BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4784
(78 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307209228|gb|EFN86335.1| Uncharacterized protein C9orf80-like protein [Harpegnathos
saltator]
Length = 102
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 15/92 (16%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAPN------------SPPISNSMSADQLQ---HQRAA 46
ELQNRKILE+LQ+KKQ+LLKQG AP+ + IS + S+D + QRAA
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPSLTSSLAVSSTGSASNISTTQSSDGIAMSASQRAA 69
Query: 47 LITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
L A+A S G+++TQDSSFGN++LPVLPR+D+
Sbjct: 70 LHNAHAASFGYFVTQDSSFGNLILPVLPRFDS 101
>gi|383854185|ref|XP_003702602.1| PREDICTED: methyltransferase-like protein 5-like [Megachile
rotundata]
Length = 314
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 14/90 (15%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP--------------NSPPISNSMSADQLQHQRAAL 47
E+QNRKILE+LQ+KKQ+LLKQG P N PP S QRAAL
Sbjct: 10 EVQNRKILEELQLKKQMLLKQGVVPTLNTSLAVTSTGSSNLPPTQTSDGVAMSASQRAAL 69
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99
>gi|328792098|ref|XP_001121923.2| PREDICTED: methyltransferase-like protein 5-like [Apis mellifera]
Length = 314
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 14/90 (15%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQL------------QHQRAAL 47
ELQNRKILE+LQ+KKQ+LLKQG AP N+ ++++ S L QRAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTSLVTSTGSPSNLPSTQPSDGVAMSASQRAAL 69
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99
>gi|380017025|ref|XP_003692467.1| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein
5-like [Apis florea]
Length = 314
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 14/90 (15%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQL------------QHQRAAL 47
ELQNRKILE+LQ+KKQ+LLKQG AP N+ ++++ S L QRAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTSLVTSTGSPSNLPSTQPSDGVAMSASQRAAL 69
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99
>gi|307191267|gb|EFN74914.1| Methyltransferase-like protein 5 [Camponotus floridanus]
Length = 315
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP---NSPPISNSMSADQL------------QHQRAA 46
ELQNRKILE++Q+KKQ+LLKQG AP +S +S++ SA + QRAA
Sbjct: 10 ELQNRKILEEIQLKKQMLLKQGVAPTLNSSLGVSSTGSASSIPAIQSNDGVAMSASQRAA 69
Query: 47 LITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
L A+A S G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 LHNAHAASFGYFVTQDSSFGNLILPVLPRFD 100
>gi|332019817|gb|EGI60278.1| SOSS complex subunit C-like protein [Acromyrmex echinatior]
Length = 101
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 14/90 (15%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQLQ------------HQRAAL 47
ELQNRKILE+LQ+KKQ+LLKQG AP N+ +S++ S + RAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTLGVSSTGSVSNIAATQSNDGVAMTASARAAL 69
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
A+A S G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASFGYFVTQDSSFGNLILPVLPRFD 99
>gi|357617543|gb|EHJ70851.1| hypothetical protein KGM_12463 [Danaus plexippus]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 28/105 (26%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGA--------------APNS-------PPISNSMSADQL 40
EL NRKILE+LQ+KKQ+L+KQGA +P S PP+S + QL
Sbjct: 11 ELTNRKILEELQLKKQMLMKQGAVAPLTATTISLAQPSPVSQLPMCSIPPLSATAGFPQL 70
Query: 41 QH-------QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
RAAL ANA S GF+++QDSSFGN +LPVLPR+++
Sbjct: 71 PEANIVNTSHRAALQHANATSWGFFVSQDSSFGNQILPVLPRFES 115
>gi|350401839|ref|XP_003486277.1| PREDICTED: methyltransferase-like protein 5-like [Bombus impatiens]
Length = 313
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 14/91 (15%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP--------------NSPPISNSMSADQLQHQRAAL 47
ELQNRKILE+LQ+KKQLLLKQG AP N PP S QRAAL
Sbjct: 10 ELQNRKILEELQLKKQLLLKQGVAPTLNTSLAVTSTGPSNLPPTQTSDGVVMNASQRAAL 69
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
A+A S+G+++TQDSSFGN++LPVLPR+DA
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFDA 100
>gi|340718380|ref|XP_003397646.1| PREDICTED: methyltransferase-like protein 5-like [Bombus
terrestris]
Length = 314
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP---------------NSPPISNSMSADQLQHQRAA 46
ELQNRKILE+LQ+KKQLLLKQG AP N PP S QRAA
Sbjct: 10 ELQNRKILEELQLKKQLLLKQGVAPTLNTSLAVTSTGCPSNLPPTQTSDGVVMNASQRAA 69
Query: 47 LITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
L A+A S+G+++TQDSSFGN++LPVLPR+DA
Sbjct: 70 LHNAHAASSGYFVTQDSSFGNLILPVLPRFDA 101
>gi|57528972|ref|NP_001006585.1| SOSS complex subunit C [Gallus gallus]
gi|82081433|sp|Q5ZJ32.1|SOSSC_CHICK RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|53133864|emb|CAG32261.1| hypothetical protein RCJMB04_21d4 [Gallus gallus]
Length = 103
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 14/85 (16%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
IL +LQ K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 18 ILAELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAH 77
Query: 54 STGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78 SSGYFITQDSAFGNLILPVLPRLEA 102
>gi|47229480|emb|CAF99468.1| unnamed protein product [Tetraodon nigroviridis]
Length = 575
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Query: 15 KKQLLLKQGAAPNSP----PISNSMSADQL------QH----QRAALITANAQSTGFYIT 60
K++ L Q + NSP P+S+ S ++ QH Q+AAL A+ S+GF+IT
Sbjct: 497 KEKRRLMQNQSMNSPGANIPLSSRASLKEVRDSAEQQHIAAQQKAALQHAHGHSSGFFIT 556
Query: 61 QDSSFGNIVLPVLPRYD 77
QDSSFGN++LPVLPR D
Sbjct: 557 QDSSFGNLILPVLPRLD 573
>gi|291224059|ref|XP_002732024.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 122
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 28/102 (27%)
Query: 2 ELQNRKILEDLQM-KKQLLLKQGAA--------------------------PNSPPISNS 34
E QNRKILEDLQ KK+L + QG P P + +
Sbjct: 16 EKQNRKILEDLQQEKKRLRMMQGQGQTNSMSSTSSVVPGNQTIQRPVPVKEPVLPVLRDP 75
Query: 35 MSADQL-QHQRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
A L QR AL A+A S F+ITQDSSFGN++LPV+PR
Sbjct: 76 TEAHHLAMSQRTALQHAHANSAAFFITQDSSFGNLILPVIPR 117
>gi|41055534|ref|NP_956513.1| SOSS complex subunit C [Danio rerio]
gi|82188569|sp|Q7ZV26.1|SOSSC_DANRE RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|28277954|gb|AAH46030.1| Zgc:56259 [Danio rerio]
gi|47937878|gb|AAH71348.1| Zgc:56259 [Danio rerio]
Length = 103
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 13/83 (15%)
Query: 8 ILEDLQMKKQLLLKQ------GAA-PNSPPISNSMSADQL--QH----QRAALITANAQS 54
IL +L +K+ L++ GA+ P S P N DQ QH Q+AAL A+A S
Sbjct: 18 ILAELDKEKRRLIQSQTLNNPGASIPLSRPAVNKEFRDQAEQQHIAAQQKAALQHAHAHS 77
Query: 55 TGFYITQDSSFGNIVLPVLPRYD 77
+GF+ITQDSSFGN++LPVLPR D
Sbjct: 78 SGFFITQDSSFGNLILPVLPRLD 100
>gi|344271485|ref|XP_003407568.1| PREDICTED: SOSS complex subunit C-like [Loxodonta africana]
Length = 107
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LLL+ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 21 ILAELDKEKRKLLLQNQSSANHPGASIALSRPSLHKDFRDHAEQQHIAAQQKAALQHAHA 80
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 81 HSSGYFITQDSAFGNLILPVLPRLD 105
>gi|6841232|gb|AAF28969.1|AF161409_1 HSPC291 [Homo sapiens]
Length = 152
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 66 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 125
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 126 HSSGYFITQDSAFGNLILPVLPRLD 150
>gi|387018778|gb|AFJ51507.1| SOSS complex subunit C-like [Crotalus adamanteus]
Length = 104
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + + P +N S++ D H Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGANISLARSSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|410978921|ref|XP_003995836.1| PREDICTED: SOSS complex subunit C [Felis catus]
Length = 189
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 103 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 162
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 163 HSSGYFITQDSAFGNLILPVLPRLD 187
>gi|24308269|ref|NP_067041.1| SOSS complex subunit C [Homo sapiens]
gi|336088669|ref|NP_001229522.1| SOSS complex subunit C [Pan troglodytes]
gi|359718902|ref|NP_001240771.1| SOSS complex subunit C [Equus caballus]
gi|296190598|ref|XP_002743252.1| PREDICTED: SOSS complex subunit C [Callithrix jacchus]
gi|332229759|ref|XP_003264054.1| PREDICTED: SOSS complex subunit C [Nomascus leucogenys]
gi|397479169|ref|XP_003810900.1| PREDICTED: SOSS complex subunit C [Pan paniscus]
gi|402896647|ref|XP_003911402.1| PREDICTED: SOSS complex subunit C isoform 1 [Papio anubis]
gi|402896649|ref|XP_003911403.1| PREDICTED: SOSS complex subunit C isoform 2 [Papio anubis]
gi|403266181|ref|XP_003925273.1| PREDICTED: SOSS complex subunit C [Saimiri boliviensis boliviensis]
gi|403266183|ref|XP_003925274.1| PREDICTED: SOSS complex subunit C [Saimiri boliviensis boliviensis]
gi|74752933|sp|Q9NRY2.1|SOSSC_HUMAN RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1;
Short=hSSBIP1
gi|8749095|gb|AAF28971.2|AF161411_1 HSPC043 protein [Homo sapiens]
gi|15928842|gb|AAH14881.1| Chromosome 9 open reading frame 80 [Homo sapiens]
gi|40807111|gb|AAH65210.1| C9orf80 protein [Homo sapiens]
gi|90079423|dbj|BAE89391.1| unnamed protein product [Macaca fascicularis]
gi|119579517|gb|EAW59113.1| chromosome 9 open reading frame 80 [Homo sapiens]
gi|123983180|gb|ABM83331.1| chromosome 9 open reading frame 80 [synthetic construct]
gi|123997881|gb|ABM86542.1| chromosome 9 open reading frame 80 [synthetic construct]
gi|328909017|gb|AEB61176.1| SOSS complex subunit C-like protein [Equus caballus]
gi|355567521|gb|EHH23862.1| Sensor of single-strand DNA complex subunit C [Macaca mulatta]
gi|355753104|gb|EHH57150.1| Sensor of single-strand DNA complex subunit C [Macaca fascicularis]
gi|380785557|gb|AFE64654.1| SOSS complex subunit C [Macaca mulatta]
gi|383413783|gb|AFH30105.1| SOSS complex subunit C [Macaca mulatta]
gi|410215362|gb|JAA04900.1| chromosome 9 open reading frame 80 [Pan troglodytes]
gi|410247562|gb|JAA11748.1| chromosome 9 open reading frame 80 [Pan troglodytes]
gi|410247564|gb|JAA11749.1| chromosome 9 open reading frame 80 [Pan troglodytes]
gi|410247566|gb|JAA11750.1| chromosome 9 open reading frame 80 [Pan troglodytes]
gi|410247568|gb|JAA11751.1| chromosome 9 open reading frame 80 [Pan troglodytes]
gi|410247570|gb|JAA11752.1| chromosome 9 open reading frame 80 [Pan troglodytes]
Length = 104
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|281345984|gb|EFB21568.1| hypothetical protein PANDA_015570 [Ailuropoda melanoleuca]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 10 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 69
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 70 HSSGYFITQDSAFGNLILPVLPRLD 94
>gi|351710806|gb|EHB13725.1| SOSS complex subunit C [Heterocephalus glaber]
Length = 164
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 78 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 137
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 138 HSSGYFITQDSAFGNLILPVLPRLD 162
>gi|349585180|ref|NP_001231815.1| chromosome 9 open reading frame 80 ortholog [Sus scrofa]
Length = 104
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPTLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|301781140|ref|XP_002925985.1| PREDICTED: SOSS complex subunit C-like [Ailuropoda melanoleuca]
gi|345777698|ref|XP_538793.3| PREDICTED: SOSS complex subunit C [Canis lupus familiaris]
Length = 104
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|293347397|ref|XP_001061972.2| PREDICTED: SOSS complex subunit C [Rattus norvegicus]
gi|293359282|ref|XP_216387.3| PREDICTED: SOSS complex subunit C [Rattus norvegicus]
gi|149037099|gb|EDL91630.1| similar to HSPC043 protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 104
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S+S D H Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSASHPGASISLSRPSLSKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|334332911|ref|XP_001375991.2| PREDICTED: hypothetical protein LOC100024869 [Monodelphis
domestica]
Length = 227
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 141 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPPLNKDFRDHAEQQHIAAQQKAALQHAHA 200
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 201 HSSGYFITQDSAFGNLILPVLPRLD 225
>gi|126321166|ref|XP_001375633.1| PREDICTED: SOSS complex subunit C-like [Monodelphis domestica]
Length = 159
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 17/86 (19%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMS-----------ADQLQH----QRAALITAN 51
IL +L + K++LL++ ++ N P S ++S A+Q QH Q+AAL A+
Sbjct: 73 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPPLNKDFRDHAEQ-QHIAAQQKAALQHAH 131
Query: 52 AQSTGFYITQDSSFGNIVLPVLPRYD 77
A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 132 AHSSGYFITQDSAFGNLILPVLPRLD 157
>gi|440896568|gb|ELR48464.1| SOSS complex subunit C, partial [Bos grunniens mutus]
Length = 96
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 10 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPALNKDFRDHAEQQHIAAQQKAALQHAHA 69
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 70 HSSGYFITQDSAFGNLILPVLPRLD 94
>gi|118151206|ref|NP_001071532.1| SOSS complex subunit C [Bos taurus]
gi|426219701|ref|XP_004004057.1| PREDICTED: SOSS complex subunit C [Ovis aries]
gi|122136473|sp|Q2NKT2.1|SOSSC_BOVIN RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|84202413|gb|AAI11657.1| Chromosome 9 open reading frame 80 ortholog [Bos taurus]
gi|296484360|tpg|DAA26475.1| TPA: SOSS complex subunit C [Bos taurus]
Length = 104
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPALNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|26330166|dbj|BAC25075.1| unnamed protein product [Mus musculus]
Length = 123
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S++ D H Q+AAL A+A
Sbjct: 37 ILAELDKEKRKLLMQNQSSTSHPGASISLSRPSLTKDFRDHAEQQHIAAQQKAALQHAHA 96
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 97 HSSGYFITQDSAFGNLILPVLPRLD 121
>gi|74143776|dbj|BAE41217.1| unnamed protein product [Mus musculus]
Length = 123
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S++ D H Q+AAL A+A
Sbjct: 37 ILAELDKEKRKLLMQNQSSTSHPGASISLSRPSLTKDFRDHAEQQHIAAQQKAALQHAHA 96
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 97 HSSGYFITQDSAFGNLILPVLPRLD 121
>gi|62526128|ref|NP_001013595.1| SOSS complex subunit C [Mus musculus]
gi|123796847|sp|Q3TXT3.1|SOSSC_MOUSE RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|74186754|dbj|BAE34832.1| unnamed protein product [Mus musculus]
gi|109732532|gb|AAI16205.1| RIKEN cDNA 1110054O05 gene [Mus musculus]
gi|109732789|gb|AAI16206.1| RIKEN cDNA 1110054O05 gene [Mus musculus]
gi|148670254|gb|EDL02201.1| RIKEN cDNA 1110054O05, isoform CRA_b [Mus musculus]
Length = 104
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S++ D H Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTSHPGASISLSRPSLTKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|328909271|gb|AEB61303.1| SOSS complex subunit C-like protein [Equus caballus]
Length = 104
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S++ D H Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTSHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|395824366|ref|XP_003785437.1| PREDICTED: SOSS complex subunit C [Otolemur garnettii]
Length = 203
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 16/90 (17%)
Query: 4 QNR-KILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAAL 47
+NR IL +L + K++LL++ ++ N P S ++S L QH Q+AAL
Sbjct: 112 KNRVAILAELDKEKRKLLMQNQSSTNHPGASIALSRPALNKDFRDHAEQQHIAAQQKAAL 171
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 172 QHAHAHSSGYFITQDSAFGNLILPVLPRLD 201
>gi|410911186|ref|XP_003969071.1| PREDICTED: SOSS complex subunit C-like [Takifugu rubripes]
Length = 103
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 15/84 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSP----PISNSMSADQL------QH----QRAALITANAQ 53
IL +L +K+ L+ Q + NSP P+S+ S ++ QH Q+AAL A+
Sbjct: 18 ILAELDKEKRRLM-QNQSMNSPGANIPLSSRPSLKEVRDSAEQQHIAAQQKAALQHAHVH 76
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR D
Sbjct: 77 SSGFFITQDSSFGNLILPVLPRLD 100
>gi|226443236|ref|NP_001140092.1| SOSS complex subunit C [Salmo salar]
gi|259511333|sp|B9EQ30.1|SOSSC_SALSA RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|221221932|gb|ACM09627.1| C9orf80 homolog [Salmo salar]
Length = 107
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 15/84 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
IL +L +K+ L+ Q ++ N+P S +S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRRLI-QNSSMNNPGASIPLSRPALNKDFRDHAEQQHIAAQQKAALQHAHAH 76
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR D
Sbjct: 77 SSGFFITQDSSFGNLILPVLPRLD 100
>gi|308736988|ref|NP_001184184.1| SOSS complex subunit C [Taeniopygia guttata]
gi|259511334|sp|B5KFM4.1|SOSSC_TAEGU RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and
NABP-interacting protein; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|197129874|gb|ACH46372.1| putative RIKEN cDNA 1110054O05 variant 1 [Taeniopygia guttata]
Length = 104
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALTRSPLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLEA 103
>gi|47216956|emb|CAG04898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 91
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
QRAAL A+A S+GF++TQDSSFGN++LPVLPR +
Sbjct: 55 QRAALQHAHAHSSGFFVTQDSSFGNLILPVLPRLE 89
>gi|354486782|ref|XP_003505557.1| PREDICTED: SOSS complex subunit C-like [Cricetulus griseus]
gi|344244565|gb|EGW00669.1| SOSS complex subunit C [Cricetulus griseus]
Length = 104
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ + P S S+S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSASHPGASISLSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|432884242|ref|XP_004074452.1| PREDICTED: SOSS complex subunit C-like [Oryzias latipes]
Length = 125
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 18/86 (20%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSP----PISNSM--------SADQLQH----QRAALITAN 51
IL +L +K+ LL Q + NSP P+++S SA+Q QH Q+AAL A+
Sbjct: 39 ILAELDKEKRRLL-QSQSMNSPGATIPLASSRPSLKEARDSAEQ-QHIAAQQKAALQHAH 96
Query: 52 AQSTGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR +
Sbjct: 97 GHSSGFFITQDSSFGNLILPVLPRLE 122
>gi|395514511|ref|XP_003761460.1| PREDICTED: SOSS complex subunit C [Sarcophilus harrisii]
Length = 104
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPPLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|242002660|ref|XP_002435973.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499309|gb|EEC08803.1| conserved hypothetical protein [Ixodes scapularis]
Length = 88
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
Query: 1 MELQNRKILEDLQMKKQLLLKQGAAPNSPPI------SNSMSADQLQ-HQRAALITANAQ 53
+ELQNRKILE+LQ KKQLLLKQG SP + N+ A L QR AL A++
Sbjct: 3 VELQNRKILEELQQKKQLLLKQGQGNASPAVLPATVTPNTTDAHALTTSQRTALQHAHST 62
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S GF+I QDSSFGN++LPVLPR+D
Sbjct: 63 SVGFFIPQDSSFGNLILPVLPRFD 86
>gi|449267530|gb|EMC78466.1| SOSS complex subunit C [Columba livia]
Length = 103
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 17 ILAELDKEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHA 76
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 77 HSSGYFITQDSAFGNLILPVLPRLEA 102
>gi|348542120|ref|XP_003458534.1| PREDICTED: SOSS complex subunit C-like [Oreochromis niloticus]
Length = 103
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 15/84 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSP----PISNSMSADQL------QH----QRAALITANAQ 53
IL +L +K+ LL Q + NSP P+S+ S ++ QH Q+AAL A+
Sbjct: 18 ILAELDKEKRRLL-QSQSMNSPGANIPLSSRPSLKEVRDSAEQQHIAAQQKAALQHAHVH 76
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR +
Sbjct: 77 SSGFFITQDSSFGNLILPVLPRLE 100
>gi|348513765|ref|XP_003444412.1| PREDICTED: SOSS complex subunit C-like [Oreochromis niloticus]
Length = 102
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 16/84 (19%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMS----------ADQLQH----QRAALITANAQ 53
IL +L+ +++ L+ Q + N+P S S++ A+Q QH Q+AAL A+A
Sbjct: 18 ILAELEKERRRLM-QSQSMNTPGASISLARPSVKDFRDNAEQ-QHIAAQQKAALQHAHAH 75
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR +
Sbjct: 76 SSGFFITQDSSFGNLILPVLPRLE 99
>gi|291382795|ref|XP_002708018.1| PREDICTED: HSPC291-like [Oryctolagus cuniculus]
Length = 104
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGAGIALSRPALSKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|410930698|ref|XP_003978735.1| PREDICTED: SOSS complex subunit C-like [Takifugu rubripes]
Length = 99
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+GF+ITQDSSFGN++LPVLPR +
Sbjct: 62 QKAALQHAHAHSSGFFITQDSSFGNLILPVLPRLE 96
>gi|301614526|ref|XP_002936734.1| PREDICTED: SOSS complex subunit C [Xenopus (Silurana) tropicalis]
Length = 128
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LLL+ + N+P S +++ + QH Q+AAL A+A
Sbjct: 42 ILAELDKEKRKLLLQNQTSTNNPGASIALTRPNMNKDFRDHAEQQHIAAQQKAALQHAHA 101
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPV+PR +A
Sbjct: 102 HSSGYFITQDSAFGNLILPVIPRLEA 127
>gi|348556111|ref|XP_003463866.1| PREDICTED: SOSS complex subunit C-like [Cavia porcellus]
Length = 125
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++ L QH Q+AAL A+A
Sbjct: 39 ILAELDKEKRKLLMQNQSSTNHPGASIALCRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 98
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 99 HSSGYFITQDSAFGNLILPVLPRLD 123
>gi|148237940|ref|NP_001079381.1| SOSS complex subunit C [Xenopus laevis]
gi|82177263|sp|Q8AVV6.1|SOSSC_XENLA RecName: Full=SOSS complex subunit C; AltName: Full=Sensor of
single-strand DNA complex subunit C; AltName:
Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName:
Full=Single-stranded DNA-binding protein-interacting
protein 1; Short=SSB-interacting protein 1
gi|27370879|gb|AAH41246.1| Hspc043-A-prov protein [Xenopus laevis]
Length = 110
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPIS-----NSMSADQLQH---------QRAALITANA 52
IL +L + K++LLL+ ++ N+P S +M+ D H Q+AAL A+A
Sbjct: 24 ILAELDKEKRKLLLQNQSSTNNPGASIALARPNMNKDFRDHSEQQHIAAQQKAALQHAHA 83
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPV+PR +A
Sbjct: 84 HSSGYFITQDSAFGNLILPVIPRLEA 109
>gi|432888058|ref|XP_004075046.1| PREDICTED: SOSS complex subunit C-like [Oryzias latipes]
Length = 102
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 16/82 (19%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMS----------ADQLQH----QRAALITANAQ 53
IL +L+ +++ L+ Q + N+P S S+S A+Q QH Q+AAL A+A
Sbjct: 18 ILAELERERRRLI-QSQSMNTPGASISLSRPSVKDFRDNAEQ-QHIAAQQKAALQHAHAH 75
Query: 54 STGFYITQDSSFGNIVLPVLPR 75
S+GF+ITQDSSFGN++LPV+PR
Sbjct: 76 SSGFFITQDSSFGNLILPVIPR 97
>gi|351713465|gb|EHB16384.1| SOSS complex subunit C [Heterocephalus glaber]
Length = 104
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILTELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAPQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQD +FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDFAFGNLILPVLPRLD 102
>gi|326935345|ref|XP_003213733.1| PREDICTED: SOSS complex subunit C-like [Meleagris gallopavo]
Length = 104
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR +
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLE 102
>gi|189238201|ref|XP_968451.2| PREDICTED: similar to CG9666 CG9666-PA [Tribolium castaneum]
Length = 296
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 10/78 (12%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAP----------NSPPISNSMSADQLQHQRAALITAN 51
EL NRKILEDLQ+KKQLLLKQG A SP I + QRAAL TAN
Sbjct: 11 ELANRKILEDLQLKKQLLLKQGVASTLNSSALPVLGSPNIQQTDGYSMSSLQRAALQTAN 70
Query: 52 AQSTGFYITQDSSFGNIV 69
+QSTG++I+QDSSFGN +
Sbjct: 71 SQSTGYFISQDSSFGNFI 88
>gi|327263669|ref|XP_003216640.1| PREDICTED: SOSS complex subunit C-like [Anolis carolinensis]
Length = 124
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 88 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLDG 123
>gi|148670255|gb|EDL02202.1| RIKEN cDNA 1110054O05, isoform CRA_c [Mus musculus]
Length = 74
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 38 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 72
>gi|391338283|ref|XP_003743489.1| PREDICTED: SOSS complex subunit C-like [Metaseiulus occidentalis]
Length = 81
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 7/74 (9%)
Query: 6 RKILEDLQMKKQLLLKQGAAPNSPP---ISNSMSADQLQHQRAALITANAQSTGFYITQD 62
+KIL++L KKQ LL + P PP ++++MS +Q R AL A S GFYITQ+
Sbjct: 12 QKILDELYQKKQFLLMKNPPPAQPPPQQVNDTMSPNQ----RTALQHAQQTSPGFYITQE 67
Query: 63 SSFGNIVLPVLPRY 76
SS+GN+++PV+PR+
Sbjct: 68 SSYGNLIIPVVPRF 81
>gi|431918465|gb|ELK17689.1| Thymic stromal cotransporter like protein [Pteropus alecto]
Length = 518
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 42 HQRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 481 QQKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 516
>gi|351701497|gb|EHB04416.1| SOSS complex subunit C [Heterocephalus glaber]
Length = 104
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSA--------DQLQHQRAA------LITANA 52
IL +L + K++LL++ ++ N P S ++S D + QR A L A+A
Sbjct: 18 ILAELDKGKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQRIAAQQKAPLQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>gi|427782793|gb|JAA56848.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 104
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
QR AL A++ S GF+I QDSSFGN++LPVLPR+D
Sbjct: 69 QRTALQHAHSSSVGFFIPQDSSFGNLILPVLPRFD 103
>gi|195022596|ref|XP_001985605.1| GH17167 [Drosophila grimshawi]
gi|259511325|sp|B4J184.1|SOSSC_DROGR RecName: Full=SOSS complex subunit C homolog
gi|193899087|gb|EDV97953.1| GH17167 [Drosophila grimshawi]
Length = 115
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
NRKILE++Q KKQLL+ G+ +N M A QL Q
Sbjct: 14 NRKILEEIQTKKQLLIGLGST------TNQMPAPQLLGQPTVTAEFTQGVSVAPNAAGGI 67
Query: 44 ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 68 AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104
>gi|195128125|ref|XP_002008516.1| GI11782 [Drosophila mojavensis]
gi|259511327|sp|B4KZN6.1|SOSSC_DROMO RecName: Full=SOSS complex subunit C homolog
gi|193920125|gb|EDW18992.1| GI11782 [Drosophila mojavensis]
Length = 115
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
NRKILE++Q KKQLL+ G+ +N M A QL Q
Sbjct: 14 NRKILEEIQTKKQLLIGLGS------TANQMPAPQLLGQPTVTAEFVQNVSATPNAAGGI 67
Query: 44 ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 68 AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104
>gi|351695020|gb|EHA97938.1| SOSS complex subunit C [Heterocephalus glaber]
Length = 104
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 20/94 (21%)
Query: 3 LQNRKILEDLQ----MKKQLLLKQGAAPNSPPISNSMS-----------ADQLQH----Q 43
QN+ L+ Q K+ LL + ++ N P S +S ADQ QH Q
Sbjct: 10 FQNKIDLQSWQSWTKKKENLLTQNQSSTNHPGASIMLSRLSLNKDFRDHADQ-QHIAAQQ 68
Query: 44 RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
+AAL A+A S+G++ITQDS+FGN++LPVLP D
Sbjct: 69 KAALQHAHAHSSGYFITQDSAFGNLILPVLPHLD 102
>gi|427778371|gb|JAA54637.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 127
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
QR AL A++ S GF+I QDSSFGN++LPVLPR+D
Sbjct: 92 QRTALQHAHSSSVGFFIPQDSSFGNLILPVLPRFD 126
>gi|156396462|ref|XP_001637412.1| predicted protein [Nematostella vectensis]
gi|259511332|sp|A7RTB3.1|SOSSC_NEMVE RecName: Full=SOSS complex subunit C homolog
gi|156224524|gb|EDO45349.1| predicted protein [Nematostella vectensis]
Length = 114
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 2 ELQNRKILEDLQMKKQLLLKQ------------GAAPNSPPISNSMSADQLQH------- 42
E++NRKIL+ L+ KK+ ++ Q P + + SA ++
Sbjct: 10 EVRNRKILQGLEEKKRQMMNQQQGGGAGPLPGPSHVARPPTDAGNTSASRIHEPIVRYPN 69
Query: 43 --------QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
QR AL A++ S GFYITQDS +GN++LPV+PR ++
Sbjct: 70 QTHQLAISQRQALEHAHSVSPGFYITQDSMYGNLILPVIPRVES 113
>gi|347963307|ref|XP_003436928.1| AGAP013407-PA [Anopheles gambiae str. PEST]
gi|333467262|gb|EGK96518.1| AGAP013407-PA [Anopheles gambiae str. PEST]
Length = 125
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 31/102 (30%)
Query: 6 RKILEDLQMKKQLLLKQGAAPNSPPISNSMSAD-------------QLQHQRAALITANA 52
+KILED+QMKKQLL K G +SP N ++ QL A T
Sbjct: 13 KKILEDIQMKKQLLQK-GVNSHSPGFGNLYNSSLGFGSLYTPSPLFQLPKHTPATATGQP 71
Query: 53 -----------------QSTGFYITQDSSFGNIVLPVLPRYD 77
QS GF++ QDS FGN +LPVLPRYD
Sbjct: 72 NDSNQSISKGVWSQAINQSFGFFVPQDSLFGNNILPVLPRYD 113
>gi|195352339|ref|XP_002042670.1| GM15016 [Drosophila sechellia]
gi|259511330|sp|B4IG10.1|SOSSC_DROSE RecName: Full=SOSS complex subunit C homolog
gi|194124554|gb|EDW46597.1| GM15016 [Drosophila sechellia]
Length = 126
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 29/98 (29%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPN---SPPISNSMSADQLQHQRAAL---------ITANA 52
NRKILE++Q KKQLL G N SPP N M A QL Q + I NA
Sbjct: 14 NRKILEEIQTKKQLL--AGGIINLGLSPP--NQMPAPQLLGQPTTVNPDFQAGVGIATNA 69
Query: 53 QST-------------GFYITQDSSFGNIVLPVLPRYD 77
ST GF+I QDS FGN +PVLPR +
Sbjct: 70 TSTTRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>gi|221512922|ref|NP_001137972.1| CG42374 [Drosophila melanogaster]
gi|195591469|ref|XP_002085463.1| GD14793 [Drosophila simulans]
gi|259511326|sp|B7Z073.1|SOSSC_DROME RecName: Full=SOSS complex subunit C homolog
gi|259511331|sp|B4QQE2.1|SOSSC_DROSI RecName: Full=SOSS complex subunit C homolog
gi|194197472|gb|EDX11048.1| GD14793 [Drosophila simulans]
gi|220902646|gb|ACL83327.1| CG42374 [Drosophila melanogaster]
gi|349732328|gb|AEQ05554.1| LD25448p1 [Drosophila melanogaster]
Length = 129
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 29/98 (29%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPN---SPPISNSMSADQLQHQRAAL---------ITANA 52
NRKILE++Q KKQLL G N SPP N M A QL Q + I NA
Sbjct: 14 NRKILEEIQTKKQLL--AGGIINLGLSPP--NQMPAPQLLGQPTTVNPDFQAGVGIATNA 69
Query: 53 QST-------------GFYITQDSSFGNIVLPVLPRYD 77
ST GF+I QDS FGN +PVLPR +
Sbjct: 70 TSTARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>gi|242021685|ref|XP_002431274.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516531|gb|EEB18536.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 316
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 18/89 (20%)
Query: 4 QNRKILEDLQMKKQLLLKQGAAPN------SPPI------SNSMSADQLQHQRAA----- 46
Q +KILE+L ++KQLL K G A S PI SN S +Q RAA
Sbjct: 19 QQKKILEELNLRKQLL-KSGTAQTLNPSALSSPIGVSSINSNQTSENQSNLARAAHANSL 77
Query: 47 LITANAQSTGFYITQDSSFGNIVLPVLPR 75
L AN+ S G++I Q+SSFGN +L V PR
Sbjct: 78 LQHANSTSFGYFIPQESSFGNNILAVFPR 106
>gi|194873977|ref|XP_001973316.1| GG16026 [Drosophila erecta]
gi|259511324|sp|B3NDY8.1|SOSSC_DROER RecName: Full=SOSS complex subunit C homolog
gi|190655099|gb|EDV52342.1| GG16026 [Drosophila erecta]
Length = 129
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 31/99 (31%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQRAAL---------ITAN 51
NRKILE++Q KKQLL + G +P +N M A QL Q + I N
Sbjct: 14 NRKILEEIQTKKQLLAGGIINLGLSP-----ANQMPAPQLLGQPTTVNPDFQAGVGIATN 68
Query: 52 AQST-------------GFYITQDSSFGNIVLPVLPRYD 77
A ST GF+I QDS FGN +PVLPR +
Sbjct: 69 ATSTARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>gi|195435586|ref|XP_002065761.1| GK20175 [Drosophila willistoni]
gi|259511322|sp|B4MXH8.1|SOSCB_DROWI RecName: Full=SOSS complex subunit C homolog B
gi|194161846|gb|EDW76747.1| GK20175 [Drosophila willistoni]
Length = 125
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 5 NRKILEDLQMKKQLL-----------LKQGAAPN--SPPISNSMSADQLQHQ----RAAL 47
NRKILE++Q KKQLL Q AP P + + + D + RAA
Sbjct: 14 NRKILEEIQTKKQLLAGGIINLGLSNTNQMPAPQLLGQPTTTTATPDLVSTNSTPPRAAF 73
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
++ + GF+I QDS FGN ++PVLPR +
Sbjct: 74 NPTSSTTLGFFIPQDSYFGNSLIPVLPRLE 103
>gi|195477444|ref|XP_002086341.1| GE23078 [Drosophila yakuba]
gi|195496305|ref|XP_002095637.1| GE19595 [Drosophila yakuba]
gi|194181738|gb|EDW95349.1| GE19595 [Drosophila yakuba]
gi|194186131|gb|EDW99742.1| GE23078 [Drosophila yakuba]
Length = 130
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 22/95 (23%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL---------QHQRAALITANAQST 55
NRKILE++Q KKQLL P + M A QL Q I +NA ST
Sbjct: 14 NRKILEEIQTKKQLLAGGIINLGLSPANQQMPAPQLLGQPTTVNPDFQTGVGIASNATST 73
Query: 56 -------------GFYITQDSSFGNIVLPVLPRYD 77
GF+I QDS FGN +PVLPR +
Sbjct: 74 ARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 108
>gi|195173210|ref|XP_002027386.1| GL20926 [Drosophila persimilis]
gi|198463756|ref|XP_002135571.1| GA28629 [Drosophila pseudoobscura pseudoobscura]
gi|259511328|sp|B4H957.1|SOSSC_DROPE RecName: Full=SOSS complex subunit C homolog
gi|259511329|sp|B5DRT7.1|SOSSC_DROPS RecName: Full=SOSS complex subunit C homolog
gi|194113238|gb|EDW35281.1| GL20926 [Drosophila persimilis]
gi|198151398|gb|EDY74198.1| GA28629 [Drosophila pseudoobscura pseudoobscura]
Length = 125
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 30/98 (30%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
NRKILED+Q KKQLL + G + +N M + QL Q
Sbjct: 14 NRKILEDIQTKKQLLAGGIINLGLS-----NTNQMPSPQLLGQPTVAPEFLPQGVGLPTN 68
Query: 44 ----RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 69 ATPPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 106
>gi|194751670|ref|XP_001958148.1| GF23665 [Drosophila ananassae]
gi|259511323|sp|B3M7M6.1|SOSSC_DROAN RecName: Full=SOSS complex subunit C homolog
gi|190625430|gb|EDV40954.1| GF23665 [Drosophila ananassae]
Length = 123
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 34/100 (34%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
RKILE++Q KKQLL + G I+ MS QL Q
Sbjct: 14 TRKILEEIQTKKQLLAGGIINLG-------INTQMSTPQLLGQPTTVTPDFQLGVGGVAA 66
Query: 44 ------RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
RAA ++ + GF++ QDS FGN LPVLPR +
Sbjct: 67 NATPTARAAFNPTSSTTLGFFVPQDSYFGNSFLPVLPRLE 106
>gi|157130331|ref|XP_001655665.1| hypothetical protein AaeL_AAEL011749 [Aedes aegypti]
gi|108871917|gb|EAT36142.1| AAEL011749-PA [Aedes aegypti]
Length = 305
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 22/88 (25%)
Query: 6 RKILEDLQMKKQLLLKQGAAPNSPPISNS----------MSADQLQHQRAALITANA--- 52
+KILED+Q+KKQLL K G +P +P IS + + Q Q + T NA
Sbjct: 14 KKILEDIQIKKQLLQK-GVSPVTPNISATPAGLTIPQYVQATSQAQSNQPVESTINATTK 72
Query: 53 --------QSTGFYITQDSSFGNIVLPV 72
QS GF+I QDS FGN ++P+
Sbjct: 73 AVYNQALSQSYGFFIPQDSLFGNNIIPL 100
>gi|195419113|ref|XP_002060664.1| GK21300 [Drosophila willistoni]
gi|259511321|sp|B4MHR1.1|SOSCA_DROWI RecName: Full=SOSS complex subunit C homolog A
gi|194156749|gb|EDW71650.1| GK21300 [Drosophila willistoni]
Length = 125
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 27/95 (28%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
N K LE++ +KQLL + G + +N M A QL Q
Sbjct: 14 NSKSLEEIHTRKQLLAGGIMNLGLS-----NTNQMPAPQLLGQPSTTTATPDLVSTNSTP 68
Query: 44 -RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
RAA +++ + GF+I QDS FGN ++PVLPR +
Sbjct: 69 PRAAFNPSSSTTLGFFIPQDSYFGNSLIPVLPRLE 103
>gi|196010926|ref|XP_002115327.1| hypothetical protein TRIADDRAFT_59399 [Trichoplax adhaerens]
gi|190582098|gb|EDV22172.1| hypothetical protein TRIADDRAFT_59399 [Trichoplax adhaerens]
Length = 132
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 26 PNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPRY 76
P +P SN + LQH R + G+YI QDS FGN++LPVLP +
Sbjct: 89 PPAPASSNDQISLALQHARTT-------TPGYYIGQDSKFGNLILPVLPEF 132
>gi|393910364|gb|EFO17551.2| hypothetical protein LOAG_10948 [Loa loa]
Length = 84
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ---RAALITAN--AQSTG 56
E NRK+LE+L +QL++K A S S+++D + + R + N +Q++
Sbjct: 7 EDNNRKLLEELNRTRQLMMKNSGA-----SSRSLASDSIAPRCDPRTVQLVNNLESQTSI 61
Query: 57 FYITQDSSFGNIVLPVLPR 75
+I +S + N +LPV PR
Sbjct: 62 TFIPTNSQYNNTILPVFPR 80
>gi|312090180|ref|XP_003146519.1| hypothetical protein LOAG_10948 [Loa loa]
Length = 109
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ---RAALITAN--AQSTG 56
E NRK+LE+L +QL++K A S S+++D + + R + N +Q++
Sbjct: 32 EDNNRKLLEELNRTRQLMMKNSGAS-----SRSLASDSIAPRCDPRTVQLVNNLESQTSI 86
Query: 57 FYITQDSSFGNIVLPVLPR 75
+I +S + N +LPV PR
Sbjct: 87 TFIPTNSQYNNTILPVFPR 105
>gi|395849747|ref|XP_003797477.1| PREDICTED: SOSS complex subunit C-like [Otolemur garnettii]
Length = 105
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 16/82 (19%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSP---------PISNSMSADQLQHQR------AALITAN 51
IL +L + K++ L++ ++PN P P S DQ + Q AAL A+
Sbjct: 18 ILAELDKAKRKSLMQNQSSPNHPGASMAIPRSPYSEHGLGDQAKQQHRAAQQTAALQQAH 77
Query: 52 AQSTGFYITQDSSFGNIVLPVL 73
A S+G++ TQDS+FGN++LPVL
Sbjct: 78 AHSSGYFATQDSAFGNLILPVL 99
>gi|390340823|ref|XP_780846.2| PREDICTED: SOSS complex subunit C-like [Strongylocentrotus
purpuratus]
Length = 135
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 20/80 (25%)
Query: 8 ILEDLQMKKQLLLK--QGAAPNSP---------------PISNSMSADQLQHQRAALITA 50
ILEDLQ KK+ + Q P P MSA++ Q+ AL A
Sbjct: 48 ILEDLQEKKKRMSARMQSTGPGGGATMQMKDNGMGLMRDPQEAQMSANK---QQQALQHA 104
Query: 51 NAQSTGFYITQDSSFGNIVL 70
+ S+ ++ITQDSSFGN++L
Sbjct: 105 HTNSSAYFITQDSSFGNLIL 124
>gi|402592004|gb|EJW85933.1| hypothetical protein WUBG_03158 [Wuchereria bancrofti]
Length = 85
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 ELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQ 61
E NRK+LE+L +QL++K A N S+S++ + +Q++ +I
Sbjct: 9 EDNNRKLLEELNRTRQLMMKNSGASNRSLASDSITPRCDPRTVQLVNNLESQTSITFIPT 68
Query: 62 DSSFGNIVLPVLPR 75
+S + NI LPV PR
Sbjct: 69 NSQYNNI-LPVFPR 81
>gi|297685144|ref|XP_002820160.1| PREDICTED: SOSS complex subunit C [Pongo abelii]
Length = 101
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 60 TQDSSFGNIVLPVLPRYD 77
TQDS+FGN++LPVLPR D
Sbjct: 82 TQDSAFGNLILPVLPRLD 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,079,810,842
Number of Sequences: 23463169
Number of extensions: 30803854
Number of successful extensions: 90183
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 90074
Number of HSP's gapped (non-prelim): 85
length of query: 78
length of database: 8,064,228,071
effective HSP length: 49
effective length of query: 29
effective length of database: 6,914,532,790
effective search space: 200521450910
effective search space used: 200521450910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)