RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4780
         (156 letters)



>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561
          {Streptococcus pneumoniae [TaxId: 1313]}
          Length = 79

 Score = 24.3 bits (53), Expect = 3.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 75 DLLGKYPDFLAFFVCLGYALL 95
          +++ K+P+ L   V LG+  L
Sbjct: 15 EVVDKHPEVLEILVELGFKPL 35



 Score = 24.3 bits (53), Expect = 3.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 131 DLLGKYPDFLAFFVCLGYALL 151
           +++ K+P+ L   V LG+  L
Sbjct: 15  EVVDKHPEVLEILVELGFKPL 35


>d3buxb1 a.39.1.7 (B:178-263) Cbl {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 86

 Score = 23.7 bits (51), Expect = 5.6
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 14 EFWAFVIGWNIILEHMIGKHMVCK-HMIGAASVARAWSGYVDSLCGGAISNF 64
          EFW    G   I+     +  + + H I +   A A    +D  C   IS F
Sbjct: 11 EFWRKAFGEKTIVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVF 62


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.143    0.464 

Gapped
Lambda     K      H
   0.267   0.0622    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 618,637
Number of extensions: 26159
Number of successful extensions: 83
Number of sequences better than 10.0: 1
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 7
Length of query: 156
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 78
Effective length of database: 1,336,656
Effective search space: 104259168
Effective search space used: 104259168
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 49 (22.9 bits)