RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4802
         (103 letters)



>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella
           thermoacetica [TaxId: 1525]}
          Length = 549

 Score = 59.1 bits (143), Expect = 3e-12
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 34  MEKFFNIKCRTSGKIPDAVVLVTTVRALKMHGGGP 68
            EKF+++KCR +G  PDA V+V TVRALKMHGG P
Sbjct: 304 AEKFYDVKCRYAGFKPDATVIVATVRALKMHGGVP 338


>d1knwa1 b.49.2.3 (A:2-31,A:279-422) Diaminopimelate decarboxylase
          LysA {Escherichia coli [TaxId: 562]}
          Length = 174

 Score = 23.0 bits (49), Expect = 7.8
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 23 GHLWPSKYWLWMEKFFNIKCRTSGKIPDAVVLVTTVRALKMHGG 66
            L+ +   L  E    +     G      VL+T VR++K  G 
Sbjct: 2  HSLFSTDTDLTAENLLRLPAE-FGCPVWVYVLITQVRSVKQMGS 44


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.136    0.437 

Gapped
Lambda     K      H
   0.267   0.0641    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 384,931
Number of extensions: 15014
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 4
Length of query: 103
Length of database: 2,407,596
Length adjustment: 64
Effective length of query: 39
Effective length of database: 1,528,876
Effective search space: 59626164
Effective search space used: 59626164
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.1 bits)