BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4781
(83 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BLQ7|CTR4_MOUSE Cationic amino acid transporter 4 OS=Mus musculus GN=Slc7a4 PE=1
SV=1
Length = 635
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCFY 61
G + S+++N + +L+V+ +IV+GF R NW E GGF P+G SG++AG ATCFY
Sbjct: 187 GARVSSWLNHTFSAISLIVILFIIVLGFILARPHNWSAEEGGFAPFGFSGILAGTATCFY 246
Query: 62 AYVGFD 67
A+VGFD
Sbjct: 247 AFVGFD 252
>sp|P18581|CTR2_MOUSE Low affinity cationic amino acid transporter 2 OS=Mus musculus
GN=Slc7a2 PE=1 SV=3
Length = 657
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 24/90 (26%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INE-------------------- 40
GVK SA++N F T N++V+ V+V GF G + NW I+E
Sbjct: 183 GVKESAWVNKFFTAINILVLLFVMVAGFVKGNVANWKISEEFLKNISASAREPPSENGTS 242
Query: 41 ---GGGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+PYG +G +AGAATCFYA+VGFD
Sbjct: 243 IYGAGGFMPYGFTGTLAGAATCFYAFVGFD 272
>sp|B5D5N9|CTR2_RAT Low affinity cationic amino acid transporter 2 OS=Rattus norvegicus
GN=Slc7a2 PE=2 SV=1
Length = 657
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 24/90 (26%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INE-------------------- 40
GVK SA++N F T N++V+ V+V GF G + NW I+E
Sbjct: 183 GVKESAWVNKFFTAINILVLLFVMVAGFVKGNVANWKISEEFLKNISASAREPPSENGTS 242
Query: 41 ---GGGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+PYG +G +AGAATCFYA+VGFD
Sbjct: 243 IYGAGGFMPYGFTGTLAGAATCFYAFVGFD 272
>sp|P52569|CTR2_HUMAN Low affinity cationic amino acid transporter 2 OS=Homo sapiens
GN=SLC7A2 PE=1 SV=2
Length = 658
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 24/90 (26%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INE-------------------- 40
GVK SA++N T N++V+ V+V GF G + NW I+E
Sbjct: 183 GVKESAWVNKVFTAVNILVLLFVMVAGFVKGNVANWKISEEFLKNISASAREPPSENGTS 242
Query: 41 ---GGGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+PYG +G +AGAATCFYA+VGFD
Sbjct: 243 IYGAGGFMPYGFTGTLAGAATCFYAFVGFD 272
>sp|P30825|CTR1_HUMAN High affinity cationic amino acid transporter 1 OS=Homo sapiens
GN=SLC7A1 PE=1 SV=1
Length = 629
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 23/88 (26%)
Query: 3 VKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-------------------INEG-- 41
VK SA +N T N++V+G ++V GF G + NW EG
Sbjct: 183 VKESAMVNKIFTCINVLVLGFIMVSGFVKGSVKNWQLTEEDFGNTSGRLCLNNDTKEGKP 242
Query: 42 --GGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+P+G SGV++GAATCFYA+VGFD
Sbjct: 243 GVGGFMPFGFSGVLSGAATCFYAFVGFD 270
>sp|O43246|CTR4_HUMAN Cationic amino acid transporter 4 OS=Homo sapiens GN=SLC7A4 PE=2
SV=3
Length = 635
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCFY 61
G + S+++N + +L+V+ ++++GF + NW + GGF P+G SGV+AG A+CFY
Sbjct: 187 GARVSSWLNHTFSAISLLVILFIVILGFILAQPHNWSADEGGFAPFGFSGVMAGTASCFY 246
Query: 62 AYVGFD 67
A+VGFD
Sbjct: 247 AFVGFD 252
>sp|B3TP03|CTR2_CHICK Low affinity cationic amino acid transporter 2 OS=Gallus gallus
GN=SLC7A2 PE=2 SV=1
Length = 654
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 25/90 (27%)
Query: 3 VKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INE--------------------- 40
VK SA++N T N++V+ V++ GF G +DNW I+E
Sbjct: 183 VKESAWVNKIFTAINILVLLFVMISGFVKGDVDNWRISEEYLINLSEIAENFSSYKNVTS 242
Query: 41 ---GGGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+PYG +G +AGAATCFYA+VGFD
Sbjct: 243 IYGSGGFMPYGFTGTLAGAATCFYAFVGFD 272
>sp|P30823|CTR1_RAT High affinity cationic amino acid transporter 1 OS=Rattus
norvegicus GN=Slc7a1 PE=2 SV=1
Length = 624
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 18/83 (21%)
Query: 3 VKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INEG-----------------GGF 44
VK SA +N T N++V+ ++V GF G ++NW + E GGF
Sbjct: 183 VKESAMVNKIFTCINVLVLCFIMVSGFVKGSIENWQLTENKSSPLCGNNDTNVKYGEGGF 242
Query: 45 LPYGISGVVAGAATCFYAYVGFD 67
+P+G SGV++GAATCFYA+VGFD
Sbjct: 243 MPFGFSGVLSGAATCFYAFVGFD 265
>sp|Q09143|CTR1_MOUSE High affinity cationic amino acid transporter 1 OS=Mus musculus
GN=Slc7a1 PE=2 SV=1
Length = 622
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 16/81 (19%)
Query: 3 VKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INEG---------------GGFLP 46
VK SA +N T N++V+ ++V GF G + NW + E GGF+P
Sbjct: 183 VKESAMVNKIFTCINVLVLCFIVVSGFVKGSIKNWQLTEKNFSCNNNDTNVKYGEGGFMP 242
Query: 47 YGISGVVAGAATCFYAYVGFD 67
+G SGV++GAATCFYA+VGFD
Sbjct: 243 FGFSGVLSGAATCFYAFVGFD 263
>sp|A8I499|CTR2_PIG Low affinity cationic amino acid transporter 2 OS=Sus scrofa
GN=SLC7A2 PE=2 SV=1
Length = 657
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 24/90 (26%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW------------------------ 37
GVK SA++N T N++V+ V+V GF G + N
Sbjct: 183 GVKESAWVNKVFTAVNILVLLFVMVAGFVKGNVANRKISEEFLKNISASAREPPSENGTS 242
Query: 38 INEGGGFLPYGISGVVAGAATCFYAYVGFD 67
I GGF+PYG +G +AGAATCFYA+VGFD
Sbjct: 243 IYGAGGFMPYGFTGTLAGAATCFYAFVGFD 272
>sp|Q8WY07|CTR3_HUMAN Cationic amino acid transporter 3 OS=Homo sapiens GN=SLC7A3 PE=1
SV=1
Length = 619
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 21/83 (25%)
Query: 6 SAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-------------INE--------GGGF 44
SA + T NL+V+G V++ GF G + NW +N+ GGF
Sbjct: 186 SALVTKVFTGVNLLVLGFVMISGFVKGDVHNWKLTEEDYELAMAELNDTYSLGPLGSGGF 245
Query: 45 LPYGISGVVAGAATCFYAYVGFD 67
+P+G G++ GAATCFYA+VGFD
Sbjct: 246 VPFGFEGILRGAATCFYAFVGFD 268
>sp|P70423|CTR3_MOUSE Cationic amino acid transporter 3 OS=Mus musculus GN=Slc7a3 PE=2
SV=1
Length = 618
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 21/83 (25%)
Query: 6 SAFINSFLTLANLMVMGIVIVVGFYYGRLDNW----------INEG-----------GGF 44
SA + T NL+V+ VI+ GF G L NW ++E GGF
Sbjct: 186 SALVTKVFTGMNLLVLSFVIISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGF 245
Query: 45 LPYGISGVVAGAATCFYAYVGFD 67
+P+G+ G++ GAATCFYA+VGFD
Sbjct: 246 MPFGLEGILRGAATCFYAFVGFD 268
>sp|A0JNI9|S7A14_BOVIN Probable cationic amino acid transporter OS=Bos taurus GN=SLC7A14
PE=2 SV=1
Length = 771
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+GVK S N+ L + NL V +++ GF++ W G FLPYG SGV+ GAATCF
Sbjct: 205 LGVKNSVGFNNVLNVLNLAVWVFIMIAGFFFINGKYWAE--GQFLPYGWSGVLQGAATCF 262
Query: 61 YAYVGFD 67
YA++GFD
Sbjct: 263 YAFIGFD 269
>sp|O08812|CTR3_RAT Cationic amino acid transporter 3 OS=Rattus norvegicus GN=Slc7a3
PE=2 SV=1
Length = 619
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 21/83 (25%)
Query: 6 SAFINSFLTLANLMVMGIVIVVGFYYGRLDNW----------INEG-----------GGF 44
S + T NL+V+G VI+ GF G L NW ++E GGF
Sbjct: 186 SGLVTKVFTGMNLLVLGFVIISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGF 245
Query: 45 LPYGISGVVAGAATCFYAYVGFD 67
+P+G+ G++ GAATCFYA+VGFD
Sbjct: 246 MPFGLEGILRGAATCFYAFVGFD 268
>sp|Q8BXR1|S7A14_MOUSE Probable cationic amino acid transporter OS=Mus musculus GN=Slc7a14
PE=2 SV=1
Length = 771
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+GVK S N+ L + NL V +++ G ++ W G FLP+G SGV+ GAATCF
Sbjct: 205 LGVKNSVGFNNVLNVLNLAVWVFIMIAGLFFINGKYWAE--GQFLPHGWSGVLQGAATCF 262
Query: 61 YAYVGFD 67
YA++GFD
Sbjct: 263 YAFIGFD 269
>sp|Q8TBB6|S7A14_HUMAN Probable cationic amino acid transporter OS=Homo sapiens GN=SLC7A14
PE=2 SV=3
Length = 771
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+GVK S N+ L + NL V +++ G ++ W G FLP+G SGV+ GAATCF
Sbjct: 205 LGVKNSIGFNNVLNVLNLAVWVFIMIAGLFFINGKYWAE--GQFLPHGWSGVLQGAATCF 262
Query: 61 YAYVGFD 67
YA++GFD
Sbjct: 263 YAFIGFD 269
>sp|Q6DCE8|CTR2_XENLA Low affinity cationic amino acid transporter 2 OS=Xenopus laevis
GN=slc7a2 PE=2 SV=1
Length = 622
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 25/91 (27%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWI-------------------NE-- 40
GVK S +N T N++V+ VI G G L W NE
Sbjct: 183 GVKESTAVNKVFTAINILVLLFVIASGCVTGNLKYWKMSKEDLWATKQSVSNHSIGNETG 242
Query: 41 ----GGGFLPYGISGVVAGAATCFYAYVGFD 67
GGF+P+G SG +AGAATCFYA+VGFD
Sbjct: 243 LDFGAGGFMPFGFSGTLAGAATCFYAFVGFD 273
>sp|Q8GYB4|CAAT3_ARATH Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis
thaliana GN=CAT3 PE=2 SV=1
Length = 609
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWI--NEGGGFLPYGISGVVAGAAT 58
+GVK S F +T AN+ VM VIV G Y W+ G+ PYG+ G++ G+AT
Sbjct: 180 LGVKESTFAQGIVTTANVFVMIFVIVAGSYLCFKTGWVGYELPTGYFPYGVDGMLTGSAT 239
Query: 59 CFYAYVGFD 67
F+AY+GFD
Sbjct: 240 VFFAYIGFD 248
>sp|Q797A7|YFNA_BACSU Uncharacterized amino acid permease YfnA OS=Bacillus subtilis
(strain 168) GN=yfnA PE=3 SV=1
Length = 461
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCFY 61
GVK S N+ + L + ++ + I+VG Y + DNW F+P+G+ GV+ AAT F+
Sbjct: 175 GVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNW----SPFMPFGMKGVILSAATVFF 230
Query: 62 AYVGFD 67
AY+GFD
Sbjct: 231 AYLGFD 236
>sp|Q9ASS7|CAAT2_ARATH Cationic amino acid transporter 2, vacuolar OS=Arabidopsis thaliana
GN=CAT2 PE=1 SV=1
Length = 635
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWI--NEGGGFLPYGISGVVAGAAT 58
MG+K S F +T N+ V+ VIV G Y G W GF P+G+ G+ AG+AT
Sbjct: 191 MGIKESTFAQGIVTAVNVCVLLFVIVAGSYLGFKTGWPGYELPTGFFPFGVDGMFAGSAT 250
Query: 59 CFYAYVGFDK 68
F+A++GFD
Sbjct: 251 VFFAFIGFDS 260
>sp|Q8W4K3|CAAT4_ARATH Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana
GN=CAT4 PE=1 SV=1
Length = 600
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWI--NEGGGFLPYGISGVVAGAATC 59
G+K S+ + + +T N+ + +IVVG Y W+ + G+ P+G++G++AG+A
Sbjct: 176 GIKESSTVQAIVTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYFPFGLNGILAGSAVV 235
Query: 60 FYAYVGFD 67
F++Y+GFD
Sbjct: 236 FFSYIGFD 243
>sp|Q84MA5|CAAT1_ARATH Cationic amino acid transporter 1 OS=Arabidopsis thaliana GN=CAT1
PE=1 SV=1
Length = 594
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+G KGS+ N ++ +++V+ VI+ GF + N+ + F PYG+ GV AA F
Sbjct: 220 VGTKGSSRFNYIASIIHMVVILFVIIAGFTKADVKNYSD----FTPYGVRGVFKSAAVLF 275
Query: 61 YAYVGFD 67
+AY+GFD
Sbjct: 276 FAYIGFD 282
>sp|O07576|YHDG_BACSU Uncharacterized amino acid permease YhdG OS=Bacillus subtilis
(strain 168) GN=yhdG PE=2 SV=1
Length = 465
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+G+K S +N+ + + ++V+ + I V Y + NW F+P G GV + AA F
Sbjct: 177 LGIKESKRVNNIMVILKILVVLLFIAVAAVYVKPHNW----QPFMPMGFGGVFSAAALVF 232
Query: 61 YAYVGFD 67
+A++GFD
Sbjct: 233 FAFIGFD 239
>sp|Q9SQZ0|CAAT7_ARATH Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis
thaliana GN=CAT7 PE=3 SV=1
Length = 584
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYG------RLDNWINEGGGFLPYGISGVVAG 55
+ S+ +N LT ++ + VIV+GF G R DN N G F P+G+SGV G
Sbjct: 207 STRESSKVNMVLTALHIAFIVFVIVMGFSKGDVKNLTRPDNPENPSG-FFPFGVSGVFNG 265
Query: 56 AATCFYAYVGFD 67
AA + +Y+G+D
Sbjct: 266 AAMVYLSYIGYD 277
>sp|Q5PR34|CTR2_DANRE Low affinity cationic amino acid transporter 2 OS=Danio rerio
GN=slc7a2 PE=2 SV=1
Length = 640
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 25/91 (27%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-INEGG----GFLPYGISG----- 51
GVK SA++N T N++V+ VI+ GF G NW I+E + IS
Sbjct: 181 GVKESAWVNKIFTAVNVLVLMFVIISGFVKGDSLNWNISEESLVNITVVKRNISSAANVT 240
Query: 52 ---------------VVAGAATCFYAYVGFD 67
+AGAATCFYA+VGFD
Sbjct: 241 SDYGAGGFFPYGFGGTLAGAATCFYAFVGFD 271
>sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis
thaliana GN=CAT9 PE=2 SV=1
Length = 569
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
GV+ S+ +NS +T ++++ +VI G + + NW F P G V+ GA F
Sbjct: 204 QGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANW----SPFAPNGFKAVLTGATVVF 259
Query: 61 YAYVGFD 67
++YVGFD
Sbjct: 260 FSYVGFD 266
>sp|O64759|CAAT5_ARATH Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5
PE=1 SV=1
Length = 569
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MGVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCF 60
+ + ++ +N + N +V+ VI+ GF + N FLP+G GV AA +
Sbjct: 213 ISTRKTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTP----FLPFGPEGVFRAAAVVY 268
Query: 61 YAYVGFDK 68
+AY GFD
Sbjct: 269 FAYGGFDS 276
>sp|Q9LZ20|CAAT6_ARATH Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis
thaliana GN=CAT6 PE=2 SV=1
Length = 583
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 4 KGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNW-----INEGGGFLPYGISGVVAGAAT 58
+ S+ +N +T ++ + VIV+GF G N GF P+G +GV GAA
Sbjct: 210 RESSKVNMIMTAFHIAFIFFVIVMGFIKGDSKNLSSPANPEHPSGFFPFGAAGVFNGAAM 269
Query: 59 CFYAYVGFD 67
+ +Y+G+D
Sbjct: 270 VYLSYIGYD 278
>sp|Q9SHH0|CAAT8_ARATH Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana
GN=CAT8 PE=1 SV=1
Length = 590
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 2 GVKGSAFINSFLTLANLMVMGIVIVVGFYYGRLDNWINEGGGFLPYGISGVVAGAATCFY 61
G K ++++N ++ + ++ ++VVGF + + N + F PYG GVV AA ++
Sbjct: 232 GTKRTSWLNLITSMVTVCIIVFIVVVGFTHSKTSNLVP----FFPYGAKGVVQSAAVVYW 287
Query: 62 AYVGFD 67
+Y GFD
Sbjct: 288 SYTGFD 293
>sp|Q8YWR1|TRUB_NOSS1 tRNA pseudouridine synthase B OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=truB PE=3 SV=1
Length = 293
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 48 GISGVVAGAATCFYAYVGFDKCWKCLIRIGVRTT 81
G+ + G AT Y+ DK +K +R GV+TT
Sbjct: 43 GVLPIAVGKATRLLQYLPSDKAYKATVRFGVQTT 76
>sp|Q3M356|TRUB_ANAVT tRNA pseudouridine synthase B OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=truB PE=3 SV=1
Length = 293
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 48 GISGVVAGAATCFYAYVGFDKCWKCLIRIGVRTT 81
G+ + G AT Y+ DK +K +R GV+TT
Sbjct: 43 GVLPIAVGKATRLLQYLPSDKAYKATVRFGVQTT 76
>sp|O79556|NU5M_DINSE NADH-ubiquinone oxidoreductase chain 5 OS=Dinodon semicarinatum
GN=MT-ND5 PE=3 SV=1
Length = 590
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 10 NSFLTLANLMVMGIVIVVGFY 30
+SFLT+ANL +MG+ + GFY
Sbjct: 359 SSFLTIANLSLMGMPFLSGFY 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.148 0.487
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,372,339
Number of Sequences: 539616
Number of extensions: 1208303
Number of successful extensions: 3958
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3885
Number of HSP's gapped (non-prelim): 57
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)