEEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCCeEEEEeCC
Q psy4773 88 EDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARVPLA 159 (160)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~~i~~~~l~ 159 (160)
..+-+++.||.-.+.+...+ +..+...++++|........|.+++++
T Consensus 246 --------------------~~i~~~~~DG~~r~~l~~~~-----~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 246 --------------------PALCVVKNDGTGFKELAKGE-----FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp --------------------CEEEEEETTSCCCEEEEESC-----EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred --------------------cEEEEEECCCCccEEeeCCc-----cceEEEeCCEEEEEECCCCeEEEEECC
No 110
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=29.81 E-value=1.6e+02 Score=22.66 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=30.9
Q ss_pred CeEEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEECCEEEEecCCCC
Q psy4773 106 TRYTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISK 151 (160)
Q Consensus 106 ~~~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~~~~ 151 (160)
..+.+..+| .+|+++...+...+. ..+.....+++||+++-...
T Consensus 326 ~~g~l~~~d~~tG~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 326 SEGYLHWINVEDGRFVAQQKVDSSG--FQTEPVAADGKLLIQAKDGT 370 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCTTC--BCSCCEEETTEEEEEBTTSC
T ss_pred CCCeEEEEECCCCcEEEEEecCCCc--ceeCCEEECCEEEEEeCCCE
Confidence 346788889 679999888764332 23445557999999997654
No 111
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=29.46 E-value=1.8e+02 Score=22.31 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=32.9
Q ss_pred eEEEEEEeC-CCeEEEEEEcCCC-------CCcCceEEEEECCEEEEecCCCCeEEEEe
Q psy4773 107 RYTLLVISS-QGEIVDALHSVDG-------SLKGSSDVEEYNGAYYFGSPISKHLARVP 157 (160)
Q Consensus 107 ~~~vv~vd~-~G~il~~l~d~~g-------~~~~iS~v~e~~g~LylGS~~~~~i~~~~ 157 (160)
.+.|..+|. +|+++-.+..+.. .....+.....++++|+++.. ..|-.++
T Consensus 62 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g~l~a~d 119 (376)
T 3q7m_A 62 AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-AQVYALN 119 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-SEEEEEE
T ss_pred CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-CEEEEEE
Confidence 467889996 6999877775432 112345566789999999864 3444444
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=28.23 E-value=1.8e+02 Score=21.42 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=21.6
Q ss_pred EEEEe-CCCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeC
Q psy4773 110 LLVIS-SQGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 110 vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l 158 (160)
|..+| .+|+++..+..+.. ..+..+... +.++|+.+-....|.++++
T Consensus 23 v~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp EEEEETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcEEEEEecCCC--CCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 34455 34666666553321 012333332 2356666555555555544
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=26.63 E-value=2.2e+02 Score=21.93 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=0.0
Q ss_pred CCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCC-CeEEEeecCCCCcChhhhhhcCCChHHHHHHHHhhhhhcc
Q psy4773 6 YCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKG-NFLVSLVCPVDEYTPQLLHIIGPFPNIRKFVARFLHLLEK 84 (160)
Q Consensus 6 t~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G-~fWval~~~r~~~~~~~~~~l~~~P~lRk~i~~l~~~~~~ 84 (160)
+....|..|.+++ |+....+. .++.|..+..+++| .++++....
T Consensus 280 ~~dg~i~~~d~~~---~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~------------------------------- 324 (433)
T 3bws_A 280 SGGGRLGIYSMDK---EKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCC------------------------------- 324 (433)
T ss_dssp SCCEEEEEEETTT---TEEEEEEE-EEECEEEEEECSSTTEEEEEETTT-------------------------------
T ss_pred cCCCeEEEEECCC---CcEEeecc-CCCCcceEEECCCCCEEEEEecCC-------------------------------
Q ss_pred CCccccceeccceeeeeeecCCeEEEEEEe-CCCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCC----------
Q psy4773 85 IPSEDVKHVVGHFESILFLQGTRYTLLVIS-SQGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISK---------- 151 (160)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~vd-~~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~---------- 151 (160)
+.+..+| .+|+++..+.... .+..+... +.+||+++-..+
T Consensus 325 -----------------------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 325 -----------------------SKIEVYDLKEKKVQKSIPVFD----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp -----------------------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred -----------------------CEEEEEECCCCcEEEEecCCC----CCCeEEEcCCCCEEEEEecCCCcccccccccc
Q ss_pred ----eEEEEeCCC
Q psy4773 152 ----HLARVPLAK 160 (160)
Q Consensus 152 ----~i~~~~l~~ 160 (160)
.|-++++..
T Consensus 378 ~~dg~v~~~d~~~ 390 (433)
T 3bws_A 378 LVLGKVYVIDTTT 390 (433)
T ss_dssp SSCCEEEEEETTT
T ss_pred ccceEEEEEECCC
No 114
>1s29_A LA protein; winged helix-turn-helix, autoantigen, RNA-binding, RNA binding protein; 1.60A {Trypanosoma brucei} SCOP: a.4.5.46
Probab=26.33 E-value=8.3 Score=25.84 Aligned_cols=14 Identities=36% Similarity=0.480 Sum_probs=10.7
Q ss_pred EEEEEeCCCeEEEE
Q psy4773 109 TLLVISSQGEIVDA 122 (160)
Q Consensus 109 ~vv~vd~~G~il~~ 122 (160)
..+++++||+-|+-
T Consensus 74 ~~lev~edg~~VRR 87 (92)
T 1s29_A 74 EKLVLSEDGLMVRR 87 (92)
T ss_dssp SSEEECTTSSEEEE
T ss_pred CeEEEeCCCCEEeC
Confidence 35789999987764
No 115
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=25.81 E-value=2.6e+02 Score=22.50 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=15.9
Q ss_pred CCCCCCceeecCCCC-eEEEee
Q psy4773 31 LPGLPDNVKRDSKGN-FLVSLV 51 (160)
Q Consensus 31 LPG~PDNI~~~~~G~-fWval~ 51 (160)
.+..| ++..+++|. +||+-.
T Consensus 64 vG~~P-~i~~spDg~~lyVan~ 84 (368)
T 1mda_H 64 GAFLS-LAVAGHSGSDFALAST 84 (368)
T ss_dssp ECTTC-EEEECTTSSCEEEEEE
T ss_pred CCCCC-ceEECCCCCEEEEEcc
Confidence 45678 999999985 888864
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=24.94 E-value=3.2e+02 Score=23.30 Aligned_cols=41 Identities=7% Similarity=-0.154 Sum_probs=23.4
Q ss_pred cCCCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCe-EEE
Q psy4773 5 DYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNF-LVS 49 (160)
Q Consensus 5 Et~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~f-Wva 49 (160)
+...++|..++.+. ++..--+. ....|-.+..+++|++ ||+
T Consensus 173 ~~~~~~V~viD~~t---~~v~~~i~-~g~~p~~v~~SpDGr~lyv~ 214 (567)
T 1qks_A 173 LRDAGQIALIDGST---YEIKTVLD-TGYAVHISRLSASGRYLFVI 214 (567)
T ss_dssp ETTTTEEEEEETTT---CCEEEEEE-CSSCEEEEEECTTSCEEEEE
T ss_pred eCCCCeEEEEECCC---CeEEEEEe-CCCCccceEECCCCCEEEEE
Confidence 34455677776553 32222232 4446778888888875 544
No 117
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=24.46 E-value=61 Score=27.34 Aligned_cols=44 Identities=9% Similarity=0.022 Sum_probs=28.0
Q ss_pred cEEEEEEecCCCCC-cceEec--------ccCCCCCCceeecCCCCeEEEeec
Q psy4773 9 FSFWRYYLKGPKQG-KSEVFI--------DGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 9 ~Ri~Ry~l~G~k~G-~~evfi--------d~LPG~PDNI~~~~~G~fWval~~ 52 (160)
.||+|+.+++.+.. +.+.|. +.+.|.|=.+..+++|.+||+-..
T Consensus 303 g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 303 GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSS 355 (463)
T ss_dssp SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEES
T ss_pred CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEecc
Confidence 68999999765432 333432 234567888889999999998764
No 118
>2nnc_A Sulfur covalently-binding protein; sulfur binding protein, SOXY, beta sandwich, green sulfur BA ligand binding protein; 2.14A {Chlorobium limicola} PDB: 2nnf_A
Probab=24.23 E-value=1.8e+02 Score=20.23 Aligned_cols=41 Identities=10% Similarity=-0.040 Sum_probs=28.1
Q ss_pred EEEEEEeCCCeEEEEEEcCCCCCcCceEEEEECCEEEEecC
Q psy4773 108 YTLLVISSQGEIVDALHSVDGSLKGSSDVEEYNGAYYFGSP 148 (160)
Q Consensus 108 ~~vv~vd~~G~il~~l~d~~g~~~~iS~v~e~~g~LylGS~ 148 (160)
...+.+.+.|+.--+..-.-+..+.|..+.+.||.||.++-
T Consensus 73 ~a~f~~~p~~~~~~stRirm~~ts~V~Ava~~dG~~~~a~~ 113 (124)
T 2nnc_A 73 VASFDVLPRMKPEVSLRMRMAKTENLVVVVQAGGKLYRAVR 113 (124)
T ss_dssp EEEEEECTTSCCEEEEEEECCSSEEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCceeEEEEEEeCCCccEEEEEEeCCEEEEEEE
Confidence 45556666677655555444555678888888999998864
No 119
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=23.75 E-value=2.4e+02 Score=21.29 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=25.7
Q ss_pred CCcEEEEEEecCCCCCcceEecccCCCCCCceeecCCCCeEEEeec
Q psy4773 7 CNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVC 52 (160)
Q Consensus 7 ~~~Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~fWval~~ 52 (160)
....|..|.+.. +.|+.+.....-...|-.+..+++|.+..+...
T Consensus 25 ~~~~i~~~~~d~-~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~ 69 (361)
T 3scy_A 25 NSKGIYTFRFNE-ETGESLPLSDAEVANPSYLIPSADGKFVYSVNE 69 (361)
T ss_dssp SCCEEEEEEEET-TTCCEEEEEEEECSCCCSEEECTTSSEEEEEEC
T ss_pred CCCCEEEEEEeC-CCCCEEEeecccCCCCceEEECCCCCEEEEEEc
Confidence 344566666653 335544443312346788899999985554433
No 120
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=23.28 E-value=2.3e+02 Score=20.88 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=23.0
Q ss_pred EEEEEEecCCCCCcceEecccCCCCCCceeecCCCC-eEEEe
Q psy4773 10 SFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGN-FLVSL 50 (160)
Q Consensus 10 Ri~Ry~l~G~k~G~~evfid~LPG~PDNI~~~~~G~-fWval 50 (160)
+|..+.++. |+....+. ....|..+..+++|. ++++-
T Consensus 109 ~i~v~d~~~---~~~~~~~~-~~~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 109 NMQSYSFLK---NKFISTIP-IPYDAVGIAISPNGNGLILID 146 (331)
T ss_dssp EEEEEETTT---TEEEEEEE-CCTTEEEEEECTTSSCEEEEE
T ss_pred cEEEEECCC---CCeEEEEE-CCCCccceEECCCCCEEEEEe
Confidence 677777654 33333333 455678888999987 45443
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=22.71 E-value=2.3e+02 Score=20.66 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=25.0
Q ss_pred CCCcEEEEEEecCCCCCcceEecccCCC------CCCceeecCCCC-eEEEe
Q psy4773 6 YCNFSFWRYYLKGPKQGKSEVFIDGLPG------LPDNVKRDSKGN-FLVSL 50 (160)
Q Consensus 6 t~~~Ri~Ry~l~G~k~G~~evfid~LPG------~PDNI~~~~~G~-fWval 50 (160)
....+|..+.+++ |+...-+. +++ .|.++..+++|. +|++.
T Consensus 53 ~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 53 NKSESLVKIDLVT---GETLGRID-LSTPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp TTTTEEEEEETTT---CCEEEEEE-CCBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CCCCeEEEEECCC---CCeEeeEE-cCCcccccccccceEECCCCCEEEEEe
Confidence 3456788887754 33332232 433 788899999985 45553
No 122
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=22.68 E-value=2.6e+02 Score=21.39 Aligned_cols=39 Identities=10% Similarity=0.104 Sum_probs=20.3
Q ss_pred EEEEEEecCCCCCcceEecc-cCCCCCCceeecCCCCe-EEEe
Q psy4773 10 SFWRYYLKGPKQGKSEVFID-GLPGLPDNVKRDSKGNF-LVSL 50 (160)
Q Consensus 10 Ri~Ry~l~G~k~G~~evfid-~LPG~PDNI~~~~~G~f-Wval 50 (160)
.|..|.++. .|+...... ...|.|-.+..+++|++ ++..
T Consensus 61 ~v~~~~~~~--~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~ 101 (365)
T 1jof_A 61 KWSSFAVKS--PTEIVHEASHPIGGHPRANDADTNTRAIFLLA 101 (365)
T ss_dssp EEEEEEEEE--TTEEEEEEEEECCSSGGGGCTTSCCEEEEEEE
T ss_pred eEEEEEECC--CCCEEEeeEeecCCCCccEEECCCCCEEEEEE
Confidence 456666641 233322222 12356777888888874 5433
No 123
>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1
Probab=22.05 E-value=39 Score=25.18 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=21.3
Q ss_pred ceEecc-cCCC--CCCcee---ec-CCCCeEEEeecC
Q psy4773 24 SEVFID-GLPG--LPDNVK---RD-SKGNFLVSLVCP 53 (160)
Q Consensus 24 ~evfid-~LPG--~PDNI~---~~-~~G~fWval~~~ 53 (160)
.|.+-+ |||. +|+|+. .| ++|.|||-+..+
T Consensus 55 ~elL~e~gLP~GLLP~~V~~Y~l~~~tG~f~V~l~~~ 91 (170)
T 1ydu_A 55 PELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSI 91 (170)
T ss_dssp HHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSC
T ss_pred HHHHHHcCCCCCcCCCCCeEEEEECCCcEEEEEeCCC
Confidence 344444 7884 899886 55 469999999665
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=20.46 E-value=2.8e+02 Score=20.92 Aligned_cols=39 Identities=5% Similarity=0.096 Sum_probs=17.5
Q ss_pred CCeEEEEEEcCCCCCcCceEEEEE--CCEEEEecCCCCeEEEEeC
Q psy4773 116 QGEIVDALHSVDGSLKGSSDVEEY--NGAYYFGSPISKHLARVPL 158 (160)
Q Consensus 116 ~G~il~~l~d~~g~~~~iS~v~e~--~g~LylGS~~~~~i~~~~l 158 (160)
+|+++..+.... .+..+... +.+||+++-....|.++++
T Consensus 233 ~~~~~~~~~~~~----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 233 TNKITARIPVGP----DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp TTEEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCeEEEEEecCC----CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 355555554321 23334333 3355555544455554443
No 125
>2i46_A Adrenocortical dysplasia protein homolog; TPP1, OB fold, POT1 binding, protein binding; 2.70A {Homo sapiens}
Probab=20.19 E-value=62 Score=23.45 Aligned_cols=11 Identities=27% Similarity=0.329 Sum_probs=9.5
Q ss_pred ChHHHHHHHHh
Q psy4773 68 FPNIRKFVARF 78 (160)
Q Consensus 68 ~P~lRk~i~~l 78 (160)
.||+|.++++.
T Consensus 7 rPWIreL~lg~ 17 (161)
T 2i46_A 7 RPWIRELILGS 17 (161)
T ss_dssp CCCHHHHHHSS
T ss_pred cHHHHHHHhcc
Confidence 69999999874
Done!