BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4803
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit R2
Length = 332
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 144/237 (60%), Gaps = 32/237 (13%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLIDTYIKD +ER ++ + +A +G E+T+ + ++ + +
Sbjct: 120 SLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVV--AFAAVEGI 177
Query: 67 FSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMC--------GLHCEF 118
F FSG +I L P GL GLHC+F
Sbjct: 178 F------------------FSG----SFASIFWLKKRGPMPGLTFSNELISRDEGLHCDF 215
Query: 119 ACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLL 178
ACLMFKHLV+KPSEER++ I+++AV +EQEFLTEALPVKLIGMNC LMKQYIE+VADRL+
Sbjct: 216 ACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 275
Query: 179 VDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDEQF 235
++LG SK + ENPFDFMENISLEGKTNFFE++VGEYQ+ VM+ F LD F
Sbjct: 276 LELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFTLDADF 332
>pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
Length = 351
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 108/123 (87%)
Query: 113 GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEY 172
GLHC+FACLMF++LVNKPSEER++ I++DAV +EQEFLTEALPV LIGMNC LMKQYIE+
Sbjct: 229 GLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEF 288
Query: 173 VADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLD 232
VADRLLV+LG SK + AENPFDFMENISLEGKTNFFE++V EYQ+ +VMA+ + VF LD
Sbjct: 289 VADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLD 348
Query: 233 EQF 235
F
Sbjct: 349 ADF 351
>pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Oxidizing Conditions. A Fully Occupied
Dinuclear Iron Cluster.
pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Reducing Conditions. A Fully Occupied
Dinuclear Iron Cluster And Bound Acetate.
pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
Length = 390
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 146/238 (61%), Gaps = 34/238 (14%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLIDTYIKD +ER ++ + +A +G E+T+ + ++ + +
Sbjct: 178 SLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVV--AFAAVEGI 235
Query: 67 FSQYYTLTGHELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMC--GLHCE 117
F FSG K GL+ +N LI GLHC+
Sbjct: 236 F------------------FSGSFASIFWLKKRGLMPGLTFSN-----ELISRDEGLHCD 272
Query: 118 FACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRL 177
FACLMFKHLV+KP+E+R++ I+ +AV +EQEFLTEALPVKLIGMNC LMKQYIE+VADRL
Sbjct: 273 FACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRL 332
Query: 178 LVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDEQF 235
+++LG +K + ENPFDFMENISLEGKTNFFE++VGEYQ+ VM++ F LD F
Sbjct: 333 MLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFTLDADF 390
>pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
Length = 326
Score = 164 bits (414), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 87/94 (92%)
Query: 113 GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEY 172
GLHC+FACLMF++LVNKPSEER++ I++DAV +EQEFLTEALPV LIGMNC LMKQYIE+
Sbjct: 233 GLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEF 292
Query: 173 VADRLLVDLGCSKHYFAENPFDFMENISLEGKTN 206
VADRLLV+LG SK + AENPFDFMENISLEGKTN
Sbjct: 293 VADRLLVELGFSKVFQAENPFDFMENISLEGKTN 326
>pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
Length = 399
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 129/245 (52%), Gaps = 45/245 (18%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLIDTYIKD +E ++ + +A + ++ F L ++ + V
Sbjct: 184 SLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLV--AFASIEGV 241
Query: 67 FSQYYTLTGHELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGL---IMC---G 113
F FSG K G++ PG ++C G
Sbjct: 242 F------------------FSGSFASIFWLKKRGMM---------PGLTFSNELICRDEG 274
Query: 114 LHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYV 173
LH +FACL+F HL NKP ++ IV +AV +EQ + +ALPV L+GMN DLM QY+E+V
Sbjct: 275 LHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEFV 334
Query: 174 ADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQ---VFR 230
ADRLLV G K+Y ENPFDFMENISL GKTNFFE++V +YQK+ VM+ Q F
Sbjct: 335 ADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQEAGAFT 394
Query: 231 LDEQF 235
+E F
Sbjct: 395 FNEDF 399
>pdb|4DJN|A Chain A, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
pdb|4DJN|B Chain B, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
Length = 311
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 83/94 (88%)
Query: 113 GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEY 172
GLHC+FACL F++LVNKPSEER++ I++DAV +EQEFLTEALPV LIG NC L KQYIE+
Sbjct: 218 GLHCDFACLXFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGXNCILXKQYIEF 277
Query: 173 VADRLLVDLGCSKHYFAENPFDFMENISLEGKTN 206
VADRLLV+LG SK + AENPFDF ENISLEGKTN
Sbjct: 278 VADRLLVELGFSKVFQAENPFDFXENISLEGKTN 311
>pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 39/242 (16%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLIDTYIKD +E ++ + +A + ++ F L ++ + V
Sbjct: 204 SLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLV--AFASIEGV 261
Query: 67 FSQYYTLTGHELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMC---GLHC 116
F FSG K G++ +N ++C GLH
Sbjct: 262 F------------------FSGSFASIFWLKKRGMMPGLTFSNE------LICRDEGLHT 297
Query: 117 EFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADR 176
+FACL+F HL NKP ++ IV +AV +EQ + +ALPV L+GMN DLM QY+E+VADR
Sbjct: 298 DFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEFVADR 357
Query: 177 LLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQ---VFRLDE 233
LLV G K+Y ENPFDFMENISL GKTNFFE++V +YQK+ VM+ Q F +E
Sbjct: 358 LLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQEAGAFTFNE 417
Query: 234 QF 235
F
Sbjct: 418 DF 419
>pdb|3OLJ|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
pdb|3OLJ|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
pdb|3OLJ|C Chain C, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
pdb|3OLJ|D Chain D, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
Length = 286
Score = 146 bits (369), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 117/193 (60%), Gaps = 22/193 (11%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQ---L 63
SLLIDTYIKD +ER ++ + +A +G E+T+ + + +
Sbjct: 113 SLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFF 172
Query: 64 AEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMCGLHCEFACLMF 123
+ F+ + L L G FS + LI+ GLHC+FACLMF
Sbjct: 173 SGSFASIFWLKKRGL--MPGLTFSNE----LISRDE-------------GLHCDFACLMF 213
Query: 124 KHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGC 183
KHLV+KPSEER++ I+++AV +EQEFLTEALPVKLIGMNC LMKQYIE+VADRL+++LG
Sbjct: 214 KHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGF 273
Query: 184 SKHYFAENPFDFM 196
SK + ENPFDFM
Sbjct: 274 SKVFRVENPFDFM 286
>pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
Length = 349
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 128/237 (54%), Gaps = 33/237 (13%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLID YIKD++ER+ ++ ++ +A + D ++F + + +
Sbjct: 138 SLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWIN-DTNSFAERIVANACVE---- 192
Query: 67 FSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMC--------GLHCEF 118
G FSG AI GL GLH +F
Sbjct: 193 ----------------GILFSG----SFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDF 232
Query: 119 ACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLL 178
CL++ L NK E +++IV +AV VE+ F+ E+LP LIGMN LM QYIE+VADRLL
Sbjct: 233 NCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLL 292
Query: 179 VDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDEQF 235
LGCSK + ++NPF++M+ ISL+GKTNFFE++V +YQKS VMA + QVF L+ F
Sbjct: 293 ECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFSLNTDF 349
>pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
Length = 345
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 85/131 (64%), Gaps = 8/131 (6%)
Query: 100 LTNYKPGFGLIMC--------GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLT 151
LT+ K GL M G + +F+CL+F HL KP+ + I+ I+ +AV +E+E+ +
Sbjct: 200 LTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYS 259
Query: 152 EALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERK 211
+LPV+ GM+ + YIE+VAD LL G K+Y A NPF+FME+++ GKT FFE+K
Sbjct: 260 NSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKK 319
Query: 212 VGEYQKSSVMA 222
V +YQK+S M+
Sbjct: 320 VSDYQKASDMS 330
>pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
Length = 311
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 98/199 (49%), Gaps = 33/199 (16%)
Query: 7 SLLIDTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEV 66
SLLID YIKD++ERM ++ ++ +A + D ++F + + +
Sbjct: 137 SLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWIN-DTNSFAERIVANACVE---- 191
Query: 67 FSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMC--------GLHCEF 118
G FSG AI GL GLH +F
Sbjct: 192 ----------------GILFSG----SFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDF 231
Query: 119 ACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLL 178
CL++ L NK EE +++IV +AV VE+ F+ E+LP LIGMN LM QYIE+VADRLL
Sbjct: 232 NCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLL 291
Query: 179 VDLGCSKHYFAENPFDFME 197
LG K + A+NPF++M+
Sbjct: 292 ECLGSPKIFHAKNPFNWMD 310
>pdb|1DM5|A Chain A, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|B Chain B, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|C Chain C, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|D Chain D, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|E Chain E, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|F Chain F, Annexin Xii E105k Homohexamer Crystal Structure
Length = 315
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GE +GTDES FNA+L TRSYPQL ++F +Y ++ + +AI EFSGDIK GL+AI
Sbjct: 180 GEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAI 237
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ +GTDE + IL TRS Q ++ + Y TL G L++ + E SG+ + +A+
Sbjct: 22 RKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALAL 81
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTD++ ILCT+S Q+ + + + L +L++ I E SG+ + L+++
Sbjct: 100 LGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSM 153
>pdb|1AEI|A Chain A, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|B Chain B, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|C Chain C, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|D Chain D, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|E Chain E, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|F Chain F, Crystal Structure Of The Annexin Xii Hexamer
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GE +GTDES FNA+L TRSYPQL ++F +Y ++ + +AI EFSGDIK GL+AI
Sbjct: 180 GEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAI 237
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ +GTDE + IL TRS Q ++ + Y TL G L++ + E SG+ + +A+
Sbjct: 22 RKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALAL 81
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE+ ILCT+S Q+ + + + L +L++ I E SG+ + L+++
Sbjct: 100 LGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSM 153
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTD + FN IL TRSYPQL VF +Y + H++++ + E GDI++ L AI
Sbjct: 178 GERRKGTDVNVFNTILTTRSYPQLRRVFQKYTKYSKHDMNKVLDLELKGDIEKCLTAIVK 237
Query: 100 LTNYKPGF 107
KP F
Sbjct: 238 CATSKPAF 245
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 42 LMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
++ G DE+T IL R+ Q ++ + Y TG LDE + + +G ++E ++A+
Sbjct: 24 MVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLAL 79
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
LGTDE T IL +R+ ++ ++ Y +L + I + SGD + L++++
Sbjct: 98 LGTDEDTLIEILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLA 152
>pdb|1ALA|A Chain A, Structure Of Chicken Annexin V At 2.25-Angstroms
Resolution
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R GEL GTDE TF IL TRS L VF +Y T++G +++E I RE SGD+++ L+A+
Sbjct: 181 RAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAV 240
Query: 98 SPLTNYKPGF 107
P +
Sbjct: 241 VKCIRSVPAY 250
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ +GTDE T IL +R+ Q E+ S + TL G +L + + E +G + ++++
Sbjct: 25 RKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSL 84
>pdb|1YII|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Ca2+
pdb|1YJ0|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Zn2+
Length = 320
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R GEL GTDE TF IL TRS L VF +Y T++G +++E I RE SGD+++ L+A+
Sbjct: 180 RAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAV 239
Query: 98 SPLTNYKPGF 107
P +
Sbjct: 240 VKCIRSVPAY 249
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ +GTDE T IL +R+ Q E+ S + TL G +L + + E +G + ++++
Sbjct: 24 RKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSL 83
>pdb|4D8F|A Chain A, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
1 - High Mn)
pdb|4D8F|B Chain B, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
1 - High Mn)
pdb|4D8F|C Chain C, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
1 - High Mn)
pdb|4D8F|D Chain D, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
1 - High Mn)
pdb|4D8G|A Chain A, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
2 - Low Mn)
pdb|4D8G|B Chain B, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
2 - Low Mn)
pdb|4D8G|C Chain C, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
2 - Low Mn)
pdb|4D8G|D Chain D, Chlamydia Trachomatis Nrdb With A MnFE COFACTOR (PROCEDURE
2 - Low Mn)
Length = 366
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 132 EERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAEN 191
++ I ++ AV +E E+ + LP ++G+ + Y++++ADR L +G Y +N
Sbjct: 274 QQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKN 333
Query: 192 PFDFM-ENISLEGKTNFFERKVGEYQKSSVMA 222
PF +M E I L + NFFE +V EYQ ++ +
Sbjct: 334 PFPWMSETIDLNKEKNFFETRVIEYQHAASLT 365
>pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
Reductase From Chlamydia Trachomatis
Length = 346
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 132 EERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAEN 191
++ I ++ AV +E E+ + LP ++G+ + Y++++ADR L +G Y +N
Sbjct: 254 QQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKN 313
Query: 192 PFDFM-ENISLEGKTNFFERKVGEYQKSSVMA 222
PF +M E I L + NFFE +V EYQ ++ +
Sbjct: 314 PFPWMSETIDLNKEKNFFETRVIEYQHAASLT 345
>pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
Reductase R2 From Chlamydia Trachomatis
Length = 346
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 132 EERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAEN 191
++ I ++ AV +E E+ + LP ++G+ + Y++++ADR L +G Y +N
Sbjct: 254 QQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKN 313
Query: 192 PFDFM-ENISLEGKTNFFERKVGEYQKSSVMA 222
PF +M E I L + NFFE +V EYQ ++ +
Sbjct: 314 PFPWMSETIDLNKEKNFFETRVIEYQHAASLT 345
>pdb|1AVC|A Chain A, Bovine Annexin Vi (Calcium-Bound)
Length = 673
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Query: 48 ESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
E+ F ILCTRSYP L VF ++ +T ++++ I +E SGD+++ +AI KP F
Sbjct: 544 ETRFMMILCTRSYPDLRRVFQEFVKMTNYDVEHTIKKEMSGDVRDVFVAIVQSVKNKPLF 603
Query: 108 GLIMCGLHCEFACLMFKHLVNKPSEERIKSIVL------DAVLVEQEFL 150
FA ++K + +EE+ + ++ D + + +EF+
Sbjct: 604 ----------FADKLYKSMKGAGTEEKTLTRIMVSRSEIDLLNIRREFI 642
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GEL GTDE+ F IL RS L VF +Y TG ++ +I E SGD ++ ++A+
Sbjct: 188 GELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAV 245
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDI 90
R+ LGTDE T I+ RS Q ++ + + G +L + E SGD+
Sbjct: 373 RKAMKGLGTDEDTIIDIITHRSNAQRQQIRQTFKSHFGRDLMADLKSELSGDL 425
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
GTDE IL TR+ ++ + Y L++A+ + SG K LI+++
Sbjct: 452 GTDEKALIEILATRTNAEIQAINKAYKEDYHKTLEDALSSDTSGHFKRILISLA 505
>pdb|1M9I|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant
T356d Of Annexin Vi
Length = 672
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 48 ESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
E+ F ILCTRSYP L VF ++ +T ++++ I +E SGD+++ +AI KP F
Sbjct: 543 ETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLF 602
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE+ F IL RS L VF +Y TG ++ +I E SGD ++ ++A+
Sbjct: 187 GELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVK 246
Query: 100 LTNYKPGF 107
P +
Sbjct: 247 CIRSTPEY 254
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDI 90
R+ LGTDE T I+ RS Q ++ + + G +L + E SGD+
Sbjct: 372 RKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDL 424
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYK 104
GTDE IL TR+ ++ + Y L++A+ + SG + LI+++ +
Sbjct: 451 GTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREE 510
Query: 105 PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
G L + A + + + + PS ++
Sbjct: 511 GGENLDQAREDAQVAAEILE-IADTPSGDK 539
>pdb|1BCY|A Chain A, Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEKLIVAL 82
>pdb|1BCZ|A Chain A, Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E SG ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELSGKFEKLIVAL 82
>pdb|1BCW|A Chain A, Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELAGKFEKLIVAL 82
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|2IE6|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Xenon
pdb|2IE7|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Nitrous Oxide
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 161 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 210
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 211 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 247
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 22 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 81
>pdb|1A8A|A Chain A, Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B|A Chain A, Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 82
>pdb|1N44|A Chain A, Crystal Structure Of Annexin V R23e Mutant
Length = 319
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 29 LGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 82
>pdb|1N42|A Chain A, Crystal Structure Of Annexin V R149e Mutant
Length = 319
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 82
>pdb|1N41|A Chain A, Crystal Structure Of Annexin V K27e Mutant
Length = 319
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 29 LGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 82
>pdb|2RAN|A Chain A, Rat Annexin V Crystal Structure: Ca2+-Induced
Conformational Changes
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 161 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 210
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 211 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 247
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 22 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 81
>pdb|1BC0|A Chain A, Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKAGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 28 RSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFS 87
R+ + +A +G LGTDE + +L RS Q ++ ++ TL G +L + E +
Sbjct: 16 RADAEVLRKAMKG---LGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELT 72
Query: 88 GDIKEGLIAI 97
G ++ ++A+
Sbjct: 73 GKFEKLIVAL 82
>pdb|2H0L|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 161 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEEFITILGTRSVSHLRRVFDKY 210
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 211 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 247
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 28 LGTDEDSILNLLTARSNAQRQQIAEEFETLFGRDLVNDMKSELTGKFEKLIVAL 81
>pdb|2H0K|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
pdb|2H0K|B Chain B, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 161 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEEFITILGTRSVSHLRRVFDKY 210
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE SG+++ L+A+ P +
Sbjct: 211 MTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 247
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 28 LGTDEDSILNLLTARSNAQRQQIAEEFETLFGRDLVNDMKSELTGKFEKLIVAL 81
>pdb|2H0M|A Chain A, Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F IL TRS L VF +Y T++G +++E I RE SG+++ L+A+
Sbjct: 181 GELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVK 240
Query: 100 LTNYKPGF 107
P +
Sbjct: 241 SIRSIPAY 248
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVAL 82
>pdb|1AVH|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1AVH|B Chain B, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
Length = 320
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVK 242
Query: 100 LTNYKPGF 107
P +
Sbjct: 243 SIRSIPAY 250
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 25 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVAL 84
>pdb|1HVE|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
pdb|1HVG|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVK 241
Query: 100 LTNYKPGF 107
P +
Sbjct: 242 SIRSIPAY 249
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 24 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFQKLIVAL 83
>pdb|1ANW|A Chain A, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANW|B Chain B, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANX|A Chain A, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|B Chain B, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|C Chain C, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
Length = 319
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVK 241
Query: 100 LTNYKPGF 107
P +
Sbjct: 242 SIRSIPAY 249
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 24 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVAL 83
>pdb|1HVF|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVK 241
Query: 100 LTNYKPGF 107
P +
Sbjct: 242 SIRSIPAY 249
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 24 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFQKLIVAL 83
>pdb|1HVD|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVK 241
Query: 100 LTNYKPGF 107
P +
Sbjct: 242 SIRSIPAY 249
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 24 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVAL 83
>pdb|1BC1|A Chain A, Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k,
S228k, S303k)
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE G+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETKGNLENLLLAVVKSIRSIPAY 248
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEKLIVAL 82
>pdb|1BC3|A Chain A, Recombinant Rat Annexin V, Triple Mutant (T72k, S144k,
S228k)
Length = 319
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 11 DTYIKDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQY 70
DT I D + + A + F+A GEL GTDE F IL TRS L VF +Y
Sbjct: 162 DTAIDDAQVELDAQAL--------FQA--GELKWGTDEEKFITILGTRSVSHLRRVFDKY 211
Query: 71 YTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
T++G +++E I RE G+++ L+A+ P +
Sbjct: 212 MTISGFQIEETIDRETKGNLENLLLAVVKSIRSIPAY 248
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L RS Q ++ ++ TL G +L + E G ++ ++A+
Sbjct: 23 RKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEKLIVAL 82
>pdb|2XO2|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Azidohomoalanine
pdb|2XO3|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Homopropargylglycine
Length = 320
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYXTISGFQIEETIDRETSGNLEQLLLAVVK 242
Query: 100 LTNYKPGF 107
P +
Sbjct: 243 SIRSIPAY 250
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 25 RKAXKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVAL 84
>pdb|1SAV|A Chain A, Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GEL GTDE F I TRS L +VF +Y T++G +++E I RE SG++++ L+A+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAV 240
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
R+ LGTDE + +L +RS Q E+ + + TL G +L + + E +G ++ ++A+
Sbjct: 25 RKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVAL 84
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTD + F IL TRSYP L VF +Y + H++++ + E GDI+ L +
Sbjct: 210 GERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVK 269
Query: 100 LTNYKPGF 107
KP F
Sbjct: 270 CATSKPMF 277
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
LGTDE T N IL +R+ ++ E+ Y +L + I + SGD ++ L++++
Sbjct: 130 LGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLA 184
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G DE+T IL R+ Q ++ + Y G LDEA+ + +G ++E +A+
Sbjct: 59 GVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALAL 111
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GT T I+ +RS + ++ + Y L G L +AI E GD ++ L+A+
Sbjct: 289 IGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVAL 342
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+ GE GTDE F ILC RS+PQL F +Y ++ ++ ++I E SG ++ L+AI
Sbjct: 184 KAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAI 243
Query: 98 SPLTNYKPGF 107
P F
Sbjct: 244 VNCVRNTPAF 253
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
GT+E IL TR+ Q+ ++ YYT+ L + I E SGD ++ L+ ++
Sbjct: 107 GTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLA 160
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE T N I+ +RS L ++ +++ G+ L AI + SGD + L+ I
Sbjct: 265 IGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE +IL RS Q + +Y G EL + + + SG + ++A+
Sbjct: 34 IGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVAL 87
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+ GE GTDE F ILC RS+PQL F +Y ++ ++ ++I E SG ++ L+AI
Sbjct: 184 KAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAI 243
Query: 98 SPLTNYKPGF 107
P F
Sbjct: 244 VNCVRNTPAF 253
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
GT+E IL TR+ Q+ ++ YYT+ L + I E SGD ++ L+ ++
Sbjct: 107 GTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLA 160
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE T N I+ +RS L ++ +++ G+ L AI + SGD + L+ I
Sbjct: 265 IGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE +IL RS Q + +Y G EL + + + SG + ++A+
Sbjct: 34 IGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVAL 87
>pdb|2ZHI|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.58 A Resolution
pdb|2ZHJ|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.34 A Resolution
Length = 322
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTDE F +ILC+R+ L VF +Y ++ +++++I E SG ++ L+AI
Sbjct: 185 GEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVK 244
Query: 100 LTNYKPGF 107
KP +
Sbjct: 245 CMRNKPAY 252
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIA- 96
R+ LGTDE +L R+ Q E+ + Y + G +L E + E S + ++ ++
Sbjct: 27 RKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGM 86
Query: 97 ISPLTNYK-PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
++P Y M G + CL+ P E R
Sbjct: 87 MTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIR 125
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTD+ST ++ +R+ + ++ + + L G L I + SGD ++ L+ +
Sbjct: 264 LGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLIL 317
>pdb|1W3W|A Chain A, The 2.1 Angstroem Resolution Structure Of Annexin A8
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE + GTDE F ILCTRS L VF +Y + ++++I E G ++E ++ +
Sbjct: 190 GEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVK 249
Query: 100 LTN 102
T
Sbjct: 250 CTQ 252
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGT E IL +R+ QL E+ Y G L+E I + SG ++ L+ +
Sbjct: 109 LGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCL 162
>pdb|1W45|A Chain A, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus.
pdb|1W45|B Chain B, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE + GTDE F ILCTRS L VF +Y + ++++I E G ++E ++ +
Sbjct: 190 GEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVK 249
Query: 100 LTN 102
T
Sbjct: 250 CTQ 252
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGT E IL +R+ QL E+ Y G L+E I + SG ++ L+ +
Sbjct: 109 LGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCL 162
>pdb|2ZOC|A Chain A, Crystal Structure Of Recombinant Human Annexin Iv
pdb|2ZOC|B Chain B, Crystal Structure Of Recombinant Human Annexin Iv
Length = 319
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTDE F +LC+R+ L VF +Y ++ +++++I E SG ++ L+AI
Sbjct: 182 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVK 241
Query: 100 LTNYKPGF 107
K +
Sbjct: 242 CMRNKSAY 249
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 38 RRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIA- 96
R+ LGTDE ++L R+ Q E+ + Y + G +L + + E SG+ ++ ++
Sbjct: 24 RKAMKGLGTDEDAIISVLAYRNTAQRQEIRTAYKSTIGRDLIDDLKSELSGNFEQVIVGM 83
Query: 97 ISPLTNYK-PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
++P Y M G + CL+ P E R
Sbjct: 84 MTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIR 122
>pdb|1AOW|A Chain A, Annexin Iv
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTDE F +LC+R+ L VF +Y + +++++I E SG ++ L+AI
Sbjct: 172 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVK 231
Query: 100 LTNYKPGF 107
K +
Sbjct: 232 CMRNKSAY 239
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIA-ISPLTN 102
LGTDE +L RS Q E+ + Y T G +L + + E SG+ ++ ++ ++P
Sbjct: 20 LGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVL 79
Query: 103 YK-PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
Y M G + CL+ P E R
Sbjct: 80 YDVQEVRKAMKGAGTDEGCLIEILASRTPEEIR 112
>pdb|1I4A|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant T6d
Of Annexin Iv
Length = 318
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTDE F +LC+R+ L VF +Y + +++++I E SG ++ L+AI
Sbjct: 181 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVK 240
Query: 100 LTNYKPGF 107
K +
Sbjct: 241 CMRNKSAY 248
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIA-ISPLTN 102
LGTDE +L RS Q E+ + Y T G +L + + E SG+ ++ ++ ++P
Sbjct: 29 LGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVL 88
Query: 103 YK-PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
Y M G + CL+ P E R
Sbjct: 89 YDVQELRKAMKGAGTDEGCLIEILASRTPEEIR 121
>pdb|1ANN|A Chain A, Annexin Iv
Length = 318
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GE GTDE F +LC+R+ L VF +Y + +++++I E SG ++ L+AI
Sbjct: 181 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVK 240
Query: 100 LTNYKPGF 107
K +
Sbjct: 241 CMRNKSAY 248
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIA-ISPLTN 102
LGTDE +L RS Q E+ + Y T G +L + + E SG+ ++ ++ ++P
Sbjct: 29 LGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVL 88
Query: 103 YK-PGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
Y M G + CL+ P E R
Sbjct: 89 YDVQELRKAMKGAGTDEGCLIEILASRTPEEIR 121
>pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
Length = 346
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 123 FKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLG 182
F L + ++ +K+ + A +E+++ + K+ G+N + + YI ++A++ V LG
Sbjct: 238 FPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGINPEDXETYISFIANKRAVQLG 297
Query: 183 CSKHY--FAENPFDFM---ENISLEGKTNFFERKVGEYQKSSV 220
K Y NP ++ E+++ GK++FFE+K +Y K S
Sbjct: 298 XEKPYPEIKHNPXKWIRAYEDVN-SGKSDFFEQKSRQYAKVSA 339
>pdb|2HYU|A Chain A, Human Annexin A2 With Heparin Tetrasaccharide Bound
pdb|2HYV|A Chain A, Human Annexin A2 With Heparin Hexasaccharide Bound
pdb|2HYW|A Chain A, Human Annexin A2 With Calcium Bound
pdb|2HYW|B Chain B, Human Annexin A2 With Calcium Bound
Length = 308
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYK 104
GTD + +I+ RS P L +VF +Y + + +++ E+I +E GD++ + + K
Sbjct: 176 GTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNK 235
Query: 105 PGFGLIMCGLHCEFACLMFKHLVNKPSEERI 135
P + FA ++ + K + +++
Sbjct: 236 PLY----------FADRLYDSMKGKGTRDKV 256
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
LGTDE + I+C+R+ +L E+ Y + +L++ I + SGD ++ ++A++
Sbjct: 90 LGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALA 144
>pdb|1W7B|A Chain A, Annexin A2: Does It Induce Membrane Aggregation By A New
Multimeric State Of The Protein
Length = 339
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYK 104
GTD + +I+ RS P L +VF +Y + + +++ E+I +E GD++ + + K
Sbjct: 207 GTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNK 266
Query: 105 P 105
P
Sbjct: 267 P 267
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
LGTDE + I+C+R+ +L E+ Y + +L++ I + SGD ++ ++A++
Sbjct: 121 LGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALA 175
>pdb|1XJL|A Chain A, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
pdb|1XJL|B Chain B, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
Length = 319
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYK 104
GTD + +I+ RS P L +VF +Y + + +++ E+I +E GD++ + + K
Sbjct: 187 GTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNK 246
Query: 105 PGFGLIMCGLHCEFACLMFKHLVNKPSEERI 135
P + FA ++ + K + +++
Sbjct: 247 PLY----------FADRLYDSMKGKGTRDKV 267
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
LGTDE + I+C+R+ +L E+ Y + +L++ I + SGD ++ ++A++
Sbjct: 101 LGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALA 155
>pdb|4DR0|A Chain A, Crystal Structure Of Bacillus Subtilis Dimanganese(Ii)
Nrdf
pdb|4DR0|B Chain B, Crystal Structure Of Bacillus Subtilis Dimanganese(Ii)
Nrdf
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 113 GLHCEFACLMFKHLVNKPSEER---IKSIVLDAV--LVEQEF-LTEALPVKLIGMNCDLM 166
+H + L+ + + NK +EE+ ++ +D + L E E TE L +G++ D+
Sbjct: 220 AIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDL-YDQVGLSHDV- 277
Query: 167 KQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKT---NFFERKVGEYQKSSVMAD 223
K++I Y A++ L++LG YF E + + L KT +FF K Y+K++V
Sbjct: 278 KKFIRYNANKALMNLGFDP-YFEEEDINPIVLNGLNTKTKSHDFFSMKGNGYKKATVEPL 336
Query: 224 QDNQVFRLDEQ 234
+D+ + DE+
Sbjct: 337 KDDDFYFEDEK 347
>pdb|1BO9|A Chain A, Nmr Solution Structure Of Domain 1 Of Human Annexin I
Length = 73
Score = 35.8 bits (81), Expect = 0.022, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 42 LMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
++ G DE+T IL R+ Q ++ + Y TG LDE + + +G ++E ++A+
Sbjct: 16 MVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLAL 71
>pdb|1YCN|A Chain A, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|1YCN|B Chain B, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|2Q4C|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
pdb|2Q4C|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
Length = 317
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GTDE I+ TR+ L + +Y L++AI ++ GD ++ L+A+
Sbjct: 259 GTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKMLVAL 311
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 54 ILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMCG 113
+ CTR+ QL Y+ L+E + +GD ++ L+++ +T+Y+ +
Sbjct: 109 VACTRTSTQLLHARQAYHARYKKSLEEDVAHHTTGDFRKLLVSL--VTSYRYEGDEVNMT 166
Query: 114 LHCEFACLMFKHLVNK 129
L + A L+ + + +K
Sbjct: 167 LAKQEAKLVHEKIKDK 182
>pdb|3BRX|A Chain A, Crystal Structure Of Calcium-Bound Cotton Annexin Gh1
Length = 317
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
GTDE ++CTR+ L + +Y L AI ++ GD ++ L+ ++
Sbjct: 259 GTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLA 312
>pdb|1N00|A Chain A, Annexin Gh1 From Cotton
Length = 321
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAIS 98
GTDE ++CTR+ L + +Y L AI ++ GD ++ L+ ++
Sbjct: 263 GTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLA 316
>pdb|1SHY|B Chain B, The Crystal Structure Of Hgf Beta-Chain In Complex With
The Sema Domain Of The Met Receptor
Length = 551
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 68 SQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLV 127
+ Y + G +L IG + DI G+ A S + +P MC ++ F +V
Sbjct: 295 AAYVSKPGAQLARQIGASLNDDILFGVFAQSKPDSAEPMDRSAMCAFPIKYVNDFFNKIV 354
Query: 128 NK 129
NK
Sbjct: 355 NK 356
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,836,783
Number of Sequences: 62578
Number of extensions: 274448
Number of successful extensions: 1102
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 956
Number of HSP's gapped (non-prelim): 144
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)