BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4801
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q962Q7|RS23_SPOFR 40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2
SV=1
Length = 143
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/143 (96%), Positives = 142/143 (99%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKPRGIRTARKHVN+RR QRWADKDYKKAH+GTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKK+TAFVPRDGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYKEKKERPRS
Sbjct: 121 KVVKVANVSLLALYKEKKERPRS 143
>sp|Q6EV23|RS23_PAPDA 40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1
Length = 143
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/143 (96%), Positives = 142/143 (99%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKPRGIRTARKHVN+RR QRWADKDYKKAH+GTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKK+TAFVPRDGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYKEKKERPRS
Sbjct: 121 KVVKVANVSLLALYKEKKERPRS 143
>sp|Q8T3U2|RS23_DROME 40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2
SV=1
Length = 143
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/143 (97%), Positives = 141/143 (98%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKPRG+RTARKHVN+RR QRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVPRDG LNYIEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYKEKKERPRS
Sbjct: 121 KVVKVANVSLLALYKEKKERPRS 143
>sp|Q86FP7|RS23_DERVA 40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2
SV=1
Length = 143
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/143 (95%), Positives = 140/143 (97%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKPRG+RTARKH ++RR QRW DKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYKEKKERPRS
Sbjct: 121 KVVKVANVSLLALYKEKKERPRS 143
>sp|Q9GRJ3|RS23_LUMRU 40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1
Length = 143
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/143 (92%), Positives = 139/143 (97%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKPRG+RTARK N+RR QRW DKDYKK+HLGTRWK+NPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVA+VSLLALYK+KKERPRS
Sbjct: 121 KVVKVASVSLLALYKQKKERPRS 143
>sp|P90707|RS23_BRUMA 40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1
Length = 143
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 132/143 (92%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKP+GIR ARK +R+ QRW DK YKKAHLGTRWKANPFG ASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWKANPFGTASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
K+VKVAN SL+AL+K KKERPRS
Sbjct: 121 KIVKVANTSLIALFKGKKERPRS 143
>sp|Q90YQ1|RS23_ICTPU 40S ribosomal protein S23 OS=Ictalurus punctatus GN=rps23 PE=2 SV=1
Length = 143
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRDHRREQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|P62268|RS23_RAT 40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=1 SV=3
Length = 143
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|P62267|RS23_MOUSE 40S ribosomal protein S23 OS=Mus musculus GN=Rps23 PE=2 SV=3
Length = 143
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|P62266|RS23_HUMAN 40S ribosomal protein S23 OS=Homo sapiens GN=RPS23 PE=1 SV=3
Length = 143
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|P62298|RS23_CHILA 40S ribosomal protein S23 OS=Chinchilla lanigera GN=RPS23 PE=2 SV=1
Length = 143
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|Q3T199|RS23_BOVIN 40S ribosomal protein S23 OS=Bos taurus GN=RPS23 PE=2 SV=1
Length = 143
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 133/143 (93%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR Q+W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|Q6SA96|RS23_PIG 40S ribosomal protein S23 OS=Sus scrofa GN=RPS23 PE=2 SV=3
Length = 143
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/143 (88%), Positives = 132/143 (92%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK ++RR +W DK YKKAHLGT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDHKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>sp|Q19877|RS23_CAEEL 40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=3
SV=1
Length = 143
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/143 (83%), Positives = 132/143 (92%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKP+G+ TARK +R+ QRW DK YKKAH+GTRWK+NPFGGASHAKGIVLEK+GVEAK
Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN++EENDEVLV+GFGR GHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
K+VKVAN SL+AL+K KKERPRS
Sbjct: 121 KIVKVANTSLIALFKGKKERPRS 143
>sp|Q8I7D5|RS23_CIOIN 40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1
Length = 143
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 127/143 (88%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKP G+R ARK N RR Q+W D YKK+HLGT KANPFGGASHAKGIVLEK+GVEAK
Sbjct: 1 MGKPSGLRCARKLXNRRRDQKWHDXXYKKSHLGTALKANPFGGASHAKGIVLEKIGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLNYIEENDEVLVAGFGR GHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLVAGFGRSGHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
K+VKVANVSL AL+ KKERPRS
Sbjct: 121 KIVKVANVSLHALFTGKKERPRS 143
>sp|Q9DFR4|RS23_GILMI 40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2
SV=1
Length = 143
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/143 (85%), Positives = 129/143 (90%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+RTARK N+RR Q+W DK YKKAHLGT KANPFG ASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRNHRREQKWHDKQYKKAHLGTALKANPFGSASHAKGIVLEKVGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKKITAFVP DGCLN+ EENDEVLVAGFGRK HAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFXEENDEVLVAGFGRKXHAVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVV++ANVSLLALYK KERP+S
Sbjct: 121 KVVEMANVSLLALYKGXKERPKS 143
>sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1
Length = 142
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+ ARK N+RR QRWADK YKK+HLG WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKC RVQLIKNGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 120 KVVKVSGVSLLALFKEKKEKPRS 142
>sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1
Length = 142
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/143 (80%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK G+ ARK ++RR QRWADK YKK+HLG WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKC RVQLIKNGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 120 KVVKVSGVSLLALFKEKKEKPRS 142
>sp|Q9HE74|RS23_NEUCR 40S ribosomal protein S23 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-23
PE=3 SV=1
Length = 145
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/142 (79%), Positives = 127/142 (89%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ ARK NNRR QRW+D YKK LGT +K++PFGG+SHAKGIVLEKVGVEAKQ
Sbjct: 4 GKPRGLNAARKLRNNRREQRWSDLHYKKRALGTAFKSSPFGGSSHAKGIVLEKVGVEAKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ V LLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVGLLALWKEKKEKPRS 145
>sp|Q873W8|RS23_ASPFU 40S ribosomal protein S23 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rps23
PE=2 SV=1
Length = 145
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 127/142 (89%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ ARK N+RR QRWAD YKK LGT +K++PFGGASHAKGIVLEKVGVEAKQ
Sbjct: 4 GKPRGLNAARKLSNHRREQRWADLHYKKRLLGTAFKSSPFGGASHAKGIVLEKVGVEAKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCV+VQLIKNGKK+TAFVP DGCLN+I+ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ V LLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVGLLALWKEKKEKPRS 145
>sp|P49201|RS232_ARATH 40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2
SV=2
Length = 142
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/143 (79%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+ RK R QRWADK YKK+HLG WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKC RVQLIKNGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 120 KVVKVSGVSLLALFKEKKEKPRS 142
>sp|Q55A19|RS23_DICDI 40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3
SV=1
Length = 143
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 125/141 (88%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKP G++TARK N+RRVQRW DK YKKAH GT KANPFGGASHA GIV+ ++G+EAK
Sbjct: 1 MGKPNGLKTARKLRNHRRVQRWNDKLYKKAHFGTALKANPFGGASHASGIVVSRLGIEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQL KNGKKITAFVP DGCLNYI+END+VLVAG GR GH+VGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERP 141
KVVKV++VSL+A+Y+ K++P
Sbjct: 121 KVVKVSSVSLIAIYRGIKDKP 141
>sp|Q6YIA3|RS23_SACBA 40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3
SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|Q6FLA8|RS23_CANGA 40S ribosomal protein S23 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS23
PE=3 SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|P0CX30|RS23B_YEAST 40S ribosomal protein S23-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS23B PE=1 SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|P0CY40|RS23B_NAUCC 40S ribosomal protein S23-B OS=Naumovozyma castellii (strain ATCC
76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=RPS23B
PE=3 SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|P0CX29|RS23A_YEAST 40S ribosomal protein S23-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS23A PE=1 SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|P0CY39|RS23A_NAUCC 40S ribosomal protein S23-A OS=Naumovozyma castellii (strain ATCC
76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=RPS23A
PE=3 SV=1
Length = 145
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 GKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
GKPRG+ +ARK +RR RWA+ +YKK LGT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 122 VVKVANVSLLALYKEKKERPRS 143
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>sp|Q9SF35|RS231_ARATH 40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2
SV=2
Length = 142
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/143 (77%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGK RG+ RK R QRWADK YKK++ G WK PF +SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWK-KPFACSSHAKGIVLEKIGIEAK 59
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKC RVQLIKNGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 120 KVVKVSGVSLLALFKEKKEKPRS 142
>sp|P79057|RS23_SCHPO 40S ribosomal protein S23 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps23a PE=2 SV=2
Length = 143
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/143 (74%), Positives = 125/143 (87%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
MGKP G+ ARK N+RR +RWAD YKK LGT +K++PFGG+SHAKGIV+EK+GVEAK
Sbjct: 1 MGKPAGLNAARKLRNHRREERWADAHYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAK 60
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN+++ENDEVL++GFGRKG A GDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRF 120
Query: 121 KVVKVANVSLLALYKEKKERPRS 143
KVVKVA V L AL+ EKKE+PR+
Sbjct: 121 KVVKVAGVGLSALFHEKKEKPRA 143
>sp|P06147|RS12_TETTH 40S ribosomal protein S12 OS=Tetrahymena thermophila PE=1 SV=1
Length = 142
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 116/140 (82%), Gaps = 1/140 (0%)
Query: 1 MGKPRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
+GKPRGIR RK +R+ QRWAD D+ K LG+RW+ NPF GASHAKG+V EK+G+E+K
Sbjct: 3 VGKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWR-NPFMGASHAKGLVTEKIGIESK 61
Query: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRF 120
QPNSA+RKCVRV L KN KKI AFVP DGCLN++ ENDEVLVAG GR+GHAVGDIPGVRF
Sbjct: 62 QPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRF 121
Query: 121 KVVKVANVSLLALYKEKKER 140
KVV V +SLLAL+K KKE+
Sbjct: 122 KVVCVKGISLLALFKGKKEK 141
>sp|Q8SR65|RS23_ENCCU 40S ribosomal protein S23 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS23 PE=1 SV=1
Length = 140
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 102/136 (75%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ +A + +R+ +R AD Y+K LGT++K + G A AK IVLEK+GVEAKQPNSA
Sbjct: 3 GLFSANNLIKSRKAKRLADTAYRKRALGTKYKHSVLGRAPQAKAIVLEKIGVEAKQPNSA 62
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKV 125
IRK VR QLI GKKITAFVP DG + YIE NDEV V GFG+KG +VGDIPG+RFKV KV
Sbjct: 63 IRKAVRCQLIATGKKITAFVPYDGSVTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKV 122
Query: 126 ANVSLLALYKEKKERP 141
NVSL A++ KKE+P
Sbjct: 123 QNVSLHAIFTGKKEKP 138
>sp|A0RUR2|RS12_CENSY 30S ribosomal protein S12 OS=Cenarchaeum symbiosum (strain A)
GN=rps12 PE=3 SV=1
Length = 145
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P G+ R ++ QRW+ YK+ LG KANP GG+ A+GIVLEKVGVEAKQPN
Sbjct: 5 PLGLFAGRVLKAKKKRQRWSISRYKRRELGLDRKANPMGGSPQARGIVLEKVGVEAKQPN 64
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFG-RKGHAVGDIPGVRFKV 122
SA+RKCVRVQLIKNGK ITAF+PRDG +N+I+E+DEV V G G +G A+GDIPGVRFKV
Sbjct: 65 SAVRKCVRVQLIKNGKSITAFLPRDGAMNFIDEHDEVHVEGMGATQGGAMGDIPGVRFKV 124
Query: 123 VKVANVSLLALYKEKKERPR 142
KV SL L KKE+PR
Sbjct: 125 FKVNGTSLHELVIGKKEKPR 144
>sp|A0B562|RS12_METTP 30S ribosomal protein S12 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps12 PE=3 SV=2
Length = 142
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P GI ARK ++ + RW+D Y + LG + KA+P GGA A+GIVLEKVGVEAKQPN
Sbjct: 2 PMGINAARKMEDDWKKLRWSDPHYCRRALGLKVKADPLGGAPRARGIVLEKVGVEAKQPN 61
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SAIRKCVR+QLIKNG+++TAF P DG + +I+E+DEV+V GR G ++GDIPGVRFKV
Sbjct: 62 SAIRKCVRIQLIKNGRQVTAFCPGDGAIGFIDEHDEVVVERIGGRMGRSMGDIPGVRFKV 121
Query: 123 VKVANVSLLALYKEKKERP 141
V V NVSL + +KE+P
Sbjct: 122 VAVNNVSLEEMVSGRKEKP 140
>sp|Q0W8G5|RS12_UNCMA 30S ribosomal protein S12 OS=Uncultured methanogenic archaeon RC-I
GN=rps12 PE=3 SV=1
Length = 142
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Query: 9 TARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRK 68
RK V++R++ RW+D+DY + L KA+P GA AKGIVLEKVGVEAKQPNSAIRK
Sbjct: 7 ACRKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRK 66
Query: 69 CVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 127
C+R+QLIKNG++ITAF P DG +N+I+E+DEV + G GR G + GDIPGVRF+V KV +
Sbjct: 67 CIRIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVND 126
Query: 128 VSLLALYKEKKERP 141
VSL + K+++P
Sbjct: 127 VSLEEMVAGKRDKP 140
>sp|Q8TXJ2|RS12_METKA 30S ribosomal protein S12 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps12 PE=3 SV=1
Length = 147
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P G ARK R+ RW D+ YK+ L KA+P GA A+GIVLEKVGVEAKQPN
Sbjct: 7 PAGEFAARKLREKRKKFRWKDERYKRRMLKLDEKADPLEGAPQARGIVLEKVGVEAKQPN 66
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SAIRKCVRVQLIKNGK++TAF P DG ++YI+E+DEV++ G G KG A GDIPGVR+KV
Sbjct: 67 SAIRKCVRVQLIKNGKQVTAFCPGDGAIDYIDEHDEVVIEGIGGPKGRAKGDIPGVRYKV 126
Query: 123 VKVANVSLLALYKEKKERP 141
VKV +V+L L K K E+P
Sbjct: 127 VKVNDVALSELLKGKIEKP 145
>sp|Q6L0R4|RS12_PICTO 30S ribosomal protein S12 OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps12
PE=3 SV=1
Length = 142
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ +K + +R+ RW+D+DYK+ L + K++P GA AKGIV+EKVG+EAKQPNS
Sbjct: 4 GLNAGKKLMKSRKTYRWSDRDYKRRVLNLKKKSDPLEGAPQAKGIVIEKVGIEAKQPNSG 63
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCV++QLIKNG++++AF P DG +NYI+E+DEV+V G GR G + GDIPGVR+KV+K
Sbjct: 64 IRKCVKIQLIKNGRQLSAFAPGDGAINYIDEHDEVVVEGIGGRMGRSKGDIPGVRYKVIK 123
Query: 125 VANVSLLALYKEKKER 140
V +SL L K +KE+
Sbjct: 124 VNGISLHELVKGRKEK 139
>sp|O28387|RS12_ARCFU 30S ribosomal protein S12 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps12 PE=3 SV=2
Length = 142
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Query: 5 RGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNS 64
RG+ ARK + NR+ RW+D+ + + LG KA+P GA A+GIVLEK+G+EA+QPNS
Sbjct: 3 RGLFAARKLMENRKKFRWSDRRFVRRTLGLAAKADPLEGAPMARGIVLEKIGIEARQPNS 62
Query: 65 AIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVV 123
AIRK VRVQLIKNG++ITAF P DG +N+I+E+DEV+V GR G ++GDIPGVR+KVV
Sbjct: 63 AIRKAVRVQLIKNGRQITAFCPGDGAINFIDEHDEVIVEKIGGRMGRSMGDIPGVRYKVV 122
Query: 124 KVANVSLLALYKEKKER 140
KV N SL L + +KE+
Sbjct: 123 KVNNTSLRELVRGRKEK 139
>sp|Q2NEK8|RS12_METST 30S ribosomal protein S12 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps12 PE=3 SV=1
Length = 141
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ A+K +NR+ RW D YK+ LG KA+P G+ A+GIV+EKVG+EAKQPNSA
Sbjct: 3 GLFAAKKLKDNRQNFRWKDTQYKRKTLGLNIKADPLEGSPQARGIVIEKVGIEAKQPNSA 62
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCVRVQLIKNGK+ITAF P DG + +I+E+DEV++ G G G ++GDIPGVR+KV K
Sbjct: 63 IRKCVRVQLIKNGKQITAFAPGDGAIGFIDEHDEVMIEGIGGPSGRSMGDIPGVRWKVTK 122
Query: 125 VANVSLLALYKEKKERP 141
V NV+L + K E+P
Sbjct: 123 VNNVALSEMVSGKIEKP 139
>sp|Q9HLY2|RS12_THEAC 30S ribosomal protein S12 OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps12 PE=3 SV=1
Length = 142
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
GI RK + NR+ RW+D+DYK+ L + K++P GA AKGI +EKVG+EAKQPNSA
Sbjct: 4 GINAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSA 63
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCV+VQLIKNG++ITAF DG +NYI+E+DEV V G GR G + GDIPGVR+KVV
Sbjct: 64 IRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVA 123
Query: 125 VANVSLLALYKEKKER 140
V +SL L K +KE+
Sbjct: 124 VNGISLKELVKGRKEK 139
>sp|A3DMP8|RS12_STAMF 30S ribosomal protein S12 OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps12 PE=3 SV=1
Length = 147
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P G+ ARK R RW+ +++K LG + K +P GA A+GIVLEKVGVEA+QPN
Sbjct: 7 PNGLFAARKLRRKRLKFRWSQREFKIKMLGLKKKHDPLEGAPMARGIVLEKVGVEARQPN 66
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SA+RKCVRVQL KNGK +TAFVP DG +NYI+E+DEV++ G G +G ++GDIPGVR+KV
Sbjct: 67 SAVRKCVRVQLAKNGKVVTAFVPFDGGINYIDEHDEVIIEGIGGPRGRSMGDIPGVRYKV 126
Query: 123 VKVANVSLLALYKEKKERP 141
+ V VSL ALY KK++P
Sbjct: 127 IMVNGVSLKALYLGKKQKP 145
>sp|Q97CD8|RS12_THEVO 30S ribosomal protein S12 OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps12 PE=3 SV=1
Length = 142
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ RK + NR+ RW+D+DYK+ L + K++P GA AKGI +EKVG+EAKQPNSA
Sbjct: 4 GLNAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSA 63
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCV+VQLIKNG++ITAF DG +NYI+E+DEV V G GR G + GDIPGVR+KVV
Sbjct: 64 IRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVA 123
Query: 125 VANVSLLALYKEKKER 140
V +SL L K +KE+
Sbjct: 124 VNGISLKELVKGRKEK 139
>sp|Q8TRC1|RS12_METAC 30S ribosomal protein S12 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps12 PE=3
SV=1
Length = 142
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 16 NRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 75
R+ RW D Y + LG KA+P GGA +GIVLEKVGVEAKQPNSAIRKCVRVQLI
Sbjct: 14 TRKDARWKDTYYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRVQLI 73
Query: 76 KNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALY 134
KNG+++TAF P DG +N+I+E+DEV V GR G A+GDIPGVRFKV+ V NVSL L
Sbjct: 74 KNGRQVTAFCPGDGAVNFIDEHDEVTVEKIGGRMGGAMGDIPGVRFKVIAVNNVSLNQLV 133
Query: 135 KEKKERPR 142
+ E+PR
Sbjct: 134 IGRMEKPR 141
>sp|Q12WT0|RS12_METBU 30S ribosomal protein S12 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps12 PE=3 SV=1
Length = 142
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P G A + R+ RW D Y + LG K++P GA +GIVLEKVGVEAKQPN
Sbjct: 2 PNGKYAAHRLQQVRKDARWKDTGYSRRTLGLDIKSDPLSGAPQGRGIVLEKVGVEAKQPN 61
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SAIRKCVR+QLIKNG++ TAF P DG +N+I+E+DEV V GR G A+GDIPGVRFKV
Sbjct: 62 SAIRKCVRIQLIKNGRQATAFCPGDGAINFIDEHDEVTVERIGGRMGGAMGDIPGVRFKV 121
Query: 123 VKVANVSLLALYKEKKERPR 142
+ V NVSL + +KE+PR
Sbjct: 122 IAVNNVSLREMVIGRKEKPR 141
>sp|Q8PUR5|RS12_METMA 30S ribosomal protein S12 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps12 PE=3 SV=1
Length = 142
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 16 NRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 75
R+ RW D Y + LG KA+P GGA +GIVLEKVGVEAKQPNSAIRKCVR+QLI
Sbjct: 14 TRKDARWKDTYYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRIQLI 73
Query: 76 KNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALY 134
KNG+++TAF P DG +N+I+E+DEV V GR G A+GDIPGVRFKV+ V NVSL L
Sbjct: 74 KNGRQVTAFCPGDGAVNFIDEHDEVTVERIGGRMGGAMGDIPGVRFKVIAVNNVSLNQLV 133
Query: 135 KEKKERPR 142
+ E+PR
Sbjct: 134 IGRLEKPR 141
>sp|P39573|RS12_SULSO 30S ribosomal protein S12 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps12 PE=3 SV=2
Length = 147
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P+GI ARK R R + + YK L + K +P GGA A+GIVLEKVG+E++QPN
Sbjct: 7 PKGIYAARKLRLKRLKFRRSQRKYKTKILKLKEKYDPLGGAPMARGIVLEKVGIESRQPN 66
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SA+RKCVRVQL++NG+ +TAFVP DG +N+I+E+DEV++ G G G ++GD+PGVR+KV
Sbjct: 67 SAVRKCVRVQLVRNGRVVTAFVPGDGGVNFIDEHDEVIITGIGGTLGRSMGDLPGVRYKV 126
Query: 123 VKVANVSLLALYKEKKERP 141
+ V VSL ALYK KK++P
Sbjct: 127 IMVNGVSLDALYKGKKQKP 145
>sp|A5ULM8|RS12_METS3 30S ribosomal protein S12 OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rps12 PE=3 SV=1
Length = 141
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ A+K NR+ +W D DYK+ L KA+P GA A+GIV+EKVG+EAKQPNSA
Sbjct: 3 GLFAAKKLKKNRQNFKWKDVDYKRKALRLDVKADPLEGAPQARGIVIEKVGIEAKQPNSA 62
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCVRVQLIKNGK++TAF P DG + +I+E+DEV++ G G G ++GDIPGVR+KV K
Sbjct: 63 IRKCVRVQLIKNGKQLTAFAPGDGAIGFIDEHDEVMIEGIGGPSGRSMGDIPGVRWKVSK 122
Query: 125 VANVSLLALYKEKKERP 141
V NV+L + K E+P
Sbjct: 123 VNNVALSEMVSGKIEKP 139
>sp|O27129|RS12_METTH 30S ribosomal protein S12 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps12 PE=3 SV=1
Length = 141
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Query: 6 GIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
G+ A+K + R+ +W D YK+ L KA+P GA A+GIV+EKVG+EAKQPNSA
Sbjct: 3 GLFAAKKLKSKRQKFKWKDTHYKRRSLRLDVKADPLEGAPQARGIVIEKVGIEAKQPNSA 62
Query: 66 IRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVK 124
IRKCVRVQLIKNGK+ITAF P DG + +I+E+DEV+V G G G ++GDIPGVR+KV K
Sbjct: 63 IRKCVRVQLIKNGKQITAFAPGDGAIGFIDEHDEVVVEGIGGPSGRSMGDIPGVRWKVTK 122
Query: 125 VANVSLLALYKEKKERP 141
V NVSL + K K E+P
Sbjct: 123 VNNVSLQEMVKGKIEKP 139
>sp|Q464Z1|RS12_METBF 30S ribosomal protein S12 OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps12 PE=3 SV=1
Length = 142
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 16 NRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 75
R+ RW D Y + LG KA+P GGA +GIVLEKVGVEAKQPNSAIRKCVR+QLI
Sbjct: 14 TRKNARWKDTSYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRIQLI 73
Query: 76 KNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALY 134
KNG+++TAF P DG +N+I+E+DEV V GR G A+GDIPGVRF+V V NVSL +
Sbjct: 74 KNGRQVTAFCPGDGAVNFIDEHDEVTVERIGGRMGGAMGDIPGVRFRVTAVNNVSLNQMV 133
Query: 135 KEKKERPR 142
+ E+PR
Sbjct: 134 IGRLEKPR 141
>sp|P11524|RS12_SULAC 30S ribosomal protein S12 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps12 PE=3 SV=3
Length = 147
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
Query: 4 PRGIRTARKHVNNRRVQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
P+G+ ARK R W+ + +K+ L + K +P GA A+GIVLEKVG+E++QPN
Sbjct: 7 PKGLFAARKLRLKRLKFSWSQRSFKRRMLALKEKFDPLEGAPMARGIVLEKVGIESRQPN 66
Query: 64 SAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 122
SA+RK VRVQL+KNG+ +TAFVP DG +N+I+E+DEV++AG G G ++GD+PGVR+KV
Sbjct: 67 SAVRKAVRVQLVKNGRIVTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKV 126
Query: 123 VKVANVSLLALYKEKKERP 141
V V VSL ALYK KK++P
Sbjct: 127 VMVNGVSLDALYKGKKQKP 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,430,600
Number of Sequences: 539616
Number of extensions: 2261475
Number of successful extensions: 7093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 913
Number of HSP's that attempted gapping in prelim test: 5957
Number of HSP's gapped (non-prelim): 1044
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)