RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4796
(274 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 49.2 bits (118), Expect = 4e-09
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHL-LTHTGEKPFACHL 125
KPY C C F++ L H+ HT E+P C +
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 39.6 bits (93), Expect = 1e-05
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 216 TGDKPFACSYCDYTCNQSSNLQTHLR-IHKTEREYAC 251
+ KP+ C C ++ +L H++ +H +ER + C
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 31.5 bits (72), Expect = 0.006
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 188 TDKKKFVCFACPYATQYACYIKTHV-MTHTGDKPFAC 223
+ K ++C +C ++ H+ HT ++P C
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 26.1 bits (58), Expect = 0.61
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 116 TGEKPFACHLCPYRASRKYYITAHL 140
+ KP+ C C SR ++ H+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHI 25
Score = 24.2 bits (53), Expect = 2.6
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 245 TEREYACGKCAYRTAALPDLKLHLKNMH 272
+ Y C C + L H+K +H
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 23.8 bits (52), Expect = 4.4
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 65 FLCLFCSYVATARIAIKNHL-SSHLGWKPYKC 95
++C C + + H+ H +P+KC
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 47.2 bits (113), Expect = 2e-08
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 87 HLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGE 118
H G KPY C C F++ +L +H HTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 45.3 bits (108), Expect = 7e-08
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 215 HTGDKPFACSYCDYTCNQSSNLQTHLRIHKTE 246
H+G+KP+ C C ++SS L H R+H E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 33.4 bits (77), Expect = 0.001
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 115 HTGEKPFACHLCPYRASRKYYITAH 139
H+GEKP+ C C SR + H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQH 26
Score = 25.3 bits (56), Expect = 0.90
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 188 TDKKKFVCFACPYATQYACYIKTHVMTHTG 217
+ +K + C C A + + H HTG
Sbjct: 3 SGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 24.5 bits (54), Expect = 1.9
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 242 IHKTEREYACGKCAYRTAALPDLKLHLK 269
IH E+ Y C +C + L H +
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQR 28
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.2 bits (110), Expect = 4e-08
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 214 THTGDKPFACSYCDYTCNQSSNLQTHLRIHKTE 246
THTG+KP+ACS+CD T Q L H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 43.1 bits (102), Expect = 4e-07
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 87 HLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGEK 119
H G KPY C HCD F QK +L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 33.1 bits (76), Expect = 0.002
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 114 THTGEKPFACHLCPYRASRKYYITAH 139
THTGEKP+AC C +K + H
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMH 27
Score = 26.2 bits (58), Expect = 0.49
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 241 RIHKTEREYACGKCAYRTAALPDLKLHLKNMH 272
R H E+ YAC C L +H K H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 23.5 bits (51), Expect = 5.0
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 186 TRTDKKKFVCFACPYATQYACYIKTHVMTHTGDK 219
T T +K + C C + + H +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 45.9 bits (109), Expect = 5e-08
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 83 HLSSHLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGE 118
+ YKC C F+ L +H THTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 45.2 bits (107), Expect = 1e-07
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 211 HVMTHTGDKPFACSYCDYTCNQSSNLQTHLRIHKTE 246
+ + C C + + SS+L H R H E
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 35.5 bits (82), Expect = 2e-04
Identities = 5/30 (16%), Positives = 9/30 (30%)
Query: 110 RHLLTHTGEKPFACHLCPYRASRKYYITAH 139
R + + C C S ++ H
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKH 31
Score = 27.4 bits (61), Expect = 0.19
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 239 HLRIHKTEREYACGKCAYRTAALPDLKLHLK 269
+ R Y C +C + DL H +
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
Score = 25.1 bits (55), Expect = 1.3
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 186 TRTDKKKFVCFACPYATQYACYIKTHVMTHTG 217
+ +++++ C C + ++ + H THTG
Sbjct: 6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.7 bits (109), Expect = 6e-08
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 214 THTGDKPFACSYCDYTCNQSSNLQTHLRIHKTE 246
TH+G+KP+ C C QS ++ H+ TE
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 42.3 bits (100), Expect = 1e-06
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 87 HLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGEK 119
H G KPY+C C FTQ ++ H+L E
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 35.0 bits (81), Expect = 4e-04
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 114 THTGEKPFACHLCPYRASRKYYITAHL 140
TH+GEKP+ C++C R ++ + H+
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHI 28
Score = 26.9 bits (60), Expect = 0.29
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 241 RIHKTEREYACGKCAYRTAALPDLKLHLKNMH 272
R H E+ Y C C R +K+H+ H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 45.3 bits (108), Expect = 8e-08
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTGEK 119
+ + C C F ++ L+RH +HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 38.0 bits (89), Expect = 3e-05
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIHKTER 247
+ F C C + +L+ H R H E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.7 bits (57), Expect = 0.60
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 191 KKFVCFACPYATQYACYIKTHVMTHTGDK 219
+ FVC C A ++K H +HT +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 23.4 bits (51), Expect = 5.0
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 119 KPFACHLCPYRASRKYYITAH 139
+ F C +C +R+ ++ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH 21
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 44.7 bits (106), Expect = 1e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 211 HVMTHTGDKPFACSYCDYTCNQSSNLQTHLRIH 243
TG KPF C CD + ++S +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.3 bits (92), Expect = 1e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 83 HLSSHLGWKPYKCPHCDHCFTQKVVLQRHLLTHTG 117
G KP++CP CD F++ L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 32.8 bits (75), Expect = 0.002
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 111 HLLTHTGEKPFACHLCPYRASRKYYITAH 139
TG KPF C C SR ++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH 30
Score = 26.2 bits (58), Expect = 0.47
Identities = 7/31 (22%), Positives = 10/31 (32%)
Query: 239 HLRIHKTEREYACGKCAYRTAALPDLKLHLK 269
R + + C C + L LH K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 43.9 bits (104), Expect = 2e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTGEK 119
K + CP C F + L +H+ TH +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 37.7 bits (88), Expect = 3e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIHKTER 247
K FAC C +S +L H++ H+ ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.9 bits (60), Expect = 0.24
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 191 KKFVCFACPYATQYACYIKTHVMTHTGDK 219
KKF C CP + ++ H+ TH K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 24.2 bits (53), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 119 KPFACHLCPYRASRKYYITAH 139
K FAC CP R R +++ H
Sbjct: 1 KKFACPECPKRFMRSDHLSKH 21
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 42.4 bits (100), Expect = 8e-07
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 87 HLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGE 118
G +P+ C C FT K RHL HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 40.5 bits (95), Expect = 4e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 215 HTGDKPFACSYCDYTCNQSSNLQTHLRIH 243
+G +PF C C +N HL++H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.9 bits (70), Expect = 0.011
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 115 HTGEKPFACHLCPYRASRKYYITAH 139
+G++PF C +C + K H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH 26
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.1 bits (94), Expect = 6e-06
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 93 YKCPH--CDHCFTQKVVLQRHLLTHTGEKPFAC 123
+ CP C F K L+ H+ H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 33.2 bits (76), Expect = 0.002
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 221 FACSY--CDYTCNQSSNLQTHLRIHKTEREYAC 251
F+C C + N +L+ H+++H R+Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 30.1 bits (68), Expect = 0.021
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 195 CFACPYATQYACYIKTHVMTHTGDKPFACSY 225
AC + + ++K H+ H+ + + C +
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 23.1 bits (50), Expect = 6.7
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 67 CLFCSYVATARIAIKNHLSSHLGWKPYKC 95
C + +K H+ H + Y C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 39.9 bits (94), Expect = 7e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTG 117
KP++C C F++ L H+ THTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 36.0 bits (84), Expect = 1e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIH 243
KPF C C ++S +L TH+R H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 24.5 bits (54), Expect = 2.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 118 EKPFACHLCPYRASRKYYITAH 139
+KPF C +C SR ++T H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTH 22
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 39.6 bits (93), Expect = 7e-06
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTGEK 119
+P+ C C FT+ LQRH THTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.2 bits (79), Expect = 6e-04
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 219 KPFACSY--CDYTCNQSSNLQTHLRIHKTER 247
+PF C++ C +S LQ H R H E+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 38.8 bits (90), Expect = 2e-05
Identities = 6/35 (17%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 87 HLGWKPYKCPHCD--HCFTQKVVLQRHLLTHTGEK 119
+ K ++C F ++ ++ H+ TH ++
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 35.3 bits (81), Expect = 4e-04
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 211 HVMTHTGDKPFACSYCD--YTCNQSSNLQTHLRIHKTER 247
+ DK F C + T + N+++H++ H +R
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.4 bits (58), Expect = 0.51
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 108 LQRHLLTHTGEKPFACHLCP--YRASRKYYITAH 139
+ +++ +K F C R+Y I +H
Sbjct: 7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSH 39
Score = 23.4 bits (50), Expect = 6.6
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 192 KFVCFACPYATQYACYIKTHVMTHTGDK 219
+ + C + I++H+ TH D+
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 37.7 bits (88), Expect = 4e-05
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTGE 118
KP+KC C +++ L+ HL +HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 32.7 bits (75), Expect = 0.002
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 219 KPFACSY--CDYTCNQSSNLQTHLRIHKTE 246
KP C++ C + ++ NL+THLR H E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 35.4 bits (82), Expect = 2e-04
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTGE 118
KP++C C F+ L+ H+ HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 31.2 bits (71), Expect = 0.009
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 219 KPFACSY--CDYTCNQSSNLQTHLRIHKTE 246
KPF C++ C + NL+TH+RIH +
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 35.8 bits (82), Expect = 3e-04
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTGEKPFACHLCPYRASRKYYITAHL 140
K Y C C FT K RH+ H G +P+ C +C + K+++ H+
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 35.0 bits (80), Expect = 6e-04
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 191 KKFVCFACPYATQYACYIKTHVMTHTGDKPFACSYCDYTCNQSSNLQTHLRIH 243
K + C C + + H+ H G +P+ C C +L H++IH
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.7 bits (79), Expect = 8e-04
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 218 DKPFACSYCDYTCNQSSNLQTHLRIHKTEREYACGKCAYRTAALPDLKLHLK 269
DK + C C + S H+ +H R Y CG C + L H+K
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 32.3 bits (73), Expect = 0.005
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 70 CSYVATARIAIKNHLSSHLGWKPYKCPHCDHCFTQKVVLQRHLLTH 115
C T + H+S HLG +PY C C F K L H+ H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 34.2 bits (79), Expect = 7e-04
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTGE 118
+PY C H CD F + L RH +H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 32.7 bits (75), Expect = 0.002
Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 218 DKPFACSY--CDYTCNQSSNLQTHLRIH 243
D+P++C + CD ++ +L H + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 33.8 bits (78), Expect = 8e-04
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTG 117
+PY CP CD F++ L RH+ HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 32.3 bits (74), Expect = 0.003
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 219 KPFACSY--CDYTCNQSSNLQTHLRIH 243
+P+AC CD ++S++L H+RIH
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 33.7 bits (78), Expect = 8e-04
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHT 116
KPYKC C F+Q L H HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 32.9 bits (76), Expect = 0.002
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIH 243
KP+ C C +Q+S L H RIH
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 31.7 bits (71), Expect = 0.006
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLR 241
K + C YC++ SSNL+TH++
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIK 23
Score = 24.3 bits (52), Expect = 2.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 247 REYACGKCAYRTAALPDLKLHLKNMH 272
+ Y C C +R+A +LK H+K H
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKH 26
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.9 bits (69), Expect = 0.009
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIH 243
KP+ C CDY SS+L HLRIH
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIH 26
Score = 25.5 bits (55), Expect = 0.88
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHT 116
KPYKC CD+ L +HL H+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.4 bits (69), Expect = 0.013
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHT 116
+PY CP C+ F Q L+ H+LTH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 29.2 bits (66), Expect = 0.036
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 219 KPFACSY--CDYTCNQSSNLQTHLRIH 243
+P+ C + C+ QS+NL++H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 29.3 bits (65), Expect = 0.036
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 92 PYKCPHCDHCFTQKVVLQRHLLTHTG 117
P+KC C CF++K L+ H+ HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 29.2 bits (65), Expect = 0.046
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 218 DKPFACSYCDYTCNQSSNLQTHLRIH 243
++PF C C Y SS L HLR H
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSH 26
Score = 27.7 bits (61), Expect = 0.16
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 118 EKPFACHLCPYRASRKYYITAHLNS 142
E+PF C +CPY + +T HL S
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRS 25
Score = 25.4 bits (55), Expect = 0.86
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 190 KKKFVCFACPYATQYACYIKTHVMTHTGD 218
++ F C CPYA++ + + H+ +HTGD
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 25.0 bits (54), Expect = 1.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTGE 118
+P+KC C + L HL +HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 29.3 bits (65), Expect = 0.050
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTGEKPFA 122
K C C F L RH L+H+GEKP++
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
Score = 24.3 bits (52), Expect = 2.9
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 190 KKKFVCFACPYATQYACYIKTHVMTHTGDKPFA 222
+K+ C C + ++ H ++H+G+KP++
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.8 bits (64), Expect = 0.054
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLR 241
+PF C+YC + Q SNL H++
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMK 23
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 26.9 bits (59), Expect = 0.25
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 118 EKPFACHLCPYRASRKYYITAHLNS 142
EKP++C +C R RK ++ H+ S
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRS 25
Score = 25.4 bits (55), Expect = 0.93
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTHTG 117
KPY CP C F +K + H+ +H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.4 bits (58), Expect = 0.43
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 221 FACSYCDYTCNQSSNLQTHLRIHKTER 247
+ C C + S L+ H+R H R
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 25.2 bits (55), Expect = 0.99
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 93 YKCPHCDHCFTQKVVLQRHLLTHTGEK 119
Y C C + +L++H+ THT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.7 bits (56), Expect = 0.62
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 95 CPHCDHCFTQKVVLQRHLLTHTGE 118
C C F + L+RH L HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 25.4 bits (55), Expect = 0.85
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 92 PYKCPH--CDHCFTQKVVLQRHLLTH 115
PY+CPH CD F+ L+RH H
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVH 28
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 25.5 bits (55), Expect = 0.95
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 93 YKCPHCDHCFTQKVVLQRHLLTHTGE 118
+ C C F +++ L+ H+++HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 25.4 bits (55), Expect = 1.0
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 91 KPYKCPH--CDHCFTQKVVLQRHLLTHTGE 118
KP+ C C+ FT L RH LTHTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 26.6 bits (58), Expect = 1.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 93 YKCPHCDHCFTQKVVLQRHLLTHTGE 118
Y+C HCD L HL H E
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIHNEE 44
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 24.7 bits (53), Expect = 1.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 94 KCPHCDHCFTQKVVLQRHLLTHTGEK 119
+CP C F K L+ H HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 24.8 bits (54), Expect = 1.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 92 PYKCPHCDHCFTQKVVLQRH 111
PY C C+ FT++ +L RH
Sbjct: 1 PYPCGLCNRAFTRRDLLIRH 20
>d1v54f_ g.41.5.3 (F:) Cytochrome c oxidase Subunit F {Cow (Bos
taurus) [TaxId: 9913]}
Length = 98
Score = 26.2 bits (58), Expect = 1.7
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 4/25 (16%)
Query: 91 KPYKCPHCDHCFTQKVVLQRHLLTH 115
+ +CP C + L H L H
Sbjct: 78 EAQRCPSCGTHY----KLVPHQLAH 98
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 24.8 bits (54), Expect = 1.9
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 218 DKPFACSYCDYTCNQSSNLQTHLRIHKTERE 248
DKPF C+ C Q + HL +HK + E
Sbjct: 4 DKPFLCTA--PGCGQRFTNEDHLAVHKHKHE 32
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.3 bits (52), Expect = 2.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 248 EYACGKCAYRTAALPDLKLHLKNMHLY 274
++ C C A DL +HL+ H Y
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLRKQHSY 28
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 24.0 bits (51), Expect = 2.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 92 PYKCPHCDHCFTQKVVLQRHLL 113
PYKC C F QK LQ H++
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMI 23
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 26.4 bits (58), Expect = 3.2
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 90 WKPYKCPHCDHCFTQKVVLQRHLLTHTGEK 119
W+ YKC C + L+ HL H G K
Sbjct: 144 WQFYKCEECGK-YVDIENLEAHLREH-GIK 171
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.9 bits (51), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 220 PFACSYCDYTCNQSSNLQTHLRIHKTE 246
P CS C Y+C+ + L+ H RIH T+
Sbjct: 2 PEKCSECSYSCSSKAALRIHERIHCTD 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 23.6 bits (51), Expect = 4.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 218 DKPFACSYCDYTCNQSSNLQTHLRIH 243
+KPFAC C +S + H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.5 bits (50), Expect = 4.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 93 YKCPHCDHCFTQKVVLQRHLLTH 115
YKC C+ F +K L RH H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 23.9 bits (51), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 218 DKPFACSYCDYTCNQSSNLQTHLRI 242
++P C C QS NL+ HL +
Sbjct: 22 EQPATCPICYAVIRQSRNLRRHLEL 46
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 23.1 bits (50), Expect = 6.6
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 219 KPFACSYCDYTCNQSSNLQTHLRIHKTERE 248
+ + CS+C + L H+ +H+ +R
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 33
>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 313
Score = 25.1 bits (53), Expect = 9.8
Identities = 11/131 (8%), Positives = 34/131 (25%)
Query: 75 TARIAIKNHLSSHLGWKPYKCPHCDHCFTQKVVLQRHLLTHTGEKPFACHLCPYRASRKY 134
T R + ++ KP P ++ ++ + + T + H+ R +
Sbjct: 116 TERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEA 175
Query: 135 YITAHLNSLLSALLLQHFLASQPRRKCVHCSEPISSDMSEIIEHCLVCPNATRTDKKKFV 194
+ + + + H + +++ E + ++
Sbjct: 176 VKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSS 235
Query: 195 CFACPYATQYA 205
F
Sbjct: 236 GFLNVLEVLKH 246
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.135 0.452
Gapped
Lambda K H
0.267 0.0378 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,008,454
Number of extensions: 45651
Number of successful extensions: 435
Number of sequences better than 10.0: 1
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 157
Length of query: 274
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 190
Effective length of database: 1,254,276
Effective search space: 238312440
Effective search space used: 238312440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.8 bits)