RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4773
         (160 letters)



>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
           (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 340

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 22/150 (14%), Positives = 38/150 (25%), Gaps = 36/150 (24%)

Query: 4   TDYCNFSFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVSLVCPVDEYTPQLLH 63
            +        Y             +     L DN+  D     L                
Sbjct: 223 AELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDL---------------- 265

Query: 64  IIGPFPNIRKFVARFLHLLEKIPSEDVKHVVGHFESILFLQGTRYTLLVISSQGEIVDAL 123
            +G  PN  +    F +  E  P  +V  +                  ++S + ++    
Sbjct: 266 WVGCHPNGMRI---FFYDAENPPGSEVLRIQ----------------DILSEEPKVTVVY 306

Query: 124 HSVDGSLKGSSDVEEYNGAYYFGSPISKHL 153
                 L+GS+    Y G    G+   K L
Sbjct: 307 AENGTVLQGSTVAAVYKGKLLIGTVFHKAL 336


>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell
           leukemia virus type 1 [TaxId: 11908]}
          Length = 84

 Score = 24.7 bits (54), Expect = 2.9
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 19/100 (19%)

Query: 59  PQLLHII-GPFPNIRKFVARFLHLLEK-IPSEDVKHVVGHFESILFLQGTRYTLLVISSQ 116
           P    I+ G       FV R    L+  +P    K  +            R +L   ++ 
Sbjct: 1   PSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPI-----------LR-SLAYSNAN 48

Query: 117 GEIVDALHSVDGSLKGSSDVEEYNGAYYFGSPISKHLARV 156
            E    L +       +S + +   A    +P  K   +V
Sbjct: 49  KECQKLLQAR---GHTNSPLGDMLRACQTWTP--KDKTKV 83


>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly
           (Drosophila melanogaster) [TaxId: 7227]}
          Length = 598

 Score = 25.5 bits (55), Expect = 3.5
 Identities = 4/18 (22%), Positives = 7/18 (38%)

Query: 62  LHIIGPFPNIRKFVARFL 79
            HI      +R  V+  +
Sbjct: 474 YHISADVEYLRYLVSFII 491


>d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 376

 Score = 25.3 bits (54), Expect = 3.8
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 10  SFWRYYLKGPKQGKSEVFIDGLPGLPDNVKRDSKGNFLVS 49
            F+  +        + +  +    LP N K   + +FL +
Sbjct: 318 DFFTKHYGTSANNDAAIEANAFVPLPSNWKAAVRASFLTA 357


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.142    0.431 

Gapped
Lambda     K      H
   0.267   0.0440    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 621,689
Number of extensions: 27495
Number of successful extensions: 64
Number of sequences better than 10.0: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 6
Length of query: 160
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 82
Effective length of database: 1,336,656
Effective search space: 109605792
Effective search space used: 109605792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.4 bits)