BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4774
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ N L VADAY+GLY+VN TG+T+ L+S T I+G K N +TV
Sbjct: 145 EPTCGRPLGIRVGPNNTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTV 204
Query: 68 DSDG-MVYWSDSSTKYKLYDGLF 89
DG +Y++DSS+K++ D LF
Sbjct: 205 TQDGRKIYFTDSSSKWQRRDFLF 227
>sp|Q803F5|APMAP_DANRE Adipocyte plasma membrane-associated protein OS=Danio rerio
GN=apmap PE=2 SV=1
Length = 415
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 6 KYEQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSV 65
++E CGRPLG++ NG L VADAY GL++VN TG+ + L+S + I G + N +
Sbjct: 143 EHEHTCGRPLGIRVGPNGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDL 202
Query: 66 TVDSDG-MVYWSDSSTKYKLYD 86
V DG VY++DSS++++ D
Sbjct: 203 DVTQDGKKVYFTDSSSRWQRRD 224
>sp|B5X3B2|APMAP_SALSA Adipocyte plasma membrane-associated protein OS=Salmo salar
GN=apmap PE=2 SV=1
Length = 416
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ NG L VADAY GL+KVN TG+ L+S + G + N + V
Sbjct: 146 EPSCGRPLGIRVGPNGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDV 205
Query: 68 DSDG-MVYWSDSSTKYKLYDGLFDGL-TSGSGSFIKIGPNTQEV 109
DG VY++DSS++++ D L + + G ++ T+EV
Sbjct: 206 TQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEV 249
>sp|Q3T0E5|APMAP_BOVIN Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP
PE=2 SV=1
Length = 412
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ NG L V DAY GL++VN + + L+S +T I+G K N +TV
Sbjct: 145 EPACGRPLGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTV 204
Query: 68 DSDG-MVYWSDSSTKYKLYDGLFDGLTSGS--GSFIKIGPNTQEV 109
DG +Y++DSS+K++ D L L G+ G ++ T+EV
Sbjct: 205 TRDGRKIYFTDSSSKWQRRDYLLL-LMEGTDDGRLLEYDTQTKEV 248
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens
GN=APMAP PE=1 SV=2
Length = 416
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ NG L VADAY GL++VN + + L+S +T I+G N +TV
Sbjct: 146 EPVCGRPLGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTV 205
Query: 68 DSDG-MVYWSDSSTKYKLYDGLF 89
DG +Y++DSS+K++ D L
Sbjct: 206 TQDGRKIYFTDSSSKWQRRDYLL 228
>sp|Q7TP48|APMAP_RAT Adipocyte plasma membrane-associated protein OS=Rattus norvegicus
GN=Apmap PE=2 SV=2
Length = 376
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ NG L V DAY GL++VN + L+S +T I+G K N +T+
Sbjct: 106 EPTCGRPLGIRVGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTI 165
Query: 68 DSDG-MVYWSDSSTKYKLYDGLF 89
DG +Y++DSS+K++ D L
Sbjct: 166 TRDGRKIYFTDSSSKWQRRDYLL 188
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus
GN=Apmap PE=1 SV=1
Length = 415
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 8 EQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV 67
E CGRPLG++ NG L V DAY GL++VN + L+S +T I+G K N +TV
Sbjct: 145 EPTCGRPLGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTV 204
Query: 68 DSDG-MVYWSDSSTKYKLYDGLF 89
DG +Y++DSS+K++ D L
Sbjct: 205 TRDGRKIYFTDSSSKWQRRDYLL 227
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 10 QCGRPLGMKF-DKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVD 68
+CGRP G+ F +K G L+VADA GL+ ++ G ++ +DG + + + VD
Sbjct: 95 RCGRPAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITD---SVDGKPFKFLDGLDVD 151
Query: 69 -SDGMVYWSDSSTKYKLYDGLFD-GLTSGSGSFIKIGPNTQEV 109
+ G+VY++ S+++ L GL +G K P+T+ V
Sbjct: 152 PTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVV 194
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 9 QQCGRPLGMKFD-KNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQI-PNSVT 66
++CGRP G+ F+ K G L+VADA GL+ + G +++ + G KP + + +
Sbjct: 96 EKCGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKI----ADSVGGKPFLFLDGLD 151
Query: 67 VD-SDGMVYWSDSSTKYKLYDGLFDGLTSGS-GSFIKIGPNTQEV 109
VD + G+VY++ S+ + D L T S G F K P+ + V
Sbjct: 152 VDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVV 196
>sp|Q8BH60|GOPC_MOUSE Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Mus musculus GN=Gopc PE=1 SV=1
Length = 463
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDT----EIDGAKPQIPNSVTVDSDG 71
G D+ G LHV DA + VN+ + ++ +++ + EI+ + V D +
Sbjct: 322 GQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAPEVDSDDEN 381
Query: 72 MVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNTQEVLQKQTDK 116
+ Y +S +Y+LY +G + SG+ K ++LQ K
Sbjct: 382 VEYEDESGHRYRLYLDELEG-SGNSGASCKDSSGEMKMLQGYNKK 425
>sp|Q07W34|HUTI_SHEFN Imidazolonepropionase OS=Shewanella frigidimarina (strain NCIMB
400) GN=hutI PE=3 SV=1
Length = 410
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 49 SMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIG 103
+MDT I GA IP + DG + W ++ +D L + G G +I G
Sbjct: 14 TMDTNIQGAYGVIPQAAIAVKDGKIAWVGPRSELPEFDVLATPVYRGKGGWITPG 68
>sp|Q25490|APLP_MANSE Apolipophorins OS=Manduca sexta PE=2 SV=1
Length = 3305
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQ---IPNSVTVD 68
G+ M D + A H + KV T ++ +D + P NSV VD
Sbjct: 1803 GKSASMVVDSSYAPH-----YSTLKVKANTPNNDKFKKLDVTVHSKNPSPDAYSNSVVVD 1857
Query: 69 SDGMVYWSDSS 79
+DG VY DSS
Sbjct: 1858 ADGRVYKIDSS 1868
>sp|A8NWP2|SIR5_COPC7 NAD-dependent protein deacylase OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_00083 PE=3 SV=2
Length = 299
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 13 RPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM 72
R +K D N A H+A A F + ++ T + +DG P+ V DG+
Sbjct: 72 REAALKADVNAA-HLALASFSIPRIRHTVAPGSSFTLITQNVDGLSPRAMKCVLQGWDGV 130
Query: 73 VYWSDSSTKYKLYDGLFD 90
D +++ LFD
Sbjct: 131 TLPEDPPYLIEMHGRLFD 148
>sp|P20007|PCKG_DROME Phosphoenolpyruvate carboxykinase [GTP] OS=Drosophila melanogaster
GN=Pepck PE=2 SV=2
Length = 647
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 17 MKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYW 75
MKFD G L + G + V T I+M+T K I +V SDG V+W
Sbjct: 341 MKFDSQGVLRAINPENGFFGVAPGTSMETNPIAMNTVF---KNTIFTNVASTSDGGVFW 396
>sp|Q9HD26|GOPC_HUMAN Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Homo sapiens GN=GOPC PE=1 SV=1
Length = 462
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDT----EIDGAKPQIPNSVTVDSDG 71
G D+ G LHV DA + VN+ + ++ +++ + EI+ + V D +
Sbjct: 321 GQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAPEVDSDDEN 380
Query: 72 MVYWSDSSTKYKLY 85
+ Y +S +Y+LY
Sbjct: 381 VEYEDESGHRYRLY 394
>sp|O05871|PKND_MYCTU Serine/threonine-protein kinase PknD OS=Mycobacterium tuberculosis
GN=pknD PE=1 SV=1
Length = 664
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 2 FDGFKYEQQCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQI 61
FDG Y P G+ D GA++VAD V + G Q + T ++
Sbjct: 506 FDGLNY------PEGLAVDTQGAVYVADRGNNRV-VKLAAGSKTQTVLPFTGLND----- 553
Query: 62 PNSVTVDSDGMVYWSDS 78
P+ V VD+ G VY +D+
Sbjct: 554 PDGVAVDNSGNVYVTDT 570
>sp|Q5RD32|GOPC_PONAB Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Pongo abelii GN=GOPC PE=2 SV=1
Length = 462
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDT----EIDGAKPQIPNSVTVDSDG 71
G D+ G LHV DA + VN+ + ++ +++ + EI+ + V D +
Sbjct: 321 GQPADRCGGLHVGDAILAVDGVNLRDTKHKEAVTVLSQQRGEIEFEVVYVAPEVDSDDEN 380
Query: 72 MVYWSDSSTKYKLY 85
+ Y +S +Y+LY
Sbjct: 381 VEYEDESGHRYRLY 394
>sp|Q44091|SNDH_ACELI L-sorbosone dehydrogenase OS=Acetobacter liquefaciens PE=4 SV=1
Length = 449
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 12 GRPLGMKFDKNGALHVAD 29
GRP+G+ DK+GAL VAD
Sbjct: 415 GRPVGLALDKSGALLVAD 432
>sp|Q8CCH2|NHLC3_MOUSE NHL repeat-containing protein 3 OS=Mus musculus GN=Nhlrc3 PE=2 SV=1
Length = 347
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 10 QCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTE--IDGAKPQIPNSVTV 67
Q P + D G +++ D GL V Q ++ + E AK IP+SVT+
Sbjct: 162 QFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVTL 221
Query: 68 DSDGMVYWSDSSTK 81
D+ G V+ +D K
Sbjct: 222 DAVGRVWVADRGNK 235
>sp|P47631|AMPA_MYCGE Probable cytosol aminopeptidase OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=pepA PE=3 SV=1
Length = 447
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG 71
GMK+D +GA V L K V T + ++ + GAK Q P+ + + +G
Sbjct: 237 GMKYDMSGAAIVCSTVLALAKNKVKT-NVVAVAALTENLPGAKAQRPDDIKIAYNG 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,949,406
Number of Sequences: 539616
Number of extensions: 1835398
Number of successful extensions: 2939
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2928
Number of HSP's gapped (non-prelim): 31
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)