Query psy4774
Match_columns 120
No_of_seqs 123 out of 1024
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 17:21:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.6 1.2E-15 4E-20 114.1 5.5 101 10-113 78-183 (322)
2 3dr2_A Exported gluconolactona 99.3 8.5E-12 2.9E-16 92.3 10.4 95 11-111 85-185 (305)
3 3e5z_A Putative gluconolactona 99.3 3.2E-11 1.1E-15 88.1 10.5 100 11-113 68-170 (296)
4 3sre_A PON1, serum paraoxonase 99.2 2.8E-11 9.6E-16 93.8 7.2 100 11-115 111-221 (355)
5 3hrp_A Uncharacterized protein 99.1 1.9E-10 6.5E-15 89.5 9.5 72 9-80 320-400 (409)
6 3g4e_A Regucalcin; six bladed 99.1 2.3E-10 7.8E-15 84.4 9.3 93 11-112 53-146 (297)
7 3fvz_A Peptidyl-glycine alpha- 99.1 7.2E-10 2.5E-14 82.8 10.6 67 8-80 20-111 (329)
8 4hw6_A Hypothetical protein, I 99.1 3.8E-10 1.3E-14 88.8 7.7 72 7-79 330-422 (433)
9 3hrp_A Uncharacterized protein 99.0 2.3E-09 8E-14 83.3 9.9 66 13-80 267-344 (409)
10 3kya_A Putative phosphatase; s 99.0 1.2E-09 4E-14 88.1 8.2 87 3-106 363-475 (496)
11 4hw6_A Hypothetical protein, I 99.0 1.3E-09 4.5E-14 85.7 8.1 70 2-79 128-201 (433)
12 3fvz_A Peptidyl-glycine alpha- 99.0 4.2E-09 1.4E-13 78.6 9.9 68 11-78 90-162 (329)
13 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 5E-09 1.7E-13 76.1 9.6 95 11-110 70-167 (314)
14 2qe8_A Uncharacterized protein 98.9 4.7E-09 1.6E-13 79.0 9.6 86 12-105 248-336 (343)
15 2qe8_A Uncharacterized protein 98.9 8.8E-09 3E-13 77.5 10.2 68 11-79 66-140 (343)
16 2fp8_A Strictosidine synthase; 98.9 4.7E-09 1.6E-13 78.0 8.5 61 11-79 125-205 (322)
17 1ijq_A LDL receptor, low-densi 98.9 1.1E-08 3.8E-13 76.7 9.7 84 10-115 162-250 (316)
18 3sov_A LRP-6, low-density lipo 98.9 8.9E-09 3.1E-13 77.9 9.0 65 9-80 119-187 (318)
19 3v64_C Agrin; beta propeller, 98.9 8.5E-09 2.9E-13 78.6 8.4 63 11-80 158-224 (349)
20 3a9g_A Putative uncharacterize 98.9 1.3E-08 4.6E-13 78.0 9.6 90 11-106 72-178 (354)
21 1ijq_A LDL receptor, low-densi 98.8 1.9E-08 6.6E-13 75.4 9.9 64 10-80 118-185 (316)
22 3tc9_A Hypothetical hydrolase; 98.8 6E-09 2E-13 81.7 6.9 81 8-105 328-429 (430)
23 1q7f_A NHL, brain tumor CG1071 98.8 2.9E-08 9.9E-13 71.7 9.3 63 11-79 120-183 (286)
24 3p5b_L Low density lipoprotein 98.8 2.7E-08 9.1E-13 77.3 9.6 63 10-79 157-222 (400)
25 3v65_B Low-density lipoprotein 98.8 2.3E-08 7.9E-13 77.2 8.8 63 11-80 201-267 (386)
26 4a0p_A LRP6, LRP-6, low-densit 98.8 2.9E-08 1E-12 81.5 9.9 61 12-79 80-143 (628)
27 3tc9_A Hypothetical hydrolase; 98.8 4E-08 1.4E-12 77.0 10.1 64 11-80 225-291 (430)
28 3sov_A LRP-6, low-density lipo 98.8 3.3E-08 1.1E-12 74.8 9.2 80 11-114 165-249 (318)
29 1rwi_B Serine/threonine-protei 98.8 3.7E-08 1.3E-12 70.2 9.1 62 12-80 150-212 (270)
30 1rwi_B Serine/threonine-protei 98.8 3.8E-08 1.3E-12 70.1 9.1 61 12-79 67-127 (270)
31 2ism_A Putative oxidoreductase 98.8 4.6E-08 1.6E-12 74.7 9.9 90 11-106 74-178 (352)
32 1q7f_A NHL, brain tumor CG1071 98.8 6.1E-08 2.1E-12 70.0 9.7 64 11-80 163-227 (286)
33 1npe_A Nidogen, entactin; glyc 98.8 3.5E-08 1.2E-12 71.3 8.4 63 11-80 121-188 (267)
34 3v64_C Agrin; beta propeller, 98.7 4.3E-08 1.5E-12 74.7 9.1 61 11-79 202-264 (349)
35 2p4o_A Hypothetical protein; p 98.7 4.5E-08 1.5E-12 72.5 8.9 75 10-106 70-147 (306)
36 2p4o_A Hypothetical protein; p 98.7 6.7E-08 2.3E-12 71.6 9.6 60 11-79 31-91 (306)
37 1npe_A Nidogen, entactin; glyc 98.7 7.1E-08 2.4E-12 69.7 9.5 61 12-79 79-142 (267)
38 3m0c_C LDL receptor, low-densi 98.7 7.6E-08 2.6E-12 81.2 10.7 64 10-80 469-535 (791)
39 3s94_A LRP-6, low-density lipo 98.7 8E-08 2.7E-12 78.8 10.5 61 12-79 84-147 (619)
40 3p5b_L Low density lipoprotein 98.7 5E-08 1.7E-12 75.7 8.8 82 11-114 245-331 (400)
41 2p9w_A MAL S 1 allergenic prot 98.7 8.6E-09 2.9E-13 79.4 3.9 68 13-80 64-157 (334)
42 2dg1_A DRP35, lactonase; beta 98.7 9.2E-08 3.2E-12 70.3 9.4 64 11-79 86-154 (333)
43 3v65_B Low-density lipoprotein 98.7 1.6E-07 5.5E-12 72.4 10.8 64 10-80 114-180 (386)
44 3s94_A LRP-6, low-density lipo 98.7 1E-07 3.6E-12 78.1 9.9 63 11-80 391-456 (619)
45 2z2n_A Virginiamycin B lyase; 98.7 1.8E-07 6.3E-12 66.9 10.1 62 11-79 182-244 (299)
46 2qc5_A Streptogramin B lactona 98.7 2.3E-07 7.8E-12 66.4 10.5 63 11-80 145-208 (300)
47 3kya_A Putative phosphatase; s 98.7 1.1E-07 3.8E-12 76.6 9.6 86 11-112 309-417 (496)
48 2qc5_A Streptogramin B lactona 98.7 2.4E-07 8.1E-12 66.3 10.5 62 11-79 19-81 (300)
49 2z2n_A Virginiamycin B lyase; 98.6 3.2E-07 1.1E-11 65.7 10.5 62 11-79 14-76 (299)
50 1n7d_A LDL receptor, low-densi 98.6 1.8E-07 6.3E-12 77.5 9.8 81 11-113 539-624 (699)
51 4a0p_A LRP6, LRP-6, low-densit 98.6 1.6E-07 5.6E-12 77.1 9.3 63 10-80 121-187 (628)
52 3g4e_A Regucalcin; six bladed 98.6 2.1E-07 7.1E-12 68.4 8.6 64 11-79 148-218 (297)
53 2ghs_A AGR_C_1268P; regucalcin 98.6 1.5E-07 5.2E-12 70.3 8.0 64 12-79 90-153 (326)
54 1n7d_A LDL receptor, low-densi 98.6 1.2E-07 4E-12 78.7 7.9 63 11-80 495-561 (699)
55 3m0c_C LDL receptor, low-densi 98.6 2.7E-07 9.4E-12 77.8 9.6 82 11-114 557-643 (791)
56 4a9v_A PHOX; hydrolase, beta-p 98.5 6.9E-07 2.4E-11 73.2 10.4 98 11-113 383-527 (592)
57 2ism_A Putative oxidoreductase 98.5 4.7E-07 1.6E-11 69.1 8.4 65 11-79 30-98 (352)
58 3e5z_A Putative gluconolactona 98.4 1.1E-06 3.7E-11 63.9 8.9 61 10-79 26-88 (296)
59 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 5.2E-07 1.8E-11 65.4 6.9 72 12-106 226-299 (314)
60 2p9w_A MAL S 1 allergenic prot 98.4 1.7E-06 5.9E-11 66.6 9.2 65 12-78 137-204 (334)
61 3sre_A PON1, serum paraoxonase 98.4 4.6E-07 1.6E-11 70.1 5.7 62 9-80 162-242 (355)
62 2dg1_A DRP35, lactonase; beta 98.4 4.4E-06 1.5E-10 61.3 10.6 62 11-79 44-106 (333)
63 3dsm_A Uncharacterized protein 98.4 9.6E-07 3.3E-11 66.0 7.1 77 11-106 224-302 (328)
64 3dr2_A Exported gluconolactona 98.3 3.1E-06 1.1E-10 62.2 9.3 60 11-79 44-105 (305)
65 3das_A Putative oxidoreductase 98.3 3.7E-06 1.3E-10 64.9 9.5 68 10-78 30-102 (347)
66 3no2_A Uncharacterized protein 98.3 8.3E-06 2.8E-10 60.0 10.7 69 11-80 164-233 (276)
67 2g8s_A Glucose/sorbosone dehyd 98.2 6.2E-06 2.1E-10 62.9 8.7 89 12-106 66-173 (353)
68 1cru_A Protein (soluble quinop 98.1 9.4E-06 3.2E-10 64.2 8.9 92 12-106 77-206 (454)
69 3dsm_A Uncharacterized protein 98.1 1.5E-05 5.1E-10 59.4 9.2 65 11-78 83-148 (328)
70 3das_A Putative oxidoreductase 98.1 1.5E-05 5.1E-10 61.4 9.5 90 11-106 79-183 (347)
71 2ghs_A AGR_C_1268P; regucalcin 98.1 1.9E-05 6.6E-10 58.8 9.8 63 12-79 179-249 (326)
72 3a9g_A Putative uncharacterize 98.1 3.8E-06 1.3E-10 64.3 6.0 66 10-79 27-96 (354)
73 1cru_A Protein (soluble quinop 98.1 1.2E-05 4.2E-10 63.6 8.4 70 10-79 25-100 (454)
74 3qqz_A Putative uncharacterize 98.1 2E-05 6.7E-10 58.4 8.9 67 12-79 173-243 (255)
75 2iwa_A Glutamine cyclotransfer 97.9 8.5E-05 2.9E-09 55.3 9.5 61 12-79 21-84 (266)
76 3vgz_A Uncharacterized protein 97.9 0.00013 4.5E-09 53.0 10.2 68 11-78 88-160 (353)
77 4a9v_A PHOX; hydrolase, beta-p 97.9 2.6E-05 8.8E-10 64.0 6.9 64 9-78 473-550 (592)
78 3u4y_A Uncharacterized protein 97.8 0.0003 1E-08 50.9 11.5 70 10-79 219-293 (331)
79 3hfq_A Uncharacterized protein 97.8 0.00018 6.1E-09 52.8 9.6 65 12-80 141-208 (347)
80 3vgz_A Uncharacterized protein 97.8 0.00017 5.8E-09 52.4 9.4 66 11-79 184-251 (353)
81 2iwa_A Glutamine cyclotransfer 97.8 8E-05 2.7E-09 55.4 7.7 63 13-79 108-170 (266)
82 2g8s_A Glucose/sorbosone dehyd 97.8 2.6E-05 9E-10 59.4 5.1 67 11-79 17-89 (353)
83 3c75_H MADH, methylamine dehyd 97.7 0.00016 5.5E-09 57.0 8.7 65 9-78 116-196 (426)
84 3scy_A Hypothetical bacterial 97.7 0.00042 1.4E-08 51.2 10.5 62 12-79 259-326 (361)
85 3nol_A Glutamine cyclotransfer 97.7 0.00017 5.8E-09 53.7 8.2 64 12-79 127-190 (262)
86 3u4y_A Uncharacterized protein 97.7 0.00042 1.4E-08 50.2 10.2 63 11-79 175-241 (331)
87 3scy_A Hypothetical bacterial 97.7 0.00039 1.3E-08 51.4 10.0 68 10-79 209-279 (361)
88 3hfq_A Uncharacterized protein 97.7 0.00017 5.7E-09 53.0 7.6 65 10-79 38-106 (347)
89 3nok_A Glutaminyl cyclase; bet 97.6 0.00022 7.4E-09 53.3 8.2 65 11-79 135-199 (268)
90 3q6k_A 43.2 kDa salivary prote 97.6 0.0004 1.4E-08 54.2 9.7 80 13-102 276-365 (381)
91 1tl2_A L10, protein (tachylect 97.5 9E-05 3.1E-09 54.4 4.4 63 13-76 42-104 (236)
92 3mbr_X Glutamine cyclotransfer 97.5 0.00061 2.1E-08 50.1 8.6 65 11-79 104-168 (243)
93 3v9f_A Two-component system se 97.4 0.00068 2.3E-08 55.9 9.3 64 12-79 495-558 (781)
94 3q6k_A 43.2 kDa salivary prote 97.4 0.00088 3E-08 52.3 9.1 69 11-80 86-180 (381)
95 3hxj_A Pyrrolo-quinoline quino 97.4 0.0017 5.6E-08 46.9 10.0 60 12-79 215-274 (330)
96 1mda_H Methylamine dehydrogena 97.4 0.00054 1.8E-08 52.9 7.6 65 9-78 63-143 (368)
97 3nol_A Glutamine cyclotransfer 97.3 0.00053 1.8E-08 51.0 6.9 67 13-80 173-246 (262)
98 3no2_A Uncharacterized protein 97.3 0.0023 7.7E-08 46.8 10.2 60 12-80 125-185 (276)
99 4a2l_A BT_4663, two-component 97.3 0.0014 4.8E-08 54.1 10.1 62 13-79 544-605 (795)
100 1jmx_B Amine dehydrogenase; ox 97.3 0.0019 6.3E-08 46.6 9.1 60 14-79 2-63 (349)
101 2mad_H Methylamine dehydrogena 97.3 0.0029 1E-07 48.3 10.6 64 10-78 65-144 (373)
102 1ri6_A Putative isomerase YBHE 97.2 0.0039 1.3E-07 44.7 10.5 64 10-79 36-104 (343)
103 1pby_B Quinohemoprotein amine 97.2 0.0034 1.2E-07 44.9 10.1 63 13-77 35-100 (337)
104 3nok_A Glutaminyl cyclase; bet 97.2 0.0007 2.4E-08 50.5 6.5 67 13-80 182-256 (268)
105 2wg3_C Hedgehog-interacting pr 97.2 0.00079 2.7E-08 53.5 6.9 92 12-106 69-186 (463)
106 1jof_A Carboxy-CIS,CIS-muconat 97.2 0.0023 7.8E-08 47.7 8.9 66 11-79 144-213 (365)
107 3v9f_A Two-component system se 97.1 0.0018 6.1E-08 53.4 8.5 63 13-80 540-603 (781)
108 3mbr_X Glutamine cyclotransfer 97.1 0.0014 4.9E-08 48.1 6.6 67 13-80 151-225 (243)
109 3sjl_D Methylamine dehydrogena 97.0 0.0042 1.4E-07 48.4 9.4 66 9-78 76-156 (386)
110 2oiz_A Aromatic amine dehydrog 97.0 0.0021 7.2E-08 48.4 7.4 63 11-78 50-127 (361)
111 2mad_H Methylamine dehydrogena 97.0 0.0085 2.9E-07 45.7 10.3 70 13-106 265-350 (373)
112 1ri6_A Putative isomerase YBHE 96.9 0.0096 3.3E-07 42.6 10.0 61 13-79 232-297 (343)
113 3hxj_A Pyrrolo-quinoline quino 96.8 0.013 4.6E-07 42.1 9.9 55 14-78 179-233 (330)
114 1pby_B Quinohemoprotein amine 96.7 0.018 6.1E-07 41.0 10.0 57 13-77 83-153 (337)
115 4a2l_A BT_4663, two-component 96.6 0.0098 3.4E-07 49.0 8.9 64 13-79 407-471 (795)
116 1l0q_A Surface layer protein; 96.6 0.024 8.2E-07 41.7 10.0 61 11-79 73-136 (391)
117 1l0q_A Surface layer protein; 96.5 0.017 5.8E-07 42.5 9.1 60 12-79 32-94 (391)
118 3ott_A Two-component system se 96.5 0.011 3.8E-07 48.4 8.3 61 14-79 474-536 (758)
119 1jmx_B Amine dehydrogenase; ox 96.5 0.021 7.1E-07 41.0 8.9 64 13-77 44-110 (349)
120 3bws_A Protein LP49; two-domai 96.4 0.0068 2.3E-07 45.3 6.3 67 11-79 122-189 (433)
121 3zwu_A Alkaline phosphatase PH 96.4 0.031 1.1E-06 45.9 10.3 71 9-79 381-496 (592)
122 3zwu_A Alkaline phosphatase PH 96.3 0.0099 3.4E-07 48.8 7.2 62 9-76 473-548 (592)
123 2wg3_C Hedgehog-interacting pr 96.3 0.02 6.7E-07 45.4 8.6 85 12-105 276-373 (463)
124 3qqz_A Putative uncharacterize 96.2 0.025 8.5E-07 41.5 8.2 61 12-79 27-89 (255)
125 2ece_A 462AA long hypothetical 96.2 0.023 7.7E-07 45.4 8.4 67 11-79 320-401 (462)
126 1mda_H Methylamine dehydrogena 96.2 0.011 3.9E-07 45.4 6.5 59 12-78 261-333 (368)
127 2ojh_A Uncharacterized protein 96.2 0.07 2.4E-06 36.8 10.1 59 12-76 42-101 (297)
128 3amr_A 3-phytase; beta-propell 96.1 0.017 5.8E-07 44.6 7.2 68 9-80 177-253 (355)
129 2oiz_A Aromatic amine dehydrog 96.1 0.01 3.5E-07 44.6 5.8 53 14-72 307-360 (361)
130 1jof_A Carboxy-CIS,CIS-muconat 96.0 0.02 6.8E-07 42.5 7.0 69 11-79 192-275 (365)
131 3bws_A Protein LP49; two-domai 96.0 0.065 2.2E-06 39.9 9.7 60 12-79 303-365 (433)
132 3ott_A Two-component system se 95.8 0.011 3.9E-07 48.4 5.3 62 12-80 517-578 (758)
133 3c75_H MADH, methylamine dehyd 95.8 0.023 7.9E-07 44.6 6.8 64 11-78 176-246 (426)
134 3sjl_D Methylamine dehydrogena 95.4 0.042 1.4E-06 42.7 6.8 65 11-79 136-207 (386)
135 3azo_A Aminopeptidase; POP fam 95.2 0.24 8E-06 39.3 10.9 67 12-79 242-313 (662)
136 1tl2_A L10, protein (tachylect 95.2 0.018 6.1E-07 42.2 4.0 61 15-77 91-152 (236)
137 2ece_A 462AA long hypothetical 95.0 0.047 1.6E-06 43.6 6.1 62 12-78 138-206 (462)
138 1nir_A Nitrite reductase; hemo 94.7 0.28 9.5E-06 39.0 10.0 62 11-78 323-389 (543)
139 1qks_A Cytochrome CD1 nitrite 94.6 0.16 5.5E-06 41.0 8.4 62 10-79 195-264 (567)
140 3iz6_a 40S ribosomal protein R 94.5 0.96 3.3E-05 33.4 12.0 68 12-79 250-318 (380)
141 4h5i_A Guanine nucleotide-exch 94.1 0.27 9.3E-06 36.5 8.3 60 14-79 272-332 (365)
142 2z3z_A Dipeptidyl aminopeptida 94.1 0.53 1.8E-05 37.5 10.4 62 14-78 260-330 (706)
143 1nir_A Nitrite reductase; hemo 94.0 0.24 8.1E-06 39.4 8.1 58 13-78 180-245 (543)
144 2hqs_A Protein TOLB; TOLB, PAL 93.6 0.81 2.8E-05 34.6 10.2 59 12-78 179-242 (415)
145 3s25_A Hypothetical 7-bladed b 93.5 0.15 5.1E-06 37.9 5.8 53 17-80 150-205 (302)
146 2hqs_A Protein TOLB; TOLB, PAL 93.0 1.2 4E-05 33.7 10.2 58 12-77 223-285 (415)
147 1fwx_A Nitrous oxide reductase 92.8 0.076 2.6E-06 43.6 3.4 65 9-79 274-350 (595)
148 3o4h_A Acylamino-acid-releasin 92.8 0.25 8.7E-06 38.7 6.4 53 15-75 153-210 (582)
149 2ojh_A Uncharacterized protein 92.5 1.2 4.1E-05 30.4 9.0 57 14-78 131-192 (297)
150 2z3z_A Dipeptidyl aminopeptida 92.4 0.59 2E-05 37.3 8.2 61 12-77 181-276 (706)
151 3iz6_a 40S ribosomal protein R 92.3 2.3 7.8E-05 31.3 10.9 63 14-79 301-364 (380)
152 1qks_A Cytochrome CD1 nitrite 92.3 0.62 2.1E-05 37.5 8.2 60 12-79 154-217 (567)
153 2ecf_A Dipeptidyl peptidase IV 92.1 0.83 2.8E-05 36.6 8.8 62 14-79 289-356 (741)
154 3c5m_A Oligogalacturonate lyas 92.1 1.1 3.9E-05 32.3 8.8 76 17-106 287-384 (396)
155 3azo_A Aminopeptidase; POP fam 92.0 0.9 3.1E-05 35.9 8.8 61 12-79 188-261 (662)
156 3pe7_A Oligogalacturonate lyas 91.8 1.3 4.4E-05 32.2 8.8 55 17-78 41-100 (388)
157 3ow8_A WD repeat-containing pr 91.6 2.8 9.5E-05 30.3 10.5 61 12-79 165-226 (321)
158 3s25_A Hypothetical 7-bladed b 91.6 0.33 1.1E-05 36.0 5.4 51 16-78 108-164 (302)
159 3q7m_A Lipoprotein YFGL, BAMB; 91.5 1.5 5E-05 32.2 9.0 23 22-44 239-261 (376)
160 3amr_A 3-phytase; beta-propell 91.2 1.9 6.5E-05 33.2 9.5 62 12-79 128-200 (355)
161 1gxr_A ESG1, transducin-like e 91.1 1.9 6.3E-05 30.2 8.9 60 12-79 225-285 (337)
162 2ecf_A Dipeptidyl peptidase IV 90.9 1.6 5.5E-05 34.9 9.3 68 11-78 36-128 (741)
163 3q7m_A Lipoprotein YFGL, BAMB; 90.4 1.1 3.8E-05 32.9 7.4 11 96-106 318-328 (376)
164 1got_B GT-beta; complex (GTP-b 90.2 3.5 0.00012 29.7 9.9 63 12-79 227-290 (340)
165 3c5m_A Oligogalacturonate lyas 90.2 2.4 8.2E-05 30.6 9.0 58 14-78 38-100 (396)
166 3odt_A Protein DOA1; ubiquitin 90.2 2.6 9E-05 29.1 8.9 60 12-78 226-285 (313)
167 3zwl_B Eukaryotic translation 90.1 3.3 0.00011 29.2 9.6 61 12-79 33-94 (369)
168 3lrv_A PRE-mRNA-splicing facto 90.1 3.9 0.00013 29.4 10.0 62 12-79 126-190 (343)
169 1gxr_A ESG1, transducin-like e 90.1 2.2 7.5E-05 29.8 8.5 62 12-78 98-160 (337)
170 3pe7_A Oligogalacturonate lyas 89.9 0.91 3.1E-05 33.0 6.5 65 14-78 292-370 (388)
171 3vu4_A KMHSV2; beta-propeller 89.3 4.4 0.00015 29.6 9.9 63 12-79 196-260 (355)
172 1fwx_A Nitrous oxide reductase 89.3 0.36 1.2E-05 39.7 4.2 70 9-80 328-409 (595)
173 4a5s_A Dipeptidyl peptidase 4 89.1 2.2 7.6E-05 34.6 8.8 55 14-72 19-74 (740)
174 4e54_B DNA damage-binding prot 88.7 6.1 0.00021 29.5 10.9 63 12-79 165-229 (435)
175 3k26_A Polycomb protein EED; W 88.4 5.1 0.00017 28.2 9.6 65 11-79 115-181 (366)
176 1got_B GT-beta; complex (GTP-b 88.3 5 0.00017 28.9 9.6 61 12-79 185-246 (340)
177 2aq5_A Coronin-1A; WD40 repeat 87.9 5.7 0.00019 29.1 9.7 61 12-77 177-238 (402)
178 1erj_A Transcriptional repress 87.7 5.5 0.00019 29.4 9.6 68 12-79 65-143 (393)
179 1k8k_C P40, ARP2/3 complex 41 87.4 4.4 0.00015 28.8 8.6 63 12-79 9-72 (372)
180 1xfd_A DIP, dipeptidyl aminope 87.3 1.8 6.3E-05 34.4 7.1 61 12-76 17-78 (723)
181 3o4h_A Acylamino-acid-releasin 87.2 2.3 7.9E-05 33.1 7.5 49 17-75 115-165 (582)
182 3vl1_A 26S proteasome regulato 86.5 5.2 0.00018 29.1 8.8 62 12-79 248-311 (420)
183 4h5i_A Guanine nucleotide-exch 86.4 2.4 8.1E-05 31.3 6.9 62 12-78 177-238 (365)
184 1nr0_A Actin interacting prote 86.3 3.6 0.00012 32.5 8.3 62 11-79 18-79 (611)
185 1erj_A Transcriptional repress 86.3 5.9 0.0002 29.2 9.1 59 14-79 126-185 (393)
186 4ery_A WD repeat-containing pr 86.2 6.9 0.00023 27.4 9.8 61 12-79 24-85 (312)
187 3ow8_A WD repeat-containing pr 86.1 7.6 0.00026 27.9 11.2 61 12-79 207-268 (321)
188 1sq9_A Antiviral protein SKI8; 85.3 5.2 0.00018 28.8 8.2 68 11-79 233-311 (397)
189 1xfd_A DIP, dipeptidyl aminope 85.1 4.4 0.00015 32.1 8.3 59 14-77 63-132 (723)
190 2ymu_A WD-40 repeat protein; u 84.8 7.5 0.00026 29.7 9.3 60 12-79 468-528 (577)
191 2aq5_A Coronin-1A; WD40 repeat 84.5 7.6 0.00026 28.4 8.9 62 12-78 132-195 (402)
192 1k32_A Tricorn protease; prote 84.5 2.8 9.7E-05 35.5 7.2 66 13-79 54-126 (1045)
193 1sq9_A Antiviral protein SKI8; 84.4 9.3 0.00032 27.4 9.2 65 11-79 186-253 (397)
194 1pgu_A Actin interacting prote 84.4 7.3 0.00025 29.7 9.0 63 11-79 488-561 (615)
195 2ymu_A WD-40 repeat protein; u 84.4 7.4 0.00025 29.7 9.1 60 12-79 17-77 (577)
196 2gop_A Trilobed protease; beta 84.3 3.5 0.00012 29.4 6.8 54 14-78 106-188 (347)
197 3mmy_A MRNA export factor; mRN 84.2 3.4 0.00012 29.1 6.6 62 13-81 275-337 (368)
198 2pm9_A Protein WEB1, protein t 84.1 9.9 0.00034 27.4 9.8 61 12-79 263-326 (416)
199 4ggc_A P55CDC, cell division c 84.0 8.4 0.00029 26.6 9.2 59 15-79 29-87 (318)
200 1r5m_A SIR4-interacting protei 83.8 9.9 0.00034 27.2 9.4 65 12-79 46-128 (425)
201 3odt_A Protein DOA1; ubiquitin 83.7 8.5 0.00029 26.4 9.0 61 11-78 184-244 (313)
202 1pgu_A Actin interacting prote 83.5 7 0.00024 29.9 8.6 62 10-79 17-86 (615)
203 1k8k_C P40, ARP2/3 complex 41 83.5 5 0.00017 28.5 7.3 62 12-78 53-115 (372)
204 3fm0_A Protein CIAO1; WDR39,SG 83.4 7.4 0.00025 28.1 8.3 62 13-79 63-125 (345)
205 3vl1_A 26S proteasome regulato 83.2 6.9 0.00024 28.4 8.2 61 12-79 140-201 (420)
206 3mmy_A MRNA export factor; mRN 83.0 9.9 0.00034 26.6 9.1 59 12-78 87-148 (368)
207 2ynn_A Coatomer subunit beta'; 82.9 7.2 0.00025 27.5 8.0 61 12-79 14-75 (304)
208 4gqb_B Methylosome protein 50; 82.9 3.9 0.00013 30.0 6.7 62 15-79 86-147 (344)
209 3fm0_A Protein CIAO1; WDR39,SG 82.8 4.3 0.00015 29.4 6.8 63 13-79 18-81 (345)
210 3zwl_B Eukaryotic translation 82.7 9 0.00031 26.9 8.4 60 13-79 177-238 (369)
211 4g56_B MGC81050 protein; prote 82.3 2.5 8.5E-05 31.0 5.4 63 14-79 97-159 (357)
212 4aez_A CDC20, WD repeat-contai 82.2 12 0.00041 27.4 9.2 63 12-79 304-369 (401)
213 3mkq_A Coatomer beta'-subunit; 82.0 6.4 0.00022 31.5 8.1 61 11-78 13-74 (814)
214 3k26_A Polycomb protein EED; W 81.9 9.1 0.00031 26.8 8.2 63 13-79 287-355 (366)
215 4ery_A WD repeat-containing pr 81.9 11 0.00037 26.3 9.6 61 13-79 151-212 (312)
216 1r5m_A SIR4-interacting protei 81.7 10 0.00035 27.2 8.5 60 12-79 290-350 (425)
217 2pbi_B Guanine nucleotide-bind 81.7 13 0.00044 27.0 10.3 63 12-79 241-304 (354)
218 1k3i_A Galactose oxidase precu 81.4 4.5 0.00015 32.5 7.0 62 13-78 187-261 (656)
219 1nr0_A Actin interacting prote 81.2 14 0.00047 29.1 9.7 67 12-79 191-259 (611)
220 4a5s_A Dipeptidyl peptidase 4 80.9 3.7 0.00013 33.3 6.3 54 16-72 264-331 (740)
221 1vyh_C Platelet-activating fac 80.2 5.4 0.00019 29.7 6.7 60 13-79 110-170 (410)
222 3lrv_A PRE-mRNA-splicing facto 79.9 7 0.00024 28.0 7.0 59 13-78 172-233 (343)
223 2gop_A Trilobed protease; beta 79.7 3.7 0.00013 29.2 5.5 56 13-77 60-122 (347)
224 4gqb_B Methylosome protein 50; 79.5 15 0.0005 26.8 8.8 60 12-78 128-189 (344)
225 1yfq_A Cell cycle arrest prote 79.4 6.7 0.00023 27.5 6.7 60 11-78 11-76 (342)
226 3dwl_C Actin-related protein 2 79.3 3.3 0.00011 29.8 5.2 63 12-79 12-75 (377)
227 1k32_A Tricorn protease; prote 79.3 9.7 0.00033 32.2 8.6 58 12-76 379-438 (1045)
228 2vdu_B TRNA (guanine-N(7)-)-me 79.2 7.5 0.00026 29.1 7.2 60 13-77 104-167 (450)
229 3ei3_B DNA damage-binding prot 78.8 15 0.00052 26.3 8.7 63 12-79 119-183 (383)
230 4e54_B DNA damage-binding prot 78.4 18 0.00063 26.8 9.4 62 13-79 121-185 (435)
231 3ei3_B DNA damage-binding prot 78.3 11 0.00039 27.0 7.8 60 12-79 164-225 (383)
232 1flg_A Protein (quinoprotein e 78.2 12 0.0004 30.0 8.5 23 22-44 68-90 (582)
233 1k3i_A Galactose oxidase precu 77.6 26 0.00087 28.1 10.7 59 14-78 245-305 (656)
234 3jrp_A Fusion protein of prote 77.6 13 0.00044 26.2 7.8 62 12-78 207-275 (379)
235 4g56_B MGC81050 protein; prote 77.3 13 0.00043 27.1 7.9 60 12-78 140-201 (357)
236 3frx_A Guanine nucleotide-bind 76.6 15 0.0005 26.1 7.9 66 12-79 238-306 (319)
237 2pm9_A Protein WEB1, protein t 75.9 19 0.00066 25.8 9.4 65 11-79 165-235 (416)
238 4aow_A Guanine nucleotide-bind 75.5 17 0.00057 25.3 7.9 66 14-79 259-326 (340)
239 3b7f_A Glycosyl hydrolase, BNR 75.3 11 0.00037 28.0 7.1 63 16-78 119-197 (394)
240 4gga_A P55CDC, cell division c 74.0 24 0.00081 26.0 9.1 58 16-79 110-167 (420)
241 2ad6_A Methanol dehydrogenase 73.7 20 0.00068 28.5 8.6 30 15-45 109-138 (571)
242 3sfz_A APAF-1, apoptotic pepti 73.1 28 0.00096 29.5 9.8 61 12-79 616-677 (1249)
243 3b7f_A Glycosyl hydrolase, BNR 73.0 17 0.00059 26.9 7.7 64 12-76 55-134 (394)
244 1w6s_A Methanol dehydrogenase 72.9 19 0.00065 29.1 8.4 23 22-44 62-86 (599)
245 1kb0_A Quinohemoprotein alcoho 72.9 9.4 0.00032 31.1 6.6 23 22-44 77-99 (677)
246 2hz6_A Endoplasmic reticulum t 72.0 13 0.00044 27.6 6.8 28 17-45 5-32 (369)
247 1kv9_A Type II quinohemoprotei 71.9 11 0.00039 30.5 6.9 23 22-44 66-88 (668)
248 3i2n_A WD repeat-containing pr 71.6 21 0.0007 24.9 7.6 52 19-78 176-231 (357)
249 2xyi_A Probable histone-bindin 71.5 17 0.00059 27.0 7.5 66 12-79 182-252 (430)
250 3i2n_A WD repeat-containing pr 71.2 10 0.00035 26.5 5.9 26 18-43 124-150 (357)
251 1yfq_A Cell cycle arrest prote 71.2 17 0.00057 25.4 7.0 68 12-79 194-271 (342)
252 1z68_A Fibroblast activation p 71.2 9 0.00031 30.5 6.1 61 12-76 16-77 (719)
253 1kv9_A Type II quinohemoprotei 71.1 25 0.00085 28.5 8.8 31 14-45 110-140 (668)
254 1kb0_A Quinohemoprotein alcoho 70.8 26 0.00088 28.5 8.8 30 15-45 122-151 (677)
255 3frx_A Guanine nucleotide-bind 70.7 25 0.00086 24.8 9.5 60 13-79 67-127 (319)
256 2xzm_R RACK1; ribosome, transl 70.4 26 0.0009 24.9 8.7 59 14-79 79-138 (343)
257 1vyh_C Platelet-activating fac 69.9 31 0.001 25.5 8.9 61 12-79 193-254 (410)
258 3f3f_A Nucleoporin SEH1; struc 69.5 24 0.00082 24.1 7.7 63 12-79 12-79 (351)
259 2ad6_A Methanol dehydrogenase 68.8 22 0.00076 28.2 7.9 23 22-44 62-86 (571)
260 2ynn_A Coatomer subunit beta'; 68.8 23 0.00078 24.8 7.3 59 14-79 58-117 (304)
261 1yiq_A Quinohemoprotein alcoho 68.1 32 0.0011 27.9 8.9 30 15-45 115-144 (689)
262 3dw8_B Serine/threonine-protei 67.8 32 0.0011 24.9 9.0 67 11-79 177-247 (447)
263 2vdu_B TRNA (guanine-N(7)-)-me 67.4 31 0.0011 25.6 8.1 60 12-79 196-260 (450)
264 3dm0_A Maltose-binding peripla 67.3 31 0.0011 27.3 8.5 68 12-79 603-682 (694)
265 3sfz_A APAF-1, apoptotic pepti 67.3 45 0.0015 28.2 9.8 61 13-79 800-860 (1249)
266 2xbg_A YCF48-like protein; pho 67.2 32 0.0011 24.9 8.0 15 16-30 254-268 (327)
267 2xzm_R RACK1; ribosome, transl 67.1 17 0.0006 25.9 6.5 68 12-79 256-329 (343)
268 3hx6_A Type 4 fimbrial biogene 65.5 30 0.001 28.3 8.0 52 33-106 224-284 (570)
269 3jrp_A Fusion protein of prote 65.0 33 0.0011 24.0 8.4 63 12-79 56-123 (379)
270 2be1_A Serine/threonine-protei 64.3 15 0.00052 27.7 5.8 22 23-44 11-32 (339)
271 2oit_A Nucleoporin 214KDA; NH2 64.2 28 0.00095 26.3 7.4 61 11-78 149-211 (434)
272 3dwl_C Actin-related protein 2 64.0 15 0.0005 26.3 5.5 61 12-79 101-166 (377)
273 2xbg_A YCF48-like protein; pho 63.0 29 0.00098 25.1 7.0 56 14-76 165-221 (327)
274 3elq_A Arylsulfate sulfotransf 62.7 61 0.0021 26.4 10.8 66 14-80 357-453 (571)
275 3mkq_A Coatomer beta'-subunit; 62.7 56 0.0019 25.9 10.2 61 12-79 185-248 (814)
276 2xyi_A Probable histone-bindin 62.0 45 0.0015 24.6 8.3 60 12-79 232-298 (430)
277 2xn4_A Kelch-like protein 2; s 62.0 38 0.0013 23.7 8.5 72 22-111 204-283 (302)
278 3dm0_A Maltose-binding peripla 61.7 50 0.0017 26.1 8.7 61 12-79 431-492 (694)
279 1yiq_A Quinohemoprotein alcoho 61.5 23 0.00078 28.9 6.7 23 22-44 70-92 (689)
280 1z68_A Fibroblast activation p 61.3 29 0.00099 27.5 7.2 59 12-75 110-185 (719)
281 3dw8_B Serine/threonine-protei 60.4 45 0.0016 24.1 11.0 32 16-47 347-379 (447)
282 3bg1_A Protein SEC13 homolog; 59.8 27 0.00094 24.6 6.3 31 13-43 15-46 (316)
283 3jro_A Fusion protein of prote 58.8 26 0.0009 28.4 6.7 66 12-79 205-274 (753)
284 2pbi_B Guanine nucleotide-bind 58.8 48 0.0016 23.8 10.6 61 12-79 65-126 (354)
285 2xdw_A Prolyl endopeptidase; a 58.6 32 0.0011 27.5 7.1 57 15-79 339-400 (710)
286 2pm7_B Protein transport prote 58.3 33 0.0011 23.8 6.5 28 13-40 11-39 (297)
287 2hes_X YDR267CP; beta-propelle 58.3 27 0.00093 24.8 6.1 63 12-79 108-173 (330)
288 4aez_A CDC20, WD repeat-contai 58.3 50 0.0017 23.9 11.1 61 11-78 217-279 (401)
289 1w6s_A Methanol dehydrogenase 58.0 64 0.0022 26.0 8.8 32 14-45 108-144 (599)
290 2w18_A PALB2, fancn, partner a 58.0 29 0.001 26.5 6.4 52 22-78 192-245 (356)
291 2j04_B YDR362CP, TAU91; beta p 56.0 26 0.00089 27.5 6.0 58 14-79 358-417 (524)
292 3gre_A Serine/threonine-protei 55.0 58 0.002 23.7 8.2 56 19-79 178-234 (437)
293 3jro_A Fusion protein of prote 54.8 60 0.0021 26.3 8.2 63 12-79 54-121 (753)
294 2cn3_A Xyloglucanase, beta-1,4 54.0 36 0.0012 27.9 6.8 64 12-78 23-92 (737)
295 2hes_X YDR267CP; beta-propelle 51.9 60 0.0021 22.9 7.7 65 12-79 251-317 (330)
296 3gre_A Serine/threonine-protei 51.5 38 0.0013 24.7 6.1 33 12-44 215-248 (437)
297 2xdw_A Prolyl endopeptidase; a 50.9 26 0.00089 28.0 5.4 55 15-77 128-189 (710)
298 2j04_A TAU60, YPL007P, hypothe 49.6 78 0.0027 25.8 7.9 54 14-71 132-194 (588)
299 1s1d_A Apyrase; adpase, five-b 49.4 50 0.0017 25.1 6.3 80 22-106 104-194 (331)
300 4aow_A Guanine nucleotide-bind 48.8 62 0.0021 22.2 8.9 33 12-44 216-249 (340)
301 2bkl_A Prolyl endopeptidase; m 46.0 87 0.003 24.9 7.7 35 15-49 230-269 (695)
302 1yr2_A Prolyl oligopeptidase; 43.5 40 0.0014 27.2 5.4 56 16-79 368-427 (741)
303 2j04_A TAU60, YPL007P, hypothe 42.9 66 0.0022 26.3 6.5 61 12-79 86-149 (588)
304 2be1_A Serine/threonine-protei 42.3 24 0.00082 26.6 3.7 9 34-42 69-77 (339)
305 3v7d_B Cell division control p 41.1 1E+02 0.0035 22.5 7.6 54 19-79 276-330 (464)
306 2vpj_A Kelch-like protein 12; 40.4 89 0.0031 21.6 8.2 67 22-106 206-278 (301)
307 2oaj_A Protein SNI1; WD40 repe 40.3 1.6E+02 0.0055 24.6 8.8 67 12-79 152-231 (902)
308 3sbq_A Nitrous-oxide reductase 39.5 56 0.0019 27.1 5.6 64 9-78 320-396 (638)
309 4asc_A Kelch repeat and BTB do 38.2 1E+02 0.0035 21.6 6.9 51 21-78 147-204 (315)
310 3a0f_A Xyloglucanase; beta-pro 38.1 86 0.0029 25.8 6.7 68 10-77 19-94 (763)
311 3ii7_A Kelch-like protein 7; p 36.7 1E+02 0.0036 21.3 8.1 67 22-106 200-272 (306)
312 2oaj_A Protein SNI1; WD40 repe 36.0 1.4E+02 0.0049 24.9 7.8 57 12-77 18-75 (902)
313 3f3f_A Nucleoporin SEH1; struc 35.6 1E+02 0.0034 20.8 9.1 63 12-79 168-238 (351)
314 4a11_B DNA excision repair pro 35.3 1.1E+02 0.0039 21.3 9.0 68 11-78 43-119 (408)
315 3iuj_A Prolyl endopeptidase; h 35.3 1.7E+02 0.0058 23.3 9.2 34 15-48 237-277 (693)
316 1zgk_A Kelch-like ECH-associat 34.5 1.2E+02 0.004 21.2 8.1 67 22-106 215-287 (308)
317 2bkl_A Prolyl endopeptidase; m 34.1 1.7E+02 0.006 23.1 8.4 57 15-76 171-244 (695)
318 1flg_A Protein (quinoprotein e 32.9 1.1E+02 0.0036 24.4 6.3 54 21-80 496-549 (582)
319 2faf_A Phosphoenolpyruvate car 31.7 34 0.0012 28.1 3.1 59 17-79 301-360 (608)
320 1yr2_A Prolyl oligopeptidase; 31.6 1.9E+02 0.0064 23.2 7.6 35 14-48 270-313 (741)
321 4a11_B DNA excision repair pro 31.2 1.3E+02 0.0046 20.9 8.9 51 22-79 304-354 (408)
322 3ei3_A DNA damage-binding prot 31.1 1.3E+02 0.0045 26.3 7.0 28 22-49 936-965 (1158)
323 1nr3_A MTH0916, DNA-binding pr 30.9 41 0.0014 21.0 2.9 22 55-77 98-119 (122)
324 3npe_A 9-CIS-epoxycarotenoid d 30.3 1.7E+02 0.0059 23.3 7.0 57 17-79 224-287 (529)
325 1sqj_A OXG-RCBH, oligoxylogluc 29.5 91 0.0031 25.8 5.5 65 11-76 14-82 (789)
326 1tk7_A CG4244-PB; WW domain, n 28.7 94 0.0032 18.4 4.2 26 12-37 12-39 (88)
327 2dk7_A Transcription elongatio 28.1 29 0.00098 20.6 1.6 13 94-106 27-39 (73)
328 2woz_A Kelch repeat and BTB do 25.9 1.7E+02 0.0058 20.4 6.6 50 21-77 157-213 (318)
329 1y08_A Hypothetical protein SP 25.0 40 0.0014 25.5 2.3 17 64-80 252-271 (323)
330 3kvp_A Uncharacterized protein 25.0 41 0.0014 19.7 1.9 13 98-110 41-55 (72)
331 2oit_A Nucleoporin 214KDA; NH2 24.5 1.3E+02 0.0046 22.4 5.3 31 12-43 193-224 (434)
332 4ftd_A Uncharacterized protein 23.9 2.1E+02 0.0073 22.6 6.3 68 13-80 190-268 (453)
333 2cn3_A Xyloglucanase, beta-1,4 23.4 2.2E+02 0.0076 23.1 6.7 59 17-78 249-321 (737)
334 3v7d_B Cell division control p 22.0 2.3E+02 0.0079 20.5 9.1 34 12-45 311-345 (464)
335 4gq1_A NUP37; propeller, trans 22.0 2.3E+02 0.0078 20.4 6.9 51 22-79 327-379 (393)
336 2l5f_A PRE-mRNA-processing fac 21.7 1.4E+02 0.0047 17.8 5.5 41 66-106 19-74 (92)
337 3elq_A Arylsulfate sulfotransf 21.3 3.3E+02 0.011 22.1 7.2 56 16-77 211-266 (571)
338 2hwj_A AGR_C_2837P, hypothetic 21.1 43 0.0015 23.6 1.7 18 62-79 52-69 (205)
339 2ovr_B FBW7, F-BOX/WD repeat p 20.9 2.4E+02 0.0083 20.4 8.1 63 13-79 364-427 (445)
340 2jwk_A Protein TOLR; periplasm 20.5 57 0.0019 18.1 1.9 14 63-76 5-18 (74)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.58 E-value=1.2e-15 Score=114.05 Aligned_cols=101 Identities=32% Similarity=0.486 Sum_probs=78.1
Q ss_pred CCCCccceEECC-CCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCCCcccccc
Q psy4774 10 QCGRPLGMKFDK-NGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTKYKLYDG 87 (120)
Q Consensus 10 ~~g~P~Gl~~d~-~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~~~~~~~~ 87 (120)
.+++|.||++++ +|+|||||...+|++++++++++++++. ...+.+++.||++++++ +|+|||||+...|.+.++
T Consensus 78 ~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 78 LCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLAT---SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp HHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEES---EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred cCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecc---cCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 457899999997 8999999998889999998777777764 34566788999999999 999999999865554433
Q ss_pred eecce-ecCCceEEEEcCCC--ceEecCc
Q psy4774 88 LFDGL-TSGSGSFIKIGPNT--QEVLQKQ 113 (120)
Q Consensus 88 ~~~~~-~~~~G~l~~~d~~~--~~~l~~~ 113 (120)
..... ..+.|+|+++|+++ ++++.++
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~ 183 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLLKE 183 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEEEE
T ss_pred ceehcccCCCceEEEEeCCCCEEEEeccC
Confidence 33322 35678999999875 5555544
No 2
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.33 E-value=8.5e-12 Score=92.32 Aligned_cols=95 Identities=18% Similarity=0.298 Sum_probs=71.1
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCccccc---
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYD--- 86 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~--- 86 (120)
.+.|+|++++++|+||||+.. .+|.+++++ |+.++++. ...+.+++.||+++++++|+|||||+. |....
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~---~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~ 158 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVG---RYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQ 158 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEC---EETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGG
T ss_pred CCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEe---ccCCCccCCCCCEEECCCCCEEEeCcC--CCcccccc
Confidence 567999999999999999876 579999985 88888875 446678899999999999999999985 22110
Q ss_pred ceecceecCCceEEEEcCCC--ceEec
Q psy4774 87 GLFDGLTSGSGSFIKIGPNT--QEVLQ 111 (120)
Q Consensus 87 ~~~~~~~~~~G~l~~~d~~~--~~~l~ 111 (120)
........+.+.||++|+++ ++.+.
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred ccccccccCCCeEEEEcCCCCcEEEEe
Confidence 00011134567899999854 55554
No 3
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.27 E-value=3.2e-11 Score=88.12 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=70.0
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCc-ccccce
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKY-KLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~-~~~~~~ 88 (120)
.+.|.+|+++++|+|||++.. .+|.++++++|+.+.+.. ...+.+++.||+++++++|++||||+.... ...+..
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIAD---SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEEC---EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEee---ccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 467999999999999999976 679999998899887764 334567888999999999999999984110 000000
Q ss_pred ecceecCCceEEEEcCCC-ceEecCc
Q psy4774 89 FDGLTSGSGSFIKIGPNT-QEVLQKQ 113 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~-~~~l~~~ 113 (120)
........++||++++++ ++.+..+
T Consensus 145 ~~~~~~~~~~l~~~~~~g~~~~~~~~ 170 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPDGTLSAPIRD 170 (296)
T ss_dssp CCCCCSSSCEEEEECTTSCEEEEECC
T ss_pred cccccCCCcEEEEECCCCCEEEeecC
Confidence 001123456788887766 5555443
No 4
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.20 E-value=2.8e-11 Score=93.84 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=73.4
Q ss_pred CCCccceEECC--CC--cEEEEECCCC-----EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCC
Q psy4774 11 CGRPLGMKFDK--NG--ALHVADAYFG-----LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTK 81 (120)
Q Consensus 11 ~g~P~Gl~~d~--~G--~l~V~d~~~g-----i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~ 81 (120)
..+|.||.+.+ +| +||||+...+ |+++++++ +..+++. .+.+.+++.|||++++++|++|+|+..+
T Consensus 111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~-~~~~~~~---~~~g~~~~~pND~~v~~~G~fyvt~~~~- 185 (355)
T 3sre_A 111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE-KSLLHLK---TIRHKLLPSVNDIVAVGPEHFYATNDHY- 185 (355)
T ss_dssp GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT-TEEEEEE---EECCTTCSSEEEEEEEETTEEEEEESCS-
T ss_pred ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC-CEEEEEe---ccccCCCCCCceEEEeCCCCEEecCCcE-
Confidence 36999999955 45 6999998743 99999864 4455554 5788899999999999999999998853
Q ss_pred ccccc--ceecceecCCceEEEEcCCCceEecCccc
Q psy4774 82 YKLYD--GLFDGLTSGSGSFIKIGPNTQEVLQKQTD 115 (120)
Q Consensus 82 ~~~~~--~~~~~~~~~~G~l~~~d~~~~~~l~~~L~ 115 (120)
|.... ........+.|+||+|+|..++++++++.
T Consensus 186 ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~ 221 (355)
T 3sre_A 186 FIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFD 221 (355)
T ss_dssp CSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEES
T ss_pred eCCcccccchhhccCCccEEEEEECCeEEEeecCCc
Confidence 22210 01111246889999999966888888764
No 5
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.9e-10 Score=89.51 Aligned_cols=72 Identities=22% Similarity=0.349 Sum_probs=57.1
Q ss_pred cCCCCccceEECCCCcEEEEEC-CC-CEEEEECCCCcEEEEeccccc---cCC----CCCcCCCceEEcCCCCEEEEeCC
Q psy4774 9 QQCGRPLGMKFDKNGALHVADA-YF-GLYKVNVTTGQTEQLISMDTE---IDG----AKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V~d~-~~-gi~~vd~~~g~~~~~~~~~~~---~~g----~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....|.||+++++|+|||||. .+ .|.++++.+|+++.++..... .+| ..|+.|++|+++++|+|||+|+.
T Consensus 320 ~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp CBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred cEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 4467899999999999999998 74 499999667998888753100 111 24899999999999999999996
Q ss_pred C
Q psy4774 80 T 80 (120)
Q Consensus 80 ~ 80 (120)
+
T Consensus 400 n 400 (409)
T 3hrp_A 400 G 400 (409)
T ss_dssp T
T ss_pred C
Confidence 3
No 6
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.14 E-value=2.3e-10 Score=84.42 Aligned_cols=93 Identities=12% Similarity=0.045 Sum_probs=67.8
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccceec
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFD 90 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~~~ 90 (120)
.+.|.+++++++|+|||+. ..+|+++|+++++.+.+.. ...+.+++.||+++++++|++||++...... ..
T Consensus 53 ~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~-----~~ 123 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLAT---VDNDKKNNRFNDGKVDPAGRYFAGTMAEETA-----PA 123 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEE---CCTTCSSEEEEEEEECTTSCEEEEEEECCSB-----TT
T ss_pred CCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEe---cCCCCCCCCCCCEEECCCCCEEEecCCcccc-----cc
Confidence 4679999999999999997 4689999998899888864 2345578889999999999999998642110 00
Q ss_pred ceecCCceEEEEcCCC-ceEecC
Q psy4774 91 GLTSGSGSFIKIGPNT-QEVLQK 112 (120)
Q Consensus 91 ~~~~~~G~l~~~d~~~-~~~l~~ 112 (120)
....+.|+||++++++ ++.+.+
T Consensus 124 ~~~~~~~~l~~~d~~g~~~~~~~ 146 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHHVKKYFD 146 (297)
T ss_dssp BCCTTCEEEEEECTTSCEEEEEE
T ss_pred cccCCCcEEEEEECCCCEEEEee
Confidence 1123556777777765 444443
No 7
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=7.2e-10 Score=82.82 Aligned_cols=67 Identities=15% Similarity=0.187 Sum_probs=55.3
Q ss_pred ccCCCCccceEECCCCcEEEEECCC-------------------------CEEEEECCCCcEEEEeccccccCCCCCcCC
Q psy4774 8 EQQCGRPLGMKFDKNGALHVADAYF-------------------------GLYKVNVTTGQTEQLISMDTEIDGAKPQIP 62 (120)
Q Consensus 8 ~~~~g~P~Gl~~d~~G~l~V~d~~~-------------------------gi~~vd~~~g~~~~~~~~~~~~~g~~~~~p 62 (120)
....+.|.||+++++|+|||++... .|+++|+++|++.... ....+..|
T Consensus 20 ~~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~------~~~~~~~p 93 (329)
T 3fvz_A 20 YLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS------GKNLFYLP 93 (329)
T ss_dssp GCCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE------CTTTCSSE
T ss_pred ceecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc------CCCccCCc
Confidence 4457889999999999999998765 3899999888865433 23468889
Q ss_pred CceEEcCCCCEEEEeCCC
Q psy4774 63 NSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 63 ndl~v~~~G~iy~TDs~~ 80 (120)
++|+++++|+||++|+..
T Consensus 94 ~gia~d~~g~l~v~d~~~ 111 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVAL 111 (329)
T ss_dssp EEEEECTTSCEEEEETTT
T ss_pred eEEEECCCCCEEEEECCC
Confidence 999999999999999964
No 8
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.05 E-value=3.8e-10 Score=88.80 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=57.2
Q ss_pred cccCCCCccceEE---------CCCCcEEEEECCCC-EEEEECCCCcEEEEecccc----c-cCC-----CCCcCCCceE
Q psy4774 7 YEQQCGRPLGMKF---------DKNGALHVADAYFG-LYKVNVTTGQTEQLISMDT----E-IDG-----AKPQIPNSVT 66 (120)
Q Consensus 7 ~~~~~g~P~Gl~~---------d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~----~-~~g-----~~~~~pndl~ 66 (120)
.......|.||++ +++|+|||||..++ |.++++ +|+++.++.... . .+| .+|+.|.+|+
T Consensus 330 ~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia 408 (433)
T 4hw6_A 330 TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIA 408 (433)
T ss_dssp GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEE
T ss_pred cceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEE
Confidence 3345678999999 99999999998854 889998 689988886321 0 112 2689999999
Q ss_pred Ec-CCCCEEEEeCC
Q psy4774 67 VD-SDGMVYWSDSS 79 (120)
Q Consensus 67 v~-~~G~iy~TDs~ 79 (120)
++ ++|+|||+|+.
T Consensus 409 vd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 409 YDMKRKCFYIGDCD 422 (433)
T ss_dssp EETTTTEEEEEEGG
T ss_pred EECCCCEEEEEeCC
Confidence 99 78999999996
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.99 E-value=2.3e-09 Score=83.34 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=51.2
Q ss_pred Ccc-ceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCC--------CCCcCCCceEEcCCCCEEEEeC-CC
Q psy4774 13 RPL-GMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDG--------AKPQIPNSVTVDSDGMVYWSDS-ST 80 (120)
Q Consensus 13 ~P~-Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g--------~~~~~pndl~v~~~G~iy~TDs-~~ 80 (120)
.|. ||++++ +|+|||+|...+ |++++++ |++..++... ...| .+|+.|++|+++++|+|||+|+ ..
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKITPD-GECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEecC-CCEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC
Confidence 367 999999 589999998755 9999985 6777776521 0011 2488999999999999999999 63
No 10
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.98 E-value=1.2e-09 Score=88.07 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=67.9
Q ss_pred CCcccccCCCCcc-ceEEC-------CCCcEEEEECCCC-EEEEECCCCcEEEEeccccc-----------cCC-----C
Q psy4774 3 DGFKYEQQCGRPL-GMKFD-------KNGALHVADAYFG-LYKVNVTTGQTEQLISMDTE-----------IDG-----A 57 (120)
Q Consensus 3 ~~~~~~~~~g~P~-Gl~~d-------~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~-----------~~g-----~ 57 (120)
||.....+...|. |++++ ++|+|||||..++ |.++++ +|.++++++.... .+| .
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a 441 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVA 441 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTC
T ss_pred CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhh
Confidence 4555566778999 88887 6899999998854 999997 6899999874211 122 2
Q ss_pred CCcCCCceEEcCC-CCEEEEeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 58 KPQIPNSVTVDSD-GMVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 58 ~~~~pndl~v~~~-G~iy~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
+|+.|.+|+++++ |+|||+|+.+ .||.++++++
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N----------------~rIrki~~~~ 475 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVG----------------HTIRTISMEQ 475 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTT----------------TEEEEEEECC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCC----------------CEEEEEECCC
Confidence 6999999999996 9999999974 4777777766
No 11
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.98 E-value=1.3e-09 Score=85.71 Aligned_cols=70 Identities=14% Similarity=0.055 Sum_probs=59.7
Q ss_pred CCCccccc-CCCCccceEECCC---CcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 2 FDGFKYEQ-QCGRPLGMKFDKN---GALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 2 ~~~~~~~~-~~g~P~Gl~~d~~---G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
|||...+. ...+|.||++|++ |+|||+|....|.++++++++++.++. ++..|++|+++++|+|||+|
T Consensus 128 ~dG~~~~a~~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~--------~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 128 LAGPFDDCGAFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT--------NIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp CCEETTSCCCCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--------CCSCEEEEEECTTCCEEEEE
T ss_pred cCCchHHhcccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--------CCCCccEEEECCCCCEEEEc
Confidence 56777665 6789999999984 899999987669999998898887752 56789999999999999999
Q ss_pred CC
Q psy4774 78 SS 79 (120)
Q Consensus 78 s~ 79 (120)
+.
T Consensus 200 ~~ 201 (433)
T 4hw6_A 200 DQ 201 (433)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 12
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.96 E-value=4.2e-09 Score=78.61 Aligned_cols=68 Identities=24% Similarity=0.303 Sum_probs=50.2
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCC--cEEEEecccc-ccCCCCCcCCCceEEcC-CCCEEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTG--QTEQLISMDT-EIDGAKPQIPNSVTVDS-DGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g--~~~~~~~~~~-~~~g~~~~~pndl~v~~-~G~iy~TDs 78 (120)
...|.||+++++|+|||+|...+ |.++++++. .+..+..... ......+..|++|++++ +|+||++|+
T Consensus 90 ~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 90 FYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred cCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 45899999999999999998754 999998533 2333422100 01124688999999999 899999997
No 13
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.94 E-value=5e-09 Score=76.13 Aligned_cols=95 Identities=22% Similarity=0.302 Sum_probs=66.4
Q ss_pred CCCccceEECCC-CcEEEEECCCCEEEEECCCCcEEEE-eccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDKN-GALHVADAYFGLYKVNVTTGQTEQL-ISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~~-G~l~V~d~~~gi~~vd~~~g~~~~~-~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~ 88 (120)
...|.+++++++ |+|||++...+|++++++ |+...+ .. ...+.++..|++++++++|++|++++.......++.
T Consensus 70 ~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 70 GGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKK---DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYT 145 (314)
T ss_dssp ECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSB---CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCC
T ss_pred CCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEec---cCCCccccCCcCEEECCCCCEEEEecCccccccccc
Confidence 367999999999 999999987789999997 887766 43 223446678999999999999999985311000110
Q ss_pred ecceecCCceEEEEcCCC-ceEe
Q psy4774 89 FDGLTSGSGSFIKIGPNT-QEVL 110 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~-~~~l 110 (120)
.....+.++|+++++++ ++.+
T Consensus 146 -~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 146 -RSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp -BTTSSSCEEEEEECTTSCEEEE
T ss_pred -ccccCCCCeEEEECCCCCEEEe
Confidence 00123457788887765 4433
No 14
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.94 E-value=4.7e-09 Score=79.00 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=63.6
Q ss_pred CCccceEECCCCcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCccccc-cee
Q psy4774 12 GRPLGMKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYD-GLF 89 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~-~~~ 89 (120)
+.|.||++|++|+|||++... .|.++++++|++..++. ...+.+|.+++++++|.+|+|++.. .+-. +..
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~------~~~~~~p~~va~~~~g~l~v~~~~~--~~~~~f~~ 319 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT------DEKLSWTDSFNFGSDGYLYFDCNQL--HHSAPLNA 319 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE------CGGGSCEEEEEECTTSCEEEEECCG--GGSGGGBT
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE------CCceecCCeeEECCCCcEEEEeCcc--cccccccc
Confidence 589999999999999999874 59999985688777653 1247789999999999999999963 2111 111
Q ss_pred c-ceecCCceEEEEcCC
Q psy4774 90 D-GLTSGSGSFIKIGPN 105 (120)
Q Consensus 90 ~-~~~~~~G~l~~~d~~ 105 (120)
. ......++||++++.
T Consensus 320 ~~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 320 GENISAPPYYIFRLKPL 336 (343)
T ss_dssp TCCCCCSCEEEEEECCS
T ss_pred CCCcCcCCeEEEEEECC
Confidence 1 123345899999754
No 15
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=8.8e-09 Score=77.49 Aligned_cols=68 Identities=25% Similarity=0.266 Sum_probs=51.7
Q ss_pred CCCccceEECCCCcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
...|.||++|++|+|||+|.. ..|+++|+++|++....... .....+..+||++++++ +|.+|+||++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~-~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLP-PPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECC-TTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECC-hhhcccccccceEEEecCCCEEEEEcCc
Confidence 478999999999999999975 46999999888844333211 11133556889999997 4799999985
No 16
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.91 E-value=4.7e-09 Score=78.03 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=50.7
Q ss_pred CCCccceEECC-CCcEEEEECC------------------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAY------------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG 71 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~------------------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G 71 (120)
..+|++|++++ +|+|||+|.. .+|+++++++++++.+.. .+..||+|+++++|
T Consensus 125 ~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--------~~~~p~gia~~~dg 196 (322)
T 2fp8_A 125 FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--------ELHVPGGAEVSADS 196 (322)
T ss_dssp CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--------EESCCCEEEECTTS
T ss_pred ccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--------CCccCcceEECCCC
Confidence 35799999999 9999999864 239999998788776642 35679999999998
Q ss_pred C-EEEEeCC
Q psy4774 72 M-VYWSDSS 79 (120)
Q Consensus 72 ~-iy~TDs~ 79 (120)
+ |||+|+.
T Consensus 197 ~~lyv~d~~ 205 (322)
T 2fp8_A 197 SFVLVAEFL 205 (322)
T ss_dssp SEEEEEEGG
T ss_pred CEEEEEeCC
Confidence 6 9999986
No 17
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.88 E-value=1.1e-08 Score=76.72 Aligned_cols=84 Identities=20% Similarity=0.334 Sum_probs=63.4
Q ss_pred CCCCccceEECCC-CcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccc
Q psy4774 10 QCGRPLGMKFDKN-GALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDG 87 (120)
Q Consensus 10 ~~g~P~Gl~~d~~-G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~ 87 (120)
....|+||++|++ ++||++|... .|.+++.++...++++. .+..+..|.+|+++. |.||+||..
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~-----~~~~~~~P~giav~~-~~ly~~d~~-------- 227 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-----DEKRLAHPFSLAVFE-DKVFWTDII-------- 227 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-----CTTTTSSEEEEEEET-TEEEEEETT--------
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEee-----cCCccCCcEEEEEEC-CEEEEEECC--------
Confidence 3578999999975 6999999875 49999997666667753 223567899999974 899999975
Q ss_pred eecceecCCceEEEEcCCC---ceEecCccc
Q psy4774 88 LFDGLTSGSGSFIKIGPNT---QEVLQKQTD 115 (120)
Q Consensus 88 ~~~~~~~~~G~l~~~d~~~---~~~l~~~L~ 115 (120)
+++|+++++.+ ++++..+|.
T Consensus 228 --------~~~V~~~~~~~g~~~~~i~~~~~ 250 (316)
T 1ijq_A 228 --------NEAIFSANRLTGSDVNLLAENLL 250 (316)
T ss_dssp --------TTEEEEEETTTCCCCEEEECSCS
T ss_pred --------CCeEEEEeCCCCcceEEEecCCC
Confidence 46888888743 666665543
No 18
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.87 E-value=8.9e-09 Score=77.89 Aligned_cols=65 Identities=20% Similarity=0.347 Sum_probs=50.8
Q ss_pred cCCCCccceEECCC-CcEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCC
Q psy4774 9 QQCGRPLGMKFDKN-GALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 80 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~-G~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~ 80 (120)
.....|.||++|+. |.||++|.. ..|+++++++...++++. ..+..||+|++|+ +++|||+|+..
T Consensus 119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-------~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-------SEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-------SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-------CCCCCccEEEEeccCCEEEEEECCC
Confidence 34578999999974 799999964 459999986445555542 2478899999997 58999999964
No 19
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=8.5e-09 Score=78.61 Aligned_cols=63 Identities=16% Similarity=0.275 Sum_probs=49.8
Q ss_pred CCCccceEECC-CCcEEEEECCC-C-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYF-G-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~-g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~ 80 (120)
...|.||++|+ +|.||++|... + |.++++++...++++. ..+..||+|++|+ +++|||+|+..
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-------~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-------THLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-------SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-------CCCCCcceEEEeCCCCEEEEEECCC
Confidence 47899999997 57999999864 4 9999986544455432 3477899999996 68999999975
No 20
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.86 E-value=1.3e-08 Score=77.95 Aligned_cols=90 Identities=17% Similarity=0.257 Sum_probs=61.4
Q ss_pred CCCccceEECCC----CcEEEEECC--------CCEEEEECCCC-----cEEEEeccccccCCCCCcCCCceEEcCCCCE
Q psy4774 11 CGRPLGMKFDKN----GALHVADAY--------FGLYKVNVTTG-----QTEQLISMDTEIDGAKPQIPNSVTVDSDGMV 73 (120)
Q Consensus 11 ~g~P~Gl~~d~~----G~l~V~d~~--------~gi~~vd~~~g-----~~~~~~~~~~~~~g~~~~~pndl~v~~~G~i 73 (120)
.+.|+||+++++ |.|||++.. ..|++++.+++ +.++++. ..+....+.+++|++++||.|
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~---~~~~~~~h~~~~l~~~pDG~L 148 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLID---GIPGAYIHNGGRIRFGPDGML 148 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEE---EEECCSSCCCCCEEECTTSCE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEE---cCCCCCCcCCceEEECCCCcE
Confidence 367999999997 899999864 45999987644 2444443 223445778999999999999
Q ss_pred EEEeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 74 YWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 74 y~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
|||+...... ... .......|+|+|+++++
T Consensus 149 yvt~G~~~~~--~~~-~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 149 YITTGDAADP--RLA-QDLSSLAGKILRVDEEG 178 (354)
T ss_dssp EEECCCTTCG--GGG-TCTTCCSSEEEEECTTS
T ss_pred EEEECCCCCC--ccc-cCCCCCCeEEEEEcCCC
Confidence 9997642110 000 00123568888888876
No 21
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.84 E-value=1.9e-08 Score=75.42 Aligned_cols=64 Identities=25% Similarity=0.346 Sum_probs=50.1
Q ss_pred CCCCccceEECC-CCcEEEEECCC--CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 10 QCGRPLGMKFDK-NGALHVADAYF--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 10 ~~g~P~Gl~~d~-~G~l~V~d~~~--gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
...+|.||++|+ +|.||++|... .|.++++++...++++. ..+..||+|++|++ ++|||+|+..
T Consensus 118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~-------~~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-------ENIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-------SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE-------CCCCCceEEEEeccCCEEEEEECCC
Confidence 357899999997 57999999763 49999986444445542 25789999999974 7999999874
No 22
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=6e-09 Score=81.74 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=61.1
Q ss_pred ccCCCCcc-ceEE--------CCCCcEEEEECCC-CEEEEECCCCcEEEEecccc-cc----CC-----CCCcCCCceEE
Q psy4774 8 EQQCGRPL-GMKF--------DKNGALHVADAYF-GLYKVNVTTGQTEQLISMDT-EI----DG-----AKPQIPNSVTV 67 (120)
Q Consensus 8 ~~~~g~P~-Gl~~--------d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~-~~----~g-----~~~~~pndl~v 67 (120)
......|. |+++ |++|+|||||..+ .|.++++ +|+++.++.... .. +| .+|+.|.+|++
T Consensus 328 ~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giav 406 (430)
T 3tc9_A 328 KARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVY 406 (430)
T ss_dssp GCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEE
T ss_pred ceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEE
Confidence 34567899 8998 5679999999874 4999997 589888886311 01 22 25899999999
Q ss_pred cC-CCCEEEEeCCCCcccccceecceecCCceEEEEcCC
Q psy4774 68 DS-DGMVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPN 105 (120)
Q Consensus 68 ~~-~G~iy~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~ 105 (120)
++ +|+|||+|+. +.||.+++++
T Consensus 407 d~~~g~lyVaD~~----------------n~rIr~i~~e 429 (430)
T 3tc9_A 407 DEERECFFIGDRE----------------NRRIRKIGYE 429 (430)
T ss_dssp ETTTTEEEEEEGG----------------GTEEEEEEEC
T ss_pred ECCCCEEEEEECC----------------CCeEEEEccC
Confidence 99 6999999996 3577777654
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.80 E-value=2.9e-08 Score=71.69 Aligned_cols=63 Identities=19% Similarity=0.342 Sum_probs=48.8
Q ss_pred CCCccceEECCCCcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+|+++++|+|||++... .|++++++ |+...... ....+..|++|+++++|+||++|+.
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-----~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG-----CSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE-----CTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeC-----CCCccCCcEEEEECCCCCEEEEECC
Confidence 3579999999999999999764 59999985 55333221 1134667999999999999999975
No 24
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.80 E-value=2.7e-08 Score=77.29 Aligned_cols=63 Identities=21% Similarity=0.436 Sum_probs=50.7
Q ss_pred CCCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 10 QCGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
....|.||++|. .++||++|...+ |.++++++...++++. ..+..|++|++|+ .|.|||||..
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-------~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-------CSSCCEEEEEEETTTTEEEEEECS
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-------CCCCCcceEEEecccCeEEEEeCC
Confidence 346799999997 679999998754 8889987666666653 2467799999998 5899999975
No 25
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.79 E-value=2.3e-08 Score=77.16 Aligned_cols=63 Identities=16% Similarity=0.278 Sum_probs=49.9
Q ss_pred CCCccceEECC-CCcEEEEECCC--CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYF--GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~--gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~ 80 (120)
...|.||++|+ +|.||++|... .|+++++++...++++. ..+..||+|++|+ +++|||+|+..
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-------~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-------THLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-------SSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-------CCCCCeeeEEEeCCCCEEEEEECCC
Confidence 46899999997 56999999764 49999986545555542 2477899999996 58999999975
No 26
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.79 E-value=2.9e-08 Score=81.54 Aligned_cols=61 Identities=21% Similarity=0.359 Sum_probs=49.1
Q ss_pred CCccceEECCC-CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 12 GRPLGMKFDKN-GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~-G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
+.|.|||+|.. ++||++|...+ |.++++++...+++.. ..+..|++|++|| +|.|||||..
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-------~~l~~P~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-------KDLDSPRALALDPAEGFMYWTEWG 143 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-------SSCCCEEEEEEETTTTEEEEEECS
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-------CCCCCcccEEEccCCCeEEEeCCC
Confidence 67999999965 69999998754 8899987555556642 3567899999997 6999999964
No 27
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=4e-08 Score=77.00 Aligned_cols=64 Identities=19% Similarity=0.226 Sum_probs=51.5
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~~ 80 (120)
..+|.|+++++ +|.|||+|...+ |+++++++++...+.. .. ...+|++|+++++|+ ||++|...
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~----~~--~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT----IQ--DSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE----CS--SSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE----cC--CCCcceeEEEcCCCCEEEEEECCC
Confidence 57899999999 899999998754 9999998776645542 11 235799999999998 99999963
No 28
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.78 E-value=3.3e-08 Score=74.78 Aligned_cols=80 Identities=21% Similarity=0.326 Sum_probs=60.0
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~ 88 (120)
...|+||++|+ +++||++|...+ |.+++.++...++++. ..+..|++|+++ .+.+|+||..
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-------~~~~~P~glav~-~~~lywtd~~--------- 227 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-------GSLPHPFALTLF-EDILYWTDWS--------- 227 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SCCSCEEEEEEE-TTEEEEEETT---------
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec-------CCCCCceEEEEe-CCEEEEEecC---------
Confidence 46899999997 579999998855 9999987656666652 246789999998 4699999986
Q ss_pred ecceecCCceEEEEcCCC---ceEecCcc
Q psy4774 89 FDGLTSGSGSFIKIGPNT---QEVLQKQT 114 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~---~~~l~~~L 114 (120)
+++|+++++.+ ++++..++
T Consensus 228 -------~~~V~~~~~~~G~~~~~i~~~~ 249 (318)
T 3sov_A 228 -------THSILACNKYTGEGLREIHSDI 249 (318)
T ss_dssp -------TTEEEEEETTTCCSCEEEECCC
T ss_pred -------CCeEEEEECCCCCceEEEeCCC
Confidence 35777777633 45554443
No 29
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=3.7e-08 Score=70.17 Aligned_cols=62 Identities=24% Similarity=0.346 Sum_probs=48.9
Q ss_pred CCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 12 GRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
..|.+|+++++|+|||++.. ..|.+++++++...... ...+..|++|+++++|+||+++...
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-------FTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-------CSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-------ccCCCCceEEEECCCCCEEEEECCC
Confidence 57999999999999999976 46999998755533221 1235678999999999999999753
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=3.8e-08 Score=70.10 Aligned_cols=61 Identities=23% Similarity=0.333 Sum_probs=48.5
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..|.+|+++++|+|||++...+|++++++++....+. ...+..|++++++++|+||++|..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~-------~~~~~~p~~i~~~~~g~l~v~~~~ 127 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP-------FDGLNYPEGLAVDTQGAVYVADRG 127 (270)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC-------CCSCSSEEEEEECTTCCEEEEEGG
T ss_pred CCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeee-------cCCcCCCcceEECCCCCEEEEECC
Confidence 5799999999999999998456999998755443331 123567899999999999999975
No 31
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.77 E-value=4.6e-08 Score=74.68 Aligned_cols=90 Identities=12% Similarity=0.182 Sum_probs=61.9
Q ss_pred CCCccceEECCC----CcEEEEECC------CCEEEEECCCCc---EEEEeccccccC--CCCCcCCCceEEcCCCCEEE
Q psy4774 11 CGRPLGMKFDKN----GALHVADAY------FGLYKVNVTTGQ---TEQLISMDTEID--GAKPQIPNSVTVDSDGMVYW 75 (120)
Q Consensus 11 ~g~P~Gl~~d~~----G~l~V~d~~------~gi~~vd~~~g~---~~~~~~~~~~~~--g~~~~~pndl~v~~~G~iy~ 75 (120)
.+.|+||+++++ +.|||++.. ..|++++.++++ .++++. ..+ ....+.|++|++++||.|||
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~---~~p~~~~~~h~~~~l~~~pdG~Lyv 150 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLD---GIPARPHGLHSGGRIAFGPDGMLYV 150 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEE---EECCCTTCCCCCCCEEECTTSCEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEE---eCCCCCCCCcCCceEEECCCCCEEE
Confidence 468999999998 799999864 459999876543 334443 222 34577899999999999999
Q ss_pred EeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 76 SDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 76 TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
|+...... ... .......|+|+|+++++
T Consensus 151 ~~G~~~~~--~~~-~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 151 TTGEVYER--ELA-QDLASLGGKILRLTPEG 178 (352)
T ss_dssp ECCCTTCG--GGG-GCTTCSSSEEEEECTTS
T ss_pred EECCCCCC--ccc-cCCCCCceEEEEEcCCC
Confidence 98653210 000 00124568999998875
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.75 E-value=6.1e-08 Score=69.97 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=49.4
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
...|.+|+++++|+|||++.. ..|.++++++..+..+. ..+ .+..|++|+++++|+||+++...
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~-----~~g-~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIG-----GEG-ITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEES-----CTT-TSCSEEEEEECTTCCEEEEECSS
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEc-----cCC-ccCCCcEEEECCCCCEEEEeCCC
Confidence 357999999999999999976 56999998533333332 122 36789999999999999999764
No 33
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.75 E-value=3.5e-08 Score=71.31 Aligned_cols=63 Identities=22% Similarity=0.286 Sum_probs=48.5
Q ss_pred CCCccceEECC-CCcEEEEECC---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
...|.||++|+ +|+||+++.. ..|+++++++...+++.. ..+..|++++++++ +.||++|+..
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~-------~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ-------DNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC-------TTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE-------CCCCCCcEEEEcCCCCEEEEEECCC
Confidence 36899999999 5799999975 248889986444444432 24678999999996 6899999975
No 34
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.75 E-value=4.3e-08 Score=74.71 Aligned_cols=61 Identities=23% Similarity=0.327 Sum_probs=48.3
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|+||++|+ +++||++|...+ |.+++.++...++++. ..+..|++|+++ +|.||+||..
T Consensus 202 ~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-------~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 202 LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-------QGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-------CCCCCceEEEEE-CCEEEEecCC
Confidence 46799999996 579999998855 9999987555555542 136789999994 6899999986
No 35
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.74 E-value=4.5e-08 Score=72.49 Aligned_cols=75 Identities=23% Similarity=0.243 Sum_probs=58.1
Q ss_pred CCCCccceEECCCCcEEEEECC-CC--EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCccccc
Q psy4774 10 QCGRPLGMKFDKNGALHVADAY-FG--LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYD 86 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~-~g--i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~ 86 (120)
..++|.||+++++|+||||+.. .+ |+++++++|+++.++.. . ...++|++++.+++++|++|+.
T Consensus 70 ~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~----~--~~~~~~g~~~~~~~~~~v~d~~------- 136 (306)
T 2p4o_A 70 VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL----P--DAIFLNGITPLSDTQYLTADSY------- 136 (306)
T ss_dssp CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC----T--TCSCEEEEEESSSSEEEEEETT-------
T ss_pred CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC----C--CccccCcccccCCCcEEEEECC-------
Confidence 3468999999999999999965 23 99999888998887642 2 2456799998888899999974
Q ss_pred ceecceecCCceEEEEcCCC
Q psy4774 87 GLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 87 ~~~~~~~~~~G~l~~~d~~~ 106 (120)
.|+||++|+.+
T Consensus 137 ---------~g~i~~~d~~~ 147 (306)
T 2p4o_A 137 ---------RGAIWLIDVVQ 147 (306)
T ss_dssp ---------TTEEEEEETTT
T ss_pred ---------CCeEEEEeCCC
Confidence 36777777653
No 36
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.73 E-value=6.7e-08 Score=71.55 Aligned_cols=60 Identities=8% Similarity=0.116 Sum_probs=48.3
Q ss_pred CCCccceEECCCCcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.|++++++|+|||+|... .|+++|++ ++...++. .. ..|++|+++++|++|++|..
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~-g~~~~~~~----~~----~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHAT----VE----GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEE----CS----SEEEEEEECTTSCEEEEEEC
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCC-CceEEEEe----CC----CCceeEEEcCCCcEEEEecc
Confidence 4789999999999999999764 49999986 55555543 12 25899999999999999964
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.73 E-value=7.1e-08 Score=69.68 Aligned_cols=61 Identities=21% Similarity=0.418 Sum_probs=48.0
Q ss_pred CCccceEECCC-CcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 12 GRPLGMKFDKN-GALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~-G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
..|.||+++++ ++||++|... .|.++++++...+++.. ..+..|+++++++ +|.|||+|..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-------~~~~~P~~i~vd~~~g~lyv~~~~ 142 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-------TGLVNPRGIVTDPVRGNLYWTDWN 142 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSSEEEEEEETTTTEEEEEECC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-------CCCCCccEEEEeeCCCEEEEEECC
Confidence 68999999985 6999999874 49999986444445542 1356899999999 5899999975
No 38
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.72 E-value=7.6e-08 Score=81.16 Aligned_cols=64 Identities=22% Similarity=0.395 Sum_probs=51.3
Q ss_pred CCCCccceEECCCC-cEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 10 QCGRPLGMKFDKNG-ALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G-~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
....|.|||+|..+ +||++|...+ |.++++++..+++++. ..+..|++|+|++. |.|||||...
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-------~~l~~P~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-------CTTCCEEEEEEETTTTEEEEEECSS
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-------CCCCCcceEEEecCCCCEEEecCCC
Confidence 35789999999765 9999998854 9999987666666653 24667999999985 8999999754
No 39
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.72 E-value=8e-08 Score=78.78 Aligned_cols=61 Identities=21% Similarity=0.348 Sum_probs=49.2
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~ 79 (120)
..|.|||+|. .++||++|...+ |.++++++..+++++. ..+..|++|++|+. |.|||||..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-------~~l~~P~~Iavdp~~g~ly~tD~g 147 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-------QELDQPRAIALDPSSGFMYWTDWG 147 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSCCCCEEEETTTTEEEEEECS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe-------CCCCCCceEEEecCCCeEEEeccC
Confidence 6899999998 568999998755 8888986555556642 35778999999985 899999964
No 40
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.72 E-value=5e-08 Score=75.75 Aligned_cols=82 Identities=21% Similarity=0.374 Sum_probs=59.9
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~ 88 (120)
...|+||++|+ +++||++|...+ |.+++.++..+++++. ....+..|.+|+++ .+.||+||..
T Consensus 245 l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-----~~~~l~~P~gl~v~-~~~lywtd~~--------- 309 (400)
T 3p5b_L 245 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-----DEKRLAHPFSLAVF-EDKVFWTDII--------- 309 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE-----CSSTTSSEEEEEEE-TTEEEEEESS---------
T ss_pred CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe-----CCCCCCCCEEEEEe-CCEEEEecCC---------
Confidence 47899999996 469999998754 9999987666666653 22357788999995 4699999975
Q ss_pred ecceecCCceEEEEcCCC---ceEecCcc
Q psy4774 89 FDGLTSGSGSFIKIGPNT---QEVLQKQT 114 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~---~~~l~~~L 114 (120)
+++|+++|+.+ ++++..++
T Consensus 310 -------~~~V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 310 -------NEAIFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp -------SCSEEEEESSSCCCCEEEECSC
T ss_pred -------CCeEEEEEcCCCCceEEEecCC
Confidence 35677776433 55555444
No 41
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.70 E-value=8.6e-09 Score=79.42 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=50.3
Q ss_pred CccceEE---CCCCcEEEE-EC-------------CCCEEEEECC---CCcEEEEeccccc------cCCCCCcCCCceE
Q psy4774 13 RPLGMKF---DKNGALHVA-DA-------------YFGLYKVNVT---TGQTEQLISMDTE------IDGAKPQIPNSVT 66 (120)
Q Consensus 13 ~P~Gl~~---d~~G~l~V~-d~-------------~~gi~~vd~~---~g~~~~~~~~~~~------~~g~~~~~pndl~ 66 (120)
+|.||.+ |++|+|||+ +. ...|+++|++ +++....++.... ..|.++..+||++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 5789999 799999995 52 2449999987 6776666553111 1133556799999
Q ss_pred EcCCCCEEEEeCCC
Q psy4774 67 VDSDGMVYWSDSST 80 (120)
Q Consensus 67 v~~~G~iy~TDs~~ 80 (120)
+|++||+|+||+..
T Consensus 144 vD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 144 QDRDGNSYVAFALG 157 (334)
T ss_dssp ECTTSCEEEEEEES
T ss_pred ECCCCCEEEeCCCC
Confidence 99999999999964
No 42
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.70 E-value=9.2e-08 Score=70.32 Aligned_cols=64 Identities=20% Similarity=0.335 Sum_probs=50.9
Q ss_pred CCCccceEECCCCcEEEEECCC-----CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYF-----GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~-----gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+|+++++|+|||+.... +|+++|+++++.+.+.. . ..+...|++++++++|++|++++.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~---~--~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE---D--LSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC---S--SSSCCCEEEEEECTTSCEEEEECC
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc---c--CccCCcccceEECCCCCEEEEecc
Confidence 4679999999999999998654 79999998877664432 1 123457899999999999999974
No 43
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.69 E-value=1.6e-07 Score=72.41 Aligned_cols=64 Identities=20% Similarity=0.460 Sum_probs=51.4
Q ss_pred CCCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCC
Q psy4774 10 QCGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSST 80 (120)
Q Consensus 10 ~~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~ 80 (120)
...+|.||++|+ ++.||++|...+ |++++++++.++.++. ..+..|++|++|+ .|+|||||+..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~lY~~d~~~ 180 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGT 180 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-------SSCSCCCCEEEETTTTEEEEEETTT
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-------CCCCCccEEEEEeCCCeEEEEcCCC
Confidence 457899999995 579999998754 9999998766666653 2356799999997 68999999964
No 44
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.68 E-value=1e-07 Score=78.10 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=50.1
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
.+.|.|||+|. .++||++|...+ |.+++.++...+++.. ..|+.|++|+++|. |.|||||...
T Consensus 391 ~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~-------~~l~~P~~iavdp~~G~ly~tD~g~ 456 (619)
T 3s94_A 391 IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILIS-------EDLEEPRAIVLDPMVGYMYWTDWGE 456 (619)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------TTCCSEEEEEEETTTTEEEEEECSS
T ss_pred CCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEE-------CCCCCeeeEEEEcCCCcEEEecCCC
Confidence 47899999996 579999998755 8888886555555642 25888999999985 9999999753
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.67 E-value=1.8e-07 Score=66.90 Aligned_cols=62 Identities=11% Similarity=0.277 Sum_probs=49.9
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+|+++++|+|||++.. .+|.++++ +++...+.. . .....|.+|+++++|+||+++..
T Consensus 182 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~-----~-~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 182 ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI-----P-TPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC-----S-STTCCEEEEEECSTTCEEEEETT
T ss_pred CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC-----C-CCCCCceeEEECCCCCEEEeccC
Confidence 457899999999999999875 56999999 787665531 1 24567899999999999999864
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.67 E-value=2.3e-07 Score=66.44 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=50.9
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
...|.+|+++++|+|||++.. .+|+++++ +++...+.. ...+..|++++++++|+||+++...
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~------~~~~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPL------PTNAAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC------SSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeC------CCCCCCcceEEECCCCCEEEEccCC
Confidence 467999999999999999975 45999998 677766531 1245678999999999999999753
No 47
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=1.1e-07 Score=76.58 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.4
Q ss_pred CCCccceEECCCCc-EEEEECCCC-EEEEECC--CCcE---EEEecc-ccc--cCC----CCCcCCC-ceEEc-------
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAYFG-LYKVNVT--TGQT---EQLISM-DTE--IDG----AKPQIPN-SVTVD------- 68 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~~g-i~~vd~~--~g~~---~~~~~~-~~~--~~g----~~~~~pn-dl~v~------- 68 (120)
.+.|.+|+++++|+ |||+|..++ |++++.+ ++.+ ++++.. ... .+| .+|+.|. +++++
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 46799999999998 899998754 8887653 3333 466652 110 112 3789999 88887
Q ss_pred CCCCEEEEeCCCCcccccceecceecCCceEEEEcCCC-ceEecC
Q psy4774 69 SDGMVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT-QEVLQK 112 (120)
Q Consensus 69 ~~G~iy~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~-~~~l~~ 112 (120)
++|+|||+|+. +.||.++++++ +++++.
T Consensus 389 ~~g~lyVaD~~----------------N~rIr~i~~~G~v~TiaG 417 (496)
T 3kya_A 389 EEYDFYFVDRL----------------NFCVRKVTPEGIVSTYAG 417 (496)
T ss_dssp CCEEEEEEEGG----------------GTEEEEECTTCBEEEEEE
T ss_pred CCCeEEEEECC----------------CCEEEEEeCCCCEEEEec
Confidence 67999999996 46999999888 777764
No 48
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.66 E-value=2.4e-07 Score=66.35 Aligned_cols=62 Identities=11% Similarity=0.244 Sum_probs=50.8
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+|+++++|+|||++.. .+|.+++++ ++...+.. . ..+..|.+++++++|++|+++..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~-----~-~~~~~~~~i~~~~~g~l~v~~~~ 81 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEV-----P-TPDAKVMCLIVSSLGDIWFTENG 81 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEC-----S-STTCCEEEEEECTTSCEEEEETT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEEC-----C-CCCCcceeEEECCCCCEEEEecC
Confidence 468999999999999999975 569999987 77766531 1 23567899999999999999974
No 49
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.64 E-value=3.2e-07 Score=65.66 Aligned_cols=62 Identities=16% Similarity=0.303 Sum_probs=50.3
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+|++|++|+|||++.. .+|.+++++ ++...+.. . .....|.+++++++|++|+++..
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~-----~-~~~~~~~~i~~~~~g~l~v~~~~ 76 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPL-----P-TPDAKVMCLTISSDGEVWFTENA 76 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEC-----S-STTCCEEEEEECTTSCEEEEETT
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecC-----C-cccCceeeEEECCCCCEEEeCCC
Confidence 468999999999999999875 569999997 77766642 1 12357899999999999999874
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.61 E-value=1.8e-07 Score=77.53 Aligned_cols=81 Identities=22% Similarity=0.377 Sum_probs=60.0
Q ss_pred CCCccceEECCC-CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDKN-GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~~-G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~ 88 (120)
...|+||++|++ ++||++|...+ |.++++++..+++++. ....+..|.+|+++.+ .|||||..
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-----~~~~~~~P~glavd~~-~lywtd~~--------- 603 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-----DEKRLAHPFSLAVFED-KVFWTDII--------- 603 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-----CSSSCSSCCCCEEETT-EEEEECST---------
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-----cCCcCCCceEeEEECC-EEEEEeCC---------
Confidence 568999999976 69999998754 9999987555666653 2235778999999875 89999975
Q ss_pred ecceecCCceEEEEcCCC---ceEecCc
Q psy4774 89 FDGLTSGSGSFIKIGPNT---QEVLQKQ 113 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~---~~~l~~~ 113 (120)
+++|+++++.+ +++|..+
T Consensus 604 -------~~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 604 -------NEAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp -------TTCEEEEETTTEEEEECCCTT
T ss_pred -------CCeEEEEEccCCCceEEeecC
Confidence 35777777654 4444433
No 51
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.61 E-value=1.6e-07 Score=77.11 Aligned_cols=63 Identities=17% Similarity=0.309 Sum_probs=51.4
Q ss_pred CCCCccceEECC-CCcEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 10 QCGRPLGMKFDK-NGALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 10 ~~g~P~Gl~~d~-~G~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
....|.||++|| +|.||++|.. ..|.++++++..+++++. .+..||+|++|++ ++||++|+..
T Consensus 121 ~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--------~~~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--------NVGRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--------SCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--------CCCCcceEEEccccCEEEEEECCC
Confidence 357899999997 6899999964 359999997666666652 4678999999985 7999999964
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.59 E-value=2.1e-07 Score=68.42 Aligned_cols=64 Identities=16% Similarity=0.362 Sum_probs=47.0
Q ss_pred CCCccceEECCCCc-EEEEECC-CCEEEEEC--CCCcEE---EEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAY-FGLYKVNV--TTGQTE---QLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~--~~g~~~---~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|+||+++++|+ ||+++.. ..|++++. ++|++. ++... .. ....|+++++|++|+||+++..
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~----~~-~~~~p~g~~~d~~G~lwva~~~ 218 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL----EK-EEQIPDGMCIDAEGKLWVACYN 218 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC----CG-GGCEEEEEEEBTTSCEEEEEET
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC----CC-CCCCCCeeEECCCCCEEEEEcC
Confidence 35799999999995 8999986 45888864 567653 34321 11 1246899999999999999875
No 53
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.59 E-value=1.5e-07 Score=70.28 Aligned_cols=64 Identities=11% Similarity=0.017 Sum_probs=52.0
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..|.+++++++|++||+. ..+|+++|+++|+.+.+.. ...+.+.+.+|+++++++|++|+++..
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~---~~~~~~~~~~~~i~~d~~G~l~v~~~~ 153 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAE---LESDLPGNRSNDGRMHPSGALWIGTMG 153 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEEC---SSTTCTTEEEEEEEECTTSCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEee---CCCCCCCCCCCCEEECCCCCEEEEeCC
Confidence 568899999999999986 4679999998898887764 122345677999999999999999863
No 54
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.59 E-value=1.2e-07 Score=78.68 Aligned_cols=63 Identities=25% Similarity=0.330 Sum_probs=48.5
Q ss_pred CCCccceEECCC-CcEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 11 CGRPLGMKFDKN-GALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~~-G~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
...|.||++|+. |.||++|.. ..|.++++++...++++. ..+.+||+|+++++ ++|||+|+..
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-------~~l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-------ENIQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC-------SSCSSCCCEEECTTTCCEEEEETTT
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe-------CCCCCccEEEEeccCCEEEEEecCC
Confidence 467999999985 799999865 359999885433344432 25789999999985 7999999874
No 55
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.56 E-value=2.7e-07 Score=77.78 Aligned_cols=82 Identities=21% Similarity=0.364 Sum_probs=59.7
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~ 88 (120)
...|+||++|+ +++||++|...+ |.+++.++..+.+++. .+..+..|.+|+++. ++|||||..
T Consensus 557 l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-----~~~~l~~P~glav~~-~~lYwtD~~--------- 621 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-----DEKRLAHPFSLAVFE-DKVFWTDII--------- 621 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-----CTTTTSSEEEEEEET-TEEEEEETT---------
T ss_pred CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-----CCCccCCCCEEEEeC-CEEEEEECC---------
Confidence 46899999994 579999998754 9999997666666653 233566778888865 599999986
Q ss_pred ecceecCCceEEEEcCCC---ceEecCcc
Q psy4774 89 FDGLTSGSGSFIKIGPNT---QEVLQKQT 114 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~---~~~l~~~L 114 (120)
+++|+++|+.+ +++|..+|
T Consensus 622 -------~~~I~~~dk~tG~~~~~l~~~l 643 (791)
T 3m0c_C 622 -------NEAIFSANRLTGSDVNLLAENL 643 (791)
T ss_dssp -------TTEEEEEETTTCCCCEEEECSC
T ss_pred -------CCEEEEEeCCCCcceEEeecCC
Confidence 35777776433 55555554
No 56
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.51 E-value=6.9e-07 Score=73.19 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=65.0
Q ss_pred CCCccceEECC-CCcEEEEECC---------------------CC-EEEEECCCC-------cEEEEeccccc-------
Q psy4774 11 CGRPLGMKFDK-NGALHVADAY---------------------FG-LYKVNVTTG-------QTEQLISMDTE------- 53 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~---------------------~g-i~~vd~~~g-------~~~~~~~~~~~------- 53 (120)
..||.++++++ +|++|++-.. .| |+++.++.+ ++++++..+..
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 36899999998 5799998321 13 999976432 25555421110
Q ss_pred -------cCCCCCcCCCceEEcCCCCEEE-EeCCCCcccccceecceecCCceEEEEcCCC--ceEecCc
Q psy4774 54 -------IDGAKPQIPNSVTVDSDGMVYW-SDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT--QEVLQKQ 113 (120)
Q Consensus 54 -------~~g~~~~~pndl~v~~~G~iy~-TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~--~~~l~~~ 113 (120)
..+.+|+.||+|+|+++|+||| ||+.. .... . .....+.+||+++|.+ ++.++.+
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~--~~~g-~--~~~~gnn~v~~~dp~tGel~~fl~~ 527 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDS--SNAG-D--FAGMGNNQMLCADPATGEIRRFMVG 527 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCC--CCSG-G--GTTCCSCEEEEECTTTCCEEEEEEC
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCc--Cccc-c--ccccCCceEEEEeCCCCeEEEEEeC
Confidence 1235799999999999999999 99873 2110 0 0123445899999965 7777654
No 57
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.49 E-value=4.7e-07 Score=69.07 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=51.2
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC----CCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD----GMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~----G~iy~TDs~ 79 (120)
...|.+|+++++|+|||++....|++++ +|+.+.++.. .........|++|+++++ |.||++++.
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~--~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAEL--SVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEEC--CCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecc--eEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 5689999999999999999876699998 4777776642 111223567999999997 899999984
No 58
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.44 E-value=1.1e-06 Score=63.88 Aligned_cols=61 Identities=7% Similarity=-0.002 Sum_probs=49.2
Q ss_pred CCCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+..|.|++++++|+ ||+++.. .+|++++++++ .+.+.. +...|++++++++|++|+++..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~--------~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH--------PSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES--------SCSSEEEEEECTTCCEEEEETT
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC--------CCCCcceeeECCCCcEEEEecC
Confidence 456799999999997 8888876 56999999876 665542 2346889999999999999975
No 59
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.43 E-value=5.2e-07 Score=65.36 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=55.2
Q ss_pred CCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCCCCccccccee
Q psy4774 12 GRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSSTKYKLYDGLF 89 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~~~~~~~~~~~ 89 (120)
+.|.+|++|++|+|||++.. .+|.++++++|+...... .+...|.+++++++|+ ||+++..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~-------~~~~~~~~i~~~~dg~~l~v~~~~---------- 288 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR-------CPFEKPSNLHFKPQTKTIFVTEHE---------- 288 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE-------CSSSCEEEEEECTTSSEEEEEETT----------
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe-------CCCCCceeEEECCCCCEEEEEeCC----------
Confidence 56999999999999999865 569999997565432221 1235688999999998 9999985
Q ss_pred cceecCCceEEEEcCCC
Q psy4774 90 DGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 90 ~~~~~~~G~l~~~d~~~ 106 (120)
.|.|++++++.
T Consensus 289 ------~~~l~~~~~~~ 299 (314)
T 1pjx_A 289 ------NNAVWKFEWQR 299 (314)
T ss_dssp ------TTEEEEEECSS
T ss_pred ------CCeEEEEeCCC
Confidence 36788887654
No 60
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.39 E-value=1.7e-06 Score=66.57 Aligned_cols=65 Identities=14% Similarity=0.014 Sum_probs=47.3
Q ss_pred CCccceEECCCCcEEEEECCC-C-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYF-G-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~-g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
+.|++|++|++|+.||++... + |+||++++.+++++... .........+|+|++.|+|+ |++.++
T Consensus 137 ~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~--~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 137 FGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE--SGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC--CCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred cCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec--CCCcccccCcceEEEeCCCCEEEEEcC
Confidence 458899999999999987644 4 99999964445555421 22233456799999999985 666666
No 61
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.37 E-value=4.6e-07 Score=70.10 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=49.9
Q ss_pred cCCCCccceEECCCCcEEEEECC-----------------C-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC
Q psy4774 9 QQCGRPLGMKFDKNGALHVADAY-----------------F-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD 70 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V~d~~-----------------~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~ 70 (120)
....+||.++++++|++||.+.. . .|+++++ +++++++. .+..||+|++++|
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~--------~l~~pNGia~spD 231 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE--------GFDFANGINISPD 231 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE--------EESSEEEEEECTT
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec--------CCcccCcceECCC
Confidence 34688999999999999998751 2 3999998 36666653 3678999999999
Q ss_pred C-CEEEEeCCC
Q psy4774 71 G-MVYWSDSST 80 (120)
Q Consensus 71 G-~iy~TDs~~ 80 (120)
| .+||+|+..
T Consensus 232 g~~lYvadt~~ 242 (355)
T 3sre_A 232 GKYVYIAELLA 242 (355)
T ss_dssp SSEEEEEEGGG
T ss_pred CCEEEEEeCCC
Confidence 8 799999964
No 62
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.36 E-value=4.4e-06 Score=61.25 Aligned_cols=62 Identities=19% Similarity=0.389 Sum_probs=49.8
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.+++++++|+||+++.. .+|+++|+++++...+.. . .-..|++++++++|++|+++..
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~---~----~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV---S----HKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE---C----SSSSEEEEEECTTSCEEEEECT
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee---C----CCCCcceEEECCCCcEEEEeCC
Confidence 356889999999999999876 459999998888776642 1 1245789999999999999875
No 63
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.36 E-value=9.6e-07 Score=65.95 Aligned_cols=77 Identities=16% Similarity=0.265 Sum_probs=55.0
Q ss_pred CCCccceEECCCC-cEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCCCCcccccce
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSSTKYKLYDGL 88 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~~~~~~~~~~ 88 (120)
+..|.+|+++++| .|||++. .|+++|++++++.... -... ....|.++++++ +|+||+++... |
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~----~~~~-~~~~p~gi~vdp~~g~lyva~~~~-y------ 289 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRP----FLEF-RDTKYYGLTVNPNNGEVYVADAID-Y------ 289 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSC----SBCC-CSSCEEEEEECTTTCCEEEEECTT-S------
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeee----eecC-CCCceEEEEEcCCCCeEEEEcccc-c------
Confidence 3579999999976 7888876 7999999888752110 0111 146799999998 68999999431 1
Q ss_pred ecceecCCceEEEEcCCC
Q psy4774 89 FDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 89 ~~~~~~~~G~l~~~d~~~ 106 (120)
...|+|++||+++
T Consensus 290 -----~~~~~V~v~d~~g 302 (328)
T 3dsm_A 290 -----QQQGIVYRYSPQG 302 (328)
T ss_dssp -----SSEEEEEEECTTC
T ss_pred -----ccCCEEEEECCCC
Confidence 1257888888776
No 64
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.34 E-value=3.1e-06 Score=62.17 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=48.4
Q ss_pred CCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...+.|++++++|+ ||+++.. .+|+++++ +|+.+++.. +-..|++++++++|++|+++..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~--------~~~~~~gl~~d~dG~l~v~~~~ 105 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLD--------ATAFTNGNAVDAQQRLVHCEHG 105 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEE--------SCSCEEEEEECTTSCEEEEETT
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeC--------CCCccceeeECCCCCEEEEECC
Confidence 45688999999997 8889876 45999998 577776652 2245899999999999999875
No 65
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.31 E-value=3.7e-06 Score=64.86 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC----CCEEEEeC
Q psy4774 10 QCGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD----GMVYWSDS 78 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~----G~iy~TDs 78 (120)
-...|.+|+++++|+|||++.. ..|+++++++|+.+.+.... .+.......+++|+++|+ |.||++.+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~-~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP-GVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT-TCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC-ceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 3578999999999999999984 44999998778877664321 122223557899999984 89999865
No 66
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.29 E-value=8.3e-06 Score=59.97 Aligned_cols=69 Identities=17% Similarity=0.254 Sum_probs=53.6
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
.+.|.+..+.++|+++|++...+ |+.+|+++|++.--... .+.++.++..|.++.+.++|++|++++..
T Consensus 164 ~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 164 SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA-NDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG-GGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC-CCCCCccccccccceEcCCCCEEEEeccC
Confidence 36799999999999999987654 99999987875322221 12345578889999999999999999854
No 67
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.21 E-value=6.2e-06 Score=62.90 Aligned_cols=89 Identities=7% Similarity=0.140 Sum_probs=57.1
Q ss_pred CCccceEECC----CCcEEEEECC--------CCEEEEECCCC-----cEEEEeccccccC--CCCCcCCCceEEcCCCC
Q psy4774 12 GRPLGMKFDK----NGALHVADAY--------FGLYKVNVTTG-----QTEQLISMDTEID--GAKPQIPNSVTVDSDGM 72 (120)
Q Consensus 12 g~P~Gl~~d~----~G~l~V~d~~--------~gi~~vd~~~g-----~~~~~~~~~~~~~--g~~~~~pndl~v~~~G~ 72 (120)
+.|+||++++ ++.|||++.. ..|++++.+.+ ..++++. ... ....+.+++|++++||.
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~---~~p~~~~~~h~~~~l~~~pdG~ 142 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFR---QMPKLSTGNHFGGRLVFDGKGY 142 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEE---CSSCCBSSSCCCCCEEECSSSE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEE---ECCCCCCCcccCccEEECCCCc
Confidence 5689999999 5899999753 24888876432 2344442 122 12456789999999999
Q ss_pred EEEEeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 73 VYWSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 73 iy~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
||||........ . ........|+|+|+++++
T Consensus 143 Lyv~~Gd~~~~~--~-~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 143 LFIALGENNQRP--T-AQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEEEECCTTCGG--G-GGCTTSCTTEEEEEETTS
T ss_pred EEEEECCCCCCC--c-cCCCCCCCeEEEEECCCC
Confidence 999975432100 0 001124568888888875
No 68
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.15 E-value=9.4e-06 Score=64.23 Aligned_cols=92 Identities=10% Similarity=0.196 Sum_probs=58.5
Q ss_pred CCccceEECC----CCcEEEEECC-------------CCEEEEECCC--Cc---EEEEeccccccCCCCCcCCCceEEcC
Q psy4774 12 GRPLGMKFDK----NGALHVADAY-------------FGLYKVNVTT--GQ---TEQLISMDTEIDGAKPQIPNSVTVDS 69 (120)
Q Consensus 12 g~P~Gl~~d~----~G~l~V~d~~-------------~gi~~vd~~~--g~---~~~~~~~~~~~~g~~~~~pndl~v~~ 69 (120)
+.++||++++ ++.|||+... ..|+|++.+. ++ .++++. .......+.+++|+|++
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~---~~p~~~~H~~~~l~f~p 153 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLA---GLPSSKDHQSGRLVIGP 153 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEE---EECCCSSCCEEEEEECT
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEE---cCCCCCCCCCCeEeECC
Confidence 5577999999 6899999752 3488886532 22 344543 22333567899999999
Q ss_pred CCCEEEEeCCCCcc-------ccc--ce-------ecceecCCceEEEEcCCC
Q psy4774 70 DGMVYWSDSSTKYK-------LYD--GL-------FDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 70 ~G~iy~TDs~~~~~-------~~~--~~-------~~~~~~~~G~l~~~d~~~ 106 (120)
||.||||-...... ..+ .. ........|+|+|+++++
T Consensus 154 DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG 206 (454)
T 1cru_A 154 DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG 206 (454)
T ss_dssp TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS
T ss_pred CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCC
Confidence 99999995432110 000 00 001123579999999987
No 69
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.13 E-value=1.5e-05 Score=59.40 Aligned_cols=65 Identities=12% Similarity=0.106 Sum_probs=49.1
Q ss_pred CCCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
...|.+|+++++|+|||++.. ..|.++|++++++...... .....+...|+++++ .++.||+++.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~--g~~~~~~~~p~~i~~-~~~~lyv~~~ 148 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC--PDMDMESGSTEQMVQ-YGKYVYVNCW 148 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC--TTCCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc--CCccccCCCcceEEE-ECCEEEEEcC
Confidence 578999999888999999944 5699999998876543321 111224567999999 5789999986
No 70
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.13 E-value=1.5e-05 Score=61.44 Aligned_cols=90 Identities=12% Similarity=0.137 Sum_probs=58.5
Q ss_pred CCCccceEECCC----CcEEEEEC---CCCEEEEECCCC--------cEEEEeccccccCCCCCcCCCceEEcCCCCEEE
Q psy4774 11 CGRPLGMKFDKN----GALHVADA---YFGLYKVNVTTG--------QTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYW 75 (120)
Q Consensus 11 ~g~P~Gl~~d~~----G~l~V~d~---~~gi~~vd~~~g--------~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~ 75 (120)
.+.|+||+++|+ |.|||+.. ...|+|+....+ +.++++. .......+..+.|++++||.|||
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~---~~p~~~~H~g~~l~fgpDG~Lyv 155 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFR---GIPKGVIHNGGRIAFGPDKMLYA 155 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEE---EECCCSSCCCCCEEECTTSCEEE
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEE---cCCCCCCccCccccCCCCCCEEE
Confidence 467899999984 89999853 245999976542 2455543 22333567789999999999999
Q ss_pred EeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 76 SDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 76 TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
|-....... .........|+|+|+++++
T Consensus 156 t~Gd~~~~~---~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 156 GTGESGDTG---LSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp ECBCTTCGG---GTTCTTCSTTCEEEECTTS
T ss_pred EECCCCCCc---cccCCCCCCCEEEEEeCCC
Confidence 954321100 0000123568888888876
No 71
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.13 E-value=1.9e-05 Score=58.76 Aligned_cols=63 Identities=22% Similarity=0.285 Sum_probs=45.6
Q ss_pred CCccceEECCCC-cEEEEECC-CCEEEEECC--CC-cE---EEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNG-ALHVADAY-FGLYKVNVT--TG-QT---EQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G-~l~V~d~~-~gi~~vd~~--~g-~~---~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..|+|++++++| .||+++.. ..|++++.+ +| ++ .++.. ..+ ....|+++++|++|+||+++..
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~----~~~-~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID----STG-IKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE----CTT-SSSEEEEEEECTTSCEEEEEET
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE----CCC-CCCCCCeeEECCCCCEEEEEeC
Confidence 568999999999 48999876 459999864 56 42 23332 111 2246799999999999999853
No 72
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.12 E-value=3.8e-06 Score=64.26 Aligned_cols=66 Identities=14% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC----CCEEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD----GMVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~----G~iy~TDs~ 79 (120)
....|.+|+++++|+|||++....|+++++ +|+ +++... .........|++|+++++ |.||++++.
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~--~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERPGRLVLISP-SGK-KLVASF--DVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETTTEEEEECS-SCE-EEEEEC--CCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-eEeecc--ceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 357899999999999999998766999986 577 666532 111123456899999996 899999873
No 73
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.09 E-value=1.2e-05 Score=63.59 Aligned_cols=70 Identities=10% Similarity=0.249 Sum_probs=51.2
Q ss_pred CCCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCC-CCCcCCCceEEcC----CCCEEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDG-AKPQIPNSVTVDS----DGMVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g-~~~~~pndl~v~~----~G~iy~TDs~ 79 (120)
....|.+|+++++|+|||++...+ |+++++++|+.+++......... .....+.+|+++| +|.||++++.
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 357899999999999999998754 99999877888777642111100 0123456999999 7899999973
No 74
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.08 E-value=2e-05 Score=58.38 Aligned_cols=67 Identities=19% Similarity=0.302 Sum_probs=48.9
Q ss_pred CCccceEECCC-CcEEEEECC-CCEEEEECCCCcEEEEeccccccCC--CCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKN-GALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDG--AKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~-G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g--~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..+.||++|+. |+|||.... +-|+.+|.+ |++...........| ..+..|.||++|++|+||++.-.
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 45889999998 689998665 559999985 665555443212222 24778999999999999999543
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.90 E-value=8.5e-05 Score=55.27 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=43.5
Q ss_pred CCccceEECCCCcEEEEECC---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+|.||+++++|.||++... ..|.++|+++|++..-.. .+..+ ++-+++++. +.||+++..
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~----l~~~~--fgeGi~~~g-~~lyv~t~~ 84 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK----MDDSY--FGEGLTLLN-EKLYQVVWL 84 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE----CCTTC--CEEEEEEET-TEEEEEETT
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe----cCCCc--ceEEEEEeC-CEEEEEEec
Confidence 35789999998999999753 349999999998654432 22223 345777773 588888764
No 76
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.88 E-value=0.00013 Score=53.01 Aligned_cols=68 Identities=18% Similarity=0.323 Sum_probs=46.9
Q ss_pred CCCccceEECCCCc-EEEEECCC-CEEEEECCCCcEEEEeccccccC--CCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAYF-GLYKVNVTTGQTEQLISMDTEID--GAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~--g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
...|.+++++++|+ +||++... .|..+|++++++........... ......|++++++++|+ +|+++.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 46799999999996 89998764 48999998887644432110000 01122478999999985 899884
No 77
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.88 E-value=2.6e-05 Score=63.99 Aligned_cols=64 Identities=19% Similarity=0.317 Sum_probs=50.5
Q ss_pred cCCCCccceEECCCCcEEE-EECC------------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEE
Q psy4774 9 QQCGRPLGMKFDKNGALHV-ADAY------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVY 74 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V-~d~~------------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy 74 (120)
.....|.+|+||++|+||+ .|.. ++++++++++|++..++. +..+..||+++++||+ .||
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~------~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV------GPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE------CCTTCEEEEEEECTTSSEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe------CCCCccccCCEECCCCCEEE
Confidence 3568899999999999999 5653 259999998899998873 2234568999999998 577
Q ss_pred EEeC
Q psy4774 75 WSDS 78 (120)
Q Consensus 75 ~TDs 78 (120)
|+-.
T Consensus 547 V~vQ 550 (592)
T 4a9v_A 547 VGIQ 550 (592)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.84 E-value=0.0003 Score=50.92 Aligned_cols=70 Identities=14% Similarity=0.193 Sum_probs=49.4
Q ss_pred CCCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccc--cCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTE--IDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~--~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
....|.+++++++|+ ||++... ..|..+|.++++++.+...... ....+....+.++++++|. ||++...
T Consensus 219 ~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 219 TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 346789999999997 7887664 3488899988887555332111 2233444458899999985 8888875
No 79
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.79 E-value=0.00018 Score=52.81 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=46.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECC-CCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVT-TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSST 80 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~-~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~~ 80 (120)
..|.+++++++|++|+++...+ |..++.+ +|++..+... ....-..|+.++++++|. +|+++...
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~----~~~~g~~p~~~~~spdg~~l~v~~~~~ 208 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVL----TMEAGFGPRHLVFSPDGQYAFLAGELS 208 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEE----ECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeE----EcCCCCCCceEEECCCCCEEEEEeCCC
Confidence 4577899999999999988755 6666655 6776655321 111223578999999997 99988754
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.79 E-value=0.00017 Score=52.41 Aligned_cols=66 Identities=17% Similarity=0.262 Sum_probs=47.8
Q ss_pred CCCccceEECCCCc-EEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
...|.+++++++|+ ||+++....|+.+|.++++....... ....+...+++++++++|+ +|+++..
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL---LDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC---CCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc---CCCCCCcccceEEECCCCCEEEEEeCC
Confidence 34599999999985 77776655699999988876544321 1112445678999999986 8999875
No 81
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.78 E-value=8e-05 Score=55.41 Aligned_cols=63 Identities=17% Similarity=0.119 Sum_probs=44.2
Q ss_pred CccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.||+.| .++|||++....|..+|+++.++..-... ...+.++..||.+.+. +|.||++...
T Consensus 108 ~g~glt~D-g~~l~vs~gs~~l~viD~~t~~v~~~I~V--g~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 108 DGWGLATD-GKILYGSDGTSILYEIDPHTFKLIKKHNV--KYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp SCCEEEEC-SSSEEEECSSSEEEEECTTTCCEEEEEEC--EETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CeEEEEEC-CCEEEEECCCCeEEEEECCCCcEEEEEEE--CCCCcccccceeEEEE-CCEEEEecCC
Confidence 34445554 24899998656699999988765433321 2245678889999988 7899999864
No 82
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.78 E-value=2.6e-05 Score=59.39 Aligned_cols=67 Identities=10% Similarity=0.019 Sum_probs=47.4
Q ss_pred CCCccceEECCCCc-EEEEECCCCEEEEECCCCcEE-EEeccccccCCCCCcCCCceEEcC----CCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAYFGLYKVNVTTGQTE-QLISMDTEIDGAKPQIPNSVTVDS----DGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~~gi~~vd~~~g~~~-~~~~~~~~~~g~~~~~pndl~v~~----~G~iy~TDs~ 79 (120)
...|.+|+++++|+ |||++....|++++++ |+.. ++.... ...-.....+++|+++| +|.||++++.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 57899999999999 9999986569999974 6543 233210 11111234578999999 5899999864
No 83
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.71 E-value=0.00016 Score=57.00 Aligned_cols=65 Identities=11% Similarity=-0.054 Sum_probs=46.9
Q ss_pred cCCCCccceEECCCC-cEEEEECC----------CCEEEEECCCCcEEEEeccccccC-CCC---CcCCCceEEcCCC-C
Q psy4774 9 QQCGRPLGMKFDKNG-ALHVADAY----------FGLYKVNVTTGQTEQLISMDTEID-GAK---PQIPNSVTVDSDG-M 72 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G-~l~V~d~~----------~gi~~vd~~~g~~~~~~~~~~~~~-g~~---~~~pndl~v~~~G-~ 72 (120)
+.+..| ||++++|| .|||++.. ..|..||..++++..-. ... ..+ ...|.++++++|| .
T Consensus 116 ~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I----~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 116 DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADI----ELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE----EETTCCCCCBSCCGGGSEECTTSSE
T ss_pred ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEE----ECCCccccccCCCcceEEEcCCCCE
Confidence 345679 99999999 79999752 34999999888754322 122 112 2568999999998 6
Q ss_pred EEEEeC
Q psy4774 73 VYWSDS 78 (120)
Q Consensus 73 iy~TDs 78 (120)
+|+++.
T Consensus 191 lyV~n~ 196 (426)
T 3c75_H 191 LLFYQF 196 (426)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999975
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.70 E-value=0.00042 Score=51.17 Aligned_cols=62 Identities=13% Similarity=0.188 Sum_probs=44.5
Q ss_pred CCccceEECCCCc-EEEEECC-CC---EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDKNGA-LHVADAY-FG---LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~-l~V~d~~-~g---i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
..|.+++++++|+ ||+++.. .+ |+.+++++|+.+.+... .. -..|.+++++++|. ||+++..
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~----~~--g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ----LT--GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE----EC--SSCCCEEEECTTSCEEEEEETT
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe----cC--CCCCceEEECCCCCEEEEEECC
Confidence 3467999999996 7788765 44 55566667887766532 11 24688999999996 8888864
No 85
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.69 E-value=0.00017 Score=53.70 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=45.3
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.+.|++.|. +.||++|....|..+|+++.++..-... ..+|.++..+|.+... +|.||+....
T Consensus 127 ~eG~glt~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V--~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 127 GEGWGLTHND-QYLIMSDGTPVLRFLDPESLTPVRTITV--TAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp SCCCCEEECS-SCEEECCSSSEEEEECTTTCSEEEEEEC--EETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CCceEEecCC-CEEEEECCCCeEEEEcCCCCeEEEEEEe--ccCCccccccceeEEE-CCEEEEEEcc
Confidence 4556777763 5899998656699999988765433321 2356788888888877 7899988764
No 86
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.69 E-value=0.00042 Score=50.18 Aligned_cols=63 Identities=22% Similarity=0.372 Sum_probs=45.7
Q ss_pred CCCccceEECCCCc-EEEEECCCC-EEEEECCCCcE-EEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAYFG-LYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~~g-i~~vd~~~g~~-~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
...|.+++++++|+ ||++....+ |..+|.++++. ..+.. ... -..|.+++++++|. ||++...
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~----~~~--~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA----VGT--NNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE----EEC--SSCCCCEEECTTSSEEEEECSS
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee----ccC--CCCCceEEECCCCCEEEEEEcC
Confidence 46799999999996 889887644 88889887774 11211 111 14678999999997 8888764
No 87
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.68 E-value=0.00039 Score=51.37 Aligned_cols=68 Identities=15% Similarity=0.260 Sum_probs=48.0
Q ss_pred CCCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
....|.+++|+++|+ ||+++.. ..|..++.++|+++.+... ......+..|+++++++||. ||+++..
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~--~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV--AADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE--ESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE--ecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 356788999999996 7888855 4477777667776655432 11122345678999999996 8898876
No 88
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.65 E-value=0.00017 Score=52.97 Aligned_cols=65 Identities=17% Similarity=0.175 Sum_probs=47.7
Q ss_pred CCCCccceEECCCCcEEEEECC---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGALHVADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
....|.+++++++|+||+++.. ..|+.++.++|+.+.+... .. ....|+.++++++|. ||+++..
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~--~~---~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTV--VA---PGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEE--EE---ESCCCSEEEEETTTTEEEEEETT
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeee--ec---CCCCCEEEEECCCCCEEEEEeCC
Confidence 3578999999999999988753 3487888777776666431 11 234589999999997 8888753
No 89
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.65 E-value=0.00022 Score=53.33 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=47.8
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.+.||+.|. +.||++|....|..+|+++.++..-... ...+.++..+|.|... +|.||++...
T Consensus 135 ~~eGwGLt~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V--~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 135 SGEGWGLCYWN-GKLVRSDGGTMLTFHEPDGFALVGAVQV--KLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp SSCCCCEEEET-TEEEEECSSSEEEEECTTTCCEEEEEEC--EETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CCceeEEecCC-CEEEEECCCCEEEEEcCCCCeEEEEEEe--CCCCcccccccccEEe-CCEEEEEECC
Confidence 34567888774 4899998656699999998775433321 2356788888999988 7899998865
No 90
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.62 E-value=0.0004 Score=54.18 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=57.7
Q ss_pred CccceEEC-CCCcEEEEECC-CCEEEEECCC-----CcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccc
Q psy4774 13 RPLGMKFD-KNGALHVADAY-FGLYKVNVTT-----GQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLY 85 (120)
Q Consensus 13 ~P~Gl~~d-~~G~l~V~d~~-~gi~~vd~~~-----g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~ 85 (120)
...|+++| .+|.||+++.. +.|.+.++++ +..++++. +. ++.+|+++.++.+|.|||+-++ ++.
T Consensus 276 ~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~-----d~-~l~~pd~~~i~~~g~Lwv~sn~--l~~- 346 (381)
T 3q6k_A 276 DAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT-----SS-RFVFGTDISVDSKGGLWFMSNG--FPP- 346 (381)
T ss_dssp CEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE-----CT-TCCSEEEEEECTTSCEEEEECS--CCS-
T ss_pred CcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEE-----CC-CccccCeEEECCCCeEEEEECc--chH-
Confidence 34578897 78999999987 5699999864 35577763 33 8999999999999999999886 221
Q ss_pred cceec---ceecCCceEEEE
Q psy4774 86 DGLFD---GLTSGSGSFIKI 102 (120)
Q Consensus 86 ~~~~~---~~~~~~G~l~~~ 102 (120)
++.. .....+=||+|.
T Consensus 347 -~~~g~l~d~~~~nfrI~r~ 365 (381)
T 3q6k_A 347 -IRKSEKFKYDFPRYRLMRI 365 (381)
T ss_dssp -STTGGGCCCSSCSEEEEEE
T ss_pred -hhcCCcCCCCcCCEEEEEe
Confidence 2221 123455677776
No 91
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.52 E-value=9e-05 Score=54.40 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=39.7
Q ss_pred CccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEE
Q psy4774 13 RPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 76 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~T 76 (120)
.-.-|+|+|+|.||++ ....++++++.+++-..++...+.+...-.+.-..+.+|++|.||..
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV 104 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe
Confidence 3457999999999999 32349999986633222222111111001222468999999999988
No 92
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.49 E-value=0.00061 Score=50.11 Aligned_cols=65 Identities=17% Similarity=0.078 Sum_probs=47.5
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.+.||+.| .++||++|....|..+|+++.++..-... ..++.++..+|.+... +|.||+....
T Consensus 104 ~~~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V--~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 104 PGEGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKV--TAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp SSCCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEEC--EETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CCCceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEE--ccCCcccccceeeEEe-CCEEEEEECC
Confidence 3566788776 35899999766699999988765433321 2356788888988877 7899988864
No 93
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.00068 Score=55.88 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=50.1
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....|+.|++|+|||+....||+++++++++.+.+.. ..+.+-+..+.|..|++|+||++-..
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~----~~~l~~~~i~~i~~d~~g~lWi~T~~ 558 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQ----YEGFCSNTINQIYRSSKGQMWLATGE 558 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECT----TTTCSCSCEEEEEECTTSCEEEEETT
T ss_pred ceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccC----CCCCCCCeeEEEEECCCCCEEEEECC
Confidence 45678999999999999877899999998777766642 23444455678999999999998654
No 94
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.42 E-value=0.00088 Score=52.27 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=48.1
Q ss_pred CCCccceEECCCCcEEEEECC-------------CC---EEEEECCCC--cEEEEeccccccCCCCCcCCCceEEc-C--
Q psy4774 11 CGRPLGMKFDKNGALHVADAY-------------FG---LYKVNVTTG--QTEQLISMDTEIDGAKPQIPNSVTVD-S-- 69 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~-------------~g---i~~vd~~~g--~~~~~~~~~~~~~g~~~~~pndl~v~-~-- 69 (120)
.-...++.+|+.|+|||.|.+ .+ |+.+|.+++ ++........+.- .+-.+.|+|+|| .
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~-~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV-EKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC-CCGGGEEEEEEEESCT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc-ccCCccceEEEecccC
Confidence 345779999999999999965 12 889999988 6543332211111 133567999999 2
Q ss_pred -----CCCEEEEeCCC
Q psy4774 70 -----DGMVYWSDSST 80 (120)
Q Consensus 70 -----~G~iy~TDs~~ 80 (120)
++.+|+||+..
T Consensus 165 ~~~c~~~~aYItD~~~ 180 (381)
T 3q6k_A 165 KGDCSETFVYITNFLR 180 (381)
T ss_dssp TTTSCSEEEEEEETTT
T ss_pred CCCCCccEEEEEcCCC
Confidence 46899999963
No 95
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.40 E-value=0.0017 Score=46.94 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=42.0
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....++++++|+||++....+|++++++ |+...-.. .+. ..++.++++++|+||++...
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g~~~~~~~-----~~~--~~~~~~~~~~~g~l~v~t~~ 274 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINPD-GTEKWRFK-----TGK--RIESSPVIGNTDTIYFGSYD 274 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECTT-SCEEEEEE-----CSS--CCCSCCEECTTSCEEEECTT
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECCC-CCEeEEee-----CCC--CccccceEcCCCeEEEecCC
Confidence 44678999999999999877789999874 54322211 111 23456788888999988775
No 96
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.38 E-value=0.00054 Score=52.87 Aligned_cols=65 Identities=8% Similarity=-0.137 Sum_probs=47.3
Q ss_pred cCCCCccceEECCCC-cEEEEECC----------CCEEEEECCCCcEEEEeccccccC-CCC---CcCCCceEEcCCC-C
Q psy4774 9 QQCGRPLGMKFDKNG-ALHVADAY----------FGLYKVNVTTGQTEQLISMDTEID-GAK---PQIPNSVTVDSDG-M 72 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G-~l~V~d~~----------~gi~~vd~~~g~~~~~~~~~~~~~-g~~---~~~pndl~v~~~G-~ 72 (120)
+.+..| |++++++| .+|||+.. .-|..||+.++++..-. ... +.+ ...|..+++++|| .
T Consensus 63 ~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I----~v~~~~~~~~g~~P~~ia~SpDGk~ 137 (368)
T 1mda_H 63 LGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI----ELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp EECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE----EETTSCSCCBSCCTTSEEECTTSSC
T ss_pred eCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE----ECCCccccccCCCcceEEEcCCCCE
Confidence 345679 99999998 89999741 23999999888754332 122 112 2579999999998 7
Q ss_pred EEEEeC
Q psy4774 73 VYWSDS 78 (120)
Q Consensus 73 iy~TDs 78 (120)
+|+++.
T Consensus 138 lyVan~ 143 (368)
T 1mda_H 138 LLFFLF 143 (368)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 999975
No 97
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.35 E-value=0.00053 Score=51.01 Aligned_cols=67 Identities=9% Similarity=0.154 Sum_probs=48.0
Q ss_pred CccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEecccccc-----CCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 13 RPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEI-----DGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~-----~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
.++.|.+. +|+||+.... ..|.+||+++|++.-..+...-. .......||+||++++ .++|+|.-.+
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 34567776 7899988754 56999999999987666531100 1123457899999997 5899998874
No 98
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.34 E-value=0.0023 Score=46.78 Aligned_cols=60 Identities=13% Similarity=0.091 Sum_probs=45.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
..|.+++++++|+++|++...+ |+.+|++ |+..--.. .. ..|.++.+.++|+++++++..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~----~~----~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK----LS----GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE----CS----SCCCEEEECTTSCEEEECBTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEE----CC----CCccceeEcCCCCEEEEeCCC
Confidence 3578899999999999988755 8889997 76432221 11 346789999999999998863
No 99
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.34 E-value=0.0014 Score=54.09 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=48.4
Q ss_pred CccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....|..|++|+|||+... ||+++++++++.+.+. ..+|-+-+..+.++.|++|+|||+-..
T Consensus 544 ~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~~~~~----~~~gl~~~~i~~i~~d~~g~lWi~t~~ 605 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIKRYN----TTNGLPNNVVYGILEDSFGRLWLSTNR 605 (795)
T ss_dssp CEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEEC----GGGTCSCSCEEEEEECTTSCEEEEETT
T ss_pred eeEEEEECCCCCEEEEeCC-CceeECCCCCcEEEeC----CCCCCchhheEEEEECCCCCEEEEcCC
Confidence 4457899999999999775 9999999877766653 334545455678999999999998764
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.29 E-value=0.0019 Score=46.64 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=42.4
Q ss_pred ccceEECCCCcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
+.|+++.+++.+||+.... .|..+|.++++...... . + ....|+.++++++|. +|++...
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~----~-~-~~~~~~~~~~s~dg~~~~v~~~~ 63 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV----M-P-DKFGPGTAMMAPDNRTAYVLNNH 63 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE----C-S-SCCSSCEEEECTTSSEEEEEETT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe----c-C-CCCCCceeEECCCCCEEEEEeCC
Confidence 3578889999999987664 49999998887543332 1 1 112478999999996 8888764
No 101
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.28 E-value=0.0029 Score=48.28 Aligned_cols=64 Identities=8% Similarity=-0.094 Sum_probs=43.9
Q ss_pred CCCCccceEECCCC-cEEEEECC----------CCEEEEECCCCcEEEEeccccccC-CCC---CcCCCceEEcCCC-CE
Q psy4774 10 QCGRPLGMKFDKNG-ALHVADAY----------FGLYKVNVTTGQTEQLISMDTEID-GAK---PQIPNSVTVDSDG-MV 73 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G-~l~V~d~~----------~gi~~vd~~~g~~~~~~~~~~~~~-g~~---~~~pndl~v~~~G-~i 73 (120)
.+..| +|++.+|| .|||++.. ..|..+|++++++..-.. .. ..+ ...|.++++++|| .|
T Consensus 65 ~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~----~~~~~~~~~g~~p~~~~~spDG~~l 139 (373)
T 2mad_H 65 GGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE----LPDAPRFDVGPYSWMNANTPNNADL 139 (373)
T ss_pred CCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE----CCCccccccCCCccceEECCCCCEE
Confidence 34568 99999999 68999742 237889987765432221 11 111 2468999999998 69
Q ss_pred EEEeC
Q psy4774 74 YWSDS 78 (120)
Q Consensus 74 y~TDs 78 (120)
|++..
T Consensus 140 ~v~n~ 144 (373)
T 2mad_H 140 LFFQF 144 (373)
T ss_pred EEEec
Confidence 99874
No 102
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.25 E-value=0.0039 Score=44.69 Aligned_cols=64 Identities=14% Similarity=0.108 Sum_probs=44.5
Q ss_pred CCCCccceEECCCCc-EEEEECC-CCEEE--EECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGA-LHVADAY-FGLYK--VNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~-l~V~d~~-~gi~~--vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
..+.|.+++++++|+ ||++... ..|.. +++++++.+.+... .... .|..++++++|. ||+++..
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~s~dg~~l~~~~~~ 104 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES----ALPG--SLTHISTDHQGQFVFVGSYN 104 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE----ECSS--CCSEEEECTTSSEEEEEETT
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc----ccCC--CCcEEEEcCCCCEEEEEecC
Confidence 346799999999996 7877765 33444 45447777666432 1111 689999999997 8888763
No 103
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.24 E-value=0.0034 Score=44.87 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=44.2
Q ss_pred CccceEECCCC-cEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEe
Q psy4774 13 RPLGMKFDKNG-ALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSD 77 (120)
Q Consensus 13 ~P~Gl~~d~~G-~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TD 77 (120)
.|.+++++++| .+|++.... .|..+|.++++....... ...+..-..|.+++++++| .||+++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL--STPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC--CBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc--CCcccccccccceEECCCCCEEEEEe
Confidence 69999999999 578887764 499999888876443321 1111011257899999998 688886
No 104
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.24 E-value=0.0007 Score=50.55 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=48.6
Q ss_pred CccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccc---c---CCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 13 RPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTE---I---DGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~---~---~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
.++.|.+. +|+||+.... ..|.+||+++|++.-..+...- . ...+..-+|+||.+++ +++|+|.-.+
T Consensus 182 ~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 182 LINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred cccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 45677777 7899988754 5599999999998766653210 0 1113457899999996 6899998874
No 105
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.20 E-value=0.00079 Score=53.49 Aligned_cols=92 Identities=20% Similarity=0.309 Sum_probs=56.7
Q ss_pred CCccceEECCC----CcEEEEECC-------------CCEEEEECCCC--------cEEEEeccccccCCCCCcCCCceE
Q psy4774 12 GRPLGMKFDKN----GALHVADAY-------------FGLYKVNVTTG--------QTEQLISMDTEIDGAKPQIPNSVT 66 (120)
Q Consensus 12 g~P~Gl~~d~~----G~l~V~d~~-------------~gi~~vd~~~g--------~~~~~~~~~~~~~g~~~~~pndl~ 66 (120)
+.++||+++|+ +.|||+-.. ..|+|+....+ +.++|+.. . ....-+....|+
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~--~-~~~~~H~g~~l~ 145 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEV--A-ELHRKHLGGQLL 145 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEE--E-ESSSSSCEEEEE
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEc--C-CCCCcccCCcEe
Confidence 56789999996 899998431 24777654321 23555542 1 122446678999
Q ss_pred EcCCCCEEEEeCCCCcccccce-ecceecCCceEEEEcCCC
Q psy4774 67 VDSDGMVYWSDSSTKYKLYDGL-FDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 67 v~~~G~iy~TDs~~~~~~~~~~-~~~~~~~~G~l~~~d~~~ 106 (120)
|++||.||||-........... ...+....|.|+|+|+++
T Consensus 146 fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 146 FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDT 186 (463)
T ss_dssp ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCC
T ss_pred ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCC
Confidence 9999999999654321100000 011245679999999886
No 106
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.18 E-value=0.0023 Score=47.74 Aligned_cols=66 Identities=23% Similarity=0.235 Sum_probs=46.0
Q ss_pred CCCccceEECCCCc-EEEEECC-CCEEEEECC-CCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAY-FGLYKVNVT-TGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~-~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs~ 79 (120)
...|.+++++++|+ ||+++.. ..|..++.+ +|+++.+... ... ..-..|..++++++| .||+++..
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~--~~~-~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV--DAP-DPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE--ECS-STTCCEEEEEECTTSSEEEEEETT
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE--ecC-CCCCCCCEeEECCCCCEEEEEECC
Confidence 46799999999995 7888865 447777776 7877654321 111 012458899999999 58888763
No 107
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.13 E-value=0.0018 Score=53.38 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=49.6
Q ss_pred CccceEECCCCcEEEEECCCCE-EEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFGL-YKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~gi-~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
....|..|++|+||++.. .|+ .++|+++++.+.+. ..+|-+-+..+.++.|++|+|||+-...
T Consensus 540 ~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~----~~~gl~~~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQ----RKEGLPNTHIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp CEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEEC----GGGTCSCCCCCEEEECSSSCEEEECSSC
T ss_pred eeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEcc----ccCCCCCceEEEEEECCCCCEEEEcCCc
Confidence 345789999999999977 788 99999888766663 3355555567899999999999997643
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.07 E-value=0.0014 Score=48.15 Aligned_cols=67 Identities=10% Similarity=0.215 Sum_probs=47.6
Q ss_pred CccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccC------CCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 13 RPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEID------GAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~------g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
.++.|... +|+||+.... ..|.+||+++|++.-......-.+ .....-+|+||.+++ +++|+|.-.+
T Consensus 151 ~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 151 NLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred cceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 44566665 7899988754 569999999999876665321111 113457899999996 6899998874
No 109
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.04 E-value=0.0042 Score=48.41 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=45.3
Q ss_pred cCCCCccceEECCCC-cEEEEECC----------CCEEEEECCCCcEEEEeccccccCCCC---CcCCCceEEcCCC-CE
Q psy4774 9 QQCGRPLGMKFDKNG-ALHVADAY----------FGLYKVNVTTGQTEQLISMDTEIDGAK---PQIPNSVTVDSDG-MV 73 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G-~l~V~d~~----------~gi~~vd~~~g~~~~~~~~~~~~~g~~---~~~pndl~v~~~G-~i 73 (120)
+.+..| +++++++| .|||++.. ..|..+|.+++++.--... ..|.+ -..|..+++++|| .+
T Consensus 76 ~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v---~~g~r~~~g~~P~~~a~spDGk~l 151 (386)
T 3sjl_D 76 DGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIEL---PDAPRFLVGTYPWMTSLTPDGKTL 151 (386)
T ss_dssp EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE---TTCCCCCBSCCGGGEEECTTSSEE
T ss_pred ECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEEC---CCccccccCCCCceEEEcCCCCEE
Confidence 345668 49999999 68999741 2388899988775322211 11122 2468999999998 59
Q ss_pred EEEeC
Q psy4774 74 YWSDS 78 (120)
Q Consensus 74 y~TDs 78 (120)
|+++.
T Consensus 152 yVan~ 156 (386)
T 3sjl_D 152 LFYQF 156 (386)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99975
No 110
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.02 E-value=0.0021 Score=48.44 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=43.5
Q ss_pred CCCccceEECCCC-cEEEEECC----------CCEEEEECCCCcEEEEeccccccCCCC---CcCCCceEEcCCC-CEEE
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAY----------FGLYKVNVTTGQTEQLISMDTEIDGAK---PQIPNSVTVDSDG-MVYW 75 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~----------~gi~~vd~~~g~~~~~~~~~~~~~g~~---~~~pndl~v~~~G-~iy~ 75 (120)
+..| +++++++| .|||++.. ..|..+|.+++++..-.. ..... -..|.+++++++| .||+
T Consensus 50 g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~----~~~~~~~~g~~p~~i~~spdg~~l~v 124 (361)
T 2oiz_A 50 AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS----LPPKRVQGLNYDGLFRQTTDGKFIVL 124 (361)
T ss_dssp CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE----ECTTBCCBCCCGGGEEECTTSSEEEE
T ss_pred CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE----cCccccccCCCcceEEECCCCCEEEE
Confidence 4568 99999999 68998741 128889987776532221 11111 2568999999998 5998
Q ss_pred EeC
Q psy4774 76 SDS 78 (120)
Q Consensus 76 TDs 78 (120)
++.
T Consensus 125 ~n~ 127 (361)
T 2oiz_A 125 QNA 127 (361)
T ss_dssp EEE
T ss_pred ECC
Confidence 874
No 111
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.95 E-value=0.0085 Score=45.69 Aligned_cols=70 Identities=20% Similarity=0.253 Sum_probs=47.5
Q ss_pred Cccc---eEECCCC-cEEEEEC----------CCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC--EEEE
Q psy4774 13 RPLG---MKFDKNG-ALHVADA----------YFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM--VYWS 76 (120)
Q Consensus 13 ~P~G---l~~d~~G-~l~V~d~----------~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~--iy~T 76 (120)
+|.| ++++++| +|||+.. ...|+.||.+++++..-.. ..+ .|+++++++||. +|++
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~----~g~----~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS----LGH----DVDAISVAQDGGPDLYAL 336 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE----CCC----CcCeEEECCCCCeEEEEE
Confidence 5777 8999986 8899743 1349999998876532221 122 489999999997 5554
Q ss_pred eCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 77 DSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 77 Ds~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
... .+.|..||..+
T Consensus 337 ~~~----------------~~~V~ViD~~t 350 (373)
T 2mad_H 337 SAG----------------TEVLHIYDAGA 350 (373)
T ss_pred cCC----------------CCeEEEEECCC
Confidence 432 35677777665
No 112
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.93 E-value=0.0096 Score=42.60 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=40.6
Q ss_pred CccceEECCCC-cEEEEECCCC-EEEEECC--CCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 13 RPLGMKFDKNG-ALHVADAYFG-LYKVNVT--TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G-~l~V~d~~~g-i~~vd~~--~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
.|.+++++++| .||++....+ |..++.+ +++.+.+... ... ..|.+++++++|+ ||+++..
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~----~~~--~~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ----PTE--TQPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE----ECS--SSCCCEEECTTSSEEEEECTT
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee----cCC--CccceEEECCCCCEEEEecCC
Confidence 45579999999 5677775544 6666654 5566555421 111 1288999999996 8888754
No 113
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.80 E-value=0.013 Score=42.06 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=27.6
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
...+.+|++|+|||+. .+|+++|+ +|+...-.. . +-.....++++++|+||++..
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d~-~g~~~~~~~----~---~~~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAINP-DGTEKWNFY----A---GYWTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEECT-TSCEEEEEC----C---SSCCCSCCEECTTSCEEEEET
T ss_pred eeeeEEcCCCEEEEEe--CEEEEECC-CCcEEEEEc----c---CCcceeceEECCCCeEEEEcC
Confidence 3445566666666655 55666663 443221111 0 112345666666666666654
No 114
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.72 E-value=0.018 Score=41.04 Aligned_cols=57 Identities=12% Similarity=0.129 Sum_probs=42.1
Q ss_pred CccceEECCCC-cEEEEE------------CCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 13 RPLGMKFDKNG-ALHVAD------------AYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 13 ~P~Gl~~d~~G-~l~V~d------------~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
.|.+++++++| .||+++ ....|..+|.++++...... . + ..|++++++++|. ||+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~----~-~---~~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE----A-P---RQITMLAWARDGSKLYGLG 153 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE----C-C---SSCCCEEECTTSSCEEEES
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe----C-C---CCcceeEECCCCCEEEEeC
Confidence 78999999999 678885 23558999988776544332 1 2 2478999999986 88884
No 115
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.62 E-value=0.0098 Score=49.04 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=47.5
Q ss_pred CccceEECCCCc-EEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGA-LHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~-l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....|+.|++|+ |||+....||.++++++++.+.+.. .....+-+....+..|++|+||+.-..
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~---~~~~l~~~~v~~i~~d~~g~lwigt~~ 471 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQ---RNSQLVNENVYAILPDGEGNLWLGTLS 471 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECT---TTSCCSCSCEEEEEECSSSCEEEEESS
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeec---CCCCcCCCeeEEEEECCCCCEEEEecC
Confidence 345788899999 9999877899999998888777642 111122344568889999999998653
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.56 E-value=0.024 Score=41.67 Aligned_cols=61 Identities=18% Similarity=0.377 Sum_probs=44.4
Q ss_pred CCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
...+.++++.++|+ ||++... ..|..+|.++++...... .+ ..++.++++++|. ||++.+.
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----~~---~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----TG---KSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----CS---SSEEEEEECTTSSEEEEEETT
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-----CC---CCcceEEECCCCCEEEEEeCC
Confidence 34788999999996 6777765 448889998887654432 11 1368999999986 7788774
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.55 E-value=0.017 Score=42.50 Aligned_cols=60 Identities=23% Similarity=0.413 Sum_probs=43.7
Q ss_pred CCccceEECCCCc-EEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDKNGA-LHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~-l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
..|.++++.++|+ ||++.... .|..+|.++++...... ... .++.++++++|. ||++.+.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~----~~~----~v~~~~~spdg~~l~~~~~~ 94 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP----AGS----SPQGVAVSPDGKQVYVTNMA 94 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE----CSS----SEEEEEECTTSSEEEEEETT
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE----CCC----CccceEECCCCCEEEEEECC
Confidence 4588999999996 56776554 48888988887654432 111 578999999986 8888764
No 118
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.47 E-value=0.011 Score=48.45 Aligned_cols=61 Identities=23% Similarity=0.290 Sum_probs=44.9
Q ss_pred ccceEECCCCcEEEE-ECCCCEEEEECCCCcEEEEeccccccCCC-CCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVA-DAYFGLYKVNVTTGQTEQLISMDTEIDGA-KPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~-d~~~gi~~vd~~~g~~~~~~~~~~~~~g~-~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|..|++|+|||+ -...||+++|+++++.+.+.. ++. .-..++.+..|++|+||++-..
T Consensus 474 i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~-----~~~~~~~~~~~i~~d~~g~lWigt~~ 536 (758)
T 3ott_A 474 INQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFA-----DELTGEKSPNYLLCDEDGLLWVGFHG 536 (758)
T ss_dssp EEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECT-----TTSCGGGCEEEEEECTTSCEEEEETT
T ss_pred eeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecC-----CCcCCCcccceEEECCCCCEEEEecC
Confidence 456899999999993 334789999998887776632 111 1235678999999999998653
No 119
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.47 E-value=0.021 Score=40.99 Aligned_cols=64 Identities=16% Similarity=0.249 Sum_probs=44.1
Q ss_pred CccceEECCCCc-EEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEe
Q psy4774 13 RPLGMKFDKNGA-LHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSD 77 (120)
Q Consensus 13 ~P~Gl~~d~~G~-l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TD 77 (120)
.|.++++.++|+ +|++.... .|..+|.++++........ ...+..-..|++++++++| .||++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS-SVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC-CSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc-cccccccccccceEECCCCCEEEEEc
Confidence 689999999996 78887654 4899999888765433210 0000113458999999998 477777
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.43 E-value=0.0068 Score=45.30 Aligned_cols=67 Identities=16% Similarity=0.164 Sum_probs=47.7
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...|.++++.+++.++++....+ |..+|.++++....... .........++.++++++|.+|++.+.
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~s~~~ 189 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP--EKYKKKLGFVETISIPEHNELWVSQMQ 189 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC--HHHHTTCCEEEEEEEGGGTEEEEEEGG
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc--ccccccCCceeEEEEcCCCEEEEEECC
Confidence 45688999999888888866544 99999988876654321 000113345678999999999999875
No 121
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.37 E-value=0.031 Score=45.87 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=46.8
Q ss_pred cCCCCccceEECC-CCcEEEEECC---------------------CC-EEEEECCCC-------cEEEEecccc------
Q psy4774 9 QQCGRPLGMKFDK-NGALHVADAY---------------------FG-LYKVNVTTG-------QTEQLISMDT------ 52 (120)
Q Consensus 9 ~~~g~P~Gl~~d~-~G~l~V~d~~---------------------~g-i~~vd~~~g-------~~~~~~~~~~------ 52 (120)
....||.|+.+++ +|.+|++-.. .| |+++.++.+ +++.++....
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 3457899999997 6899998431 13 999976533 2333332110
Q ss_pred --------ccCCCCCcCCCceEEcCCCCEEEE-eCC
Q psy4774 53 --------EIDGAKPQIPNSVTVDSDGMVYWS-DSS 79 (120)
Q Consensus 53 --------~~~g~~~~~pndl~v~~~G~iy~T-Ds~ 79 (120)
..+...|..|+.|+|+++|+|||. |..
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~ 496 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGD 496 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCC
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCC
Confidence 011235889999999999999975 543
No 122
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.33 E-value=0.0099 Score=48.77 Aligned_cols=62 Identities=19% Similarity=0.348 Sum_probs=45.7
Q ss_pred cCCCCccceEECCCCcEEEE-ECC------------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EE
Q psy4774 9 QQCGRPLGMKFDKNGALHVA-DAY------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VY 74 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V~-d~~------------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy 74 (120)
.....|-+|+|++.|+|||| |.. +.++.+++++|++..|+. ...+.+ .-+++|++||. ||
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~---~P~gaE---~TG~~fspDg~tlf 546 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV---GPIGCE---VTGISFSPDQKTLF 546 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE---CCTTCE---EEEEEECTTSSEEE
T ss_pred CCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe---CCCCcc---CcCeeECCCCCEEE
Confidence 34567999999999999999 432 237888998999998875 223333 35899999985 55
Q ss_pred EE
Q psy4774 75 WS 76 (120)
Q Consensus 75 ~T 76 (120)
|.
T Consensus 547 vn 548 (592)
T 3zwu_A 547 VG 548 (592)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 123
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.30 E-value=0.02 Score=45.44 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=50.1
Q ss_pred CCccceEECC-------CCcEEEEECCCCEEEEECCCCc----EEEEe-ccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK-------NGALHVADAYFGLYKVNVTTGQ----TEQLI-SMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-------~G~l~V~d~~~gi~~vd~~~g~----~~~~~-~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.-|.|++|-. +|.+++++....|+++..+.+. .+.+. .............|-+|++++||.|||+|..
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSS 355 (463)
T ss_dssp -CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEES
T ss_pred ccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEecc
Confidence 4578888843 4678999987558888754321 22221 1000001112335789999999999999975
Q ss_pred CCcccccceecceecCCceEEEEc-CC
Q psy4774 80 TKYKLYDGLFDGLTSGSGSFIKIG-PN 105 (120)
Q Consensus 80 ~~~~~~~~~~~~~~~~~G~l~~~d-~~ 105 (120)
... .....|+|||+. |.
T Consensus 356 ~~~---------~~~~~G~I~Ri~~p~ 373 (463)
T 2wg3_C 356 KSM---------TQTHNGKLYKIVDPK 373 (463)
T ss_dssp SCG---------GGCSSEEEEEEECTT
T ss_pred CCc---------ccCCCCcEEEecCcc
Confidence 211 123578999986 44
No 124
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.21 E-value=0.025 Score=41.55 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=43.6
Q ss_pred CCccceEECCCC-cEEEE-ECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNG-ALHVA-DAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G-~l~V~-d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..+.||++++++ .||++ |....|+++|++ |++..-.. ..| +.-+.+|++.++|.+|+++-.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~----l~g--~~D~EGIa~~~~g~~~vs~E~ 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP----LDF--VKDLETIEYIGDNQFVISDER 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE----CSS--CSSEEEEEECSTTEEEEEETT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe----cCC--CCChHHeEEeCCCEEEEEECC
Confidence 568899999874 79986 444459999996 76543331 122 345679999999998898754
No 125
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.19 E-value=0.023 Score=45.42 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=45.1
Q ss_pred CCCccceEECCCC-cEEEEECCCC-EEEEECC-CCcEEEEeccccccCC----------CC-CcCCCceEEcCCC-CEEE
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAYFG-LYKVNVT-TGQTEQLISMDTEIDG----------AK-PQIPNSVTVDSDG-MVYW 75 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~~g-i~~vd~~-~g~~~~~~~~~~~~~g----------~~-~~~pndl~v~~~G-~iy~ 75 (120)
.+.|.+|++.+|| .|||++...+ |..+|.. .++.+.+... ...| .+ -..|.++++++|| .||+
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I--~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV--KLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE--ECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE--EeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 3679999999999 6899987755 6666642 2333333221 1221 11 1369999999998 6999
Q ss_pred EeCC
Q psy4774 76 SDSS 79 (120)
Q Consensus 76 TDs~ 79 (120)
|++-
T Consensus 398 aNsl 401 (462)
T 2ece_A 398 TNSL 401 (462)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9974
No 126
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.18 E-value=0.011 Score=45.39 Aligned_cols=59 Identities=24% Similarity=0.241 Sum_probs=42.6
Q ss_pred CCccc---eEECCCC-cEEEEEC---C------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 12 GRPLG---MKFDKNG-ALHVADA---Y------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 12 g~P~G---l~~d~~G-~l~V~d~---~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
-+|.| ++++++| ++||+.. . .++..||.+++++..-.. . |. .|++|++++||. +|++.
T Consensus 261 ~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~----v-g~---~p~gi~~s~Dg~~l~va~ 332 (368)
T 1mda_H 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS----N-GH---DSDAIIAAQDGASDNYAN 332 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE----E-EE---EECEEEECCSSSCEEEEE
T ss_pred cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE----C-CC---CcceEEECCCCCEEEEEc
Confidence 46777 8899986 7899754 2 468899998876432221 1 11 489999999995 99988
Q ss_pred C
Q psy4774 78 S 78 (120)
Q Consensus 78 s 78 (120)
.
T Consensus 333 ~ 333 (368)
T 1mda_H 333 S 333 (368)
T ss_dssp E
T ss_pred c
Confidence 7
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.18 E-value=0.07 Score=36.79 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=41.3
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCC-CcEEEEeccccccCCCCCcCCCceEEcCCCCEEEE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTT-GQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 76 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~-g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~T 76 (120)
+....+++.++|+.+++.....|+.+|.++ ++...+.. +.....++.++++++|...++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~spdg~~l~~ 101 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDT------GFATICNNDHGISPDGALYAI 101 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCC------TTCCCBCSCCEECTTSSEEEE
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecc------ccccccccceEECCCCCEEEE
Confidence 456789999999877765545699999887 77655532 222235678999999864443
No 128
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.13 E-value=0.017 Score=44.64 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=47.0
Q ss_pred cCCCCccceEECCC-CcEEEEECCCCEEEEE--CCCCc-EEEEeccccccCCCCCc-CCCceEEc--CC--CCEEEEeCC
Q psy4774 9 QQCGRPLGMKFDKN-GALHVADAYFGLYKVN--VTTGQ-TEQLISMDTEIDGAKPQ-IPNSVTVD--SD--GMVYWSDSS 79 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~-G~l~V~d~~~gi~~vd--~~~g~-~~~~~~~~~~~~g~~~~-~pndl~v~--~~--G~iy~TDs~ 79 (120)
...+.|.|+++|+. |.|||++...||++++ |+++. .+.+. ...+..+. -+.+|++. ++ |.|++|+..
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~----~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVID----RADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEE----EBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEE----EecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 34678999999975 7999999989999999 54322 23333 22334444 67899995 44 458888865
Q ss_pred C
Q psy4774 80 T 80 (120)
Q Consensus 80 ~ 80 (120)
.
T Consensus 253 ~ 253 (355)
T 3amr_A 253 N 253 (355)
T ss_dssp G
T ss_pred C
Confidence 4
No 129
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.10 E-value=0.01 Score=44.63 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=38.0
Q ss_pred ccceEECCCC-cEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC
Q psy4774 14 PLGMKFDKNG-ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM 72 (120)
Q Consensus 14 P~Gl~~d~~G-~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~ 72 (120)
|.+|+++++| .||++.. ..|..+|.++++++++... ...| ..|+.++++|+|+
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i--~~~G---~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI--EGAA---EASLQVQFHPVGG 360 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE--TTSC---SSEEEEEECCCSC
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe--ccCC---CCcEEEEecCCCC
Confidence 9999999999 5676665 5699999988844444321 1123 3589999999985
No 130
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.03 E-value=0.02 Score=42.54 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=42.0
Q ss_pred CCCccceEECCCC-cEEEEECCCC---EEEEECCCCcEEE----EeccccccCCCC-----CcCCCceE-EcCCCC-EEE
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAYFG---LYKVNVTTGQTEQ----LISMDTEIDGAK-----PQIPNSVT-VDSDGM-VYW 75 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~~g---i~~vd~~~g~~~~----~~~~~~~~~g~~-----~~~pndl~-v~~~G~-iy~ 75 (120)
...|.+++++++| .||+++...+ ++.++.++|+... +........+.. ...|.+++ +++||. ||+
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 4569999999999 5788876433 4455665677542 221100000100 11578999 999995 888
Q ss_pred EeCC
Q psy4774 76 SDSS 79 (120)
Q Consensus 76 TDs~ 79 (120)
++..
T Consensus 272 ~~~~ 275 (365)
T 1jof_A 272 SSRA 275 (365)
T ss_dssp EEEE
T ss_pred ECCC
Confidence 8753
No 131
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.97 E-value=0.065 Score=39.88 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=43.5
Q ss_pred CCccceEECCCC-cEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDKNG-ALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G-~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
+.|.+++++++| .||++....+ |..+|.++++...... . ...++.++++++|. ||++...
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----~---~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-----V---FDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-----C---SSSEEEEEECTTSSEEEEEECC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-----C---CCCCCeEEEcCCCCEEEEEecC
Confidence 468899999999 5788866644 8888988776544332 1 12467999999986 7777764
No 132
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.83 E-value=0.011 Score=48.37 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=41.3
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
..+..+..|++|+||++-. .||.++++++++.+.+. .++-+-+.+..+..+ +|+|||+-...
T Consensus 517 ~~~~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~-----~~gl~~~~i~~i~~~-~g~lWi~t~~G 578 (758)
T 3ott_A 517 KSPNYLLCDEDGLLWVGFH-GGVMRINPKDESQQSIS-----FGSFSNNEILSMTCV-KNSIWVSTTNG 578 (758)
T ss_dssp GCEEEEEECTTSCEEEEET-TEEEEECC--CCCCBCC-----CCC---CCEEEEEEE-TTEEEEEESSC
T ss_pred cccceEEECCCCCEEEEec-CceEEEecCCCceEEec-----ccCCCccceEEEEEC-CCCEEEECCCC
Confidence 3467899999999999864 68999999876654431 134343445667665 79999987653
No 133
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.81 E-value=0.023 Score=44.62 Aligned_cols=64 Identities=11% Similarity=0.037 Sum_probs=42.8
Q ss_pred CCCccceEECCCC-cEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCc----eEEcCCCCEEEEeC
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNS----VTVDSDGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pnd----l~v~~~G~iy~TDs 78 (120)
+..|.++++++|| .|||++.. ..|..||.+++++.--. ...+.....|.+ +++.++|.+.+.|.
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I----~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML----DVPDCYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE----ECCSEEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE----EcCCceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 4679999999999 78999753 45999999887753222 122222233444 77778887665555
No 134
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.38 E-value=0.042 Score=42.70 Aligned_cols=65 Identities=11% Similarity=0.087 Sum_probs=43.8
Q ss_pred CCCccceEECCCC-cEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCc----eEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNG-ALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNS----VTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G-~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pnd----l~v~~~G~iy~TDs~ 79 (120)
+..|.++++++|| .|||++.. ..|..||.+++++..-. ...|....+|.+ +++.+||.+.+.+..
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI----~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML----DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE----ECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE----ECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 4579999999999 68999753 45999999888753222 122322233444 478888877666664
No 135
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.24 E-value=0.24 Score=39.31 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=43.3
Q ss_pred CCccceEECCCCcEEEEECCC---CEEEEECCCCcEEEEeccccccCCCCCcC--CCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYF---GLYKVNVTTGQTEQLISMDTEIDGAKPQI--PNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~---gi~~vd~~~g~~~~~~~~~~~~~g~~~~~--pndl~v~~~G~iy~TDs~ 79 (120)
..+..+++.++|+||++.... .|++++.++++.+.+....... ..+.-. ...+++.++|.++++-+.
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~-~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF-AGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBS-SCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccc-cCccccccCceEeEeCCCEEEEEEEc
Confidence 456678999999987764433 4999998788877665311011 111111 357889899988887653
No 136
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.23 E-value=0.018 Score=42.19 Aligned_cols=61 Identities=21% Similarity=0.190 Sum_probs=38.1
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCC-CcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTT-GQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~-g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
..+.||++|.||++.. ..|+|+++.+ +.- .++.....+...-.+...-|.++|+|+||...
T Consensus 91 ~a~~fD~~G~LYav~d-G~iyr~~pP~~~~~-~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 91 QFLFFDPNGYLYAVSK-DKLYKASPPQSDTD-NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp SEEEECTTSCEEEEET-TEEEEESCCCSTTC-CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eEEEECCCCCEEEeCC-CEEEEeCCCcCCCC-ceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 4689999999999933 3499998743 221 22211111111122334789999999999766
No 137
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.99 E-value=0.047 Score=43.57 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=45.1
Q ss_pred CCccceEECCCCcEEEEECC-------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAY-------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~-------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.+|.+++..++| |||+..+ .+|+.+|.+++++.--. +.++.+-.++.|+++.+++++.+|-.
T Consensus 138 s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~----~~~~~~~~~~Yd~~~~p~~~~mvsS~ 206 (462)
T 2ece_A 138 SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKW----EIDRGDQYLAYDFWWNLPNEVLVSSE 206 (462)
T ss_dssp EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEEC----CSBCTTCCCCCCEEEETTTTEEEECB
T ss_pred CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE----ccCCCCccccceEEECCCCCEEEEcc
Confidence 379999999999 9997543 25999999888754333 22344556678999999987666553
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.70 E-value=0.28 Score=39.00 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=41.3
Q ss_pred CCCccceEECCCCc-EEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCC-CceE-EcCC-CCEEEEeC
Q psy4774 11 CGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIP-NSVT-VDSD-GMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~p-ndl~-v~~~-G~iy~TDs 78 (120)
...|.+++|+++|+ +|++... +.|..+|.++|++..... ....| .| .+.. ++++ |.+|+|..
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~----~g~~p--h~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD----VGKTP--HPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE----CSSSB--CCTTCEEEEETTTEEEEEEEB
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec----cCCCC--CCCCCcccCCCCCccEEEecc
Confidence 46799999999997 6777664 558889999898655442 11111 11 1333 4666 78999875
No 139
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.62 E-value=0.16 Score=41.01 Aligned_cols=62 Identities=10% Similarity=-0.021 Sum_probs=43.3
Q ss_pred CCCCccceEECCCC-cEEEEECCCCEEEEECC--CCcEEEEeccccccCCCCCcCCCceEEc----CCC-CEEEEeCC
Q psy4774 10 QCGRPLGMKFDKNG-ALHVADAYFGLYKVNVT--TGQTEQLISMDTEIDGAKPQIPNSVTVD----SDG-MVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G-~l~V~d~~~gi~~vd~~--~g~~~~~~~~~~~~~g~~~~~pndl~v~----~~G-~iy~TDs~ 79 (120)
.+..|.++++.++| .+||++....|..+|.. ++++ +... . .| ..|.+++++ +|| .+|+++..
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~--v~~i--~-~G---~~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT--VAEI--K-IG---SEARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE--EEEE--E-CC---SEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE--eEEE--e-cC---CCCceeEEccccCCCCCEEEEEEcc
Confidence 34578899999999 57888754569999984 5543 2221 1 12 247899999 588 68888764
No 140
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.47 E-value=0.96 Score=33.41 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=44.7
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.|+|+.+++-...+ |...|..+++.....................++++++|.+.++-+.
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 4567899999999888766655 6667887776544332110111123345678999999988877664
No 141
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.13 E-value=0.27 Score=36.52 Aligned_cols=60 Identities=18% Similarity=0.145 Sum_probs=41.8
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-..++|.|+|+++++-...+ |...|.++++...-.. +.+. ...+.|+|+|||...+|-|.
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~---~gH~---~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK---QAHS---FAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET---TSSS---SCEEEEEECTTSCEEEEEET
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec---Cccc---CCEEEEEECCCCCEEEEEeC
Confidence 35789999999888755544 7777887776432111 1122 23579999999999999875
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.06 E-value=0.53 Score=37.54 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=38.7
Q ss_pred ccceEECCCCc-EEEEECCC-----CEEEEECCCC-cEEEEeccccccCCCCCcCCCceEEcC--CCCEEEEeC
Q psy4774 14 PLGMKFDKNGA-LHVADAYF-----GLYKVNVTTG-QTEQLISMDTEIDGAKPQIPNSVTVDS--DGMVYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~-l~V~d~~~-----gi~~vd~~~g-~~~~~~~~~~~~~g~~~~~pndl~v~~--~G~iy~TDs 78 (120)
+..+++.++|+ |+++.... .|+.+|.++| +...+.. ..........+.+++++ +|.++++-+
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~---~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV---ETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE---EECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE---ccCCCeECccCCceeecCCCCEEEEEEc
Confidence 45799999997 55543222 4888999888 6665543 11221222347889999 887555443
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.97 E-value=0.24 Score=39.43 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=41.4
Q ss_pred CccceEECCCC-cEEEEECCCCEEEEEC--CCCcEEEEeccccccCCCCCcCCCceEEcC----CCC-EEEEeC
Q psy4774 13 RPLGMKFDKNG-ALHVADAYFGLYKVNV--TTGQTEQLISMDTEIDGAKPQIPNSVTVDS----DGM-VYWSDS 78 (120)
Q Consensus 13 ~P~Gl~~d~~G-~l~V~d~~~gi~~vd~--~~g~~~~~~~~~~~~~g~~~~~pndl~v~~----~G~-iy~TDs 78 (120)
.|.+++++++| .||+++....|..+|. +++++..-+ . .| ..|..+++++ +|. +|+++.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i----~-~g---~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI----K-IG---IEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE----E-CC---SEEEEEEECCSTTCTTTEEEEEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE----e-cC---CCcceEEeCCCcCCCCCEEEEEEc
Confidence 47899999999 5688876655888998 666543222 1 12 2478999999 984 788764
No 144
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.60 E-value=0.81 Score=34.61 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=39.3
Q ss_pred CCccceEECCCCcEEE-EECC---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 12 GRPLGMKFDKNGALHV-ADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V-~d~~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
+....+++.|+|+.++ +... ..|+.+|.++|+...+.. ..+ ..+.++++|||. |+|+-+
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~----~~~----~~~~~~~spdg~~la~~~~ 242 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS----FPR----HNGAPAFSPDGSKLAFALS 242 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC----CSS----CEEEEEECTTSSEEEEEEC
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec----CCC----cccCEEEcCCCCEEEEEEe
Confidence 3456799999996544 3332 248889998888776643 111 346788888886 666654
No 145
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.52 E-value=0.15 Score=37.93 Aligned_cols=53 Identities=13% Similarity=0.141 Sum_probs=34.3
Q ss_pred eEECCCC-cEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCCC
Q psy4774 17 MKFDKNG-ALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSST 80 (120)
Q Consensus 17 l~~d~~G-~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~~ 80 (120)
++++++| .||.++.. ..|++++.+++..+++.. + +.. ..+.|+ +.||+||...
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~------~-~~~----~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD------C-NCY----KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC------S-CEE----EEEEEETTEEEEEEGGG
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC------C-Ccc----ceeeecCCEEEEEEcCC
Confidence 4556665 78888764 459999987776666642 2 111 235564 6899998753
No 146
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.96 E-value=1.2 Score=33.69 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=37.9
Q ss_pred CCccceEECCCCcEEE-EECC---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 12 GRPLGMKFDKNGALHV-ADAY---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V-~d~~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
+....+++.|+|+.++ +... ..|+.+|.++++...+.. .. .....++++|+|. |+++-
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-----~~---~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-----GR---SNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC-----CS---SCEEEEEECTTSSEEEEEE
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC-----CC---CcccceEECCCCCEEEEEE
Confidence 3456899999997444 4332 239999998888765532 11 2345788888886 55554
No 147
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.79 E-value=0.076 Score=43.64 Aligned_cols=65 Identities=20% Similarity=0.122 Sum_probs=44.6
Q ss_pred cCCCCccceEECCCCc-EEEEECC-CCEEEEECCCCcE----------EEEeccccccCCCCCcCCCceEEcCCCCEEEE
Q psy4774 9 QQCGRPLGMKFDKNGA-LHVADAY-FGLYKVNVTTGQT----------EQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 76 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~-l~V~d~~-~gi~~vd~~~g~~----------~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~T 76 (120)
+.+..|.|+.+.|||+ +||++.. ..|..+|.++.+. .+++.. .-| ..|..++|+++|++|+|
T Consensus 274 pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---~vG---~gP~h~aF~~dG~aY~t 347 (595)
T 1fwx_A 274 PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---ELG---LGPLHTAFDGRGNAYTS 347 (595)
T ss_dssp EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC---BCC---SCEEEEEECTTSEEEEE
T ss_pred ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc---CCC---CCcceEEECCCCeEEEE
Confidence 3456899999999995 6777765 4588888753310 122211 112 34789999999999998
Q ss_pred eCC
Q psy4774 77 DSS 79 (120)
Q Consensus 77 Ds~ 79 (120)
...
T Consensus 348 ~~l 350 (595)
T 1fwx_A 348 LFL 350 (595)
T ss_dssp ETT
T ss_pred Eec
Confidence 764
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.75 E-value=0.25 Score=38.68 Aligned_cols=53 Identities=21% Similarity=0.198 Sum_probs=36.7
Q ss_pred cceEECCCCcEEEE---ECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEE
Q psy4774 15 LGMKFDKNGALHVA---DAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYW 75 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~---d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~ 75 (120)
..++++|||+.+++ +.. ..|+.+|.++|+...+.. ..+ ..+.++++|||...+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~----~~~----~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS----GEG----SFSSASISPGMKVTA 210 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC----SSC----EEEEEEECTTSCEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec----CCC----ccccceECCCCCEEE
Confidence 67889999987663 211 238999988888776642 111 237899999997544
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.51 E-value=1.2 Score=30.36 Aligned_cols=57 Identities=14% Similarity=0.292 Sum_probs=36.6
Q ss_pred ccceEECCCCcEEE-EECCC---CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 14 PLGMKFDKNGALHV-ADAYF---GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~l~V-~d~~~---gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
...+++.++|+.++ +.... .|+.++.++++...+.. . ...++.++++++|. |+++-.
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~---~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH-----G---EGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC-----S---SSCEEEEEECTTSSEEEEEEC
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc-----C---CCccccceECCCCCEEEEEec
Confidence 56789999996443 33222 48888887777655532 1 12357899999986 565543
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.38 E-value=0.59 Score=37.27 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=38.6
Q ss_pred CCccceEECCCCcEEE-EEC--------------------------------C-CCEEEEECCCCcEEEEeccccccCCC
Q psy4774 12 GRPLGMKFDKNGALHV-ADA--------------------------------Y-FGLYKVNVTTGQTEQLISMDTEIDGA 57 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V-~d~--------------------------------~-~gi~~vd~~~g~~~~~~~~~~~~~g~ 57 (120)
+++.++++.|||+.++ +.. . ..|+.+|.++++...+.. ...
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-----~~~ 255 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-----GEP 255 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-----CSC
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-----CCC
Confidence 4578999999996544 330 1 238888887777554431 111
Q ss_pred CCcCCCceEEcCCCC-EEEEe
Q psy4774 58 KPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 58 ~~~~pndl~v~~~G~-iy~TD 77 (120)
.-..+..+++++||. |+++.
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEE
T ss_pred CceeEeeEEEECCCCEEEEEE
Confidence 123456899999996 66643
No 151
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.32 E-value=2.3 Score=31.34 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=43.1
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...++|.++|+++++-...| |...|..+++...-.. .....--...+.++++++|...+|-+.
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~---~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG---TLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC---CSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe---cccCCCCCceEEEEECCCCCEEEEeeC
Confidence 46899999999988876655 7777876666433221 111112235689999999999888775
No 152
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.29 E-value=0.62 Score=37.55 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=39.7
Q ss_pred CCccceE--ECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMK--FDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~--~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
.+|.+.. .|+.+.+||+....+ |..||.+++++..-.. .|. .|+++++++||+ +|++...
T Consensus 154 ~~P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~-----~g~---~p~~v~~SpDGr~lyv~~~d 217 (567)
T 1qks_A 154 DRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLD-----TGY---AVHISRLSASGRYLFVIGRD 217 (567)
T ss_dssp GSCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEE-----CSS---CEEEEEECTTSCEEEEEETT
T ss_pred ccccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEe-----CCC---CccceEECCCCCEEEEEcCC
Confidence 3454443 445567899987644 9999998887543322 121 467999999985 7887643
No 153
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.12 E-value=0.83 Score=36.57 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=39.5
Q ss_pred ccceEECCCCcEEE-EEC--C---CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHV-ADA--Y---FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V-~d~--~---~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...+++ ++|+.++ +.. . ..|+.+|.++|+...+... ....-+...+.+++++||.++++-+.
T Consensus 289 ~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~~~~~~~~spdg~~~~~~~~ 356 (741)
T 2ecf_A 289 LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE---TSPTWVPLHNSLRFLDDGSILWSSER 356 (741)
T ss_dssp EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE---ECSSCCCCCSCCEECTTSCEEEEECT
T ss_pred EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc---CCCCcCCcCCceEECCCCeEEEEecC
Confidence 457889 9996544 322 2 2388899988887776531 11111223468899999987777554
No 154
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.06 E-value=1.1 Score=32.33 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=45.6
Q ss_pred eEECC-CCcEEEEEC-----------------CCCEEEEECCCCcEEEEecccccc---CCCCCcCCCceEEcCCCC-EE
Q psy4774 17 MKFDK-NGALHVADA-----------------YFGLYKVNVTTGQTEQLISMDTEI---DGAKPQIPNSVTVDSDGM-VY 74 (120)
Q Consensus 17 l~~d~-~G~l~V~d~-----------------~~gi~~vd~~~g~~~~~~~~~~~~---~g~~~~~pndl~v~~~G~-iy 74 (120)
+++.+ +|+++++.. ...|+.+|.++++...+....... ..........++++++|. |+
T Consensus 287 ~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEE
Confidence 77888 998777532 134999998888766664310000 000111245688999984 66
Q ss_pred EEeCCCCcccccceecceecCCceEEEEcCCC
Q psy4774 75 WSDSSTKYKLYDGLFDGLTSGSGSFIKIGPNT 106 (120)
Q Consensus 75 ~TDs~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 106 (120)
|+.... ....||.++..+
T Consensus 367 ~~s~~~--------------~~~~l~~~~~~~ 384 (396)
T 3c5m_A 367 FTSDFE--------------GVPAIYIADVPE 384 (396)
T ss_dssp EEECTT--------------SSCEEEEEECCT
T ss_pred EEecCC--------------CCceEEEEEEcc
Confidence 665431 134789988766
No 155
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=92.05 E-value=0.9 Score=35.92 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=38.8
Q ss_pred CCccceEECCCCcEE-EEE-CC-------CCEEEEECC-CC---cEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALH-VAD-AY-------FGLYKVNVT-TG---QTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~-V~d-~~-------~gi~~vd~~-~g---~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.....+++.+||+.+ ++. .. ..|+.++.+ +| +...+.. . . -..+..+++++||.+||+-.
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~---~-~---~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG---G-P---EEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE---E-T---TBCEEEEEECTTSCEEEEEC
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC---C-C---CceEcceEECCCCeEEEEEC
Confidence 345678999999643 333 22 248888887 57 5555542 1 1 12346789999999888765
Q ss_pred C
Q psy4774 79 S 79 (120)
Q Consensus 79 ~ 79 (120)
.
T Consensus 261 ~ 261 (662)
T 3azo_A 261 R 261 (662)
T ss_dssp T
T ss_pred C
Confidence 4
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.75 E-value=1.3 Score=32.16 Aligned_cols=55 Identities=20% Similarity=0.343 Sum_probs=34.8
Q ss_pred eEECCCCc-EEEEECCCC---EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 17 MKFDKNGA-LHVADAYFG---LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 17 l~~d~~G~-l~V~d~~~g---i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
.++.|||+ |+.+....+ |+.+|.++|+...+.. ..+.. ...++++|||. |+|+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~----~~~~~---~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE----GRGDN---TFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC----SSCBC---SSSCEECTTSSEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee----CCCCC---ccceEEcCCCCEEEEEeC
Confidence 67899996 444433233 9999998888776642 11111 22567888884 666654
No 157
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=91.60 E-value=2.8 Score=30.25 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=41.2
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.++|+++++-...+ |...|.++++...... ... ...+.++++++|.+.+|-+.
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~----~h~---~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE----GHA---MPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----CCS---SCCCEEEECTTSCEEEEECT
T ss_pred ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc----ccC---CceeEEEEcCCCCEEEEEcC
Confidence 3456899999998887755555 6667887776433221 111 23578999999988877664
No 158
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.56 E-value=0.33 Score=36.03 Aligned_cols=51 Identities=10% Similarity=0.202 Sum_probs=31.5
Q ss_pred ceEECCCC-cEEEEE---CC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC-CCEEEEeC
Q psy4774 16 GMKFDKNG-ALHVAD---AY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDS 78 (120)
Q Consensus 16 Gl~~d~~G-~l~V~d---~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs 78 (120)
+.++.++| .||.++ .. ..|++++.++.+.+.+... .. .+++++ +.||||+.
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~-----~~-------~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH-----YL-------FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS-----CC-------CCSEEETTEEEEECT
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC-----Cc-------eEeeEECCEEEEEeC
Confidence 44555554 888888 22 3499999976667777531 11 123443 47888887
No 159
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.49 E-value=1.5 Score=32.15 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=12.5
Q ss_pred CCcEEEEECCCCEEEEECCCCcE
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
++.+|++....+|+.+|+++|+.
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCE
T ss_pred CCEEEEEecCcEEEEEECCCCcE
Confidence 45566554444466666655553
No 160
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=91.18 E-value=1.9 Score=33.15 Aligned_cols=62 Identities=11% Similarity=0.287 Sum_probs=37.0
Q ss_pred CCccceEE--CCC-Cc--EEEEECCCCEEE--E-ECCCCcE--EEEeccccccCCCCCcCCCceEEcCC-CCEEEEeCC
Q psy4774 12 GRPLGMKF--DKN-GA--LHVADAYFGLYK--V-NVTTGQT--EQLISMDTEIDGAKPQIPNSVTVDSD-GMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~--d~~-G~--l~V~d~~~gi~~--v-d~~~g~~--~~~~~~~~~~~g~~~~~pndl~v~~~-G~iy~TDs~ 79 (120)
..|+||++ ++. |. +||.+....+.+ + +..+|++ +.+... +..+ .|-++++|+. |.||+++-.
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f--~lgs----q~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF--KMNS----QTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE--ECSS----CEEEEEEETTTTEEEEEETT
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe--cCCC----CcceEEEcCCCCeEEEeccc
Confidence 67999999 775 55 455554323444 3 2234433 222221 1222 4679999974 899999985
No 161
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.14 E-value=1.9 Score=30.19 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=40.7
Q ss_pred CCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++|+++++... ..|..++.++++...+.. .. ..+..++++++|.+.++-+.
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-----~~---~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL-----HE---SCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC-----CS---SCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC-----Cc---cceeEEEECCCCCEEEEecC
Confidence 45678999999977766444 447788887776544421 11 23578999999887776654
No 162
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.94 E-value=1.6 Score=34.91 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=41.3
Q ss_pred CCCccceEECCCCcEEE-EEC-CC-----CEEEEECCCCcEEEEecccccc-CC-------CCC---------cCCCceE
Q psy4774 11 CGRPLGMKFDKNGALHV-ADA-YF-----GLYKVNVTTGQTEQLISMDTEI-DG-------AKP---------QIPNSVT 66 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V-~d~-~~-----gi~~vd~~~g~~~~~~~~~~~~-~g-------~~~---------~~pndl~ 66 (120)
...+..+++.+||+.++ +.. .. .|+.+|.++|+...+....... ++ ... .....++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 34578999999997544 443 22 4888999888877776421000 00 000 1257889
Q ss_pred EcCCCC-EEEEeC
Q psy4774 67 VDSDGM-VYWSDS 78 (120)
Q Consensus 67 v~~~G~-iy~TDs 78 (120)
++|||. |+++..
T Consensus 116 ~SpDg~~l~~~~~ 128 (741)
T 2ecf_A 116 WSPDAQRLLFPLG 128 (741)
T ss_dssp ECTTSSEEEEEET
T ss_pred ECCCCCEEEEEeC
Confidence 999986 555443
No 163
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.40 E-value=1.1 Score=32.85 Aligned_cols=11 Identities=9% Similarity=0.232 Sum_probs=6.0
Q ss_pred CceEEEEcCCC
Q psy4774 96 SGSFIKIGPNT 106 (120)
Q Consensus 96 ~G~l~~~d~~~ 106 (120)
.|+||.-+.++
T Consensus 318 ~~~l~v~~~~g 328 (376)
T 3q7m_A 318 NGNLVVGDSEG 328 (376)
T ss_dssp TTEEEEECTTS
T ss_pred CCEEEEEeCCC
Confidence 35566655544
No 164
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.22 E-value=3.5 Score=29.72 Aligned_cols=63 Identities=13% Similarity=-0.001 Sum_probs=40.5
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.|+|+++++-...+ |...|..+++...... ..........++++++|.+.++-+.
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-----HDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----CTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-----cCCcccceEEEEECCCCCEEEEECC
Confidence 4467899999998887765555 6667876665322221 1112223567899999988877654
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.18 E-value=2.4 Score=30.57 Aligned_cols=58 Identities=19% Similarity=0.195 Sum_probs=35.1
Q ss_pred ccceEECCCCcEEE--EEC-C-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 14 PLGMKFDKNGALHV--ADA-Y-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~l~V--~d~-~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
+..+++.|+|+.++ ++. + ..|+.++.++++...+.. ... .....+.+++||. |+|+..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~----~~~---~~~~~~~~spdg~~l~~~~~ 100 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE----GKG---DNTFGGFISTDERAFFYVKN 100 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC----SSC---BCTTTCEECTTSSEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec----CCC---CccccceECCCCCEEEEEEc
Confidence 56788999996533 332 1 248889988887665532 111 1123467888885 555544
No 166
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=90.18 E-value=2.6 Score=29.10 Aligned_cols=60 Identities=18% Similarity=0.101 Sum_probs=38.9
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
+....+++.++|.|+++.....|...|.++++...... .+. .....++++++|.+..+..
T Consensus 226 ~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~~~---~~i~~~~~~~~~~~~~~~~ 285 (313)
T 3odt_A 226 SFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVIT----LPA---ISIWSVDCMSNGDIIVGSS 285 (313)
T ss_dssp SCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEE----CSS---SCEEEEEECTTSCEEEEET
T ss_pred ceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEe----ccC---ceEEEEEEccCCCEEEEeC
Confidence 45678999999976666554447777877776544332 111 2356899999998554433
No 167
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.11 E-value=3.3 Score=29.17 Aligned_cols=61 Identities=15% Similarity=0.007 Sum_probs=39.7
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...| |...|..+++...... .+. .....++++++|+..++-+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----~h~---~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD----GHT---GTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh----hcC---CcEEEEEEcCCCCEEEEEeC
Confidence 4456899999998777654444 7777877776543331 111 23568888888877766554
No 168
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.08 E-value=3.9 Score=29.43 Aligned_cols=62 Identities=11% Similarity=-0.062 Sum_probs=40.6
Q ss_pred CCccceEECC--CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK--NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~--~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.+ +|+++++-...+ |...|.++++...+.. ...-...+.++++++|.+.++-+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~------~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS------AKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC------CCSSCCCCEEEECTTSCEEEEECT
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe------cCCCCceEEEEECCCCCEEEEEcC
Confidence 3467899999 898888654444 7777887777644331 111123678999999988887443
No 169
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.06 E-value=2.2 Score=29.81 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=36.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.....+++.++|+++++-...+ |..++.++++....... .... .....++++++|...++-+
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~---~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL--TSSA---PACYALAISPDSKVCFSCC 160 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE--ECSS---SCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec--ccCC---CceEEEEECCCCCEEEEEe
Confidence 4567899999998766644444 77778776653333211 1111 2346788888876655544
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.92 E-value=0.91 Score=33.00 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=38.0
Q ss_pred ccceEECCCCcEEEEE---------C-CCCEEEEECCCCcEEEEecccccc---CCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 14 PLGMKFDKNGALHVAD---------A-YFGLYKVNVTTGQTEQLISMDTEI---DGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d---------~-~~gi~~vd~~~g~~~~~~~~~~~~---~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
|.|+++.++|+.+++. . ...|+.+|.++++...+....... .+.+......+++++||. |+|+-.
T Consensus 292 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 292 YDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp TTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 6677888888543321 1 234999999888887775310000 001111357889999994 666644
No 171
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.33 E-value=4.4 Score=29.58 Aligned_cols=63 Identities=10% Similarity=0.036 Sum_probs=42.2
Q ss_pred CCccceEECCCCcEEEEECCCC--EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG--LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g--i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++|+++++-...+ |...|.++++...... .|.--...+.++++++|...+|-+.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~-----~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR-----RGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE-----CTTCCSCEEEEEECTTSCEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE-----cCCCCCcEEEEEECCCCCEEEEEEC
Confidence 4456899999998888755555 5556887776433221 1111134579999999998887765
No 172
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.32 E-value=0.36 Score=39.68 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=46.8
Q ss_pred cCCCCccceEECCCCcEEEEECC-CCEEEEECCCCc--------EEEEeccccccCCCC--CcCCCceEEcCCC-CEEEE
Q psy4774 9 QQCGRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQ--------TEQLISMDTEIDGAK--PQIPNSVTVDSDG-MVYWS 76 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~--------~~~~~~~~~~~~g~~--~~~pndl~v~~~G-~iy~T 76 (120)
+.+.+|.+++|+++|++|++..- ..|.+++.+++. ..++... ..+-+| .+...++++++|| .||.+
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ki--dV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKL--DVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEE--ECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEe--ecccccccceeccceEeCCCCCEEEEc
Confidence 55678999999999999998765 448888765411 2233221 122122 5566789999999 58887
Q ss_pred eCCC
Q psy4774 77 DSST 80 (120)
Q Consensus 77 Ds~~ 80 (120)
+-.+
T Consensus 406 Nk~s 409 (595)
T 1fwx_A 406 SKFS 409 (595)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 7754
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=89.08 E-value=2.2 Score=34.62 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=38.2
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCc-CCCceEEcCCCC
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQ-IPNSVTVDSDGM 72 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~-~pndl~v~~~G~ 72 (120)
-..+++.++|.+++++ ...|...+.++|+..++... .....+. ..++++++|||.
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Spdg~ 74 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLEN---STFDEFGHSINDYSISPDGQ 74 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECT---TTTTTCCSCCCEEEECTTSS
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEec---hhhhhhcccccceEECCCCC
Confidence 4578999999887776 44589999999988777642 1111221 235789999996
No 174
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.66 E-value=6.1 Score=29.50 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=38.8
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-.+|+|.| +++++++-...+ |...|.+++....+... +. .-.....++++++|.+.++-+.
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS----DT-INIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC----SS-CSCCCCCEEEETTTTEEEEECS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc----CC-CCccEEEEEECCCCCEEEEEeC
Confidence 3456899997 577777655555 66668876666655431 11 2223456788888776666543
No 175
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.36 E-value=5.1 Score=28.22 Aligned_cols=65 Identities=17% Similarity=0.060 Sum_probs=41.1
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+....+++.+ +++++++-...| |...|.++++...... ...+ .-..+..++++++|...++-+.
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG---GVEG-HRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC---STTS-CSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec---cccc-ccCceeEEEECCCCCEEEEecC
Confidence 34567899999 788777655444 7777887776544331 0011 1224578999999887776654
No 176
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=88.35 E-value=5 Score=28.88 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=41.5
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++++++++-...+ |...|..+++...... .+. ...+.++++|+|+.++|-+.
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~----~h~---~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT----GHE---SDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc----CCc---CCEEEEEEcCCCCEEEEEcC
Confidence 4456899999999888765544 6667877776433321 111 23578999999988887664
No 177
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=87.85 E-value=5.7 Score=29.10 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=39.4
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
+....+++.++|+++++-...+ |..+|.++++...... .+..-..+..+++.++|.++++-
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD-----RPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----CSSCSSSCCEEEECSTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec-----cCCCCCcceEEEEcCCCcEEEEe
Confidence 4567899999997766654444 7777887776433321 11111235788899988877765
No 178
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=87.71 E-value=5.5 Score=29.39 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=40.5
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEecccccc--CCC---------CCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEI--DGA---------KPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~--~g~---------~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..++|.++|+++++.....+...+.++|+........... +.. .-...+.++++++|...+|-+.
T Consensus 65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 4456899999999888755455666777677654332210000 000 0012568899999988777654
No 179
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.35 E-value=4.4 Score=28.77 Aligned_cols=63 Identities=6% Similarity=-0.106 Sum_probs=39.7
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |..++.++++.+.+... ..+. ...+.++++++|...++-+.
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~h~---~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL--KEHN---GQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE--ECCS---SCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee--cCCC---CcccEEEEeCCCCEEEEEcC
Confidence 4567899999998887765544 66667766653333221 1111 23568888888877766543
No 180
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.30 E-value=1.8 Score=34.38 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=40.6
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWS 76 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~T 76 (120)
..+..+++.++|++++++....|+.+|.++|+...+... ....-..+..++++|||. |.++
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~----~~~~~~~v~~~~~SpDg~~l~~~ 78 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEG----KKIESLRAIRYEISPDREYALFS 78 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECT----TTTTTTTCSEEEECTTSSEEEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEecc----ccccccccceEEECCCCCEEEEE
Confidence 458899999999865553223488889888887666531 111101367999999997 4444
No 181
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.20 E-value=2.3 Score=33.14 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=30.9
Q ss_pred eEECCCC--cEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEE
Q psy4774 17 MKFDKNG--ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYW 75 (120)
Q Consensus 17 l~~d~~G--~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~ 75 (120)
.++.++| .+|++....++..+|.++|+...+.. ..+ ++++++|||...+
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~----~~~------~~~~~spDG~~la 165 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR----LPG------FGFVSDIRGDLIA 165 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE----ESS------CEEEEEEETTEEE
T ss_pred eeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec----CCC------ceEEECCCCCEEE
Confidence 3445554 45666555566666877888777753 111 7888999986444
No 182
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=86.48 E-value=5.2 Score=29.13 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=38.1
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
.....+++.++|+++++-...| |..+|..+++...... ...-.....++++++|. +.++-+.
T Consensus 248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP------SKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC------CTTSSCEEEEEECSSCTTEEEEEET
T ss_pred CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc------cccCCCceeEEEeCCCCCEEEEEeC
Confidence 4456788899997777655544 7777877665433321 11112356788888876 5555443
No 183
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.36 E-value=2.4 Score=31.30 Aligned_cols=62 Identities=16% Similarity=0.086 Sum_probs=41.6
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
+....++|.|+|+++++-...++.+++..+++...... ..+ .-...+.++++++|...++-+
T Consensus 177 ~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~----~~~-~~~~v~~v~fspdg~~l~~~s 238 (365)
T 4h5i_A 177 GEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT----DFD-KNWSLSKINFIADDTVLIAAS 238 (365)
T ss_dssp SCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC----CCC-TTEEEEEEEEEETTEEEEEEE
T ss_pred CceEEEEEccCCceEEeccceeEEEEEeccCcceeeee----cCC-CCCCEEEEEEcCCCCEEEEEe
Confidence 45678999999998887666778888877776433321 111 112346788999987776644
No 184
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=86.34 E-value=3.6 Score=32.47 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=41.6
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.|..++++|+|+++++-....|...+.++++...... .+. ...+.++++|+|.+..|-+.
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~----~h~---~~v~~~~~spdg~~lasg~~ 79 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYT----EHS---HQTTVAKTSPSGYYCASGDV 79 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred cCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEec----CCC---CceEEEEECCCCcEEEEEeC
Confidence 478999999999987776444456667776555333321 121 13568999999988877664
No 185
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.32 E-value=5.9 Score=29.20 Aligned_cols=59 Identities=14% Similarity=0.020 Sum_probs=39.4
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-..++|.++|+++++-...+ |...|.++++...... .+. ...+.+++.++|...+|-+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~----~h~---~~v~~~~~~p~~~~l~s~s~ 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ----GHE---QDIYSLDYFPSGDKLVSGSG 185 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc----cCC---CCEEEEEEcCCCCEEEEecC
Confidence 34789999998877655555 6666887776543331 121 23568899999887777664
No 186
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=86.16 E-value=6.9 Score=27.41 Aligned_cols=61 Identities=21% Similarity=0.101 Sum_probs=40.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |...+..+++...... .+. ...+.++++++|++.+|-+.
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~----~h~---~~v~~~~~~~~~~~l~s~~~ 85 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHK---LGISDVAWSSDSNLLVSASD 85 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc----cCC---CceEEEEEcCCCCEEEEECC
Confidence 3456799999998777655544 6566776776554432 111 23568999999987777654
No 187
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=86.08 E-value=7.6 Score=27.86 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=40.9
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.++|+++++-...+ |...|.++++..... .+ .-.....++++++|...+|-+.
T Consensus 207 ~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~------~~-h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 207 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL------SG-HASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE------CC-CSSCEEEEEECTTSSEEEEEET
T ss_pred CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE------cC-CCCceEEEEECCCCCEEEEEeC
Confidence 3457899999998888766655 666787766543332 11 1123568999999987777664
No 188
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.31 E-value=5.2 Score=28.79 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=41.3
Q ss_pred CCCccceEECCCCcEEEEECCC---C-EEEEECCCCcEEEEeccccccCCC-------CCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYF---G-LYKVNVTTGQTEQLISMDTEIDGA-------KPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~---g-i~~vd~~~g~~~~~~~~~~~~~g~-------~~~~pndl~v~~~G~iy~TDs~ 79 (120)
......+++.++++++++-... + |..+|..+++........ ..... .-.....++++++|.+.++-+.
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP-THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccC-cccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 3556789999999887764444 4 677787766643332100 00000 1123568999999988777664
No 189
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.07 E-value=4.4 Score=32.13 Aligned_cols=59 Identities=5% Similarity=-0.026 Sum_probs=35.9
Q ss_pred ccceEECCCCcEEEEE-CC---------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 14 PLGMKFDKNGALHVAD-AY---------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d-~~---------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
...+++.|||+.+++. .. ..|+.+|.++++...+.. ..+ .-..+..++++|||. |.|+.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~----~~~-~~~~~~~~~~SPdG~~la~~~ 132 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP----PEV-SNAKLQYAGWGPKGQQLIFIF 132 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC----TTC-CSCCCSBCCBCSSTTCEEEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC----Ccc-ccccccccEECCCCCEEEEEE
Confidence 6789999999755542 21 237788888887655532 111 112356788888884 44443
No 190
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=84.80 E-value=7.5 Score=29.65 Aligned_cols=60 Identities=20% Similarity=0.152 Sum_probs=38.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.++|+++++-...+ |...+. +++...... .+. ...+.|+++++|.+.+|-+.
T Consensus 468 ~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~----~h~---~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 468 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT----GHS---SSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE----CCS---SCEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe----CCC---CCEEEEEEcCCCCEEEEEEC
Confidence 4456899999998888755555 555575 455332221 122 23578999999987776553
No 191
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.46 E-value=7.6 Score=28.39 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=38.1
Q ss_pred CCccceEECCCC-cEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNG-ALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G-~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.....+++.++| +++++-...+ |...|.++++...... ..+ .-.....++++++|..++|-+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~-~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG----PDV-HPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC----TTT-CCSCEEEEEECTTSSCEEEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe----cCC-CCCceEEEEECCCCCEEEEEe
Confidence 456789999998 5776644444 7777887776443321 011 112356788888887665554
No 192
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=84.46 E-value=2.8 Score=35.46 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=40.4
Q ss_pred CccceEECCCCcEEEE--EC----C-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVA--DA----Y-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~--d~----~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....+++.|||+.++. .. . ..|+.++.++|+...+....... .........+++++||.++|+-+.
T Consensus 54 ~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~-~~~~~~~~~~~~SpDg~ll~~~~~ 126 (1045)
T 1k32_A 54 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKS-TGRRMFTDVAGFDPDGNLIISTDA 126 (1045)
T ss_dssp EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEE-ETTEECSEEEEECTTCCEEEEECT
T ss_pred cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcc-cccccccccccCCCCCEEEEEECC
Confidence 3457899999975543 21 2 24888998888766653210000 001223468999999998887663
No 193
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=84.43 E-value=9.3 Score=27.43 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=40.6
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEecccccc--CCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEI--DGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~--~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
......+++.++| ++++-...+ |..+|..+++...... .. +...-..+..++++++|.++++-+.
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~h~~~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE---SQHSMINNSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE---CCC---CCCCCEEEEEECSSTTEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe---ccccccccCCccceEEECCCCCEEEEEec
Confidence 4667899999999 766655555 7777877665433321 10 1000223578999999887766553
No 194
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.43 E-value=7.3 Score=29.74 Aligned_cols=63 Identities=8% Similarity=0.072 Sum_probs=41.2
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC----------CCCEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS----------DGMVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~----------~G~iy~TDs~ 79 (120)
.+....+++.++|+++++-...+ |...+.++++..... .+..-...+.+++++ +|.+.+|-+.
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~------~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~ 561 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR------WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 561 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC------SCCCSSCEEEEEECCCC------CCSCCEEEEEET
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEe------ecCCCCceeEEEEcCccccccccccCCCEEEEEcC
Confidence 35567899999998887755444 777788777543221 221123457889988 8877776654
No 195
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=84.41 E-value=7.4 Score=29.69 Aligned_cols=60 Identities=20% Similarity=0.127 Sum_probs=38.0
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..|+|.|+|+++++-...+ |...|. +++..... ..+.. ....|+++|+|.+.+|-+.
T Consensus 17 ~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l----~gh~~---~V~~l~fspdg~~las~~~ 77 (577)
T 2ymu_A 17 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL----TGHSS---SVWGVAFSPDGQTIASASD 77 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE----ECCSS---CEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEE----eCCCC---CEEEEEECCCCCEEEEEeC
Confidence 4456899999998877655556 444575 45533222 11221 3468899999988777554
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=84.33 E-value=3.5 Score=29.36 Aligned_cols=54 Identities=7% Similarity=0.077 Sum_probs=36.5
Q ss_pred ccceEECCCCc-EEEEEC---------------------------CCCEEEEECCCCcE-EEEeccccccCCCCCcCCCc
Q psy4774 14 PLGMKFDKNGA-LHVADA---------------------------YFGLYKVNVTTGQT-EQLISMDTEIDGAKPQIPNS 64 (120)
Q Consensus 14 P~Gl~~d~~G~-l~V~d~---------------------------~~gi~~vd~~~g~~-~~~~~~~~~~~g~~~~~pnd 64 (120)
...+++.++|+ |+++.. ...|+.++.++|+. ..+. . + ....
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~----~----~--~~~~ 175 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE----K----P--RFSS 175 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE----E----E--TTCE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec----C----C--Cccc
Confidence 56789999995 544431 13488899888876 5553 1 1 4568
Q ss_pred eEEcCCCCEEEEeC
Q psy4774 65 VTVDSDGMVYWSDS 78 (120)
Q Consensus 65 l~v~~~G~iy~TDs 78 (120)
++++++| ++|+-+
T Consensus 176 ~~~spdg-~~~~~~ 188 (347)
T 2gop_A 176 GIWHRDK-IVVNVP 188 (347)
T ss_dssp EEEETTE-EEEEEE
T ss_pred ccCCCCe-EEEEEe
Confidence 8899999 777654
No 197
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=84.24 E-value=3.4 Score=29.12 Aligned_cols=62 Identities=11% Similarity=0.026 Sum_probs=41.8
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTK 81 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~ 81 (120)
....+++.++|+++++-...| |...|.++++..... .+ .-...+.++++++|...++-+...
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~-~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS------EQ-LDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC------CC-CSSCEEEEEECTTSSCEEEEECCC
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe------cC-CCCCceEEEECCCCCeEEEEeccc
Confidence 466899999997766654444 777788777543322 11 122467999999998777776543
No 198
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=84.07 E-value=9.9 Score=27.42 Aligned_cols=61 Identities=8% Similarity=0.035 Sum_probs=40.2
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs~ 79 (120)
.....+++.+ +++++++-...+ |...|.++++...... .+. .....++++++| .+++|-+.
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~----~~~---~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP----ARG---NWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE----CSS---SCCCCEEECTTCTTEEEECCS
T ss_pred CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec----CCC---CceEEEEECCCCCCEEEEEec
Confidence 4467899998 787777655444 6667877665432221 111 246799999998 78888764
No 199
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=84.03 E-value=8.4 Score=26.58 Aligned_cols=59 Identities=15% Similarity=0.136 Sum_probs=38.2
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+-|++.+++ ++++-....|...|.++|+....... ++ .-...+.++++++|+..+|-+.
T Consensus 29 ~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~----~~-~~~~V~~v~~~~~~~~l~sgs~ 87 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQM----EQ-PGEYISSVAWIKEGNYLAVGTS 87 (318)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEEC----CS-TTCCEEEEEECTTSSEEEEEET
T ss_pred eEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEe----cC-CCCeEEEEEECCCCCEEEEEEC
Confidence 457888776 54443334477779888887655431 11 2223578999999998887664
No 200
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=83.78 E-value=9.9 Score=27.23 Aligned_cols=65 Identities=6% Similarity=0.025 Sum_probs=35.2
Q ss_pred CCccceEECCCCc-EEEEECCCC-EEEEEC----CCCc-------EEEEeccccccCCC-----CCcCCCceEEcCCCCE
Q psy4774 12 GRPLGMKFDKNGA-LHVADAYFG-LYKVNV----TTGQ-------TEQLISMDTEIDGA-----KPQIPNSVTVDSDGMV 73 (120)
Q Consensus 12 g~P~Gl~~d~~G~-l~V~d~~~g-i~~vd~----~~g~-------~~~~~~~~~~~~g~-----~~~~pndl~v~~~G~i 73 (120)
+....+++.++|. ++++-...+ |...+. ++++ ...+.. ...+. .-.....++++++|.+
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH---PFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC---CCCCC------CBCEEEEEECTTSSE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc---cccccccccCCCCceEEEEEcCCCCE
Confidence 5567899999998 777655444 555555 5565 122211 11111 1224568888888876
Q ss_pred EEEeCC
Q psy4774 74 YWSDSS 79 (120)
Q Consensus 74 y~TDs~ 79 (120)
.++-+.
T Consensus 123 l~~~~~ 128 (425)
T 1r5m_A 123 IVTGVE 128 (425)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 665443
No 201
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.66 E-value=8.5 Score=26.39 Aligned_cols=61 Identities=8% Similarity=-0.008 Sum_probs=37.9
Q ss_pred CCCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
......+++.+++.++++.....|..+|.++++...... .+. ...+.++++++|.++....
T Consensus 184 ~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~----~~~---~~i~~~~~~~~~~l~~~~~ 244 (313)
T 3odt_A 184 NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE----GHE---SFVYCIKLLPNGDIVSCGE 244 (313)
T ss_dssp SSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE----CCS---SCEEEEEECTTSCEEEEET
T ss_pred cccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh----cCC---ceEEEEEEecCCCEEEEec
Confidence 455678999999986555544447778887776443321 111 2356788888876555444
No 202
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=83.54 E-value=7 Score=29.85 Aligned_cols=62 Identities=11% Similarity=0.060 Sum_probs=41.1
Q ss_pred CCCCccceEECCCCcEEEEECCCCEEEEECCCC----c-EEEEeccccccCCCCCcC-CCceEEcC--CCCEEEEeCC
Q psy4774 10 QCGRPLGMKFDKNGALHVADAYFGLYKVNVTTG----Q-TEQLISMDTEIDGAKPQI-PNSVTVDS--DGMVYWSDSS 79 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g----~-~~~~~~~~~~~~g~~~~~-pndl~v~~--~G~iy~TDs~ 79 (120)
..+.+..+++.++|+++++-....|...+.+++ + ...+. +.. .. .+.+++++ +|.+.+|-+.
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~-------~h~-~~~v~~~~~sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFT-------GHG-SSVVTTVKFSPIKGSQYLCSGDE 86 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEEC-------TTT-TSCEEEEEECSSTTCCEEEEEET
T ss_pred ccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEe-------cCC-CceEEEEEECcCCCCCEEEEecC
Confidence 347788999999998777644444777777766 3 33331 111 13 57899999 9987776554
No 203
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.46 E-value=5 Score=28.46 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=37.5
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
+....+++.++|+++++-...+ |...|.++++....... ... -..+..++++++|...++-+
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~---~~~v~~~~~~~~~~~l~~~~ 115 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI--LRI---NRAARCVRWAPNEKKFAVGS 115 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC--CCC---SSCEEEEEECTTSSEEEEEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe--ecC---CCceeEEEECCCCCEEEEEe
Confidence 4567899999998777644444 66666666664333211 111 12356888888886665544
No 204
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.36 E-value=7.4 Score=28.08 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=37.7
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.-..+++.++|+++++-...+ |...+..+++.+.+.. ..+. -...+.++++++|++.+|-+.
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~----~~~h-~~~v~~v~~sp~~~~l~s~s~ 125 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT----LEGH-ENEVKSVAWAPSGNLLATCSR 125 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE----ECCC-SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE----ccCC-CCCceEEEEeCCCCEEEEEEC
Confidence 346799999998877655444 4444544454433322 1221 123578999999988887664
No 205
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.25 E-value=6.9 Score=28.43 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=39.5
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++|+++++-...+ |...|.++++...... .+. .....++++++|...+|-+.
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----~h~---~~v~~~~~~~~~~~l~s~~~ 201 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI----GHR---ATVTDIAIIDRGRNVLSASL 201 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE----CCS---SCEEEEEEETTTTEEEEEET
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc----CCC---CcEEEEEEcCCCCEEEEEcC
Confidence 4567899999998777655544 6667876665322221 111 23568999999987776654
No 206
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=83.01 E-value=9.9 Score=26.63 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=36.8
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEE--cCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTV--DSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v--~~~G~iy~TDs 78 (120)
+....+++.++|+++++-...| |...|.++++...+.. ... ..+.+.+ +++|.++++-+
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~---~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ-----HDA---PVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-----CSS---CEEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc-----ccC---ceEEEEEEeCCCCCEEEEcc
Confidence 4567899999998777655555 6667887776554432 222 2356666 66666555544
No 207
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=82.88 E-value=7.2 Score=27.53 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=38.4
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-.+++|.|+|.++++-...| |...|.++++...... ....+ .+.+.+.++|+..+|-+.
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~----~~~~~---v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ----VTETP---VRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----CCSSC---EEEEEEEGGGTEEEEEET
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee----ccCCc---EEEEEEeCCCCEEEEECC
Confidence 4567899999998887755555 5556877665332221 12212 356777777776666554
No 208
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=82.85 E-value=3.9 Score=30.03 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=36.0
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
..++|.+++.|+++....-|...|.++++....... ...+- -...+.|+++++|+..+|-+.
T Consensus 86 ~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~--~~~~H-~~~V~~v~~spdg~~l~sgs~ 147 (344)
T 4gqb_B 86 ADLTWVGERGILVASDSGAVELWELDENETLIVSKF--CKYEH-DDIVSTVSVLSSGTQAVSGSK 147 (344)
T ss_dssp EEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEE--EEECC-SSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeec--cccCC-CCCEEEEEECCCCCEEEEEeC
Confidence 468899998877665433355557666653222110 00111 123568999999988887664
No 209
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.80 E-value=4.3 Score=29.40 Aligned_cols=63 Identities=13% Similarity=-0.059 Sum_probs=36.8
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.-..+++.|+|+++++-...+ |...+.++++...... ...+ --...+.++++|+|+..+|-+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~---~~~~-h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV---LSEG-HQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE---ECSS-CSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee---eccc-cCCcEEEEEECCCCCEEEEEEC
Confidence 455799999998887655544 4444555554321110 0011 1123568889998887776553
No 210
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.74 E-value=9 Score=26.86 Aligned_cols=60 Identities=13% Similarity=0.137 Sum_probs=37.4
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCC-CcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTT-GQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~-g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....+++.++|+++++-...| |..+|..+ ++...... ... .....++++++|...++-+.
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~---~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID----LHE---KSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe----cCC---CceeEEEECCCCCEEEEecC
Confidence 567889999997776644444 77788765 33322221 111 23568888888876666543
No 211
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=82.34 E-value=2.5 Score=31.00 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=32.3
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-..++|.+++.++++.....|...|..+++....... ...+ --...+.|+++++|+..+|-+.
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~--~~~~-h~~~V~~v~~spdg~~l~sgs~ 159 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKF--AKYE-HDDIVKTLSVFSDGTQAVSGGK 159 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCE--EECC-CSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEee--ccCC-CCCCEEEEEECCCCCEEEEEeC
Confidence 3568999999888875533355556655543222110 0111 1123568889999887777554
No 212
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.19 E-value=12 Score=27.41 Aligned_cols=63 Identities=6% Similarity=0.030 Sum_probs=40.0
Q ss_pred CCccceEECCCCcEEEEEC--CCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADA--YFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~--~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++|+.+++-. ..| |..++..+++....... .+ .-.....++++++|...+|-+.
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~----~~-h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI----PA-HDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE----EC-CSSCCCEEEECTTSSEEEEECT
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe----cC-CCCCEEEEEECCCCCEEEEEeC
Confidence 4567899999997776632 344 55556555655544321 11 1124678999999988887664
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=81.98 E-value=6.4 Score=31.49 Aligned_cols=61 Identities=15% Similarity=0.072 Sum_probs=38.6
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.++..++++.|+|.++++-...| |...|.++++...... .+.. ....++++++|...++-+
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~----~~~~---~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ----VTET---PVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----CCSS---CEEEEEEEGGGTEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe----cCCC---cEEEEEEeCCCCEEEEEe
Confidence 46678999999998777655555 6667876775433321 1222 246788888876554443
No 214
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.92 E-value=9.1 Score=26.85 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=39.0
Q ss_pred CccceEECCC--CcEEEEECCCC-EEEEECCCCcEE--EEeccccccCCC-CCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKN--GALHVADAYFG-LYKVNVTTGQTE--QLISMDTEIDGA-KPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~--G~l~V~d~~~g-i~~vd~~~g~~~--~~~~~~~~~~g~-~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....+++.++ |+++++-...| |...|.++++.. .+.. ..+. .-...+.++++++|.+.+|-+.
T Consensus 287 ~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 287 DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTT----LTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEE----ECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceE----EcccccCCceEEEEeCCCCCeEEEEeC
Confidence 4556778777 88888766555 666677665321 1111 1111 1234679999999988887664
No 215
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=81.86 E-value=11 Score=26.33 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=36.8
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....+++.++|+++++-...+ |...|..+++...... .... ...+.++++++|...++-+.
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI---DDDN---PPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---CSSC---CCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe---ccCC---CceEEEEECCCCCEEEEEcC
Confidence 346789999998777655544 6667877665432221 1111 12356888888876665443
No 216
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.72 E-value=10 Score=27.15 Aligned_cols=60 Identities=10% Similarity=0.006 Sum_probs=38.5
Q ss_pred CCccceEECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.++| ++++... ..|..+|.++++...... ... ..+..++++++|.++++-+.
T Consensus 290 ~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~---~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 290 QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI----VDG---VPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE----CTT---CCEEEEEECTTSSEEEEEET
T ss_pred ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc----cCC---ccEEEEEEcCCCCEEEEEEC
Confidence 456789999999 5444344 447777887776443331 112 23568999999987777654
No 217
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=81.66 E-value=13 Score=27.00 Aligned_cols=63 Identities=8% Similarity=0.056 Sum_probs=39.1
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.|+|+++++-...+ |...|..+++...... ..........++++++|.+.++-+.
T Consensus 241 ~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-----~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 241 SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS-----KESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----CTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-----CCCcccceeEEEEeCCCCEEEEEEC
Confidence 4456899999998877755555 6666776554333321 1111223467889998887776553
No 218
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=81.35 E-value=4.5 Score=32.54 Aligned_cols=62 Identities=11% Similarity=0.147 Sum_probs=42.4
Q ss_pred CccceEECC-CCcEEEEECC------------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 13 RPLGMKFDK-NGALHVADAY------------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 13 ~P~Gl~~d~-~G~l~V~d~~------------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
.+...++.+ +|+|||.-.. ..+..+|+.+++++.+... ...+-.++..+++..+|.||+.-.
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~----~~~~~~~~~~~~~~~~g~lyv~GG 261 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT----VTKHDMFCPGISMDGNGQIVVTGG 261 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE----ECSCCCSSCEEEECTTSCEEEECS
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc----CCCCCCccccccCCCCCCEEEeCC
Confidence 456778877 8899998421 1278889988887666432 122234566788889999998865
No 219
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=81.23 E-value=14 Score=29.11 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=42.1
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEecccc-ccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDT-EIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~-~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....++|.|+|+++++-...+ |...|..+++......... ...+ --.....++++|+|...+|-+.
T Consensus 191 ~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA-HSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS-SSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccc-cCCCEEEEEECCCCCEEEEEeC
Confidence 3456899999999888755555 6666877776543321000 0001 1124578999999998888765
No 220
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=80.87 E-value=3.7 Score=33.32 Aligned_cols=54 Identities=9% Similarity=0.014 Sum_probs=29.7
Q ss_pred ceEECCCCcEEEEEC--CC---CEEEEECCCCc-------EEEEeccccccCCCCCc--CCCceEEcCCCC
Q psy4774 16 GMKFDKNGALHVADA--YF---GLYKVNVTTGQ-------TEQLISMDTEIDGAKPQ--IPNSVTVDSDGM 72 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~--~~---gi~~vd~~~g~-------~~~~~~~~~~~~g~~~~--~pndl~v~~~G~ 72 (120)
.+++.+||++++.-. .. .|+.+|.++|+ +..+.. +.+..-.. .+...++++||.
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~---~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE---MSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE---ECSSSCSSSSSCCCCEECTTSS
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee---ccCCceEccCcCCCceEcCCCC
Confidence 467889998655432 21 27778887776 222211 11111111 145788999986
No 221
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=80.24 E-value=5.4 Score=29.69 Aligned_cols=60 Identities=15% Similarity=0.084 Sum_probs=40.8
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....++|.+++.++++-...+ |...|.++++...... .+. ...+.++++++|.+.+|-+.
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~----~h~---~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK----GHT---DSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----ccC---CcEEEEEEcCCCCEEEEEeC
Confidence 345789999998888755544 6677877776433321 111 23578999999998887664
No 222
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.88 E-value=7 Score=28.03 Aligned_cols=59 Identities=12% Similarity=0.025 Sum_probs=39.2
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEE--EEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTE--QLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~--~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
....+++.++|.++++-...| |...|.++++.. .+. ..+. ...+.++++++|...++-+
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~----~~h~---~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP----VDEE---AKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC----CCTT---SCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe----ccCC---CCEEEEEEeCCCCEEEEEe
Confidence 467899999999988755555 666787777643 221 1011 2457889999987666654
No 223
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=79.69 E-value=3.7 Score=29.20 Aligned_cols=56 Identities=7% Similarity=0.093 Sum_probs=37.1
Q ss_pred CccceEECCCCcEEE-E-ECC----CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 13 RPLGMKFDKNGALHV-A-DAY----FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V-~-d~~----~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
....+++.|+|+.++ + +.. ..|+.++.++|+...+... .+ ...++++|||. |+|+-
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~----~~-----~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA----KN-----IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE----SE-----EEEEEECTTSSEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC----CC-----ccceeECCCCCEEEEEE
Confidence 455689999996433 3 221 2389999888887766531 11 56889999985 66664
No 224
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=79.53 E-value=15 Score=26.85 Aligned_cols=60 Identities=10% Similarity=-0.039 Sum_probs=36.9
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs 78 (120)
+.-..++|.++|+++++-...+ |...|.++++...... .+. ...+.+++.+++ ++++|-+
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~----~h~---~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR----AHA---AQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----CCS---SCEEEEEECSSCTTEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc----CcC---CceEEEEecCCCCCceeeec
Confidence 3456899999998887755555 6667887776433221 111 224567777765 4666544
No 225
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=79.41 E-value=6.7 Score=27.48 Aligned_cols=60 Identities=8% Similarity=-0.056 Sum_probs=34.9
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCCCc----EEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQ----TEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~----~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs 78 (120)
.+....+++.++|+++++-...+ |...+.++++ ...+.. .. ...+.++++++|. ..++-+
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-----~~---~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-----YK---HPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-----CS---SCEEEEEEEESSSEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee-----cC---CceEEEEECCCCCcEEEEEc
Confidence 35567899999998776654444 4444544444 322221 11 2356788888887 444433
No 226
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.35 E-value=3.3 Score=29.76 Aligned_cols=63 Identities=8% Similarity=-0.027 Sum_probs=38.0
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |...+.++++...+.. ..+ .-...+.++++++|+..+|-+.
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~-h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHART----FSD-HDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCC----BCC-CSSCEEEEEECTTTCCEEEEET
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEE----Eec-CCceEEEEEEeCCCCEEEEEeC
Confidence 4567899999998877654444 5555554553333322 122 1123568889998876666553
No 227
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=79.27 E-value=9.7 Score=32.19 Aligned_cols=58 Identities=19% Similarity=0.410 Sum_probs=40.0
Q ss_pred CCccceEECCCCcEEEE-ECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEE
Q psy4774 12 GRPLGMKFDKNGALHVA-DAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWS 76 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~-d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~T 76 (120)
..+..+++.++|+.+++ .....|+.+|.++|+...+.. . .. .....++++|||. |.++
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~---~-~~---~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER---S-RE---AMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---C-SS---SCCCCEEECTTSCEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc---C-CC---CCccceEECCCCCeEEEE
Confidence 45678999999976654 443459999998888777652 1 11 2346899999986 4444
No 228
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=79.19 E-value=7.5 Score=29.09 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=34.0
Q ss_pred CccceEECCCCcEE-EEECCCC-EEEEECC--CCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 13 RPLGMKFDKNGALH-VADAYFG-LYKVNVT--TGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~-V~d~~~g-i~~vd~~--~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
....+++.++|+.+ ++....+ |...+.. +++....... .... ..++.++++++|...++-
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~---~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR--FCFS---KRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE--EECS---SCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec--ccCC---CCceEEEEcCCCCEEEEE
Confidence 46789999999875 5544444 4444544 4543333210 0111 235788999988654443
No 229
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=78.80 E-value=15 Score=26.34 Aligned_cols=63 Identities=16% Similarity=0.098 Sum_probs=38.2
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.+ +++++++-...+ |...|.++..+..+.. ..+ .-.....++++++|...++-+.
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~-~~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK----TDS-WDYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC----CCC-SSCCEEEEEEETTTTEEEEEET
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec----cCC-CCCCeEEEEECCCCCEEEEECC
Confidence 4456899999 566666544444 6667876555555532 111 1133568888888876666553
No 230
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=78.37 E-value=18 Score=26.81 Aligned_cols=62 Identities=10% Similarity=0.101 Sum_probs=38.0
Q ss_pred CccceEECCC-CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 13 RPLGMKFDKN-GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~-G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
+-..|+|.|. ++++++-...| |...|.++++...+.. ..| --...+.|+++| +|++.+|-+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~----~~g-H~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK----GIG-AGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC----CCS-SSCCCCEEEECSSCTTEEEEECS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE----ccC-CCCCEEEEEEeCCCCCEEEEEeC
Confidence 4567999984 57776655555 6666766565444432 112 112467899997 6788887664
No 231
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=78.25 E-value=11 Score=27.02 Aligned_cols=60 Identities=5% Similarity=-0.099 Sum_probs=38.4
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
.....+++.++++++++-...+ |...|.+...+..+.. +. .....++++++|. +++|-+.
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----h~---~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL-----HK---AKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC-----SS---SCEEEEEECSSCTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc-----CC---CcEEEEEECCCCCCEEEEEeC
Confidence 3467899999998777655544 6667874333333321 11 2457889999887 7777654
No 232
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=78.24 E-value=12 Score=30.01 Aligned_cols=23 Identities=26% Similarity=0.603 Sum_probs=19.4
Q ss_pred CCcEEEEECCCCEEEEECCCCcE
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
+|.|||+....+|+.+|.++|+.
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~ 90 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKR 90 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCE
T ss_pred CCEEEEEcCCCCEEEEECCCCcE
Confidence 68999998755699999999985
No 233
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=77.58 E-value=26 Score=28.07 Aligned_cols=59 Identities=20% Similarity=0.099 Sum_probs=41.1
Q ss_pred ccceEECCCCcEEEEECC--CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 14 PLGMKFDKNGALHVADAY--FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~--~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
..+.++..+|+|||.-.. ..+.++|+++++++.+... ... ..-...++-++|.||+.-.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~----~~~--R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM----QVA--RGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC----SSC--CSSCEEEECTTSCEEEECC
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC----Ccc--ccccceEEecCCeEEEEeC
Confidence 345777889999998653 3499999988887776431 111 2235677778899998765
No 234
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.56 E-value=13 Score=26.22 Aligned_cols=62 Identities=8% Similarity=-0.025 Sum_probs=36.1
Q ss_pred CCccceEECCC---CcEEEEECCCC-EEEEECCCCc---EEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKN---GALHVADAYFG-LYKVNVTTGQ---TEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~---G~l~V~d~~~g-i~~vd~~~g~---~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
+....+++.++ ++++++-...| |...|..+++ ...+.. ... .-.....++++++|...++-+
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~-~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLK----EEK-FPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS----SSC-CSSCEEEEEECSSSCCEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeec----ccc-CCCcEEEEEEcCCCCEEEEec
Confidence 44568999999 77777655444 5556655543 222321 111 122356889999987555543
No 235
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=77.30 E-value=13 Score=27.11 Aligned_cols=60 Identities=8% Similarity=-0.030 Sum_probs=36.4
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs 78 (120)
+.-..+++.++|+++++-...+ |...|.++++...... .+. ...+.+++.+++ .++++-+
T Consensus 140 ~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~----~h~---~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN----AHS---SEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC----CCS---SCEEEEEECTTCSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc----CCC---CCEEEEEEccCCCceeeeec
Confidence 3456799999998877655544 6667887776443331 111 234567777765 3555544
No 236
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=76.62 E-value=15 Score=26.12 Aligned_cols=66 Identities=14% Similarity=0.145 Sum_probs=38.7
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCC---CCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGA---KPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~---~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....++|.++|.++++-...++..++.+.+....-... ...+. .-.....++++|+|...++-+.
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRP--EFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECC--CCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCc--cccccccCcCcceeEEEECCCCCEEEEeec
Confidence 345679999999888776556666666543332211110 11111 1122457999999988887664
No 237
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=75.91 E-value=19 Score=25.81 Aligned_cols=65 Identities=5% Similarity=0.025 Sum_probs=41.1
Q ss_pred CCCccceEECCC-CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCC---CcCCCceEEcCCC-CEEEEeCC
Q psy4774 11 CGRPLGMKFDKN-GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAK---PQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~-G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~---~~~pndl~v~~~G-~iy~TDs~ 79 (120)
.+....+++.++ +.++++-...+ |...|.++++...... ..... -..++.++++++| .++++-+.
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS----YTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC----CCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe----ccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 345678999999 67777755555 7778887776443332 11100 2346789999987 56665543
No 238
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=75.51 E-value=17 Score=25.28 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=34.9
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCCcEEEEecccc--ccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDT--EIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~--~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...+++.+++.++++.....|...|.+++....-..... ..........+.++++++|...+|-+.
T Consensus 259 v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 259 INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp EEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred EEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 456777777777665443446666765543321111000 000001223567889999988887553
No 239
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=75.32 E-value=11 Score=27.99 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=35.9
Q ss_pred ceEECC---CCcEEEEECCCCEEEEECCCCcEEEEeccccccC-----------CCCCcCCCceEEcC--CCCEEEEeC
Q psy4774 16 GMKFDK---NGALHVADAYFGLYKVNVTTGQTEQLISMDTEID-----------GAKPQIPNSVTVDS--DGMVYWSDS 78 (120)
Q Consensus 16 Gl~~d~---~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~-----------g~~~~~pndl~v~~--~G~iy~TDs 78 (120)
.|++++ .+.||+.....+|++-+..+...+.+........ +........|++++ .+.||+...
T Consensus 119 ~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~ 197 (394)
T 3b7f_A 119 WLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS 197 (394)
T ss_dssp EEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE
T ss_pred EEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC
Confidence 578885 6799997666779988764344555432100000 11112234788886 367887754
No 240
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=74.04 E-value=24 Score=25.98 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=36.5
Q ss_pred ceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
=|++.+++ ++.+-....|+..|.++|++..+... ++ .-.....|+++++|+..++-+.
T Consensus 110 ~l~wS~~n-~lAvgld~tV~lWd~~tg~~~~~~~~----~~-~~~~V~sv~fspdg~~lasgs~ 167 (420)
T 4gga_A 110 LVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQM----EQ-PGEYISSVAWIKEGNYLAVGTS 167 (420)
T ss_dssp CEEECTTS-EEEEEETTEEEEEETTTCCEEEEEEC----CS-TTCCEEEEEECTTSSEEEEEET
T ss_pred eEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEe----cC-CCCcEEEEEECCCCCEEEEEEC
Confidence 35666554 44433334477789888987766531 11 1224578999999988877654
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=73.66 E-value=20 Score=28.54 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=22.4
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCCCcEE
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~ 45 (120)
.+++++ ++.|||......|+.+|.++|++.
T Consensus 109 ~~~~~~-~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 109 RGLAYG-AGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp CCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccEEE-CCEEEEEeCCCEEEEEECCCCCEE
Confidence 356665 578998865556999999899753
No 242
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=73.11 E-value=28 Score=29.51 Aligned_cols=61 Identities=15% Similarity=0.003 Sum_probs=39.9
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...| |...|..+++...-.. .+. .....++++++|...+|-+.
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~----~h~---~~v~~~~~s~~~~~l~s~~~ 677 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK----AHE---DEVLCCAFSSDDSYIATCSA 677 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec----cCC---CCEEEEEEecCCCEEEEEeC
Confidence 4456789999998877655544 7777877776433221 111 23568899999887776554
No 243
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=72.96 E-value=17 Score=26.88 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=35.2
Q ss_pred CCccceEECC--CCcEEEEECCC----CEEEEECCCCcEEEEeccccccCCC-------CCcCCCceEEcC---CCCEEE
Q psy4774 12 GRPLGMKFDK--NGALHVADAYF----GLYKVNVTTGQTEQLISMDTEIDGA-------KPQIPNSVTVDS---DGMVYW 75 (120)
Q Consensus 12 g~P~Gl~~d~--~G~l~V~d~~~----gi~~vd~~~g~~~~~~~~~~~~~g~-------~~~~pndl~v~~---~G~iy~ 75 (120)
.....|++|+ .+.||++-... +|++.+..+...+.+... ...... .+.....|++++ .+.||+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRP-PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBC-CCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCcc-ccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 3456799998 78999985433 688876533344544210 001111 111223577875 578887
Q ss_pred E
Q psy4774 76 S 76 (120)
Q Consensus 76 T 76 (120)
.
T Consensus 134 g 134 (394)
T 3b7f_A 134 G 134 (394)
T ss_dssp E
T ss_pred E
Confidence 4
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=72.93 E-value=19 Score=29.12 Aligned_cols=23 Identities=9% Similarity=0.293 Sum_probs=19.1
Q ss_pred CCcEEEEEC-CCCEEEEEC-CCCcE
Q psy4774 22 NGALHVADA-YFGLYKVNV-TTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~-~~gi~~vd~-~~g~~ 44 (120)
+|.|||+.. ...|+.+|. ++|+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~ 86 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTI 86 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcE
Confidence 578999987 566999999 88974
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=72.86 E-value=9.4 Score=31.10 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=19.1
Q ss_pred CCcEEEEECCCCEEEEECCCCcE
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
+|.|||+.....|+.+|.++|+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~ 99 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNR 99 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEE
T ss_pred CCEEEEECCCCeEEEEECCCCcE
Confidence 67899997656699999999974
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=71.98 E-value=13 Score=27.56 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=19.1
Q ss_pred eEECCCCcEEEEECCCCEEEEECCCCcEE
Q psy4774 17 MKFDKNGALHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 17 l~~d~~G~l~V~d~~~gi~~vd~~~g~~~ 45 (120)
.+++ ++.||++.....|+.+|.++|+..
T Consensus 5 P~v~-~~~v~~gs~dg~v~a~d~~tG~~~ 32 (369)
T 2hz6_A 5 VTLP-ETLLFVSTLDGSLHAVSKRTGSIK 32 (369)
T ss_dssp ---C-TTEEEEEETTSEEEEEETTTCCEE
T ss_pred Ceee-CCEEEEEcCCCEEEEEECCCCCEE
Confidence 3443 568888876556999998889754
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=71.85 E-value=11 Score=30.48 Aligned_cols=23 Identities=13% Similarity=0.371 Sum_probs=19.3
Q ss_pred CCcEEEEECCCCEEEEECCCCcE
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
+|.|||+.....|+.+|.++|+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~ 88 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKE 88 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCE
T ss_pred CCEEEEECCCCeEEEEECCCChh
Confidence 67999998766699999989974
No 248
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=71.64 E-value=21 Score=24.92 Aligned_cols=52 Identities=10% Similarity=-0.047 Sum_probs=31.2
Q ss_pred ECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC---CCCEEEEeC
Q psy4774 19 FDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS---DGMVYWSDS 78 (120)
Q Consensus 19 ~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~---~G~iy~TDs 78 (120)
+.++++++++-...+ |..+|.++++...... .. ...+.+++++ +|..+++-+
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~---~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETN-----IK---NGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-----CS---SCEEEEEESCSSSSCCEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecC-----CC---CceEEEEcCCCCCCCCEEEEEC
Confidence 678888777655544 7777887776543321 11 1346778887 666555544
No 249
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=71.54 E-value=17 Score=26.96 Aligned_cols=66 Identities=8% Similarity=0.080 Sum_probs=37.3
Q ss_pred CCccceEECCCCc-EEEEECCCC-EEEEECCCCcE--EEEeccccccCCCCCcCCCceEEcC-CCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGA-LHVADAYFG-LYKVNVTTGQT--EQLISMDTEIDGAKPQIPNSVTVDS-DGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~-l~V~d~~~g-i~~vd~~~g~~--~~~~~~~~~~~g~~~~~pndl~v~~-~G~iy~TDs~ 79 (120)
+...+|++.+++. ++++-...| |...+..++.. ..+... ....+ .-..++++++++ ++.++++.+.
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~-h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK-NIFTG-HTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS-EEECC-CSSCEEEEEECSSCTTEEEEEET
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc-eeecC-CCCCEeeeEEeCCCCCEEEEEeC
Confidence 4568899999987 777655545 66667654221 011000 01111 112357888888 5677777664
No 250
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=71.20 E-value=10 Score=26.53 Aligned_cols=26 Identities=8% Similarity=-0.019 Sum_probs=15.7
Q ss_pred EECCCCcEEEEECCCC-EEEEECCCCc
Q psy4774 18 KFDKNGALHVADAYFG-LYKVNVTTGQ 43 (120)
Q Consensus 18 ~~d~~G~l~V~d~~~g-i~~vd~~~g~ 43 (120)
++.++++++++-...+ |...|.++++
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 5577887776654444 6666766554
No 251
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=71.19 E-value=17 Score=25.35 Aligned_cols=68 Identities=6% Similarity=-0.076 Sum_probs=35.4
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCC------c-EEEEeccccccCC-CCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTG------Q-TEQLISMDTEIDG-AKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g------~-~~~~~~~~~~~~g-~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.+ +++++++-...| |...+.+.+ + ...+........+ ......+.++++++|.+.++-+.
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 4567899999 888877755555 333333222 2 2233210000000 01124678899998876555443
No 252
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=71.16 E-value=9 Score=30.47 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=39.9
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWS 76 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~T 76 (120)
..+-.+++.++|.++.+.....|+.+|.++|+...+.... .... .....++++|||. |.++
T Consensus 16 ~~~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~SpDg~~la~~ 77 (719)
T 1z68_A 16 YKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNR---TMKS-VNASNYGLSPDRQFVYLE 77 (719)
T ss_dssp CCCCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHH---HHHT-TTCSEEEECTTSSEEEEE
T ss_pred CCCCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccc---cccc-cceeeEEECCCCCeEEEE
Confidence 3455889999997665554345999999889887776421 0000 1257889999986 4443
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=71.15 E-value=25 Score=28.47 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=22.8
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCCcEE
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~ 45 (120)
..|++++ ++.||+......|+.+|.++|++.
T Consensus 110 ~~~~~~~-~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 110 NRGVALW-GDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp CCCCEEE-BTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceEEE-CCEEEEEcCCCEEEEEECCCCCEe
Confidence 3466775 578998865556999999999853
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=70.84 E-value=26 Score=28.49 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=22.8
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCCCcEE
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~ 45 (120)
.|++++ ++.||+......|+.+|.++|++.
T Consensus 122 ~~~a~~-~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 122 RGVALW-KGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp CCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCceEE-CCEEEEEcCCCEEEEEECCCCCEE
Confidence 467775 578998865556999999999853
No 255
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=70.66 E-value=25 Score=24.84 Aligned_cols=60 Identities=22% Similarity=0.148 Sum_probs=39.4
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.-..+++.++|+++++-...+ |...|.++++...... .+. ...+.++++++|.+.+|-+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~----~h~---~~v~~~~~~~~~~~l~s~s~ 127 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV----GHK---SDVMSVDIDKKASMIISGSR 127 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CCS---SCEEEEEECTTSCEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc----cCC---CcEEEEEEcCCCCEEEEEeC
Confidence 345689999998877755555 6666887776432221 111 23568889999888877664
No 256
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=70.42 E-value=26 Score=24.93 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=38.2
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-..+++.+++.++++-...+ |...|.++++...... .+. .....++++++|+..+|-+.
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~----~h~---~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV----GHQ---SEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE----CCC---SCEEEEEECSSTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc----CCC---CcEEEEEECCCCCEEEEEcC
Confidence 45789999998887765555 5556877776432221 122 13468899999887776553
No 257
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=69.90 E-value=31 Score=25.48 Aligned_cols=61 Identities=18% Similarity=0.074 Sum_probs=39.7
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+.+++-...+ |...|.++++...... .+. ...+.+.++++|.+++|-+.
T Consensus 193 ~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~----~h~---~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT----GHR---EWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----CCS---SCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----CCC---ccEEEEEECCCCCEEEEEcC
Confidence 3456789999998877655555 6667877776432221 111 23467888888888877664
No 258
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.51 E-value=24 Score=24.10 Aligned_cols=63 Identities=13% Similarity=-0.054 Sum_probs=34.6
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCC--cEEEEeccccccCCCCCcCCCceEEcC--CCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTG--QTEQLISMDTEIDGAKPQIPNSVTVDS--DGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g--~~~~~~~~~~~~~g~~~~~pndl~v~~--~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...| |...+.+++ ..+.+... ..+. .....+++.+ +|.+.+|-+.
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~---~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW--RAHD---SSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE--ECCS---SCEEEEEECCGGGCSEEEEEET
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee--ccCC---CcEEEEEEcCCCCCCEEEEEcC
Confidence 5567899999998777655555 444454433 22222211 1111 1245777777 4666665543
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=68.83 E-value=22 Score=28.24 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=19.1
Q ss_pred CCcEEEEEC-CCCEEEEEC-CCCcE
Q psy4774 22 NGALHVADA-YFGLYKVNV-TTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~-~~gi~~vd~-~~g~~ 44 (120)
+|.|||+.. ...|+.+|. ++|+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~ 86 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKI 86 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccE
Confidence 678999977 456999999 88985
No 260
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=68.79 E-value=23 Score=24.82 Aligned_cols=59 Identities=15% Similarity=-0.004 Sum_probs=38.8
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-..+++.++++++++-...+ |...|.++++...... .+. ...+.+++.|++.+.+|-+.
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~----~h~---~~v~~~~~~~~~~~l~sgs~ 117 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE----AHP---DYIRSIAVHPTKPYVLSGSD 117 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE----CCS---SCEEEEEECSSSSEEEEEET
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe----CCC---CcEEEEEEcCCCCEEEEECC
Confidence 35688889998877655555 6666877776433321 121 23568899999888777664
No 261
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=68.10 E-value=32 Score=27.94 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=22.2
Q ss_pred cceEECCCCcEEEEECCCCEEEEECCCCcEE
Q psy4774 15 LGMKFDKNGALHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~ 45 (120)
.|++++ ++.||+......|+.+|.++|++.
T Consensus 115 ~~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 115 RGVAVW-KGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp CCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CccEEE-CCEEEEEccCCEEEEEECCCCCEe
Confidence 456665 578998865556999999999853
No 262
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=67.78 E-value=32 Score=24.93 Aligned_cols=67 Identities=3% Similarity=0.026 Sum_probs=38.1
Q ss_pred CCCccceEECCCCcEEEEECCCC-EEEEECCC-CcEEEEecccc-ccCCCCCcCCCceEEcCCC-CEEEEeCC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYFG-LYKVNVTT-GQTEQLISMDT-EIDGAKPQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~-g~~~~~~~~~~-~~~g~~~~~pndl~v~~~G-~iy~TDs~ 79 (120)
......+++.++|+++++- ..+ |...|.++ ++...+..... ...+ .-...+.++++++| +++++-+.
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEET
T ss_pred CcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeC
Confidence 3556789999999888875 455 66667652 22222211000 0001 11235688888887 77776654
No 263
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=67.43 E-value=31 Score=25.62 Aligned_cols=60 Identities=7% Similarity=0.018 Sum_probs=37.8
Q ss_pred CCccceEECCC---CcEEEEECC-CCEEEEECCCCcEE-EEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKN---GALHVADAY-FGLYKVNVTTGQTE-QLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~---G~l~V~d~~-~gi~~vd~~~g~~~-~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++ ++++++-.. ..|...|..+++.. .+. .+ .-..++.++++ +|.+.+|-+.
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~------~~-h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL------FG-HKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC------CC-CSSCEEEEEEC-STTEEEEEES
T ss_pred CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee------cC-CCCceEEEEEC-CCCEEEEEeC
Confidence 45667899999 866665433 44666776666532 222 11 11345789999 8888887764
No 264
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=67.32 E-value=31 Score=27.34 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=41.9
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEecccccc------------CCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEI------------DGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~------------~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.+++.++++....+|...|.++++...-....... .......++.++++++|...+|-+.
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 3456789999998887766667888888776543222100000 0011223567899999988888764
No 265
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=67.30 E-value=45 Score=28.25 Aligned_cols=61 Identities=10% Similarity=-0.024 Sum_probs=41.7
Q ss_pred CccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....+++.++|+.+++.....+..++..+++...... .+ .-.....++++++|.+.++-+.
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~-----~~-~~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIH-----TG-HHSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEE-----CS-SSSCCCEEEECSSTTEEEEECS
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEc-----CC-CCCceEEEEEcCCCCEEEEEeC
Confidence 5668899999988777665668888987766443321 11 2234578899998887766654
No 266
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=67.18 E-value=32 Score=24.87 Aligned_cols=15 Identities=7% Similarity=0.284 Sum_probs=8.5
Q ss_pred ceEECCCCcEEEEEC
Q psy4774 16 GMKFDKNGALHVADA 30 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~ 30 (120)
.+++++++.+|++..
T Consensus 254 ~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 254 DLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEEESSSSCEEEEES
T ss_pred EEEecCCCEEEEEeC
Confidence 445555566666544
No 267
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=67.05 E-value=17 Score=25.91 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=38.2
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccc----cCC--CCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTE----IDG--AKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~----~~g--~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....++|.+++.++++....+|...+..+++...+...... ... ..-...+.++++|+|...++-+.
T Consensus 256 ~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 256 STINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT 329 (343)
T ss_dssp SCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred CcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence 345689999999877765555677777655442211110000 000 01123468999999877776553
No 268
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=65.51 E-value=30 Score=28.28 Aligned_cols=52 Identities=19% Similarity=0.424 Sum_probs=30.8
Q ss_pred CEEEEECCCCcEEEEeccccccCCCCCcCCCce----EEcCCC-----CEEEEeCCCCcccccceecceecCCceEEEEc
Q psy4774 33 GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSV----TVDSDG-----MVYWSDSSTKYKLYDGLFDGLTSGSGSFIKIG 103 (120)
Q Consensus 33 gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl----~v~~~G-----~iy~TDs~~~~~~~~~~~~~~~~~~G~l~~~d 103 (120)
.|+.+|.++|++..-+. ..+. -..+|+| .+|.++ .+|+.|-. |.|||+|
T Consensus 224 ~Lyv~d~~tG~li~~i~----~~~~-~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-----------------GnlWRfD 281 (570)
T 3hx6_A 224 ALLIIDMETGAITRKLE----VTGR-TGVPNGLSSPRLADNNSDGVADYAYAGDLQ-----------------GNLWRFD 281 (570)
T ss_dssp EEEEEETTTCCEEEEEE----ECCS-TTSCCCEEEEEEECTTSSSBCCEEEEEETT-----------------SEEEEEE
T ss_pred EEEEEECCCCceEEEEe----cCCC-CccCCccccceEEecCCCCceeEEEEEeCC-----------------CcEEEEE
Confidence 38888988887433222 1111 1234554 355443 48888875 8999998
Q ss_pred CCC
Q psy4774 104 PNT 106 (120)
Q Consensus 104 ~~~ 106 (120)
..+
T Consensus 282 l~~ 284 (570)
T 3hx6_A 282 LIA 284 (570)
T ss_dssp CSC
T ss_pred cCC
Confidence 665
No 269
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=65.01 E-value=33 Score=24.01 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=36.5
Q ss_pred CCccceEECCC--CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC--CCEEEEeCC
Q psy4774 12 GRPLGMKFDKN--GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~--G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~--G~iy~TDs~ 79 (120)
+.-..+++.++ ++++++-...| |...|.++++...+... .... .....+++.++ |.+.++-+.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~---~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH--AVHS---ASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEE--CCCS---SCEEEEEECCGGGCSEEEEEET
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeee--cCCC---cceEEEEeCCCCCCCEEEEecC
Confidence 34567888866 77776644444 55566666764444321 1111 23568888887 766666554
No 270
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=64.33 E-value=15 Score=27.67 Aligned_cols=22 Identities=32% Similarity=0.299 Sum_probs=15.5
Q ss_pred CcEEEEECCCCEEEEECCCCcE
Q psy4774 23 GALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 23 G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
|.+||......|+.+|.++|+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~ 32 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI 32 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcE
Confidence 5667776655688888777864
No 271
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=64.24 E-value=28 Score=26.35 Aligned_cols=61 Identities=15% Similarity=0.053 Sum_probs=36.4
Q ss_pred CCCccceEECCC-CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 11 CGRPLGMKFDKN-GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~-G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
......+++.++ ++++++-...| |...|.++++. .+.. ..+. ..+..++++++|...++-+
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~---~~~~---~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-VCAT---LPST---VAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE-EEEE---ECGG---GCEEEEEECTTSSCEEEEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc-eeec---cCCC---CceeEEEEcCCCCEEEEEc
Confidence 355778999998 67777544444 66678766633 2211 1111 2356788888876555444
No 272
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=64.01 E-value=15 Score=26.26 Aligned_cols=61 Identities=5% Similarity=-0.023 Sum_probs=34.3
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCc----EEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQ----TEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~----~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.++|+++++-...+ |...|.++++ ...+. +..-...+.++++++|.+.++-+.
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK-------RPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC-------SSCCSCEEEEEECTTSSEEEEEES
T ss_pred CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee-------cccCCCeEEEEEcCCCCEEEEEeC
Confidence 4566899999987666544444 5555665554 22221 111224568888888877766553
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=63.03 E-value=29 Score=25.12 Aligned_cols=56 Identities=9% Similarity=0.041 Sum_probs=30.4
Q ss_pred ccceEECCCCcEEEEECCCCEEEEECCCC-cEEEEeccccccCCCCCcCCCceEEcCCCCEEEE
Q psy4774 14 PLGMKFDKNGALHVADAYFGLYKVNVTTG-QTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWS 76 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g-~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~T 76 (120)
..++++++++.+|++....++++-+..+| ..+.+.. ... .....++++++|.+|+.
T Consensus 165 ~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~----~~~---~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR----TTS---RRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp EEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC----CSS---SCEEEEEECTTSCEEEE
T ss_pred eEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC----CCC---CccceeEECCCCCEEEE
Confidence 35688888888887765555777653223 3444421 111 12345666666655543
No 274
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=62.67 E-value=61 Score=26.36 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=41.9
Q ss_pred ccceEECCC-CcEEEEECCCCEEEEECCCCcEEEEecccccc----C----------C-------------CCCcC---C
Q psy4774 14 PLGMKFDKN-GALHVADAYFGLYKVNVTTGQTEQLISMDTEI----D----------G-------------AKPQI---P 62 (120)
Q Consensus 14 P~Gl~~d~~-G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~----~----------g-------------~~~~~---p 62 (120)
-+.+..++. ++++|+.-...|++|+. +|++.-+++..... . | ..|.+ -
T Consensus 357 iNsv~~d~~dd~~liSsR~~~I~~Id~-tG~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~~~~gQ 435 (571)
T 3elq_A 357 VNSIAYDAKDDSIILSSRHQGVVKIGR-DKQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFDFTYTQ 435 (571)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEET-TSCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCCCCSSC
T ss_pred ecceeEcCCCCEEEEECCccEEEEEcC-CCcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCccccCC
Confidence 467888875 46777654447999997 78877665431100 0 2 12222 4
Q ss_pred CceEEcCCCCEEEEeCCC
Q psy4774 63 NSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 63 ndl~v~~~G~iy~TDs~~ 80 (120)
++..+-++|+|.+=|...
T Consensus 436 H~a~~~~~g~i~vFDNg~ 453 (571)
T 3elq_A 436 HTAWISSKGTLTIFDNGD 453 (571)
T ss_dssp EEEEECTTSCEEEEECCT
T ss_pred cCeEEcCCCeEEEEeCCC
Confidence 677777889988888864
No 275
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=62.66 E-value=56 Score=25.93 Aligned_cols=61 Identities=5% Similarity=-0.165 Sum_probs=37.4
Q ss_pred CCccceEECC--CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDK--NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~--~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.+ +|.++++-...| |...|..+++...... .+. .....++++++|.+.++-+.
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~---~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE----GHM---SNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE----CCS---SCEEEEEECSSSSEEEEEET
T ss_pred CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc----CCC---CCEEEEEEcCCCCEEEEEeC
Confidence 4456788888 887777766555 6667877665433221 111 23457778888776666553
No 276
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=62.00 E-value=45 Score=24.61 Aligned_cols=60 Identities=8% Similarity=-0.010 Sum_probs=36.9
Q ss_pred CCccceEECC-CCcEEEEECCCC-EEEEECCCCc----EEEEeccccccCCCCCcCCCceEEcCCCC-EEEEeCC
Q psy4774 12 GRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQ----TEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~----~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TDs~ 79 (120)
+....+++.+ ++.++++....+ |...|..+++ +..+. .+. ..++.+++.++|. +++|-+.
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~---~~v~~i~~~p~~~~~l~tg~~ 298 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-----AHT---AEVNCLSFNPYSEFILATGSA 298 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-----CCS---SCEEEEEECSSCTTEEEEEET
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-----cCC---CCeEEEEeCCCCCCEEEEEeC
Confidence 4467899998 567877765555 6667776542 12221 111 2367888998875 7766554
No 277
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=61.96 E-value=38 Score=23.68 Aligned_cols=72 Identities=18% Similarity=0.141 Sum_probs=42.3
Q ss_pred CCcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccceecceecC
Q psy4774 22 NGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFDGLTSG 95 (120)
Q Consensus 22 ~G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~~~~~~~~ 95 (120)
++.|||.-.. ..++++|+++++++.+... .. +. .-..+++ -+|.||+.-.... ...
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----~~-~r-~~~~~~~-~~~~i~v~GG~~~-----------~~~ 265 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM----NM-CR-RNAGVCA-VNGLLYVVGGDDG-----------SCN 265 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC----SS-CC-BSCEEEE-ETTEEEEECCBCS-----------SSB
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC----CC-cc-ccCeEEE-ECCEEEEECCcCC-----------Ccc
Confidence 5789998432 3499999998888877531 11 11 1123333 3578887754211 112
Q ss_pred CceEEEEcCCC--ceEec
Q psy4774 96 SGSFIKIGPNT--QEVLQ 111 (120)
Q Consensus 96 ~G~l~~~d~~~--~~~l~ 111 (120)
...+++||+.+ .+.+.
T Consensus 266 ~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 266 LASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp CCCEEEEETTTTEEEECS
T ss_pred cccEEEEcCCCCeEEECC
Confidence 35688888887 55544
No 278
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=61.67 E-value=50 Score=26.15 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=39.0
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |...|..+++...... .+.. ....++++++|+..+|-+.
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~----~h~~---~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV----GHTK---DVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CCSS---CEEEEEECTTSSCEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe----CCCC---CEEEEEEeCCCCEEEEEeC
Confidence 3345789999998887765555 6666877775433221 1221 2467888888877776654
No 279
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=61.49 E-value=23 Score=28.87 Aligned_cols=23 Identities=13% Similarity=0.427 Sum_probs=19.0
Q ss_pred CCcEEEEECCCCEEEEECCCCcE
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQT 44 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~ 44 (120)
+|.|||+.....|+.+|.++|+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~ 92 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRL 92 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEECCCCce
Confidence 67899987656699999999974
No 280
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=61.31 E-value=29 Score=27.49 Aligned_cols=59 Identities=8% Similarity=-0.002 Sum_probs=37.9
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCC----------------CcCCCceEEcCCCC-EE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAK----------------PQIPNSVTVDSDGM-VY 74 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~----------------~~~pndl~v~~~G~-iy 74 (120)
.....+++.|||+.++.-....|+.++.++|+...+.. ++.. +.....++++|||. |+
T Consensus 110 ~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~-----~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la 184 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITF-----NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA 184 (719)
T ss_dssp SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCC-----CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE
T ss_pred cccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEec-----CCCcCCeEcccccceeeeecccCcccEEECCCCCEEE
Confidence 44667999999965544334558888887777665532 1211 12335899999995 44
Q ss_pred E
Q psy4774 75 W 75 (120)
Q Consensus 75 ~ 75 (120)
+
T Consensus 185 ~ 185 (719)
T 1z68_A 185 Y 185 (719)
T ss_dssp E
T ss_pred E
Confidence 4
No 281
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=60.39 E-value=45 Score=24.11 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=23.8
Q ss_pred ceEECCCCcEEEEECCCC-EEEEECCCCcEEEE
Q psy4774 16 GMKFDKNGALHVADAYFG-LYKVNVTTGQTEQL 47 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~ 47 (120)
.+++.++|..+++-...| |...|.++++...+
T Consensus 347 ~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 347 ECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp CEEECTTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEEEeccCCEEEEEEcCCCcceee
Confidence 389999998877766655 66678887876554
No 282
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=59.82 E-value=27 Score=24.60 Aligned_cols=31 Identities=13% Similarity=0.013 Sum_probs=21.1
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCc
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQ 43 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~ 43 (120)
.-..++|+++|+++++-...+ |...|.++++
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~ 46 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG 46 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTE
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC
Confidence 346789999998887765555 4444655554
No 283
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=58.85 E-value=26 Score=28.42 Aligned_cols=66 Identities=6% Similarity=-0.095 Sum_probs=37.7
Q ss_pred CCccceEECCC---CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKN---GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~---G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+....+++.++ |+++++-...| |...|..+++....... ......-.....++++++|...++-+.
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL--LKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB--SSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE--eccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 44668999999 87777655444 55566654421111000 001112234678999999987776554
No 284
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=58.83 E-value=48 Score=23.84 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=41.2
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |...|..+++...... . +-.....++++|+|...++-+.
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~----~---~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT----M---PCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----C---SSSCCCEEEECTTSSEEEEEST
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe----c---CCCCEEEEEECCCCCEEEEeeC
Confidence 3456899999998887766556 5555766665443322 1 2235678999999988887664
No 285
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=58.63 E-value=32 Score=27.48 Aligned_cols=57 Identities=9% Similarity=-0.037 Sum_probs=32.7
Q ss_pred cceEECCCCcEEEEECCC---CEEEEECCCCcE-EEEeccccccCCCCCcCCCceEEcCCC-CEEEEeCC
Q psy4774 15 LGMKFDKNGALHVADAYF---GLYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 15 ~Gl~~d~~G~l~V~d~~~---gi~~vd~~~g~~-~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs~ 79 (120)
.++++.+++.|+++-... .|+.++.++|+. ..+.. +......+.++++| .|+|+-++
T Consensus 339 ~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~--------~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 339 EWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL--------EVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC--------CSSEEEEEECCTTCSEEEEEEEC
T ss_pred EEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC--------CCceEEEEecCCCCCEEEEEEeC
Confidence 357776667777764333 377888756653 33321 12234566777776 46666444
No 286
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=58.33 E-value=33 Score=23.84 Aligned_cols=28 Identities=11% Similarity=-0.104 Sum_probs=19.3
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVT 40 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~ 40 (120)
.-..++|+++|+++++-...+ |...+.+
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~ 39 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVE 39 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBC
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecC
Confidence 345789999998888765555 4445654
No 287
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=58.25 E-value=27 Score=24.80 Aligned_cols=63 Identities=13% Similarity=0.099 Sum_probs=35.7
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECC-CCc-EEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVT-TGQ-TEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~-~g~-~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.-..+++.++|+++++-...+ |...|.. .++ .+.+... ..+. ...+.++++|+|.+.+|-+.
T Consensus 108 ~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~--~~h~---~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL--QEHS---QDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE--CCCS---SCEEEEEECSSSSEEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe--ccCC---CceEEEEECCCCCEEEEEcC
Confidence 3456899999998877655444 5555652 221 1222110 1111 23567888888887777654
No 288
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=58.25 E-value=50 Score=23.93 Aligned_cols=61 Identities=5% Similarity=-0.067 Sum_probs=39.1
Q ss_pred CCCccceEECCCCcEEEEECCC-CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeC
Q psy4774 11 CGRPLGMKFDKNGALHVADAYF-GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~~G~l~V~d~~~-gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs 78 (120)
.+...++++.++|+++++-... .|...|..+++...... .. -.....+++.++| .++++-+
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~----~~---~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT----NH---NAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC----CC---SSCCCEEEECTTSTTEEEEEC
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec----CC---cceEEEEEECCCCCCEEEEec
Confidence 3556789999999877765444 47777887665443321 11 1235788888865 6777654
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=58.02 E-value=64 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=22.9
Q ss_pred ccceEEC-CCCc----EEEEECCCCEEEEECCCCcEE
Q psy4774 14 PLGMKFD-KNGA----LHVADAYFGLYKVNVTTGQTE 45 (120)
Q Consensus 14 P~Gl~~d-~~G~----l~V~d~~~gi~~vd~~~g~~~ 45 (120)
..|+++. .+|. ||+......|+.+|.++|++.
T Consensus 108 ~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~ 144 (599)
T 1w6s_A 108 NRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETV 144 (599)
T ss_dssp CCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEE
Confidence 3567773 2456 998865556999999999853
No 290
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=58.01 E-value=29 Score=26.48 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=31.1
Q ss_pred CCcEEEEECCCCEEE-EECCCCcE-EEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 22 NGALHVADAYFGLYK-VNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~-vd~~~g~~-~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
++.++++-...+.++ .|.++|+. .++. .+.........++|+|+|.+.++-+
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~-----g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMH-----IDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEE-----CCC---CCCEEEEEEETTEEEEEEC
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEc-----CCCcceeeeEEEEECCCCCEEEEec
Confidence 567888766666444 58888874 3332 1222233455678999988776533
No 291
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=55.96 E-value=26 Score=27.52 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=37.4
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCcE-EEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQT-EQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~-~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
...+++.|++..+++-...+ |...|..+++. ..+.. + ....+.|+++|+|...+|-+.
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-----H---~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-----R---ETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-----C---SSCEEEEECCSSCCBCEEEET
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-----C---CCceEEEEeCCCCCeEEEEEC
Confidence 46799999998888755544 65567766653 33321 1 124578888888877666553
No 292
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=55.04 E-value=58 Score=23.66 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=33.8
Q ss_pred ECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 19 FDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 19 ~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.+++.++++-...+ |...|.++++...... .. ..-...+.++++++|...+|-+.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~-~h~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIE----NS-PRHGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEE----CC-GGGCCEEEEEECTTSCEEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc----cC-CCCCceEEEEECCCCCEEEEEcC
Confidence 556777776655544 7777887776543332 10 01124578889988887776554
No 293
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=54.83 E-value=60 Score=26.28 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=36.9
Q ss_pred CCccceEECCC--CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC--CCEEEEeCC
Q psy4774 12 GRPLGMKFDKN--GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~--G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~--G~iy~TDs~ 79 (120)
+.-..+++.++ |+++++-...| |...|.++++...+... ..+. .....++++++ |.++++-+.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~--~~h~---~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH--AVHS---ASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE--CCCS---SCEEEEEECCGGGCSEEEEEET
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc--cCCC---CCeEEEEECCCCCCCEEEEEeC
Confidence 34567899877 87777655545 55566666654444321 1111 23567888887 766666554
No 294
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.98 E-value=36 Score=27.85 Aligned_cols=64 Identities=19% Similarity=0.177 Sum_probs=41.5
Q ss_pred CCccceEECCC--CcEEEEECCCCEEEEECCCCcEEEEeccccccCCC--CCcCCCceEEcCC--CCEEEEeC
Q psy4774 12 GRPLGMKFDKN--GALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGA--KPQIPNSVTVDSD--GMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~--G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~--~~~~pndl~v~~~--G~iy~TDs 78 (120)
++-.+|++++. +.||+.-...+|+|-+..+...+.+.. ..... .......|++++. +.||+.-.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~---~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~ 92 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLD---HFQMDEYSYYGVESIATDPVDPNRVYIVAG 92 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCT---TCCGGGGGGGCEEEEEECSSSTTCEEEEEC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcC---ccCcccccCCCcceEEeCCCCCCEEEEEec
Confidence 47889999987 588886555679999865445566532 11100 1233568899973 58888753
No 295
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=51.90 E-value=60 Score=22.92 Aligned_cols=65 Identities=11% Similarity=-0.053 Sum_probs=32.1
Q ss_pred CCccceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcC--CCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDS--DGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~--~G~iy~TDs~ 79 (120)
.....+++.+++.|..+.....|...+..+++.+.+.. ...+......+.+++.+ +|.+.+|-+.
T Consensus 251 ~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~---~~~~h~~~~v~~v~~~~~~~~~~las~s~ 317 (330)
T 2hes_X 251 RQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAK---RALCHGVYEINVVKWLELNGKTILATGGD 317 (330)
T ss_dssp SCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEE---ESCTTTTSCEEEEEEC-----CCEEEEET
T ss_pred cceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEec---cccccccceEEEEEEecCCCceEEEEecC
Confidence 34567888876655444433334445555565444432 11121211356788887 5777776654
No 296
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=51.45 E-value=38 Score=24.66 Aligned_cols=33 Identities=9% Similarity=0.086 Sum_probs=23.9
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQT 44 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~ 44 (120)
+....+++.++++++++-...| |...|..+++.
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248 (437)
T ss_dssp CCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE
Confidence 5667899999998777655555 77778776654
No 297
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=50.90 E-value=26 Score=28.05 Aligned_cols=55 Identities=15% Similarity=0.220 Sum_probs=34.7
Q ss_pred cceEECCCCcEEE--EEC-CC---CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCC-EEEEe
Q psy4774 15 LGMKFDKNGALHV--ADA-YF---GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWSD 77 (120)
Q Consensus 15 ~Gl~~d~~G~l~V--~d~-~~---gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~TD 77 (120)
.++++.|||+.++ .+. +. .|+.+|.++|+...... .+.. ..++++++||. ||++-
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-----~~~~---~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-----ERVK---FSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-----EEEC---SCCEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-----cCcc---cceEEEEeCCCEEEEEE
Confidence 4789999997544 232 22 48889998887654321 1111 35788998884 66653
No 298
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=49.56 E-value=78 Score=25.84 Aligned_cols=54 Identities=9% Similarity=-0.008 Sum_probs=33.9
Q ss_pred ccceEECCCCcEEEEECCCC-EEEEECCCCc--------EEEEeccccccCCCCCcCCCceEEcCCC
Q psy4774 14 PLGMKFDKNGALHVADAYFG-LYKVNVTTGQ--------TEQLISMDTEIDGAKPQIPNSVTVDSDG 71 (120)
Q Consensus 14 P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~--------~~~~~~~~~~~~g~~~~~pndl~v~~~G 71 (120)
-..++|.|+|+++++-...| |...+.++++ +..+-. ...| -......++++|+|
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~---~~~g-h~~~V~sVawSPdg 194 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL---SDAG-SKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC---SCTT-CCCCEEEEEEETTE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec---cccc-ccccEEEEEEcCCc
Confidence 44799999997766655455 5556776664 233321 1122 23567789999998
No 299
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=49.44 E-value=50 Score=25.08 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=42.4
Q ss_pred CCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCC---CCcCCCceEEcCCCCEEEEeCCCCcccc--ccee--cce-
Q psy4774 22 NGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGA---KPQIPNSVTVDSDGMVYWSDSSTKYKLY--DGLF--DGL- 92 (120)
Q Consensus 22 ~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~---~~~~pndl~v~~~G~iy~TDs~~~~~~~--~~~~--~~~- 92 (120)
+|+||..|-..| |+++. ++++-+.+=. ..-+|. .|+ .-++.-.|+.+|+--..--|... .+.. .++
T Consensus 104 ngkLyt~DDRTGiVyei~--~~~~iPwvIL-~dGdG~~~kGfK--~EWaTVKd~~LyVGs~GKEwtt~~G~~~n~n~~wV 178 (331)
T 1s1d_A 104 NGKLYSVDDRTGVVYQIE--GSKAVPWVIL-SDGDGTVEKGFK--AEWLAVKDERLYVGGLGKEWTTTTGDVVNENPEWV 178 (331)
T ss_dssp TTEEEEEETTTCEEEEEE--TTEEEEEEEC-EETTTTEEEECC--CCEEEEETTEEEEECCCSCEECTTCCEEECGGGEE
T ss_pred CCEEeeeeCCCceEEEEe--CCcEEEEEEE-ecCCCCcCcccc--eeeEEEECCEEEEeecCceeEcCCCcEecCCCeEE
Confidence 478898888877 77775 3444333211 122332 343 56677778888876444322111 1111 111
Q ss_pred --ecCCceEEEEcCCC
Q psy4774 93 --TSGSGSFIKIGPNT 106 (120)
Q Consensus 93 --~~~~G~l~~~d~~~ 106 (120)
=.+.|.|-+.|+..
T Consensus 179 k~I~~~G~V~~~dW~~ 194 (331)
T 1s1d_A 179 KVVGYKGSVDHENWVS 194 (331)
T ss_dssp EEECTTCCEEEEECHH
T ss_pred EEECCCCcEEEechHH
Confidence 24677777777655
No 300
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=48.80 E-value=62 Score=22.19 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=22.8
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQT 44 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~ 44 (120)
+....+++.++|+++++-...+ |...|..+++.
T Consensus 216 ~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 216 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 3456789999998887755555 66667766543
No 301
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=45.99 E-value=87 Score=24.91 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=22.0
Q ss_pred cceEECCCCcE-EEEEC-C---CCEEEEECCCCcEEEEec
Q psy4774 15 LGMKFDKNGAL-HVADA-Y---FGLYKVNVTTGQTEQLIS 49 (120)
Q Consensus 15 ~Gl~~d~~G~l-~V~d~-~---~gi~~vd~~~g~~~~~~~ 49 (120)
.++++.++|+. +++.. . ..|+.++..+++...+..
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 47899999954 33322 2 247777766677666653
No 302
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=43.49 E-value=40 Score=27.22 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=27.4
Q ss_pred ceEECCCCcEEEEECCC---CEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC-CEEEEeCC
Q psy4774 16 GMKFDKNGALHVADAYF---GLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG-MVYWSDSS 79 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~~~---gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G-~iy~TDs~ 79 (120)
++++. ++.|+++.... .|+.++.+++....+. .++ ......+.++++| .|+|+=++
T Consensus 368 ~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-----~~~--~~~v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 368 SVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS-----LPG--IGSASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp EEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB-----CSS--SCEEEEEECCBTCSCEEEEEEE
T ss_pred EEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc-----CCC--CeEEEEeecCCCCCEEEEEEcC
Confidence 45555 45666653322 3667776433333331 111 1123566677776 46665443
No 303
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=42.85 E-value=66 Score=26.27 Aligned_cols=61 Identities=7% Similarity=-0.097 Sum_probs=37.1
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCC--CcCCCceEEcCCCCEEEEeCC
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAK--PQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~--~~~pndl~v~~~G~iy~TDs~ 79 (120)
.....+++.|+|..+++-...| |...+.+ +.+..+ . +..+ -...+.++++|||...++-+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-~~l~~l-----~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-KMLTNL-----D-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETT-EEEEEC-----C-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCC-ceeeec-----c-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 4466899999998777655555 5555643 322222 1 1111 123569999999976666554
No 304
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.30 E-value=24 Score=26.59 Aligned_cols=9 Identities=33% Similarity=0.696 Sum_probs=4.8
Q ss_pred EEEEECCCC
Q psy4774 34 LYKVNVTTG 42 (120)
Q Consensus 34 i~~vd~~~g 42 (120)
|+.++.++|
T Consensus 69 l~a~~~~~G 77 (339)
T 2be1_A 69 IYYFNAHQG 77 (339)
T ss_dssp EEEEETTTE
T ss_pred EEEEECCCC
Confidence 555555444
No 305
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=41.07 E-value=1e+02 Score=22.49 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=30.1
Q ss_pred ECCCCcEEEEECC-CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 19 FDKNGALHVADAY-FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 19 ~d~~G~l~V~d~~-~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
+.++++++++-.. ..|...|..+++...... + .-.....++++++|...++-+.
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~------~-~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS------G-HTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEEC------C-CSSCEEEEEEETTTTEEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEec------C-CCCCEEEEEEcCCCCEEEEEeC
Confidence 3455666655444 347777877665433221 1 1123467888888776666554
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=40.38 E-value=89 Score=21.59 Aligned_cols=67 Identities=19% Similarity=0.090 Sum_probs=39.7
Q ss_pred CCcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccceecceecC
Q psy4774 22 NGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFDGLTSG 95 (120)
Q Consensus 22 ~G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~~~~~~~~ 95 (120)
+++|||.... ..++++|+++.+++.+... .. +.. -..+++- ++.||+.-.... ...
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~----p~-~r~-~~~~~~~-~~~i~v~GG~~~-----------~~~ 267 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM----TT-PRC-YVGATVL-RGRLYAIAGYDG-----------NSL 267 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC----SS-CCB-SCEEEEE-TTEEEEECCBCS-----------SSB
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC----CC-ccc-ceeEEEE-CCEEEEEcCcCC-----------Ccc
Confidence 5789998532 3489999998888877531 11 111 1233333 577888754211 012
Q ss_pred CceEEEEcCCC
Q psy4774 96 SGSFIKIGPNT 106 (120)
Q Consensus 96 ~G~l~~~d~~~ 106 (120)
...+++||+.+
T Consensus 268 ~~~v~~yd~~~ 278 (301)
T 2vpj_A 268 LSSIECYDPII 278 (301)
T ss_dssp EEEEEEEETTT
T ss_pred cccEEEEcCCC
Confidence 35788888876
No 307
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=40.28 E-value=1.6e+02 Score=24.55 Aligned_cols=67 Identities=3% Similarity=-0.063 Sum_probs=40.4
Q ss_pred CCccceEECCCC-cEEEEECCCCEEEEECCCCcEEEEeccccccCCCC------------CcCCCceEEcCCCCEEEEeC
Q psy4774 12 GRPLGMKFDKNG-ALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAK------------PQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 12 g~P~Gl~~d~~G-~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~------------~~~pndl~v~~~G~iy~TDs 78 (120)
+....+++.|++ .++++-...+.+..|.++++....... ....+.+ -...+.++++++|...+|-+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIY-ELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECC-CBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEec-ccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 556789999964 555554555644778877764333221 0000111 13467899999999888876
Q ss_pred C
Q psy4774 79 S 79 (120)
Q Consensus 79 ~ 79 (120)
.
T Consensus 231 ~ 231 (902)
T 2oaj_A 231 E 231 (902)
T ss_dssp T
T ss_pred C
Confidence 4
No 308
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=39.47 E-value=56 Score=27.07 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=39.6
Q ss_pred cCCCCccceEECCCCcEEEEECC--CCEEEEECCC------CcE-----EEEeccccccCCCCCcCCCceEEcCCCCEEE
Q psy4774 9 QQCGRPLGMKFDKNGALHVADAY--FGLYKVNVTT------GQT-----EQLISMDTEIDGAKPQIPNSVTVDSDGMVYW 75 (120)
Q Consensus 9 ~~~g~P~Gl~~d~~G~l~V~d~~--~gi~~vd~~~------g~~-----~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~ 75 (120)
+....|.|+.++|||+-+++... ..+..+|.+. +++ .+++. .+ .-..|--.+||++|+.|.
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae----~e--~GlGPlHt~Fd~~G~aYT 393 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE----PE--LGLGPLHTTFDGRGNAYT 393 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC----CB--CCSCEEEEEECSSSEEEE
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee----cc--CCCcccEEEECCCCceEe
Confidence 45578999999999977666554 3366666431 111 11221 11 112466899999999997
Q ss_pred EeC
Q psy4774 76 SDS 78 (120)
Q Consensus 76 TDs 78 (120)
|=.
T Consensus 394 tlf 396 (638)
T 3sbq_A 394 TLF 396 (638)
T ss_dssp EET
T ss_pred eee
Confidence 754
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=38.21 E-value=1e+02 Score=21.60 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=30.2
Q ss_pred CCCcEEEEECC-------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeC
Q psy4774 21 KNGALHVADAY-------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDS 78 (120)
Q Consensus 21 ~~G~l~V~d~~-------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs 78 (120)
-+++|||.-.. ..++++|+++.+++.+... . .+.. -...++. ++.||+.-.
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~----p-~~r~-~~~~~~~-~~~iyv~GG 204 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM----Q-TARS-LFGATVH-DGRIIVAAG 204 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC----S-SCCB-SCEEEEE-TTEEEEEEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC----C-Cchh-ceEEEEE-CCEEEEEec
Confidence 46789998532 2499999988888877531 1 1111 1223332 568887644
No 310
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=38.10 E-value=86 Score=25.81 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=40.9
Q ss_pred CCCCccceEECCCC--cEEEEECCCCEEEEECCCCcEEEEeccc-ccc-CC--CCCcCCCceEEcCC--CCEEEEe
Q psy4774 10 QCGRPLGMKFDKNG--ALHVADAYFGLYKVNVTTGQTEQLISMD-TEI-DG--AKPQIPNSVTVDSD--GMVYWSD 77 (120)
Q Consensus 10 ~~g~P~Gl~~d~~G--~l~V~d~~~gi~~vd~~~g~~~~~~~~~-~~~-~g--~~~~~pndl~v~~~--G~iy~TD 77 (120)
..++-.+|+++|.+ .+||+-...+|++-+..+...+.+.... ... .. ........|++++. +.+|+.-
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 35678899999975 6788765677988875433456554210 000 10 12334567888873 5788743
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=36.75 E-value=1e+02 Score=21.33 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=39.0
Q ss_pred CCcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccceecceecC
Q psy4774 22 NGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFDGLTSG 95 (120)
Q Consensus 22 ~G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~~~~~~~~ 95 (120)
+++|||.... ..++++|+++.+++.+... +. +.. -..+++- ++.||+.-.... ...
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----p~-~r~-~~~~~~~-~~~i~v~GG~~~-----------~~~ 261 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM----PW-KGV-TVKCAAV-GSIVYVLAGFQG-----------VGR 261 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC----SC-CBS-CCEEEEE-TTEEEEEECBCS-----------SSB
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC----CC-Ccc-ceeEEEE-CCEEEEEeCcCC-----------Cee
Confidence 6789998321 3489999998888877431 11 111 1233333 578888765321 012
Q ss_pred CceEEEEcCCC
Q psy4774 96 SGSFIKIGPNT 106 (120)
Q Consensus 96 ~G~l~~~d~~~ 106 (120)
...++.||+.+
T Consensus 262 ~~~~~~yd~~~ 272 (306)
T 3ii7_A 262 LGHILEYNTET 272 (306)
T ss_dssp CCEEEEEETTT
T ss_pred eeeEEEEcCCC
Confidence 34677777766
No 312
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=36.02 E-value=1.4e+02 Score=24.86 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=33.6
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
+....++|+++|+++++-...| |...+.++++..... . .. .....|++.+ |...+|-
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~----~-~~---~~V~~l~fsp-g~~L~S~ 75 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL----E-DR---SAIKEMRFVK-GIYLVVI 75 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC----S-SC---CCEEEEEEET-TTEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc----C-CC---CCEEEEEEcC-CCEEEEE
Confidence 4456899999999888766666 555566544432221 1 11 1346777777 6644443
No 313
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=35.59 E-value=1e+02 Score=20.79 Aligned_cols=63 Identities=6% Similarity=0.004 Sum_probs=37.1
Q ss_pred CCccceEECCC---CcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCC----CEEEEeCC
Q psy4774 12 GRPLGMKFDKN---GALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDG----MVYWSDSS 79 (120)
Q Consensus 12 g~P~Gl~~d~~---G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G----~iy~TDs~ 79 (120)
.....+++.++ +.++++-...+ ++..+...++...+.. ..+. -...+.++++++| ++.+|-+.
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~h-~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK----LPGH-KSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE----CCCC-CSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee----cCCC-CcceeEEEECCCCCCcceEEEEEcC
Confidence 45567888886 77766655544 4444455566544432 1221 1235788999987 66666554
No 314
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=35.33 E-value=1.1e+02 Score=21.34 Aligned_cols=68 Identities=10% Similarity=0.105 Sum_probs=36.4
Q ss_pred CCCccceEECC-CCcEEEEECCCC-EEEEECCCCcEEEEecc------ccccCCCCCcCCCceEEcC-CCCEEEEeC
Q psy4774 11 CGRPLGMKFDK-NGALHVADAYFG-LYKVNVTTGQTEQLISM------DTEIDGAKPQIPNSVTVDS-DGMVYWSDS 78 (120)
Q Consensus 11 ~g~P~Gl~~d~-~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~------~~~~~g~~~~~pndl~v~~-~G~iy~TDs 78 (120)
.+.-..+++.+ +|+++++-...| |...+.++++....... ........-.....+++.+ ++++++|-+
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 35567899999 898877655545 66667665542211100 0000001122356788888 555555544
No 315
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=35.32 E-value=1.7e+02 Score=23.34 Aligned_cols=34 Identities=9% Similarity=0.171 Sum_probs=20.7
Q ss_pred cceEECCCCcEE-EEE-CC---CCEEEEECCCC--cEEEEe
Q psy4774 15 LGMKFDKNGALH-VAD-AY---FGLYKVNVTTG--QTEQLI 48 (120)
Q Consensus 15 ~Gl~~d~~G~l~-V~d-~~---~gi~~vd~~~g--~~~~~~ 48 (120)
.++++.++|+.+ +.. .. ..|+.++.+++ +...+.
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 467899999644 332 21 24888886555 455554
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=34.55 E-value=1.2e+02 Score=21.23 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=40.1
Q ss_pred CCcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCCCcccccceecceecC
Q psy4774 22 NGALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSSTKYKLYDGLFDGLTSG 95 (120)
Q Consensus 22 ~G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~~~~~~~~~~~~~~~~ 95 (120)
++.|||.... ..++++|+++.+++.+... .. +. .-..+++- ++.||+.-.... ...
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~----p~-~r-~~~~~~~~-~~~i~v~GG~~~-----------~~~ 276 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM----KH-RR-SALGITVH-QGRIYVLGGYDG-----------HTF 276 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC----SS-CC-BSCEEEEE-TTEEEEECCBCS-----------SCB
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC----CC-Cc-cceEEEEE-CCEEEEEcCcCC-----------Ccc
Confidence 6789998532 3499999998888777431 11 11 12233333 578888654211 123
Q ss_pred CceEEEEcCCC
Q psy4774 96 SGSFIKIGPNT 106 (120)
Q Consensus 96 ~G~l~~~d~~~ 106 (120)
...++.||+.+
T Consensus 277 ~~~v~~yd~~~ 287 (308)
T 1zgk_A 277 LDSVECYDPDT 287 (308)
T ss_dssp CCEEEEEETTT
T ss_pred cceEEEEcCCC
Confidence 45788999887
No 317
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=34.10 E-value=1.7e+02 Score=23.11 Aligned_cols=57 Identities=9% Similarity=-0.032 Sum_probs=32.8
Q ss_pred cceEECCCCcEEE-EECCC-------------CEEEEECCCCcE--EEEeccccccCCCCCcCCCceEEcCCCC-EEEE
Q psy4774 15 LGMKFDKNGALHV-ADAYF-------------GLYKVNVTTGQT--EQLISMDTEIDGAKPQIPNSVTVDSDGM-VYWS 76 (120)
Q Consensus 15 ~Gl~~d~~G~l~V-~d~~~-------------gi~~vd~~~g~~--~~~~~~~~~~~g~~~~~pndl~v~~~G~-iy~T 76 (120)
.++++.+||+.++ +.... .|++.+..+++. ..+.. ..+.+ .....+.+++||. |+++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~----~~~~~-~~~~~~~~SpDG~~l~~~ 244 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE----RTGDP-TTFLQSDLSRDGKYLFVY 244 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC----CCCCT-TCEEEEEECTTSCCEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe----cCCCC-EEEEEEEECCCCCEEEEE
Confidence 6899999996544 33322 288888877652 23332 11111 1234778888884 4443
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.93 E-value=1.1e+02 Score=24.38 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=30.8
Q ss_pred CCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCCC
Q psy4774 21 KNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSST 80 (120)
Q Consensus 21 ~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~~ 80 (120)
..|.+|+++....|+.+|.++|+.---.. ... .. ..+-++...+|.+||.-...
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~----~~~-g~-~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQ----TGS-GI-VSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEE----CSS-CC-CSCCEEEEETTEEEEEEEEC
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEec----CCC-Cc-ccCceEEEECCEEEEEEEcc
Confidence 35666776543448888888887422121 111 11 12336666789999887754
No 319
>2faf_A Phosphoenolpyruvate carboxykinase; pepck, phosphoryl transfer, lyase; HET: 20S EPE 1PE; 1.70A {Gallus gallus} PDB: 2fah_A* 2qzy_A*
Probab=31.71 E-value=34 Score=28.13 Aligned_cols=59 Identities=31% Similarity=0.461 Sum_probs=33.9
Q ss_pred eEECCCCcEEEEECCCCEEEEECCCCcEE-EEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 17 MKFDKNGALHVADAYFGLYKVNVTTGQTE-QLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 17 l~~d~~G~l~V~d~~~gi~~vd~~~g~~~-~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
|.++.||+||..+..+|++-+-|.+...+ +.+- .... .. ..-..|++.+||.+|+-...
T Consensus 301 m~~~~dG~l~AiNPE~GfFGvapGt~~~tnP~am--~tl~-~n-~IFTNVa~t~dG~v~WeG~~ 360 (608)
T 2faf_A 301 MKFDDEGRLRAINPERGFFGVAPGTSSRTNPNAM--ATIA-RN-TIFTNVGLRSDGGVYWDGLD 360 (608)
T ss_dssp EEECTTSBEEEECCCSEEEEECTTCCTTTCHHHH--HHTS-BS-CEEESCEEETTSCEECTTCC
T ss_pred eEECCCCcEEEecCCCCeeEecCCCCCCcCHHHH--HHhc-cC-ceeeeeEEcCCCceecCCCC
Confidence 66777888887777778887766433211 1100 0010 01 12347888899999986554
No 320
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=31.60 E-value=1.9e+02 Score=23.20 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=22.0
Q ss_pred ccceEECCCCc-EEEEE-CC----CCEEEEECCCC--c-EEEEe
Q psy4774 14 PLGMKFDKNGA-LHVAD-AY----FGLYKVNVTTG--Q-TEQLI 48 (120)
Q Consensus 14 P~Gl~~d~~G~-l~V~d-~~----~gi~~vd~~~g--~-~~~~~ 48 (120)
-.++.+.++|+ |+++. .. ..|+.+|.+++ + ...+.
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 34788999995 43332 21 24888887666 5 55554
No 321
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=31.23 E-value=1.3e+02 Score=20.94 Aligned_cols=51 Identities=10% Similarity=0.017 Sum_probs=29.9
Q ss_pred CCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 22 NGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 22 ~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.++++.....|..+|..+++...... .+. .....++++++|.+.+|-+.
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~~~~----~~~---~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQITMLK----GHY---KTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEEEEC----CCS---SCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEecCCEEEEEECcCCcceeeec----cCC---CeEEEEEEcCCCCEEEEECC
Confidence 3455544444457777876665433321 111 23568999999987777664
No 322
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=31.13 E-value=1.3e+02 Score=26.32 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=21.6
Q ss_pred CCcEEEEECCCC--EEEEECCCCcEEEEec
Q psy4774 22 NGALHVADAYFG--LYKVNVTTGQTEQLIS 49 (120)
Q Consensus 22 ~G~l~V~d~~~g--i~~vd~~~g~~~~~~~ 49 (120)
.+.++|+|...+ +++++++.++.+.++.
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~ 965 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEGNFEEIAR 965 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEEhhheEEEEEEEcCCCeEEEEEe
Confidence 347888999877 6667887788888875
No 323
>1nr3_A MTH0916, DNA-binding protein TFX; northeast structural genomics consortium, reduced- dimensionality PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.236.1.1
Probab=30.89 E-value=41 Score=20.98 Aligned_cols=22 Identities=18% Similarity=0.104 Sum_probs=18.3
Q ss_pred CCCCCcCCCceEEcCCCCEEEEe
Q psy4774 55 DGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 55 ~g~~~~~pndl~v~~~G~iy~TD 77 (120)
.+.+.+.+.-|.+..+|.||| |
T Consensus 98 ~~~~~~~~~~i~v~~~g~~~~-~ 119 (122)
T 1nr3_A 98 VHRVVKSDFEIGVTRDGEIIV-D 119 (122)
T ss_dssp CCCCSSSCEEEEESSSSSEEE-E
T ss_pred cCCcccccEEEEEccCCcEEE-e
Confidence 455677788999999999999 5
No 324
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=30.31 E-value=1.7e+02 Score=23.27 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=32.3
Q ss_pred eEECCC-CcEEEEECC------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 17 MKFDKN-GALHVADAY------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 17 l~~d~~-G~l~V~d~~------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
-.+|++ |+||..... ..++++++ +|+....+. +.-....+.+|+++.++ .+.|-+..
T Consensus 224 Pk~Dp~TGel~~f~y~~~~~p~~~~~~~~~-~G~~~~~~~----i~~~~p~~~HDFaiTen-yvVf~~~P 287 (529)
T 3npe_A 224 PKLDPATGELHALSYDVIKRPYLKYFYFRP-DGTKSDDVE----IPLEQPTMIHDFAITEN-LVVVPDHQ 287 (529)
T ss_dssp CEECTTTCCEEEEECCSSSSCCCEEEEECT-TCCBCCCEE----CCCSSCBCCCCCEECSS-EEEEEECS
T ss_pred CcCCCCCCcEEEEEeecCCCCcEEEEEECC-CCCEEEEEE----EeCCCCceEeeEEecCC-eEEEEeCC
Confidence 456776 777765432 12666776 465444432 22223456789998886 44455554
No 325
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=29.51 E-value=91 Score=25.79 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=39.4
Q ss_pred CCCccceEECCC--CcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCC--CCEEEE
Q psy4774 11 CGRPLGMKFDKN--GALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSD--GMVYWS 76 (120)
Q Consensus 11 ~g~P~Gl~~d~~--G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~--G~iy~T 76 (120)
.++-.+|++++. +.+|+.....+|+|-+..+...+.+.... ..+.........|++++. +.+|+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~-~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFI-EAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTC-CGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCC-CcccccCCceeEEEECCCCCCEEEEE
Confidence 467889999986 57888766678999876444566553210 000001223567888873 467765
No 326
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=28.68 E-value=94 Score=18.39 Aligned_cols=26 Identities=12% Similarity=0.040 Sum_probs=14.9
Q ss_pred CCccc--eEECCCCcEEEEECCCCEEEE
Q psy4774 12 GRPLG--MKFDKNGALHVADAYFGLYKV 37 (120)
Q Consensus 12 g~P~G--l~~d~~G~l~V~d~~~gi~~v 37 (120)
..|.| .+++++|++|..+...+....
T Consensus 12 ~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W 39 (88)
T 1tk7_A 12 PLPDGWEKKIQSDNRVYFVNHKNRTTQW 39 (88)
T ss_dssp SSSSSCCEEEETTTEEEEEETTTTEEEE
T ss_pred CCCCCcEEEECCCCCEEEEECCCCCeEe
Confidence 44565 346667777766655444443
No 327
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.08 E-value=29 Score=20.58 Aligned_cols=13 Identities=23% Similarity=0.404 Sum_probs=9.4
Q ss_pred cCCceEEEEcCCC
Q psy4774 94 SGSGSFIKIGPNT 106 (120)
Q Consensus 94 ~~~G~l~~~d~~~ 106 (120)
.+.||+|.||+.+
T Consensus 27 T~dGR~fyyN~~T 39 (73)
T 2dk7_A 27 TGDERVFFYNPTT 39 (73)
T ss_dssp ESSSCEEEEETTT
T ss_pred CCCCCEEEecCcc
Confidence 4667777777776
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=25.90 E-value=1.7e+02 Score=20.40 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=30.1
Q ss_pred CCCcEEEEECC-------CCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 21 KNGALHVADAY-------FGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 21 ~~G~l~V~d~~-------~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
.++.|||.-.. ..++++|+++.+++.+... . .+. .....++ -++.||+.-
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~----p-~~r-~~~~~~~-~~~~iyv~G 213 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM----K-TPR-SMFGVAI-HKGKIVIAG 213 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC----S-SCC-BSCEEEE-ETTEEEEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC----C-CCc-ccceEEE-ECCEEEEEc
Confidence 46789997431 2499999998888877531 1 111 1123333 256888764
No 329
>1y08_A Hypothetical protein SPY0861; cysteine proteinase, papain-like fold with major insertions, hydrolase; 1.93A {Streptococcus pyogenes} SCOP: d.3.1.12 PDB: 2avw_A 2au1_A
Probab=25.02 E-value=40 Score=25.55 Aligned_cols=17 Identities=35% Similarity=0.644 Sum_probs=14.4
Q ss_pred ceEEcCCCC---EEEEeCCC
Q psy4774 64 SVTVDSDGM---VYWSDSST 80 (120)
Q Consensus 64 dl~v~~~G~---iy~TDs~~ 80 (120)
|..+|.+|+ ||+|||-.
T Consensus 252 GAE~De~Gnl~aIYvTDSDD 271 (323)
T 1y08_A 252 GADFDSNGNLKAIYVTDSDS 271 (323)
T ss_dssp EEEECTTSCEEEEEEECTTS
T ss_pred eeEecCCCCEEEEEEecCCC
Confidence 677899996 99999974
No 330
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=24.95 E-value=41 Score=19.71 Aligned_cols=13 Identities=0% Similarity=0.026 Sum_probs=10.1
Q ss_pred eEEEEcCCC--ceEe
Q psy4774 98 SFIKIGPNT--QEVL 110 (120)
Q Consensus 98 ~l~~~d~~~--~~~l 110 (120)
.+|+||+++ +++.
T Consensus 41 KIykyde~tNeI~Lk 55 (72)
T 3kvp_A 41 KIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCeEEEE
Confidence 789999998 5443
No 331
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=24.53 E-value=1.3e+02 Score=22.44 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=21.8
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCc
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQ 43 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~ 43 (120)
.....+++.++|+.+++-...| |..+|.+ ++
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 4677899999997666544444 7777875 44
No 332
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=23.90 E-value=2.1e+02 Score=22.61 Aligned_cols=68 Identities=19% Similarity=0.327 Sum_probs=41.7
Q ss_pred CccceEECCCCcEEEEECC--CC----EEEEECCCCcEEEEecccc-ccCCCCCcCCC--ceEEcCCC--CEEEEeCCC
Q psy4774 13 RPLGMKFDKNGALHVADAY--FG----LYKVNVTTGQTEQLISMDT-EIDGAKPQIPN--SVTVDSDG--MVYWSDSST 80 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~--~g----i~~vd~~~g~~~~~~~~~~-~~~g~~~~~pn--dl~v~~~G--~iy~TDs~~ 80 (120)
....+..+.+|+||.|+.. .+ |+|..-.+.+.+++++..- ...+.-+.+-. .+..|.+| .|+|++.+.
T Consensus 190 f~~~m~a~~~G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~isv~GD~~gNa~I~~~~n~s 268 (453)
T 4ftd_A 190 YDYNMGALINGHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDNASYNIDENGNGFIFFGDNAA 268 (453)
T ss_dssp EEEEEEEEETTEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSCCEEEECTTSCEEEEEEBTTS
T ss_pred eEEEEEEecCCCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccCCcccccccceEEEEEcCCCCEEEEECCCCc
Confidence 3567889999999999754 22 8888755677788875311 11222222223 55666655 577776654
No 333
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=23.39 E-value=2.2e+02 Score=23.12 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=35.0
Q ss_pred eEECCCCcEEEEE----------CCCCEEEEECCCCcEEEEeccccccC--CCCCcCCCceEEcCC--CCEEEEeC
Q psy4774 17 MKFDKNGALHVAD----------AYFGLYKVNVTTGQTEQLISMDTEID--GAKPQIPNSVTVDSD--GMVYWSDS 78 (120)
Q Consensus 17 l~~d~~G~l~V~d----------~~~gi~~vd~~~g~~~~~~~~~~~~~--g~~~~~pndl~v~~~--G~iy~TDs 78 (120)
+++++++.||++- ...+|++.+..++..+.+... ... ..++.+ ..|++++. +.||+...
T Consensus 249 ~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~--~~~~~~~~~~~-~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 249 GVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPI--PYSSSDNRFCF-AGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp EEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSS--CTTSTTCCSEE-EEEEECTTCTTCEEEEEE
T ss_pred EEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCC--CCCCccccccc-ccEEEcCCCCCEEEEEec
Confidence 5678888999863 112488888766666665421 111 112222 35888874 57888754
No 334
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=22.05 E-value=2.3e+02 Score=20.52 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=24.2
Q ss_pred CCccceEECCCCcEEEEECCCC-EEEEECCCCcEE
Q psy4774 12 GRPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTE 45 (120)
Q Consensus 12 g~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~ 45 (120)
.....++++++|+.+++-...+ |...|.++++..
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 4456799999998777655544 777788777643
No 335
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=21.96 E-value=2.3e+02 Score=20.44 Aligned_cols=51 Identities=10% Similarity=0.022 Sum_probs=30.0
Q ss_pred CCcEEEE-ECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 22 NGALHVA-DAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 22 ~G~l~V~-d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
.+.+|++ ....| |...|..+++...... ..+.+ ...|+++|+|+...+-+.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~----~~~~~---V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPI----QLGMP---IVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEE----ECSSC---EEEEEECTTSSEEEEEES
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEec----CCCCc---EEEEEEcCCCCEEEEEeC
Confidence 3456655 44455 5556776665432211 12223 569999999998777664
No 336
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=21.69 E-value=1.4e+02 Score=17.80 Aligned_cols=41 Identities=27% Similarity=0.314 Sum_probs=22.8
Q ss_pred EEcCCCCEEEEeCCCC---ccccccee---------cc---eecCCceEEEEcCCC
Q psy4774 66 TVDSDGMVYWSDSSTK---YKLYDGLF---------DG---LTSGSGSFIKIGPNT 106 (120)
Q Consensus 66 ~v~~~G~iy~TDs~~~---~~~~~~~~---------~~---~~~~~G~l~~~d~~~ 106 (120)
.++++|++|+-+...+ |.+..... .. ...+.||+|.||..+
T Consensus 19 ~~~~~Gr~YYyN~~T~~s~We~P~~~~~~~e~~~~~~~W~~~~~~~Gr~Yy~N~~T 74 (92)
T 2l5f_A 19 HKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKTYYYNSQT 74 (92)
T ss_dssp EECTTSCEEEEETTTTEEESSCSGGGTCHHHHHHHSCSEEEEECTTCCEEEEETTT
T ss_pred EEcCCCCEEEEECCCCceecccCccccccccccccccceEEEECCCCCEEEEECCC
Confidence 3566777777776543 32211100 01 134678999998876
No 337
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=21.34 E-value=3.3e+02 Score=22.06 Aligned_cols=56 Identities=13% Similarity=0.203 Sum_probs=33.3
Q ss_pred ceEECCCCcEEEEECCCCEEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEe
Q psy4774 16 GMKFDKNGALHVADAYFGLYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSD 77 (120)
Q Consensus 16 Gl~~d~~G~l~V~d~~~gi~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TD 77 (120)
+..-.++|++++.+. ..++++|.. |++.--. ...+.....-+++.+.++|++.++-
T Consensus 211 ~~~g~~nG~l~~g~G-~~i~elD~~-Gkvv~~~----~lp~g~~~~HHD~~~l~nGn~Lv~v 266 (571)
T 3elq_A 211 GIRETPRGTFTAVQG-QHWYEFDMM-GQVLEDH----KLPRGFADATHESIETPNGTVLLRV 266 (571)
T ss_dssp EEEECTTSCEEEEEB-TEEEEECTT-CCEEEEE----ECCTTEECBCSCEEECTTSCEEEEE
T ss_pred EEEecCCCCEEEecC-cEEEEECCC-CcEEEEE----ECCCCccccccceEEcCCCcEEEEE
Confidence 444455676665543 358889984 6642211 1122223456899999999988754
No 338
>2hwj_A AGR_C_2837P, hypothetical protein ATU1540; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.61A {Agrobacterium tumefaciens str} SCOP: d.268.1.3
Probab=21.07 E-value=43 Score=23.62 Aligned_cols=18 Identities=17% Similarity=0.154 Sum_probs=15.1
Q ss_pred CCceEEcCCCCEEEEeCC
Q psy4774 62 PNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 62 pndl~v~~~G~iy~TDs~ 79 (120)
|-=|++.++|.+|+||--
T Consensus 52 pipVVigp~g~lyl~DgH 69 (205)
T 2hwj_A 52 IVPVVAGPKDRAYLIDHH 69 (205)
T ss_dssp EEEEEECSTTCEEECSCH
T ss_pred CceEEECCCCCEEEECCh
Confidence 445888999999999984
No 339
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=20.88 E-value=2.4e+02 Score=20.37 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=34.7
Q ss_pred CccceEECCCCcEEEEECCCC-EEEEECCCCcEEEEeccccccCCCCCcCCCceEEcCCCCEEEEeCC
Q psy4774 13 RPLGMKFDKNGALHVADAYFG-LYKVNVTTGQTEQLISMDTEIDGAKPQIPNSVTVDSDGMVYWSDSS 79 (120)
Q Consensus 13 ~P~Gl~~d~~G~l~V~d~~~g-i~~vd~~~g~~~~~~~~~~~~~g~~~~~pndl~v~~~G~iy~TDs~ 79 (120)
....++++ ++++++-...| |...|.++++....... ...+..-.....++++++|.+.++-+.
T Consensus 364 ~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 364 AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVT--LESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEE--CTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeec--cccCCCCceEEEEEecCCEEEEEEccc
Confidence 34567775 45555544444 66678777764322210 001112234578889998887766654
No 340
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=20.45 E-value=57 Score=18.05 Aligned_cols=14 Identities=21% Similarity=-0.005 Sum_probs=11.8
Q ss_pred CceEEcCCCCEEEE
Q psy4774 63 NSVTVDSDGMVYWS 76 (120)
Q Consensus 63 ndl~v~~~G~iy~T 76 (120)
--|.++.+|.+|+-
T Consensus 5 i~v~I~~dG~~~~~ 18 (74)
T 2jwk_A 5 VILEVAGIGKYAIS 18 (74)
T ss_dssp EEEEECSSSCEEEE
T ss_pred EEEEEecCccEEEe
Confidence 35789999999998
Done!