Query psy4800
Match_columns 119
No_of_seqs 203 out of 1482
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 18:05:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 100.0 1.3E-33 4.6E-38 219.8 11.5 111 1-114 254-370 (456)
2 4e3q_A Pyruvate transaminase; 100.0 1.2E-32 4.2E-37 215.2 10.9 112 1-116 264-389 (473)
3 4ao9_A Beta-phenylalanine amin 100.0 8.9E-30 3E-34 198.2 9.5 112 1-117 248-369 (454)
4 4a0g_A Adenosylmethionine-8-am 99.9 1.8E-27 6.1E-32 196.1 0.2 113 1-116 623-752 (831)
5 3hmu_A Aminotransferase, class 99.9 1.9E-25 6.4E-30 173.7 10.6 112 1-116 251-372 (472)
6 3i5t_A Aminotransferase; pyrid 99.9 3E-25 1E-29 172.6 10.3 112 1-116 249-375 (476)
7 1ohv_A 4-aminobutyrate aminotr 99.9 5.4E-24 1.8E-28 165.4 11.9 114 1-115 286-400 (472)
8 3tfu_A Adenosylmethionine-8-am 99.9 3E-24 1E-28 166.2 9.7 112 1-116 262-385 (457)
9 3n5m_A Adenosylmethionine-8-am 99.9 8.9E-24 3.1E-28 162.1 11.5 113 1-116 243-368 (452)
10 3gju_A Putative aminotransfera 99.9 1.5E-23 5.2E-28 161.6 10.9 113 1-116 249-375 (460)
11 3oks_A 4-aminobutyrate transam 99.9 2.6E-23 9E-28 160.2 11.4 113 1-116 255-373 (451)
12 4ffc_A 4-aminobutyrate aminotr 99.9 2.9E-23 1E-27 160.2 10.7 113 1-116 253-371 (453)
13 4a6r_A Omega transaminase; tra 99.9 1.4E-23 4.6E-28 161.9 8.7 111 1-115 247-369 (459)
14 3dod_A Adenosylmethionine-8-am 99.9 8.1E-23 2.8E-27 157.0 11.6 111 1-115 239-363 (448)
15 1z7d_A Ornithine aminotransfer 99.9 4.6E-22 1.6E-26 152.6 11.7 112 1-115 240-358 (433)
16 2cjg_A L-lysine-epsilon aminot 99.9 5.1E-22 1.7E-26 153.0 11.1 113 1-115 259-377 (449)
17 3l44_A Glutamate-1-semialdehyd 99.9 1E-21 3.5E-26 149.7 11.5 112 1-116 230-350 (434)
18 4e77_A Glutamate-1-semialdehyd 99.9 1.6E-21 5.5E-26 148.6 11.7 112 1-116 228-348 (429)
19 3i4j_A Aminotransferase, class 99.9 6.1E-22 2.1E-26 150.8 9.1 113 1-116 219-343 (430)
20 2oat_A Ornithine aminotransfer 99.9 1.6E-21 5.4E-26 150.0 10.8 106 1-109 251-363 (439)
21 2epj_A Glutamate-1-semialdehyd 99.8 6.1E-21 2.1E-25 145.5 11.0 111 1-115 231-350 (434)
22 3fq8_A Glutamate-1-semialdehyd 99.8 1.3E-20 4.4E-25 143.3 12.0 111 1-115 227-346 (427)
23 3k28_A Glutamate-1-semialdehyd 99.8 7E-21 2.4E-25 145.2 10.5 111 1-116 228-347 (429)
24 2yky_A Beta-transaminase; tran 99.7 9.6E-23 3.3E-27 159.0 0.0 111 1-116 261-382 (465)
25 3nx3_A Acoat, acetylornithine 99.8 1.3E-20 4.5E-25 141.7 10.6 112 1-115 207-325 (395)
26 3dxv_A Alpha-amino-epsilon-cap 99.8 1.4E-20 5E-25 143.5 10.7 111 1-115 229-345 (439)
27 2e7u_A Glutamate-1-semialdehyd 99.8 2.9E-20 1E-24 141.4 12.0 111 1-116 227-347 (424)
28 1zod_A DGD, 2,2-dialkylglycine 99.8 1.1E-20 3.7E-25 143.8 9.3 112 1-115 231-350 (433)
29 2pb2_A Acetylornithine/succiny 99.8 2E-20 6.8E-25 142.8 9.6 112 1-115 229-346 (420)
30 2cy8_A D-phgat, D-phenylglycin 99.8 7.1E-20 2.4E-24 140.5 10.9 110 1-115 229-350 (453)
31 3a8u_X Omega-amino acid--pyruv 99.8 1.2E-19 4E-24 139.0 10.3 111 1-115 247-373 (449)
32 1s0a_A Adenosylmethionine-8-am 99.8 2.4E-19 8.4E-24 136.3 9.4 111 1-115 233-355 (429)
33 2eo5_A 419AA long hypothetical 99.8 1.5E-18 5E-23 132.1 10.3 103 1-109 240-348 (419)
34 1sff_A 4-aminobutyrate aminotr 99.8 2.7E-18 9.4E-23 129.8 11.2 113 1-115 227-344 (426)
35 3ruy_A Ornithine aminotransfer 99.7 8.6E-18 3E-22 126.0 10.1 106 1-109 210-322 (392)
36 4adb_A Succinylornithine trans 99.7 6.2E-18 2.1E-22 127.0 9.3 110 1-113 211-326 (406)
37 2ord_A Acoat, acetylornithine 99.7 3.1E-16 1E-20 117.9 11.0 111 1-114 211-326 (397)
38 1vef_A Acetylornithine/acetyl- 99.6 3.8E-15 1.3E-19 111.7 10.1 107 1-110 213-325 (395)
39 2eh6_A Acoat, acetylornithine 99.6 2E-14 6.8E-19 106.8 10.2 104 1-109 200-309 (375)
40 2w8t_A SPT, serine palmitoyltr 99.5 7.4E-14 2.5E-18 106.3 9.0 107 1-109 218-335 (427)
41 3kki_A CAI-1 autoinducer synth 99.5 3.6E-14 1.2E-18 107.1 6.6 107 1-109 210-327 (409)
42 3l8a_A METC, putative aminotra 99.3 9E-13 3.1E-17 99.9 5.8 107 1-109 221-343 (421)
43 2bwn_A 5-aminolevulinate synth 99.3 2.7E-12 9.3E-17 96.3 7.1 107 1-109 202-321 (401)
44 1bs0_A Protein (8-amino-7-oxon 99.3 1E-11 3.4E-16 92.6 6.8 106 1-109 192-309 (384)
45 1fc4_A 2-amino-3-ketobutyrate 99.2 1.7E-11 6E-16 91.7 7.4 108 1-109 201-319 (401)
46 3tqx_A 2-amino-3-ketobutyrate 99.2 2.9E-11 9.9E-16 90.1 7.9 107 1-109 199-318 (399)
47 3op7_A Aminotransferase class 99.2 2.7E-11 9.1E-16 90.0 7.2 106 1-108 181-294 (375)
48 3a2b_A Serine palmitoyltransfe 99.1 8.4E-11 2.9E-15 88.0 6.8 108 1-109 197-314 (398)
49 3fdb_A Beta C-S lyase, putativ 99.1 5.7E-11 2E-15 88.0 5.3 107 1-109 177-297 (377)
50 1yiz_A Kynurenine aminotransfe 99.1 7.6E-11 2.6E-15 89.2 4.9 107 1-109 209-335 (429)
51 1ajs_A Aspartate aminotransfer 99.1 6.3E-11 2.1E-15 89.1 3.9 107 1-109 210-344 (412)
52 3dyd_A Tyrosine aminotransfera 99.1 1.9E-10 6.6E-15 87.4 6.1 107 1-109 218-343 (427)
53 1v2d_A Glutamine aminotransfer 99.1 1.8E-10 6.3E-15 85.7 5.7 107 1-109 179-297 (381)
54 1gd9_A Aspartate aminotransfer 99.0 3.1E-10 1E-14 84.6 6.3 108 1-109 187-308 (389)
55 3qgu_A LL-diaminopimelate amin 99.0 3.2E-10 1.1E-14 86.3 6.0 109 1-109 236-364 (449)
56 3dzz_A Putative pyridoxal 5'-p 99.0 2.5E-10 8.6E-15 84.8 4.6 108 1-109 187-309 (391)
57 2x5d_A Probable aminotransfera 99.0 3.2E-10 1.1E-14 85.4 4.3 107 1-109 199-318 (412)
58 3h14_A Aminotransferase, class 99.0 5E-10 1.7E-14 83.6 5.4 107 1-109 188-302 (391)
59 3nra_A Aspartate aminotransfer 99.0 6.5E-11 2.2E-15 88.5 0.4 109 1-109 206-326 (407)
60 3b46_A Aminotransferase BNA3; 99.0 6.1E-10 2.1E-14 85.2 5.7 107 1-109 228-350 (447)
61 3euc_A Histidinol-phosphate am 99.0 1.4E-09 4.7E-14 80.5 7.0 105 1-109 184-296 (367)
62 3ftb_A Histidinol-phosphate am 99.0 7E-10 2.4E-14 81.7 5.3 105 1-108 171-285 (361)
63 3ezs_A Aminotransferase ASPB; 99.0 6.6E-10 2.3E-14 82.3 5.1 105 1-107 181-301 (376)
64 1j32_A Aspartate aminotransfer 98.9 3.9E-10 1.3E-14 84.0 3.8 107 1-109 190-310 (388)
65 1u08_A Hypothetical aminotrans 98.9 3.5E-10 1.2E-14 84.3 3.5 107 1-109 190-309 (386)
66 3hdo_A Histidinol-phosphate am 98.9 1E-09 3.5E-14 81.2 5.9 106 1-109 173-284 (360)
67 2dou_A Probable N-succinyldiam 98.9 2.7E-10 9.3E-15 84.7 2.8 109 1-109 185-303 (376)
68 3piu_A 1-aminocyclopropane-1-c 98.9 4E-10 1.4E-14 85.6 3.7 108 1-109 218-348 (435)
69 2z61_A Probable aspartate amin 98.9 3.7E-10 1.3E-14 83.8 3.5 108 1-109 177-296 (370)
70 2vi8_A Serine hydroxymethyltra 98.9 6.1E-10 2.1E-14 83.2 4.5 105 1-109 185-299 (405)
71 3ke3_A Putative serine-pyruvat 98.9 1.2E-09 3.9E-14 81.9 5.9 103 1-109 162-294 (379)
72 3jtx_A Aminotransferase; NP_28 98.9 1.2E-09 4E-14 81.5 5.7 106 1-108 195-316 (396)
73 2o0r_A RV0858C (N-succinyldiam 98.9 5.1E-10 1.7E-14 84.3 3.7 107 1-109 187-306 (411)
74 3e2y_A Kynurenine-oxoglutarate 98.9 9.4E-10 3.2E-14 82.4 5.0 109 1-109 194-320 (410)
75 2o1b_A Aminotransferase, class 98.9 6E-10 2.1E-14 84.0 3.9 107 1-109 208-326 (404)
76 1lc5_A COBD, L-threonine-O-3-p 98.9 8.1E-10 2.8E-14 81.8 4.5 107 1-109 173-287 (364)
77 1vp4_A Aminotransferase, putat 98.9 1.5E-09 5.1E-14 82.2 6.0 109 1-109 215-334 (425)
78 2r2n_A Kynurenine/alpha-aminoa 98.9 2E-09 6.7E-14 81.7 6.5 108 1-108 218-339 (425)
79 1d2f_A MALY protein; aminotran 98.9 1.4E-09 4.6E-14 81.2 5.5 107 1-108 189-308 (390)
80 3kax_A Aminotransferase, class 98.9 1.1E-09 3.7E-14 81.1 4.4 107 1-109 183-305 (383)
81 2zc0_A Alanine glyoxylate tran 98.9 2.9E-09 1E-13 79.7 6.7 109 1-109 202-322 (407)
82 4dq6_A Putative pyridoxal phos 98.9 1.6E-09 5.6E-14 80.3 5.2 106 1-108 191-312 (391)
83 3ffh_A Histidinol-phosphate am 98.9 3.7E-09 1.3E-13 78.1 7.0 101 3-108 184-294 (363)
84 3asa_A LL-diaminopimelate amin 98.9 3.3E-09 1.1E-13 79.7 6.8 109 1-109 190-315 (400)
85 1o4s_A Aspartate aminotransfer 98.9 1.1E-09 3.8E-14 82.0 4.2 108 1-109 201-316 (389)
86 1c7n_A Cystalysin; transferase 98.9 1.8E-09 6.2E-14 80.6 5.3 106 1-108 191-312 (399)
87 3g0t_A Putative aminotransfera 98.9 3E-09 1E-13 80.3 6.5 107 1-109 209-354 (437)
88 3b1d_A Betac-S lyase; HET: PLP 98.4 2E-10 7E-15 86.0 0.0 106 1-108 191-312 (392)
89 3fvs_A Kynurenine--oxoglutarat 98.9 2.1E-09 7E-14 80.9 5.2 109 1-109 201-327 (422)
90 2gb3_A Aspartate aminotransfer 98.9 2E-09 7E-14 81.0 5.1 106 1-109 201-317 (409)
91 2ay1_A Aroat, aromatic amino a 98.9 8.3E-10 2.8E-14 82.4 2.6 108 1-110 196-330 (394)
92 2zyj_A Alpha-aminodipate amino 98.8 1.8E-09 6E-14 80.9 4.1 109 1-109 190-311 (397)
93 1xi9_A Putative transaminase; 98.8 1.5E-09 5E-14 81.6 3.6 108 1-109 201-323 (406)
94 2q7w_A Aspartate aminotransfer 98.8 6.3E-10 2.2E-14 83.0 1.4 107 1-109 199-332 (396)
95 3f9t_A TDC, L-tyrosine decarbo 98.8 1E-08 3.4E-13 75.7 7.9 106 1-109 195-328 (397)
96 3ei9_A LL-diaminopimelate amin 98.8 2.6E-09 8.7E-14 80.9 4.7 109 1-109 225-352 (432)
97 2dkj_A Serine hydroxymethyltra 98.8 4.3E-09 1.5E-13 78.6 5.8 104 1-109 185-300 (407)
98 1fg7_A Histidinol phosphate am 98.8 3.6E-09 1.2E-13 78.5 4.8 104 2-109 174-286 (356)
99 3lvm_A Cysteine desulfurase; s 98.8 1.6E-08 5.6E-13 75.9 8.4 102 1-109 187-303 (423)
100 3cq5_A Histidinol-phosphate am 98.8 8.2E-09 2.8E-13 76.6 6.6 106 1-109 188-301 (369)
101 3kgw_A Alanine-glyoxylate amin 98.8 2.8E-08 9.6E-13 73.5 9.2 102 1-109 172-306 (393)
102 3gbx_A Serine hydroxymethyltra 98.8 4.6E-09 1.6E-13 78.6 4.9 104 1-109 191-308 (420)
103 3aow_A Putative uncharacterize 98.8 5.1E-09 1.7E-13 80.4 5.0 107 1-109 244-363 (448)
104 1iay_A ACC synthase 2, 1-amino 98.8 6.3E-09 2.1E-13 78.7 5.3 106 1-109 215-343 (428)
105 1bw0_A TAT, protein (tyrosine 98.8 5.5E-09 1.9E-13 78.5 4.8 108 1-109 204-332 (416)
106 1m32_A 2-aminoethylphosphonate 98.8 3.4E-08 1.2E-12 72.2 9.0 102 1-109 155-285 (366)
107 3nyt_A Aminotransferase WBPE; 98.8 1.3E-08 4.3E-13 75.7 6.4 101 1-110 144-267 (367)
108 4eu1_A Mitochondrial aspartate 98.7 1.6E-08 5.6E-13 75.9 6.6 107 1-109 210-344 (409)
109 1eg5_A Aminotransferase; PLP-d 98.7 8.8E-08 3E-12 70.6 10.2 101 1-108 163-278 (384)
110 3ecd_A Serine hydroxymethyltra 98.7 1.2E-08 4.2E-13 76.4 5.4 104 1-109 194-309 (425)
111 2ctz_A O-acetyl-L-homoserine s 98.7 2.9E-08 9.8E-13 75.6 7.4 100 1-109 168-308 (421)
112 3mad_A Sphingosine-1-phosphate 98.7 1.6E-08 5.6E-13 78.5 5.6 105 1-109 263-396 (514)
113 1kmj_A Selenocysteine lyase; p 98.7 2.9E-08 9.8E-13 73.7 6.5 102 1-109 188-320 (406)
114 1vjo_A Alanine--glyoxylate ami 98.7 5.2E-08 1.8E-12 72.4 7.8 102 1-109 183-314 (393)
115 1yaa_A Aspartate aminotransfer 98.7 1.3E-08 4.5E-13 76.5 4.1 107 1-109 203-344 (412)
116 3h7f_A Serine hydroxymethyltra 98.7 1.6E-08 5.6E-13 77.4 4.3 104 1-109 207-321 (447)
117 2dr1_A PH1308 protein, 386AA l 98.7 8.1E-08 2.8E-12 70.9 7.9 102 1-109 170-300 (386)
118 1qz9_A Kynureninase; kynurenin 98.6 2.1E-07 7.2E-12 69.6 10.2 102 1-109 189-324 (416)
119 3frk_A QDTB; aminotransferase, 98.6 7.6E-08 2.6E-12 71.4 7.2 101 1-109 145-267 (373)
120 1t3i_A Probable cysteine desul 98.6 9.3E-08 3.2E-12 71.3 7.5 102 1-109 193-324 (420)
121 2x5f_A Aspartate_tyrosine_phen 98.6 3.1E-08 1.1E-12 74.9 4.9 105 1-107 216-352 (430)
122 3f0h_A Aminotransferase; RER07 98.6 8.2E-08 2.8E-12 70.9 7.1 104 1-109 168-297 (376)
123 2e7j_A SEP-tRNA:Cys-tRNA synth 98.6 5.9E-08 2E-12 71.4 5.6 101 1-109 171-288 (371)
124 3a9z_A Selenocysteine lyase; P 98.6 1.3E-07 4.3E-12 71.4 7.5 102 1-109 199-325 (432)
125 3n0l_A Serine hydroxymethyltra 98.6 6.8E-08 2.3E-12 72.3 5.9 104 1-109 186-301 (417)
126 1elu_A L-cysteine/L-cystine C- 98.6 2.7E-07 9.3E-12 68.2 8.9 102 1-109 178-316 (390)
127 3qhx_A Cystathionine gamma-syn 98.6 3.7E-08 1.2E-12 74.4 4.2 99 1-109 175-283 (392)
128 1cs1_A CGS, protein (cystathio 98.6 4.6E-08 1.6E-12 73.2 4.4 99 1-109 161-269 (386)
129 3ly1_A Putative histidinol-pho 98.6 4E-08 1.4E-12 72.1 3.9 102 5-109 171-283 (354)
130 3uwc_A Nucleotide-sugar aminot 98.5 1.2E-07 4.1E-12 70.1 6.1 102 1-110 146-269 (374)
131 3dr4_A Putative perosamine syn 98.5 3.2E-07 1.1E-11 68.4 8.2 100 1-109 165-288 (391)
132 3t18_A Aminotransferase class 98.5 6.1E-08 2.1E-12 72.8 4.1 103 5-109 216-346 (413)
133 1wyu_B Glycine dehydrogenase s 98.5 4.2E-07 1.4E-11 70.1 8.8 103 1-109 227-363 (474)
134 1gc0_A Methionine gamma-lyase; 98.5 6E-08 2.1E-12 73.0 4.0 100 1-108 174-282 (398)
135 3nnk_A Ureidoglycine-glyoxylat 98.5 1.4E-07 4.9E-12 70.2 5.9 41 69-109 266-309 (411)
136 2rfv_A Methionine gamma-lyase; 98.5 1.4E-07 4.7E-12 70.9 5.7 98 1-108 173-281 (398)
137 2yrr_A Aminotransferase, class 98.5 2.2E-07 7.5E-12 67.6 6.5 102 1-109 148-274 (353)
138 3rq1_A Aminotransferase class 98.5 1.2E-07 4.2E-12 71.2 5.3 103 5-109 217-348 (418)
139 1uu1_A Histidinol-phosphate am 98.5 1.3E-07 4.4E-12 69.3 4.9 103 2-109 163-272 (335)
140 3cai_A Possible aminotransfera 98.5 4.3E-07 1.5E-11 67.7 7.8 102 1-109 189-322 (406)
141 3ele_A Amino transferase; RER0 98.5 8.5E-08 2.9E-12 71.5 3.9 103 2-109 200-323 (398)
142 2cb1_A O-acetyl homoserine sul 98.4 1.5E-07 5E-12 71.3 4.4 100 1-109 164-300 (412)
143 3get_A Histidinol-phosphate am 98.4 1.1E-07 3.9E-12 70.0 3.6 102 5-109 183-297 (365)
144 3nmy_A Xometc, cystathionine g 98.4 8E-08 2.7E-12 73.1 2.8 100 1-108 176-284 (400)
145 3b8x_A WBDK, pyridoxamine 5-ph 98.4 6.2E-07 2.1E-11 66.9 7.5 100 1-109 149-289 (390)
146 2fnu_A Aminotransferase; prote 98.4 1.3E-07 4.4E-12 69.7 3.7 101 1-109 142-267 (375)
147 1b5p_A Protein (aspartate amin 98.4 3.1E-07 1E-11 68.5 5.5 107 1-109 191-310 (385)
148 2po3_A 4-dehydrase; external a 98.4 4.9E-07 1.7E-11 68.3 6.4 100 1-109 159-280 (424)
149 3zrp_A Serine-pyruvate aminotr 98.4 1.3E-06 4.6E-11 64.2 8.5 102 1-109 151-285 (384)
150 2ez2_A Beta-tyrosinase, tyrosi 98.4 3.1E-07 1.1E-11 69.8 5.3 106 1-109 202-332 (456)
151 2oga_A Transaminase; PLP-depen 98.4 2.5E-07 8.6E-12 69.4 4.5 101 1-109 172-294 (399)
152 1mdo_A ARNB aminotransferase; 98.4 3.1E-07 1E-11 68.3 4.5 99 1-109 148-280 (393)
153 3vax_A Putative uncharacterize 98.4 2E-06 6.8E-11 63.9 8.7 99 1-107 183-301 (400)
154 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.4 7.1E-07 2.4E-11 67.8 6.3 100 1-109 179-327 (437)
155 2ch1_A 3-hydroxykynurenine tra 98.3 1.6E-06 5.4E-11 64.3 7.8 102 1-109 167-301 (396)
156 3fsl_A Aromatic-amino-acid ami 98.3 6.1E-07 2.1E-11 66.7 5.5 109 1-109 200-333 (397)
157 3ht4_A Aluminum resistance pro 98.3 5.2E-07 1.8E-11 69.4 5.2 101 1-110 193-308 (431)
158 1o69_A Aminotransferase; struc 98.3 3.7E-07 1.3E-11 68.5 4.1 102 1-109 143-266 (394)
159 3mc6_A Sphingosine-1-phosphate 98.3 1.1E-06 3.9E-11 67.7 6.7 105 1-109 230-364 (497)
160 2x3l_A ORN/Lys/Arg decarboxyla 98.3 2.1E-06 7.1E-11 65.9 8.1 101 1-105 169-283 (446)
161 3d6k_A Putative aminotransfera 98.3 3.5E-07 1.2E-11 69.2 3.5 107 1-109 206-333 (422)
162 1iug_A Putative aspartate amin 98.3 2.8E-06 9.6E-11 61.8 8.2 102 1-109 145-271 (352)
163 3meb_A Aspartate aminotransfer 98.3 6.7E-07 2.3E-11 68.4 5.0 107 1-109 229-371 (448)
164 3acz_A Methionine gamma-lyase; 98.3 6.2E-07 2.1E-11 67.4 4.8 99 1-109 168-276 (389)
165 1b9h_A AHBA synthase, protein 98.3 5.5E-07 1.9E-11 67.0 4.3 102 1-109 147-273 (388)
166 3lws_A Aromatic amino acid bet 98.3 5.1E-07 1.7E-11 66.3 4.1 99 1-109 163-275 (357)
167 2huf_A Alanine glyoxylate amin 98.3 2.3E-06 8E-11 63.3 7.7 102 1-109 168-302 (393)
168 3fkd_A L-threonine-O-3-phospha 98.3 8.5E-07 2.9E-11 65.1 5.2 106 2-109 154-267 (350)
169 2z9v_A Aspartate aminotransfer 98.3 2.4E-06 8.2E-11 63.3 7.5 102 1-109 158-289 (392)
170 2qma_A Diaminobutyrate-pyruvat 98.3 2.7E-06 9.2E-11 65.9 7.8 107 1-109 282-413 (497)
171 3pj0_A LMO0305 protein; struct 98.3 5.9E-07 2E-11 65.9 3.8 102 1-109 165-277 (359)
172 4f4e_A Aromatic-amino-acid ami 98.2 1E-06 3.6E-11 66.4 5.1 107 1-109 222-355 (420)
173 1pff_A Methionine gamma-lyase; 98.2 1.6E-06 5.4E-11 63.2 5.9 97 1-107 107-215 (331)
174 1ax4_A Tryptophanase; tryptoph 98.2 1.3E-06 4.5E-11 66.5 5.6 106 1-108 211-341 (467)
175 3ndn_A O-succinylhomoserine su 98.2 4.6E-07 1.6E-11 69.1 3.0 99 1-109 190-298 (414)
176 3isl_A Purine catabolism prote 98.2 3.4E-06 1.2E-10 62.8 7.5 40 70-109 267-309 (416)
177 2a7v_A Serine hydroxymethyltra 98.2 1.2E-06 4.2E-11 68.6 5.2 104 1-109 225-354 (490)
178 3ez1_A Aminotransferase MOCR f 98.2 2.3E-06 7.8E-11 64.4 6.2 82 1-85 200-299 (423)
179 3n75_A LDC, lysine decarboxyla 98.2 1.3E-06 4.4E-11 71.3 4.9 106 2-111 321-444 (715)
180 1svv_A Threonine aldolase; str 98.2 1.4E-06 4.7E-11 63.5 4.2 101 1-106 171-284 (359)
181 1c4k_A Protein (ornithine deca 98.2 3.2E-06 1.1E-10 69.1 6.6 106 1-108 304-437 (730)
182 3if2_A Aminotransferase; YP_26 98.1 1E-06 3.4E-11 66.7 3.1 106 1-109 233-351 (444)
183 4eb5_A Probable cysteine desul 98.1 1E-05 3.5E-10 59.4 8.4 101 1-109 162-275 (382)
184 1e5e_A MGL, methionine gamma-l 98.1 4.9E-06 1.7E-10 62.9 6.7 99 1-109 171-281 (404)
185 3ppl_A Aspartate aminotransfer 98.1 1.6E-06 5.4E-11 65.5 3.9 105 2-108 209-334 (427)
186 3g7q_A Valine-pyruvate aminotr 98.1 1.7E-06 5.9E-11 64.6 3.9 106 1-109 207-325 (417)
187 2jis_A Cysteine sulfinic acid 98.1 1E-05 3.6E-10 62.9 8.4 46 1-47 283-330 (515)
188 3e9k_A Kynureninase; kynurenin 98.1 1.2E-05 4E-10 61.5 8.4 102 1-109 238-375 (465)
189 3f6t_A Aspartate aminotransfer 98.1 9.9E-06 3.4E-10 63.6 8.1 51 2-54 272-327 (533)
190 3p1t_A Putative histidinol-pho 98.1 2.1E-06 7.2E-11 62.4 3.8 104 1-109 159-268 (337)
191 4hvk_A Probable cysteine desul 98.1 9.8E-06 3.3E-10 59.3 7.2 101 1-109 162-275 (382)
192 1w23_A Phosphoserine aminotran 98.1 1.9E-05 6.4E-10 57.8 8.4 100 1-109 160-281 (360)
193 1qgn_A Protein (cystathionine 98.0 2.7E-06 9.2E-11 65.7 3.8 98 1-109 224-331 (445)
194 3tcm_A Alanine aminotransferas 98.0 3.9E-06 1.3E-10 65.2 4.6 109 1-109 264-403 (500)
195 2bkw_A Alanine-glyoxylate amin 98.0 1.2E-05 4.1E-10 59.1 6.7 102 1-109 161-301 (385)
196 3ffr_A Phosphoserine aminotran 98.0 1.6E-05 5.5E-10 57.9 7.3 100 1-109 154-285 (362)
197 1v72_A Aldolase; PLP-dependent 98.0 1.2E-06 3.9E-11 64.0 0.7 105 1-109 167-283 (356)
198 7aat_A Aspartate aminotransfer 98.0 9.8E-06 3.4E-10 60.4 5.7 107 1-109 202-336 (401)
199 2okj_A Glutamate decarboxylase 98.0 3E-05 1E-09 60.0 8.4 108 1-109 269-405 (504)
200 2aeu_A Hypothetical protein MJ 98.0 1.1E-06 3.7E-11 65.8 0.1 104 1-108 166-279 (374)
201 2oqx_A Tryptophanase; lyase, p 97.9 1.2E-05 4.1E-10 61.1 5.7 106 1-109 211-344 (467)
202 2vyc_A Biodegradative arginine 97.9 1.3E-05 4.3E-10 65.7 5.8 109 1-110 335-465 (755)
203 2c0r_A PSAT, phosphoserine ami 97.9 4.1E-05 1.4E-09 56.3 7.9 95 6-109 166-282 (362)
204 3ri6_A O-acetylhomoserine sulf 97.9 2.1E-05 7E-10 60.4 6.3 100 1-108 191-318 (430)
205 1n8p_A Cystathionine gamma-lya 97.9 5.7E-06 1.9E-10 62.4 2.7 99 1-109 162-274 (393)
206 3jzl_A Putative cystathionine 97.9 3.2E-05 1.1E-09 59.1 6.9 101 1-110 187-302 (409)
207 1rv3_A Serine hydroxymethyltra 97.8 1.9E-05 6.4E-10 61.2 5.0 104 1-109 215-344 (483)
208 1jg8_A L-ALLO-threonine aldola 97.8 1.9E-05 6.5E-10 57.5 4.7 102 1-109 160-272 (347)
209 3cog_A Cystathionine gamma-lya 97.8 2.2E-05 7.6E-10 59.4 5.1 98 1-108 175-283 (403)
210 2fyf_A PSAT, phosphoserine ami 97.7 0.00017 5.7E-09 53.8 8.9 99 2-109 187-317 (398)
211 2c81_A Glutamine-2-deoxy-scyll 97.7 4.4E-05 1.5E-09 57.4 5.7 100 1-109 151-286 (418)
212 3hvy_A Cystathionine beta-lyas 97.6 0.00012 4.3E-09 56.2 6.9 99 1-109 204-318 (427)
213 2fq6_A Cystathionine beta-lyas 97.6 0.00012 4.2E-09 55.7 6.8 98 1-109 191-300 (415)
214 2z67_A O-phosphoseryl-tRNA(SEC 97.6 8.2E-05 2.8E-09 57.0 5.6 104 1-110 255-370 (456)
215 3ju7_A Putative PLP-dependent 97.6 0.00024 8.3E-09 53.2 7.7 100 1-109 150-271 (377)
216 3i16_A Aluminum resistance pro 97.6 4.3E-05 1.5E-09 58.8 3.3 99 1-110 204-319 (427)
217 4e1o_A HDC, histidine decarbox 97.5 0.00062 2.1E-08 52.5 9.4 108 1-109 265-399 (481)
218 3ihj_A Alanine aminotransferas 97.5 4E-05 1.4E-09 59.6 2.3 109 1-109 262-402 (498)
219 1ibj_A CBL, cystathionine beta 97.5 0.00011 3.7E-09 56.9 4.5 78 1-86 241-328 (464)
220 3vp6_A Glutamate decarboxylase 97.4 0.00055 1.9E-08 53.3 7.9 108 1-109 272-408 (511)
221 3k40_A Aromatic-L-amino-acid d 97.4 0.00095 3.2E-08 51.5 8.9 108 1-109 258-392 (475)
222 3hl2_A O-phosphoseryl-tRNA(SEC 97.2 0.00041 1.4E-08 54.4 5.0 108 1-114 240-360 (501)
223 3bwn_A AT1G70560, L-tryptophan 97.2 0.00055 1.9E-08 51.2 5.5 101 2-109 177-301 (391)
224 1js3_A DDC;, DOPA decarboxylas 96.9 0.0071 2.4E-07 46.3 9.5 46 1-47 259-306 (486)
225 2zy4_A L-aspartate beta-decarb 96.8 0.0023 7.9E-08 50.4 6.0 51 2-54 273-329 (546)
226 3bc8_A O-phosphoseryl-tRNA(SEC 96.4 0.0024 8.3E-08 49.5 4.0 111 1-114 222-342 (450)
227 3k7y_A Aspartate aminotransfer 96.3 0.01 3.5E-07 44.9 6.8 20 1-20 201-220 (405)
228 3hbx_A GAD 1, glutamate decarb 96.3 0.0085 2.9E-07 46.5 6.4 35 75-109 324-361 (502)
229 4h51_A Aspartate aminotransfer 96.1 0.0052 1.8E-07 47.0 4.3 20 1-20 217-236 (420)
230 2dgk_A GAD-beta, GADB, glutama 96.0 0.024 8.3E-07 42.9 7.4 19 1-19 211-235 (452)
231 1wyu_A Glycine dehydrogenase ( 95.2 0.18 6.3E-06 37.8 9.6 27 83-109 334-363 (438)
232 3m5u_A Phosphoserine aminotran 94.4 0.086 2.9E-06 39.4 5.9 98 2-109 160-280 (361)
233 3e77_A Phosphoserine aminotran 94.2 0.33 1.1E-05 36.5 8.9 101 2-109 172-292 (377)
234 3qm2_A Phosphoserine aminotran 90.0 0.8 2.7E-05 34.4 6.3 97 6-109 191-307 (386)
235 3ou5_A Serine hydroxymethyltra 89.0 0.65 2.2E-05 36.4 5.2 104 1-109 225-354 (490)
236 2hox_A ALLIIN lyase 1; cystein 78.0 2.5 8.7E-05 31.6 4.2 73 37-109 242-336 (427)
237 2r2a_A Uncharacterized protein 68.4 2.5 8.6E-05 28.8 2.0 15 4-18 85-99 (199)
238 3twe_A Alpha4H; unknown functi 53.7 12 0.00042 16.8 2.2 14 89-102 11-24 (27)
239 3b6e_A Interferon-induced heli 51.5 5.2 0.00018 26.3 1.1 10 8-17 164-173 (216)
240 1c3p_A Protein (HDLP (histone 45.6 15 0.00052 27.6 3.0 12 9-20 162-174 (375)
241 1vec_A ATP-dependent RNA helic 39.9 7.5 0.00026 25.4 0.5 10 8-17 148-157 (206)
242 1zz1_A Histone deacetylase-lik 38.3 24 0.0008 26.5 3.0 32 4-43 167-201 (369)
243 2gxq_A Heat resistant RNA depe 37.8 8.5 0.00029 25.1 0.5 10 8-17 146-155 (207)
244 1rif_A DAR protein, DNA helica 37.8 12 0.0004 26.1 1.2 11 8-18 227-237 (282)
245 2fz4_A DNA repair protein RAD2 37.6 11 0.00039 25.8 1.1 10 8-17 194-203 (237)
246 3r45_C Holliday junction recog 37.2 36 0.0012 19.7 3.0 27 88-114 16-42 (81)
247 1t6n_A Probable ATP-dependent 36.4 9.2 0.00032 25.4 0.5 10 8-17 160-169 (220)
248 3iuy_A Probable ATP-dependent 36.2 9.7 0.00033 25.5 0.6 10 8-17 169-178 (228)
249 1qde_A EIF4A, translation init 35.5 9.7 0.00033 25.3 0.5 10 8-17 157-166 (224)
250 1q0u_A Bstdead; DEAD protein, 34.9 11 0.00036 25.1 0.6 10 8-17 152-161 (219)
251 3dkp_A Probable ATP-dependent 34.7 11 0.00036 25.6 0.6 10 8-17 177-186 (245)
252 2oxc_A Probable ATP-dependent 33.3 12 0.0004 25.2 0.6 9 9-17 169-177 (230)
253 2pl3_A Probable ATP-dependent 33.0 12 0.0004 25.2 0.6 9 9-17 174-182 (236)
254 1wp9_A ATP-dependent RNA helic 33.0 15 0.00052 26.7 1.2 11 8-18 127-137 (494)
255 3fe2_A Probable ATP-dependent 30.9 13 0.00045 25.1 0.6 10 8-17 178-187 (242)
256 2pk8_A Uncharacterized protein 30.0 25 0.00085 21.4 1.6 14 31-46 32-45 (103)
257 2orw_A Thymidine kinase; TMTK, 29.9 19 0.00065 23.7 1.2 10 8-17 78-87 (184)
258 3bor_A Human initiation factor 29.6 14 0.00048 25.0 0.5 10 8-17 175-184 (237)
259 3llm_A ATP-dependent RNA helic 29.4 19 0.00066 24.3 1.2 10 8-17 178-187 (235)
260 1wrb_A DJVLGB; RNA helicase, D 28.9 14 0.0005 25.0 0.5 10 8-17 176-185 (253)
261 2z0m_A 337AA long hypothetical 28.7 15 0.0005 25.7 0.5 10 8-17 131-140 (337)
262 3vup_A Beta-1,4-mannanase; TIM 27.6 19 0.00064 24.8 0.9 15 1-15 97-111 (351)
263 1go4_E MAD1 (mitotic arrest de 27.3 79 0.0027 19.2 3.6 35 70-113 62-98 (100)
264 4e17_B Catenin alpha-1; four h 26.9 56 0.0019 16.5 2.3 25 89-113 11-35 (40)
265 3o63_A Probable thiamine-phosp 26.5 21 0.00071 25.0 1.0 14 1-14 90-103 (243)
266 3ly5_A ATP-dependent RNA helic 26.5 18 0.0006 25.0 0.6 10 8-17 203-212 (262)
267 1hv8_A Putative ATP-dependent 25.9 18 0.0006 25.5 0.5 10 8-17 149-158 (367)
268 3ber_A Probable ATP-dependent 25.6 19 0.00064 24.7 0.6 9 9-17 189-197 (249)
269 2fwr_A DNA repair protein RAD2 24.6 26 0.00088 26.1 1.2 10 8-17 194-203 (472)
270 3pey_A ATP-dependent RNA helic 24.5 19 0.00066 25.6 0.5 10 8-17 147-156 (395)
271 1xti_A Probable ATP-dependent 24.4 20 0.00069 25.6 0.6 10 8-17 154-163 (391)
272 3tbk_A RIG-I helicase domain; 23.8 28 0.00097 26.1 1.3 10 8-17 129-138 (555)
273 3mnf_A PAC2 family protein; PS 23.7 37 0.0013 23.8 1.8 46 70-115 189-235 (250)
274 1oyw_A RECQ helicase, ATP-depe 23.4 29 0.001 26.7 1.3 10 8-17 141-150 (523)
275 3oiy_A Reverse gyrase helicase 23.2 22 0.00075 26.0 0.6 10 8-17 141-150 (414)
276 1fuu_A Yeast initiation factor 23.1 21 0.00073 25.5 0.5 10 8-17 164-173 (394)
277 1s2m_A Putative ATP-dependent 23.0 21 0.00073 25.7 0.5 10 8-17 165-174 (400)
278 2i4i_A ATP-dependent RNA helic 22.9 22 0.00077 25.7 0.6 10 8-17 177-186 (417)
279 3eiq_A Eukaryotic initiation f 22.5 23 0.0008 25.5 0.6 10 8-17 185-194 (414)
280 4a2p_A RIG-I, retinoic acid in 22.4 30 0.001 26.0 1.2 10 8-17 132-141 (556)
281 3kp1_E D-ornithine aminomutase 22.1 34 0.0012 21.6 1.2 29 85-113 16-44 (121)
282 3fht_A ATP-dependent RNA helic 22.0 23 0.00079 25.5 0.5 10 8-17 170-179 (412)
283 4gl2_A Interferon-induced heli 21.7 32 0.0011 27.1 1.2 10 8-17 138-147 (699)
284 1z63_A Helicase of the SNF2/RA 21.4 33 0.0011 25.8 1.2 9 9-17 152-160 (500)
285 2j0s_A ATP-dependent RNA helic 21.1 25 0.00085 25.5 0.5 10 8-17 181-190 (410)
286 2oca_A DAR protein, ATP-depend 21.0 34 0.0011 25.8 1.2 10 8-17 227-236 (510)
287 4a15_A XPD helicase, ATP-depen 20.6 30 0.001 27.5 0.9 11 7-17 205-215 (620)
288 4a69_A Histone deacetylase 3,; 20.6 77 0.0026 23.8 3.1 32 4-43 159-191 (376)
289 2k6o_A Cathelicidin antimicrob 20.3 94 0.0032 15.3 3.0 23 89-111 11-33 (37)
290 3e35_A Uncharacterized protein 20.2 99 0.0034 22.7 3.6 43 70-112 211-256 (325)
291 2ykg_A Probable ATP-dependent 20.0 36 0.0012 26.8 1.2 10 8-17 138-147 (696)
292 3q9b_A Acetylpolyamine amidohy 20.0 62 0.0021 24.0 2.4 29 7-43 187-216 (341)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=1.3e-33 Score=219.76 Aligned_cols=111 Identities=25% Similarity=0.364 Sum_probs=100.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccccc-----ccc-ccccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKPE-----FVP-QQAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~~~-----~~~-~~~~~~~~T~~~~p~ 74 (119)
++|++||++||+|||||||||||++|+++++|+. |||+|+||++ +||+|++.. +.+ ..+..|++||+|||+
T Consensus 254 ~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~--PDivt~gK~l-ggg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpl 330 (456)
T 4atq_A 254 EWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVV--PDIITMAKGI-AGGLPLSAITGRADLLDAVHPGGLGGTYGGNPV 330 (456)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCC--CSEEEECGGG-GTTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHH
T ss_pred HHHhhcCCceEecccccccCCccccccccccCCC--Cchhhhhhcc-cCcCCceeeEecHHHHhcccccCCCCCCCCChH
Confidence 5899999999999999999999999999999998 9999999999 688877543 222 346678999999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESN 114 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p 114 (119)
+|++++++|++|+++++.++++++|++|+++|+++.+++|
T Consensus 331 a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 370 (456)
T 4atq_A 331 ACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELS 370 (456)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999998875
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.98 E-value=1.2e-32 Score=215.22 Aligned_cols=112 Identities=20% Similarity=0.240 Sum_probs=97.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccccc-----ccc--------cccccee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLKPE-----FVP--------QQAYRVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~~~-----~~~--------~~~~~~~ 66 (119)
++|++||++||+|||||||||||++|+++++|+. |||+|+||+| +|| +|++.. +.+ ..+..|+
T Consensus 264 ~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~--PDi~t~~K~l-~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg 340 (473)
T 4e3q_A 264 PILRKYDIPVISDEVICGFGRTGNTWGCVTYDFT--PDAIISSKNL-TAGFFPMGAVILGPELSKRLETAIEAIEEFPHG 340 (473)
T ss_dssp HHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCC--CSEEEECGGG-GTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCC
T ss_pred HHhcccceEEeccCccccCCcccchhHHHhcCCC--CChHHhcccc-cCCCCCcccccccHHHHHHhccccccccccccC
Confidence 4899999999999999999999999999999998 9999999999 677 454332 211 1345689
Q ss_pred eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
+||+|||++|++++++|++++++++.++++++|++|+++|+++.+ +|.|
T Consensus 341 ~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~-~~~v 389 (473)
T 4e3q_A 341 FTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAE-RPNI 389 (473)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTT-STTE
T ss_pred CCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhc-CCCe
Confidence 999999999999999999999999999999999999999999865 5654
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.96 E-value=8.9e-30 Score=198.24 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=98.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcccccc-----cccc-----ccccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKP-----EFVP-----QQAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~~-----~~~~-----~~~~~~~~T~~ 70 (119)
++|++||++||+||||| ||+|.+|+++++|+. |||+|+||+| +||++++. ++++ ..+..|++||+
T Consensus 248 ~lc~~~g~lLI~DEV~t--GR~G~~~a~e~~gv~--PDi~t~gK~l-ggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~ 322 (454)
T 4ao9_A 248 ESATQVGALLVFDEVMT--SRLAPHGLANKLGIR--SDLTTLGKYI-GGGMSFGAFGGRADVMALFDPRTGPLAHSGTFN 322 (454)
T ss_dssp HHHHHHTCEEEEECTTG--GGGSTTCHHHHHTCC--CSEEEEEGGG-GTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTT
T ss_pred HHHhhcCCEEEEECCCc--CCCccccchhccCCC--CcEEEecccc-CCCCcceeeeeHHHHHHHHhhccCCccccCCCC
Confidence 58999999999999999 599999999999999 9999999999 67887643 2222 12346789999
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQP 117 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i~ 117 (119)
+||++|++++++|++++++++++++++++++|+++|+++.+++|.+.
T Consensus 323 gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~ 369 (454)
T 4ao9_A 323 NNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAM 369 (454)
T ss_dssp TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSC
T ss_pred CCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 99999999999999999999999999999999999999998888653
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.93 E-value=1.8e-27 Score=196.11 Aligned_cols=113 Identities=17% Similarity=0.107 Sum_probs=91.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcc-ccc-----ccccc----cc---ccceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGY-FLK-----PEFVP----QQ---AYRVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~-~~~-----~~~~~----~~---~~~~~~ 67 (119)
++|++||++||+|||||||||+|++|+++++|+. |||+||||+| +||| +++ +++.+ .. ...|++
T Consensus 623 ~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~--PDiitlsK~L-~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~ 699 (831)
T 4a0g_A 623 NECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK--PDIACFAKLL-TGGMVPLAVTLATDAVFDSFSGDSKLKALLHGH 699 (831)
T ss_dssp HHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC--CSEEEECGGG-GTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCC
T ss_pred HHHHHcCCeEEEEcCccccccCCCchhhHhcCCC--CcEEEEeccc-ccCccCcEEEEECHHHHHHHhcccccccceeec
Confidence 4899999999999999999999999999999998 9999999999 6775 332 22221 11 234789
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH----HHHhhhhcCCCC
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLN----VRLGLGQESNLQ 116 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~----~L~~l~~~~p~i 116 (119)
||++||++|++++++|++++++++.++++++++++++ .+.+..+++|.|
T Consensus 700 T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v 752 (831)
T 4a0g_A 700 SYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAV 752 (831)
T ss_dssp TTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTE
T ss_pred CCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 9999999999999999999988888888888877654 444444567754
No 5
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.92 E-value=1.9e-25 Score=173.71 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=94.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----ccccc---ccccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVP---QQAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~---~~~~~~~~T~~~ 71 (119)
++|++||++||+||||+||||+|++|+++++++. ||++||||+|+ || ++++ +.+.+ .....+++||++
T Consensus 251 ~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~--pdi~t~sK~l~-gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~ 327 (472)
T 3hmu_A 251 RICDKYDILLIADEVICGFGRTGNWFGTQTMGIR--PHIMTIAKGLS-SGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSG 327 (472)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCC--CSEEEECGGGT-TTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTT
T ss_pred HHHHHcCCEEEEEccccCCcccCccchhHHhCCC--Cceeeechhhh-cCCcceEEEEECHHHHHhcccCCccccCCCCC
Confidence 4899999999999999999999999999999998 99999999994 54 3443 22222 123357789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHHHHhhhhcCCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQ-KTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~-~~g~~l~~~L~~l~~~~p~i 116 (119)
||+++++++++|+.++++++.++++ ++++++++.|+++.+ +|.+
T Consensus 328 np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~v 372 (472)
T 3hmu_A 328 HPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTD-HPLV 372 (472)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGG-STTE
T ss_pred CHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-CCCe
Confidence 9999999999999998889999999 999999999988753 6643
No 6
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.92 E-value=3e-25 Score=172.58 Aligned_cols=112 Identities=24% Similarity=0.380 Sum_probs=94.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhh-hcCCCCCCCEEEEchhhccCcc-ccc-----cccccc-cc-------cce
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHE-HFDLEESPDIVTFSKKMQLGGY-FLK-----PEFVPQ-QA-------YRV 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~-~~g~~~~pDi~t~gK~lg~gG~-~~~-----~~~~~~-~~-------~~~ 65 (119)
++|++||++||+||||+||||+|++|+++ ++++. ||++||||++ +||| +++ +.+.+. .+ ..+
T Consensus 249 ~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~--pdi~t~sK~l-~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~ 325 (476)
T 3i5t_A 249 AICEKHDILYISDEVVTGFGRCGEWFASEKVFGVV--PDIITFAKGV-TSGYVPLGGLAISEAVLARISGENAKGSWFTN 325 (476)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCC--CSEEEECGGG-GTTSSCCEEEEECHHHHHTTSGGGCTTCEECC
T ss_pred HHHHHcCCEEEEEecccCCccccCceeeecccCCC--cchhhhhhhh-cCCCcCeEEEEECHHHHHHHhcCCcccccccc
Confidence 48999999999999999999999988888 99998 9999999999 5673 332 223221 11 256
Q ss_pred eeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
.+||++||++|++++++|+.++++++.++++++++++++.|+++. ++|.+
T Consensus 326 ~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v 375 (476)
T 3i5t_A 326 GYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DLPGV 375 (476)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-TSTTE
T ss_pred cCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCCCe
Confidence 789999999999999999999888999999999999999999764 56643
No 7
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.91 E-value=5.4e-24 Score=165.36 Aligned_cols=114 Identities=50% Similarity=0.920 Sum_probs=99.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchh-hccCccccccccccccccceeeccCCCHHHHHHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKK-MQLGGYFLKPEFVPQQAYRVFNTWMGDPGKVLLL 79 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~-lg~gG~~~~~~~~~~~~~~~~~T~~~~p~~~a~a 79 (119)
++|++||++||+||||+||||+|.+++++++|+...||++||||+ + +||+++.+.+....+..+++||++||++++++
T Consensus 286 ~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l-~GG~~~~~~~~~~~~~~~~~T~~~~~~~~aaa 364 (472)
T 1ohv_A 286 DISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMM-TGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLL 364 (472)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGS-SEEEEECGGGSCSSSSSSCCSSSSCHHHHHHH
T ss_pred HHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccc-cCCccCchhhcccccccccCccCccHHHHHHH
Confidence 489999999999999999999999888898887434999999999 7 57888755564334566789999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 80 KGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 80 ~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+++|+.++++++.+++++++++|+++|+++..++|.
T Consensus 365 ~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 400 (472)
T 1ohv_A 365 AEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQ 400 (472)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999999988889999999999999999998766774
No 8
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.91 E-value=3e-24 Score=166.22 Aligned_cols=112 Identities=20% Similarity=0.243 Sum_probs=94.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcc-ccc-----cccccc----c--ccceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGY-FLK-----PEFVPQ----Q--AYRVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~-~~~-----~~~~~~----~--~~~~~~T 68 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||+| +||+ +++ +++.+. . ...+++|
T Consensus 262 ~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~--pdiit~sK~l-~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t 338 (457)
T 3tfu_A 262 DICRRYEVLLIFDEIATGFGRTGALFAADHAGVS--PDIMCVGKAL-TGGYLSLAATLCTADVAHTISAGAAGALMHGPT 338 (457)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC--CSEEEECGGG-GTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCT
T ss_pred HHHHHcCCEEEEEcCccCCccccchhHhHhcCCC--ceEEEEChhh-hCCCcceEEEEEcHHHHHHhhccCCCceeEecC
Confidence 4899999999999999999999999999999998 9999999999 6775 332 222211 1 2367899
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
|++||++|++++++|+.++++++.+++++++++++++|+++. ++|.+
T Consensus 339 ~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v 385 (457)
T 3tfu_A 339 FMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALPAV 385 (457)
T ss_dssp TTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GSTTE
T ss_pred CCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCCCe
Confidence 999999999999999999888999999999999999999876 46643
No 9
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.90 E-value=8.9e-24 Score=162.14 Aligned_cols=113 Identities=31% Similarity=0.441 Sum_probs=95.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----cccccc-------cccceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVPQ-------QAYRVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~~-------~~~~~~~ 67 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||+++ +| ++++ +.+.+. ....+++
T Consensus 243 ~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~--~di~t~sK~l~-~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (452)
T 3n5m_A 243 ETCQKHGALLISDEVICGFGRTGKAFGFMNYDVK--PDIITMAKGIT-SAYLPLSATAVKREIYEAFKGKGEYEFFRHIN 319 (452)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCC--CSEEEECGGGG-TTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCC
T ss_pred HHHHHcCCEEEEecchhCCCcccccchhhhcCCC--CCEEeeccccc-CCCcceEEEEECHHHHHHHhhccCCCCccccC
Confidence 4899999999999999999999999899999998 99999999995 56 3332 223221 2234678
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
||++||+++++++++|+.++++++.++++++++++++.|+++.+++|.+
T Consensus 320 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 368 (452)
T 3n5m_A 320 TFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLV 368 (452)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9999999999999999999888999999999999999999987777743
No 10
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.90 E-value=1.5e-23 Score=161.63 Aligned_cols=113 Identities=20% Similarity=0.204 Sum_probs=95.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcc-ccc-----cccccc--------ccccee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGY-FLK-----PEFVPQ--------QAYRVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~-~~~-----~~~~~~--------~~~~~~ 66 (119)
++|++||++||+||||+||||+|++++++++++. ||++||||+| +||+ +++ +.+.+. ....+.
T Consensus 249 ~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~--pdi~t~sK~l-~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~ 325 (460)
T 3gju_A 249 AVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIK--PDLITIAKGL-TSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHG 325 (460)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCC--CSEEEECGGG-TTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCC
T ss_pred HHHHHcCCEEEEeccccCCCcccccchHhhcCCC--CCeeeeehhh-cCCCCCeEEEEECHHHHHHHhcccccccccccC
Confidence 4899999999999999999999998889999998 9999999999 5663 332 222221 233567
Q ss_pred eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
+||++||+++++++++|+.++++++.+++++++++++++|++..+++|.+
T Consensus 326 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 375 (460)
T 3gju_A 326 WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNV 375 (460)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 89999999999999999999888999999999999999998887777753
No 11
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.90 E-value=2.6e-23 Score=160.22 Aligned_cols=113 Identities=26% Similarity=0.357 Sum_probs=97.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccccc-ccccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVP-QQAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~-~~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||++ ++|++++ +.+.+ ..+..+.+||++||+
T Consensus 255 ~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~--pdi~t~sK~l-~~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 255 DWCRKNDVVFIADEVQTGFARTGAMFACEHEGID--PDLIVTAKGI-AGGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGG-GTTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHHcCCEEEEEecccCCCccccchhhhhcCCC--CCeeeehhhh-hCCcceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 4899999999999999999999999999999998 9999999999 4566543 22333 234457889999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
++++++++|+.++++++.++++++++++++.|+++.+++|.+
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 373 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRI 373 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 999999999999888999999999999999999998778753
No 12
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.89 E-value=2.9e-23 Score=160.15 Aligned_cols=113 Identities=25% Similarity=0.351 Sum_probs=97.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccccc-ccccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVP-QQAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~-~~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||+++ +|++++ +.+.+ ..+..+.+||++||+
T Consensus 253 ~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~--pdi~t~sK~~~-~G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~ 329 (453)
T 4ffc_A 253 AWASENGVVFIADEVQTGFARTGAWFASEHEGIV--PDIVTMAKGIA-GGMPLSAVTGRAELMDAVYAGGLGGTYGGNPV 329 (453)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC--CSEEEECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHH
T ss_pred HHHHHcCCEEEEecCccCCCcccccchhhhcCCC--cchHhhhhhhc-CCcCeEEEEECHHHHhhhcccCcCCCCCcCHH
Confidence 4899999999999999999999999999999998 99999999994 565543 22332 233457889999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
++++++++|+.++++++.++++++++++++.|+++.+++|.+
T Consensus 330 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 371 (453)
T 4ffc_A 330 TCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDII 371 (453)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 999999999999888999999999999999999998778753
No 13
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.89 E-value=1.4e-23 Score=161.86 Aligned_cols=111 Identities=20% Similarity=0.320 Sum_probs=92.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----cccccc----cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVPQ----QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~~----~~~~~~~T~~ 70 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||+|+ || ++++ +.+.+. ....+.+||+
T Consensus 247 ~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~--pdi~t~sK~l~-gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~ 323 (459)
T 4a6r_A 247 RICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQ--PDLFTAAKGLS-SGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYS 323 (459)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC--CSEEEECGGGG-TTSSCCEEEEECHHHHHHHHHHCTTHHHHHHC
T ss_pred HHHHHcCCEEEEeccccCCCcccccchHhhcCCC--CCeeehhhhhc-CCCCCccceeeCHHHHHHhhcCCCcccCCCCC
Confidence 4899999999999999999999998889999998 99999999994 44 3432 223221 1345678999
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHHH-HhhhhcCCC
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQ-KTGDILLNVR-LGLGQESNL 115 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~-~~g~~l~~~L-~~l~~~~p~ 115 (119)
+||+++++++++|+.++++++.++++ ++++++++.| +.+ +++|.
T Consensus 324 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~ 369 (459)
T 4a6r_A 324 GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETF-SRFEH 369 (459)
T ss_dssp SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHH-TTCTT
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence 99999999999999998889999999 9999999999 555 45664
No 14
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.89 E-value=8.1e-23 Score=156.98 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=93.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcc-ccc-----cccccc-cc-------ccee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGY-FLK-----PEFVPQ-QA-------YRVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~-~~~-----~~~~~~-~~-------~~~~ 66 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||++ ++|+ +++ +.+.+. .. ..+.
T Consensus 239 ~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~--~di~t~sK~l-~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~ 315 (448)
T 3dod_A 239 ELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQ--PDLMAAGKGI-TGGYLPIAVTFATEDIYKAFYDDYENLKTFFHG 315 (448)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGG-GTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCC
T ss_pred HHHHHhCCEEEEeccccCCCcccchhhhhhcCCC--CCEEEecccc-cCCcCceEEEEECHHHHHHhhhccccCCccccc
Confidence 4899999999999999999999999899999998 9999999999 5675 432 223221 11 4467
Q ss_pred eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+||++||+++++++++|+.++++++.++++++++++++.|++ ..++|.
T Consensus 316 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~ 363 (448)
T 3dod_A 316 HSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPH 363 (448)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTT
T ss_pred CCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 899999999999999999998889999999999999999998 556664
No 15
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.87 E-value=4.6e-22 Score=152.61 Aligned_cols=112 Identities=25% Similarity=0.398 Sum_probs=94.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||+++ +| ++.+ +.+.+. .+..+.+||++||
T Consensus 240 ~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~--~di~t~sK~l~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~ 316 (433)
T 1z7d_A 240 DICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVK--PDVILLGKALS-GGHYPISAVLANDDIMLVIKPGEHGSTYGGNP 316 (433)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TTSSCCEEEEECHHHHTTCCTTCCCCTTTTCH
T ss_pred HHHHHcCCEEEEecCccCCCcCCcchhhHhcCCC--CCEEEECcccc-CCCCCeEEEEECHHHHhhhccccccccCCCCH
Confidence 4899999999999999999999998888889987 99999999995 66 3332 233322 2334678999999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 74 GKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
++++++.++|+.++++++.+++++++++++++|+++.+++|.
T Consensus 317 ~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 358 (433)
T 1z7d_A 317 LAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKI 358 (433)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999988889999999999999999998666664
No 16
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.87 E-value=5.1e-22 Score=152.96 Aligned_cols=113 Identities=28% Similarity=0.424 Sum_probs=96.5
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccccccccc------cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKPEFVPQ------QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~~~~~~~------~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||||+||||+|.+++++++++. ||++||||++..|+++..+.+.+. .+..+.+||++||+
T Consensus 259 ~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~--~di~t~sK~l~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~ 336 (449)
T 2cjg_A 259 ELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVA--PDIVAFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLT 336 (449)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCC--CSEEEECGGGSSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHH
T ss_pred HHHHHCCcEEEEeccccCCCccCcceeecccCCC--ceEEEecCcccEEEEEECHHHhhhhhhcccCCcccccCCCCCHH
Confidence 4899999999999999999999998888889987 999999999854555545555442 23456789999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+++++.++|+.++++++.+++++++++++++|+++..++|.
T Consensus 337 ~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 377 (449)
T 2cjg_A 337 DMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPA 377 (449)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999988889999999999999999998766775
No 17
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.87 E-value=1e-21 Score=149.69 Aligned_cols=112 Identities=19% Similarity=0.241 Sum_probs=94.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc----cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ----QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~----~~~~~~~T~~~ 71 (119)
++|++||++||+||||+|| |+|.+++++++++. ||++||||+++ +|++++ +.+.+. .+..+++||++
T Consensus 230 ~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~--~di~t~sK~~~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~ 305 (434)
T 3l44_A 230 ELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVT--PDLTALGKVIG-GGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAG 305 (434)
T ss_dssp HHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCC--CSEEEEEGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHcCCEEEEeccccce-eccccHHHHHcCCC--CCeeehhhhhc-CCcCeeeEEEcHHHHHhhccCCCcccCCCCCc
Confidence 4899999999999999999 99998889999998 99999999994 666543 223221 22457889999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
||+++++++++|+.++++++.++++++++++++.|+++..+++.+
T Consensus 306 ~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 350 (434)
T 3l44_A 306 NPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNID 350 (434)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999888899999999999999999987666643
No 18
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.86 E-value=1.6e-21 Score=148.56 Aligned_cols=112 Identities=20% Similarity=0.214 Sum_probs=93.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc----cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ----QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~----~~~~~~~T~~~ 71 (119)
++|++||++||+||||+|| |+|.+++.+++++. ||++||||+++ +|++.+ +.+.+. ....+++||++
T Consensus 228 ~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~--pdi~t~sK~~~-~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~ 303 (429)
T 4e77_A 228 ALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVI--PDLTCLGKIIG-GGMPVGAFGGRREVMNALAPTGPVYQAGTLSG 303 (429)
T ss_dssp HHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCC--CSEEEEEGGGG-TTSCCEEEEECHHHHTTBTTTSSBCC--CCCC
T ss_pred HHHHHcCCEEEEeccccCc-ccCcchHHHhcCCC--CCeeeeccccc-CCCCeEEEEECHHHHHHhccCCCccccCCCCC
Confidence 4899999999999999999 99998889999998 99999999995 665543 222221 22357889999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
||+++++++++|+.++++++.++++++++++++.|+++..+++.+
T Consensus 304 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 348 (429)
T 4e77_A 304 NPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIP 348 (429)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999888999999999999999999987766654
No 19
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.86 E-value=6.1e-22 Score=150.79 Aligned_cols=113 Identities=24% Similarity=0.328 Sum_probs=94.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhc-CCCCCCCEEEEchhhccCc-----cccc-ccccccc-----ccceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHF-DLEESPDIVTFSKKMQLGG-----YFLK-PEFVPQQ-----AYRVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~-g~~~~pDi~t~gK~lg~gG-----~~~~-~~~~~~~-----~~~~~~T 68 (119)
++|++||++||+||||+||||+|.+++++++ ++. ||++||||+++ +| +++. +.+.+.. +..+.+|
T Consensus 219 ~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~--~di~t~sK~l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t 295 (430)
T 3i4j_A 219 DICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVT--PDIAVLGKGLA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFT 295 (430)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCC--CSEEEECGGGT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCT
T ss_pred HHHHHcCCEEEEechhhCCCcccchhhhhhhcCCC--CcEEEEccccc-CCccccEEEEECHHHHHHHhccCCcccccCC
Confidence 4799999999999999999999998888999 988 99999999995 56 3222 2232211 1256789
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
|++||+++++++++|+.++++++.++++++.+++++.|+++.+++|.+
T Consensus 296 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 343 (430)
T 3i4j_A 296 YAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQM 343 (430)
T ss_dssp TTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred CCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 999999999999999999888899999999999999999988777743
No 20
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.86 E-value=1.6e-21 Score=149.98 Aligned_cols=106 Identities=25% Similarity=0.376 Sum_probs=90.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||++||+||||+||||+|++++++++++. ||++||||+++ || ++.+ +.+.+. .+..+.+||++||
T Consensus 251 ~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~--~Di~t~sK~l~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~ 327 (439)
T 2oat_A 251 ELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR--PDIVLLGKALS-GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNP 327 (439)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TTSSCCEEEEECHHHHTTSCTTSSCCSSTTCH
T ss_pred HHHHHcCCEEEEeccccCCccCCcchhHHHhCCC--CcEEEeccccc-CCCCCeEEEEECHHHHhccCCCCcccCCCcCH
Confidence 4899999999999999999999998888999987 99999999994 56 3332 223322 2334678999999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+.++++++.++++++++++++.|+++
T Consensus 328 ~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 363 (439)
T 2oat_A 328 LGCRVAIAALEVLEEENLAENADKLGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988889999999999999999887
No 21
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.85 E-value=6.1e-21 Score=145.54 Aligned_cols=111 Identities=19% Similarity=0.237 Sum_probs=92.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc----cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ----QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~----~~~~~~~T~~~ 71 (119)
++|++||++||+||+|+|| |+|.+++++++++. ||++||||+++ +|++.+ +.+.+. .+..+++||++
T Consensus 231 ~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~--~di~s~sK~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~ 306 (434)
T 2epj_A 231 RLSRESGALLILDEVVTGF-RLGLEGAQGYFNIE--GDIIVLGKIIG-GGFPVGAVAGSREVMSLLTPQGKVFNAGTFNA 306 (434)
T ss_dssp HHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCC--CSEEEEEGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHcCCEEEEEcchhce-eCCcchhhHHhCCC--CCeeeecchhc-CCcceeeeeecHHHHHhhccCCCcccCCCCCc
Confidence 4899999999999999999 88988888889987 99999999995 565542 223221 12346789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
||++++++.++|+.++++++.++++++++++++.|+++..+++.
T Consensus 307 ~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 350 (434)
T 2epj_A 307 HPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGL 350 (434)
T ss_dssp CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999988889999999999999999988655543
No 22
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.84 E-value=1.3e-20 Score=143.34 Aligned_cols=111 Identities=21% Similarity=0.229 Sum_probs=93.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccccc----ccccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVP----QQAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~----~~~~~~~~T~~~ 71 (119)
++|++||++||+||||+|| |+|..+..+++++. ||++||||+++ +|++++ +.+.+ .....+.+||++
T Consensus 227 ~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~--~di~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~ 302 (427)
T 3fq8_A 227 EITLEHDALLVFDEVITGF-RIAYGGVQEKFGVT--PDLTTLGKIIG-GGLPVGAYGGKREIMQLVAPAGPMYQAGTLSG 302 (427)
T ss_dssp HHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCC--CSEEEECGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHcCCEEEEecccccc-ccCcchhhHhcCCC--CChhhhhhhhh-CCcceEEEEEcHHHHHhhccCCCccccCCCCc
Confidence 4899999999999999999 99998888999998 99999999995 565442 22222 122357789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
||++++++.++|+.++++++.++++++++++++.|+++..+++.
T Consensus 303 ~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (427)
T 3fq8_A 303 NPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGH 346 (427)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999988889999999999999999998766554
No 23
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.84 E-value=7e-21 Score=145.18 Aligned_cols=111 Identities=15% Similarity=0.185 Sum_probs=93.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccccc----ccccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVP----QQAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~----~~~~~~~~T~~~ 71 (119)
++|++||++||+||||+|| |+|.+++++++++. ||++||||+++ +|++++ +.+.+ ..+..+++||++
T Consensus 228 ~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~--~di~t~sK~~~-~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~ 303 (429)
T 3k28_A 228 EVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVT--PDLTCLGKVIG-GGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSG 303 (429)
T ss_dssp HHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCC--CSEEEECGGGG-TTSCCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHcCCEEEEecccccc-ccCcchHHHHhCCC--Cceehhhhhhc-CCCCeEEEEEcHHHHhhhccCCCccccCCCCC
Confidence 4899999999999999999 99998889999998 99999999994 565543 22322 123357789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
||+++++++++|+.++ +++.++++++++++++.|+++..++|.+
T Consensus 304 ~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (429)
T 3k28_A 304 NPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIP 347 (429)
T ss_dssp CHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999887 7889999999999999999987777654
No 24
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.75 E-value=9.6e-23 Score=158.98 Aligned_cols=111 Identities=15% Similarity=0.180 Sum_probs=94.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc-cc-----cceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ-QA-----YRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~-~~-----~~~~~T~ 69 (119)
++|++||++||+||||+ | |+|.+++++++++. ||++||||++| +|++++ +.+++. .+ ..+++||
T Consensus 261 ~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~--pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~ 335 (465)
T 2yky_A 261 AEASRCGALLIFDEVMT-S-RLSGGGAQEMLGIS--ADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPARDGAFAHAGTF 335 (465)
Confidence 58999999999999999 6 99999999999998 99999999995 565442 333332 12 2577899
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
++||+++++++++|++++++++++++++++++|+++|+++.+++|.+
T Consensus 336 ~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 382 (465)
T 2yky_A 336 NNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAP 382 (465)
Confidence 99999999999999999988999999999999999999998777653
No 25
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.84 E-value=1.3e-20 Score=141.69 Aligned_cols=112 Identities=25% Similarity=0.299 Sum_probs=94.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccc-cc-ccccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEF-VP-QQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~-~~-~~~~~~~~T~~~~p 73 (119)
++|++||++||+||||+||||+|.++.++++++. ||++||||+++ +|+.++ +.+ .+ ..+..+.+||++||
T Consensus 207 ~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~--~d~~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (395)
T 3nx3_A 207 KLCDEKDILLIADEIQCGMGRSGKFFAYEHAQIL--PDIMTSAKALG-CGLSVGAFVINQKVASNSLEAGDHGSTYGGNP 283 (395)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGT-TTSCCEEEEECHHHHHHHSCTTCCSSCBSCCH
T ss_pred HHHHHcCCEEEEEecccCCCcCCcchhHHhcCCC--CCEEEeccccc-CCCceEEEEEchhhhhhhcCCcccCCCCCCCH
Confidence 4799999999999999999999998888999988 99999999994 555332 233 33 23345678999999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 74 GKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
++++++.++|+.++++++.++++++.+++++.|+++..++|.
T Consensus 284 ~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (395)
T 3nx3_A 284 LVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDF 325 (395)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999988889999999999999999998777764
No 26
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.84 E-value=1.4e-20 Score=143.50 Aligned_cols=111 Identities=25% Similarity=0.414 Sum_probs=93.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc-cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ-QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~-~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||+|+||||+|.++..+++++. ||+++|||+++ +|+.++ +.+.+. .+..+.+|| +||+
T Consensus 229 ~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~--~di~s~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~~t~-~~~~ 304 (439)
T 3dxv_A 229 DICRAHGILVVCDEVKVGLARSGRLHCFEHEGFV--PDILVLGKGLG-GGLPLSAVIAPAEILDCASAFAMQTLH-GNPI 304 (439)
T ss_dssp HHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCC--CSEEEECGGGG-TTSCCEEEEEEHHHHTSCSSSSCCTTT-TCHH
T ss_pred HHHHHcCCEEEEeccccCCCcCchhhHHHhcCCC--CCEEEEcchhc-CCcceEEEEECHHHHhhhcCCCcCCCc-ccHH
Confidence 4899999999999999999999998888999988 99999999995 565332 223322 233567899 9999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
++++++++|+.++++++.++++++.+++++.|+++..++|.
T Consensus 305 ~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 345 (439)
T 3dxv_A 305 SAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPL 345 (439)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999988889999999999999999998777764
No 27
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.83 E-value=2.9e-20 Score=141.39 Aligned_cols=111 Identities=23% Similarity=0.195 Sum_probs=92.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc----cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ----QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~----~~~~~~~T~~~ 71 (119)
++ ++||++||+||+|+|| |+|.+++++++++. ||++||||+++ +|++.+ +.+.+. ....+++||++
T Consensus 227 ~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~--~di~s~sK~l~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~ 301 (424)
T 2e7u_A 227 EA-KAYGVLLIADEVMTGF-RLAFGGATELLGLK--PDLVTLGKILG-GGLPAAAYAGRREIMEKVAPLGPVYQAGTLSG 301 (424)
T ss_dssp HG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCC--CSEEEECGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTCS
T ss_pred HH-HHcCCEEEEecCcccc-ccchhHHHHHhCCC--cchhhhhhhhh-CCcceEEEEEcHHHHhhhcccCCcccCCCCCC
Confidence 46 8999999999999999 88988888889988 99999999995 565543 223221 22346789999
Q ss_pred CHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy4800 72 DPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGLGQESNLQ 116 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l~~~~p~i 116 (119)
||++++++.++|+.+++ +++.+++++++++++++|+++.+++|.+
T Consensus 302 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (424)
T 2e7u_A 302 NPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLP 347 (424)
T ss_dssp CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999988 8899999999999999999987666653
No 28
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.83 E-value=1.1e-20 Score=143.80 Aligned_cols=112 Identities=26% Similarity=0.382 Sum_probs=91.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc---cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ---QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~---~~~~~~~T~~~~ 72 (119)
++|++||++||+||||+||||+|.+++++++++. ||+++|||+++ +|+.++ +.+.+. ....+.+|+++|
T Consensus 231 ~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~--~di~s~sK~~~-~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~ 307 (433)
T 1zod_A 231 RKCEARGMLLILDEAQTGVGRTGTMFACQRDGVT--PDILTLSKTLG-AGLPLAAIVTSAAIEERAHELGYLFYTTHVSD 307 (433)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC--CSEEEECHHHH-TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTC
T ss_pred HHHHHhCCEEEEeccccCCCcCchHhHHhhcCCC--CCEEEeccccc-CCCCeeEEEEhHHHHHhhccCCCCCCCCCCcC
Confidence 4799999999999999999999988888888987 99999999995 454332 223221 112344899999
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 73 PGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
|++++++.++|+.++++++.+++++++++++++|+++..++|.
T Consensus 308 ~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 350 (433)
T 1zod_A 308 PLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDC 350 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999988889999999999999999988666664
No 29
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.83 E-value=2e-20 Score=142.75 Aligned_cols=112 Identities=21% Similarity=0.367 Sum_probs=90.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc-cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ-QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~-~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||+|+||||+|++++++.+++. ||++||+|+++ +|++.+ +.+.+. .+..+.+||++||+
T Consensus 229 ~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~--~diit~sK~l~-~G~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~ 305 (420)
T 2pb2_A 229 DLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVT--PDILTSAKALG-GGFPVSAMLTTQEIASAFHVGSHGSTYGGNPL 305 (420)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC--CSEEEECGGGG-TTSCCEEEEECHHHHTTCC----CCEECCCHH
T ss_pred HHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCC--CCeEEeccccc-CCCceEEEEEhHHHHHhhcCCCcCcccCcCHH
Confidence 4799999999999999999999998878888987 99999999995 665432 233322 22346789999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+++++.++|+.++++++.++++++++++++.|+++..++|.
T Consensus 306 ~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 346 (420)
T 2pb2_A 306 ACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDI 346 (420)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999988889999999999999999987544553
No 30
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.82 E-value=7.1e-20 Score=140.45 Aligned_cols=110 Identities=19% Similarity=0.277 Sum_probs=86.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----cccccc-cc-----cceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVPQ-QA-----YRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~~-~~-----~~~~~T~ 69 (119)
++|++||++||+||+|+|| |+|.+++++++++. ||+++|||+++ +|++.+ +.+.+. .+ ..+++||
T Consensus 229 ~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~--~di~s~sK~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~ 304 (453)
T 2cy8_A 229 ELARQYGALFILDEVISGF-RVGNHGMQALLDVQ--PDLTCLAKASA-GGLPGGILGGREDVMGVLSRGSDRKVLHQGTF 304 (453)
T ss_dssp HHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCC--CSEEEEEGGGG-TTSSCEEEEECHHHHTTSSSCC---------C
T ss_pred HHHHHcCCEEEEecCcccc-ccCchhhhHHhCCC--CcEEEEChhhh-CCcceEEEechHHHHHHhccccCCCceeCCCC
Confidence 4899999999999999999 89988888889987 99999999994 555432 223221 11 2467899
Q ss_pred CCCHHHHHHHHHHHHH-HhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 70 MGDPGKVLLLKGIIDT-IHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~-i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
++||++++++.++|+. + ++++.+++++++++++++|+++..++|.
T Consensus 305 ~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 350 (453)
T 2cy8_A 305 TGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKGL 350 (453)
T ss_dssp CCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999998 8 7789999999999999999988655654
No 31
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.81 E-value=1.2e-19 Score=138.96 Aligned_cols=111 Identities=20% Similarity=0.285 Sum_probs=89.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-cccc-----cccccc-c---------ccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFLK-----PEFVPQ-Q---------AYR 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~~-----~~~~~~-~---------~~~ 64 (119)
++|++||++||+||||+||||+|.++.++++++. ||+++|||+++ +| ++.+ +.+.+. . ...
T Consensus 247 ~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~--~di~s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~ 323 (449)
T 3a8u_X 247 EICNQHNILLVFDEVITGFGRTGSMFGADSFGVT--PDLMCIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFP 323 (449)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCC--CSEEEECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSC
T ss_pred HHHHHhCCEEEEeccccCccccCcchhhhhcCCC--CCEEEEccccc-CCCCceEEEEECHHHHHHhhccCccccccccc
Confidence 4899999999999999999999988788888987 99999999995 56 3332 222211 1 114
Q ss_pred eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+.+||.+||++++++.++|+.++++++.+++++++++++++|+++ .++|.
T Consensus 324 ~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~ 373 (449)
T 3a8u_X 324 HGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAKN 373 (449)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTSTT
T ss_pred ccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence 567999999999999999999988889999999999999999884 33553
No 32
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.79 E-value=2.4e-19 Score=136.35 Aligned_cols=111 Identities=23% Similarity=0.323 Sum_probs=88.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-ccc----c-cccccc-c----cc-ceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-YFL----K-PEFVPQ-Q----AY-RVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-~~~----~-~~~~~~-~----~~-~~~~T 68 (119)
++|++||++||+||+|+||||+|..+.++++++. ||++||||+++ || +.+ . +.+.+. . .. .+.+|
T Consensus 233 ~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~--~d~~t~sK~l~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t 309 (429)
T 1s0a_A 233 KICDREGILLIADEIATGFGRTGKLFACEHAEIA--PDILCLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPT 309 (429)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCT
T ss_pred HHHHHcCCEEEEeehhhCCcccchHHHhhhcCCC--CCEEEeccccc-CCCccceEEEeCHHHHHHhhcCCCcccccCCC
Confidence 4799999999999999999999987777888887 99999999995 55 332 2 222221 1 11 25578
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
+++||++++++.++|+.++++++.++++++.++++++|+++.. +|.
T Consensus 310 ~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~ 355 (429)
T 1s0a_A 310 FMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEM 355 (429)
T ss_dssp TTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CTT
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 9999999999999999998878889999999999999988643 554
No 33
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.77 E-value=1.5e-18 Score=132.13 Aligned_cols=103 Identities=30% Similarity=0.441 Sum_probs=81.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-----ccc-ccccccccccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-----YFL-KPEFVPQQAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-----~~~-~~~~~~~~~~~~~~T~~~~p~ 74 (119)
++|++||++||+||||+||||+|..++.+++++. ||++||||+++ +| ++. .+.+. .....+.+||++||+
T Consensus 240 ~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~--~d~~t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 240 KLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTV--PDVITLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHH
T ss_pred HHHHHcCCEEEEeccccCCccCcchhhHHhcCCC--CCEEEeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHH
Confidence 4799999999999999999999987777888887 99999999995 45 332 23333 222356679999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++.++|+.+++ +.++++++.++|++.|+++
T Consensus 316 ~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 316 ACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh
Confidence 99999999998865 8889999999999999775
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.77 E-value=2.7e-18 Score=129.82 Aligned_cols=113 Identities=25% Similarity=0.399 Sum_probs=91.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCCCHHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMGDPGK 75 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~~p~~ 75 (119)
++|++||+++|+||+|+|||++|.++..+.+++. ||+++|||+++.| |++.. +.+.+. ....+.+|++.||++
T Consensus 227 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~di~s~sK~~~~GlriG~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (426)
T 1sff_A 227 ALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVA--PDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIA 304 (426)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSC--CSEEEECGGGGTSSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHH
T ss_pred HHHHHcCCEEEEechhhccCcccchhhhhhcCCC--CCEEEEcccccCCCceEEEEEcHHHHhhhccCCcCcCCCCCHHH
Confidence 4799999999999999999999987777778877 9999999999643 33332 233322 222456788999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 76 VLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 76 ~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
++++.++|+.++++++.++++++.++++++|+++...+|.
T Consensus 305 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 344 (426)
T 1sff_A 305 CVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPE 344 (426)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999988889999999999999999987655653
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=8.6e-18 Score=126.02 Aligned_cols=106 Identities=21% Similarity=0.307 Sum_probs=88.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCc-----cccc-ccccc-ccccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGG-----YFLK-PEFVP-QQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG-----~~~~-~~~~~-~~~~~~~~T~~~~p 73 (119)
++|++||+++|+||+|+|||++|.++..+.+++. ||++||||+|+ || ++.. +.+.+ ..+..+.+||+.||
T Consensus 210 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~d~~~~SK~l~-gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (392)
T 3ruy_A 210 EVCKKENVLFVADEIQTGLGRTGKVFACDWDNVT--PDMYILGKALG-GGVFPISCAAANRDILGVFEPGSHGSTFGGNP 286 (392)
T ss_dssp HHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TTTSCCEEEEECHHHHTTCCTTSSCCSSTTCH
T ss_pred HHHHHcCCEEEEeechhCCCccccchhhhccCCC--CCEEEEchhhh-CChhhhEEEEECHHHHhhhccCCcCCCCCCCH
Confidence 4799999999999999999999998888888887 99999999994 44 3332 22332 22345667889999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+.++++++.++++++.+++++.|+++
T Consensus 287 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 287 LACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987889999999999999999876
No 36
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.74 E-value=6.2e-18 Score=126.99 Aligned_cols=110 Identities=23% Similarity=0.376 Sum_probs=90.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccccc-----ccccc-ccccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLK-----PEFVP-QQAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~~-----~~~~~-~~~~~~~~T~~~~p~ 74 (119)
++|++||+++|+||+|+|||++|..+..+.+++. ||++||+|+++ +|+..+ +.+.+ ..+..+.+|+++||+
T Consensus 211 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~d~~t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (406)
T 4adb_A 211 ELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVT--PDLLTTAKALG-GGFPVGALLATEECARVMTVGTHGTTYGGNPL 287 (406)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC--CSEEEECGGGG-TTSCCEEEEECHHHHHTCCTTSSCCSSTTCHH
T ss_pred HHHHHcCCEEEEeccccCCCccchhHHHHhcCCC--CCEEEechhhc-CCCCeEEEEEcHHHHhhhccCCcCCCCCCCHH
Confidence 4799999999999999999999998888888988 99999999996 553332 22332 223346778899999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcC
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQES 113 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~ 113 (119)
+++++.++|+.++++++.++++++.+++++.|+++...+
T Consensus 288 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 326 (406)
T 4adb_A 288 ASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRY 326 (406)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999878889999999999999999875444
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.68 E-value=3.1e-16 Score=117.88 Aligned_cols=111 Identities=23% Similarity=0.330 Sum_probs=88.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcccc-----ccccccccccceeeccCCCHHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFL-----KPEFVPQQAYRVFNTWMGDPGK 75 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~-----~~~~~~~~~~~~~~T~~~~p~~ 75 (119)
++|++||+++|+||+|+|+++.|..+..+.+++. ||+++|+|+++ +|+.. .+.+.......+..|+..||++
T Consensus 211 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~d~~s~sK~~~-~G~r~G~~~~~~~~~~l~~~~~~~~~~~~~~~ 287 (397)
T 2ord_A 211 KLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVV--PDVLTTAKGLG-GGVPIGAVIVNERANVLEPGDHGTTFGGNPLA 287 (397)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCC--CSEEEECGGGG-TTSCCEEEEECSTTCCCCTTSSCCSSTTCHHH
T ss_pred HHHHHcCCEEEEEecccCCccCccchhhhhhCCC--CCeeeeccccC-CCcCeEEEEEchHhcccCCCCcCCCCCCCHHH
Confidence 4799999999999999999999887666777876 99999999995 54432 2333311222456788999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4800 76 VLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESN 114 (119)
Q Consensus 76 ~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~p 114 (119)
++++.++|+.++++++.++++++.+++++.|+++...+|
T Consensus 288 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (397)
T 2ord_A 288 CRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYD 326 (397)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999998778899999999999999988743444
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.60 E-value=3.8e-15 Score=111.71 Aligned_cols=107 Identities=27% Similarity=0.399 Sum_probs=84.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCcccc-----ccccccc-cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFL-----KPEFVPQ-QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~~-----~~~~~~~-~~~~~~~T~~~~p~ 74 (119)
++|++||+++|+||+|+|||+.|..+..+..++. ||+++|+|+++ +|+.. .+.+.+. ....+.+|+..||+
T Consensus 213 ~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~--~d~~s~sK~~~-~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (395)
T 1vef_A 213 EITQEKGALLILDEIQTGMGRTGKRFAFEHFGIV--PDILTLAKALG-GGVPLGVAVMREEVARSMPKGGHGTTFGGNPL 289 (395)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC--CSEEEECGGGG-TTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHH
T ss_pred HHHHHcCCEEEEEecccCCccCCchhHhhhcCCC--CCEEEEccccc-CCCceEEEEehHHHHhhhccCCcCCCcCCCHH
Confidence 4799999999999999999998887666777877 99999999995 34322 2233222 12235678889999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
+++++.++|+.++++++.++++++.+++++.|+++.
T Consensus 290 ~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~ 325 (395)
T 1vef_A 290 AMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP 325 (395)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998877788999999999999998763
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.56 E-value=2e-14 Score=106.80 Aligned_cols=104 Identities=30% Similarity=0.450 Sum_probs=81.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccCccc----c-ccccccc-cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYF----L-KPEFVPQ-QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~gG~~----~-~~~~~~~-~~~~~~~T~~~~p~ 74 (119)
++|++||+++|+||+|++||+.+..+..+.++.. ||+++|||.++ +|+. . .+.+.+. .+..+..|++.+|+
T Consensus 200 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~d~~s~SK~~~-~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (375)
T 2eh6_A 200 EICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLK--PDVIALAKGLG-GGVPIGAILAREEVAQSFTPGSHGSTFGGNPL 276 (375)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC--CSEEEECGGGG-TTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHH
T ss_pred HHHHHhCCEEEEeccccCCCCCCcchhhhhcCCC--CCEEEEccccc-CCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHH
Confidence 4799999999999999999988876566677766 99999999995 4432 2 2233322 22235667888999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++.++|+.++ +..++++++.+++++.|+++
T Consensus 277 ~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 309 (375)
T 2eh6_A 277 ACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKEL 309 (375)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 67788999999999999875
No 40
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.50 E-value=7.4e-14 Score=106.34 Aligned_cols=107 Identities=24% Similarity=0.266 Sum_probs=80.2
Q ss_pred ChhhhhCCEEEEcccccc--ccCCCcchhhhhcCCCCCCC--EEEEchhhc-cCcccccc-ccccc----cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTG--GGPCGKFWCHEHFDLEESPD--IVTFSKKMQ-LGGYFLKP-EFVPQ----QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG--~Gr~G~~~~~~~~g~~~~pD--i~t~gK~lg-~gG~~~~~-~~~~~----~~~~~~~T~~ 70 (119)
++|++||++||+||+|++ ++++|.+ ..+++++...+| +.+|+|++| .||++..+ .+.+. .+.+.+ |++
T Consensus 218 ~l~~~~g~~li~Dea~~~~~~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~-~~~ 295 (427)
T 2w8t_A 218 AVAKKHGAMVLVDEAHSMGFFGPNGRG-VYEAQGLEGQIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIF-TAS 295 (427)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTTSCC-HHHHTTCTTCCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHS-SCC
T ss_pred HHHHHcCCEEEEECCccccccCCCCCc-hHhhcCCCcCCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccc-cCC
Confidence 479999999999999985 4555555 456678762234 459999997 57777643 34332 122233 558
Q ss_pred CCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
.||+.++++.++|+.+++ ++++++++++.+++++.|+++
T Consensus 296 ~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 296 LPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp CCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999876 678899999999999999886
No 41
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.49 E-value=3.6e-14 Score=107.08 Aligned_cols=107 Identities=20% Similarity=0.184 Sum_probs=81.0
Q ss_pred ChhhhhCCEEEEcccccc--ccCCCcchhhhhcCCCCCCCE--EEEchhhc-cCcccccc-ccccc----cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTG--GGPCGKFWCHEHFDLEESPDI--VTFSKKMQ-LGGYFLKP-EFVPQ----QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG--~Gr~G~~~~~~~~g~~~~pDi--~t~gK~lg-~gG~~~~~-~~~~~----~~~~~~~T~~ 70 (119)
++|++||++||+||+|++ +|++|..+. +.+++...+|+ .+++|+++ +||++..+ .+.+. .....+++ .
T Consensus 210 ~la~~~~~~li~De~~~~g~~g~~g~~~~-~~~~~~~~~di~~~s~sK~~~~~gg~v~~~~~~~~~~~~~~~~~~~~~-~ 287 (409)
T 3kki_A 210 NISKEFGCALLVDESHSLGTHGPNGAGLL-AELGLTREVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFISYPAIFSS-T 287 (409)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCHH-HHHTCGGGCSEEEEESSSTTCSSCEEEEESSSGGGTHHHHCHHHHHSB-C
T ss_pred HHHHHcCCEEEEECCccccccCCCCCcch-hhcCCCCCCCEEEeecchhhCCCceEEEECHHHHHHHHHhCcCccccC-C
Confidence 479999999999999987 888887655 55676434888 58999997 56666543 23321 12223344 5
Q ss_pred CCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|++++++.++++.+++ ++++++++++.+++++.|+++
T Consensus 288 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 288 LLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 789999999999999876 467788999999999999876
No 42
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.35 E-value=9e-13 Score=99.95 Aligned_cols=107 Identities=13% Similarity=0.069 Sum_probs=71.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hh-----hhcCCCCCCCEEEEchhhccCcc----ccc--cccccc-cccc-ee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CH-----EHFDLEESPDIVTFSKKMQLGGY----FLK--PEFVPQ-QAYR-VF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~-----~~~g~~~~pDi~t~gK~lg~gG~----~~~--~~~~~~-~~~~-~~ 66 (119)
++|++||++||+||+|++++++|... .. +..+.. +++.+++|+++.+|+ +.. +.+.+. .+.. ..
T Consensus 221 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~ 298 (421)
T 3l8a_A 221 ELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFT--IILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN 298 (421)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTE--EEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcE--EEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence 47999999999999999998888521 11 122333 678899999963443 322 233321 1112 23
Q ss_pred eccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++||++++++.++++..++ ++..++++++.+++++.|+++
T Consensus 299 ~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (421)
T 3l8a_A 299 NQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAK 343 (421)
T ss_dssp TCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4568999999999999986432 345566777777777777664
No 43
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.32 E-value=2.7e-12 Score=96.27 Aligned_cols=107 Identities=26% Similarity=0.265 Sum_probs=77.7
Q ss_pred ChhhhhCCEEEEccccc-c-ccCCCcchhhhhcCCCCCCCEE--EEchhhc-cCccccccc-ccc----ccccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQT-G-GGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LGGYFLKPE-FVP----QQAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G-~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~gG~~~~~~-~~~----~~~~~~~~T~~ 70 (119)
++|++||+++|+||+|+ | +|+.|.++. ...++...+|++ +|+|+++ .||++..+. +.+ ....+.+++ +
T Consensus 202 ~l~~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~~~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~-~ 279 (401)
T 2bwn_A 202 DIAEEFGALTYIDEVHAVGMYGPRGAGVA-ERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFST-S 279 (401)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSTTSCCHH-HHHTCGGGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSB-C
T ss_pred HHHHHcCCEEEEeccccccccCCCCceee-eccCccccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCceecC-C
Confidence 47999999999999998 4 677776654 555653225655 9999997 578876432 221 122223334 5
Q ss_pred CCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|++++++.++++.+++. +..++++++.+++++.|+++
T Consensus 280 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 280 LPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 5788999999999998763 67788999999999999886
No 44
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.25 E-value=1e-11 Score=92.57 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=76.5
Q ss_pred ChhhhhCCEEEEccccc-cc-cCCCcchhhhhcCCCCCCCEE--EEchhhc-cCcccccc-ccccc---cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQT-GG-GPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LGGYFLKP-EFVPQ---QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~-Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~gG~~~~~-~~~~~---~~~~~~~T~~~ 71 (119)
++|++||+++|+||+|. |+ +++|.... +.++.. ||++ +++|.++ .||++..+ .+.+. ....+..|+..
T Consensus 192 ~l~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~--~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~ 268 (384)
T 1bs0_A 192 QVTQQHNGWLMVDDAHGTGVIGEQGRGSC-WLQKVK--PELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSM 268 (384)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSGGGCCHH-HHTTCC--CSEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCC
T ss_pred HHHHHcCcEEEEECCcccceecCCCCchH-HhcCCC--CcEEEeeccchhhccCcEEEeCHHHHHHHHHhchhhhcCCCC
Confidence 47999999999999984 53 55665433 556655 9988 9999997 46776543 23221 11112233478
Q ss_pred CHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
||+.++++.++|+.+++ ++..++++++.+++.+.|+++
T Consensus 269 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (384)
T 1bs0_A 269 PPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL 309 (384)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998873 367788889999999998775
No 45
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.23 E-value=1.7e-11 Score=91.73 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=78.8
Q ss_pred ChhhhhCCEEEEcccc-ccc-cCCCcchhhhhcCCCCCCCEE--EEchhh-c-cCcccccc-cccccc---ccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQ-TGG-GPCGKFWCHEHFDLEESPDIV--TFSKKM-Q-LGGYFLKP-EFVPQQ---AYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~-tG~-Gr~G~~~~~~~~g~~~~pDi~--t~gK~l-g-~gG~~~~~-~~~~~~---~~~~~~T~~ 70 (119)
++|++||+++|+||++ .|+ ++.|..+ .+..++...+|++ +++|++ | .||++..+ .+.+.. ...+..|++
T Consensus 201 ~l~~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~~~~l~~~~~~~~~~~~ 279 (401)
T 1fc4_A 201 DLADKYDALVMVDDSHAVGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS 279 (401)
T ss_dssp HHHHHTTEEEEEECTTTTTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCC
T ss_pred HHHHHcCCEEEEECcccccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHHHHHHHHhCcCceeCCC
Confidence 4799999999999999 487 5667653 4456665235888 999999 4 46766543 232211 111223558
Q ss_pred CCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
.|+++++++.++|+.+++ +++.++++++.+++++.|+++
T Consensus 280 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 280 LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999864 577888999999999999876
No 46
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.22 E-value=2.9e-11 Score=90.09 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=78.0
Q ss_pred ChhhhhCCEEEEcccc-ccc-cCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc-cccc----ccccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQ-TGG-GPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP-EFVP----QQAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~-tG~-Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~-~~~~----~~~~~~~~T~ 69 (119)
++|++||+++|+||++ .|+ ++.|.. ..+.+++...||++ +++|+++ .||++..+ .+.+ ....+.+ +.
T Consensus 199 ~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~-~~ 276 (399)
T 3tqx_A 199 DLADKYNALVMVDDSHAVGFIGENGRG-TPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLF-SN 276 (399)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTTSCC-HHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHS-SC
T ss_pred HHHHHcCCEEEEECCccccccCCCCCc-hHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceec-cC
Confidence 4799999999999999 464 666654 55667763348998 9999985 25665543 2222 1122222 33
Q ss_pred CCCHHHHHHHHHHHHHH-h-hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTI-H-NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i-~-~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+|+.++++.++++.+ + .++..++++++.+++++.|+++
T Consensus 277 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 277 TVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 78999999999999988 4 2567888999999999999887
No 47
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.21 E-value=2.7e-11 Score=89.99 Aligned_cols=106 Identities=16% Similarity=0.078 Sum_probs=70.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC---cccccc-ccccc-cccceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~~~p~ 74 (119)
++|++||+++|+||+++++++.+.....+.++.. +++.+|+|+++ .| |++..+ .+.+. ......+++..+++
T Consensus 181 ~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~ 258 (375)
T 3op7_A 181 EIASEVGAYILSDEVYRSFSELDVPSIIEVYDKG--IAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVF 258 (375)
T ss_dssp HHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTE--EEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHH
T ss_pred HHHHHcCCEEEEEcccccccccCCCchhhhcCCE--EEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcH
Confidence 4799999999999999987665444444556655 78889999996 33 454432 23322 22334567788999
Q ss_pred HHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 75 KVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 75 ~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
+.+++.++++..++ ++..++++++.+++.+.|++
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (375)
T 3op7_A 259 DDLVAQLALAHYQEILERNRHILEENLAILDQWIEE 294 (375)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999988886432 23344456666666666655
No 48
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.13 E-value=8.4e-11 Score=88.04 Aligned_cols=108 Identities=22% Similarity=0.321 Sum_probs=76.5
Q ss_pred ChhhhhCCEEEEccccc-c-ccCCCcchhhhhcCCCCCCCEE--EEchhhc-cCcccccc-cccccc-c--cceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQT-G-GGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LGGYFLKP-EFVPQQ-A--YRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G-~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~gG~~~~~-~~~~~~-~--~~~~~T~~~ 71 (119)
++|++||+++|+||++. | +++.+... .+.+++.+.||++ +++|.++ .||++..+ .+.+.. . ..+..+...
T Consensus 197 ~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (398)
T 3a2b_A 197 SIANEFDAAVMVDDAHSLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASM 275 (398)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCSSCEEEEECHHHHHHHHHHCHHHHSSBCC
T ss_pred HHHHHcCcEEEEECCCcccccCCCCCch-HhhcCCCcCCeEEEecccccccCCCcEEEeCHHHHHHHHHhcccceecCCC
Confidence 47999999999999985 4 45555543 4445654347888 9999997 36887643 232211 1 123345578
Q ss_pred CHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
+|+.++++.++|+.++. ++..++++++.+++.+.|+++
T Consensus 276 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 276 TPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc
Confidence 89988888888988754 367788999999999999876
No 49
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.12 E-value=5.7e-11 Score=88.00 Aligned_cols=107 Identities=11% Similarity=-0.001 Sum_probs=70.9
Q ss_pred ChhhhhCCEEEEccccccccCCC-c----chhhhhcCCCCCCCEEEEchhhccC----cccc--ccccccc-cccceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG-K----FWCHEHFDLEESPDIVTFSKKMQLG----GYFL--KPEFVPQ-QAYRVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G-~----~~~~~~~g~~~~pDi~t~gK~lg~g----G~~~--~~~~~~~-~~~~~~~T 68 (119)
++|++||+++|+||+|+++.+.| . .......+.. +++.+++|++|.+ |+++ .+.+.+. .......+
T Consensus 177 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 254 (377)
T 3fdb_A 177 DLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC--ITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIK 254 (377)
T ss_dssp HHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE--EEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHH
T ss_pred HHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE--EEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhc
Confidence 36999999999999999887777 2 2222223333 5677999999633 4322 2233321 12234457
Q ss_pred cCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++.|+++++++.++|+..++ ++..++++++.+++.+.|++.
T Consensus 255 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (377)
T 3fdb_A 255 DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR 297 (377)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999886432 345667778888888888764
No 50
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.09 E-value=7.6e-11 Score=89.19 Aligned_cols=107 Identities=11% Similarity=-0.051 Sum_probs=68.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhh----hcCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHE----HFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~----~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~ 69 (119)
++|++||+++|+||+++++++.|... ... ..+.. +++.+++|.++ .| |++.. +.+.+. .......|+
T Consensus 209 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 286 (429)
T 1yiz_A 209 NLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERT--ITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVY 286 (429)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGE--EEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCce--EEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhccc
Confidence 47999999999999999887666421 111 22333 56779999996 33 44332 223221 122334577
Q ss_pred CCCHHHHHHHHHHHHH-----Hhhhc----HHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDT-----IHNEN----LLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~-----i~~~~----~~~~~~~~g~~l~~~L~~l 109 (119)
+.|+++++++.++|+. ...++ ..++++++.+++.+.|+++
T Consensus 287 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 287 TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8899999999999987 42233 3445666667777777654
No 51
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.07 E-value=6.3e-11 Score=89.10 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=69.9
Q ss_pred ChhhhhCCEEEEccccccccCCC---cchhhhhcCCCCCCC----EEEEchhhcc-C---ccccc---c-c----ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG---KFWCHEHFDLEESPD----IVTFSKKMQL-G---GYFLK---P-E----FVPQQ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G---~~~~~~~~g~~~~pD----i~t~gK~lg~-g---G~~~~---~-~----~~~~~ 61 (119)
++|++||+++|+||+++++++.| .......+... +| +.+++|++|. | |++.. + . +....
T Consensus 210 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~ 287 (412)
T 1ajs_A 210 SVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE--GFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 287 (412)
T ss_dssp HHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT--TCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEcccccccCCcccccchHHHHHhcc--CCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHH
Confidence 47999999999999999998776 33333323212 44 4499999963 3 44443 2 2 22211
Q ss_pred ccceeeccC-CCHHHHHHHHHHHHHHh------h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 AYRVFNTWM-GDPGKVLLLKGIIDTIH------N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~~~~~~T~~-~~p~~~a~a~a~l~~i~------~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+..++. .|+++++++.++|+... + ++..++++++.+++.+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1ajs_A 288 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp HHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 112334555 58899999988887542 1 356677888888888888775
No 52
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.06 E-value=1.9e-10 Score=87.40 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=69.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhhhcCCCCCCCEE---EEchhhccC----cccccc--------ccccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHEHFDLEESPDIV---TFSKKMQLG----GYFLKP--------EFVPQQAYR 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~~~g~~~~pDi~---t~gK~lg~g----G~~~~~--------~~~~~~~~~ 64 (119)
++|++||+++|+||++++|++.|..+ ....++.. ++++ +|+|.++.. |++... .+.......
T Consensus 218 ~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~--~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~ 295 (427)
T 3dyd_A 218 AVAARQCVPILADEIYGDMVFSDCKYEPLATLSTD--VPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKL 295 (427)
T ss_dssp HHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSS--CCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCC--CcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHH
Confidence 47999999999999999998877633 33444544 6666 899986533 444322 122111112
Q ss_pred eeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+++.++++++++.++|+.... ++..++++++.+++.+.|+++
T Consensus 296 ~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (427)
T 3dyd_A 296 SQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAI 343 (427)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 223678899999999999985332 234556667777777777654
No 53
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.06 E-value=1.8e-10 Score=85.71 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=70.5
Q ss_pred ChhhhhCCEEEEccccccc--cCCCcchhhhhcCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGG--GPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~--Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||+++++ |+.+........+.. +++.+++|.++ .| |++.. +.+.+. .....+.+++.+
T Consensus 179 ~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~--~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 256 (381)
T 1v2d_A 179 RLARAHDLFLISDEVYDELYYGERPRRLREFAPERT--FTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAP 256 (381)
T ss_dssp HHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTE--EEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCC
T ss_pred HHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCE--EEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCC
Confidence 4799999999999999876 333222111123444 67779999986 23 44443 233321 112234567789
Q ss_pred HHHHHHHHHHHHHH--hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTI--HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i--~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++++.++|+.. ++ ++..++++++.+++.+.|++.
T Consensus 257 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 257 TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999876 32 346677888888888888774
No 54
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.04 E-value=3.1e-10 Score=84.61 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=68.9
Q ss_pred ChhhhhCCEEEEccccccccCCCc-chhhhhc-CCCCCCCEE--EEchhhc-cC---cccccc-ccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK-FWCHEHF-DLEESPDIV--TFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~-~~~~~~~-g~~~~pDi~--t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+++++...|. ......+ +.. .+|++ +++|.+| .| |++..+ .+.+. .......+++
T Consensus 187 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 265 (389)
T 1gd9_A 187 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMF-ERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATC 265 (389)
T ss_dssp HHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCG-GGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCC-CCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhccC
Confidence 479999999999999998766654 2222222 211 24544 8999996 33 454432 23221 1122334667
Q ss_pred CCHHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN----ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~----~~~~~~~~~~g~~l~~~L~~l 109 (119)
.++++.+++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 266 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 266 PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 889999998888876443 345566777888888888775
No 55
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.02 E-value=3.2e-10 Score=86.30 Aligned_cols=109 Identities=10% Similarity=-0.047 Sum_probs=69.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC--CCCCEEEEchhhc-cC---ccccc-cccccc---------ccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE--ESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ---------QAY 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~--~~pDi~t~gK~lg-~g---G~~~~-~~~~~~---------~~~ 63 (119)
++|++||+++|+||+|++|+..|.. .....+... ..+++.+|+|++| .| |++.. +.+.+. ...
T Consensus 236 ~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 315 (449)
T 3qgu_A 236 NFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV 315 (449)
T ss_dssp HHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHH
Confidence 3799999999999999988666531 122222111 0145669999997 44 55543 233321 111
Q ss_pred ceeeccCCCHHHHHHHHHHHHHHh---hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 RVFNTWMGDPGKVLLLKGIIDTIH---NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 ~~~~T~~~~p~~~a~a~a~l~~i~---~~~~~~~~~~~g~~l~~~L~~l 109 (119)
....+++.++++.+++.++++... -++..++++++.+++++.|+++
T Consensus 316 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 316 MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp HHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 123344789999999988887521 1356677888888899888875
No 56
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.00 E-value=2.5e-10 Score=84.78 Aligned_cols=108 Identities=9% Similarity=-0.025 Sum_probs=71.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCCCCCC----EEEEchhhc-cC---ccccc--ccccccc-cc-ceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLEESPD----IVTFSKKMQ-LG---GYFLK--PEFVPQQ-AY-RVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~~~pD----i~t~gK~lg-~g---G~~~~--~~~~~~~-~~-~~~~ 67 (119)
++|++||+++|+||+|+++.+.|.. .....++. ..|| +.+++|++| .| |++.. +.+.+.. .. ....
T Consensus 187 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 265 (391)
T 3dzz_A 187 ELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDW-DAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAG 265 (391)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCT-TTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEEecccccccCCCCCceehhhcCc-cccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhc
Confidence 4799999999999999988777752 23333321 1277 458999986 34 55443 2333221 11 1234
Q ss_pred ccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++.|+++++++.++++..++ ++..++++++.+++.+.|++.
T Consensus 266 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (391)
T 3dzz_A 266 IGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE 309 (391)
T ss_dssp CSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567899999999999887432 345666777888888888763
No 57
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.98 E-value=3.2e-10 Score=85.43 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=68.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhc----CCCCCCCEEEEchhhc-cC---cccccc-ccccc-cccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHF----DLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~----g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~ 69 (119)
++|++||+++|+||+|+++.+.|.. .....+ +.. +.+.+++|.+| .| |++..+ .+.+. .......++
T Consensus 199 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 276 (412)
T 2x5d_A 199 ALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIA--VEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDY 276 (412)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTE--EEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcE--EEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhhcc
Confidence 4799999999999999987655531 111111 222 44559999996 33 444432 23221 122234467
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.|+++++++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 277 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 277 GTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp CCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8899999999888875432 346667788888888888875
No 58
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.98 E-value=5e-10 Score=83.61 Aligned_cols=107 Identities=17% Similarity=0.090 Sum_probs=63.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||+++|+||+++++...|.. ...+..+.. ..+.+++|.+| .| |++.. +.+.+. .......+++.|+
T Consensus 188 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (391)
T 3h14_A 188 EAAQAQGASFISDEIYHGIEYEAKAVTALELTDEC--YVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPH 265 (391)
T ss_dssp HHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSS--EEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCH
T ss_pred HHHHHcCCEEEEECcchhcccCCCCcChhhcCCCE--EEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccCCCH
Confidence 4799999999999999988766643 222221111 33338999996 33 44433 233321 1222345667899
Q ss_pred HHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
++.+++.++++..+. ++..++++++-+++.+.|+++
T Consensus 266 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 302 (391)
T 3h14_A 266 ASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA 302 (391)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999988888871111 234445566666666666654
No 59
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.97 E-value=6.5e-11 Score=88.53 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=63.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhhhcC-CC--CCCCEEEEchhhc-cC---cccccc-ccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHEHFD-LE--ESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~~~g-~~--~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+|+++++.|... .....+ .. ..+++.+|+|++| .| |++..+ .+.+. .......+++
T Consensus 206 ~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 285 (407)
T 3nra_A 206 ALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLR 285 (407)
T ss_dssp HHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSS
T ss_pred HHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccC
Confidence 47999999999999999876666532 222222 11 0144558999996 34 554432 23221 1222334566
Q ss_pred CCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
.++++++++.++|+..++ ++..++++++.+++++.|+++
T Consensus 286 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (407)
T 3nra_A 286 AAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGC 326 (407)
T ss_dssp SCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 788888777766652111 233445566666666666553
No 60
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.97 E-value=6.1e-10 Score=85.17 Aligned_cols=107 Identities=13% Similarity=0.011 Sum_probs=71.5
Q ss_pred ChhhhhCCEEEEccccccccCCCc---chhh--hhcCCCCCCCEEEEchhhc-cC---ccccc-c-ccccc-cccceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK---FWCH--EHFDLEESPDIVTFSKKMQ-LG---GYFLK-P-EFVPQ-QAYRVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~---~~~~--~~~g~~~~pDi~t~gK~lg-~g---G~~~~-~-~~~~~-~~~~~~~T 68 (119)
++|++||+++|+||+++++...|. .... ...+.. +++.+++|.++ .| |++.. + .+.+. .......+
T Consensus 228 ~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~ 305 (447)
T 3b46_A 228 NICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLT--LTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRIC 305 (447)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTE--EEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcE--EEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhcc
Confidence 479999999999999998766553 1111 124544 67779999996 34 55544 2 23322 12223457
Q ss_pred cCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
++.+++..+++.++|+....+ +..++++++.+++.+.|+++
T Consensus 306 ~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 306 FASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 788999999999999876333 35556777778888888765
No 61
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.96 E-value=1.4e-09 Score=80.45 Aligned_cols=105 Identities=11% Similarity=-0.004 Sum_probs=65.5
Q ss_pred Chhhhh--CCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhccC----cccccc-ccccccccceeeccCCCH
Q psy4800 1 MYEKYH--GSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLG----GYFLKP-EFVPQQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~--~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~g----G~~~~~-~~~~~~~~~~~~T~~~~p 73 (119)
++|++| |+++|+||++++|+..+........+.. +++.+++|. +.. |++..+ .+..... ....+++.|+
T Consensus 184 ~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~~ 259 (367)
T 3euc_A 184 RAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNL--LVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD-KVRPPYNVNV 259 (367)
T ss_dssp HHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTE--EEEEECCCT-TSCSCCEEEEEECHHHHHHHG-GGCCSSCCCH
T ss_pred HhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCE--EEEecchhh-cccccCceeeeeCHHHHHHHH-HhCCCCCCCH
Confidence 369999 9999999999987654443333334433 667799999 533 444332 2222111 1123567899
Q ss_pred HHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+..+. ++..++++++.+++.+.|+++
T Consensus 260 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 296 (367)
T 3euc_A 260 LTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH 296 (367)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998876221 244555666666666666653
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.95 E-value=7e-10 Score=81.66 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=60.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE---EEchhhc-cC---cccc-c-cccccccccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV---TFSKKMQ-LG---GYFL-K-PEFVPQQAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~---t~gK~lg-~g---G~~~-~-~~~~~~~~~~~~~T~~~ 71 (119)
++|++||+++|+||+++++.+.+........+.. ++++ +++|.+| .| |++. . +.+.+... ....+++.
T Consensus 171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~-~~~~~~~~ 247 (361)
T 3ftb_A 171 KLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNY--SCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIK-AKQNPWNI 247 (361)
T ss_dssp HHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTC--SSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHH-TTSCTTCS
T ss_pred HHhhhcCCEEEEECcchhhcCCcccchhHhcccC--CCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHH-hhCCCCCC
Confidence 3688999999999999887654222222222322 3433 8999986 33 4433 2 22322111 11235688
Q ss_pred CHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHh
Q psy4800 72 DPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~ 108 (119)
|+++++++.++|+.-+. ++..++++++.+++++.|++
T Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 285 (361)
T 3ftb_A 248 NCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK 285 (361)
T ss_dssp CHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888873111 23344455555666666654
No 63
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.95 E-value=6.6e-10 Score=82.32 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=62.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhh-h--------hcCCCCCCCEEEEchhhc-cC---cccccc-ccccc-cccce
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCH-E--------HFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRV 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~-~--------~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~ 65 (119)
++|++||+++|+||+++++.+.|..... + ..+.. +++.+++|.+| .| |++..+ .+.+. .....
T Consensus 181 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 258 (376)
T 3ezs_A 181 KLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNV--LVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA 258 (376)
T ss_dssp HHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTE--EEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcE--EEEecchhccCCccceeEEEeeCHHHHHHHHHHHh
Confidence 3699999999999999988776643222 1 23333 55669999996 33 444332 23221 12223
Q ss_pred eeccCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHH
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRL 107 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~ 107 (119)
..+++.|+++++++.++|+..+. ++..++++++-+++.+.|+
T Consensus 259 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 259 YLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp TTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST
T ss_pred hhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678899999999888874211 1233344444444444443
No 64
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.95 E-value=3.9e-10 Score=84.01 Aligned_cols=107 Identities=11% Similarity=0.012 Sum_probs=69.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcc----hhhh--hcCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeec
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF----WCHE--HFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNT 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~----~~~~--~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T 68 (119)
++|++||+++|+||+++++...|.. .... .++.. +++.+++|.+| .| |++.. +.+.+. ......+|
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 267 (388)
T 1j32_A 190 QVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERS--VVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHST 267 (388)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTE--EEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTT
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCE--EEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcc
Confidence 4799999999999999887655531 2111 13333 66779999996 33 44443 223221 11223456
Q ss_pred cCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++.+++++.++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 268 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 268 SNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp CSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 77889999888888874322 245667778888888888764
No 65
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.95 E-value=3.5e-10 Score=84.32 Aligned_cols=107 Identities=18% Similarity=0.167 Sum_probs=67.8
Q ss_pred ChhhhhCCEEEEccccccccCCCc----chhhh-hcCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK----FWCHE-HFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~----~~~~~-~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~ 69 (119)
++|++||+++|+||+++++...|. ..... ..+.. +.+.+++|.++ .| |++.. +.+.+. .......++
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 267 (386)
T 1u08_A 190 QAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA--VAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTF 267 (386)
T ss_dssp HHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTE--EEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTS
T ss_pred HHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcE--EEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhcc
Confidence 479999999999999998765553 22221 23443 56679999996 33 44443 223221 122233567
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.++++++++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 268 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 268 SVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp SCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred CCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7889988888888876422 245566667777777776653
No 66
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.94 E-value=1e-09 Score=81.20 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=67.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCCHHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGDPGK 75 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~p~~ 75 (119)
++|++||+++|+||+|++|+..+.....+..+.. +.+.+++|.+| .| |++..+ .+.+... ....+++.|+++
T Consensus 173 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (360)
T 3hdo_A 173 ELARRCAGMLVLDETYAEFAESNALELVRRHENV--VVTRTLSKSYSLAGMRIGLAIARPEVIAALD-KIRDHYNLDRLA 249 (360)
T ss_dssp HHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSE--EEEEESTTTTSCTTSCCEEEECCHHHHHHHH-HHSCSCCSCHHH
T ss_pred HHHHHCCCEEEEECChHhhCCcchhHHhccCCCE--EEEecchHhhcCCccceeeEeeCHHHHHHHH-HhCCCCCCCHHH
Confidence 4799999999999999887433333233333333 55668999986 33 454432 2322111 112346789999
Q ss_pred HHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 76 VLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 76 ~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++.++|+..+. ++..++++++.+++.+.|+++
T Consensus 250 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 250 QAACVAALRDQAYLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999885221 345566777777788777765
No 67
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.94 E-value=2.7e-10 Score=84.66 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=65.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC-CCCCEEEEchhhc-cC---cccccc-ccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE-ESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~-~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||+|+++.+.|.. ......+.. ..+++.+++|++| .| |++..+ .+.+. .......+++.|
T Consensus 185 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~ 264 (376)
T 2dou_A 185 GLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQY 264 (376)
T ss_dssp HHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSC
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCC
Confidence 4799999999999999987665532 112221211 0145569999996 33 454432 23221 112233456778
Q ss_pred HHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 265 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 265 AGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888888865321 234455666777777777653
No 68
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.94 E-value=4e-10 Score=85.56 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=63.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchh-hhhcCCCCC-------CC----EEEEchhhc-cC---ccccc-c-ccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWC-HEHFDLEES-------PD----IVTFSKKMQ-LG---GYFLK-P-EFVPQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~-~~~~g~~~~-------pD----i~t~gK~lg-~g---G~~~~-~-~~~~~~~ 62 (119)
++|++||+++|+||+|+++++.|..+. ......+.. +| +.+|+|++| .| |++.. + .+....
T Consensus 218 ~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~- 296 (435)
T 3piu_A 218 SFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAA- 296 (435)
T ss_dssp HHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHH-
T ss_pred HHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHH-
Confidence 479999999999999998766665322 111111000 23 558999996 33 45443 2 222211
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHh---h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRVFNTWMGDPGKVLLLKGIIDTIH---N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~~~T~~~~p~~~a~a~a~l~~i~---~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.+++..++++.+++.+.++..+ + ++..++++++.+++++.|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 297 TKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1123344567888887777776332 1 234556677777777777764
No 69
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.94 E-value=3.7e-10 Score=83.78 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=69.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhc-CCCCCCCE--EEEchhhc-cC---cccccc-ccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHF-DLEESPDI--VTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~-g~~~~pDi--~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++|+||+|+++...|.......+ +.. ..|+ .+++|.+| .| |++..+ .+.+. .......+++.
T Consensus 177 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 255 (370)
T 2z61_A 177 EFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENL-EKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISA 255 (370)
T ss_dssp HHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTC-SSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCC-CcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCC
Confidence 4799999999999999877555543222222 111 1344 48999996 33 454432 33221 12223346678
Q ss_pred CHHHHHHHHHHHHH-Hhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDT-IHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~-i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
|+++++++.++|+. .++ ++..++++++.+++.+.|+++
T Consensus 256 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 256 PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999998888875 222 345677888888888888875
No 70
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.94 E-value=6.1e-10 Score=83.16 Aligned_cols=105 Identities=14% Similarity=0.047 Sum_probs=68.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc-ccccc-cccceeeccC-CCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP-EFVPQ-QAYRVFNTWM-GDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~-~~~~~-~~~~~~~T~~-~~p 73 (119)
++|++||+++|+||+|+ +|+++... ...++ ..+|++ +++|+++ .||++..+ .+.+. .+.....+++ .++
T Consensus 185 ~l~~~~~~~li~Dea~~-~g~~~~~~--~~~~~-~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~l~~~~~~~~~~~~~~ 260 (405)
T 2vi8_A 185 EIADEVGAYLMVDMAHI-AGLVAAGL--HPNPV-PYAHFVTTTTHKTLRGPRGGMILCQEQFAKQIDKAIFPGIQGGPLM 260 (405)
T ss_dssp HHHHHHTCEEEEECTTT-HHHHHTTS--SCCST-TTCSEEEEESSSTTCCCSCEEEEECHHHHHHHHHHHTTTTCSSCCH
T ss_pred HHHHHcCCEEEEEcccc-ccccccCc--CCCcc-ccCCEEEEeccccCCCCCCeEEEEcHHHHHHHHhhhcccccCCCCH
Confidence 47999999999999987 55443211 11222 138887 8999985 35666543 33221 1111111223 478
Q ss_pred HHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++++.++++.+.+ ++..++++++.+++.+.|+++
T Consensus 261 ~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 299 (405)
T 2vi8_A 261 HVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299 (405)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 888888889988764 467788899999999999875
No 71
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.93 E-value=1.2e-09 Score=81.93 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=68.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhcc--C-ccccc-ccc----cc-ccccce------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQL--G-GYFLK-PEF----VP-QQAYRV------ 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~--g-G~~~~-~~~----~~-~~~~~~------ 65 (119)
++|++||+++|+||+|+ | +..+..+.++++ +.+.++.|++++ | |++.. +.+ .. ..+.++
T Consensus 162 ~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~d--~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (379)
T 3ke3_A 162 EAVHSVGGLLVIDCIAS--G--CVWLDMKELGID--VLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQW 235 (379)
T ss_dssp HHHHHTTCEEEEECTTC--T--TCCCCHHHHTCS--EEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHH
T ss_pred HHHHHcCCEEEEEeccc--C--CccccccccCCC--EEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHH
Confidence 47999999999999986 4 344455566654 444466699852 1 33332 222 11 111111
Q ss_pred ------------eeccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 66 ------------FNTWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 ------------~~T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
..+++.|+..+++..++|+.++++ +..++.+++.+++++.|+++
T Consensus 236 ~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 236 LTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 123367888888899999998764 56778889999999999876
No 72
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.93 E-value=1.2e-09 Score=81.53 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=63.8
Q ss_pred ChhhhhCCEEEEccccccccCCC-cchh-hh-------hcCCCCCCCEEEEchhhccC----cccccc-ccccc-cccce
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG-KFWC-HE-------HFDLEESPDIVTFSKKMQLG----GYFLKP-EFVPQ-QAYRV 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G-~~~~-~~-------~~g~~~~pDi~t~gK~lg~g----G~~~~~-~~~~~-~~~~~ 65 (119)
++|++||+++|+||+++++.+.| .... .+ ..+.. +++.+|+|+++.. |++..+ .+.+. .....
T Consensus 195 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (396)
T 3jtx_A 195 DLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKL--LMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRT 272 (396)
T ss_dssp HHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTE--EEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcE--EEEeccccccCCcccceEEEEeCHHHHHHHHHHHh
Confidence 47999999999999999887766 3222 11 12333 6677999986533 444332 23221 12223
Q ss_pred eeccCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHh
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~ 108 (119)
..+++.|+++.+++.++|+.-+. ++.+++++++-+++.+.|++
T Consensus 273 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 316 (396)
T 3jtx_A 273 YHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ 316 (396)
T ss_dssp HHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678899999999888864111 12334455555555555544
No 73
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.92 E-value=5.1e-10 Score=84.29 Aligned_cols=107 Identities=14% Similarity=0.056 Sum_probs=67.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhh----cCCCCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEH----FDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~----~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~ 69 (119)
++|++||+++|+||+++++...|.. ..... .+.. +.+.+++|.+| .| |++.. +.+.+. .......++
T Consensus 187 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 264 (411)
T 2o0r_A 187 EIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERT--ITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY 264 (411)
T ss_dssp HHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE--EEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCE--EEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence 4799999999999999987666642 11111 2222 44558999996 33 44443 223221 112233466
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.++++.+++.++|+..++ ++..++++++.+++.+.|+++
T Consensus 265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 265 VGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp CCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7788888888888876432 345667778888888888765
No 74
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.92 E-value=9.4e-10 Score=82.36 Aligned_cols=109 Identities=12% Similarity=0.019 Sum_probs=66.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhhhcCCC--CCCCEEEEchhhc-cC---ccccc-cccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHEHFDLE--ESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~~~g~~--~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++|+||+++++.+.|... ....+... ..+++.+++|.+| .| |++.. ..+... ......++++.
T Consensus 194 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 273 (410)
T 3e2y_A 194 DLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTC 273 (410)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCC
Confidence 47999999999999999887777522 22222211 0134458999996 33 44433 223221 12233457788
Q ss_pred CHHHHHHHHHHHHHH-------hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTI-------HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i-------~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++++.++|+.. ++ ++..++++++.+++.+.|+++
T Consensus 274 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 274 ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999988741 11 234455666667777777654
No 75
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.92 E-value=6e-10 Score=84.02 Aligned_cols=107 Identities=13% Similarity=0.033 Sum_probs=67.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcc---hhhh-hcCCCCCCCEEEEchhhc-cC---cccccc-ccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF---WCHE-HFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~---~~~~-~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+++++...|.. .... ..+.. +.+.+++|.+| .| |++..+ .+.+. .......+++
T Consensus 208 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 285 (404)
T 2o1b_A 208 AKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVA--IEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAG 285 (404)
T ss_dssp HHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHE--EEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCE--EEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCC
Confidence 4799999999999999987555531 1111 11222 45569999996 33 444332 23221 1122334567
Q ss_pred CCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
.|+++++++.++|+..++ ++.+++++++.+++.+.|+++
T Consensus 286 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 286 MFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999888876422 244556777777888888765
No 76
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.92 E-value=8.1e-10 Score=81.84 Aligned_cols=107 Identities=12% Similarity=0.044 Sum_probs=61.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCC-CCCCEEEEchhhc-cC---cccc-c-cccccccccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLE-ESPDIVTFSKKMQ-LG---GYFL-K-PEFVPQQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~-~~pDi~t~gK~lg-~g---G~~~-~-~~~~~~~~~~~~~T~~~~p 73 (119)
++|++||+++|+||++++++..+... .+..+.. ..+.+.+++|++| .| |++. . +.+.+.... ...+++.|+
T Consensus 173 ~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~-~~~~~~~~~ 250 (364)
T 1lc5_A 173 DRCKSLNINLILDEAFIDFIPHETGF-IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR-QQMPWSVNA 250 (364)
T ss_dssp HHHHHHTCEEEEECTTGGGSTTCCCS-GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHH-HSCTTCSCH
T ss_pred HHhhhcCcEEEEECcChhhccCccch-hhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHH-hCCCCCCCH
Confidence 47999999999999998775444321 2222211 0134459999996 33 5544 3 223221111 123668899
Q ss_pred HHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+.-+. ++..++++++.+++.+.|+++
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (364)
T 1lc5_A 251 LAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL 287 (364)
T ss_dssp HHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999888887764110 233444556666666666543
No 77
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.91 E-value=1.5e-09 Score=82.24 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=68.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC-CCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE-ESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~-~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||+++|+||+++++...|.. .....++.. ....+.+|+|+++.| |++.. +.+.+. .......+++.|+
T Consensus 215 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~ 294 (425)
T 1vp4_A 215 EIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPA 294 (425)
T ss_dssp HHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHhhhhcCCCCH
Confidence 4799999999999999987665642 222222211 003345899999623 44433 233221 1122234567799
Q ss_pred HHHHHHHHHHHHH--hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTI--HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i--~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+.. ++ ++..++++++.+++.+.|++.
T Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 295 ITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEY 334 (425)
T ss_dssp HHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998864 22 245566778888888888775
No 78
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.91 E-value=2e-09 Score=81.69 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=62.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC-CCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE-ESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~-~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||+++|+||+++++...|.. .....++.. ..+.+.+|+|.++.| |++.. +.+.+. .......+++.|+
T Consensus 218 ~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~ 297 (425)
T 2r2n_A 218 ELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPST 297 (425)
T ss_dssp HHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTTTCSSCH
T ss_pred HHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHhcCCCCH
Confidence 4799999999999999876555531 111112211 014455999999633 44443 233321 1122234567899
Q ss_pred HHHHHHHHHHHHHhhhc-------HHHHHHHHHHHHHHHHHh
Q psy4800 74 GKVLLLKGIIDTIHNEN-------LLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~~-------~~~~~~~~g~~l~~~L~~ 108 (119)
++.+++.++|+.+.+++ ..++++++-+++.+.|++
T Consensus 298 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 339 (425)
T 2r2n_A 298 FNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADK 339 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888753322 233444555555555554
No 79
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.91 E-value=1.4e-09 Score=81.22 Aligned_cols=107 Identities=7% Similarity=-0.107 Sum_probs=66.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCC-CCCC-EEEEchhhc-cC---ccccc--ccccccc-ccce-eecc-
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLE-ESPD-IVTFSKKMQ-LG---GYFLK--PEFVPQQ-AYRV-FNTW- 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~-~~pD-i~t~gK~lg-~g---G~~~~--~~~~~~~-~~~~-~~T~- 69 (119)
++|++||+++|+||+|+++.+.|.... ....+. ..+| +.+++|.+| .| |++.. +.+.+.. .... .+++
T Consensus 189 ~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 267 (390)
T 1d2f_A 189 DLCERHGVRVISDEIHMDMVWGEQPHI-PWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLS 267 (390)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSSCCC-CGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHcCCEEEEEccccccccCCCCCc-CHHHcchhhHhhccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccC
Confidence 479999999999999998876665321 112222 0013 789999996 33 44442 2333211 1122 3454
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
+.|+++++++.++++..++ ++..++++++.+++.+.|++
T Consensus 268 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (390)
T 1d2f_A 268 SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNA 308 (390)
T ss_dssp SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6799999999888875322 23445566677777777765
No 80
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.89 E-value=1.1e-09 Score=81.11 Aligned_cols=107 Identities=5% Similarity=-0.104 Sum_probs=68.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhhh-----cCCCCCCCEEEEchhhc-cC---ccccc--ccccccc-cc-cee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHEH-----FDLEESPDIVTFSKKMQ-LG---GYFLK--PEFVPQQ-AY-RVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~~-----~g~~~~pDi~t~gK~lg-~g---G~~~~--~~~~~~~-~~-~~~ 66 (119)
++|++||+++|+||+|+++++.|... .... .+.. +++.+++|.++ .| |++.. ..+.+.. .. ..+
T Consensus 183 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 260 (383)
T 3kax_A 183 SLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAART--ITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQ 260 (383)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTE--EEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcE--EEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhc
Confidence 36999999999999999887777421 1111 2332 55668999996 33 45432 2333211 11 122
Q ss_pred eccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++.|+++++++.++++..++ ++..++++++.+++.+.|++.
T Consensus 261 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 305 (383)
T 3kax_A 261 GFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDH 305 (383)
T ss_dssp TCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3457899999999888876332 345566777777888877763
No 81
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.89 E-value=2.9e-09 Score=79.71 Aligned_cols=109 Identities=13% Similarity=-0.025 Sum_probs=68.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC-CCCCEEEEchhhcc---Cccccc-cccccc-cccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE-ESPDIVTFSKKMQL---GGYFLK-PEFVPQ-QAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~-~~pDi~t~gK~lg~---gG~~~~-~~~~~~-~~~~~~~T~~~~p 73 (119)
++|++||+++|+||+++++...|.. .....++.. ..+++.+|+|.++. .|++.. +.+.+. .......+++.++
T Consensus 202 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
T 2zc0_A 202 EIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPA 281 (407)
T ss_dssp HHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSSSCH
T ss_pred HHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCCCCH
Confidence 4799999999999999887665542 222223221 11456689999962 233332 223221 1112234566789
Q ss_pred HHHHHHHHHHHHH--h-h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTI--H-N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i--~-~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.+.|+.. + + ++..++++++.+++.+.|++.
T Consensus 282 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (407)
T 2zc0_A 282 ISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH 322 (407)
T ss_dssp HHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988888764 2 1 346667778888888888764
No 82
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.88 E-value=1.6e-09 Score=80.34 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=66.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcch-hhhhc-----CCCCCCCEEEEchhhc-cC---ccccc-c-cccccc-cc-cee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW-CHEHF-----DLEESPDIVTFSKKMQ-LG---GYFLK-P-EFVPQQ-AY-RVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~-~~~~~-----g~~~~pDi~t~gK~lg-~g---G~~~~-~-~~~~~~-~~-~~~ 66 (119)
++|++||+++|+||+|+++.+.|... ....+ +.. +.+.+++|++| .| |++.. + .+.+.. .. ..+
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~ 268 (391)
T 4dq6_A 191 DICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNT--ITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRI 268 (391)
T ss_dssp HHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTE--EEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcE--EEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhh
Confidence 47999999999999999887776421 11111 111 34558999996 33 44432 2 333211 11 223
Q ss_pred eccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
++++.|+++++++.++++..++ ++..++++++.+++++.|++
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 312 (391)
T 4dq6_A 269 DIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINE 312 (391)
T ss_dssp TCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4557899999999999886432 24455666777777777765
No 83
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.88 E-value=3.7e-09 Score=78.06 Aligned_cols=101 Identities=15% Similarity=-0.040 Sum_probs=60.4
Q ss_pred hhhhCCEEEEccccccccCCCcchhhhhcCCCCCCC----EEEEchhhc-cC---ccccc-cccccccccceeeccCCCH
Q psy4800 3 EKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPD----IVTFSKKMQ-LG---GYFLK-PEFVPQQAYRVFNTWMGDP 73 (119)
Q Consensus 3 ~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pD----i~t~gK~lg-~g---G~~~~-~~~~~~~~~~~~~T~~~~p 73 (119)
|++ |+++|+||+|++|++ |........... +| +.+++|.+| .| |++.. +.+.+.... ...+++.|+
T Consensus 184 ~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-~~~~~~~~~ 258 (363)
T 3ffh_A 184 VPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRT--YKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNI-VRPPFNTTS 258 (363)
T ss_dssp SCT-TSEEEEECTTGGGCS-SCCCCCGGGGGT--CTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHH-TCCSCCCBH
T ss_pred CCC-CcEEEEeCchHhhcC-ccccCHHHHhhc--CCCEEEEeechhhhcCchhceeeeecCHHHHHHHHH-hCCCCCCCH
Confidence 444 999999999998866 653322222212 33 458999996 33 44433 223221111 123678999
Q ss_pred HHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHh
Q psy4800 74 GKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~ 108 (119)
++++++.++|+..+. ++..++++++.+++.+.|++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (363)
T 3ffh_A 259 IGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR 294 (363)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999873321 23445566666666666665
No 84
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.88 E-value=3.3e-09 Score=79.67 Aligned_cols=109 Identities=16% Similarity=0.064 Sum_probs=68.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCCC--CCCCEEEEchhhc-cC---ccccc-ccc-------ccc-cccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDLE--ESPDIVTFSKKMQ-LG---GYFLK-PEF-------VPQ-QAYR 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~~--~~pDi~t~gK~lg-~g---G~~~~-~~~-------~~~-~~~~ 64 (119)
++|++||+++|+||++++++..|.. .....++-. ..+.+.+|+|.+| .| |++.. +.+ ... ....
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T 3asa_A 190 HYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERF 269 (400)
T ss_dssp HHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHH
Confidence 3799999999999999988665531 122222211 0023559999996 34 45433 233 111 1111
Q ss_pred eeecc-CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNTW-MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T~-~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+++ +.|+++.+++.++|+...-++..++++++.+++++.|+++
T Consensus 270 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 270 LSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 22344 5788988888888876533467788889999999999875
No 85
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.88 E-value=1.1e-09 Score=81.98 Aligned_cols=108 Identities=12% Similarity=0.073 Sum_probs=68.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCE--EEEchhhc-cC---ccccc-cccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDI--VTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi--~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||+++++...|.......+.-....|+ .+++|.+| .| |++.. +.+.+. .......+++.+
T Consensus 201 ~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~ 280 (389)
T 1o4s_A 201 RLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCIN 280 (389)
T ss_dssp HHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCC
Confidence 479999999999999987765553222222211111454 48999996 33 55443 233221 122233466788
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++..++.++|+.. -++..++++++.+++.+.|+++
T Consensus 281 ~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 281 TVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp HHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 98888877776532 3456778888999999999876
No 86
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.88 E-value=1.8e-09 Score=80.64 Aligned_cols=106 Identities=10% Similarity=-0.079 Sum_probs=63.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhc-----CCCCCCCEEEEchhhc-cC---cccccc--ccccc-cccceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHF-----DLEESPDIVTFSKKMQ-LG---GYFLKP--EFVPQ-QAYRVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~-----g~~~~pDi~t~gK~lg-~g---G~~~~~--~~~~~-~~~~~~~ 67 (119)
++|++||+++|+||+|+++++.|.. .....+ +.. +++.+++|.+| .| |++... .+.+. .......
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~ 268 (399)
T 1c7n_A 191 DIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKT--ITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDAT 268 (399)
T ss_dssp HHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTE--EEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcE--EEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhc
Confidence 4799999999999999988766642 112111 222 44558999996 33 444432 24332 1111222
Q ss_pred cc-CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 68 TW-MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 68 T~-~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
++ +.|+++++++.++|+..++ ++..++++++.+++.+.|++
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 312 (399)
T 1c7n_A 269 SGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEV 312 (399)
T ss_dssp TCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 5789999999888875321 23445566666777777665
No 87
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.88 E-value=3e-09 Score=80.31 Aligned_cols=107 Identities=9% Similarity=-0.006 Sum_probs=69.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcc---------hhhhh-cCCCCCCCEEEEchhhc-cC---ccccc-ccccc-c----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF---------WCHEH-FDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVP-Q---- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~---------~~~~~-~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~-~---- 60 (119)
++|++||+++|+||+|+++...+.. ..... .+.. ..+.+++|.++ .| |++.. ..+.. .
T Consensus 209 ~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 286 (437)
T 3g0t_A 209 ELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNY--ILALSSSKAFSYAGQRIGVLMISGKLYEREYPDL 286 (437)
T ss_dssp HHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCE--EEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGG
T ss_pred HHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcE--EEEEcCccCCCCccceeEEEEECHHHhhhhhhcc
Confidence 4799999999999999865333321 11111 2211 33448999986 33 55443 23332 2
Q ss_pred --------------cccceeeccCCCHHHHHHHHHHHHHHh-----hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 61 --------------QAYRVFNTWMGDPGKVLLLKGIIDTIH-----NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 --------------~~~~~~~T~~~~p~~~a~a~a~l~~i~-----~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.......++..++++.+++.++|+..+ -++..++++++.+++++.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 287 EESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp HHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 122234577889999999999998875 2456777888888899888875
No 88
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.39 E-value=2e-10 Score=85.98 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=62.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcc----hhhhh--cCCCCCCCEEEEchhhc-cC---ccccc-cc-ccccc-ccceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF----WCHEH--FDLEESPDIVTFSKKMQ-LG---GYFLK-PE-FVPQQ-AYRVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~----~~~~~--~g~~~~pDi~t~gK~lg-~g---G~~~~-~~-~~~~~-~~~~~~ 67 (119)
++|++||+++|+||+++++.+.|.. ..... .+.. +++.+|+|+++ .| |+++. +. +.+.. ......
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 268 (392)
T 3b1d_A 191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFA--LVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN 268 (392)
Confidence 5799999999999999988766632 22211 2333 67779999996 33 55543 22 44322 122222
Q ss_pred cc-CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 68 TW-MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 68 T~-~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
++ +.|+++++++.++|+..++ ++..++++++.+++.+.|++
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 312 (392)
T 3b1d_A 269 NHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQ 312 (392)
Confidence 22 4688899988888874221 12333344444455554443
No 89
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.87 E-value=2.1e-09 Score=80.90 Aligned_cols=109 Identities=12% Similarity=0.080 Sum_probs=67.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCC--CCCCCEEEEchhhc-cC---ccccc-cccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDL--EESPDIVTFSKKMQ-LG---GYFLK-PEFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~--~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++|+||+|+++.+.|.. .....+.. ...+++.+++|.+| .| |++.. ..+... ......++++.
T Consensus 201 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 280 (422)
T 3fvs_A 201 SLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHC 280 (422)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCC
Confidence 4799999999999999988777642 11222211 10144558999996 33 44433 223221 12233457788
Q ss_pred CHHHHHHHHHHHHH-------Hhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDT-------IHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~-------i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++++.++|+. .++ ++..++++++.+++.+.|+++
T Consensus 281 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (422)
T 3fvs_A 281 PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327 (422)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999875 111 234556667777777777664
No 90
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.86 E-value=2e-09 Score=81.02 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=67.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC---ccccc-c-cccccc-ccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG---GYFLK-P-EFVPQQ-AYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g---G~~~~-~-~~~~~~-~~~~~~T~~~ 71 (119)
++|++||+++|+||+++++.+.|..... ..++. ..|++ +++|.+| .| |++.. + .+.+.. ......+ +.
T Consensus 201 ~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~-~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~ 277 (409)
T 2gb3_A 201 EIAERHGLFLIVDEVYSEIVFRGEFASA-LSIES-DKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-AP 277 (409)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCC-TTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CC
T ss_pred HHHHHcCCEEEEECcccccccCCCCCCc-cccCC-CCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CC
Confidence 4799999999999999987666543222 12221 25766 7899996 33 44433 3 333221 1122234 77
Q ss_pred CHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
|+++++++.++|+...+ +++.++++++.+++.+.|+++
T Consensus 278 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 278 PLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 89999888888854221 345666788888888888775
No 91
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.85 E-value=8.3e-10 Score=82.39 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=65.0
Q ss_pred ChhhhhCCEEEEccccccccCCC--cchhhhhc-CCCCCCCE---EEEchhhc-cC---ccccc----ccc----ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG--KFWCHEHF-DLEESPDI---VTFSKKMQ-LG---GYFLK----PEF----VPQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G--~~~~~~~~-g~~~~pDi---~t~gK~lg-~g---G~~~~----~~~----~~~~~ 62 (119)
++|++||+++|+||+++++++.| .......+ ... +|+ .+++|++| .| |++.. +.+ .....
T Consensus 196 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~ 273 (394)
T 2ay1_A 196 SILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI--PEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMA 273 (394)
T ss_dssp HHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC--SSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC--CCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHH
Confidence 47999999999999999886654 22222222 112 443 38899996 34 55432 211 11111
Q ss_pred cceeeccC-CCHHHHHHHHHHHHHH------h--hhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 63 YRVFNTWM-GDPGKVLLLKGIIDTI------H--NENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 63 ~~~~~T~~-~~p~~~a~a~a~l~~i------~--~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
.....++. .|+++++++.++|+.. + -++..++++++.+++.+.|+++.
T Consensus 274 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 330 (394)
T 2ay1_A 274 FLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLS 330 (394)
T ss_dssp HHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11223333 4888888888888754 1 13456667777888888887653
No 92
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.84 E-value=1.8e-09 Score=80.89 Aligned_cols=109 Identities=10% Similarity=-0.012 Sum_probs=63.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc-hhhhhcCC----CCCCCEEEEchhhccC---ccccc-cccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF-WCHEHFDL----EESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~-~~~~~~g~----~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+++++.+.|.. .....++. ...+.+.+++|+++.| |++.. +.+.+. .......+++
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 269 (397)
T 2zyj_A 190 QMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLH 269 (397)
T ss_dssp HHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence 4799999999999999988666642 11222211 1013455899999622 34332 223221 1122334566
Q ss_pred CCHHHHHHHHHHHHHHh-h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIH-N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~-~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
.|+++++++.++|+... + ++..++++++.+++.+.|++.
T Consensus 270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE 311 (397)
T ss_dssp CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999988888776431 1 234445566666777777653
No 93
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.84 E-value=1.5e-09 Score=81.64 Aligned_cols=108 Identities=12% Similarity=0.070 Sum_probs=66.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC---cccc--c-c----ccccccccceee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG---GYFL--K-P----EFVPQQAYRVFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g---G~~~--~-~----~~~~~~~~~~~~ 67 (119)
++|++||+++|+||+++++...+.......++ .+.+|++ +++|.++ .| |++. . + .+.+........
T Consensus 201 ~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~ 279 (406)
T 1xi9_A 201 NIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARI 279 (406)
T ss_dssp HHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHh
Confidence 47999999999999998875533333333333 2112555 7899996 33 4544 2 3 333211111111
Q ss_pred ccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++.|+++++++.++|+...+ ++..++++++.+++.+.|+++
T Consensus 280 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 280 RLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp TCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 156788888888888864322 345667778888888888764
No 94
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.83 E-value=6.3e-10 Score=82.97 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=63.4
Q ss_pred ChhhhhCCEEEEccccccccCCC--cchhhhhcCCCCCCC----EEEEchhhc-cC---ccccc----c----ccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG--KFWCHEHFDLEESPD----IVTFSKKMQ-LG---GYFLK----P----EFVPQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G--~~~~~~~~g~~~~pD----i~t~gK~lg-~g---G~~~~----~----~~~~~~~ 62 (119)
++|++||+++|+||+++++++.| .......+... +| +.+++|++| .| |++.. + .+.....
T Consensus 199 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~ 276 (396)
T 2q7w_A 199 QLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM--HKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMK 276 (396)
T ss_dssp HHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH--CSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEecccccccCCccchhHHHHHHHhc--CCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHH
Confidence 47999999999999999886654 22233323211 23 348999996 34 55542 2 2322111
Q ss_pred cceeeccC-CCHHHHHHHHHHHHHH------hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRVFNTWM-GDPGKVLLLKGIIDTI------HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~~~T~~-~~p~~~a~a~a~l~~i------~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
.....++. .|+++++++.++|+.. .+ ++..++++++.+++.+.|+++
T Consensus 277 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11223333 4899988888887643 11 234455677777788877765
No 95
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.83 E-value=1e-08 Score=75.74 Aligned_cols=106 Identities=8% Similarity=-0.040 Sum_probs=60.5
Q ss_pred ChhhhhCCEEEEccccccc--cCCCc---------chhhhhcCCCCCCCEEEEchhhc----cCccccccc-cccc----
Q psy4800 1 MYEKYHGSALLIDEVQTGG--GPCGK---------FWCHEHFDLEESPDIVTFSKKMQ----LGGYFLKPE-FVPQ---- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~--Gr~G~---------~~~~~~~g~~~~pDi~t~gK~lg----~gG~~~~~~-~~~~---- 60 (119)
++|++||+++|+||+++++ +.++. .+..+. +++ +.+.+++|.++ .|+++..+. +...
T Consensus 195 ~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~ 271 (397)
T 3f9t_A 195 KIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVD--SITIDPHKMGHCPIPSGGILFKDIGYKRYLDVD 271 (397)
T ss_dssp HHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCS--EEECCTTTTTCCCSSCEEEEESSGGGGGGTCEE
T ss_pred HHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCC--eEEEccccccCCCCCceEEEEeCHHHHHhhccC
Confidence 4799999999999999863 33443 222233 433 44457889883 122233222 2111
Q ss_pred cccce--------eeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 61 QAYRV--------FNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 ~~~~~--------~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+... +++.+.+++++.++++.+....-++..++++++.+++.+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 272 APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN 328 (397)
T ss_dssp CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 11111 22223355566666555543333456778889999999999886
No 96
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.83 E-value=2.6e-09 Score=80.92 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=66.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhc-CCC-CCCCEEEEchhhc-cC---ccccc-ccc--------ccc-cccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHF-DLE-ESPDIVTFSKKMQ-LG---GYFLK-PEF--------VPQ-QAYR 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~-g~~-~~pDi~t~gK~lg-~g---G~~~~-~~~--------~~~-~~~~ 64 (119)
++|++||+++|+||+|+++...+.......+ +.. ..+.+.+|+|++| .| |++.. +.+ ... ....
T Consensus 225 ~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 304 (432)
T 3ei9_A 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRII 304 (432)
T ss_dssp HHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHH
T ss_pred HHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHh
Confidence 3699999999999999876443332222212 211 0033558999997 45 55543 233 111 1111
Q ss_pred eeeccCCCHHHHHHHHHHHHH--Hh-hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDT--IH-NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~--i~-~~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+++.++++.+++.++++. .+ -++..++++++.+++++.|+++
T Consensus 305 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 305 CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 223446789998888888752 11 1356677888888888888775
No 97
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.83 E-value=4.3e-09 Score=78.58 Aligned_cols=104 Identities=13% Similarity=-0.063 Sum_probs=69.2
Q ss_pred ChhhhhCCEEEEcccccc-ccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc--cccccc-c-cceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTG-GGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP--EFVPQQ-A-YRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG-~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~--~~~~~~-~-~~~~~T~~~ 71 (119)
++|++||+++|+||+|+. +...|.... ... .+|++ +++|+|+ -+|++..+ .+.+.. + ...+.+.+.
T Consensus 185 ~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~---~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~ 259 (407)
T 2dkj_A 185 EIADEVGAYLVVDMAHFAGLVAAGLHPN--PLP---YAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPGIQGGP 259 (407)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTCSCC--CTT---TCSEEEEESSGGGCCCSCEEEEESCHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHcCCEEEEEccccccccccCccCC--ccc---cccEEEEeccccCCCCCceEEEECCHHHHHHHHhhhcccccCCC
Confidence 479999999999999974 433343211 011 27888 8999994 24565543 333211 1 123344457
Q ss_pred CHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
++..++++.++++.+.+ ++..++++++.+++++.|+++
T Consensus 260 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 300 (407)
T 2dkj_A 260 LEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR 300 (407)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888888988754 467788899999999999875
No 98
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.81 E-value=3.6e-09 Score=78.54 Aligned_cols=104 Identities=12% Similarity=0.111 Sum_probs=61.3
Q ss_pred hhhhhCCEEEEccccccccCCCcchhh-hhcCCCCCCCEEEEchhhc-cC---ccccc-cccccccccceeeccCCCHHH
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWCH-EHFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQQAYRVFNTWMGDPGK 75 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~~-~~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~~~~~~~~T~~~~p~~ 75 (119)
+|+ ||+++|+||+++++++....... +.++.. +.+.+|+|.+| .| |++.. +.+.+... ....+|+.|+++
T Consensus 174 ~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~-~~~~~~~~~~~~ 249 (356)
T 1fg7_A 174 LTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHL--AILRTLSKAFALAGLRCGFTLANEEVINLLM-KVIAPYPLSTPV 249 (356)
T ss_dssp HHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTE--EEEEESSSTTCCGGGCCEEEEECHHHHHHHH-HHSCSSCSCHHH
T ss_pred hCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCE--EEEecchHhhcCchhhhEEEEeCHHHHHHHH-HhcCCCCCCHHH
Confidence 466 99999999999987632222221 222222 44559999996 33 55443 22322111 112345788999
Q ss_pred HHHHHHHHHHHh---hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 76 VLLLKGIIDTIH---NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 76 ~a~a~a~l~~i~---~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+++.++|+... -++..++++++.+++.+.|+++
T Consensus 250 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 286 (356)
T 1fg7_A 250 ADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI 286 (356)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 988888886532 1234455667777777777664
No 99
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.81 E-value=1.6e-08 Score=75.88 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=64.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhcc--Cccccc-cccccc-cccc-------eee
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQL--GGYFLK-PEFVPQ-QAYR-------VFN 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg~--gG~~~~-~~~~~~-~~~~-------~~~ 67 (119)
++|++||+++|+||+++ +|... ....... +|+++++ |.+|. .|++.. +.+... .+.. ...
T Consensus 187 ~l~~~~~~~li~Dea~~-~~~~~----~~~~~~~--~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
T 3lvm_A 187 EMCRARGIIYHVDATQS-VGKLP----IDLSQLK--VDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR 259 (423)
T ss_dssp HHHHHHTCEEEEECTTT-TTTSC----CCTTTSC--CSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTC
T ss_pred HHHHHcCCEEEEEhhhh-cCCCC----cChhhcC--CCEEEechHHhcCCCCeEEEEEeccccCCCCccccCCccccccc
Confidence 47999999999999975 33221 1112223 8998766 97752 244332 222221 1111 123
Q ss_pred ccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+...++..+++..++++.+++ ++..++++++.+++++.|+++
T Consensus 260 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (423)
T 3lvm_A 260 SGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDI 303 (423)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445688888888899998866 467777888888888888665
No 100
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.80 E-value=8.2e-09 Score=76.63 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=67.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhh-hhcC-CCCCCCEEEEchhhc-cC---ccccc-cccccccccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCH-EHFD-LEESPDIVTFSKKMQ-LG---GYFLK-PEFVPQQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~-~~~g-~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~~~~~~~~~T~~~~p 73 (119)
++|+.+++++|+||+|+++++....... +.++ .. +++.+++|++| .| |++.. +.+.+... ....+|+.|+
T Consensus 188 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~-~~~~~~~~~~ 264 (369)
T 3cq5_A 188 RIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKL--VVSRTMSKAFDFAGGRLGYFVANPAFIDAVM-LVRLPYHLSA 264 (369)
T ss_dssp HHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTE--EEEEESSSTTSCGGGCCEEEEECTHHHHHHH-TTSCTTCSCH
T ss_pred HHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCE--EEEEechHhcCCcccceEEEEeCHHHHHHHH-HcCCCCCCCH
Confidence 3688889999999999877543222221 2233 22 56679999996 33 44443 22322111 1123567899
Q ss_pred HHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 74 GKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
++++++.++|+..+. ++..++++++.+++.+.|++.
T Consensus 265 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (369)
T 3cq5_A 265 LSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL 301 (369)
T ss_dssp HHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998875321 356677788888888888763
No 101
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.80 E-value=2.8e-08 Score=73.48 Aligned_cols=102 Identities=16% Similarity=0.025 Sum_probs=64.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc---cCccccc-ccccc----cc-c-------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ---LGGYFLK-PEFVP----QQ-A------- 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg---~gG~~~~-~~~~~----~~-~------- 62 (119)
++|++||+++|+||+|+ +| +..+..+.++ +|+++++ |+++ +.|++.. +.+.+ .. .
T Consensus 172 ~l~~~~~~~li~De~~~-~g--~~~~~~~~~~----~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
T 3kgw_A 172 ELCHRYQCLLLVDSVAS-LG--GVPIYMDQQG----IDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTD 244 (393)
T ss_dssp HHHHHTTCEEEEECTTT-TT--TSCCCTTTTT----CCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTC
T ss_pred HHHHHcCCEEEEECCcc-cc--CcccchhhcC----CCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeec
Confidence 48999999999999976 32 1122222222 6887666 9883 1233332 22211 00 0
Q ss_pred ------------cceeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 ------------YRVFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ------------~~~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+.++..++.++++..++++.+.+ ++..++++++.+++.+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 245 ITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 00122345688888888899998866 456778899999999999886
No 102
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.79 E-value=4.6e-09 Score=78.62 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=59.7
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEE--Echhhc--cCcccccc----cccccccc-ceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ--LGGYFLKP----EFVPQQAY-RVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg--~gG~~~~~----~~~~~~~~-~~~~T~~ 70 (119)
++|++||+++|+||+|. |+.+.|... .....+|+++ ++|+++ .||++..+ .+...... .+.++++
T Consensus 191 ~l~~~~~~~li~De~~~~~~~~~~~~~-----~~~~~~di~~~s~sK~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (420)
T 3gbx_A 191 EIADSIGAYLFVDMAHVAGLIAAGVYP-----NPVPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSAQG 265 (420)
T ss_dssp HHHHHTTCEEEEECTTTHHHHHTTSSC-----CSTTTSSEEEEESSGGGCSCSCEEEEESSCCHHHHHHHHHHHC----C
T ss_pred HHHHHcCCEEEEECCcchhceecccCC-----cccccCCEEEeecccCCCCCCceEEEEcCCcHHHHHHhhhhcCCCCCC
Confidence 47999999999999974 554444321 1112389986 669994 36777654 33322111 1222223
Q ss_pred CC-HHHHHHHHHHHHHH-hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GD-PGKVLLLKGIIDTI-HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~-p~~~a~a~a~l~~i-~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++ +...++..+++..+ ++ +++.++++++.+++++.|++.
T Consensus 266 ~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (420)
T 3gbx_A 266 GPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR 308 (420)
T ss_dssp CCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 32 33333333344433 22 356778889999999999864
No 103
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.78 E-value=5.1e-09 Score=80.41 Aligned_cols=107 Identities=11% Similarity=0.034 Sum_probs=64.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcc----hhhhhcCCCCCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF----WCHEHFDLEESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~----~~~~~~g~~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++|+||+++++...|.. ...+..+.. +++.+|+|.++.| |++.. +.+.+. ......++++.
T Consensus 244 ~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~v--i~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~~~ 321 (448)
T 3aow_A 244 ELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRV--IYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCT 321 (448)
T ss_dssp HHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCE--EEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCE--EEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999877555542 222222322 5677999999633 44443 233321 11122346677
Q ss_pred CHHHHHHHHHHHHHH--hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTI--HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i--~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
|+++.+++.++|+.. .+ ++..++++++.+++.+.|++.
T Consensus 322 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 363 (448)
T 3aow_A 322 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF 363 (448)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899998888888642 11 233444556666777777653
No 104
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.78 E-value=6.3e-09 Score=78.68 Aligned_cols=106 Identities=15% Similarity=0.094 Sum_probs=66.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcch----hhhhc----CCCCCCC----EEEEchhhc-cC---ccccc--cccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW----CHEHF----DLEESPD----IVTFSKKMQ-LG---GYFLK--PEFVPQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~----~~~~~----g~~~~pD----i~t~gK~lg-~g---G~~~~--~~~~~~~~ 62 (119)
++|++||+++|+||++++++..|..+ ..... ++. +| +.+++|++| .| |++.. +.+.+...
T Consensus 215 ~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~ 292 (428)
T 1iay_A 215 SFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCN--KDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCAR 292 (428)
T ss_dssp HHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSC--TTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHH
T ss_pred HHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCC--CCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHH
Confidence 37899999999999999865554321 11111 223 67 459999996 33 44433 22322111
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHh---h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRVFNTWMGDPGKVLLLKGIIDTIH---N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~~~T~~~~p~~~a~a~a~l~~i~---~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
....++..|+++.+++.++|+..+ + ++..++++++.+++.+.|+++
T Consensus 293 -~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 293 -KMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp -HHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112345678998888888876432 1 345667788888888888775
No 105
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.77 E-value=5.5e-09 Score=78.51 Aligned_cols=108 Identities=14% Similarity=0.050 Sum_probs=65.1
Q ss_pred ChhhhhCCEEEEccccccccCCCc----chhhhhcCCCCCCC-E--EEEchhhccC----ccccc-c--ccccc----cc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK----FWCHEHFDLEESPD-I--VTFSKKMQLG----GYFLK-P--EFVPQ----QA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~----~~~~~~~g~~~~pD-i--~t~gK~lg~g----G~~~~-~--~~~~~----~~ 62 (119)
++|++||+++|+||+++++...|. .+. ....+...++ + .+++|+++.. |++.. + .+.+. ..
T Consensus 204 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~ 282 (416)
T 1bw0_A 204 RLAEELRLPLFSDEIYAGMVFKGKDPNATFT-SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLK 282 (416)
T ss_dssp HHHHHHTCCEEEECTTTTCBCCSSCTTCCCC-CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHcCCEEEEEccccccccCCCCCCCCcc-CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHH
Confidence 479999999999999998755554 211 1112221122 2 3899997533 44442 2 12211 11
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRVFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
.....+++.|+++++++.++|+.+.+ ++..++++++.+++.+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (416)
T 1bw0_A 283 RVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGEC 332 (416)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11234778899999999999885322 245566777777777777654
No 106
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.77 E-value=3.4e-08 Score=72.23 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=66.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc--cC-ccccc-cccccc----cccce-----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LG-GYFLK-PEFVPQ----QAYRV----- 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~g-G~~~~-~~~~~~----~~~~~----- 65 (119)
++|++||+++|+||+|+ +|..... .+ ... +|++ +++|+++ .| |++.. +.+.+. ...+.
T Consensus 155 ~l~~~~~~~li~Dea~~-~~~~~~~--~~--~~~--~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 1m32_A 155 ALAHRYGKTYIVDAMSS-FGGIPMD--IA--ALH--IDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYA 227 (366)
T ss_dssp HHHHHHTCEEEEECTTT-TTTSCCC--TT--TTT--CSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHH
T ss_pred HHHHHcCCEEEEECCcc-ccCcCcc--cc--ccC--ccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHH
Confidence 47999999999999986 4443211 11 122 7887 5789883 23 55543 222221 11110
Q ss_pred ----------eeccCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 66 ----------FNTWMGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 ----------~~T~~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
...+..|+.+++++.++++.+.+. +..++++++.+++++.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 228 QWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC
Confidence 013578899999999999988653 46778889999999999875
No 107
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=98.76 E-value=1.3e-08 Score=75.65 Aligned_cols=101 Identities=17% Similarity=0.086 Sum_probs=68.6
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc----hhhcc---Cccccc--cccccc----cc----
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS----KKMQL---GGYFLK--PEFVPQ----QA---- 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg~---gG~~~~--~~~~~~----~~---- 62 (119)
++|++||+++|+||+|+ |....|+ ..+.. .|++++| |.+++ ||+++. +.+.+. ..
T Consensus 144 ~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~--~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~ 216 (367)
T 3nyt_A 144 AIASKYGIPVIEDAAQSFGASYKGK-----RSCNL--STVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQD 216 (367)
T ss_dssp HHHHHTTCCBEEECTTTTTCEETTE-----ETTSS--SSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE
T ss_pred HHHHHcCCEEEEECccccCCeECCe-----eccCC--CCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCC
Confidence 47999999999999986 4322232 22333 4999887 99963 455553 222110 00
Q ss_pred -----cceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 63 -----YRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 63 -----~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
...+.++..+++.++++++.++.++ ++.++.+++.+++++.|+++.
T Consensus 217 ~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~~~~~L~~~~ 267 (367)
T 3nyt_A 217 RRYHHIRVGVNSRLDTLQAAILLPKLEIFE--EEIALRQKVAAEYDLSLKQVG 267 (367)
T ss_dssp ETTEECSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHTT
T ss_pred cCceeeccCcCCCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCC
Confidence 1123477899999999999988774 466778888999999998873
No 108
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.74 E-value=1.6e-08 Score=75.95 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=67.1
Q ss_pred ChhhhhCCEEEEccccccccCCCc---chhhh-hcCCCCCCCEE---EEchhhc-cC---ccc---ccc-c----ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK---FWCHE-HFDLEESPDIV---TFSKKMQ-LG---GYF---LKP-E----FVPQQ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~---~~~~~-~~g~~~~pDi~---t~gK~lg-~g---G~~---~~~-~----~~~~~ 61 (119)
++|++||+++|+||++.+++..+. ..... ..+.. ++++ +|||.+| .| |++ ..+ . +....
T Consensus 210 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~ 287 (409)
T 4eu1_A 210 DVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV--PNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQL 287 (409)
T ss_dssp HHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS--SCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC--CcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHH
Confidence 479999999999999988865552 22222 22443 5654 8999986 45 663 332 3 33221
Q ss_pred ccc-eeeccCCCHHHHHHHHHHHHHH-------h-hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 AYR-VFNTWMGDPGKVLLLKGIIDTI-------H-NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~~~-~~~T~~~~p~~~a~a~a~l~~i-------~-~~~~~~~~~~~g~~l~~~L~~l 109 (119)
... ..+++..++++..++.++|+.. + -++.+++++++.+++.+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 288 ALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 1345456788888887777632 1 1345667788888888888775
No 109
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.73 E-value=8.8e-08 Score=70.58 Aligned_cols=101 Identities=19% Similarity=0.122 Sum_probs=67.4
Q ss_pred ChhhhhC--CEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc-cC-ccccc-ccc--cccccc----ceee
Q psy4800 1 MYEKYHG--SALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ-LG-GYFLK-PEF--VPQQAY----RVFN 67 (119)
Q Consensus 1 ~l~~~~~--~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg-~g-G~~~~-~~~--~~~~~~----~~~~ 67 (119)
++|++|| +++|+||+|+ +|.... ..+ ... +|+++++ |.+| .| |++.. +.+ ...... ....
T Consensus 163 ~l~~~~~~~~~li~Dea~~-~~~~~~--~~~--~~~--~di~~~s~sK~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T 1eg5_A 163 RIVKKKNKETLVHVDAVQT-IGKIPF--SLE--KLE--VDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLR 235 (384)
T ss_dssp HHHHHHCTTCEEEEECTTT-TTTSCC--CCT--TTC--CSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTB
T ss_pred HHHHhcCCceEEEEEhhhh-cCCccc--Cch--hcC--CCEEEecHHHhcCCCceEEEEEcCCCccccccccCccccccc
Confidence 4799999 9999999976 654321 111 223 8999777 9886 33 55543 233 221111 1124
Q ss_pred ccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
++..++++++++.++|+.+.+ ++..++++++.+++.+.|++
T Consensus 236 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 278 (384)
T 1eg5_A 236 SGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN 278 (384)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC
Confidence 557889999999999988654 35677788889999998876
No 110
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.72 E-value=1.2e-08 Score=76.36 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=59.0
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc--cccccccc--ceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP--EFVPQQAY--RVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~--~~~~~~~~--~~~~T~~~ 71 (119)
++|++||+++|+||+|. |+...|... +....+|++ +++|+++ -||+++.. .+...... ..+.+.+.
T Consensus 194 ~l~~~~~~~li~De~~~~g~~~~~~~~-----~~~~~~di~~~s~sK~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (425)
T 3ecd_A 194 AIADSVGAKLMVDMAHIAGVIAAGRHA-----NPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKINSAVFPGLQGGP 268 (425)
T ss_dssp HHHHHHTCEEEEECGGGHHHHHTTSSC-----CGGGTCSEEEEESSGGGCCCSCEEEEESCHHHHHHHHHHHC-----CC
T ss_pred HHHHHcCCEEEEECcChHhhhhccccc-----CchhcCcEEEecCCcccCCCCcEEEEeCCHHHHHHHHhhhCccccCCc
Confidence 48999999999999974 554444321 111126887 5669994 25666543 23221111 11112123
Q ss_pred CH-HHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DP-GKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p-~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++ ..++++.+..+.+++ +++.++++++.+++++.|++.
T Consensus 269 ~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 269 LMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 344444444444433 367788899999999999874
No 111
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.72 E-value=2.9e-08 Score=75.65 Aligned_cols=100 Identities=15% Similarity=0.041 Sum_probs=63.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Cccccc--c-cc--------ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLK--P-EF--------VPQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~--~-~~--------~~~~~ 62 (119)
++|++||+++|+||+|+++|..+... +.. +|++ +++|.+++ ||++.. + .+ .....
T Consensus 168 ~~a~~~g~~livD~~~~~~g~~~~~~-----~~~--~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~ 240 (421)
T 2ctz_A 168 QAAREKGVALIVDNTFGMGGYLLRPL-----AWG--AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQP 240 (421)
T ss_dssp HHHHHHTCEEEEECGGGGGGTSCCGG-----GGT--CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBG
T ss_pred HHHHHcCCEEEEECCcccccccCCcc-----ccC--CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccc
Confidence 47999999999999997777655443 223 8988 89999963 334443 1 11 11000
Q ss_pred ccee-----------------------eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRVF-----------------------NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~~-----------------------~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+. .....+|+.+++++..++.+. ...++..++.+++.+.|++.
T Consensus 241 g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~ 308 (421)
T 2ctz_A 241 GYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLS--LRAERHVENTLHLAHWLLEQ 308 (421)
T ss_dssp GGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHH--HHHHHHHHhHHHHHHHHHhC
Confidence 0000 122678999888888887764 23445557778888888763
No 112
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.70 E-value=1.6e-08 Score=78.54 Aligned_cols=105 Identities=11% Similarity=-0.032 Sum_probs=56.3
Q ss_pred ChhhhhCCEEEEccccccc-----cCCCc---chhhhhcCCCCCCCEE--EEchhhcc---Cccc-cccc-cccc----c
Q psy4800 1 MYEKYHGSALLIDEVQTGG-----GPCGK---FWCHEHFDLEESPDIV--TFSKKMQL---GGYF-LKPE-FVPQ----Q 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~-----Gr~G~---~~~~~~~g~~~~pDi~--t~gK~lg~---gG~~-~~~~-~~~~----~ 61 (119)
++|++||++||+||+|+|+ +++|. .+.....+ .|++ +++|.+.+ .|++ ..+. +... .
T Consensus 263 ~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g----~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~ 338 (514)
T 3mad_A 263 ALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEG----VTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIA 338 (514)
T ss_dssp HHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTT----CCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEE
T ss_pred HHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCC----CcEEEECchhccCCCCCeEEEEEeCHHHhccccccc
Confidence 4899999999999999875 34443 22233334 4666 45598621 1222 2221 1110 0
Q ss_pred c-----cceeecc--CCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 A-----YRVFNTW--MGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~-----~~~~~T~--~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
. .....++ ..+.....+..++++.+.+ ++..+++.++.+++++.|+++
T Consensus 339 ~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 396 (514)
T 3mad_A 339 ADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAI 396 (514)
T ss_dssp SSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 0 0000111 1222233344455555543 456778888999999999874
No 113
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.70 E-value=2.9e-08 Score=73.73 Aligned_cols=102 Identities=12% Similarity=0.043 Sum_probs=61.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC-cccccc-ccccc-cccce---------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG-GYFLKP-EFVPQ-QAYRV--------- 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g-G~~~~~-~~~~~-~~~~~--------- 65 (119)
++|++||+++|+||+|+ +|... ...... . +|++ +++|.+| .| |++..+ .+.+. .+...
T Consensus 188 ~l~~~~~~~li~D~~~~-~g~~~--~~~~~~--~--~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (406)
T 1kmj_A 188 TLAHQHGAKVLVDGAQA-VMHHP--VDVQAL--D--CDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVS 260 (406)
T ss_dssp HHHHHTTCEEEEECTTT-TTTSC--CCHHHH--T--CSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEEEEE
T ss_pred HHHHHcCCEEEEEchhh-cCCCC--Cccccc--C--CCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCceeecc
Confidence 47999999999999986 44432 112222 3 7886 6999986 34 555432 22211 00000
Q ss_pred ------------eeccCCCHHHHHHHH-HHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 66 ------------FNTWMGDPGKVLLLK-GIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 ------------~~T~~~~p~~~a~a~-a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.+.+++...+++ ++++.+++. ++.++++++.+++.+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (406)
T 1kmj_A 261 LSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV 320 (406)
T ss_dssp TTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC
Confidence 111234555555555 788888653 56677888888888888764
No 114
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.69 E-value=5.2e-08 Score=72.43 Aligned_cols=102 Identities=18% Similarity=0.088 Sum_probs=67.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhcc-C--ccccc-cccccc-------cccce--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQL-G--GYFLK-PEFVPQ-------QAYRV-- 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg~-g--G~~~~-~~~~~~-------~~~~~-- 65 (119)
++|++||+++|+||+++ +|..... . .... +|+++++ |++++ + |++.. +.+.+. .....
T Consensus 183 ~l~~~~~~~li~Dea~~-~g~~~~~--~--~~~~--~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
T 1vjo_A 183 ELCREFGTLLLVDTVTS-LGGVPIF--L--DAWG--VDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLD 255 (393)
T ss_dssp HHHHHHTCEEEEECTTT-TTTSCCC--T--TTTT--CSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTC
T ss_pred HHHHHcCCEEEEECCcc-ccCcCCc--c--cccC--ccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecC
Confidence 47999999999999987 6643211 1 1233 8999666 99852 2 34332 222211 01111
Q ss_pred -----------eecc-CCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 66 -----------FNTW-MGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 -----------~~T~-~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++ +.|+++++++.++|+.+.+ ++..++++++.+++.+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 256 MNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc
Confidence 2233 6789999999999998754 356778899999999999875
No 115
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.67 E-value=1.3e-08 Score=76.47 Aligned_cols=107 Identities=14% Similarity=0.078 Sum_probs=64.8
Q ss_pred ChhhhhCCEEEEccccccccCCC---cchhhhh-cCCCCCC---C---EEEEchhhcc-C---cccc--c-----c-c--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG---KFWCHEH-FDLEESP---D---IVTFSKKMQL-G---GYFL--K-----P-E-- 56 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G---~~~~~~~-~g~~~~p---D---i~t~gK~lg~-g---G~~~--~-----~-~-- 56 (119)
++|++||+++|+||++.+++..| ....... .... + + +.+++|.+|. | |++. . + .
T Consensus 203 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~ 280 (412)
T 1yaa_A 203 DAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL--STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIK 280 (412)
T ss_dssp HHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT--TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHH
T ss_pred HHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC--CCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHH
Confidence 37999999999999998885544 2212211 1112 3 2 3389999963 4 5554 3 2 2
Q ss_pred --ccccccc-ceeeccCCCHHHHHHHHHHHHHHh--------hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 57 --FVPQQAY-RVFNTWMGDPGKVLLLKGIIDTIH--------NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 57 --~~~~~~~-~~~~T~~~~p~~~a~a~a~l~~i~--------~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+...... ....+...++++.+++.++|+... -++..++++++.+++.+.|+++
T Consensus 281 ~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1yaa_A 281 PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3322111 112233458888888888887542 1345666777888888888765
No 116
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.6e-08 Score=77.38 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=61.2
Q ss_pred ChhhhhCCEEEEcccc-ccccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc-ccccc-cccceeeccCC-C
Q psy4800 1 MYEKYHGSALLIDEVQ-TGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP-EFVPQ-QAYRVFNTWMG-D 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~-tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~-~~~~~-~~~~~~~T~~~-~ 72 (119)
++|++||++||+||+| +|+...|... +.....|++ +++|+++ -||++..+ .+.+. .......++++ +
T Consensus 207 ~l~~~~g~lli~Dea~~~g~~~~g~~~-----~~~~~~di~~~s~sK~l~G~~gG~i~~~~~~~~~l~~~~~~~~~~~~~ 281 (447)
T 3h7f_A 207 SIADEVGAKLLVDMAHFAGLVAAGLHP-----SPVPHADVVSTTVHKTLGGGRSGLIVGKQQYAKAINSAVFPGQQGGPL 281 (447)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTSSC-----CSTTTCSEEEEESSGGGCCCSCEEEEECGGGHHHHHHHHTTTTCSSCC
T ss_pred HHHHHcCCEEEEECCchhhhhcCCCCC-----CCCCCCcEEEecCCcCCCCCCeEEEEECHHHHHHHhhhcCCcccCCcc
Confidence 4899999999999998 4554444321 111125777 7799995 26776543 33321 11111122232 2
Q ss_pred HHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
+..++++.+++..+.+ +++.+++.++.+++.+.|++.
T Consensus 282 ~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 282 MHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3334555555655543 246778889999999998765
No 117
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.65 E-value=8.1e-08 Score=70.92 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=67.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhcc--C-ccccc-ccccccc-------------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQL--G-GYFLK-PEFVPQQ------------- 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg~--g-G~~~~-~~~~~~~------------- 61 (119)
++|++||+++|+||++. +|... .... ... +|+++++ |++++ | |++.. +.+.+..
T Consensus 170 ~l~~~~~~~li~D~a~~-~~~~~--~~~~--~~~--~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
T 2dr1_A 170 KVAKEHDKLVFVDAVSA-MGGAD--IKFD--KWG--LDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIP 242 (386)
T ss_dssp HHHHHTTCEEEEECTTT-BTTBC--CCTT--TTT--CSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHH
T ss_pred HHHHHcCCeEEEEcccc-ccCcc--cccc--ccC--CcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHH
Confidence 47999999999999975 43321 1111 122 7998766 99962 2 44443 2222110
Q ss_pred ---cc---ceeeccCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 62 ---AY---RVFNTWMGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ---~~---~~~~T~~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
.. ....+++.|+++++++.++|+.+.+. +..++++++.+++.+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 243 LYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI 300 (386)
T ss_dssp HHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 00 12345578899999999999988654 57778899999999999875
No 118
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.65 E-value=2.1e-07 Score=69.63 Aligned_cols=102 Identities=9% Similarity=0.047 Sum_probs=66.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc---cC-ccccc-cccccc-cc---c------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ---LG-GYFLK-PEFVPQ-QA---Y------ 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg---~g-G~~~~-~~~~~~-~~---~------ 63 (119)
++|++||+++|+||+|+ +|..... .+.++ +|++++ +|.+. .+ |++.. +.+.+. .+ .
T Consensus 189 ~l~~~~~~~li~D~a~~-~g~~~~~--~~~~~----~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~ 261 (416)
T 1qz9_A 189 ALSHECGALAIWDLAHS-AGAVPVD--LHQAG----ADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSR 261 (416)
T ss_dssp HHHHHHTCEEEEECTTT-TTTSCCC--HHHHT----CSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCT
T ss_pred HHHHHcCCEEEEEcccc-ccCcCCC--hhhcC----CCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCcccc
Confidence 47999999999999985 5544321 22232 798866 59972 23 44432 223211 11 0
Q ss_pred --------------ceeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 --------------RVFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 --------------~~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.....|+.+++++.++++.+.+ +++.++++++.+++++.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 324 (416)
T 1qz9_A 262 QFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQR 324 (416)
T ss_dssp TSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 0112224688888888899998864 356788899999999999876
No 119
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=98.63 E-value=7.6e-08 Score=71.38 Aligned_cols=101 Identities=14% Similarity=0.038 Sum_probs=65.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc----hhhcc---Ccccccc--cccc-------c----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS----KKMQL---GGYFLKP--EFVP-------Q---- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg~---gG~~~~~--~~~~-------~---- 60 (119)
++|++||+++|+||+|+ +|.. +..+..+.. +|+++++ |++++ ||++... .+.+ .
T Consensus 145 ~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~--~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~ 218 (373)
T 3frk_A 145 RIAKKYNLKLIEDAAQA-HGSL---YKGMKVGSL--GDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEK 218 (373)
T ss_dssp HHHHHHTCEEEEECTTC-TTCE---ETTEETTSS--SSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSB
T ss_pred HHHHHcCCEEEEECCcc-cCCE---ECCEecccc--ccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCccc
Confidence 47999999999999986 2211 122334544 7999888 99963 4555532 1211 0
Q ss_pred --cccceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 61 --QAYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 --~~~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.....+.++..+++.++++...++.++ +..++.+++.+++++.|+++
T Consensus 219 ~~~~~~~g~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 267 (373)
T 3frk_A 219 KYHHIYKGFNSRLDELQAGFLRVKLKYLD--KWNEERRKIAQKYIAGINNP 267 (373)
T ss_dssp TTBCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHCCCT
T ss_pred CCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 011123455778998888877776654 46677888888888888765
No 120
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.62 E-value=9.3e-08 Score=71.35 Aligned_cols=102 Identities=15% Similarity=0.029 Sum_probs=61.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc--cCcccccc-cccc----ccccc-------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ--LGGYFLKP-EFVP----QQAYR------- 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg--~gG~~~~~-~~~~----~~~~~------- 64 (119)
++|++||+++|+||+|+ +|.... ....++ +|+++++ |.+| +.|++..+ .+.+ .....
T Consensus 193 ~l~~~~~~~li~D~a~~-~~~~~~--~~~~~~----~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (420)
T 1t3i_A 193 QLAHQAGAKVLVDACQS-APHYPL--DVQLID----CDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVF 265 (420)
T ss_dssp HHHHHTTCEEEEECTTT-TTTSCC--CHHHHT----CSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEEC
T ss_pred HHHHHcCCEEEEEhhhc-cCCccC--chhhcC----CCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCcccccc
Confidence 47999999999999975 444321 122233 7988766 9775 23555432 2221 11000
Q ss_pred ----------eeeccCCCHHHHHHHHH-HHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 ----------VFNTWMGDPGKVLLLKG-IIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ----------~~~T~~~~p~~~a~a~a-~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+++.+++...++++ +++.+++ +++.++.+++.+++.+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 324 (420)
T 1t3i_A 266 FDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQI 324 (420)
T ss_dssp SSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 00122455565555554 7888765 456777888899999998875
No 121
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.62 E-value=3.1e-08 Score=74.86 Aligned_cols=105 Identities=12% Similarity=0.021 Sum_probs=65.4
Q ss_pred Chhhh-----hCCEEEEccccccccCCCcc--hhh-hhcCCCCCCC------EEEEchhhc-cC---ccccc---c-ccc
Q psy4800 1 MYEKY-----HGSALLIDEVQTGGGPCGKF--WCH-EHFDLEESPD------IVTFSKKMQ-LG---GYFLK---P-EFV 58 (119)
Q Consensus 1 ~l~~~-----~~~lli~DEv~tG~Gr~G~~--~~~-~~~g~~~~pD------i~t~gK~lg-~g---G~~~~---~-~~~ 58 (119)
++|++ ||+++|+||+++++...|.. ... ...+.. ++ +.+++|.+| .| |++.. + .+.
T Consensus 216 ~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~ 293 (430)
T 2x5f_A 216 EAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLH--SNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTK 293 (430)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTC--CTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHH
T ss_pred HHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhcc--CCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHH
Confidence 37889 99999999999987665542 111 222322 44 348999996 33 45443 2 232
Q ss_pred ccc-ccce----eeccCCCHHHHHHHHHHHH----HHhh-hcHHHHHHHHHHHHHHHHH
Q psy4800 59 PQQ-AYRV----FNTWMGDPGKVLLLKGIID----TIHN-ENLLDRVQKTGDILLNVRL 107 (119)
Q Consensus 59 ~~~-~~~~----~~T~~~~p~~~a~a~a~l~----~i~~-~~~~~~~~~~g~~l~~~L~ 107 (119)
+.. .... .++++.|+++++++.++|+ ++++ ++..++++++.+++.+.|+
T Consensus 294 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 294 EVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 1111 2567889999999999988 3332 2355667777777777776
No 122
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.62 E-value=8.2e-08 Score=70.87 Aligned_cols=104 Identities=12% Similarity=0.025 Sum_probs=59.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC--cccc-cccccc----c-cccc-------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG--GYFL-KPEFVP----Q-QAYR------- 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g--G~~~-~~~~~~----~-~~~~------- 64 (119)
++|++||+++|+||+|++.++. +..+.++++ +.+.+++|+++ .. |++. .+.+.. . ...+
T Consensus 168 ~l~~~~~~~li~D~~~~~~~~~---~~~~~~~~d--~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
T 3f0h_A 168 EFCKKNNMFFVCDCVSAFLADP---FNMNECGAD--VMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDA 242 (376)
T ss_dssp HHHHHTTCEEEEECTTTTTTSC---CCHHHHTCS--EEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHH
T ss_pred HHHHHcCCEEEEEcCccccCcc---ccccccCcc--EEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHH
Confidence 4799999999999998755443 233445543 44446779995 12 2322 222211 0 0110
Q ss_pred ------eeeccCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 65 ------VFNTWMGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ------~~~T~~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.+..+..+++++.++++.++++ +..++.+++.+++++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 1123345555667788889888764 34445556666666666543
No 123
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.59 E-value=5.9e-08 Score=71.41 Aligned_cols=101 Identities=10% Similarity=0.017 Sum_probs=67.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc---Cccccc-cccccc--cccce--ee---
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL---GGYFLK-PEFVPQ--QAYRV--FN--- 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~---gG~~~~-~~~~~~--~~~~~--~~--- 67 (119)
++|++||+++|+||+|+. |..+. ....++ +|++ +++|++++ .|++.. +.+.+. .+... ..
T Consensus 171 ~~~~~~~~~li~D~a~~~-~~~~~--~~~~~~----~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (371)
T 2e7j_A 171 KVCSEYDVPLLVNGAYAI-GRMPV--SLKEIG----ADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVE 243 (371)
T ss_dssp HHHHTTTCCEEEECTTTB-TTBCC--CHHHHT----CSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGG
T ss_pred HHHHHcCCeEEEECcccc-CCCCC--ChhhcC----CCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcccccc
Confidence 479999999999999764 34332 122333 6776 56999852 244432 333222 11111 12
Q ss_pred --ccCCCHHHHHHHHHHHHHHhhhcHHHHH--HHHHHHHHHHHHhh
Q psy4800 68 --TWMGDPGKVLLLKGIIDTIHNENLLDRV--QKTGDILLNVRLGL 109 (119)
Q Consensus 68 --T~~~~p~~~a~a~a~l~~i~~~~~~~~~--~~~g~~l~~~L~~l 109 (119)
++..++..++++.++++.+++ ++.+++ +++.+++.+.|+++
T Consensus 244 ~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 244 LLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp GTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHT
T ss_pred cccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 556788888888899998876 667788 88999999999875
No 124
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=98.59 E-value=1.3e-07 Score=71.36 Aligned_cols=102 Identities=16% Similarity=-0.022 Sum_probs=66.8
Q ss_pred ChhhhhC----------CEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhc-cCccccc-ccc-cc-cccc-
Q psy4800 1 MYEKYHG----------SALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ-LGGYFLK-PEF-VP-QQAY- 63 (119)
Q Consensus 1 ~l~~~~~----------~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg-~gG~~~~-~~~-~~-~~~~- 63 (119)
++|++|+ +++|+||+| ++|+.... .... . +|+++ ++|.+| ..|++.. +.+ .. ..+.
T Consensus 199 ~l~~~~~~~~~~~~~~~~~livDea~-~~~~~~~~--~~~~--~--~d~~~~s~~K~~g~~~G~~~~~~~~~~~~~~~~~ 271 (432)
T 3a9z_A 199 RRIKALNQIRAASGLPRVLVHTDAAQ-ALGKRRVD--VEDL--G--VDFLTIVGHKFYGPRIGALYVRGVGKLTPLYPML 271 (432)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEECTT-TTTTSCCC--HHHH--C--CSEEEEEGGGTTCCSCEEEEETTBTTTBCCCCSC
T ss_pred HHHHhcCcccccccCCceEEEEEchh-hhCCcccC--hhhc--C--CCEEEEehhHhcCCcceEEEEccccccCCcCcee
Confidence 4789999 999999998 56554211 1112 2 78875 499875 3455443 222 11 1111
Q ss_pred ------ceeeccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 ------RVFNTWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 ------~~~~T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.++..|+.+++++.++++.+++ ++..++++++.+++.+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 325 (432)
T 3a9z_A 272 FGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAE 325 (432)
T ss_dssp CSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 1123446788888888899998765 467778889999999999875
No 125
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.59 E-value=6.8e-08 Score=72.26 Aligned_cols=104 Identities=14% Similarity=0.044 Sum_probs=62.6
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc--hhhc--cCcccccc--cccccc-c-cceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ--LGGYFLKP--EFVPQQ-A-YRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg--~gG~~~~~--~~~~~~-~-~~~~~T~~~ 71 (119)
++|++||+++|+||+|. |+-..|. +.......|+++++ |+++ -||+++.. .+.+.. . ...+.+.+.
T Consensus 186 ~l~~~~~~~li~Dea~~~g~~~~~~-----~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (417)
T 3n0l_A 186 EIADEIGAYLFADIAHIAGLVVAGE-----HPSPFPYAHVVSSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGP 260 (417)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTS-----SCCCTTTCSEEEEESSTTTCSCSCEEEEESCHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHcCCEEEEECccchhhhhccc-----CCCccccceEEEeeCccccCCCCeeEEEECCHHHHHHHhhhhCCcccCCc
Confidence 48999999999999974 3211111 11111126898766 9984 25666543 333221 1 112223345
Q ss_pred CHHHHHHHHHHHHHHh-h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIH-N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~-~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
++..+++..++++... + +++.++++++.+++.+.|++.
T Consensus 261 ~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (417)
T 3n0l_A 261 LMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR 301 (417)
T ss_dssp CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 6777777777777643 2 356677888888999988873
No 126
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.58 E-value=2.7e-07 Score=68.16 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=63.0
Q ss_pred Chhh----hhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhc--cC-ccccc-cccccc-ccc------
Q psy4800 1 MYEK----YHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ--LG-GYFLK-PEFVPQ-QAY------ 63 (119)
Q Consensus 1 ~l~~----~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg--~g-G~~~~-~~~~~~-~~~------ 63 (119)
++|+ +||+++|+||+|+ +|..... . .... +|+++ ++|.+. .| |++.. +.+.+. .+.
T Consensus 178 ~l~~~~~~~~~~~li~Dea~~-~g~~~~~--~--~~~~--~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~ 250 (390)
T 1elu_A 178 AVCRRHQGNYPVRVLVDGAQS-AGSLPLD--F--SRLE--VDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRS 250 (390)
T ss_dssp HHHHHCCSSSCCEEEEECTTT-BTTBCCC--T--TTSC--CSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTT
T ss_pred HHHhhhhhhcCcEEEEEcccc-cCCcCCC--h--hhcC--CCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCc
Confidence 3688 9999999999985 5544211 1 1223 89885 999552 12 44332 223221 110
Q ss_pred ----------------ceeeccCCCHHHHHHHHHHHHHHhhhc----HHHHHHHHHHHHHHHHHhh
Q psy4800 64 ----------------RVFNTWMGDPGKVLLLKGIIDTIHNEN----LLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 ----------------~~~~T~~~~p~~~a~a~a~l~~i~~~~----~~~~~~~~g~~l~~~L~~l 109 (119)
..+.+...|+.+++++.++++.+++++ ..++++++.+++.+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (390)
T 1elu_A 251 ITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQL 316 (390)
T ss_dssp EEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 011233467888888888999886543 5667788888888888764
No 127
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.58 E-value=3.7e-08 Score=74.41 Aligned_cols=99 Identities=13% Similarity=0.089 Sum_probs=62.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhcc-----Ccccccc--ccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQL-----GGYFLKP--EFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg~-----gG~~~~~--~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+|+.. ... ...+.. +|+++ ++|.+++ +|++... .+.+. .......++.
T Consensus 175 ~la~~~g~~li~D~~~~~~-~~~-----~~~~~~--~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 246 (392)
T 3qhx_A 175 QLGADSSAKVLVDNTFASP-ALQ-----QPLSLG--ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAV 246 (392)
T ss_dssp HHHHHHTCEEEEECTTTCT-TTC-----CGGGGT--CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCEEEEECCCccc-ccC-----ChHHhC--CcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCC
Confidence 4799999999999998621 111 222333 89886 9999963 3444432 23221 1122334567
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|+.+++++..++.+.. ..++..++.+++.+.|++.
T Consensus 247 ~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~~~ 283 (392)
T 3qhx_A 247 PGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLAEH 283 (392)
T ss_dssp CCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcC
Confidence 889999988887776542 3456677777777777653
No 128
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.56 E-value=4.6e-08 Score=73.17 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=61.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-C----ccccc-c-ccccc-cccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-G----GYFLK-P-EFVPQ-QAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-g----G~~~~-~-~~~~~-~~~~~~~T~~ 70 (119)
++|++||+++|+||+|+++... ... .++ +|++ +++|++++ + |++.. + .+.+. .+.....+..
T Consensus 161 ~l~~~~~~~li~De~~~~~~~~-~~~---~~~----~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~ 232 (386)
T 1cs1_A 161 HLAREVGAVSVVDNTFLSPALQ-NPL---ALG----ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_dssp HHHHHTTCEEEEECTTTCTTTC-CGG---GGT----CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCB
T ss_pred HHHHHcCCEEEEECCCcccccC-Ccc---ccC----ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 4799999999999999865332 221 233 5665 89999862 2 44443 2 33322 1122223456
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|+++.++.++++.+. +..+++.++.+.+.+.|+++
T Consensus 233 ~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 269 (386)
T 1cs1_A 233 GGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_dssp CCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 89999888877776553 34455666666777766653
No 129
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.56 E-value=4e-08 Score=72.10 Aligned_cols=102 Identities=15% Similarity=-0.009 Sum_probs=62.2
Q ss_pred hhCCEEEEccccccccCCCcc---hh-hhhc-CCCCCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCCHH
Q psy4800 5 YHGSALLIDEVQTGGGPCGKF---WC-HEHF-DLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGDPG 74 (119)
Q Consensus 5 ~~~~lli~DEv~tG~Gr~G~~---~~-~~~~-g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~p~ 74 (119)
+||+++|+||+++++...|.. .. ...+ +.. +.+.+++|.+| .| |++..+ .+.+..... ...++.|++
T Consensus 171 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (354)
T 3ly1_A 171 PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENI--ILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY-VAGEKINFS 247 (354)
T ss_dssp CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSE--EEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG-TTCSCCCHH
T ss_pred CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCE--EEEeeChhhccChhhhheeeecCHHHHHHHHHh-cCCCCCCHH
Confidence 499999999999987666541 11 1222 222 44558999996 33 444432 232211111 112578999
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 75 KVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 75 ~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.+++.++|+..+. ++..++++++.+++++.|+++
T Consensus 248 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 248 GVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999888874421 345566777777888887765
No 130
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.54 E-value=1.2e-07 Score=70.06 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=64.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc----hhhcc---Ccccccc--cccc----cc------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS----KKMQL---GGYFLKP--EFVP----QQ------ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg~---gG~~~~~--~~~~----~~------ 61 (119)
++|++||+++|+||+|+ +|. .+..+..+.. +|+++++ |++++ ||+++.. .+.. ..
T Consensus 146 ~~~~~~~~~li~D~~~~-~g~---~~~~~~~~~~--~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~ 219 (374)
T 3uwc_A 146 KIAKKHNLHIVEDACQT-ILG---RINDKFVGSW--GQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLIN 219 (374)
T ss_dssp HHHHHTTCEEEEECTTC-TTC---EETTEETTSS--SSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEE
T ss_pred HHHHHcCCEEEEeCCCc-cCc---eeCCeecccc--ccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccc
Confidence 47999999999999986 221 1222334444 7999888 99963 4555422 2211 00
Q ss_pred c---cceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 62 A---YRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 62 ~---~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
. .....++..+++.++++...++.++ ++.++.+++.+++++.|+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~ 269 (374)
T 3uwc_A 220 RDVCVEYGINCRMDTIQAVIANRLMNQLE--TITEKRRGIAHLYDQSFVDLS 269 (374)
T ss_dssp TTEESSCCCBCBCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHTGGGT
T ss_pred cCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCC
Confidence 0 0112344568888887776665553 467788888999999888764
No 131
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.53 E-value=3.2e-07 Score=68.36 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=64.1
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc----hhhc--cCcccccc-c-ccc-------cc---
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS----KKMQ--LGGYFLKP-E-FVP-------QQ--- 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg--~gG~~~~~-~-~~~-------~~--- 61 (119)
++|++||+++|+||+|+ |.-..+ ...+.. +|+.+++ |+++ .||+++.. . +.+ ..
T Consensus 165 ~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~--~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~ 237 (391)
T 3dr4_A 165 EVARRHNLLVIEDAAEAVGATYRG-----KKSGSL--GDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDP 237 (391)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETT-----EETTSS--SSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCT
T ss_pred HHHHHcCCEEEEECcccccceECC-----eeeccc--CCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCC
Confidence 47999999999999986 321112 223333 6888888 9995 24454422 1 211 00
Q ss_pred -----ccceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 -----AYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 -----~~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.......+..+++.+++++..++.++ +..++.+++.+++++.|+++
T Consensus 238 ~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~ 288 (391)
T 3dr4_A 238 NRRYWFPIVGFNYRMTNIQAAIGLAQLERVD--EHLAARERVVGWYEQKLARL 288 (391)
T ss_dssp TSTTCCSSCCCBCBCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHGGG
T ss_pred CCcccccccccccCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcC
Confidence 01112345778888888777776654 46678888999999999876
No 132
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.52 E-value=6.1e-08 Score=72.82 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=63.2
Q ss_pred hhCCEEEEccccccccCCCcc---hhhhhcCCCCCCC---EE--EEchhhc-cC---ccccc----ccccccc----ccc
Q psy4800 5 YHGSALLIDEVQTGGGPCGKF---WCHEHFDLEESPD---IV--TFSKKMQ-LG---GYFLK----PEFVPQQ----AYR 64 (119)
Q Consensus 5 ~~~~lli~DEv~tG~Gr~G~~---~~~~~~g~~~~pD---i~--t~gK~lg-~g---G~~~~----~~~~~~~----~~~ 64 (119)
+||+++|+||++++|+..|.. +.....++. +| ++ +|+|.++ .| |++.. ..+.+.. ...
T Consensus 216 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~ 293 (413)
T 3t18_A 216 DKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLP--RNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHS 293 (413)
T ss_dssp TCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCC--TTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecccccccCChhhHHHHHHHHhhcC--CCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHh
Confidence 899999999999999887752 223333444 55 33 8999997 44 55543 2333211 111
Q ss_pred eeec-cCCCHHHHHHHHHHHHHH------hh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNT-WMGDPGKVLLLKGIIDTI------HN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T-~~~~p~~~a~a~a~l~~i------~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++ ...++++.+++.++|+.- +. ++++++++++.+++.+.|+++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 294 ARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1122 346788877777766532 11 245566777778888888765
No 133
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=98.52 E-value=4.2e-07 Score=70.12 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=64.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhcc--------Ccccc-ccccccccc-c-----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQL--------GGYFL-KPEFVPQQA-Y----- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg~--------gG~~~-~~~~~~~~~-~----- 63 (119)
++|++||+++|+||++.. +.+|.. ....++ +|++++ +|.++. .|++. .+.+.+..+ .
T Consensus 227 ~l~~~~g~~li~Dea~~~-~~~g~~-~~~~~g----~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~ 300 (474)
T 1wyu_B 227 RLCKEAGVQLYYDGANLN-AIMGWA-RPGDMG----FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERG 300 (474)
T ss_dssp HHHHHHTCEEEEEGGGGG-GTTTTC-CHHHHT----CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEEC
T ss_pred HHHHHcCCEEEEeCchhh-hhccCC-CcccCC----CcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeecc
Confidence 479999999999999852 233321 111223 899977 898851 13333 223322111 0
Q ss_pred ---c-----------eeeccCCCHHHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHHHHHhh
Q psy4800 64 ---R-----------VFNTWMGDPGKVLLLKGIIDTIHNENL---LDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 ---~-----------~~~T~~~~p~~~a~a~a~l~~i~~~~~---~~~~~~~g~~l~~~L~~l 109 (119)
+ ...++.+|+++++++.+.++.+..+.+ .+++.++.+++.+.|+++
T Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 301 EEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp SSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 113445788888888888876644433 667888999999999875
No 134
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.52 E-value=6e-08 Score=73.04 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=61.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhcc-----Ccccccc-cccc--cccccee-eccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQL-----GGYFLKP-EFVP--QQAYRVF-NTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~-----gG~~~~~-~~~~--~~~~~~~-~T~~~ 71 (119)
++|++||+++|+||+|+.+ ..+... .++.+ +.+.+++|.+++ ||++..+ .+.. ....... .+...
T Consensus 174 ~l~~~~~~~li~D~~~~~~-~~~~~~---~~~~d--~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T 1gc0_A 174 KIARKHGATVVVDNTYCTP-YLQRPL---ELGAD--LVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVL 247 (398)
T ss_dssp HHHGGGTCEEEEECTTTHH-HHCCGG---GGTCS--EEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCC
T ss_pred HHHHHcCCEEEEECCCccc-ccCCch---hhCce--EEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCC
Confidence 4799999999999998632 222221 23433 444489999962 4555433 2221 1111222 33467
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
+|+.+++++++++.+. ...++..++.+.+.+.|++
T Consensus 248 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~ 282 (398)
T 1gc0_A 248 SPHDAALLMRGIKTLN--LRMDRHCANAQVLAEFLAR 282 (398)
T ss_dssp CHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHhc
Confidence 8999988888887553 3456667777777777766
No 135
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.51 E-value=1.4e-07 Score=70.22 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=33.2
Q ss_pred cCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
+..|+.++++..++++.+.++ +..++++++.+++.+.|+++
T Consensus 266 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 266 HTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 356888888888999987654 56778889999999999875
No 136
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.51 E-value=1.4e-07 Score=70.91 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=60.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCE--EEEchhhcc-----Ccccccc-cccc-c-cccceee-cc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDI--VTFSKKMQL-----GGYFLKP-EFVP-Q-QAYRVFN-TW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi--~t~gK~lg~-----gG~~~~~-~~~~-~-~~~~~~~-T~ 69 (119)
++|++||+++|+||++.. |..+... .++ +|+ .+++|.+++ +|++..+ .+.. . .+..... +.
T Consensus 173 ~l~~~~~~~li~De~~~~-~~~~~~~---~~~----~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 173 GIAHQQGALLVVDNTFMS-PYCQQPL---QLG----ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp HHHHHTTCEEEEECTTTC-TTTCCGG---GGT----CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred HHHHHcCCEEEEECCCcc-cccCCch---hhC----CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 479999999999999862 2333221 233 565 589999852 3555432 2322 1 1112222 45
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
..+|+.++++.++|+.+. .+.++..++.+.+.+.|++
T Consensus 245 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 281 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLG--IRMERHCENALKIARFLEG 281 (398)
T ss_dssp CCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHHc
Confidence 788999999988887553 3445566677777777765
No 137
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.50 E-value=2.2e-07 Score=67.58 Aligned_cols=102 Identities=15% Similarity=0.008 Sum_probs=64.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc--cC-ccccc-cccccc-c--c-c-------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ--LG-GYFLK-PEFVPQ-Q--A-Y------- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg--~g-G~~~~-~~~~~~-~--~-~------- 63 (119)
++|++||+++|+||+| ++|+... ....++ +|++++ +|.++ .| |++.. +.+.+. . + .
T Consensus 148 ~l~~~~~~~li~D~a~-~~~~~~~--~~~~~~----~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~ 220 (353)
T 2yrr_A 148 ALAKEAGALFFLDAVT-TLGMLPF--SMRAMG----VDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARV 220 (353)
T ss_dssp HHHHHHTCEEEEECTT-TTTTSCC--CHHHHT----CSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHH
T ss_pred HHHHHcCCeEEEEcCc-ccccccc--cccccC----ceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHH
Confidence 4799999999999998 5665532 122232 688864 69773 12 44432 222211 0 0 0
Q ss_pred -----ceeeccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 64 -----RVFNTWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 -----~~~~T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
....++..|+.+++++.++++.+.++ +..++++++.+++++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 274 (353)
T 2yrr_A 221 AEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR 274 (353)
T ss_dssp HHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC
Confidence 11223356788888888899887654 46677888999999999875
No 138
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.50 E-value=1.2e-07 Score=71.22 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=62.4
Q ss_pred hhCCEEEEccccccccCCCcc---hhhhhcCCCCCCC---EE--EEchhhc-cC---ccccc----ccccccc----ccc
Q psy4800 5 YHGSALLIDEVQTGGGPCGKF---WCHEHFDLEESPD---IV--TFSKKMQ-LG---GYFLK----PEFVPQQ----AYR 64 (119)
Q Consensus 5 ~~~~lli~DEv~tG~Gr~G~~---~~~~~~g~~~~pD---i~--t~gK~lg-~g---G~~~~----~~~~~~~----~~~ 64 (119)
+||+++|+||++.+|+..|.. +.....++. +| ++ +|+|.+| .| |++.. ..+.+.. ...
T Consensus 217 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 294 (418)
T 3rq1_A 217 RNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLP--KEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKST 294 (418)
T ss_dssp SCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCC--TTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccccccCChHHHHHHHHHHHhcC--CCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHH
Confidence 899999999999998776642 223333454 66 33 8999986 34 55543 2333211 111
Q ss_pred eeec-cCCCHHHHHHHHHHHHHH------hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNT-WMGDPGKVLLLKGIIDTI------HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T-~~~~p~~~a~a~a~l~~i------~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++ ...++++.+++.+.|+.. .+ .+++++++++.+++.+.|+++
T Consensus 295 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 295 SRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122 346778777777766432 11 134566778888888888776
No 139
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.49 E-value=1.3e-07 Score=69.29 Aligned_cols=103 Identities=15% Similarity=0.082 Sum_probs=62.9
Q ss_pred hhhhhCCEEEEccccccccCCCcchh-hhhcCCCCCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCCHHH
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWC-HEHFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGDPGK 75 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~-~~~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~p~~ 75 (119)
+++.+| ++|+||+|++++. +.... .+..+.. +++.+++|.+| .| |++..+ .+.+.... ...+++.|+++
T Consensus 163 l~~~~~-~li~De~~~~~~~-~~~~~~~~~~~~~--i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-~~~~~~~~~~~ 237 (335)
T 1uu1_A 163 ILKTGA-FVALDEAYYEFHG-ESYVDFLKKYENL--AVIRTFSKAFSLAAQRVGYVVASEKFIDAYNR-VRLPFNVSYVS 237 (335)
T ss_dssp HHHTTC-EEEEECTTHHHHC-CCCGGGGGTCSSE--EEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-HSCTTCSCHHH
T ss_pred HHHhCC-EEEEECcchhhcc-hhHHHHhhhCCCE--EEEecchhhcCCcccCeEEEEeCHHHHHHHHH-hcCCCCcCHHH
Confidence 566668 9999999987643 22111 1222222 44559999996 34 554432 23221110 11346789999
Q ss_pred HHHHHHHHHHHh-hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 76 VLLLKGIIDTIH-NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 76 ~a~a~a~l~~i~-~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+++.++|+..+ -++..++++++.+++.+.|+++
T Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 238 QMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999988887632 1346667788888888888775
No 140
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.48 E-value=4.3e-07 Score=67.71 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=62.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cCc-cccc-cccccc-cccc---------e
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LGG-YFLK-PEFVPQ-QAYR---------V 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~gG-~~~~-~~~~~~-~~~~---------~ 65 (119)
++|++||+++|+||+|. +|... +..+.++ +|++ +++|.+| .+| ++.. +.+.+. .+.. .
T Consensus 189 ~l~~~~~~~li~D~a~~-~g~~~--~~~~~~~----~d~~~~s~~K~~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (406)
T 3cai_A 189 KLVHDVGALVVVDHSAA-APYRL--LDIRETD----ADVVTVNAHAWGGPPIGAMVFRDPSVMNSFGSVSTNPYATGPAR 261 (406)
T ss_dssp HHHHHTTCEEEEECTTT-TTTCC--CCHHHHC----CSEEEEEGGGGTSCSCEEEEESCHHHHHTSCCCCSCTTCCGGGG
T ss_pred HHHHHcCCEEEEEcccc-cCCCC--CCchhcC----CCEEEeehhhhcCCCcCeEEEEehHHHhhcCCcccCCCCCcccc
Confidence 47999999999999985 33221 1123333 6877 5679876 334 5543 223221 1111 0
Q ss_pred eeccCCCHHHHHHHHHHHHHHhh-----------------hcHHHHHHHHHHHHHHHHHhh
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHN-----------------ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~-----------------~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.....|+.+++++.++++.+++ ++..++++++.+++.+.|+++
T Consensus 262 ~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (406)
T 3cai_A 262 LEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL 322 (406)
T ss_dssp GCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 11334688888888888988765 245566777888888888764
No 141
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.48 E-value=8.5e-08 Score=71.50 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=63.1
Q ss_pred hhhh------hCCEEEEccccccccCCCcc--hhhhhcCCCCCCCEEEEchhhc-cC---ccccc-ccccc------ccc
Q psy4800 2 YEKY------HGSALLIDEVQTGGGPCGKF--WCHEHFDLEESPDIVTFSKKMQ-LG---GYFLK-PEFVP------QQA 62 (119)
Q Consensus 2 l~~~------~~~lli~DEv~tG~Gr~G~~--~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~-~~~~~------~~~ 62 (119)
+|++ ||+++|+||+++++...|.. .....++.. +.+.+++|.+| .| |++.. +.+.. ...
T Consensus 200 ~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 277 (398)
T 3ele_A 200 LLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNT--LVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVC 277 (398)
T ss_dssp HHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSE--EEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHH
T ss_pred HHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCe--EEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHH
Confidence 6777 99999999999988666642 122223322 45558999996 33 44432 22221 000
Q ss_pred --cceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 --YRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 --~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.....++..++++..++.+.+ ++.+..++++++.+++.+.|+++
T Consensus 278 ~~~~~~~~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 278 GAGRALGYVCAPSLFQKMIVKCQ---GATGDINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp HHHHHTTCCCSCHHHHHHHTTCT---TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccccCCCHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHc
Confidence 011234566677666655444 34456678888899999999876
No 142
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.44 E-value=1.5e-07 Score=71.29 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=60.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhcc-----Ccccccc-cc---------------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQL-----GGYFLKP-EF--------------- 57 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg~-----gG~~~~~-~~--------------- 57 (119)
++|++||+++|+||+|++++..... .... +|+++ ++|.+++ ||++..+ .+
T Consensus 164 ~l~~~~~~~li~D~~~~~~~~~~~~-----~~~~--~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 164 TLAEEAGVALVVDNTFGAAGALCRP-----LAWG--AHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp HHHHHHTCEEEEECGGGTTTTSCCG-----GGGT--CSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred HHHHHcCCEEEEECCCccccccCCc-----cccC--CeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 4799999999999999755322211 2233 88885 9999952 3333332 21
Q ss_pred ------------ccccccc--eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 58 ------------VPQQAYR--VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 58 ------------~~~~~~~--~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+..+.. ....+..+|..++.+...++.+. +..++.+++.++|.+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~--~~~~~~~~~~~~l~~~L~~~ 300 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVA--LRVARMSETARFLAERLQGH 300 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHH--HHHHHHHHHHHHHHHHHHcC
Confidence 0000000 11122568888888887777663 34556678888888888763
No 143
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.43 E-value=1.1e-07 Score=70.03 Aligned_cols=102 Identities=15% Similarity=0.057 Sum_probs=59.2
Q ss_pred hhCCEEEEcccccccc---CCCc-chhh---hhcCCCCCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCC
Q psy4800 5 YHGSALLIDEVQTGGG---PCGK-FWCH---EHFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGD 72 (119)
Q Consensus 5 ~~~~lli~DEv~tG~G---r~G~-~~~~---~~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~ 72 (119)
++|+++|+||+|+++. ..+. .... ...+.. ..+.+++|.+| .| |++..+ .+.+... ....+++.|
T Consensus 183 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~ 259 (365)
T 3get_A 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV--LYLGTFSKLYGLGGLRIGYGIANANIISAFY-KLRAPFNVS 259 (365)
T ss_dssp CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTE--EEEEESSSTTSCTTTCCEEEEECHHHHHHHH-HHSCTTCSC
T ss_pred CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCE--EEEeecchHhcCcchheEEEEcCHHHHHHHH-HhcCCCCcC
Confidence 6799999999998654 2221 1111 222322 34448999986 33 444432 2322111 112345689
Q ss_pred HHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++.+++.++|+..+. ++..++++++.+++.+.|+++
T Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 260 NLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999988888874321 245556677777777777665
No 144
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.43 E-value=8e-08 Score=73.10 Aligned_cols=100 Identities=12% Similarity=0.026 Sum_probs=58.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhcc-----Cc-ccc-cc-ccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQL-----GG-YFL-KP-EFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~-----gG-~~~-~~-~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++|+||+++. +..+....+|.+ +.+.+++|.+++ || +++ .+ .+.+. .......+...
T Consensus 176 ~la~~~g~~livDe~~~~----~~~~~~~~~g~d--iv~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~ 249 (400)
T 3nmy_A 176 VIARKHGLLTVVDNTFAS----PMLQRPLSLGAD--LVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQ 249 (400)
T ss_dssp HHHHHTTCEEEEECTTTH----HHHCCGGGGTCS--EEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHcCCEEEEECCCcc----cccCChhhcCCc--EEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 479999999999999852 111111223433 444469999963 34 222 22 22211 11122334567
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 72 DPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
+|+.+..++..++.+. ...++..++.+.+.+.|++
T Consensus 250 ~~~~a~~~l~~l~~l~--~r~~~~~~~a~~l~~~L~~ 284 (400)
T 3nmy_A 250 GPFDSFLALRGLKTLP--LRMRAHCENALALAQWLET 284 (400)
T ss_dssp CHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHc
Confidence 8999888888777664 3455667777777777754
No 145
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=98.43 E-value=6.2e-07 Score=66.89 Aligned_cols=100 Identities=12% Similarity=-0.027 Sum_probs=65.9
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEchh----hc--cCcccccc--cccc-------cc--c
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFSKK----MQ--LGGYFLKP--EFVP-------QQ--A 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~gK~----lg--~gG~~~~~--~~~~-------~~--~ 62 (119)
++|++||+++|+||+|+ |.... .+.+|.. +|+.+|+|. ++ .||++..+ .+.+ .. .
T Consensus 149 ~l~~~~~~~li~D~a~~~g~~~~-----~~~~g~~--~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~ 221 (390)
T 3b8x_A 149 KIIGGRDIILLEDNCESMGATFN-----NKCAGTF--GLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTR 221 (390)
T ss_dssp HHHTTSCCEEEEECTTCTTCEET-----TEETTSS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBST
T ss_pred HHHHHcCCEEEEECcCcccCEEC-----Ccccccc--cceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCc
Confidence 47999999999999987 43211 2345666 899988763 32 24665532 2211 00 0
Q ss_pred -------------------cc----eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 -------------------YR----VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 -------------------~~----~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+ .+.++..+++.++++++.++.++ +..++.+++.+++++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~~ 289 (390)
T 3b8x_A 222 NLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP--RFISVRRKNAEYFLDKFKDH 289 (390)
T ss_dssp TSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCC
Confidence 00 12334578999999998888775 46778888999999988764
No 146
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=98.43 E-value=1.3e-07 Score=69.67 Aligned_cols=101 Identities=12% Similarity=0.017 Sum_probs=60.8
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEc--hhhc--cCccccc--ccccc----ccc-c----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFS--KKMQ--LGGYFLK--PEFVP----QQA-Y---- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~g--K~lg--~gG~~~~--~~~~~----~~~-~---- 63 (119)
++|++||+++|+||+|+ +|... ..+..+.. +|+. +++ |.++ .|+++.. ..+.+ ... .
T Consensus 142 ~l~~~~~~~li~D~a~~-~~~~~---~~~~~~~~--~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (375)
T 2fnu_A 142 KLCKKHSLSFLSDSSHA-LGSEY---QNKKVGGF--ALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKK 215 (375)
T ss_dssp HHHHHHTCEEEEECTTC-TTCEE---TTEETTSS--SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEES
T ss_pred HHHHHcCCEEEEECccc-cCCeE---CCeecccc--CCeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccc
Confidence 47999999999999986 33321 11222322 4544 778 9996 2344442 22321 110 0
Q ss_pred --------ceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 --------RVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 --------~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
....++..+++.++++...++.++ +..++.+++.+++.+.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~ 267 (375)
T 2fnu_A 216 DFFEGEVKSIGHNFRLNEIQSALGLSQLKKAP--FLMQKREEAALTYDRIFKDN 267 (375)
T ss_dssp SSSCEEESSCCCBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcC
Confidence 012234678888887776655443 46677888889999988774
No 147
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.41 E-value=3.1e-07 Score=68.55 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=62.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC---cccccc-ccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG---GYFLKP-EFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g---G~~~~~-~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||++..+...|...... .+....+++ +|+|.+| .| |++..+ .+... .+.....+++.+
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~ 268 (385)
T 1b5p_A 191 RLAVEHDFYLVSDEIYEHLLYEGEHFSPG--RVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPD 268 (385)
T ss_dssp HHHHHTTCEEEEECTTTTCBSSSCCCCGG--GTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCC
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCCHH--HcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCC
Confidence 47999999999999987653323211111 121012333 8999986 33 555433 23221 111122355678
Q ss_pred HHHHHHHHHHHHH---Hhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDT---IHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~---i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++..++.++|+. ..+ ++..++++++.+++.+.|+++
T Consensus 269 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 269 TIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8888888888753 222 245566777778888888765
No 148
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.40 E-value=4.9e-07 Score=68.31 Aligned_cols=100 Identities=16% Similarity=0.163 Sum_probs=63.1
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc----hhhc--cCcccccc--ccccc----ccc----
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS----KKMQ--LGGYFLKP--EFVPQ----QAY---- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg--~gG~~~~~--~~~~~----~~~---- 63 (119)
++|++||+++|+||+|+ |+...|.. .+.. +|+++++ |+++ .+|+++.+ .+.+. ...
T Consensus 159 ~la~~~~~~li~Dea~~~g~~~~~~~-----~~~~--~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~ 231 (424)
T 2po3_A 159 KVADEHGLRLYFDAAHALGCAVDGRP-----AGSL--GDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDL 231 (424)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEE-----TTSS--SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTC
T ss_pred HHHHHcCCEEEEECccccCCeECCee-----cccc--cCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccc
Confidence 47999999999999998 77544432 2222 6887666 9885 24665543 22210 000
Q ss_pred -----ceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 -----RVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 -----~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.++..+++.+++++..++.++ +..++.+++.+++++.|+++
T Consensus 232 ~~~~~~~g~~~~~~~~~aa~~l~~~~~~~--~~~~~~~~~~~~l~~~L~~~ 280 (424)
T 2po3_A 232 PGGSPAGGTNAKMSEAAAAMGLTSLDAFP--EVIDRNRRNHAAYREHLADL 280 (424)
T ss_dssp TTCCTTCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTCSC
T ss_pred cccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 111233457888888887766654 36677778888888887654
No 149
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.40 E-value=1.3e-06 Score=64.18 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=62.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc---cCcccc-cccccccc-------------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ---LGGYFL-KPEFVPQQ------------- 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg---~gG~~~-~~~~~~~~------------- 61 (119)
++|++||+++|+||+|+ +|... .... ... +|+++++ |+++ +.|++. .+.+....
T Consensus 151 ~l~~~~~~~li~D~a~~-~~~~~--~~~~--~~~--~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSS-VGAEE--VKAE--EWN--VDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDL 223 (384)
T ss_dssp HHHGGGEEEEEEECTTT-TTTSC--CCTT--TTT--CSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCH
T ss_pred HHHHhcCCEEEEECccc-ccCcc--cccc--ccC--CCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccH
Confidence 47999999999999975 32221 1111 112 7888655 9884 123333 22221100
Q ss_pred c------cc----eeecc-CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 62 A------YR----VFNTW-MGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~------~~----~~~T~-~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
. .. ....+ ..++..+++..++++.+.+. +..++++++.+++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 224 RNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC
Confidence 0 00 11222 45777778788889887654 57778889999999999876
No 150
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.40 E-value=3.1e-07 Score=69.84 Aligned_cols=106 Identities=15% Similarity=0.069 Sum_probs=61.6
Q ss_pred ChhhhhCCEEEEcccccc----------ccCCCcchh--hhhcCCCCCCCEEEEc-hhhc--c-Cccccc--cccccc--
Q psy4800 1 MYEKYHGSALLIDEVQTG----------GGPCGKFWC--HEHFDLEESPDIVTFS-KKMQ--L-GGYFLK--PEFVPQ-- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG----------~Gr~G~~~~--~~~~g~~~~pDi~t~g-K~lg--~-gG~~~~--~~~~~~-- 60 (119)
++|++||+++|+||+|+. +...|.... .+..+.. +|++++| |.++ + ||++.. +.+.+.
T Consensus 202 ~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~--~d~~~~S~kk~~~~~~gG~~~~~~~~~~~~~~ 279 (456)
T 2ez2_A 202 ELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSY--ADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAK 279 (456)
T ss_dssp HHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT--CSEEEEETTTTTCCSSCEEEEESCHHHHHHHH
T ss_pred HHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhccc--CCEEEEeCcccCCCCceeEEEECCHHHHHHHH
Confidence 479999999999999873 345554321 1123333 8998874 5554 2 566654 233221
Q ss_pred --cccc-eeeccC-CCHHHHHH-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 61 --QAYR-VFNTWM-GDPGKVLL-LKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 --~~~~-~~~T~~-~~p~~~a~-a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.... .++++. .++..+++ +.+.++.++ +++.++.+++.+++++.|++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 280 ELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhcC
Confidence 1111 112333 24444444 555555553 456777888889999999874
No 151
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=98.39 E-value=2.5e-07 Score=69.41 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=63.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc----hhhcc---Cccccc--cccccc----ccc----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS----KKMQL---GGYFLK--PEFVPQ----QAY---- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg~---gG~~~~--~~~~~~----~~~---- 63 (119)
++|++||+++|+||+|+ +|..... ...+.. +|+++++ |.++. +|+++. +.+.+. ...
T Consensus 172 ~l~~~~~~~li~Dea~~-~g~~~~~---~~~~~~--~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~ 245 (399)
T 2oga_A 172 ELADRHGLHIVEDAAQA-HGARYRG---RRIGAG--SSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQ 245 (399)
T ss_dssp HHHHHHTCEECEECTTC-TTCEETT---EETTCT--TCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSS
T ss_pred HHHHHcCCEEEEECccc-ccCccCC---eecccc--cCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccc
Confidence 47999999999999985 3321111 112322 7998874 99963 345443 233210 000
Q ss_pred -----ceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 -----RVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 -----~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
....++..+++.++++.++++.+++ +.++.+++.+++++.|+++
T Consensus 246 ~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~ 294 (399)
T 2oga_A 246 KYSHETKGTNSRLDEMQAAVLRIRLAHLDS--WNGRRSALAAEYLSGLAGL 294 (399)
T ss_dssp TTCCCSCCCBCCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHHHTTTC
T ss_pred cccccccccCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccC
Confidence 0123456789999999999887753 5667778888888888764
No 152
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.37 E-value=3.1e-07 Score=68.25 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=62.9
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc----hhhc--cCccccc--ccccc----ccc-----
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS----KKMQ--LGGYFLK--PEFVP----QQA----- 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg--~gG~~~~--~~~~~----~~~----- 62 (119)
++|++||+++|+||+|+ |+...|.. .+. +|+++++ |.++ .+|+++. +.+.+ ...
T Consensus 148 ~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~---~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~ 219 (393)
T 1mdo_A 148 ALGERYGIPVIEDAAHATGTSYKGRH-----IGA---RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGV 219 (393)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEE-----TTS---SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEEC
T ss_pred HHHHHcCCeEEEECccccCCeECCee-----cCC---CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcc
Confidence 47999999999999987 44333332 222 7888777 9995 2455543 22221 000
Q ss_pred ----------ccee--ec----cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 ----------YRVF--NT----WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ----------~~~~--~T----~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+ .+ +..+++.++++.+.++.++ +..++.+++.+++++.|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 280 (393)
T 1mdo_A 220 DAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD--ALNARRAAIAAQYHQAMADL 280 (393)
T ss_dssp C-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHTS
T ss_pred cchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 0110 11 3468898888888777654 45667778888999998875
No 153
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.36 E-value=2e-06 Score=63.88 Aligned_cols=99 Identities=14% Similarity=-0.011 Sum_probs=59.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhcc--Ccc-c-ccc--------ccccccc----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQL--GGY-F-LKP--------EFVPQQA---- 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg~--gG~-~-~~~--------~~~~~~~---- 62 (119)
++|++||+++|+||+|+ +|.... ..... +|+++++ |.+|. .|+ + ..+ .+.....
T Consensus 183 ~la~~~~~~li~D~a~~-~~~~~~----~~~~~---~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (400)
T 3vax_A 183 QQLRATPTYLHVDAAQG-YGKVPG----DLTTP---IDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQ 254 (400)
T ss_dssp HHHTTSSCEEEEECTTT-TTTSGG----GGGSC---CSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCT
T ss_pred HHHHhcCCEEEEEhhhh-cCCCCc----Chhhc---CcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecCCCc
Confidence 47999999999999975 332211 11121 7888655 96541 233 2 322 1111100
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHH
Q psy4800 63 YRVFNTWMGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRL 107 (119)
Q Consensus 63 ~~~~~T~~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~ 107 (119)
.....+...++.++++..++++.+.+ ++..++.+++.+++.+.|+
T Consensus 255 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (400)
T 3vax_A 255 ERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA 301 (400)
T ss_dssp GGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC
Confidence 00122335678888888888988765 4667778888888888886
No 154
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.35 E-value=7.1e-07 Score=67.85 Aligned_cols=100 Identities=14% Similarity=0.014 Sum_probs=62.2
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc----hhhc--cCcccccc-c-ccc-------cccc-
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS----KKMQ--LGGYFLKP-E-FVP-------QQAY- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g----K~lg--~gG~~~~~-~-~~~-------~~~~- 63 (119)
++|++||+++|+||+|+ |....+ +..+.. +|+++++ |+++ .||+++.+ . +.. ....
T Consensus 179 ~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~--~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~ 251 (437)
T 3bb8_A 179 RVADKYNLWLIEDCCDALGSTYDG-----KMAGTF--GDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDC 251 (437)
T ss_dssp HHHHHHTCEEEEECTTCTTCEETT-----EETTSS--SSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC
T ss_pred HHHHHcCCEEEEECccccCceECC-----eecccc--cCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccc
Confidence 47999999999999987 432222 223433 7886553 7774 34665543 1 111 0000
Q ss_pred ------------------------c--------eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 ------------------------R--------VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 ------------------------~--------~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+ .+.++..+++.++++++.|+.+ ++..++.+++.+++++.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~~ 327 (437)
T 3bb8_A 252 YCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERI--EEFVEKRKANFKYLKDALQSC 327 (437)
T ss_dssp ----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGGG
T ss_pred ccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcc
Confidence 0 1112345799999999988776 345566688888999998876
No 155
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.34 E-value=1.6e-06 Score=64.32 Aligned_cols=102 Identities=16% Similarity=0.096 Sum_probs=61.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhcc---Cccccc-cccccc---c----cc----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQL---GGYFLK-PEFVPQ---Q----AY---- 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg~---gG~~~~-~~~~~~---~----~~---- 63 (119)
++|++||+++|+||++. +|... ...+ ... +|+++++ |.+++ -|++.. +.+... . ..
T Consensus 167 ~l~~~~~~~li~Dea~~-~g~~~--~~~~--~~~--~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (396)
T 2ch1_A 167 QICHQHDCLLIVDAVAS-LCGVP--FYMD--KWE--IDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWD 239 (396)
T ss_dssp HHHHHTTCEEEEECTTT-BTTBC--CCTT--TTT--CCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGC
T ss_pred HHHHHcCCEEEEEcccc-ccCCc--cchh--hcC--cCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEec
Confidence 47999999999999976 55331 1111 122 7988765 98741 133332 221110 0 00
Q ss_pred -------------ceeeccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 64 -------------RVFNTWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 -------------~~~~T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.....+..+..+..++.++|+.+.++ +..++++++.+++.+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 240 LLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC
Confidence 01122345677788888899887543 46677888889999999876
No 156
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.33 E-value=6.1e-07 Score=66.70 Aligned_cols=109 Identities=16% Similarity=0.031 Sum_probs=58.9
Q ss_pred ChhhhhCCEEEEccccccccCCC--cchhhhhc-CCC-CCCCEEEEchhhc-cC---ccccc----ccccc----ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG--KFWCHEHF-DLE-ESPDIVTFSKKMQ-LG---GYFLK----PEFVP----QQAYR 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G--~~~~~~~~-g~~-~~pDi~t~gK~lg-~g---G~~~~----~~~~~----~~~~~ 64 (119)
++|++||+++|+||++.++...+ .......+ +.. ....+.+|+|.+| .| |++.. ..+.. .....
T Consensus 200 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~ 279 (397)
T 3fsl_A 200 EILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKAT 279 (397)
T ss_dssp HHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHH
Confidence 37999999999999998775432 11121111 111 0123348999996 34 55421 12211 11111
Q ss_pred e-eeccCCCHHHHHHHHHHHHHH------h--hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 V-FNTWMGDPGKVLLLKGIIDTI------H--NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~-~~T~~~~p~~~a~a~a~l~~i------~--~~~~~~~~~~~g~~l~~~L~~l 109 (119)
. .++...++++.+++.+.++.- + -++.+++++++.+++.+.|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 280 VRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 223234556655555555421 1 1345667788888888888776
No 157
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=98.33 E-value=5.2e-07 Score=69.38 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=58.8
Q ss_pred Chhhh--hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Ccccccc-ccccc-----cccce
Q psy4800 1 MYEKY--HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKP-EFVPQ-----QAYRV 65 (119)
Q Consensus 1 ~l~~~--~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~-~~~~~-----~~~~~ 65 (119)
++|++ ||+++|+||++..+....... .++ .|++ +++|.+|+ ||++..+ .+.+. ....+
T Consensus 193 ~la~~~~~~~~livDea~~~~~~~~~~~---~~g----~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~ 265 (431)
T 3ht4_A 193 AFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVG----ADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGI 265 (431)
T ss_dssp HHHHHHCTTCEEEEECTTCTTSSSCCGG---GTT----CSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTT
T ss_pred HHHHhhCCCCEEEEeCCChhhccCCCcc---ccC----CeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCc
Confidence 47999 999999999987653333322 123 4555 79999742 4555432 22211 11122
Q ss_pred eeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
+.+.+.++..+..++..++.+ +...++..++.+++.+.|+++.
T Consensus 266 g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 266 GAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp TTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCc
Confidence 223233233234455555554 3466778889999999998764
No 158
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=98.32 E-value=3.7e-07 Score=68.48 Aligned_cols=102 Identities=11% Similarity=0.013 Sum_probs=65.4
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEE--chhhc--cCccccc-c-cccc----cccc------
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ--LGGYFLK-P-EFVP----QQAY------ 63 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg--~gG~~~~-~-~~~~----~~~~------ 63 (119)
++|++||+++|+||+|+ |+...|.... .++ . +|+.+| +|.++ .+|++.. + .+.+ ....
T Consensus 143 ~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~ 217 (394)
T 1o69_A 143 EICKENDIVLIEDAAEALGSFYKNKALG--TFG-E--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCL 217 (394)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEETT--SSS-S--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSS
T ss_pred HHHHHcCCEEEEECcCcccceeCCcccc--ccc-C--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCc
Confidence 47999999999999998 7644443211 111 2 788888 68875 3455554 2 3221 0000
Q ss_pred -----ceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 64 -----RVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 64 -----~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+.++..+++.++.+++.++.+++ ..++++++.+++++.|+++
T Consensus 218 ~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~--~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 218 HYEHLDYGYNYRLSNVLGAIGVAQMEVLEQ--RVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp SCCCSSCCCBCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTT
T ss_pred cccccccCcccCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccc
Confidence 0111233678888888777776653 6688889999999999875
No 159
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.31 E-value=1.1e-06 Score=67.68 Aligned_cols=105 Identities=6% Similarity=-0.159 Sum_probs=56.2
Q ss_pred ChhhhhCCEEEEccccccccCC-----Ccc----hhhhhcCCCCCCCEEEE--chhhc---cCcccc-ccc-cccc----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPC-----GKF----WCHEHFDLEESPDIVTF--SKKMQ---LGGYFL-KPE-FVPQ---- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~-----G~~----~~~~~~g~~~~pDi~t~--gK~lg---~gG~~~-~~~-~~~~---- 60 (119)
++|++||++||+||+|.|+.+. |.. +.+...| .|++++ .|.+. ..|++. .+. +...
T Consensus 230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g----~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~ 305 (497)
T 3mc6_A 230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPG----VTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYV 305 (497)
T ss_dssp THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTT----CCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCC
T ss_pred HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCC----CcEEEECchhhcCCCCCceeEEecCHHHHhhhhcc
Confidence 5899999999999999865332 111 2222223 577754 48762 123332 222 1110
Q ss_pred cccceee-----cc--CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 61 QAYRVFN-----TW--MGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 ~~~~~~~-----T~--~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.+.+..+ ++ ..+....++..++++.+.++ +..+++.++.+++++.|++.
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (497)
T 3mc6_A 306 NPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQEN 364 (497)
T ss_dssp BTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111111 11 11233344556666666544 45567788888999988873
No 160
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=98.31 E-value=2.1e-06 Score=65.95 Aligned_cols=101 Identities=14% Similarity=0.029 Sum_probs=60.5
Q ss_pred ChhhhhCCEEEEccccccccCCCc-chhhhhcCCCCCCCEEEEc--hhhc---cCccccc-cccccccc----cceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK-FWCHEHFDLEESPDIVTFS--KKMQ---LGGYFLK-PEFVPQQA----YRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~-~~~~~~~g~~~~pDi~t~g--K~lg---~gG~~~~-~~~~~~~~----~~~~~T~ 69 (119)
++|++||+++|+||+|++..+.+. ....... . +|+++.+ |.++ ++|++.. +.+.+..+ ...+.+.
T Consensus 169 ~l~~~~~~~livDea~~~~~~f~~~~~~~~~~--g--~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~ 244 (446)
T 2x3l_A 169 KSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNY--Q--ADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQTS 244 (446)
T ss_dssp HHHHHTTCCEEEECTTCTTTTSTTSCCCGGGG--T--CSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHSCS
T ss_pred HHHHhcCCeEEEcchhhhhhccCCCCCChHHc--C--CCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHcCC
Confidence 479999999999999875222221 1111222 2 7998766 9763 2244432 33322101 1122343
Q ss_pred CCCHHHHHHHHHHHHHHhhh--c-HHHHHHHHHHHHHHH
Q psy4800 70 MGDPGKVLLLKGIIDTIHNE--N-LLDRVQKTGDILLNV 105 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~--~-~~~~~~~~g~~l~~~ 105 (119)
+.++..+++..++++.+++. + +.++.+++.+++++.
T Consensus 245 s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 245 SPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp SCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence 56777777777788888753 2 677788888887776
No 161
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.30 E-value=3.5e-07 Score=69.19 Aligned_cols=107 Identities=7% Similarity=-0.097 Sum_probs=58.5
Q ss_pred Chhh-hhCCEEEEccccc--cccCCCcch-hh----h---hcCCCCCCCEEEEchhhccC---ccccc-cccccc-cccc
Q psy4800 1 MYEK-YHGSALLIDEVQT--GGGPCGKFW-CH----E---HFDLEESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYR 64 (119)
Q Consensus 1 ~l~~-~~~~lli~DEv~t--G~Gr~G~~~-~~----~---~~g~~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~ 64 (119)
++|+ +||+++|+||++. +|+..|... .. + ..+.. +++.+|+|.++.| |++.. +.+... ....
T Consensus 206 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~ 283 (422)
T 3d6k_A 206 EMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRF--WFMSSTSKITHAGSGVSFFASSKENIEWYASHA 283 (422)
T ss_dssp HCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCE--EEEEESTTTSCTTSSCEEEECCHHHHHHHHHHH
T ss_pred HHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcE--EEEcChhhhcCcccceEEEEeCHHHHHHHHHHH
Confidence 3688 9999999999996 475544211 11 1 12222 5566999974232 44443 233221 1122
Q ss_pred eeeccCCCHHHHHHHHHHHHHH---hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDTI---HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~i---~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+++.|+++.+++.++|+.. .+ ++..+.++++-+++++.|++.
T Consensus 284 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (422)
T 3d6k_A 284 NVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR 333 (422)
T ss_dssp HHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2345677899888887776531 11 122333444555666666553
No 162
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.30 E-value=2.8e-06 Score=61.83 Aligned_cols=102 Identities=15% Similarity=0.081 Sum_probs=63.7
Q ss_pred Chhhhh--CCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhcc--C-cccc-ccccccc----------c-
Q psy4800 1 MYEKYH--GSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQL--G-GYFL-KPEFVPQ----------Q- 61 (119)
Q Consensus 1 ~l~~~~--~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg~--g-G~~~-~~~~~~~----------~- 61 (119)
++|++| |+++|+||+|+ +|... ...+.+ . +|+++ ++|++++ | |++. .+.+.+. .
T Consensus 145 ~l~~~~~~~~~li~D~a~~-~~~~~--~~~~~~--~--~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T 1iug_A 145 RAFKEKNPEGLVGADMVTS-LLVGE--VALEAM--G--VDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLAR 217 (352)
T ss_dssp HHHHHHCTTCEEEEECTTT-BTTBC--CCSGGG--T--CSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHH
T ss_pred HHHHhhCCCCEEEEECCcc-ccCcc--eecccc--C--eeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHH
Confidence 479999 99999999975 54331 111222 2 78774 5697631 2 4433 2222211 0
Q ss_pred ----ccceeeccCCCHHHHHHHHHHHHHHhhh--cHHHHHHHHHHHHHHHHHhh
Q psy4800 62 ----AYRVFNTWMGDPGKVLLLKGIIDTIHNE--NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ----~~~~~~T~~~~p~~~a~a~a~l~~i~~~--~~~~~~~~~g~~l~~~L~~l 109 (119)
......++..|+.+++++.++++.+++. +..++++++.+++.+.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 271 (352)
T 1iug_A 218 ELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG 271 (352)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 0011223456888888888999987654 56677888889999998875
No 163
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.29 E-value=6.7e-07 Score=68.41 Aligned_cols=107 Identities=15% Similarity=0.154 Sum_probs=60.5
Q ss_pred ChhhhhCCEEEEccccccccCCCc---chhhhhc-CCCCCCC---EEEEchhhc-cC---ccc---c--------cc---
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK---FWCHEHF-DLEESPD---IVTFSKKMQ-LG---GYF---L--------KP--- 55 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~---~~~~~~~-g~~~~pD---i~t~gK~lg-~g---G~~---~--------~~--- 55 (119)
++|++||+++|+||++.+|+..+. .+....+ +.. ++ +.+|+|.+| .| |+. . .+
T Consensus 229 ~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~ 306 (448)
T 3meb_A 229 PIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAG--VEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKAL 306 (448)
T ss_dssp HHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTT--CCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHH
T ss_pred HHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcC--CcEEEEecccccCCCccccceeeeeeeccccccccCCHHH
Confidence 479999999999999988866542 1222222 222 55 348999986 34 554 3 22
Q ss_pred --ccccccccce-eeccCCCHHHHHHHHHHHHHHh--------hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 56 --EFVPQQAYRV-FNTWMGDPGKVLLLKGIIDTIH--------NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 56 --~~~~~~~~~~-~~T~~~~p~~~a~a~a~l~~i~--------~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+........ .++...++++..++.+.|+.-+ -++..++++++-+++.+.|+++
T Consensus 307 ~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 307 SAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2322111111 2333455666666666654311 1234556677777777777765
No 164
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.29 E-value=6.2e-07 Score=67.41 Aligned_cols=99 Identities=19% Similarity=0.112 Sum_probs=59.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Cccccc-c-cccccc-ccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLK-P-EFVPQQ-AYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~-~-~~~~~~-~~~~~~T~~ 70 (119)
++|++||+++|+||+++++ ..+.. .+.. +|++ +++|.+++ +|++.. + .+.+.. ......+..
T Consensus 168 ~~~~~~~~~livD~~~~~~-~~~~~-----~~~~--~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 168 VVCHERGARLVVDATFTSP-CFLKP-----LELG--ADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp HHHHHHTCEEEEECTTTCT-TTCCG-----GGTT--CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCEEEEECCCccc-cccCc-----cccC--CeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 4799999999999998743 22222 2233 8988 79999962 355543 3 333211 111111224
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|..+.++++.++.+. ...++..++.+.+.+.|++.
T Consensus 240 ~~~~~~~~~~~~l~~l~--~r~~~~~~~~~~l~~~l~~~ 276 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLP--IRMQIHMENGLKVAKFLEQH 276 (389)
T ss_dssp CCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHcCccHHH--HHHHHHHHHHHHHHHHHHcC
Confidence 68888888887776542 23445556666666666653
No 165
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=98.29 E-value=5.5e-07 Score=66.96 Aligned_cols=102 Identities=15% Similarity=0.088 Sum_probs=60.5
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEEEEc--hhhc--cCccccc-cc-c--cccc---c------
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ--LGGYFLK-PE-F--VPQQ---A------ 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg--~gG~~~~-~~-~--~~~~---~------ 62 (119)
++|++||+++|+||+|+ |....|.. ...++ . .++.+|+ |+++ .||+++. +. + .... .
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~--i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKR--VGELD-S--IATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPR 221 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-S--CEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCT
T ss_pred HHHHHcCCEEEEecchhcCCccCCee--ccccc-c--eEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCc
Confidence 47999999999999986 44333332 11122 1 3444555 8774 3455543 22 3 1110 0
Q ss_pred ---cc----eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 ---YR----VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ---~~----~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+ .++++..+++.+++..+.++.+++ ..++.+++.+++.+.|+++
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~--~~~~~~~~~~~l~~~L~~~ 273 (388)
T 1b9h_A 222 DDRRYFHKIAGSNMRLNEFSASVLRAQLARLDE--QIAVRDERWTLLSRLLGAI 273 (388)
T ss_dssp TCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTS
T ss_pred cCccceeecccccCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccC
Confidence 00 123344688888777777766643 5667778888898888865
No 166
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=98.29 E-value=5.1e-07 Score=66.32 Aligned_cols=99 Identities=13% Similarity=0.028 Sum_probs=55.0
Q ss_pred ChhhhhCCEEEEccccc-----cccCCCcchhhhhcCCCCCCCEE--EEchhh-c-cCcccccc-ccccc----ccccee
Q psy4800 1 MYEKYHGSALLIDEVQT-----GGGPCGKFWCHEHFDLEESPDIV--TFSKKM-Q-LGGYFLKP-EFVPQ----QAYRVF 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-----G~Gr~G~~~~~~~~g~~~~pDi~--t~gK~l-g-~gG~~~~~-~~~~~----~~~~~~ 66 (119)
++|++||+++|+||++. ++|+....+. . . .|++ +++|++ + .||++..+ .+... .....+
T Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~-~--~d~~~~s~sK~~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 235 (357)
T 3lws_A 163 RYCRERGIRLHLDGARLFEMLPYYEKTAAEIA----G-L--FDSIYISFYKGLGGIAGAILAGPAAFCQTARIWKRRYGG 235 (357)
T ss_dssp HHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH----T-T--SSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCEEEEECchhhhhhhhcCCChHHHH----h-c--CCEEEEeccccCCCCceEEEEcCHHHHHHHHHHHHHhcC
Confidence 47999999999999974 2233322211 1 1 4555 999998 3 56666543 23221 111112
Q ss_pred eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++..++.+ +++.++|+... +..++..++.+++.+.|+++
T Consensus 236 ~~~~~~~~~-~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 275 (357)
T 3lws_A 236 DLISLYPYI-VSADYYYELRK--DRMGQYYEQAKQLAEQFNAL 275 (357)
T ss_dssp CCSCCHHHH-HHHHHHHHHHT--TCHHHHHHHHHHHHHHHHTS
T ss_pred CcccchHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhC
Confidence 232334444 44556666532 22344567778888888765
No 167
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.29 E-value=2.3e-06 Score=63.34 Aligned_cols=102 Identities=16% Similarity=0.042 Sum_probs=61.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc--cC-ccccc-ccccc----c---cccce--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ--LG-GYFLK-PEFVP----Q---QAYRV-- 65 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg--~g-G~~~~-~~~~~----~---~~~~~-- 65 (119)
++|++||+++|+||+|+ +|... ..... .. +|++++ +|+++ .| |++.. +.+.+ . ...+.
T Consensus 168 ~~~~~~~~~li~D~a~~-~~~~~--~~~~~--~~--~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T 2huf_A 168 ALCHQHNCLLIVDTVAS-LGGAP--MFMDR--WE--IDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWD 240 (393)
T ss_dssp HHHHHTTCEEEEECTTT-BTTBC--CCTTT--TT--CSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGC
T ss_pred HHHHHcCCEEEEEcccc-cCCCC--cchhh--cC--ccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEc
Confidence 47999999999999974 54331 11111 22 788854 59873 22 44432 22211 1 01111
Q ss_pred --------------eecc-CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 66 --------------FNTW-MGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 --------------~~T~-~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
..++ ..++.+.+++.++++.+.++ +..++++++.+++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 241 MSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 1122 34666777777788887543 46677888999999999875
No 168
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=98.29 E-value=8.5e-07 Score=65.05 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=59.8
Q ss_pred hhhhhC-CEEEEccccccccCCCcchhhhhcCCC-CCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCCHH
Q psy4800 2 YEKYHG-SALLIDEVQTGGGPCGKFWCHEHFDLE-ESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGDPG 74 (119)
Q Consensus 2 l~~~~~-~lli~DEv~tG~Gr~G~~~~~~~~g~~-~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~p~ 74 (119)
+++.++ .++|+||++..++..+.... ...+.. ....+.+|+|.++ .| |++..+ .+.+... ....+++.+++
T Consensus 154 l~~~~~~~~li~Dea~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (350)
T 3fkd_A 154 LLNDHPDTTFVLDQSYVSFTTEEVIRP-ADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVA-AFSTPWAVNAL 231 (350)
T ss_dssp HHHHCTTSEEEEECTTTTSCSSCCCCG-GGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHH-TTCCTTCSCHH
T ss_pred HHHhCCCCEEEEECchhhhccCcchhh-HHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHH-HhCCCCCCCHH
Confidence 455554 59999999988766664321 112211 0133448999996 33 554432 2322111 11235678999
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 75 KVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 75 ~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.+++.++|+...+ .+..++..++.+++.+.|+++
T Consensus 232 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 267 (350)
T 3fkd_A 232 AIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRL 267 (350)
T ss_dssp HHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999888876541 122233336667777777654
No 169
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.27 E-value=2.4e-06 Score=63.26 Aligned_cols=102 Identities=17% Similarity=0.081 Sum_probs=63.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhc--cC-ccccc-cccccc----c--c------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ--LG-GYFLK-PEFVPQ----Q--A------ 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg--~g-G~~~~-~~~~~~----~--~------ 62 (119)
++|++||+++|+||+|+ +|... ...+.+ . +|+++ ++|+++ .| |++.. +.+.+. . +
T Consensus 158 ~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~--~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~ 230 (392)
T 2z9v_A 158 ALVSAHGAYLIVDAVSS-FGGMK--THPEDC--K--ADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLS 230 (392)
T ss_dssp HHHHHTTCEEEEECTTT-BTTBS--CCGGGG--T--CSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTC
T ss_pred HHHHHcCCeEEEEcccc-cCCcc--cccccc--c--ceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceecc
Confidence 47999999999999975 44321 112222 2 78875 469774 12 44432 222110 0 0
Q ss_pred ---------cceeeccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 63 ---------YRVFNTWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ---------~~~~~T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.....+...++.+++++.++++.+.+. +..++++++.+++++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 231 IVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM 289 (392)
T ss_dssp SGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc
Confidence 011123346777888888889887653 46677889999999999875
No 170
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=98.26 E-value=2.7e-06 Score=65.85 Aligned_cols=107 Identities=7% Similarity=-0.048 Sum_probs=57.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhcc---Ccc-ccccc-cccc---cccceee--c
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQL---GGY-FLKPE-FVPQ---QAYRVFN--T 68 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg~---gG~-~~~~~-~~~~---~~~~~~~--T 68 (119)
++|++||+++++||++.|+..... +.+...+++ .+|++++ .|++++ .|+ +..+. .... ...+..+ +
T Consensus 282 ~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~-~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~ 359 (497)
T 2qma_A 282 DMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE-RAHSISVDFHKLFYQTISCGALLVNDKSNFKFLLHHADYLNREHD 359 (497)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG-GCSEEEEETTTTTCCCSSCEEEEESCGGGGGGGCC----------
T ss_pred HHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc-cCCEEEEcchhccCCCcceEEEEEeCHHHHHHhcCCchhcCCccc
Confidence 489999999999999987655444 333344551 3899977 998841 122 22322 1111 1111111 1
Q ss_pred cCCCHHHHH----------HHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVL----------LLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a----------~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
...++...+ ...++++.+..+ +..+++.++.++|.+.|+++
T Consensus 360 ~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 413 (497)
T 2qma_A 360 ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTN 413 (497)
T ss_dssp ----------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 112333221 223456665433 45667788889999988864
No 171
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=98.26 E-value=5.9e-07 Score=65.93 Aligned_cols=102 Identities=16% Similarity=-0.020 Sum_probs=55.1
Q ss_pred ChhhhhCCEEEEcccccccc--CCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc-cccccc----ccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGG--PCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP-EFVPQQ----AYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~G--r~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~-~~~~~~----~~~~~~T~ 69 (119)
++|++||+++|+||++..+. ..|... ..+... .|++ +++|+++ .||++..+ .+.+.. .....+++
T Consensus 165 ~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~--~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~~~~~~~~~~~ 240 (359)
T 3pj0_A 165 EYCHEQGISLHLDGARLWEITPFYQKSA--EEICAL--FDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLI 240 (359)
T ss_dssp HHHHHHTCEEEEEETTCGGGHHHHTCCH--HHHHTT--CSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHcCCEEEEECcchhcchhhhCCCH--HHhhcc--CCEEEEeccccCCCcceEEEECCHHHHHHHHHHHHHhCCCcc
Confidence 47999999999999974211 111111 111112 5776 8999885 34554432 233211 11122333
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++.+ +++.++++... +..++..++.+++.+.|+++
T Consensus 241 ~~~~~~-~a~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 241 SLYPYI-LSADYYFEKRI--GKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp CCHHHH-HHHHHHHHHHG--GGHHHHHHHHHHHHHHHHTS
T ss_pred hhHHHH-HHHHHHHHHHH--HHhHHHHHHHHHHHHHHhhC
Confidence 344444 33445555432 34455677888888888875
No 172
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.25 E-value=1e-06 Score=66.43 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=59.2
Q ss_pred ChhhhhCCEEEEccccccccCCCc--chhhhh-cCCCCCCC-E--EEEchhhc-cC---cccc---c-cccc----cccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK--FWCHEH-FDLEESPD-I--VTFSKKMQ-LG---GYFL---K-PEFV----PQQA 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~--~~~~~~-~g~~~~pD-i--~t~gK~lg-~g---G~~~---~-~~~~----~~~~ 62 (119)
++|++||+++|+||++.+++..+. ...... .+.. ++ + .+|+|.+| .| |++. . ..+. ....
T Consensus 222 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~ 299 (420)
T 4f4e_A 222 EVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAAN--LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLK 299 (420)
T ss_dssp HHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTT--CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcC--CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHH
Confidence 479999999999999988865431 222111 1222 23 2 38999996 34 5532 1 1221 1111
Q ss_pred cce-eeccCCCHHHHHHHHHHHHHH------hh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 YRV-FNTWMGDPGKVLLLKGIIDTI------HN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ~~~-~~T~~~~p~~~a~a~a~l~~i------~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
... .++...++++..++.+.++.- ++ ++.+++++++.+++.+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 300 RVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 223334566666655555431 11 345667778888888888775
No 173
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=98.25 E-value=1.6e-06 Score=63.15 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=54.9
Q ss_pred Chhhh-hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Cccccc-c-ccccc-ccccee-ec
Q psy4800 1 MYEKY-HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLK-P-EFVPQ-QAYRVF-NT 68 (119)
Q Consensus 1 ~l~~~-~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~-~-~~~~~-~~~~~~-~T 68 (119)
++|++ ||+++|+||+|+. |...... .++ +|++ +++|.+++ +|++.. + .+.+. .+.... .+
T Consensus 107 ~~~~~~~~~~li~D~a~~~-~~~~~~~---~~~----~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~ 178 (331)
T 1pff_A 107 KQARKQKDILVIVDNTFAS-PILTNPL---DLG----VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITG 178 (331)
T ss_dssp HHHTTSSSCEEEEECTTTH-HHHCCGG---GGT----CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred HHHhhhcCCEEEEECCCcc-cccCChh---hcC----CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcC
Confidence 47999 9999999999862 2221111 233 5655 79999862 345543 2 33322 122223 34
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRL 107 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~ 107 (119)
...+|+++.++.++++.+.. ..++..++.+.+.+.|+
T Consensus 179 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~ 215 (331)
T 1pff_A 179 AIISPHDAWLITRGTLTLDM--RVKRAAENAQKVAEFLH 215 (331)
T ss_dssp CCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHHHHHHH
Confidence 57889888887777776532 22333444444444443
No 174
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.24 E-value=1.3e-06 Score=66.50 Aligned_cols=106 Identities=16% Similarity=0.040 Sum_probs=59.1
Q ss_pred ChhhhhCCEEEEcccccc---c-------cCCCcchhhhhcC--CCCCCCEE--EEchhhc--cCcccccc---ccccc-
Q psy4800 1 MYEKYHGSALLIDEVQTG---G-------GPCGKFWCHEHFD--LEESPDIV--TFSKKMQ--LGGYFLKP---EFVPQ- 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG---~-------Gr~G~~~~~~~~g--~~~~pDi~--t~gK~lg--~gG~~~~~---~~~~~- 60 (119)
++|++||++||+||+|.. + +..|.... + .+ ....+|++ +++|++| .||++..+ .+.+.
T Consensus 211 ~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~s~sK~~g~~~Gg~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 211 EIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIK-E-VIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLA 288 (467)
T ss_dssp HHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHH-H-HHHHHGGGCSEEEEETTSTTCCSSCEEEEESSCHHHHHHH
T ss_pred HHHHHcCCEEEEEchhhhhcchhccccccccCCCchh-h-hhhhhccccceEEEeccccCCCCcceEEEeCCHHHHHHHH
Confidence 489999999999999752 1 22221100 0 00 00126765 6788876 26666533 44321
Q ss_pred ---ccc-ceeeccCCCHHHHHHHHH-HHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 61 ---QAY-RVFNTWMGDPGKVLLLKG-IIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 61 ---~~~-~~~~T~~~~p~~~a~a~a-~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
... ....++++++..+.++.+ +++.+.+++..++..++.+++++.|++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 289 RQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 111 122355666655444333 566554444566666788899999987
No 175
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.24 E-value=4.6e-07 Score=69.14 Aligned_cols=99 Identities=11% Similarity=0.080 Sum_probs=57.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhcc-----Ccccccc-cccc-ccc---cceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQL-----GGYFLKP-EFVP-QQA---YRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~-----gG~~~~~-~~~~-~~~---~~~~~T~~ 70 (119)
++|++||+++|+||+++ +|..+....+|.+ +.+.+++|.+++ +|+++.+ .... ... ..++. .
T Consensus 190 ~la~~~g~~livDe~~~----~~~~~~~~~~g~d--iv~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~--~ 261 (414)
T 3ndn_A 190 ELAHAAGAKVVLDNVFA----TPLLQQGFPLGVD--VVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGP--A 261 (414)
T ss_dssp HHHHHTTCEEEEECTTT----HHHHCCCGGGTCS--EEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCC--C
T ss_pred HHHHHcCCEEEEECCCc----ccccCCchhcCCC--eEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCC--C
Confidence 47999999999999985 2222122234543 444578899963 2444432 2211 111 11122 3
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|..++.++..++.+. ...++..++.+++.+.|++.
T Consensus 262 ~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLA--IRVQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp CCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 47888777776666553 24455667777777777654
No 176
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.23 E-value=3.4e-06 Score=62.80 Aligned_cols=40 Identities=10% Similarity=0.075 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
..|+.++++..++++.+.+. +..++++++.+++.+.|+++
T Consensus 267 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 267 TEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 55788888888899887654 67778889999999999875
No 177
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=98.22 E-value=1.2e-06 Score=68.56 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=61.3
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCccccccc-c---------------cc
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKPE-F---------------VP 59 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~~-~---------------~~ 59 (119)
++|++||++|++|++|. |+--.|.. ...+. ..|++ +++|+|+ .||++..+. + ..
T Consensus 225 ~ia~~~g~~livD~Ah~~glv~~g~~--~~~~~---~aDiv~~S~hK~l~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~ 299 (490)
T 2a7v_A 225 EVCDEVKAHLLADMAHISGLVAAKVI--PSPFK---HADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFED 299 (490)
T ss_dssp HHHHHTTCEEEEECGGGHHHHHTTSS--CCGGG---TCSEEEEESSGGGCSCSCEEEEEECSEEEEETTTEEEEECCCHH
T ss_pred HHHHHcCCEEEEccccccccccCCcC--CCCCC---CCCEEEECCcccCccccchheeeccchhcccccccchhhHHHHH
Confidence 48999999999999975 43112211 01111 26877 7899994 467776432 1 11
Q ss_pred cccccee-eccC-CCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 60 QQAYRVF-NTWM-GDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 60 ~~~~~~~-~T~~-~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
......+ .+.+ .++..+++..++++.+.+ +++.+++.++.++|++.|++.
T Consensus 300 ~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~ 354 (490)
T 2a7v_A 300 RINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111111 1223 344455555556766643 346678899999999999875
No 178
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.21 E-value=2.3e-06 Score=64.36 Aligned_cols=82 Identities=9% Similarity=-0.075 Sum_probs=46.7
Q ss_pred Chh-hhhCCEEEEcccccc--ccC-----CCcchhhh----hcCCCCCCCEEEEchhhccCc----cccc-cccccc-cc
Q psy4800 1 MYE-KYHGSALLIDEVQTG--GGP-----CGKFWCHE----HFDLEESPDIVTFSKKMQLGG----YFLK-PEFVPQ-QA 62 (119)
Q Consensus 1 ~l~-~~~~~lli~DEv~tG--~Gr-----~G~~~~~~----~~g~~~~pDi~t~gK~lg~gG----~~~~-~~~~~~-~~ 62 (119)
++| ++||+++|+||++.. |.. ........ ..+.. ..+.+|+|.+ .+| ++.. ..+.+. ..
T Consensus 200 ~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~S~sK~~-~~G~r~G~~~~~~~~~~~~~~ 276 (423)
T 3ez1_A 200 GLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRA--FVFASTSKIT-FAGAGLGFVASSEDNIRWLSK 276 (423)
T ss_dssp TCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSE--EEEEESTTTS-CSSSSCEEEEECHHHHHHHHH
T ss_pred HHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeE--EEEeCchhhc-cCCcceEEEEeCHHHHHHHHH
Confidence 468 999999999999873 322 11122211 11211 3466999975 333 3332 223221 12
Q ss_pred cceeeccCCCHHHHHHHHHHHHH
Q psy4800 63 YRVFNTWMGDPGKVLLLKGIIDT 85 (119)
Q Consensus 63 ~~~~~T~~~~p~~~a~a~a~l~~ 85 (119)
.....++..++++..++.+.|+.
T Consensus 277 ~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 277 YLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp HHHHSCSCCCHHHHHHHHHHHHH
T ss_pred HHhhhccCCCHHHHHHHHHHHHh
Confidence 22345667889988888887775
No 179
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.20 E-value=1.3e-06 Score=71.34 Aligned_cols=106 Identities=8% Similarity=-0.039 Sum_probs=67.4
Q ss_pred hhhhhCCEEEEccccccccCCCcchhhhhcCCC--CCCCEE-----EEchhhcc---Cccccc-cccc----ccccccee
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLE--ESPDIV-----TFSKKMQL---GGYFLK-PEFV----PQQAYRVF 66 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~--~~pDi~-----t~gK~lg~---gG~~~~-~~~~----~~~~~~~~ 66 (119)
+|++++ +|+||+|.+.-..+..+. ....+. ..+|++ +++|+|++ ||++.. +.+. +.....+.
T Consensus 321 la~~~~--livDEAH~~~~~f~~~~~-~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~ 397 (715)
T 3n75_A 321 TLDVKS--IHFDSAWVPYTNFSPIYE-GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHT 397 (715)
T ss_dssp HCCCSE--EEEECTTCTTGGGSGGGT-TSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTS
T ss_pred HhCcCc--EEEccccccccccCCccc-cccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhc
Confidence 566664 799999863212232211 011111 126743 78999962 455543 2221 22234455
Q ss_pred eccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhhhh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGLGQ 111 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l~~ 111 (119)
+| +.+++.+++..++++++++ +++.+++.++.++|++.|+++..
T Consensus 398 ST-Spsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 398 TT-SPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp CS-SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 66 8899999999999999873 46889999999999999998753
No 180
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.17 E-value=1.4e-06 Score=63.54 Aligned_cols=101 Identities=14% Similarity=0.023 Sum_probs=52.7
Q ss_pred ChhhhhCCEEEEccccccc--cCCCcchhhhhcCCCCCCCEEE--Echhhc-cC-cccc-ccccccccccc---eeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGG--GPCGKFWCHEHFDLEESPDIVT--FSKKMQ-LG-GYFL-KPEFVPQQAYR---VFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~--Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg-~g-G~~~-~~~~~~~~~~~---~~~T~~ 70 (119)
++|++||+++|+||+|.+| |+++... ...++...+|+++ ..|..+ .| |++. .+.+.+..... ..+++.
T Consensus 171 ~~~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T 1svv_A 171 ASCKEHGLYLFLDGARLASALSSPVNDL--TLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMA 248 (359)
T ss_dssp HHHHHHTCEEEEECTTHHHHHTSTTCCC--CHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred HHHHHhCCEEEEEccchhhhhcCCCcch--hhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence 4799999999999999665 6555321 1111101278875 467532 11 2322 33333221111 223333
Q ss_pred CCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHH
Q psy4800 71 GDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVR 106 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L 106 (119)
.++...++..+ .+++ ++..++++++.+++++.|
T Consensus 249 ~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~l~~~L 284 (359)
T 1svv_A 249 KGWLLGIQFEV---LMKDNLFFELGAHSNKMAAILKAGL 284 (359)
T ss_dssp TTHHHHHHHHH---HTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHH---HHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 23333332222 3433 246677888888888888
No 181
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=98.16 E-value=3.2e-06 Score=69.09 Aligned_cols=106 Identities=12% Similarity=-0.048 Sum_probs=63.3
Q ss_pred ChhhhhCCEEEEcccccc---ccCCCcc---hhhhhcCCCCCCC-EE--EEchhhc--c-Ccccc-ccc-------ccc-
Q psy4800 1 MYEKYHGSALLIDEVQTG---GGPCGKF---WCHEHFDLEESPD-IV--TFSKKMQ--L-GGYFL-KPE-------FVP- 59 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG---~Gr~G~~---~~~~~~g~~~~pD-i~--t~gK~lg--~-gG~~~-~~~-------~~~- 59 (119)
++|++||+++++||+|.+ |+..+.+ ...+..+.+ .|. ++ +++|+++ . ||++. .+. +.+
T Consensus 304 ~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D-~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~ 382 (730)
T 1c4k_A 304 KRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPE-DPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDH 382 (730)
T ss_dssp HHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTT-SCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCH
T ss_pred HHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCC-CCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCH
Confidence 479999999999999853 2211110 001112321 121 55 7899986 2 34441 111 111
Q ss_pred ----ccccceeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHh
Q psy4800 60 ----QQAYRVFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 60 ----~~~~~~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~ 108 (119)
.....+.+| +.++..+++..++++.+.+ +++.+++.++.+++++.|++
T Consensus 383 ~~~~~~~~~~~st-sp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~ 437 (730)
T 1c4k_A 383 KHFNNSFNLFMST-SPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIK 437 (730)
T ss_dssp HHHHHHHHHHSCS-SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 011122334 6778888888888888765 35778889999999999987
No 182
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.15 E-value=1e-06 Score=66.74 Aligned_cols=106 Identities=10% Similarity=0.001 Sum_probs=58.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhh---hhcCCCCCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCH---EHFDLEESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~---~~~g~~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||+|..+ ..+..+.. ...+.. +++.+|+|.+..| |++.. ..+.+. .......++..+
T Consensus 233 ~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~--i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~ 309 (444)
T 3if2_A 233 EIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNT--ILCFSLSKIGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPT 309 (444)
T ss_dssp HHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTE--EEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHCCCEEEEECCCCCc-ccccccccccccCCCCE--EEEechhhccCCCCceEEEEECHHHHHHHHHHHHhccCCCC
Confidence 3799999999999998532 11111100 011222 4466999975222 44433 223321 122234566778
Q ss_pred HHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHN-----ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~-----~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++++.+.++..+- ....++++++-+.+++.|++.
T Consensus 310 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (444)
T 3if2_A 310 RFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQA 351 (444)
T ss_dssp CHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888777764321 123445556666666666654
No 183
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.14 E-value=1e-05 Score=59.44 Aligned_cols=101 Identities=11% Similarity=0.067 Sum_probs=60.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc--Ccccc-ccc--ccccccc----ceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL--GGYFL-KPE--FVPQQAY----RVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~--gG~~~-~~~--~~~~~~~----~~~~T~ 69 (119)
++|++||++ |+||+|. +|.... ....+ . +|++ +++|.+|. .|++. .+. +...... ......
T Consensus 162 ~l~~~~~~~-i~D~a~~-~g~~~~--~~~~~--~--~di~~~s~sK~~g~~g~G~~~~~~~~~l~~~~~~~~~~~~~~~~ 233 (382)
T 4eb5_A 162 EVLAGKAAL-HIDATAS-VGQIEV--DVEKI--G--ADMLTISSNDIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSG 233 (382)
T ss_dssp HHHTTSSEE-EEECTTT-BTTBCC--CHHHH--T--CSEEEEETGGGTCCSSCEEEEEETTCCCCCSSCSSCTGGGTSCS
T ss_pred HHHHHCCCE-EEEcchh-cCCccc--Ccccc--C--CCEEEeehHHhcCCCceEEEEEccccccCceecCCCccccccCC
Confidence 479999999 9999976 543321 11222 2 7887 45698752 24433 222 2211100 112233
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++..+++..++++.+++ ++..++++++.+++.+.|+++
T Consensus 234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 275 (382)
T 4eb5_A 234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKI 275 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 4567777777888888765 345667788888888888764
No 184
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.13 E-value=4.9e-06 Score=62.93 Aligned_cols=99 Identities=10% Similarity=0.011 Sum_probs=58.4
Q ss_pred Chhhh-hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Ccccccc-cccc-c-cccceee-c
Q psy4800 1 MYEKY-HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKP-EFVP-Q-QAYRVFN-T 68 (119)
Q Consensus 1 ~l~~~-~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~-~~~~-~-~~~~~~~-T 68 (119)
++|++ ||+++|+||+|..+.. .... + ++ .|++ +++|.+++ +|++..+ .+.. . .+..... +
T Consensus 171 ~la~~~~~~~li~De~~~~~~~-~~~~--~-~~----~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g 242 (404)
T 1e5e_A 171 KDAHSQEGVLVIADNTFCSPMI-TNPV--D-FG----VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITG 242 (404)
T ss_dssp HHHHTSTTCEEEEECTTTCTTT-CCGG--G-GT----CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred HHHHhhcCCEEEEECCCchhhh-CCcc--c-cC----CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCC
Confidence 47999 9999999999975422 2221 1 33 5666 79999862 3555432 2222 1 1111222 3
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
...+|+.+.++.++++.+. ...++..++.+.+.+.|++.
T Consensus 243 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 281 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTLN--IRMKAESENAMKVAEYLKSH 281 (404)
T ss_dssp CCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHhC
Confidence 3678998888888776542 23444555666666666543
No 185
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.13 E-value=1.6e-06 Score=65.50 Aligned_cols=105 Identities=10% Similarity=-0.100 Sum_probs=56.1
Q ss_pred hh-hhhCCEEEEcccccc--ccCCCc----chhhh----hcCCCCCCCEEEEchhhccC---cccccc-ccccc-cccce
Q psy4800 2 YE-KYHGSALLIDEVQTG--GGPCGK----FWCHE----HFDLEESPDIVTFSKKMQLG---GYFLKP-EFVPQ-QAYRV 65 (119)
Q Consensus 2 l~-~~~~~lli~DEv~tG--~Gr~G~----~~~~~----~~g~~~~pDi~t~gK~lg~g---G~~~~~-~~~~~-~~~~~ 65 (119)
+| ++||+++|+||++.. |+..+. ..... ..+.. +++.+|+|.++.| |++..+ .+.+. .....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~ 286 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRF--WAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAG 286 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSE--EEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcE--EEEechhhccCcCccEEEEEcCHHHHHHHHHHhh
Confidence 67 999999999999987 444332 11111 12222 5566999985222 444432 23221 11223
Q ss_pred eeccCCCHHHHHHHHHHHHHH---hh--hcHHHHHHHHHHHHHHHHHh
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTI---HN--ENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i---~~--~~~~~~~~~~g~~l~~~L~~ 108 (119)
..++..++++..++.+.++.. .+ .+..+.++++-+.+.+.|++
T Consensus 287 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 287 IRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp HHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888887777666531 11 12233344444455555544
No 186
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.12 E-value=1.7e-06 Score=64.63 Aligned_cols=106 Identities=9% Similarity=-0.045 Sum_probs=57.3
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhh---hhcCCCCCCCEEEEchhhccC---ccccc-cccccc-cccceeeccCCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCH---EHFDLEESPDIVTFSKKMQLG---GYFLK-PEFVPQ-QAYRVFNTWMGD 72 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~---~~~g~~~~pDi~t~gK~lg~g---G~~~~-~~~~~~-~~~~~~~T~~~~ 72 (119)
++|++||+++|+||++..+ ..+..+.. ...+.. ..+.+|+|.+..| |++.. ..+.+. .......+++.+
T Consensus 207 ~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~--i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 283 (417)
T 3g7q_A 207 RLANQHNIPLVIDNAYGVP-FPGIIFSEARPLWNPNI--ILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGIISLAPG 283 (417)
T ss_dssp HHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTE--EEEEESGGGTCTTSCCEEEECCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHcCCEEEEeCCCccc-cccccccccccCCCCCE--EEEEechhccCCCcceEEEEeCHHHHHHHHHhhcceeeCCC
Confidence 4799999999999998532 11111000 001111 2356999954222 44333 223321 122334566778
Q ss_pred HHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHHHhh
Q psy4800 73 PGKVLLLKGIIDTIHN-----ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 73 p~~~a~a~a~l~~i~~-----~~~~~~~~~~g~~l~~~L~~l 109 (119)
+++++++.+.++...- +...++++++.+++.+.|++.
T Consensus 284 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (417)
T 3g7q_A 284 GMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRY 325 (417)
T ss_dssp SHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888777763221 124445566666777777664
No 187
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=98.12 E-value=1e-05 Score=62.90 Aligned_cols=46 Identities=20% Similarity=0.131 Sum_probs=32.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ 47 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg 47 (119)
++|++||+++++|+++.|+......+.+...++. .+|++++ .|.++
T Consensus 283 ~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~-~aD~v~~s~hK~l~ 330 (515)
T 2jis_A 283 DVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ-RADSVAWNPHKLLA 330 (515)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG-GCSEEEECTTSTTC
T ss_pred HHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc-cCCEEEECcccccC
Confidence 4799999999999999876444433333333541 3899987 89984
No 188
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.11 E-value=1.2e-05 Score=61.49 Aligned_cols=102 Identities=12% Similarity=-0.008 Sum_probs=63.6
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhh--c-cC-cc-ccccccccc----cccc-----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKM--Q-LG-GY-FLKPEFVPQ----QAYR----- 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~l--g-~g-G~-~~~~~~~~~----~~~~----- 64 (119)
++|++||+++|+|++|+ .|.... ..+..+ +|+++ +.|.+ | .| |+ +..+.+... ....
T Consensus 238 ~la~~~g~~vi~D~a~~-~g~~~~--~~~~~~----~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~ 310 (465)
T 3e9k_A 238 KAGQAKGCYVGFDLAHA-VGNVEL--YLHDWG----VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHEL 310 (465)
T ss_dssp HHHHHTTCEEEEECTTT-TTTSCC--CHHHHT----CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCH
T ss_pred HHHHHcCCEEEEEhhhh-cCCcCC--chhhcC----CCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCC
Confidence 47999999999999975 333221 122233 67774 55998 3 11 22 223332211 0000
Q ss_pred ----------e-------eeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 ----------V-------FNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ----------~-------~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
. +..-..|++++++..++++.+++ ++++++.+++.+++.+.|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 311 STRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 00115678899999999999875 457778889999999999875
No 189
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.10 E-value=9.9e-06 Score=63.55 Aligned_cols=51 Identities=18% Similarity=-0.031 Sum_probs=33.1
Q ss_pred hhh-hhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC---ccccc
Q psy4800 2 YEK-YHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLK 54 (119)
Q Consensus 2 l~~-~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~ 54 (119)
+|+ +||+++|+||++.+|...+........+.. +.+.+|+|.+| .| |++..
T Consensus 272 la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--i~~~S~SK~~g~~G~RiG~l~~ 327 (533)
T 3f6t_A 272 AVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNT--MLVYSYSKLFGCTGWRLGVIAL 327 (533)
T ss_dssp HHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGE--EEEEESHHHHTCGGGCEEEEEE
T ss_pred HHHhCCCCEEEEcCCccccccCccCHhhcCCCCE--EEEecCcccCCCcccceEEEEE
Confidence 677 699999999999877543332222212222 55669999997 45 66543
No 190
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.09 E-value=2.1e-06 Score=62.36 Aligned_cols=104 Identities=18% Similarity=0.116 Sum_probs=57.9
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC---cccccc-ccccccccceeeccCCCHHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLKP-EFVPQQAYRVFNTWMGDPGK 75 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~~-~~~~~~~~~~~~T~~~~p~~ 75 (119)
++|+++++ +|+||++.+|+..+... ....+.. ..+.+++|.+| .| |++..+ .+...... ...++..++++
T Consensus 159 ~l~~~~~~-~ivDea~~~~~~~~~~~-~~~~~~~--i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~-~~~~~~~~~~~ 233 (337)
T 3p1t_A 159 QLRQRAGK-LLIDETYVDYSSFRARG-LAYGENE--LVFRSFSKSYGLAGLRLGALFGPSELIAAMKR-KQWFCNVGTLD 233 (337)
T ss_dssp HHHHHCSE-EEEECTTGGGSSCSSSC-CCCBTTE--EEEEESSSTTCCTTTCCEEEECCHHHHHHHHT-TSCTTCSCHHH
T ss_pred HHHHhCCc-EEEECCChhhccccccc-cccCCCE--EEEeeCchhccCcchheEEEEeCHHHHHHHHh-hcCCCCCCHHH
Confidence 37888986 56699998775444321 0111111 22338999996 34 555432 23221111 12345678888
Q ss_pred HHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 76 VLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 76 ~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+++.++|+.... ++..+++.++.+++.+.|+++
T Consensus 234 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 234 LHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8777777764321 234455666667777777765
No 191
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=98.08 E-value=9.8e-06 Score=59.27 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=60.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc--Ccccc-cccc--cccc----ccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL--GGYFL-KPEF--VPQQ----AYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~--gG~~~-~~~~--~~~~----~~~~~~T~ 69 (119)
++|++||+ +|+||+|+ +|... ...+..+ +|++ +++|.+|. .|+.. .+.. .... ......+.
T Consensus 162 ~l~~~~~~-li~D~a~~-~~~~~--~~~~~~~----~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (382)
T 4hvk_A 162 EVLAGKAA-LHIDATAS-VGQIE--VDVEKIG----ADMLTISSNDIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSG 233 (382)
T ss_dssp HHHSSSSE-EEEECTTT-BTTBC--CCHHHHT----CSEEEEESGGGTSCTTCEEEEEETTCCCCCSSCSSCTGGGTSCS
T ss_pred HHHHHcCE-EEEEhHHh-cCCCC--CCchhcC----CCEEEEeHHHhcCCCceEEEEEcCccCcCcccccCCCcCccccC
Confidence 47999999 99999975 33221 1122233 6777 55597752 23333 2221 1110 00111233
Q ss_pred CCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHN--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
..++.++++..++++.+++ ++..++.+++.+++.+.|+++
T Consensus 234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 275 (382)
T 4hvk_A 234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKI 275 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 5678888888888887654 456677888888888888754
No 192
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=98.06 E-value=1.9e-05 Score=57.75 Aligned_cols=100 Identities=8% Similarity=0.110 Sum_probs=58.7
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC-ccccc-cccccc----cccc-------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG-GYFLK-PEFVPQ----QAYR------- 64 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g-G~~~~-~~~~~~----~~~~------- 64 (119)
+|+++||+++|+||+|..+.+. ..+. ..|++ +++|.+| .| |++.. +.+... .+..
T Consensus 160 ~i~~~~~~~li~D~a~~~~~~~--------~~~~-~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (360)
T 1w23_A 160 NFPEINHAPLIADMSSDILSRP--------LKVN-QFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHI 230 (360)
T ss_dssp SCCCCCSSCEEEECTTTTTSSC--------CCGG-GCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHH
T ss_pred cccccCCceEEEechhhcCCCC--------cCcc-cCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhh
Confidence 3567899999999998633221 1111 12777 4569997 33 55443 222221 1110
Q ss_pred -eeecc-CCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 65 -VFNTW-MGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 -~~~T~-~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
..+++ ..++.++.++.++++.+.+. ++.++.+++.+++.+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 231 KSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES 281 (360)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 11222 34666777778888887643 45667778888888888765
No 193
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=98.05 E-value=2.7e-06 Score=65.74 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=56.5
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhcc-----Cccccc-cccccccc-c-ceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQL-----GGYFLK-PEFVPQQA-Y-RVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg~-----gG~~~~-~~~~~~~~-~-~~~~T~~ 70 (119)
++|++||+++|+||+|+.. ... ...... +|+++ ++|.+++ +|++.. +.+..... . ..+++ .
T Consensus 224 ~la~~~g~~livD~a~~~~-~~~-----~~~~~g--~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~-~ 294 (445)
T 1qgn_A 224 KLCHEKGALVCIDGTFATP-LNQ-----KALALG--ADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGG-A 294 (445)
T ss_dssp HHHHHTTCEEEEECTTTCT-TTC-----CTTTTT--CSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCC-C
T ss_pred HHHHHcCCEEEEECCCccc-ccC-----CccccC--CEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCC-C
Confidence 4799999999999998521 111 122333 89885 8999962 344443 22322111 0 11122 3
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 71 GDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+|..+..++..++.+. ...++..++.+++.+.|++.
T Consensus 295 ~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~ 331 (445)
T 1qgn_A 295 LNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILEAH 331 (445)
T ss_dssp CCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 47887777766666553 23344555667777777664
No 194
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.04 E-value=3.9e-06 Score=65.24 Aligned_cols=109 Identities=20% Similarity=0.182 Sum_probs=61.3
Q ss_pred ChhhhhCCEEEEccccccccCCC--cchh----hhhcCC-CCCCC-EE--EEchhh-c----cCccccc----ccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG--KFWC----HEHFDL-EESPD-IV--TFSKKM-Q----LGGYFLK----PEFVPQQ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G--~~~~----~~~~g~-~~~pD-i~--t~gK~l-g----~gG~~~~----~~~~~~~ 61 (119)
++|++||+++|+||++..+...+ .... ...++. ...++ ++ +|+|++ | -+|++.. ..+.+..
T Consensus 264 ~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 343 (500)
T 3tcm_A 264 KFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQI 343 (500)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHH
T ss_pred HHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHH
Confidence 36999999999999987642211 1111 122332 21123 33 899998 3 2355542 2332211
Q ss_pred ccceeeccCCCHHHHHHHHHHHH-----------HHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 AYRVFNTWMGDPGKVLLLKGIID-----------TIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~~~~~~T~~~~p~~~a~a~a~l~-----------~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
......++..++++.+++.++++ +.++ ++++++++++.+++.+.|+++
T Consensus 344 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 344 YKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111233567777777777664 3332 356677888888888888775
No 195
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.02 E-value=1.2e-05 Score=59.12 Aligned_cols=102 Identities=16% Similarity=0.064 Sum_probs=62.2
Q ss_pred Chhhhh--CCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhc--cC-ccccc-ccccc-cc----------
Q psy4800 1 MYEKYH--GSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ--LG-GYFLK-PEFVP-QQ---------- 61 (119)
Q Consensus 1 ~l~~~~--~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg--~g-G~~~~-~~~~~-~~---------- 61 (119)
++|++| |+++|+||+|+ +|... ...+.+ . +|+++ ++|+++ .| |++.. +.+.. ..
T Consensus 161 ~~~~~~~~~~~li~D~a~~-~~~~~--~~~~~~--~--~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~ 233 (385)
T 2bkw_A 161 QAIKQTSPETFFVVDAVCS-IGCEE--FEFDEW--G--VDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHG 233 (385)
T ss_dssp HHHHHHCTTSEEEEECTTT-TTTSC--CCTTTT--T--CSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSC
T ss_pred HHHHhhCCCCEEEEECccc-cCCcc--cccccc--C--ceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCc
Confidence 479999 99999999985 43321 111212 2 78874 579874 22 44432 22221 10
Q ss_pred ---------c---cce---ee-ccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHH-Hhh
Q psy4800 62 ---------A---YRV---FN-TWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVR-LGL 109 (119)
Q Consensus 62 ---------~---~~~---~~-T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L-~~l 109 (119)
+ .+. .. .+..|+.+++++.++++.+.+. +..++.+++.+++.+.| +++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 301 (385)
T 2bkw_A 234 YFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL 301 (385)
T ss_dssp STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 000 01 1357788888888999987643 45677888889999988 664
No 196
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=98.02 E-value=1.6e-05 Score=57.88 Aligned_cols=100 Identities=11% Similarity=0.127 Sum_probs=59.9
Q ss_pred Chhhhh-CCEEEEccccccccCCCcchhhhhcCCCCCCCEEE--Echhhc-c-C-ccccc-cccccc----c-----ccc
Q psy4800 1 MYEKYH-GSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVT--FSKKMQ-L-G-GYFLK-PEFVPQ----Q-----AYR 64 (119)
Q Consensus 1 ~l~~~~-~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t--~gK~lg-~-g-G~~~~-~~~~~~----~-----~~~ 64 (119)
++|++| |+++|+||+|. +|... ..+. ..|+++ ++|.++ . | |++.. +.+... . ..+
T Consensus 154 ~la~~~p~~~li~D~a~~-~~~~~-------~~~~-~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~ 224 (362)
T 3ffr_A 154 TFRDKNKDALIFVDAVSS-LPYPK-------FDWT-KIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGT 224 (362)
T ss_dssp TSGGGSTTSEEEEECTTT-TTSSC-------CCTT-SCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHhCCCCEEEEecccc-cCCcc-------cChh-HCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcc
Confidence 589999 99999999975 32211 1221 178874 559995 1 2 33332 222110 0 000
Q ss_pred e------------ee-ccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 65 V------------FN-TWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~------------~~-T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
. +. .+..++.+..+..++++.+.++ +..++.+++.+++.+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 285 (362)
T 3ffr_A 225 YHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESS 285 (362)
T ss_dssp TTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 11 3356777777788888877653 45667778888888888765
No 197
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=97.99 E-value=1.2e-06 Score=64.00 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=53.3
Q ss_pred ChhhhhCCEEEEcccccccc--CCCcchhhhhcCCCCCCCEE--EEchhhc-cC-cccc-ccccccccccc--eeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGG--PCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG-GYFL-KPEFVPQQAYR--VFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~G--r~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g-G~~~-~~~~~~~~~~~--~~~T~~~ 71 (119)
++|++||+++|+||++..+. ..|.. ....++...+|++ +++|+.+ .| |++. .+.+.+..... ..++...
T Consensus 167 ~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 244 (356)
T 1v72_A 167 DVCKSSSLGLHMDGSRFANALVSLGCS--PAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSS 244 (356)
T ss_dssp HHHHHTTCEEEEEETTHHHHHHHHTCC--TTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHHHHHHTTCCCS
T ss_pred HHHHHcCCeEEEEchhhHhHhccCCCC--HHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHHHhhccCchhh
Confidence 47999999999999986321 11111 1111111126766 5789732 34 4654 33333211100 1111111
Q ss_pred CHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 72 DPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
. +..++.++++.++++ +..++++++.+++++.|+++
T Consensus 245 ~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (356)
T 1v72_A 245 K--MRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL 283 (356)
T ss_dssp S--THHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred h--HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 1 122334456666543 34566778888888888653
No 198
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=97.98 E-value=9.8e-06 Score=60.38 Aligned_cols=107 Identities=18% Similarity=0.151 Sum_probs=55.4
Q ss_pred ChhhhhCCEEEEccccccccCCCc---chhhhhc-CCCCCCCE---EEEchhhc-cC---ccccc---c-c----ccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK---FWCHEHF-DLEESPDI---VTFSKKMQ-LG---GYFLK---P-E----FVPQQ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~---~~~~~~~-g~~~~pDi---~t~gK~lg-~g---G~~~~---~-~----~~~~~ 61 (119)
++|++||+++|+||++.+++..+. .+....+ +.. +++ .+|+|.+| .| |+... + . +....
T Consensus 202 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~ 279 (401)
T 7aat_A 202 SVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG--IDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQL 279 (401)
T ss_dssp HHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT--CCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC--CcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHH
Confidence 479999999999999987755442 2222211 222 333 48999986 34 55321 1 1 22211
Q ss_pred cccee-eccCCCHHHHHHHHHHHHH-------Hh-hhcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 AYRVF-NTWMGDPGKVLLLKGIIDT-------IH-NENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ~~~~~-~T~~~~p~~~a~a~a~l~~-------i~-~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..... .+...+..+.+++...++- .+ -++.+++++++-+++.+.|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 2223333444444333321 11 1234556777777777777765
No 199
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=97.97 E-value=3e-05 Score=60.03 Aligned_cols=108 Identities=19% Similarity=0.091 Sum_probs=58.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc---cCcccc-cc-cccc----ccccceee--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ---LGGYFL-KP-EFVP----QQAYRVFN-- 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg---~gG~~~-~~-~~~~----~~~~~~~~-- 67 (119)
++|++||+++++|+++.|+......+.....++. .+|+++++ |.++ ..|++. .+ .+.. ..+.+..+
T Consensus 269 ~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~-~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~ 347 (504)
T 2okj_A 269 DICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE-RANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPD 347 (504)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG-GCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSC
T ss_pred HHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc-cCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCc
Confidence 4799999999999998865332222112223442 38999886 9885 123333 32 2211 11111110
Q ss_pred c----------------cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 T----------------WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 T----------------~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
+ ...+++.+.++++++..-.-++..++..++.++|.+.|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 405 (504)
T 2okj_A 348 KQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR 405 (504)
T ss_dssp CSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 01235555555555432111235566778888888888764
No 200
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=97.96 E-value=1.1e-06 Score=65.84 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=56.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCccccc-ccccccccc-ceeeccCCCHH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLK-PEFVPQQAY-RVFNTWMGDPG 74 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~-~~~~~~~~~-~~~~T~~~~p~ 74 (119)
++|++||+++|+||++.-+ ..|........... +|++ +++|.++ .+|++.. +.+.+.... ....+...+|+
T Consensus 166 ~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~--~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (374)
T 2aeu_A 166 NTAKNKEAIVFVDDASGAR-VRLLFNQPPALKLG--ADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPP 242 (374)
T ss_dssp HHHHHHTCCEEEECTTHHH-HHHHTTCCCHHHHT--CSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHH
T ss_pred HHHHHcCCEEEEECCcccc-cccccccCCccccC--CcEEEecCcccccCcceEEEEECHHHHHHHHHhhccccCCCCHH
Confidence 4799999999999986422 11111000011123 7887 6999984 3466543 233221111 11112256899
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHH----HHHHHh
Q psy4800 75 KVLLLKGIIDTIHNENLLDRVQKTGDIL----LNVRLG 108 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~~~~~~~~~~g~~l----~~~L~~ 108 (119)
.++++.++|+.+.. +..++..++.+.+ ++.|++
T Consensus 243 ~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 279 (374)
T 2aeu_A 243 LLAGIYRALKNFNL-ERIRKAFERAKNFDLSKIEKLNK 279 (374)
T ss_dssp HHHHHHHHHHHCCH-HHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988643 2334444445455 455544
No 201
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.95 E-value=1.2e-05 Score=61.13 Aligned_cols=106 Identities=14% Similarity=0.091 Sum_probs=55.9
Q ss_pred ChhhhhCCEEEEcccccc----------ccCCCc---chhhhhcCCCCCCCE--EEEchhhc-c-Cccccc-cc-ccc--
Q psy4800 1 MYEKYHGSALLIDEVQTG----------GGPCGK---FWCHEHFDLEESPDI--VTFSKKMQ-L-GGYFLK-PE-FVP-- 59 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG----------~Gr~G~---~~~~~~~g~~~~pDi--~t~gK~lg-~-gG~~~~-~~-~~~-- 59 (119)
++|++||++||+|++|.. .+..|. .+..+.+. . +|+ .+++|+++ . ||++.. +. +++
T Consensus 211 ~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~-~--~d~~~~s~sK~~g~~~Gg~~~~~~~~~~~~~ 287 (467)
T 2oqx_A 211 SIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYK-Y--ADMLAMSAKKDAMVPMGGLLCMKDDSFFDVY 287 (467)
T ss_dssp HHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGG-G--CSEEEEESSSTTCCSSCEEEEECSGGGHHHH
T ss_pred HHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhc-c--CCeEEEecccccCCCCceEEEecChhHHHHH
Confidence 489999999999987643 133333 22111111 1 454 58999986 3 666553 23 221
Q ss_pred -c-cc----cceeeccCCCHHHHHHHHH-HHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 60 -Q-QA----YRVFNTWMGDPGKVLLLKG-IIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 60 -~-~~----~~~~~T~~~~p~~~a~a~a-~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
. .+ .....++++.+....++++ .++...+++..++.+++.+++++.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 288 TECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp HHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 1 11 1112233443333332332 2232222345566778899999999876
No 202
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=97.93 E-value=1.3e-05 Score=65.73 Aligned_cols=109 Identities=11% Similarity=0.002 Sum_probs=65.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcch--hhhhcC--CC-CCCCE-E--EEchhhc--c-Ccccc-ccc--ccc-----cc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFW--CHEHFD--LE-ESPDI-V--TFSKKMQ--L-GGYFL-KPE--FVP-----QQ 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~--~~~~~g--~~-~~pDi-~--t~gK~lg--~-gG~~~-~~~--~~~-----~~ 61 (119)
++|++||+++++||+|.+.-..+..+ .....+ .+ ..+.+ + +++|+++ . ||++. .+. ..+ ..
T Consensus 335 ~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~ 414 (755)
T 2vyc_A 335 DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA 414 (755)
T ss_dssp HHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHH
T ss_pred HHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHH
Confidence 47999999999999986321122111 011122 11 01111 3 7899985 2 44443 222 111 11
Q ss_pred ccceeeccCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhhh
Q psy4800 62 AYRVFNTWMGDPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 62 ~~~~~~T~~~~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l~ 110 (119)
...+.+| +.+...+++..++++.+.++ ++.+++.++.++++++|+++.
T Consensus 415 ~~~~~s~-sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~ 465 (755)
T 2vyc_A 415 YMMHATT-SPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_dssp HHHTSCS-SCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-CHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1122233 67788888888899988653 578889999999999998863
No 203
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=97.91 E-value=4.1e-05 Score=56.26 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=59.2
Q ss_pred hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC-ccccc-ccccccc-c--cce----------ee
Q psy4800 6 HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG-GYFLK-PEFVPQQ-A--YRV----------FN 67 (119)
Q Consensus 6 ~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g-G~~~~-~~~~~~~-~--~~~----------~~ 67 (119)
||+++|+||+|. +|.. . .++.. .|++ +++|.+| .| |++.. +.+.+.. + ..+ ..
T Consensus 166 ~~~~vivD~a~~-~~~~--~-----~~~~~-~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 236 (362)
T 2c0r_A 166 GSVPLIGDMSSD-ILSR--P-----FDLNQ-FGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSL 236 (362)
T ss_dssp TTSCEEEECTTT-TTSS--C-----CCGGG-CSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTC
T ss_pred CCCEEEEEChhh-ccCC--c-----cchhH-CcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCc
Confidence 799999999975 3321 1 12221 3765 7899997 34 66543 3332211 1 011 12
Q ss_pred ccCCCHHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 TWMGDPGKVLLLKGIIDTIHN----ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 T~~~~p~~~a~a~a~l~~i~~----~~~~~~~~~~g~~l~~~L~~l 109 (119)
.++.++.+.+++.++|+.+.+ ++..++.+++.+++++.|+++
T Consensus 237 ~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 282 (362)
T 2c0r_A 237 YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQS 282 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 335677888888999998765 345667788888888888765
No 204
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=97.90 E-value=2.1e-05 Score=60.45 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=56.5
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhcc-----Ccccc--ccc-cc--------------
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQL-----GGYFL--KPE-FV-------------- 58 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg~-----gG~~~--~~~-~~-------------- 58 (119)
++|++||+++|+||++. . |.......+|.+ ..+.+++|.+++ ||+++ .+. +.
T Consensus 191 ~la~~~g~~livD~a~~-~---~~~~~~~~~g~d--iv~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~ 264 (430)
T 3ri6_A 191 KVVHAKGIPLVVDTTMT-P---PYLLEAKRLGVD--IEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGP 264 (430)
T ss_dssp HHHHTTTCCEEEECTTS-C---TTTCCGGGGTCS--EEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGG
T ss_pred HHHHHcCCEEEEECCCc-c---cccCChHHcCCE--EEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhch
Confidence 47999999999999975 2 222222234533 334478899852 45554 211 10
Q ss_pred ----cccccceee--ccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 59 ----PQQAYRVFN--TWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 59 ----~~~~~~~~~--T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
......... ....+|..+..++..++.+. ...++..++.+++.+.|++
T Consensus 265 ~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~--~r~~~~~~na~~la~~L~~ 318 (430)
T 3ri6_A 265 MAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMA--LRIERSCQNAQELAHWLLS 318 (430)
T ss_dssp GHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHhC
Confidence 000000111 11357888777777777664 2445667777777777754
No 205
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.87 E-value=5.7e-06 Score=62.40 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=57.8
Q ss_pred Chhhhh----CCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-C----ccccc--ccccccc-cccee
Q psy4800 1 MYEKYH----GSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-G----GYFLK--PEFVPQQ-AYRVF 66 (119)
Q Consensus 1 ~l~~~~----~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-g----G~~~~--~~~~~~~-~~~~~ 66 (119)
++|++| |+++|+||+|+.+.. .... .++ +|++ +++|.+|. | |++.. ..+.+.. .....
T Consensus 162 ~la~~~~~~~~~~livD~a~~~~~~-~~~~---~~~----~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 162 DLIKKHAAGQDVILVVDNTFLSPYI-SNPL---NFG----ADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp HHHHHHTTTTTCEEEEECTTTHHHH-CCGG---GGT----CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEeCCcccccc-CCHH---HcC----CeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 479999 999999999975433 2221 123 7877 89999972 3 66553 2332211 11111
Q ss_pred eccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 67 NTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.....+|..++++.++++.+. ...++..++.+.+.+.|++.
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 274 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLH--LRVRQAALSANKIAEFLAAD 274 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTSC
T ss_pred cCCCCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHHhC
Confidence 112456888777777776543 23445556666666666553
No 206
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=97.87 E-value=3.2e-05 Score=59.11 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=57.5
Q ss_pred Chhhh--hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Cccccccc-cccc-----cccce
Q psy4800 1 MYEKY--HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKPE-FVPQ-----QAYRV 65 (119)
Q Consensus 1 ~l~~~--~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~~-~~~~-----~~~~~ 65 (119)
++|++ ||+++|+||++. .+..+. +..... .|++ +++|.+|+ ||+++.+. +.+. .....
T Consensus 187 ~la~~~~~~~~livD~a~~-~~~~~~----~p~~~g--~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~ 259 (409)
T 3jzl_A 187 VFVKNINPEVIVFVDNCYG-EFVEYQ----EPPEVG--ADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGI 259 (409)
T ss_dssp HHHHHHCTTCEEEEECTTC-TTTSSC----CSGGGT--CSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTT
T ss_pred HHHHhhCCCCEEEEeCCcc-cccccC----CccccC--CeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccc
Confidence 47899 999999999964 222111 111112 6877 89999962 46665432 2221 11222
Q ss_pred eeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhh
Q psy4800 66 FNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 66 ~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
..+.+..+..+.+++..++.+ +...++..++.+++.+.|+++.
T Consensus 260 g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g 302 (409)
T 3jzl_A 260 GREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEFG 302 (409)
T ss_dssp GGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhCC
Confidence 223233332233344444333 3567778899999999998863
No 207
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=97.83 E-value=1.9e-05 Score=61.20 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=58.8
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCcccccc-ccc---------------c
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKP-EFV---------------P 59 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~-~~~---------------~ 59 (119)
++|++||+++|+||+|. |+-..|.. . ..+. .+|++ +++|+|+ -||++..+ .+. .
T Consensus 215 ~ia~~~g~~livD~ah~~g~~~~~~~---~-~p~~-~~div~~s~~K~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~ 289 (483)
T 1rv3_A 215 KIADENGAYLMADMAHISGLVVAGVV---P-SPFE-HCHVVTTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLES 289 (483)
T ss_dssp HHHHHTTCEEEEECTTTHHHHHHTSS---C-CGGG-TCSEEEEESSGGGCCCSCEEEEEECSBCC-------CCBCCHHH
T ss_pred HHHHHcCCEEEEEccchhcccccCCC---C-CCCC-CCcEEEecCcccCCCCCceEEEEcchhhhhccccCcchhhHHHH
Confidence 47999999999999985 43111110 0 0000 26888 4569984 35776543 211 0
Q ss_pred c-cc-cceeeccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 60 Q-QA-YRVFNTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 60 ~-~~-~~~~~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
. .. .+.+..-+.+....++..++++.+.+ ++..+++.++.+++.+.|+++
T Consensus 290 ~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (483)
T 1rv3_A 290 LINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL 344 (483)
T ss_dssp HHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 00 00011112334455555667877654 345677888899999998875
No 208
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.82 E-value=1.9e-05 Score=57.54 Aligned_cols=102 Identities=13% Similarity=0.059 Sum_probs=55.2
Q ss_pred ChhhhhCCEEEEccccccccC---CCcchhhhhcCCCCCCCE--EEEchhhc--cCccccc-cccccc---cccceeecc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGP---CGKFWCHEHFDLEESPDI--VTFSKKMQ--LGGYFLK-PEFVPQ---QAYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr---~G~~~~~~~~g~~~~pDi--~t~gK~lg--~gG~~~~-~~~~~~---~~~~~~~T~ 69 (119)
++|++||+++|+||+|. ++. .|.. ....... .|. ++++|+++ .|+++.. +.+... ....+.+++
T Consensus 160 ~~a~~~~~~li~D~a~~-~~~~~~~~~~--~~~~~~~--~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 234 (347)
T 1jg8_A 160 TIAKEHGINVHIDGARI-FNASIASGVP--VKEYAGY--ADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGM 234 (347)
T ss_dssp HHHHHHTCEEEEEETTH-HHHHHHHCCC--HHHHHHT--CSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHCCCEEEeehhhh-hcchhhcCCC--hHHhccc--ccEEEEecccccCCCceEEEEcCHHHHHHHHHHHHHcCCch
Confidence 47899999999999874 221 1211 0111111 454 47999986 3434432 223221 111222343
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+++.++++..+|+...+ . .++..++.+++++.|+++
T Consensus 235 ~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~l~~~L~~~ 272 (347)
T 1jg8_A 235 RQAGVLAAAGIIALTKMVD-R-LKEDHENARFLALKLKEI 272 (347)
T ss_dssp SSTHHHHHHHHHHHHHSST-T-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHhc
Confidence 4566777777777765432 2 333445667888888775
No 209
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=97.81 E-value=2.2e-05 Score=59.39 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=57.4
Q ss_pred ChhhhhC-CEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-C----ccccc--ccccccc-ccceeecc
Q psy4800 1 MYEKYHG-SALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-G----GYFLK--PEFVPQQ-AYRVFNTW 69 (119)
Q Consensus 1 ~l~~~~~-~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-g----G~~~~--~~~~~~~-~~~~~~T~ 69 (119)
++|++|| +++|+||++..+ ..... .... +|++ +++|.+++ | |++.. +.+.+.. ......+.
T Consensus 175 ~la~~~g~~~livD~~~~~~-~~~~~-----~~~~--~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~ 246 (403)
T 3cog_A 175 HIVHKHGDIILVVDNTFMSP-YFQRP-----LALG--ADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGA 246 (403)
T ss_dssp HHHTSSSCCEEEEECTTTCT-TTCCT-----TTTT--CSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCEEEEECCCccc-ccCCc-----cccC--CeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCC
Confidence 4799999 999999998753 22222 2233 7887 89999962 2 55543 2332211 11122233
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLG 108 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 108 (119)
..+|+.+.++...++.+. ...++..++...+.+.|++
T Consensus 247 ~~~~~~~~~~~~~l~~l~--~r~~~~~~n~~~l~~~l~~ 283 (403)
T 3cog_A 247 VPSPIDCYLCNRGLKTLH--VRMEKHFKNGMAVAQFLES 283 (403)
T ss_dssp CCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHhc
Confidence 578988888877776543 2334445555555555544
No 210
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=97.75 E-value=0.00017 Score=53.83 Aligned_cols=99 Identities=19% Similarity=0.196 Sum_probs=56.8
Q ss_pred hhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc-cCc--ccc-cccccccc----------ccce
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ-LGG--YFL-KPEFVPQQ----------AYRV 65 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg-~gG--~~~-~~~~~~~~----------~~~~ 65 (119)
+++.||+++|+||+|..+.+. .++. .+|+++++ |.++ .|| ++. .+.+.+.. +.+.
T Consensus 187 i~~~~~~~vivD~a~~~~~~~--------~~~~-~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~ 257 (398)
T 2fyf_A 187 PEGSDDALVVIDATSGAGGLP--------VDIA-ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFL 257 (398)
T ss_dssp CTTCC-CEEEEECTTTTTTSC--------CCGG-GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGG
T ss_pred hhhhcCCeEEEEeccccCCcc--------cCcc-cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEE
Confidence 455589999999998633221 1111 27888555 9997 333 222 22221110 0000
Q ss_pred -----------eec-cCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 66 -----------FNT-WMGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 66 -----------~~T-~~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
..+ +..+..+.+++.++|+.+.++ +..++.+++.+++.+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 317 (398)
T 2fyf_A 258 SLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER 317 (398)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 122 235666777788888877643 35667778888888888765
No 211
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=97.74 E-value=4.4e-05 Score=57.36 Aligned_cols=100 Identities=12% Similarity=0.059 Sum_probs=56.9
Q ss_pred ChhhhhCCEEEEccccccccCC-CcchhhhhcCCCCCCCEE--EE--chhhcc--Ccccccc--ccccc-----cc----
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPC-GKFWCHEHFDLEESPDIV--TF--SKKMQL--GGYFLKP--EFVPQ-----QA---- 62 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~-G~~~~~~~~g~~~~pDi~--t~--gK~lg~--gG~~~~~--~~~~~-----~~---- 62 (119)
++|++||+++|+||+|+.+.+. |.. .+.. +|+. +| +|.++. +|+++.. .+.+. ..
T Consensus 151 ~~~~~~~~~li~D~a~~~~~~~~~~~-----~~~~--~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~ 223 (418)
T 2c81_A 151 EIAQEHNLFVIEDCAQSHGSVWNNQR-----AGTI--GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVY 223 (418)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEE-----TTSS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEE
T ss_pred HHHHHCCCEEEEECcccccCccCCEe-----cccc--cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccc
Confidence 4799999999999998754321 221 2222 4554 55 999962 4555532 22110 00
Q ss_pred ---------cce---------eeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 63 ---------YRV---------FNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 63 ---------~~~---------~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+. ..++..+++.++.....++.++ +..++.+++.+++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 286 (418)
T 2c81_A 224 CDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELD--DKNAIREKNAMFLNDALSKI 286 (418)
T ss_dssp CSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 011 1122356776666555555443 45667777888888888764
No 212
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=97.63 E-value=0.00012 Score=56.20 Aligned_cols=99 Identities=13% Similarity=0.017 Sum_probs=56.1
Q ss_pred Chhhh--hCCEEEEccccccccCCC-cchhhhhcCCCCCCCEE--EEchhhcc-----Ccccccc-ccccc-----cccc
Q psy4800 1 MYEKY--HGSALLIDEVQTGGGPCG-KFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKP-EFVPQ-----QAYR 64 (119)
Q Consensus 1 ~l~~~--~~~lli~DEv~tG~Gr~G-~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~-~~~~~-----~~~~ 64 (119)
++|++ ||+++|+||++. .+..+ ... .++ .|++ +++|.+|+ ||+++.+ .+.+. ....
T Consensus 204 ~ia~~~~~g~~livD~a~~-~~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~ 275 (427)
T 3hvy_A 204 KSIREVNENVIVFVDNCYG-EFVEEKEPT---DVG----ADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPG 275 (427)
T ss_dssp HHHHHHCSSSEEEEECTTC-TTTSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT
T ss_pred HHHHHhCCCCEEEEECCcc-ccccCCCCc---ccC----CeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCC
Confidence 47899 899999999974 22211 111 122 5776 89999963 3665543 23221 1122
Q ss_pred eeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
.+.+.+.++..+..++..++.+ +...++..++..++.+.|+++
T Consensus 276 ~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la~~L~~~ 318 (427)
T 3hvy_A 276 IGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCARIMELA 318 (427)
T ss_dssp TGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhC
Confidence 2222222222233344444333 456778889999999999876
No 213
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=97.63 E-value=0.00012 Score=55.75 Aligned_cols=98 Identities=13% Similarity=0.027 Sum_probs=57.1
Q ss_pred Chhhh--hCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc-----Ccccccc-ccccccc-c-ceeec
Q psy4800 1 MYEKY--HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKP-EFVPQQA-Y-RVFNT 68 (119)
Q Consensus 1 ~l~~~--~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~-~~~~~~~-~-~~~~T 68 (119)
++|++ ||+++|+||+|.- +...... ... +|++ +++|.+++ +|++..+ .+.+... . ....+
T Consensus 191 ~la~~~~~g~~livD~a~a~-~~~~~p~-----~~g--~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~ 262 (415)
T 2fq6_A 191 AAVRSVVPDAIIMIDNTWAA-GVLFKAL-----DFG--IDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQ 262 (415)
T ss_dssp HHHHHHCTTCEEEEECTTTT-TTSSCGG-----GGT--CSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTC
T ss_pred HHHHhhcCCCEEEEECCCcc-cccCCcc-----ccC--CeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCC
Confidence 47999 9999999999852 1112221 122 7887 78999962 4555432 2222110 0 11122
Q ss_pred cCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 69 WMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 69 ~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
..+|..+..++..++.+. ...++..++.+.+.+.|++.
T Consensus 263 -~~~~~~a~~~~~~l~~l~--~r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 263 -MVDADTAYITSRGLRTLG--VRLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp -CCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHHcC
Confidence 456777766666666553 34455666777777777664
No 214
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=97.61 E-value=8.2e-05 Score=56.99 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=57.3
Q ss_pred ChhhhhCCEEEEccccccccCCCc-chhhhhcCCCCCCCEEEE--chhhc---cCccccc-c-ccccc-cccceeeccCC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGK-FWCHEHFDLEESPDIVTF--SKKMQ---LGGYFLK-P-EFVPQ-QAYRVFNTWMG 71 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~-~~~~~~~g~~~~pDi~t~--gK~lg---~gG~~~~-~-~~~~~-~~~~~~~T~~~ 71 (119)
++|++||+++++||++.++ -.|. ....+..... +|++++ .|.++ +.|++.. + .+... .+.+.+.+ .+
T Consensus 255 ~la~~~g~~v~vD~A~~~~-~~g~~~~~~~~~~~~--~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g~~-~~ 330 (456)
T 2z67_A 255 KICENYDIPHIINGAYAIQ-NNYYLEKLKKAFKYR--VDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRA-SA 330 (456)
T ss_dssp HHHHHHTCCEEEECTTTTT-CHHHHHHHHHHHTSC--CSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCSCB-CS
T ss_pred HHHHHcCCcEEEECcchHH-HHHhhHHHHHhhCCC--CCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCCCC-CC
Confidence 4799999999999997544 2221 1111111113 888854 89753 2344443 2 23221 22222222 33
Q ss_pred CHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhhh
Q psy4800 72 DPGKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 72 ~p~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l~ 110 (119)
+| ..+..+++..+..+ +..++..++.+++++.|+++.
T Consensus 331 ~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 331 TP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33 33444555555432 456778888999999998763
No 215
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=97.58 E-value=0.00024 Score=53.20 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=61.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhc-CCCCCCCEEEEc----hhhc--cCccccc-c-ccc-------ccc---
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHF-DLEESPDIVTFS----KKMQ--LGGYFLK-P-EFV-------PQQ--- 61 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~-g~~~~pDi~t~g----K~lg--~gG~~~~-~-~~~-------~~~--- 61 (119)
++|+ ||+++|.|++|+ +|.. +..... +.- .|+.+++ |.++ .||+++. + .+. +..
T Consensus 150 ~la~-~~~~vi~D~a~a-~g~~---~~~~~~g~~~--~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~ 222 (377)
T 3ju7_A 150 ELEK-KGVPVVVDAAPG-FGLM---NGGMHYGQDF--SGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDT 222 (377)
T ss_dssp HHHH-TTCCBEEECTTC-TTCE---ETTEETTTTC--SSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCT
T ss_pred HHHh-cCCEEEEECCCc-cCCe---ECCEeccCCC--CcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCC
Confidence 4789 999999999985 4322 111112 111 5777665 9885 3455542 1 121 100
Q ss_pred ---ccceeeccCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhh
Q psy4800 62 ---AYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 62 ---~~~~~~T~~~~p~~~a~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l 109 (119)
....+..+..+++.++.+++.++.++ +..++.+++.+++.+.|+++
T Consensus 223 ~~~~~~~g~~~~~~~~~aa~~~~~l~~l~--~~~~~~~~~~~~~~~~L~~~ 271 (377)
T 3ju7_A 223 NRECTMMGFNCKMSEYAAAIGIATMKKWD--DKLKERTRISEWYKQLLQSN 271 (377)
T ss_dssp TSCBCSSCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHT
T ss_pred CCceeeccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCC
Confidence 01123355678998888888877664 35667778888888888775
No 216
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=97.55 E-value=4.3e-05 Score=58.81 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=55.4
Q ss_pred Chhhh--hCCEEEEccccccccCC-CcchhhhhcCCCCCCCEE--EEchhhcc-----Ccccccc-ccccc-----cccc
Q psy4800 1 MYEKY--HGSALLIDEVQTGGGPC-GKFWCHEHFDLEESPDIV--TFSKKMQL-----GGYFLKP-EFVPQ-----QAYR 64 (119)
Q Consensus 1 ~l~~~--~~~lli~DEv~tG~Gr~-G~~~~~~~~g~~~~pDi~--t~gK~lg~-----gG~~~~~-~~~~~-----~~~~ 64 (119)
++|++ ||+++|+||++.- +.. .... ..+ .|++ +++|.+|+ ||+++.+ .+.+. ....
T Consensus 204 ~la~~~~~g~~livD~a~~~-~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~ 275 (427)
T 3i16_A 204 DCVKNIRKDIICFVDNCYGE-FMDTKEPT---DVG----ADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPG 275 (427)
T ss_dssp HHHHHHCTTSEEEEECTTTT-TSSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT
T ss_pred HHHHHhCCCCEEEEECCCcc-ccccCCcc---ccC----CeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCc
Confidence 47899 9999999999742 221 1111 122 5776 89999963 3665543 23221 1111
Q ss_pred eeeccCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHhhh
Q psy4800 65 VFNTWMGDPGKVLLLKGIIDTIHN-ENLLDRVQKTGDILLNVRLGLG 110 (119)
Q Consensus 65 ~~~T~~~~p~~~a~a~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~l~ 110 (119)
.+.+ .++... ++..+++-++. +...++..++..++.+.|+++.
T Consensus 276 ~g~~-~~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3i16_A 276 IGGE-CGSTFG--VVRSMYQGLFLAPHISMEALKGAILCSRIMELAG 319 (427)
T ss_dssp TGGG-CCCCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcc-CCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222 121122 12333444433 4567788889999999998763
No 217
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=97.52 E-value=0.00062 Score=52.53 Aligned_cols=108 Identities=15% Similarity=0.053 Sum_probs=55.1
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc----cCccccccc--ccc---ccccceee--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ----LGGYFLKPE--FVP---QQAYRVFN-- 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg----~gG~~~~~~--~~~---~~~~~~~~-- 67 (119)
++|++||+++++|+++.|.-..+..+.....|++ ..|.+++ .|.++ .|++...+. +.. ..+.+...
T Consensus 265 ~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~-~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~ 343 (481)
T 4e1o_A 265 PICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIE-YADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHAN 343 (481)
T ss_dssp HHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGG-GCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTT
T ss_pred HHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcc-cCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcc
Confidence 4799999999999998653222222221123442 3688865 68874 223333321 110 01111110
Q ss_pred ----------cc-CCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 ----------TW-MGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 ----------T~-~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
+. .+.+.......++++.+.. ++..++..++.+++++.|+++
T Consensus 344 ~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 399 (481)
T 4e1o_A 344 SGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRND 399 (481)
T ss_dssp TTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 1111222333444544433 345667788888999888765
No 218
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=97.48 E-value=4e-05 Score=59.59 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=55.9
Q ss_pred ChhhhhCCEEEEccccccccCCC--cchhhhh----cCCC--CCCCE---EEEchhh-c----cCcccc----ccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCG--KFWCHEH----FDLE--ESPDI---VTFSKKM-Q----LGGYFL----KPEFVPQ 60 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G--~~~~~~~----~g~~--~~pDi---~t~gK~l-g----~gG~~~----~~~~~~~ 60 (119)
++|++||+++|+||++..+...+ ....... .+.. ....+ -+|+|++ | -+|++. .+.+.+.
T Consensus 262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~ 341 (498)
T 3ihj_A 262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQ 341 (498)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHH
T ss_pred HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHH
Confidence 47999999999999987542111 1111111 1100 00222 2899998 3 236654 2233221
Q ss_pred cccceeeccCCCHHHHHHHHHHHH-----------HHhh-hcHHHHHHHHHHHHHHHHHhh
Q psy4800 61 QAYRVFNTWMGDPGKVLLLKGIID-----------TIHN-ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 61 ~~~~~~~T~~~~p~~~a~a~a~l~-----------~i~~-~~~~~~~~~~g~~l~~~L~~l 109 (119)
.......+...++++..++.+.++ .+++ ...+++++++.+++.+.|+++
T Consensus 342 l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 402 (498)
T 3ihj_A 342 LVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV 402 (498)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111111222345565555555442 2322 345567788888888888764
No 219
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=97.46 E-value=0.00011 Score=56.88 Aligned_cols=78 Identities=18% Similarity=0.104 Sum_probs=44.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhcc--C---cccccc--ccccccccce-eeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQL--G---GYFLKP--EFVPQQAYRV-FNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg~--g---G~~~~~--~~~~~~~~~~-~~T~~ 70 (119)
++|++||+++|+||+|.. |..... .+ .. +|++ +++|.+++ | |++... .+.+...... .....
T Consensus 241 ~la~~~gi~livDea~~~-g~~~~~--~~---~~--~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~ 312 (464)
T 1ibj_A 241 EMAHAQGALVLVDNSIMS-PVLSRP--LE---LG--ADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_dssp HHHHTTTCEEEEECTTTC-TTTCCG--GG---TT--CSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCB
T ss_pred HHHHHcCCEEEEECCCcc-cccCCh--hh---cC--CEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCC
Confidence 479999999999999852 211111 11 23 7877 69999852 1 444432 2322111111 11224
Q ss_pred CCHHHHHHHHHHHHHH
Q psy4800 71 GDPGKVLLLKGIIDTI 86 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i 86 (119)
.+|+++.++.++|+.+
T Consensus 313 ~~~~~~~a~~~al~~~ 328 (464)
T 1ibj_A 313 LAPFDCWLCLRGIKTM 328 (464)
T ss_dssp CCHHHHHHHHHHHTTH
T ss_pred CCHHHHHHHHhchhhH
Confidence 5788888777776543
No 220
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=97.40 E-value=0.00055 Score=53.33 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=55.5
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc----cCccccccc-cc----cccccceee--
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ----LGGYFLKPE-FV----PQQAYRVFN-- 67 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg----~gG~~~~~~-~~----~~~~~~~~~-- 67 (119)
++|++||+++++|+++.|.-.....+-....|+. ..|.+ ...|.++ .|+++..+. +. ...+.+.+.
T Consensus 272 ~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~-~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 350 (511)
T 3vp6_A 272 DICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE-RANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQD 350 (511)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG-GCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSS
T ss_pred HHHHHcCCEEEEEccchhhHhhChhhhhhccCCc-cCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcc
Confidence 4899999999999998653111111111112332 36877 4668874 122333221 11 111111110
Q ss_pred ------------cc-CCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 68 ------------TW-MGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 68 ------------T~-~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
|. .+.+..+....++|+.+.. +++.++..++.+++++.|+++
T Consensus 351 ~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~ 408 (511)
T 3vp6_A 351 KHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR 408 (511)
T ss_dssp CSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 10 1112233344455555543 356677888999999999864
No 221
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=97.38 E-value=0.00095 Score=51.51 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=55.0
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc----cCccccccc-c-cc---cccccee---
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ----LGGYFLKPE-F-VP---QQAYRVF--- 66 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg----~gG~~~~~~-~-~~---~~~~~~~--- 66 (119)
++|++||+++++|+++.|.-..+..+.....+++ ..|.+++ .|.++ .|+++..+. . .. ..+.+..
T Consensus 258 ~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~-~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~ 336 (475)
T 3k40_A 258 PVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE-SADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDM 336 (475)
T ss_dssp HHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG-GCSEEEECHHHHSSCCSSCEEEEESSGGGC---------------
T ss_pred HHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc-cCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCc
Confidence 4899999999999998652122221111112432 3688865 58774 223333321 1 11 1111111
Q ss_pred ----------eccCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhh
Q psy4800 67 ----------NTWMGDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ----------~T~~~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l 109 (119)
+...+.+.......++|+.+.. ++..++..++.+++++.|+++
T Consensus 337 ~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 337 QGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp ------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1111222233444555665543 345667788889999998875
No 222
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=97.20 E-value=0.00041 Score=54.39 Aligned_cols=108 Identities=12% Similarity=0.027 Sum_probs=58.4
Q ss_pred ChhhhhCCEEEEccccccccCCCcc---hhhhhcCCCCCCCEEEEc--hhhc--cCc-ccc-c-cccccccccceeeccC
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKF---WCHEHFDLEESPDIVTFS--KKMQ--LGG-YFL-K-PEFVPQQAYRVFNTWM 70 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~---~~~~~~g~~~~pDi~t~g--K~lg--~gG-~~~-~-~~~~~~~~~~~~~T~~ 70 (119)
++|++||+++++||+|-+.-+.... .+++ +| . .|+++.| |-+- .|| ++. . ..+.+.....+-.|.+
T Consensus 240 eIch~~gIpllVDeAhGah~~~~~~lp~sA~~-~G-r--AD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yPGr~S 315 (501)
T 3hl2_A 240 VICANYDIPHIVNNAYGVQSSKCMHLIQQGAR-VG-R--IDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRAS 315 (501)
T ss_dssp HHHHHHTCCEEEECTTCTTCHHHHHHHHHHHH-HS-C--CCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSCSCBC
T ss_pred HHHHHcCCeEEEeCcchhhhhhhhhhHHHHHh-cC-C--CcEEEecccccceeecCceEEEeCCHHHHHHHHHhCCCCCC
Confidence 4899999999999997542111111 1222 34 2 7988655 3331 234 332 2 2222211111112324
Q ss_pred CCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4800 71 GDPGKVLLLKGIIDTIHN---ENLLDRVQKTGDILLNVRLGLGQESN 114 (119)
Q Consensus 71 ~~p~~~a~a~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~l~~~~p 114 (119)
+.|.. ....++..+-. .++.++..++.++|+++|+++...+.
T Consensus 316 ~Spsl--dl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~g 360 (501)
T 3hl2_A 316 ASPSL--DVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN 360 (501)
T ss_dssp SHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44443 22333333322 35667788999999999999987655
No 223
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=97.19 E-value=0.00055 Score=51.23 Aligned_cols=101 Identities=18% Similarity=0.121 Sum_probs=52.3
Q ss_pred hhhh-hC--CEEEEccccccccCCCcchhhhhcCCCCCCCEE--EEchhhc-cC---ccccc-c-cccccc-ccceeecc
Q psy4800 2 YEKY-HG--SALLIDEVQTGGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ-LG---GYFLK-P-EFVPQQ-AYRVFNTW 69 (119)
Q Consensus 2 l~~~-~~--~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg-~g---G~~~~-~-~~~~~~-~~~~~~T~ 69 (119)
||++ |+ +++|+||++. .+.. .... ...+ .+|+ +|+|.+| .| |++.. + .+.... ......++
T Consensus 177 l~~~~~~~~~~ii~De~y~-~~~~-~~l~-~~~~----~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~ 249 (391)
T 3bwn_A 177 VVNRPDDDEAKVIHDFAYY-WPHY-TPIT-RRQD----HDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSI 249 (391)
T ss_dssp CC-----CCCEEEEECTTC-STTT-SCCC-CCBC----CSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHS
T ss_pred HHHHhhcCCCEEEEeCCCC-CCCC-Cccc-cCCC----CeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhccccc
Confidence 4555 77 9999999985 2211 1111 0111 3443 8999986 45 66553 2 333211 11112244
Q ss_pred CCCHHHHHHHHHHHHHHh----------h--hcHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIH----------N--ENLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~----------~--~~~~~~~~~~g~~l~~~L~~l 109 (119)
+.++++..++.++|+.-. + ++.+++++++-+++.+.|+++
T Consensus 250 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (391)
T 3bwn_A 250 GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES 301 (391)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 667887777777776532 1 134445566666666766654
No 224
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=96.90 E-value=0.0071 Score=46.29 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=27.5
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEE--chhhc
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTF--SKKMQ 47 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~--gK~lg 47 (119)
++|++||+++++|+++.++-.....+.....++. ..|.+++ .|.++
T Consensus 259 ~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~-~adsi~~~~hK~~~ 306 (486)
T 1js3_A 259 PICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE-FADSFNFNPHKWLL 306 (486)
T ss_dssp HHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG-GCSEEEECHHHHSS
T ss_pred HHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc-ccCeeEEchhhhcC
Confidence 4799999999999998653211111111112332 3688764 68874
No 225
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=96.78 E-value=0.0023 Score=50.36 Aligned_cols=51 Identities=16% Similarity=-0.015 Sum_probs=31.0
Q ss_pred hh--hhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc-cC---ccccc
Q psy4800 2 YE--KYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ-LG---GYFLK 54 (119)
Q Consensus 2 l~--~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg-~g---G~~~~ 54 (119)
+| ++||+++|+||++..|............+.. ..+.+|||.+| .| |+++.
T Consensus 273 ~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~--i~~~S~SK~~g~~GlRiG~~~~ 329 (546)
T 2zy4_A 273 IVAEHRPDLMILTDDVYGTFADDFQSLFAICPENT--LLVYSFSKYFGATGWRLGVVAA 329 (546)
T ss_dssp HHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGE--EEEEESTTTTTCGGGCEEEEEE
T ss_pred HHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCE--EEEEeCccccCCCCcceEEEEE
Confidence 56 7899999999999877532222211111111 33559999996 44 66553
No 226
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=96.44 E-value=0.0024 Score=49.55 Aligned_cols=111 Identities=11% Similarity=0.009 Sum_probs=52.2
Q ss_pred ChhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc--cC-cccc-cc-ccccccccceeeccCCCH
Q psy4800 1 MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ--LG-GYFL-KP-EFVPQQAYRVFNTWMGDP 73 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg--~g-G~~~-~~-~~~~~~~~~~~~T~~~~p 73 (119)
++|++||++|++||+|.+.-+.......+.+.. ...|+++++ |.++ .+ +++. .+ .........+..+-..+|
T Consensus 222 ~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~-~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g~~s~Sp 300 (450)
T 3bc8_A 222 VICANYDIPHVVNNAYGLQSSKCMHLIQQGARV-GRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASP 300 (450)
T ss_dssp HHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHH-SCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCSCBCSHH
T ss_pred HHHHHCCCeEEEECCCchhhhhhHhHHHHHhcc-cCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhcCCcccH
Confidence 489999999999999754322111111111111 127988766 6664 23 3333 12 111111111101112344
Q ss_pred HHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4800 74 GKVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGLGQESN 114 (119)
Q Consensus 74 ~~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l~~~~p 114 (119)
. .... .++..+-.+ ++.++..++.+++++.|+++.+++.
T Consensus 301 s-L~l~-~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g 342 (450)
T 3bc8_A 301 S-LDVL-ITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHN 342 (450)
T ss_dssp H-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred H-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC
Confidence 2 2211 222222112 2333447778899999988875444
No 227
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=96.31 E-value=0.01 Score=44.93 Aligned_cols=20 Identities=15% Similarity=0.094 Sum_probs=17.5
Q ss_pred ChhhhhCCEEEEcccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGG 20 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~G 20 (119)
++|++|++++|.||++.+|.
T Consensus 201 ~~~~~~~~~vi~De~Y~~l~ 220 (405)
T 3k7y_A 201 EIVLHKKHVIIFDIAYQGFG 220 (405)
T ss_dssp HHHHHHCCEEEEEESCTTTS
T ss_pred HHHHHCCeEEEEecCccccc
Confidence 47899999999999998773
No 228
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=96.31 E-value=0.0085 Score=46.47 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 75 KVLLLKGIIDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 75 ~~a~a~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.+.+..++++.+..+ +..++..++.++|.+.|+++
T Consensus 324 ~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (502)
T 3hbx_A 324 QVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKT 361 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 445555666665443 45566778888899888875
No 229
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=96.14 E-value=0.0052 Score=47.02 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=17.9
Q ss_pred ChhhhhCCEEEEcccccccc
Q psy4800 1 MYEKYHGSALLIDEVQTGGG 20 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~tG~G 20 (119)
++|++|++++|.||+..||.
T Consensus 217 ~~~~~~~~~~~~D~~Y~~~~ 236 (420)
T 4h51_A 217 SLMLAKHHQVFFDSAYQGYA 236 (420)
T ss_dssp HHHHHHTCEEEEEESCTTTT
T ss_pred HHHHhcCceEeeehhhhhhc
Confidence 47899999999999999884
No 230
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=95.99 E-value=0.024 Score=42.90 Aligned_cols=19 Identities=16% Similarity=-0.024 Sum_probs=15.8
Q ss_pred Chhhhh------CCEEEEccccccc
Q psy4800 1 MYEKYH------GSALLIDEVQTGG 19 (119)
Q Consensus 1 ~l~~~~------~~lli~DEv~tG~ 19 (119)
++|++| |+++++|+++.++
T Consensus 211 ~ia~~~~~~~~~~~~l~vD~a~~~~ 235 (452)
T 2dgk_A 211 DALDKFQADTGIDIDMHIDAASGGF 235 (452)
T ss_dssp HHHHHHHHHHCCCCCEEEECTTGGG
T ss_pred HHHHHHhhccCCCCcEEEEcccHHH
Confidence 368885 9999999998764
No 231
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=95.18 E-value=0.18 Score=37.83 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=17.8
Q ss_pred HHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 83 IDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 83 l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
++.+.++ +..++.+++.+++.+.|+++
T Consensus 334 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 363 (438)
T 1wyu_A 334 LAALGPEGLREVALKSVEMAHKLHALLLEV 363 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5555432 35566778888888888765
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=94.35 E-value=0.086 Score=39.41 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=55.7
Q ss_pred hhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEc--hhhc---cCccccccccc----c-ccccc-------
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFS--KKMQ---LGGYFLKPEFV----P-QQAYR------- 64 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~g--K~lg---~gG~~~~~~~~----~-~~~~~------- 64 (119)
++++ |+++++|-+|+ +|.. ..+++ ..|+++++ |.+| .|.+++++.+. + ..+..
T Consensus 160 i~~~-~~~~~vD~~q~-~g~~-------~id~~-~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~ 229 (361)
T 3m5u_A 160 YPKT-KTPLIVDASSD-FFSR-------KVDFS-NIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHA 229 (361)
T ss_dssp CCCC-SSCEEEECGGG-TTSS-------CCCCT-TEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHH
T ss_pred cccc-CCEEEEEcccc-cCCC-------CCCcc-cCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHh
Confidence 4554 99999999976 4322 12232 26777554 7775 22233333221 1 01111
Q ss_pred -eeecc-CCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 65 -VFNTW-MGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 65 -~~~T~-~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
...++ ..|-....+..++|+++.+. +..++.+++.+++++.|+++
T Consensus 230 ~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~ 280 (361)
T 3m5u_A 230 ENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLS 280 (361)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC
Confidence 01222 24555667778899998765 35567788888888888765
No 233
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=94.22 E-value=0.33 Score=36.47 Aligned_cols=101 Identities=7% Similarity=-0.025 Sum_probs=55.6
Q ss_pred hhhhhCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc--c-Ccccccccccc----ccccce--------e
Q psy4800 2 YEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ--L-GGYFLKPEFVP----QQAYRV--------F 66 (119)
Q Consensus 2 l~~~~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg--~-gG~~~~~~~~~----~~~~~~--------~ 66 (119)
+|+++|+++++|=+|+ +|.. ..-.+.++ .....-=|.+| + |.+++++.+.+ ..+.+. .
T Consensus 172 i~~~~~~~~~vD~~q~-~g~~--~id~~~~~----~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~ 244 (377)
T 3e77_A 172 IPDVKGAVLVCDMSSN-FLSK--PVDVSKFG----VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNS 244 (377)
T ss_dssp CCCCTTCCEEEECTTT-TTSS--CCCGGGCS----EEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTT
T ss_pred hhccCCCEEEEEcccc-cCCC--CCchhhcC----EEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcC
Confidence 4788999999999976 4322 11122222 12223346665 2 22233333221 111111 1
Q ss_pred eccC-CCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 67 NTWM-GDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 67 ~T~~-~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
++++ .|-....+..++|+++.++ +..++.+++.+++++.|+++
T Consensus 245 ~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~ 292 (377)
T 3e77_A 245 SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS 292 (377)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 2322 3445666677889988764 35567788888888888875
No 234
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=89.96 E-value=0.8 Score=34.41 Aligned_cols=97 Identities=8% Similarity=-0.066 Sum_probs=51.1
Q ss_pred hCCEEEEccccccccCCCcchhhhhcCCCCCCCEEEEchhhc---cCcccccccccc----ccccc--------eeecc-
Q psy4800 6 HGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQ---LGGYFLKPEFVP----QQAYR--------VFNTW- 69 (119)
Q Consensus 6 ~~~lli~DEv~tG~Gr~G~~~~~~~~g~~~~pDi~t~gK~lg---~gG~~~~~~~~~----~~~~~--------~~~T~- 69 (119)
+|+++++|=+|+ +|.. ..-.+.++ .++..-=|.+| .|.+++++.+.+ ..+.+ ...++
T Consensus 191 ~g~~~~vDa~qs-~g~~--pidv~~~~----~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g 263 (386)
T 3qm2_A 191 PEVVVTADFSST-ILSA--PLDVSRYG----VIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN 263 (386)
T ss_dssp TTCCEEEECTTT-TTSS--CCCGGGCS----EEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-----
T ss_pred CCCEEEEEcccc-cCCC--CCCccccC----EEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC
Confidence 689999999975 4322 11122222 23334447765 223333433221 11111 01111
Q ss_pred CCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHhh
Q psy4800 70 MGDPGKVLLLKGIIDTIHNE----NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~l 109 (119)
..|..+..+..++++++.+. +..++.+++.+++++.|+++
T Consensus 264 Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~ 307 (386)
T 3qm2_A 264 TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS 307 (386)
T ss_dssp --CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC
Confidence 23334566677888888654 35567788888888888775
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=89.03 E-value=0.65 Score=36.37 Aligned_cols=104 Identities=16% Similarity=0.146 Sum_probs=57.2
Q ss_pred ChhhhhCCEEEEccccc-cccCCCcchhhhhcCCCCCCCEE--EEchhhc--cCccccccc-c---------------cc
Q psy4800 1 MYEKYHGSALLIDEVQT-GGGPCGKFWCHEHFDLEESPDIV--TFSKKMQ--LGGYFLKPE-F---------------VP 59 (119)
Q Consensus 1 ~l~~~~~~lli~DEv~t-G~Gr~G~~~~~~~~g~~~~pDi~--t~gK~lg--~gG~~~~~~-~---------------~~ 59 (119)
++|++.|++|++|=+|. |+=-.| .+- ..+ ...|++ |.=|.|. -||++.... . ..
T Consensus 225 eIAd~vGA~Lm~DmAHiaGLVA~g-~~p-sP~---~~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~k 299 (490)
T 3ou5_A 225 EVCDEVKAHLLADMAHISGLVAAK-VIP-SPF---KHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFED 299 (490)
T ss_dssp HHHHHHTCEEEEECGGGHHHHHTT-SSC-CGG---GTCSEEEEESSSTTCSCSCEEEEEECSEEEECC--CCEEECCCHH
T ss_pred HHHhhcccEEEechhhhhhhhccc-ccC-Ccc---ccceEEeccccccccCCCceEEEeccccccccccccchhHHHHHH
Confidence 47999999999999995 651112 111 111 127998 5679996 478877422 1 00
Q ss_pred cccccee-eccCCCHHHHHHHHHH-HHHHhhh---cHHHHHHHHHHHHHHHHHhh
Q psy4800 60 QQAYRVF-NTWMGDPGKVLLLKGI-IDTIHNE---NLLDRVQKTGDILLNVRLGL 109 (119)
Q Consensus 60 ~~~~~~~-~T~~~~p~~~a~a~a~-l~~i~~~---~~~~~~~~~g~~l~~~L~~l 109 (119)
.-....| .+.+|+....-+++++ +....++ +..+++-++.+.|.+.|.+.
T Consensus 300 kin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~ 354 (490)
T 3ou5_A 300 RINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 0001112 2223333333333332 3332233 45567888888888888765
No 236
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=77.98 E-value=2.5 Score=31.64 Aligned_cols=73 Identities=16% Similarity=0.083 Sum_probs=38.4
Q ss_pred CCEE--EEchhhc-cC---ccccc--ccccccc-ccceeeccCCCHHHHHHHHHHHHHHhh---------hc----HHHH
Q psy4800 37 PDIV--TFSKKMQ-LG---GYFLK--PEFVPQQ-AYRVFNTWMGDPGKVLLLKGIIDTIHN---------EN----LLDR 94 (119)
Q Consensus 37 pDi~--t~gK~lg-~g---G~~~~--~~~~~~~-~~~~~~T~~~~p~~~a~a~a~l~~i~~---------~~----~~~~ 94 (119)
.||+ +|+|.+| .| |++.. ..+.+.. ......+.+.++++..++.+.|+...+ ++ .+++
T Consensus 242 ~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~ 321 (427)
T 2hox_A 242 EDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKK 321 (427)
T ss_dssp CSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHH
T ss_pred ceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHH
Confidence 4555 8999986 44 66654 2343321 111123345667766666666664311 12 3345
Q ss_pred HHHHHHHHHHHHHhh
Q psy4800 95 VQKTGDILLNVRLGL 109 (119)
Q Consensus 95 ~~~~g~~l~~~L~~l 109 (119)
++++-+++.+.|+++
T Consensus 322 ~~~~~~~l~~~L~~~ 336 (427)
T 2hox_A 322 LRERWVNITALLDQS 336 (427)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhC
Confidence 556666666666543
No 237
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=68.37 E-value=2.5 Score=28.76 Aligned_cols=15 Identities=33% Similarity=0.470 Sum_probs=12.2
Q ss_pred hhhCCEEEEcccccc
Q psy4800 4 KYHGSALLIDEVQTG 18 (119)
Q Consensus 4 ~~~~~lli~DEv~tG 18 (119)
+..+.++|+||+|.=
T Consensus 85 ~~~~~vliIDEAq~l 99 (199)
T 2r2a_A 85 ENIGSIVIVDEAQDV 99 (199)
T ss_dssp GGTTCEEEETTGGGT
T ss_pred ccCceEEEEEChhhh
Confidence 345999999999973
No 238
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=53.67 E-value=12 Score=16.76 Aligned_cols=14 Identities=36% Similarity=0.529 Sum_probs=6.6
Q ss_pred hcHHHHHHHHHHHH
Q psy4800 89 ENLLDRVQKTGDIL 102 (119)
Q Consensus 89 ~~~~~~~~~~g~~l 102 (119)
++++++++++-+.+
T Consensus 11 edlqerlrklrkkl 24 (27)
T 3twe_A 11 EDLQERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 34555555443333
No 239
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=51.48 E-value=5.2 Score=26.27 Aligned_cols=10 Identities=40% Similarity=0.660 Sum_probs=7.2
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 164 ~~iIiDEah~ 173 (216)
T 3b6e_A 164 SLIIIDECHH 173 (216)
T ss_dssp SEEEETTC--
T ss_pred cEEEEECchh
Confidence 4899999996
No 240
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=45.64 E-value=15 Score=27.56 Aligned_cols=12 Identities=33% Similarity=0.565 Sum_probs=10.3
Q ss_pred EEEEc-ccccccc
Q psy4800 9 ALLID-EVQTGGG 20 (119)
Q Consensus 9 lli~D-Ev~tG~G 20 (119)
++|+| |||+|=|
T Consensus 162 V~IvD~DvHHGnG 174 (375)
T 1c3p_A 162 ILYIDLDAHHCDG 174 (375)
T ss_dssp EEEEECSSSCCHH
T ss_pred EEEEecCCCCCHH
Confidence 89999 9999864
No 241
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=39.91 E-value=7.5 Score=25.43 Aligned_cols=10 Identities=20% Similarity=0.544 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 148 ~~lViDEah~ 157 (206)
T 1vec_A 148 QMIVLDEADK 157 (206)
T ss_dssp CEEEEETHHH
T ss_pred CEEEEEChHH
Confidence 4799999996
No 242
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=38.30 E-value=24 Score=26.47 Aligned_cols=32 Identities=25% Similarity=0.524 Sum_probs=18.8
Q ss_pred hhhCC--EEEEc-cccccccCCCcchhhhhcCCCCCCCEEEEc
Q psy4800 4 KYHGS--ALLID-EVQTGGGPCGKFWCHEHFDLEESPDIVTFS 43 (119)
Q Consensus 4 ~~~~~--lli~D-Ev~tG~Gr~G~~~~~~~~g~~~~pDi~t~g 43 (119)
+++++ ++|+| |||+|=|. .+-+--+ |+++++|
T Consensus 167 ~~~g~~RV~IvD~DvHHGnGT------q~iF~~d--~~Vl~~S 201 (369)
T 1zz1_A 167 AVLGMERVAILDWDVHHGNGT------QDIWWND--PSVLTIS 201 (369)
T ss_dssp HTSCCSCEEEEECSSSCCHHH------HHHTTTC--TTEEEEE
T ss_pred HhcCCCeEEEEecCCCCchhh------hHHhcCC--CCEEEEe
Confidence 34443 88888 99997642 1222223 7777665
No 243
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=37.83 E-value=8.5 Score=25.13 Aligned_cols=10 Identities=20% Similarity=0.431 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 146 ~~iViDEah~ 155 (207)
T 2gxq_A 146 EVAVLDEADE 155 (207)
T ss_dssp SEEEEESHHH
T ss_pred eEEEEEChhH
Confidence 4799999986
No 244
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=37.80 E-value=12 Score=26.13 Aligned_cols=11 Identities=18% Similarity=0.341 Sum_probs=9.0
Q ss_pred CEEEEcccccc
Q psy4800 8 SALLIDEVQTG 18 (119)
Q Consensus 8 ~lli~DEv~tG 18 (119)
-++|+||+|.-
T Consensus 227 ~~vIiDEaH~~ 237 (282)
T 1rif_A 227 GMMMNDECHLA 237 (282)
T ss_dssp EEEEEETGGGC
T ss_pred CEEEEECCccC
Confidence 47899999973
No 245
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=37.59 E-value=11 Score=25.77 Aligned_cols=10 Identities=40% Similarity=0.594 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 194 ~llIiDEaH~ 203 (237)
T 2fz4_A 194 MLLIFDEVHH 203 (237)
T ss_dssp SEEEEECSSC
T ss_pred CEEEEECCcc
Confidence 5899999986
No 246
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=37.18 E-value=36 Score=19.66 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=22.0
Q ss_pred hhcHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4800 88 NENLLDRVQKTGDILLNVRLGLGQESN 114 (119)
Q Consensus 88 ~~~~~~~~~~~g~~l~~~L~~l~~~~p 114 (119)
+..+..++++.-++|..+++++.++|.
T Consensus 16 d~~Ll~kLr~sr~RFQ~~Mq~lieKYn 42 (81)
T 3r45_C 16 DDQLLQKLRASRRRFQRRMQRLIEKYN 42 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345788899999999999999887764
No 247
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=36.43 E-value=9.2 Score=25.37 Aligned_cols=10 Identities=20% Similarity=0.541 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 160 ~~lViDEah~ 169 (220)
T 1t6n_A 160 KHFILDECDK 169 (220)
T ss_dssp CEEEEESHHH
T ss_pred CEEEEcCHHH
Confidence 4799999996
No 248
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=36.23 E-value=9.7 Score=25.46 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 169 ~~lViDEah~ 178 (228)
T 3iuy_A 169 TYLVIDEADK 178 (228)
T ss_dssp CEEEECCHHH
T ss_pred eEEEEECHHH
Confidence 4789999986
No 249
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=35.46 E-value=9.7 Score=25.28 Aligned_cols=10 Identities=20% Similarity=0.541 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 157 ~~iViDEah~ 166 (224)
T 1qde_A 157 KMFILDEADE 166 (224)
T ss_dssp CEEEEETHHH
T ss_pred cEEEEcChhH
Confidence 5899999996
No 250
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=34.85 E-value=11 Score=25.15 Aligned_cols=10 Identities=30% Similarity=0.531 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 152 ~~lViDEah~ 161 (219)
T 1q0u_A 152 HILVVDEADL 161 (219)
T ss_dssp CEEEECSHHH
T ss_pred eEEEEcCchH
Confidence 4799999996
No 251
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=34.65 E-value=11 Score=25.56 Aligned_cols=10 Identities=30% Similarity=0.461 Sum_probs=8.4
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 177 ~~lViDEah~ 186 (245)
T 3dkp_A 177 EWLVVDESDK 186 (245)
T ss_dssp CEEEESSHHH
T ss_pred cEEEEeChHH
Confidence 3689999996
No 252
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=33.26 E-value=12 Score=25.23 Aligned_cols=9 Identities=22% Similarity=0.586 Sum_probs=8.3
Q ss_pred EEEEccccc
Q psy4800 9 ALLIDEVQT 17 (119)
Q Consensus 9 lli~DEv~t 17 (119)
++|+||+|.
T Consensus 169 ~lViDEah~ 177 (230)
T 2oxc_A 169 LFILDEADK 177 (230)
T ss_dssp EEEESSHHH
T ss_pred EEEeCCchH
Confidence 899999996
No 253
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=32.96 E-value=12 Score=25.19 Aligned_cols=9 Identities=33% Similarity=0.630 Sum_probs=8.2
Q ss_pred EEEEccccc
Q psy4800 9 ALLIDEVQT 17 (119)
Q Consensus 9 lli~DEv~t 17 (119)
++|+||+|+
T Consensus 174 ~lViDEah~ 182 (236)
T 2pl3_A 174 MLVLDEADR 182 (236)
T ss_dssp EEEETTHHH
T ss_pred EEEEeChHH
Confidence 899999996
No 254
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=32.95 E-value=15 Score=26.71 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=9.1
Q ss_pred CEEEEcccccc
Q psy4800 8 SALLIDEVQTG 18 (119)
Q Consensus 8 ~lli~DEv~tG 18 (119)
-++|+||+|+-
T Consensus 127 ~~vIiDEaH~~ 137 (494)
T 1wp9_A 127 SLIVFDEAHRA 137 (494)
T ss_dssp SEEEEETGGGC
T ss_pred eEEEEECCccc
Confidence 37999999973
No 255
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=30.88 E-value=13 Score=25.14 Aligned_cols=10 Identities=30% Similarity=0.567 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 178 ~~lViDEah~ 187 (242)
T 3fe2_A 178 TYLVLDEADR 187 (242)
T ss_dssp CEEEETTHHH
T ss_pred cEEEEeCHHH
Confidence 3799999986
No 256
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=30.05 E-value=25 Score=21.39 Aligned_cols=14 Identities=29% Similarity=0.648 Sum_probs=12.0
Q ss_pred cCCCCCCCEEEEchhh
Q psy4800 31 FDLEESPDIVTFSKKM 46 (119)
Q Consensus 31 ~g~~~~pDi~t~gK~l 46 (119)
.|.+ |||+.+||-.
T Consensus 32 dG~e--PDIiL~G~ea 45 (103)
T 2pk8_A 32 DGFN--PDIILFGREA 45 (103)
T ss_dssp TTCC--CCEEEECHHH
T ss_pred cCCC--CCeEEEcHHH
Confidence 5777 9999999975
No 257
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=29.87 E-value=19 Score=23.70 Aligned_cols=10 Identities=50% Similarity=0.677 Sum_probs=8.4
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++++||+|.
T Consensus 78 dvviIDE~Q~ 87 (184)
T 2orw_A 78 RGVFIDEVQF 87 (184)
T ss_dssp EEEEECCGGG
T ss_pred CEEEEECccc
Confidence 3789999985
No 258
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=29.58 E-value=14 Score=24.99 Aligned_cols=10 Identities=20% Similarity=0.508 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 175 ~~lViDEah~ 184 (237)
T 3bor_A 175 KMFVLDEADE 184 (237)
T ss_dssp CEEEEESHHH
T ss_pred cEEEECCchH
Confidence 4799999985
No 259
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=29.41 E-value=19 Score=24.31 Aligned_cols=10 Identities=30% Similarity=0.720 Sum_probs=8.4
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 178 ~~lVlDEah~ 187 (235)
T 3llm_A 178 SHVIVDEIHE 187 (235)
T ss_dssp CEEEECCTTS
T ss_pred cEEEEECCcc
Confidence 4789999985
No 260
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=28.89 E-value=14 Score=25.04 Aligned_cols=10 Identities=20% Similarity=0.481 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 176 ~~lViDEah~ 185 (253)
T 1wrb_A 176 KYIVLDEADR 185 (253)
T ss_dssp CEEEEETHHH
T ss_pred CEEEEeCHHH
Confidence 3799999996
No 261
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=28.74 E-value=15 Score=25.68 Aligned_cols=10 Identities=30% Similarity=0.534 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 131 ~~iViDEah~ 140 (337)
T 2z0m_A 131 EIVIIDEADL 140 (337)
T ss_dssp SEEEEESHHH
T ss_pred cEEEEEChHH
Confidence 4789999996
No 262
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.63 E-value=19 Score=24.83 Aligned_cols=15 Identities=7% Similarity=-0.352 Sum_probs=12.6
Q ss_pred ChhhhhCCEEEEccc
Q psy4800 1 MYEKYHGSALLIDEV 15 (119)
Q Consensus 1 ~l~~~~~~lli~DEv 15 (119)
++|+++|+.+|+|--
T Consensus 97 ~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 97 DTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHCCCeEEEEec
Confidence 379999999998864
No 263
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=27.32 E-value=79 Score=19.23 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=18.7
Q ss_pred CCCHHHHH--HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhhhhcC
Q psy4800 70 MGDPGKVL--LLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQES 113 (119)
Q Consensus 70 ~~~p~~~a--~a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~ 113 (119)
..||.+.+ .... -.+.++.-...|+.+++.+...+
T Consensus 62 ~~NPa~~a~~~~~~---------~~e~Lq~E~erLr~~v~~lEeg~ 98 (100)
T 1go4_E 62 SLNPTSVARQRLRE---------DHSQLQAECERLRGLLRAMERGG 98 (100)
T ss_dssp SSCHHHHHHHHHHH---------HHHHHHHHHHHHHHHHTTCC---
T ss_pred cCChHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhccC
Confidence 45898766 3322 33445555566777776665433
No 264
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=26.91 E-value=56 Score=16.49 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=17.4
Q ss_pred hcHHHHHHHHHHHHHHHHHhhhhcC
Q psy4800 89 ENLLDRVQKTGDILLNVRLGLGQES 113 (119)
Q Consensus 89 ~~~~~~~~~~g~~l~~~L~~l~~~~ 113 (119)
++..+++-..-+.+++.|++|..+|
T Consensus 11 ~~rkerIv~eCnavrqALQdLlseY 35 (40)
T 4e17_B 11 DDRRERIVAECNAVRQALQDLLSEY 35 (40)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666677888888887654
No 265
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=26.53 E-value=21 Score=25.02 Aligned_cols=14 Identities=7% Similarity=0.161 Sum_probs=11.6
Q ss_pred ChhhhhCCEEEEcc
Q psy4800 1 MYEKYHGSALLIDE 14 (119)
Q Consensus 1 ~l~~~~~~lli~DE 14 (119)
++|++|++.||+++
T Consensus 90 ~l~~~~~~~liInd 103 (243)
T 3o63_A 90 DAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHTTCEEEEES
T ss_pred HHHHhhCCEEEEeC
Confidence 37999999999944
No 266
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=26.52 E-value=18 Score=25.03 Aligned_cols=10 Identities=40% Similarity=0.654 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 203 ~~lViDEah~ 212 (262)
T 3ly5_A 203 QCLVIDEADR 212 (262)
T ss_dssp CEEEECSHHH
T ss_pred CEEEEcChHH
Confidence 4689999986
No 267
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=25.86 E-value=18 Score=25.54 Aligned_cols=10 Identities=20% Similarity=0.491 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 149 ~~iIiDEah~ 158 (367)
T 1hv8_A 149 KYFILDEADE 158 (367)
T ss_dssp CEEEEETHHH
T ss_pred CEEEEeCchH
Confidence 4799999996
No 268
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=25.64 E-value=19 Score=24.68 Aligned_cols=9 Identities=33% Similarity=0.564 Sum_probs=8.1
Q ss_pred EEEEccccc
Q psy4800 9 ALLIDEVQT 17 (119)
Q Consensus 9 lli~DEv~t 17 (119)
++|+||+|.
T Consensus 189 ~lViDEah~ 197 (249)
T 3ber_A 189 YLVMDEADR 197 (249)
T ss_dssp EEEECSHHH
T ss_pred EEEEcChhh
Confidence 799999985
No 269
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=24.64 E-value=26 Score=26.14 Aligned_cols=10 Identities=40% Similarity=0.594 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 194 ~liIvDEaH~ 203 (472)
T 2fwr_A 194 MLLIFDEVHH 203 (472)
T ss_dssp SEEEEETGGG
T ss_pred CEEEEECCcC
Confidence 4799999997
No 270
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=24.51 E-value=19 Score=25.63 Aligned_cols=10 Identities=20% Similarity=0.524 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 147 ~~iIiDEah~ 156 (395)
T 3pey_A 147 KIFVLDEADN 156 (395)
T ss_dssp CEEEEETHHH
T ss_pred CEEEEEChhh
Confidence 3789999995
No 271
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=24.43 E-value=20 Score=25.62 Aligned_cols=10 Identities=20% Similarity=0.541 Sum_probs=8.4
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 154 ~~vViDEaH~ 163 (391)
T 1xti_A 154 KHFILDECDK 163 (391)
T ss_dssp SEEEECSHHH
T ss_pred CEEEEeCHHH
Confidence 3699999996
No 272
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=23.84 E-value=28 Score=26.10 Aligned_cols=10 Identities=20% Similarity=0.564 Sum_probs=8.8
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 129 ~~vViDEah~ 138 (555)
T 3tbk_A 129 TLMIFDECHN 138 (555)
T ss_dssp SEEEETTGGG
T ss_pred CEEEEECccc
Confidence 4799999997
No 273
>3mnf_A PAC2 family protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.97A {Streptomyces avermitilis}
Probab=23.71 E-value=37 Score=23.84 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhcH-HHHHHHHHHHHHHHHHhhhhcCCC
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENL-LDRVQKTGDILLNVRLGLGQESNL 115 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~-~~~~~~~g~~l~~~L~~l~~~~p~ 115 (119)
..+|-+.++.+.+|..+-.-++ .+.+.+..+.++++++++.++.+.
T Consensus 189 ~pdP~AA~~lL~~l~~~~gl~v~~~~L~e~Ae~~e~~i~e~~~~~~e 235 (250)
T 3mnf_A 189 PPNPKATLALLNRLEDLIDVRIPLGELPEDARAWQVGVDQLAAEDSE 235 (250)
T ss_dssp SCCHHHHHHHHHHHHHHHTCCCCCTTHHHHHHHHHHHHTTCC--CCH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 4588888888888887753221 134666677778888877766654
No 274
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=23.40 E-value=29 Score=26.75 Aligned_cols=10 Identities=30% Similarity=0.428 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
.++|+||+|+
T Consensus 141 ~~vViDEaH~ 150 (523)
T 1oyw_A 141 VLLAVDEAHC 150 (523)
T ss_dssp EEEEESSGGG
T ss_pred CEEEEeCccc
Confidence 3799999997
No 275
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=23.21 E-value=22 Score=25.97 Aligned_cols=10 Identities=20% Similarity=0.581 Sum_probs=8.4
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 141 ~~iViDEaH~ 150 (414)
T 3oiy_A 141 DFVFVDDVDA 150 (414)
T ss_dssp SEEEESCHHH
T ss_pred cEEEEeChHh
Confidence 4789999984
No 276
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=23.11 E-value=21 Score=25.48 Aligned_cols=10 Identities=20% Similarity=0.541 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 164 ~~vIiDEah~ 173 (394)
T 1fuu_A 164 KMFILDEADE 173 (394)
T ss_dssp CEEEEETHHH
T ss_pred cEEEEEChHH
Confidence 4899999996
No 277
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=23.03 E-value=21 Score=25.67 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.7
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 165 ~~vIiDEaH~ 174 (400)
T 1s2m_A 165 SLFIMDEADK 174 (400)
T ss_dssp CEEEEESHHH
T ss_pred CEEEEeCchH
Confidence 5799999996
No 278
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=22.95 E-value=22 Score=25.68 Aligned_cols=10 Identities=30% Similarity=0.521 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 177 ~~iViDEah~ 186 (417)
T 2i4i_A 177 KYLVLDEADR 186 (417)
T ss_dssp CEEEESSHHH
T ss_pred cEEEEEChhH
Confidence 3699999996
No 279
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=22.48 E-value=23 Score=25.52 Aligned_cols=10 Identities=20% Similarity=0.508 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 185 ~~vViDEah~ 194 (414)
T 3eiq_A 185 KMFVLDEADE 194 (414)
T ss_dssp CEEEECSHHH
T ss_pred cEEEEECHHH
Confidence 4799999996
No 280
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=22.42 E-value=30 Score=26.03 Aligned_cols=10 Identities=20% Similarity=0.564 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 132 ~~vViDEah~ 141 (556)
T 4a2p_A 132 TLMIFDECHN 141 (556)
T ss_dssp SEEEEETGGG
T ss_pred CEEEEECCcc
Confidence 3799999997
No 281
>3kp1_E D-ornithine aminomutase S component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_E* 3koy_E* 3koz_E* 3kp0_E* 3kox_E*
Probab=22.06 E-value=34 Score=21.62 Aligned_cols=29 Identities=21% Similarity=0.428 Sum_probs=23.3
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHhhhhcC
Q psy4800 85 TIHNENLLDRVQKTGDILLNVRLGLGQES 113 (119)
Q Consensus 85 ~i~~~~~~~~~~~~g~~l~~~L~~l~~~~ 113 (119)
-+.++++.++.+++.+.+-+.+.++.+.|
T Consensus 16 ~l~d~el~~rar~LA~kIv~pv~el~~~h 44 (121)
T 3kp1_E 16 NLSDEELQTRFWEMAEKIVDPLLDLGKKN 44 (121)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34567788899999999999998887765
No 282
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=22.02 E-value=23 Score=25.47 Aligned_cols=10 Identities=20% Similarity=0.537 Sum_probs=8.5
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 170 ~~iViDEah~ 179 (412)
T 3fht_A 170 KVFVLDEADV 179 (412)
T ss_dssp CEEEEETHHH
T ss_pred cEEEEeCHHH
Confidence 4789999995
No 283
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=21.71 E-value=32 Score=27.09 Aligned_cols=10 Identities=40% Similarity=0.660 Sum_probs=8.8
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 138 ~lvViDEaH~ 147 (699)
T 4gl2_A 138 SLIIIDECHH 147 (699)
T ss_dssp SEEEEESGGG
T ss_pred cEEEEECccc
Confidence 4799999996
No 284
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=21.41 E-value=33 Score=25.79 Aligned_cols=9 Identities=44% Similarity=0.667 Sum_probs=8.1
Q ss_pred EEEEccccc
Q psy4800 9 ALLIDEVQT 17 (119)
Q Consensus 9 lli~DEv~t 17 (119)
++|+||+|.
T Consensus 152 ~vIvDEaH~ 160 (500)
T 1z63_A 152 YIVIDEAQN 160 (500)
T ss_dssp EEEEETGGG
T ss_pred EEEEeCccc
Confidence 689999997
No 285
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=21.09 E-value=25 Score=25.48 Aligned_cols=10 Identities=30% Similarity=0.574 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 181 ~~vViDEah~ 190 (410)
T 2j0s_A 181 KMLVLDEADE 190 (410)
T ss_dssp CEEEEETHHH
T ss_pred eEEEEccHHH
Confidence 4799999996
No 286
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=21.00 E-value=34 Score=25.79 Aligned_cols=10 Identities=20% Similarity=0.358 Sum_probs=8.6
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|.
T Consensus 227 ~liIiDE~H~ 236 (510)
T 2oca_A 227 GMMMNDECHL 236 (510)
T ss_dssp EEEEEETGGG
T ss_pred CEEEEECCcC
Confidence 3789999997
No 287
>4a15_A XPD helicase, ATP-dependent DNA helicase TA0057; hydrolase, nucleotide excision repair,; 2.20A {Thermoplasma acidophilum} PDB: 2vsf_A*
Probab=20.62 E-value=30 Score=27.49 Aligned_cols=11 Identities=18% Similarity=0.480 Sum_probs=9.3
Q ss_pred CCEEEEccccc
Q psy4800 7 GSALLIDEVQT 17 (119)
Q Consensus 7 ~~lli~DEv~t 17 (119)
+.++|+||+|.
T Consensus 205 ~~ivI~DEAHN 215 (620)
T 4a15_A 205 QIVIILDEAHN 215 (620)
T ss_dssp GEEEEETTGGG
T ss_pred CeEEEEECCCc
Confidence 56899999985
No 288
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=20.60 E-value=77 Score=23.78 Aligned_cols=32 Identities=41% Similarity=0.696 Sum_probs=19.1
Q ss_pred hhhCCEEEEc-cccccccCCCcchhhhhcCCCCCCCEEEEc
Q psy4800 4 KYHGSALLID-EVQTGGGPCGKFWCHEHFDLEESPDIVTFS 43 (119)
Q Consensus 4 ~~~~~lli~D-Ev~tG~Gr~G~~~~~~~~g~~~~pDi~t~g 43 (119)
+++.=++|+| |||+|=|. .+-+--+ |+++|+|
T Consensus 159 ~~~~RV~ivD~DvHHGnGt------q~iF~~d--~~Vl~~S 191 (376)
T 4a69_A 159 KYHPRVLYIDIDIHHGDGV------QEAFYLT--DRVMTVS 191 (376)
T ss_dssp TTCSCEEEEECSSSCCHHH------HHHTTTC--SSEEEEE
T ss_pred HhCCcEEEEeccCCCCcch------hhHhcCC--CCEEEEe
Confidence 3456678888 89987642 1222223 7777665
No 289
>2k6o_A Cathelicidin antimicrobial peptide; human HOST defense peptide, human cathelicidin, LL-37, bacterial membrane targeting, antibiotic; NMR {Homo sapiens} PDB: 2lmf_A
Probab=20.26 E-value=94 Score=15.32 Aligned_cols=23 Identities=9% Similarity=0.033 Sum_probs=17.9
Q ss_pred hcHHHHHHHHHHHHHHHHHhhhh
Q psy4800 89 ENLLDRVQKTGDILLNVRLGLGQ 111 (119)
Q Consensus 89 ~~~~~~~~~~g~~l~~~L~~l~~ 111 (119)
+.+-+.++++|+.+++.+.++..
T Consensus 11 eKig~~~kkIgQkIKdFf~~l~p 33 (37)
T 2k6o_A 11 EKIGKEFKRIVQRIKDFLRNLVP 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHhhCc
Confidence 45667788899999998888754
No 290
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=20.18 E-value=99 Score=22.68 Aligned_cols=43 Identities=14% Similarity=-0.022 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHHHHHhhhhc
Q psy4800 70 MGDPGKVLLLKGIIDTIHNENL---LDRVQKTGDILLNVRLGLGQE 112 (119)
Q Consensus 70 ~~~p~~~a~a~a~l~~i~~~~~---~~~~~~~g~~l~~~L~~l~~~ 112 (119)
..+|-+..+.+.+|..+..-++ .+.+.+..+.++++++++.++
T Consensus 211 ~p~P~AA~alL~~L~~~~gl~vp~~~~~L~e~Ae~~e~~i~el~~~ 256 (325)
T 3e35_A 211 SAYPDAALTVLEAITAATGLVLPGIAHSLRTDAHRTQTEIDRQIQE 256 (325)
T ss_dssp SCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 4578888888888877654222 345666666677777666554
No 291
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=20.04 E-value=36 Score=26.76 Aligned_cols=10 Identities=20% Similarity=0.564 Sum_probs=8.8
Q ss_pred CEEEEccccc
Q psy4800 8 SALLIDEVQT 17 (119)
Q Consensus 8 ~lli~DEv~t 17 (119)
-++|+||+|+
T Consensus 138 ~~vViDEaH~ 147 (696)
T 2ykg_A 138 TLMIFDECHN 147 (696)
T ss_dssp SEEEEETGGG
T ss_pred cEEEEeCCCc
Confidence 4799999997
No 292
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=20.04 E-value=62 Score=23.99 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=18.1
Q ss_pred CCEEEEc-cccccccCCCcchhhhhcCCCCCCCEEEEc
Q psy4800 7 GSALLID-EVQTGGGPCGKFWCHEHFDLEESPDIVTFS 43 (119)
Q Consensus 7 ~~lli~D-Ev~tG~Gr~G~~~~~~~~g~~~~pDi~t~g 43 (119)
.=++|+| |||+|=|. .+-+--+ |+++++|
T Consensus 187 ~RV~ivD~DvHHGnGt------q~iF~~d--~~Vl~~S 216 (341)
T 3q9b_A 187 KKIAILDVDFHHGNGT------QDIFYER--GDVFFAS 216 (341)
T ss_dssp SCEEEEECSSSCCHHH------HHHHTTC--TTEEEEE
T ss_pred CeEEEEecCCCCCcch------hHHhcCC--CCEEEEe
Confidence 4678888 99987642 1222223 8888765
Done!