BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4784
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZJ32|SOSSC_CHICK SOSS complex subunit C OS=Gallus gallus GN=INIP PE=3 SV=1
Length = 103
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 14/85 (16%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
IL +LQ K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 18 ILAELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAH 77
Query: 54 STGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78 SSGYFITQDSAFGNLILPVLPRLEA 102
>sp|Q7ZV26|SOSSC_DANRE SOSS complex subunit C OS=Danio rerio GN=inip PE=3 SV=1
Length = 103
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 13/83 (15%)
Query: 8 ILEDLQMKKQLLLKQ------GAA-PNSPPISNSMSADQL--QH----QRAALITANAQS 54
IL +L +K+ L++ GA+ P S P N DQ QH Q+AAL A+A S
Sbjct: 18 ILAELDKEKRRLIQSQTLNNPGASIPLSRPAVNKEFRDQAEQQHIAAQQKAALQHAHAHS 77
Query: 55 TGFYITQDSSFGNIVLPVLPRYD 77
+GF+ITQDSSFGN++LPVLPR D
Sbjct: 78 SGFFITQDSSFGNLILPVLPRLD 100
>sp|Q9NRY2|SOSSC_HUMAN SOSS complex subunit C OS=Homo sapiens GN=INIP PE=1 SV=1
Length = 104
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>sp|Q2NKT2|SOSSC_BOVIN SOSS complex subunit C OS=Bos taurus GN=INIP PE=3 SV=1
Length = 104
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S ++S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALSRPALNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>sp|Q3TXT3|SOSSC_MOUSE SOSS complex subunit C OS=Mus musculus GN=Inip PE=2 SV=1
Length = 104
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
IL +L +K+ LL Q + S P ++ S++ D H Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTSHPGASISLSRPSLTKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYD 77
S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLD 102
>sp|B9EQ30|SOSSC_SALSA SOSS complex subunit C OS=Salmo salar GN=inip PE=3 SV=1
Length = 107
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 15/84 (17%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
IL +L +K+ L+ Q ++ N+P S +S L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRRLI-QNSSMNNPGASIPLSRPALNKDFRDHAEQQHIAAQQKAALQHAHAH 76
Query: 54 STGFYITQDSSFGNIVLPVLPRYD 77
S+GF+ITQDSSFGN++LPVLPR D
Sbjct: 77 SSGFFITQDSSFGNLILPVLPRLD 100
>sp|B5KFM4|SOSSC_TAEGU SOSS complex subunit C OS=Taeniopygia guttata GN=INIP PE=3 SV=1
Length = 104
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
IL +L + K++LL++ ++ N P S +++ L QH Q+AAL A+A
Sbjct: 18 ILAELDKEKRKLLMQNQSSTNHPGASIALTRSPLNKDFRDHAEQQHIAAQQKAALQHAHA 77
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78 HSSGYFITQDSAFGNLILPVLPRLEA 103
>sp|Q8AVV6|SOSSC_XENLA SOSS complex subunit C OS=Xenopus laevis GN=inip PE=3 SV=1
Length = 110
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)
Query: 8 ILEDL-QMKKQLLLKQGAAPNSPPIS-----NSMSADQLQH---------QRAALITANA 52
IL +L + K++LLL+ ++ N+P S +M+ D H Q+AAL A+A
Sbjct: 24 ILAELDKEKRKLLLQNQSSTNNPGASIALARPNMNKDFRDHSEQQHIAAQQKAALQHAHA 83
Query: 53 QSTGFYITQDSSFGNIVLPVLPRYDA 78
S+G++ITQDS+FGN++LPV+PR +A
Sbjct: 84 HSSGYFITQDSAFGNLILPVIPRLEA 109
>sp|B4J184|SOSSC_DROGR SOSS complex subunit C homolog OS=Drosophila grimshawi GN=GH17167
PE=3 SV=1
Length = 115
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
NRKILE++Q KKQLL+ G+ +N M A QL Q
Sbjct: 14 NRKILEEIQTKKQLLIGLGST------TNQMPAPQLLGQPTVTAEFTQGVSVAPNAAGGI 67
Query: 44 ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 68 AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104
>sp|B4KZN6|SOSSC_DROMO SOSS complex subunit C homolog OS=Drosophila mojavensis GN=GI11782
PE=3 SV=1
Length = 115
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
NRKILE++Q KKQLL+ G+ +N M A QL Q
Sbjct: 14 NRKILEEIQTKKQLLIGLGS------TANQMPAPQLLGQPTVTAEFVQNVSATPNAAGGI 67
Query: 44 ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 68 AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104
>sp|A7RTB3|SOSSC_NEMVE SOSS complex subunit C homolog OS=Nematostella vectensis
GN=v1g201834 PE=3 SV=1
Length = 114
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 2 ELQNRKILEDLQMKKQLLLKQ------------GAAPNSPPISNSMSADQLQH------- 42
E++NRKIL+ L+ KK+ ++ Q P + + SA ++
Sbjct: 10 EVRNRKILQGLEEKKRQMMNQQQGGGAGPLPGPSHVARPPTDAGNTSASRIHEPIVRYPN 69
Query: 43 --------QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
QR AL A++ S GFYITQDS +GN++LPV+PR ++
Sbjct: 70 QTHQLAISQRQALEHAHSVSPGFYITQDSMYGNLILPVIPRVES 113
>sp|B4IG10|SOSSC_DROSE SOSS complex subunit C homolog OS=Drosophila sechellia GN=GM15016
PE=3 SV=1
Length = 126
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 29/98 (29%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPN---SPPISNSMSADQLQHQRAAL---------ITANA 52
NRKILE++Q KKQLL G N SPP N M A QL Q + I NA
Sbjct: 14 NRKILEEIQTKKQLL--AGGIINLGLSPP--NQMPAPQLLGQPTTVNPDFQAGVGIATNA 69
Query: 53 QST-------------GFYITQDSSFGNIVLPVLPRYD 77
ST GF+I QDS FGN +PVLPR +
Sbjct: 70 TSTTRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>sp|B4QQE2|SOSSC_DROSI SOSS complex subunit C homolog OS=Drosophila simulans GN=GD14793
PE=3 SV=1
Length = 129
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 29/98 (29%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPN---SPPISNSMSADQLQHQRAAL---------ITANA 52
NRKILE++Q KKQLL G N SPP N M A QL Q + I NA
Sbjct: 14 NRKILEEIQTKKQLL--AGGIINLGLSPP--NQMPAPQLLGQPTTVNPDFQAGVGIATNA 69
Query: 53 QST-------------GFYITQDSSFGNIVLPVLPRYD 77
ST GF+I QDS FGN +PVLPR +
Sbjct: 70 TSTARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>sp|B7Z073|SOSSC_DROME SOSS complex subunit C homolog OS=Drosophila melanogaster
GN=CG42374 PE=3 SV=1
Length = 129
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 29/98 (29%)
Query: 5 NRKILEDLQMKKQLLLKQGAAPN---SPPISNSMSADQLQHQRAAL---------ITANA 52
NRKILE++Q KKQLL G N SPP N M A QL Q + I NA
Sbjct: 14 NRKILEEIQTKKQLL--AGGIINLGLSPP--NQMPAPQLLGQPTTVNPDFQAGVGIATNA 69
Query: 53 QST-------------GFYITQDSSFGNIVLPVLPRYD 77
ST GF+I QDS FGN +PVLPR +
Sbjct: 70 TSTARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>sp|B3NDY8|SOSSC_DROER SOSS complex subunit C homolog OS=Drosophila erecta GN=GG16026 PE=3
SV=1
Length = 129
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 31/99 (31%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQRAAL---------ITAN 51
NRKILE++Q KKQLL + G +P +N M A QL Q + I N
Sbjct: 14 NRKILEEIQTKKQLLAGGIINLGLSP-----ANQMPAPQLLGQPTTVNPDFQAGVGIATN 68
Query: 52 AQST-------------GFYITQDSSFGNIVLPVLPRYD 77
A ST GF+I QDS FGN +PVLPR +
Sbjct: 69 ATSTARSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 107
>sp|B4MXH8|SOSCB_DROWI SOSS complex subunit C homolog B OS=Drosophila willistoni
GN=GK20175 PE=3 SV=1
Length = 125
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 5 NRKILEDLQMKKQLL-----------LKQGAAPN--SPPISNSMSADQLQHQ----RAAL 47
NRKILE++Q KKQLL Q AP P + + + D + RAA
Sbjct: 14 NRKILEEIQTKKQLLAGGIINLGLSNTNQMPAPQLLGQPTTTTATPDLVSTNSTPPRAAF 73
Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
++ + GF+I QDS FGN ++PVLPR +
Sbjct: 74 NPTSSTTLGFFIPQDSYFGNSLIPVLPRLE 103
>sp|B5DRT7|SOSSC_DROPS SOSS complex subunit C homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA28629 PE=3 SV=1
Length = 125
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 30/98 (30%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
NRKILED+Q KKQLL + G + +N M + QL Q
Sbjct: 14 NRKILEDIQTKKQLLAGGIINLGLS-----NTNQMPSPQLLGQPTVAPEFLPQGVGLPTN 68
Query: 44 ----RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 69 ATPPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 106
>sp|B4H957|SOSSC_DROPE SOSS complex subunit C homolog OS=Drosophila persimilis GN=GL20926
PE=3 SV=1
Length = 125
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 30/98 (30%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
NRKILED+Q KKQLL + G + +N M + QL Q
Sbjct: 14 NRKILEDIQTKKQLLAGGIINLGLS-----NTNQMPSPQLLGQPTVAPEFLPQGVGLPTN 68
Query: 44 ----RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
R+A ++ + GF+I QDS FGN +PVLPR +
Sbjct: 69 ATPPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 106
>sp|B3M7M6|SOSSC_DROAN SOSS complex subunit C homolog OS=Drosophila ananassae GN=GF23665
PE=3 SV=1
Length = 123
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 34/100 (34%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
RKILE++Q KKQLL + G I+ MS QL Q
Sbjct: 14 TRKILEEIQTKKQLLAGGIINLG-------INTQMSTPQLLGQPTTVTPDFQLGVGGVAA 66
Query: 44 ------RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
RAA ++ + GF++ QDS FGN LPVLPR +
Sbjct: 67 NATPTARAAFNPTSSTTLGFFVPQDSYFGNSFLPVLPRLE 106
>sp|B4MHR1|SOSCA_DROWI SOSS complex subunit C homolog A OS=Drosophila willistoni
GN=GK21300 PE=3 SV=1
Length = 125
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 27/95 (28%)
Query: 5 NRKILEDLQMKKQLL----LKQGAAPNSPPISNSMSADQLQHQ----------------- 43
N K LE++ +KQLL + G + +N M A QL Q
Sbjct: 14 NSKSLEEIHTRKQLLAGGIMNLGLS-----NTNQMPAPQLLGQPSTTTATPDLVSTNSTP 68
Query: 44 -RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
RAA +++ + GF+I QDS FGN ++PVLPR +
Sbjct: 69 PRAAFNPSSSTTLGFFIPQDSYFGNSLIPVLPRLE 103
>sp|Q24MV8|Y4845_DESHY UPF0042 nucleotide-binding protein DSY4845 OS=Desulfitobacterium
hafniense (strain Y51) GN=DSY4845 PE=3 SV=1
Length = 297
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFG 66
ILE +QM++Q+L + + ++++S+ QL+HQ A N Q++G SFG
Sbjct: 119 ILEGIQMERQMLTELRGVAHKIMDTSNLSSQQLRHQVAESF-GNEQASGHLAVSVVSFG 176
>sp|B8FYW5|Y4722_DESHD UPF0042 nucleotide-binding protein Dhaf_4722 OS=Desulfitobacterium
hafniense (strain DCB-2 / DSM 10664) GN=Dhaf_4722 PE=3
SV=1
Length = 297
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFG 66
ILE +QM++Q+L + + ++++S+ QL+HQ A N Q++G SFG
Sbjct: 119 ILEGIQMERQMLTELRGVAHKIMDTSNLSSQQLRHQVAESF-GNEQASGHLAVSVVSFG 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,377,267
Number of Sequences: 539616
Number of extensions: 715575
Number of successful extensions: 2057
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2024
Number of HSP's gapped (non-prelim): 27
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)