Your job contains 1 sequence.
>psy4784
MELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYIT
QDSSFGNIVLPVLPRYDA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4784
(78 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-961 - symbol:inip "ints3 and nabp in... 140 1.1e-09 1
UNIPROTKB|B9EQ30 - symbol:inip "SOSS complex subunit C" s... 135 3.6e-09 1
UNIPROTKB|Q5ZJ32 - symbol:INIP "SOSS complex subunit C" s... 131 9.7e-09 1
UNIPROTKB|F1NAD7 - symbol:INIP "SOSS complex subunit C" s... 130 1.2e-08 1
UNIPROTKB|B5KFM4 - symbol:INIP "SOSS complex subunit C" s... 130 1.2e-08 1
UNIPROTKB|Q2NKT2 - symbol:INIP "SOSS complex subunit C" s... 124 5.3e-08 1
UNIPROTKB|F1Q3P8 - symbol:INIP "Uncharacterized protein" ... 124 5.3e-08 1
UNIPROTKB|Q9NRY2 - symbol:INIP "SOSS complex subunit C" s... 124 5.3e-08 1
UNIPROTKB|F1SNA6 - symbol:INIP "Uncharacterized protein" ... 124 5.3e-08 1
MGI|MGI:1913459 - symbol:Inip "INTS3 and NABP interacting... 124 5.3e-08 1
RGD|1307983 - symbol:Inip "INTS3 and NABP interacting pro... 124 5.3e-08 1
UNIPROTKB|Q8AVV6 - symbol:inip "SOSS complex subunit C" s... 122 8.7e-08 1
>ZFIN|ZDB-GENE-040426-961 [details] [associations]
symbol:inip "ints3 and nabp interacting protein"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0070876
"SOSS complex" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
ZFIN:ZDB-GENE-040426-961 GO:GO:0006281 GO:GO:0010212 GO:GO:0070876
CTD:58493 eggNOG:NOG27399 GeneTree:ENSGT00390000006366
HOGENOM:HOG000007001 OMA:LKQNRKM OrthoDB:EOG4GXFP9 EMBL:BC046030
EMBL:BC071348 IPI:IPI00512060 RefSeq:NP_956513.1 UniGene:Dr.85121
STRING:Q7ZV26 PRIDE:Q7ZV26 Ensembl:ENSDART00000039145 GeneID:393188
KEGG:dre:393188 InParanoid:Q7ZV26 NextBio:20814255 Bgee:Q7ZV26
Uniprot:Q7ZV26
Length = 103
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/62 (56%), Positives = 42/62 (67%)
Query: 23 GAA-PNSPPISNSMSADQL--QH----QRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
GA+ P S P N DQ QH Q+AAL A+A S+GF+ITQDSSFGN++LPVLPR
Sbjct: 39 GASIPLSRPAVNKEFRDQAEQQHIAAQQKAALQHAHAHSSGFFITQDSSFGNLILPVLPR 98
Query: 76 YD 77
D
Sbjct: 99 LD 100
>UNIPROTKB|B9EQ30 [details] [associations]
symbol:inip "SOSS complex subunit C" species:8030 "Salmo
salar" [GO:0005634 "nucleus" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
GO:GO:0006281 GO:GO:0010212 GO:GO:0070876 CTD:58493 EMBL:BT057755
RefSeq:NP_001140092.1 UniGene:Ssa.8845 GeneID:100286680
Uniprot:B9EQ30
Length = 107
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 34/62 (54%), Positives = 42/62 (67%)
Query: 23 GAA-PNSPPISNSMSAD--QLQH----QRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
GA+ P S P N D + QH Q+AAL A+A S+GF+ITQDSSFGN++LPVLPR
Sbjct: 39 GASIPLSRPALNKDFRDHAEQQHIAAQQKAALQHAHAHSSGFFITQDSSFGNLILPVLPR 98
Query: 76 YD 77
D
Sbjct: 99 LD 100
>UNIPROTKB|Q5ZJ32 [details] [associations]
symbol:INIP "SOSS complex subunit C" species:9031 "Gallus
gallus" [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0070876 "SOSS complex" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] GO:GO:0006281
GO:GO:0010212 GO:GO:0070876 CTD:58493 eggNOG:NOG27399
HOGENOM:HOG000007001 OrthoDB:EOG4GXFP9 EMBL:AJ720602
IPI:IPI00598924 RefSeq:NP_001006585.1 UniGene:Gga.8432
STRING:Q5ZJ32 GeneID:427331 KEGG:gga:427331 InParanoid:Q5ZJ32
NextBio:20828608 Uniprot:Q5ZJ32
Length = 103
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 2 ELQN-RKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
ELQ RK+L A SP + + QH Q+AAL A+A S+G
Sbjct: 21 ELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 80
Query: 57 FYITQDSSFGNIVLPVLPRYDA 78
++ITQDS+FGN++LPVLPR +A
Sbjct: 81 YFITQDSAFGNLILPVLPRLEA 102
>UNIPROTKB|F1NAD7 [details] [associations]
symbol:INIP "SOSS complex subunit C" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0070876 "SOSS
complex" evidence=IEA] GO:GO:0006281 GO:GO:0010212 GO:GO:0070876
GeneTree:ENSGT00390000006366 OMA:LKQNRKM IPI:IPI00598924
EMBL:AADN02057698 EMBL:AADN02057699 EMBL:AADN02057700
Ensembl:ENSGALT00000032779 Uniprot:F1NAD7
Length = 104
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 1 MELQNRKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
++ + RK+L A SP + + QH Q+AAL A+A S+G
Sbjct: 22 LDKEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 81
Query: 57 FYITQDSSFGNIVLPVLPRYDA 78
++ITQDS+FGN++LPVLPR +A
Sbjct: 82 YFITQDSAFGNLILPVLPRLEA 103
>UNIPROTKB|B5KFM4 [details] [associations]
symbol:INIP "SOSS complex subunit C" species:59729
"Taeniopygia guttata" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
GO:GO:0006281 GO:GO:0010212 GO:GO:0070876 CTD:58493 eggNOG:NOG27399
GeneTree:ENSGT00390000006366 HOGENOM:HOG000007001 OMA:LKQNRKM
OrthoDB:EOG4GXFP9 EMBL:EF191823 EMBL:DQ216884 RefSeq:NP_001184184.1
UniGene:Tgu.7293 STRING:B5KFM4 Ensembl:ENSTGUT00000001298
GeneID:100190500 KEGG:tgu:100190500 Uniprot:B5KFM4
Length = 104
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 1 MELQNRKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
++ + RK+L A SP + + QH Q+AAL A+A S+G
Sbjct: 22 LDKEKRKLLMQNQSSTNHPGASIALTRSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 81
Query: 57 FYITQDSSFGNIVLPVLPRYDA 78
++ITQDS+FGN++LPVLPR +A
Sbjct: 82 YFITQDSAFGNLILPVLPRLEA 103
>UNIPROTKB|Q2NKT2 [details] [associations]
symbol:INIP "SOSS complex subunit C" species:9913 "Bos
taurus" [GO:0006281 "DNA repair" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
GO:GO:0006281 GO:GO:0010212 GO:GO:0070876 EMBL:BC111656
IPI:IPI00717318 RefSeq:NP_001071532.1 UniGene:Bt.64863
STRING:Q2NKT2 Ensembl:ENSBTAT00000025666 GeneID:616784
KEGG:bta:616784 CTD:58493 eggNOG:NOG27399
GeneTree:ENSGT00390000006366 HOGENOM:HOG000007001 InParanoid:Q2NKT2
OMA:LKQNRKM OrthoDB:EOG4GXFP9 NextBio:20900315 Uniprot:Q2NKT2
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>UNIPROTKB|F1Q3P8 [details] [associations]
symbol:INIP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070876 "SOSS complex" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] GO:GO:0006281 GO:GO:0010212
GO:GO:0070876 GeneTree:ENSGT00390000006366 OMA:LKQNRKM
EMBL:AAEX03008073 Ensembl:ENSCAFT00000004907 Uniprot:F1Q3P8
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>UNIPROTKB|Q9NRY2 [details] [associations]
symbol:INIP "SOSS complex subunit C" species:9606 "Homo
sapiens" [GO:0010212 "response to ionizing radiation" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0070876 "SOSS complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0006281 GO:GO:0010212 GO:GO:0070876
EMBL:AL390067 CTD:58493 eggNOG:NOG27399 HOGENOM:HOG000007001
OMA:LKQNRKM OrthoDB:EOG4GXFP9 EMBL:AF161409 EMBL:AF161411
EMBL:BC013097 EMBL:BC014881 EMBL:BC065210 IPI:IPI00000330
IPI:IPI00829819 RefSeq:NP_067041.1 UniGene:Hs.658575
ProteinModelPortal:Q9NRY2 STRING:Q9NRY2 PhosphoSite:Q9NRY2
PaxDb:Q9NRY2 PRIDE:Q9NRY2 DNASU:58493 Ensembl:ENST00000374236
Ensembl:ENST00000374242 GeneID:58493 KEGG:hsa:58493 UCSC:uc004bgg.3
GeneCards:GC09M115449 HGNC:HGNC:24994 HPA:HPA020382 MIM:613273
neXtProt:NX_Q9NRY2 PharmGKB:PA134992982 InParanoid:Q9NRY2
GenomeRNAi:58493 NextBio:64976 ArrayExpress:Q9NRY2 Bgee:Q9NRY2
CleanEx:HS_C9orf80 Genevestigator:Q9NRY2 Uniprot:Q9NRY2
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>UNIPROTKB|F1SNA6 [details] [associations]
symbol:INIP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] GO:GO:0006281 GO:GO:0010212 GO:GO:0070876
GeneTree:ENSGT00390000006366 OMA:LKQNRKM EMBL:CU633609
RefSeq:NP_001231815.1 UniGene:Ssc.26394 Ensembl:ENSSSCT00000028959
GeneID:100513906 KEGG:ssc:100513906 CTD:100388987 Uniprot:F1SNA6
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>MGI|MGI:1913459 [details] [associations]
symbol:Inip "INTS3 and NABP interacting protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0070876 "SOSS complex" evidence=ISO]
MGI:MGI:1913459 GO:GO:0006281 EMBL:CH466565 GO:GO:0010212
EMBL:AL806512 GO:GO:0070876 CTD:58493 eggNOG:NOG27399
GeneTree:ENSGT00390000006366 HOGENOM:HOG000007001 OMA:LKQNRKM
EMBL:AK004256 EMBL:AK159116 EMBL:AK169537 EMBL:BC116204
EMBL:BC116205 IPI:IPI00341612 IPI:IPI00649151 RefSeq:NP_001013595.1
UniGene:Mm.443220 UniGene:Mm.51988 STRING:Q3TXT3 PhosphoSite:Q3TXT3
PaxDb:Q3TXT3 PRIDE:Q3TXT3 Ensembl:ENSMUST00000095063
Ensembl:ENSMUST00000107526 Ensembl:ENSMUST00000143756 GeneID:66209
KEGG:mmu:66209 UCSC:uc008tac.1 InParanoid:B1AX82 NextBio:320971
Bgee:Q3TXT3 CleanEx:MM_1110054O05RIK Genevestigator:Q3TXT3
Uniprot:Q3TXT3
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>RGD|1307983 [details] [associations]
symbol:Inip "INTS3 and NABP interacting protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006281
"DNA repair" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0010212 "response to ionizing
radiation" evidence=IEA;ISO] [GO:0070876 "SOSS complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1307983
GO:GO:0006281 GO:GO:0010212 GO:GO:0070876 CTD:58493
GeneTree:ENSGT00390000006366 OMA:LKQNRKM OrthoDB:EOG4GXFP9
EMBL:CH474039 IPI:IPI00364861 RefSeq:XP_001061972.2
RefSeq:XP_216387.3 Ensembl:ENSRNOT00000022987 GeneID:298032
KEGG:rno:298032 UCSC:RGD:1307983 NextBio:643007 Uniprot:D3Z914
Length = 104
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
Q+AAL A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct: 68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102
>UNIPROTKB|Q8AVV6 [details] [associations]
symbol:inip "SOSS complex subunit C" species:8355 "Xenopus
laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
GO:GO:0006281 GO:GO:0010212 GO:GO:0070876 CTD:58493 EMBL:BC041246
RefSeq:NP_001079381.1 UniGene:Xl.6986 GeneID:379068 KEGG:xla:379068
Xenbase:XB-GENE-988718 Uniprot:Q8AVV6
Length = 110
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 22/36 (61%), Positives = 32/36 (88%)
Query: 43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
Q+AAL A+A S+G++ITQDS+FGN++LPV+PR +A
Sbjct: 74 QKAALQHAHAHSSGYFITQDSAFGNLILPVIPRLEA 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 78 67 0.00091 102 3 11 23 0.46 28
29 0.49 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 415 (44 KB)
Total size of DFA: 69 KB (2061 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.00u 0.16s 8.16t Elapsed: 00:00:00
Total cpu time: 8.00u 0.16s 8.16t Elapsed: 00:00:00
Start: Thu Aug 15 11:51:59 2013 End: Thu Aug 15 11:51:59 2013