Query psy4803
Match_columns 235
No_of_seqs 200 out of 1975
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 18:10:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4803.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4803hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jk0_A RNR Y2, ribonucleoside- 100.0 2.1E-42 7.2E-47 308.6 8.3 209 3-235 199-419 (419)
2 2p1i_A Ribonucleotide reductas 100.0 4.5E-42 1.6E-46 301.6 9.3 208 3-235 133-349 (349)
3 1jk0_B RNR Y4, ribonucleoside- 100.0 3.1E-42 1.1E-46 302.2 6.8 208 3-235 127-345 (345)
4 1h0o_A Ribonucleoside-diphosph 100.0 3.9E-42 1.3E-46 305.1 5.7 209 3-235 173-390 (390)
5 1syy_A Ribonucleoside-diphosph 100.0 2.6E-36 9.1E-41 265.1 9.1 195 3-222 123-345 (346)
6 4a58_A Ribonucleoside-diphosph 100.0 2E-36 6.9E-41 263.1 8.2 189 3-220 116-321 (324)
7 2rcc_A Ribonucleoside-diphosph 100.0 1.2E-35 4.2E-40 261.0 10.8 196 3-222 122-341 (346)
8 1mxr_A Ribonucleotide reductas 100.0 2.6E-36 8.9E-41 267.7 5.6 145 82-229 204-370 (375)
9 4dr0_A Ribonucleoside-diphosph 100.0 7.5E-35 2.6E-39 255.5 10.3 201 2-231 121-343 (350)
10 3n37_A Ribonucleoside-diphosph 100.0 2.9E-35 9.8E-40 255.8 6.9 197 3-231 101-319 (319)
11 3dhz_A Ribonucleotide reductas 100.0 9.2E-35 3.2E-39 253.4 7.5 197 3-231 111-329 (329)
12 3olj_A Ribonucleoside-diphosph 100.0 1.1E-34 3.8E-39 248.5 5.3 166 3-196 108-286 (286)
13 2o1z_A Ribonucleotide reductas 100.0 3.8E-32 1.3E-36 235.1 7.6 170 3-197 132-310 (311)
14 3mjo_A Ribonucleotide reductas 99.9 6.3E-26 2.2E-30 195.0 6.0 157 3-189 110-282 (296)
15 3ee4_A Probable ribonucleoside 99.9 1.5E-22 5E-27 175.9 7.9 162 3-189 113-294 (323)
16 1n00_A Annexin GH1; membrane-b 99.6 1.6E-15 5.3E-20 131.7 10.1 108 22-130 8-119 (321)
17 1n00_A Annexin GH1; membrane-b 99.6 2.3E-15 7.7E-20 130.7 10.5 128 22-151 80-215 (321)
18 1dm5_A Annexin XII E105K mutan 99.6 2.4E-15 8E-20 130.3 10.0 99 31-130 15-115 (315)
19 1w3w_A Annexin A8; coagulation 99.6 2.4E-15 8.3E-20 130.7 9.6 100 30-130 23-124 (327)
20 1dm5_A Annexin XII E105K mutan 99.6 3.8E-15 1.3E-19 129.0 10.5 105 22-127 76-196 (315)
21 1yii_A Annexin A5, annexin V, 99.6 4.1E-15 1.4E-19 129.1 10.6 127 22-150 78-213 (320)
22 2hyv_A Annexin A2; calcium-bin 99.6 2.4E-15 8.4E-20 129.8 8.8 100 30-130 4-105 (308)
23 1yii_A Annexin A5, annexin V, 99.6 3.7E-15 1.3E-19 129.4 9.3 100 30-130 16-117 (320)
24 1axn_A Annexin III; annexin fa 99.6 3.8E-15 1.3E-19 129.4 8.9 100 30-130 20-121 (323)
25 1hm6_A Annexin 1; phospholipid 99.6 4.2E-15 1.4E-19 130.1 9.0 99 30-129 44-144 (346)
26 2zhj_A Annexin A4; zynogen gra 99.6 1.1E-14 3.9E-19 126.3 11.2 79 22-100 81-161 (322)
27 2zhj_A Annexin A4; zynogen gra 99.6 6.1E-15 2.1E-19 128.1 9.2 100 30-130 19-120 (322)
28 1axn_A Annexin III; annexin fa 99.6 1.8E-14 6.1E-19 125.2 11.4 106 22-128 82-203 (323)
29 1w3w_A Annexin A8; coagulation 99.5 1.6E-14 5.6E-19 125.5 10.4 95 32-127 181-281 (327)
30 1hm6_A Annexin 1; phospholipid 99.5 5.3E-14 1.8E-18 123.1 12.8 127 22-150 106-241 (346)
31 2ii2_A Alpha-11 giardin; helix 99.5 4.2E-15 1.4E-19 128.4 5.5 97 30-127 156-261 (310)
32 2hyv_A Annexin A2; calcium-bin 99.5 2.4E-14 8.1E-19 123.6 9.8 96 32-128 162-263 (308)
33 4evf_A Alpha-1 giardin, giardi 99.5 1.6E-13 5.5E-18 117.8 12.2 78 22-100 65-146 (295)
34 3chj_A Alpha-14 giardin; calci 99.5 1.8E-14 6.1E-19 125.7 5.0 95 32-128 167-270 (337)
35 1m9i_A Annexin VI; calcium-bin 99.5 9E-14 3.1E-18 130.9 9.7 98 31-129 365-464 (672)
36 1m9i_A Annexin VI; calcium-bin 99.5 9.9E-14 3.4E-18 130.6 9.4 99 30-129 21-121 (672)
37 3chj_A Alpha-14 giardin; calci 99.5 5.8E-14 2E-18 122.4 7.3 97 32-130 14-112 (337)
38 2ii2_A Alpha-11 giardin; helix 99.5 2E-13 6.7E-18 117.9 9.8 106 22-129 67-185 (310)
39 4evf_A Alpha-1 giardin, giardi 99.4 2.5E-13 8.5E-18 116.6 9.8 98 29-130 3-103 (295)
No 1
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=100.00 E-value=2.1e-42 Score=308.60 Aligned_cols=209 Identities=45% Similarity=0.705 Sum_probs=145.7
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++|+++++||.+|+++| ++.+.|+.. +...-+.++...+...+.+.++ ....+
T Consensus 199 HsesYS~il~tl~~d~~e~~~iF~~i~~~p~L~-~Ka~~i~~~~~~~~~~~~~~lv-----a~~~l-------------- 258 (419)
T 1jk0_A 199 HSETYSLLIDTYIKDPKESEFLFNAIHTIPEIG-EKAEWALRWIQDADALFGERLV-----AFASI-------------- 258 (419)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHTTCHHHH-HHHHHHHHHTTSSSCCHHHHHH-----HHHHH--------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhhCHHHH-HHHHHHHHHHhccchhHHHHHH-----HHHHH--------------
Confidence 87 99999999999999999999 999999811 1111224444333333444444 23222
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHhh
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEA 153 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f~~~~ 153 (235)
++..|+|.| ++++| ||+.+++++|.|||++|+.+++.+++.+..+++.++|++++.+||++|++|++++
T Consensus 259 -EGI~fsg~Fa~~~~l~~rg~M---pG~~~~i~lI~RDE~lH~~f~~~l~~~l~~~~~~e~v~el~~eave~E~~~~~~~ 334 (419)
T 1jk0_A 259 -EGVFFSGSFASIFWLKKRGMM---PGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 334 (419)
T ss_dssp -HHTTTHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHHcCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 888899998 45666 9999999999999999999999999998888899999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHhhhhcCCCCccccccchhhccccccCC---CCCcee
Q psy4803 154 LPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQ---DNQVFR 230 (235)
Q Consensus 154 ~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~~~~~~~~~~nffe~~~~~Y~~~~~~~~~---~~~~~~ 230 (235)
+|.+++|||++.|++||+|+||++|.+||++|+|++.||+|||+.++..+++||||+++++|+++++.... .+++|+
T Consensus 335 lp~~liGln~~~~~~YI~Y~Anr~L~~LG~~~~y~~~NP~~wm~~is~~~ktnFFE~r~t~Y~k~~~~~~~~~~~~~~~~ 414 (419)
T 1jk0_A 335 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQEAGAFT 414 (419)
T ss_dssp SCGGGGTCCHHHHHHHHHHHHHHHHHTTTCCCSSCCCCCCGGGGC-----------------------------------
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCChHHHHHhccccccccCcCCcccccccccccccCCCCCCccc
Confidence 99889999999999999999999999999999999999999999888888899999999999999877643 367899
Q ss_pred ccCCC
Q psy4803 231 LDEQF 235 (235)
Q Consensus 231 ~~~~~ 235 (235)
||+||
T Consensus 415 ~~~~f 419 (419)
T 1jk0_A 415 FNEDF 419 (419)
T ss_dssp -----
T ss_pred cCCCC
Confidence 99998
No 2
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=100.00 E-value=4.5e-42 Score=301.61 Aligned_cols=208 Identities=44% Similarity=0.670 Sum_probs=142.2
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++||.+++++| .+.+.|+. .+...-..++...++ .+.+.++ ....+
T Consensus 133 Hs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l-~~K~~~i~~~~~~~~-~~~~~lv-----a~~~l-------------- 191 (349)
T 2p1i_A 133 HSETYSLLIDNYIKDEKERLNLFHAIENIPAI-KNKALWAAKWINDTN-SFAERIV-----ANACV-------------- 191 (349)
T ss_dssp HHHHHHHHHHHHTCSHHHHHHTTHHHHSCHHH-HHHHHHHHHTSSCSS-CHHHHHH-----HHHHH--------------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHH-HHHHHHHHHHHcCch-HHHHHHH-----HHHHH--------------
Confidence 87 99999999999999999999 99999982 111222244443222 2333333 22223
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHhh
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEA 153 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f~~~~ 153 (235)
++..|+++| ++++| ||+.+++++|.|||++|+.+++.+++.++.+++.++|.+++.+||++|++|++++
T Consensus 192 -EGi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~~v~~l~~eave~E~~~~~~~ 267 (349)
T 2p1i_A 192 -EGILFSGSFCAIFWFKKQNKL---HGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICES 267 (349)
T ss_dssp -TTTTTHHHHHHHHHHHTTTCS---TTHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -HHHHHHHHHHHHHHHHhcCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999 45566 9999999999999999999999999999988899999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHhhhhcCCCCccccccchhhccccccCCCCCceeccC
Q psy4803 154 LPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDE 233 (235)
Q Consensus 154 ~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~~~~~~~~~~nffe~~~~~Y~~~~~~~~~~~~~~~~~~ 233 (235)
+|.+++|+|++.|++||+|+||+||.+||++|+|++.||+|||+.++..+++||||+++++|+++++.....+++|+||+
T Consensus 268 l~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~k~~~~~~~~~~~~~~~~ 347 (349)
T 2p1i_A 268 LPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFSLNT 347 (349)
T ss_dssp SCSTTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCCC--------------------------------------
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCChHHHHHhcccccCCcccCCccccccccccccCCCCeeecCC
Confidence 98889999999999999999999999999999999999999999888778899999999999999887765678899999
Q ss_pred CC
Q psy4803 234 QF 235 (235)
Q Consensus 234 ~~ 235 (235)
||
T Consensus 348 ~f 349 (349)
T 2p1i_A 348 DF 349 (349)
T ss_dssp --
T ss_pred CC
Confidence 98
No 3
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=100.00 E-value=3.1e-42 Score=302.21 Aligned_cols=208 Identities=33% Similarity=0.517 Sum_probs=122.9
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++||.++ ++| .+.+.|+.. +...-..++...+...+.+.++ ....+
T Consensus 127 Hs~sYs~il~tl~~~~~e~-~~f~~~~~~p~l~-~K~~~i~~~~~~~~~~~~~~lv-----a~~~l-------------- 185 (345)
T 1jk0_B 127 YSEVYSMMVDAFFKDPKNI-PLFKEIANLPEVK-HKAAFIERWISNDDSLYAERLV-----AFAAK-------------- 185 (345)
T ss_dssp HHHHHHHHHHHHSCSCTTS-CSGGGGCSCHHHH-HHHHHHHHTTSSSSCCHHHHHH-----HHHHH--------------
T ss_pred HHHHHHHHHHHHCCCHHHH-HHHHHHhhCHHHH-HHHHHHHHHHhCCcHHHHHHHH-----HHHHH--------------
Confidence 87 9999999999999999 999 999999811 1111113444322222444444 23223
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHhh
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEA 153 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f~~~~ 153 (235)
++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.++.+++.++|.+++.+||++|++|++++
T Consensus 186 -Egi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~v~~l~~eave~E~~~~~~~ 261 (345)
T 1jk0_B 186 -EGIFQAGNYASMFWLTDKKIM---PGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261 (345)
T ss_dssp -HHTTTHHHHHHHHHHTSSSSC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHHHHHHHHcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999 44566 9999999999999999999999999999988889999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHhhhhcCCCCccccccchhhccccccCC--CCCceec
Q psy4803 154 LPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQ--DNQVFRL 231 (235)
Q Consensus 154 ~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~~~~~~~~~~nffe~~~~~Y~~~~~~~~~--~~~~~~~ 231 (235)
+|.+++|+|++.|++||+|+||+||.+||++|+|++.||+|||+.++..+++||||+++++|+++++..+. .+++|+|
T Consensus 262 l~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~~~~~~~~~~~~~~~~~~ 341 (345)
T 1jk0_B 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSDYQKASDMSKSATPSKEINF 341 (345)
T ss_dssp CC-----------CTHHHHHHHHHHHHTTCCCCC----------------------------------------------
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHhcccccCccccCCcchhhcccccccccCCCceeec
Confidence 99889999999999999999999999999999999999999999887778899999999999999887654 3678999
Q ss_pred cCCC
Q psy4803 232 DEQF 235 (235)
Q Consensus 232 ~~~~ 235 (235)
|+||
T Consensus 342 ~~~f 345 (345)
T 1jk0_B 342 DDDF 345 (345)
T ss_dssp ----
T ss_pred CCCC
Confidence 9998
No 4
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=100.00 E-value=3.9e-42 Score=305.10 Aligned_cols=209 Identities=55% Similarity=0.865 Sum_probs=141.6
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++||.+++++| ++.+.|+...+ ..-+.++...+...+.+.++ ....+
T Consensus 173 HsesYS~il~tl~~d~~e~~~if~~~~~~p~l~~K-a~~i~~~~~~~~~~~~~~lv-----a~~~l-------------- 232 (390)
T 1h0o_A 173 HSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKK-ADWALRWIGDKEATYGERVV-----AFAAV-------------- 232 (390)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHTHHHHCHHHHHH-HHHHHHHHHCSSSCHHHHHH-----HHHHH--------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHhccchhHHHHHH-----HHHHH--------------
Confidence 87 99999999999999999999 99999971111 11112221111122333333 22222
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHhh
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEA 153 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f~~~~ 153 (235)
++..|+|+| ++++| ||+.+++++|.|||++|+.+++.+++.+..+++.++|++++.+||++|.+|++++
T Consensus 233 -EGi~Fys~F~~~~~l~~rg~M---pG~~~~i~lI~RDE~lH~~f~~~l~~~l~~~~~~~~v~el~~eave~E~~~~~~~ 308 (390)
T 1h0o_A 233 -EGIFFSGSFASIFWLKKRGLM---PGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308 (390)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHHcCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 888899998 45667 9999999999999999999999999998888899999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHhhhhcCCCCccccccchhhccccccCCCCCceeccC
Q psy4803 154 LPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFMENISLEGKTNFFERKVGEYQKSSVMADQDNQVFRLDE 233 (235)
Q Consensus 154 ~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~~~~~~~~~~nffe~~~~~Y~~~~~~~~~~~~~~~~~~ 233 (235)
+|.+++|+|++.+++||+|+||++|.+||++|+|++.||+|||+.++..+++||||+++++|+++++.....+++|+||+
T Consensus 309 ~~~~~iGl~~~~~~~YI~y~Anr~L~~LG~~~~y~~~NP~~wm~~~s~~~ktnFFE~r~t~Y~k~~~~~~~~~~~~~~~~ 388 (390)
T 1h0o_A 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFTLDA 388 (390)
T ss_dssp SCGGGGTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCGGGC------------------------------------
T ss_pred ccCCcCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCChHHHHhhcccccCccccCCccccccccccccCcCceeecCC
Confidence 99889999999999999999999999999999999999999999888878899999999999999887765678899999
Q ss_pred CC
Q psy4803 234 QF 235 (235)
Q Consensus 234 ~~ 235 (235)
||
T Consensus 389 ~f 390 (390)
T 1h0o_A 389 DF 390 (390)
T ss_dssp --
T ss_pred CC
Confidence 98
No 5
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=100.00 E-value=2.6e-36 Score=265.15 Aligned_cols=195 Identities=22% Similarity=0.293 Sum_probs=134.8
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHH--HHHHHHhhhccC-------CCc--HHHHHHHHhCCCHHHHHHHHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCS--LWFEARRGELML-------GTD--ESTFNAILCTRSYPQLAEVFSQ 69 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~--d~~~l~~a~~~~-------g~d--e~~~~~iL~~rs~~~l~~i~~~ 69 (235)
|+ +||+++++++.||.+ +| .+.+.|+. -++-+.+....+ +++ ...+.+.++ ....+
T Consensus 123 Hs~sYs~il~tl~~~~~e---~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lv-----a~~~~--- 191 (346)
T 1syy_A 123 HTHTFLYICESLGLDEKE---IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLV-----GYYII--- 191 (346)
T ss_dssp HHHHHHHHHHHHTCCHHH---HTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHH-----HHHTT---
T ss_pred HHHHHHHHHHHHCCCHHH---HHHHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHH-----HHHHH---
Confidence 87 999999999999866 99 88888871 121212111111 111 123333333 22111
Q ss_pred HHHhhCCcHHHHhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhC-CCc------HHHH
Q psy4803 70 YYTLTGHELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVN-KPS------EERI 135 (235)
Q Consensus 70 y~~~~g~~l~~~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~-~~~------~~~i 135 (235)
.++..|+++| ++++| ||+.+++++|.|||++|+.+++.+++.++. .|. .++|
T Consensus 192 -----------lEGi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~~~~~e~~~~v 257 (346)
T 1syy_A 192 -----------MEGIFFYSGFVMILSFHRQNKM---IGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEI 257 (346)
T ss_dssp -----------TTTTHHHHHHHHHHHHHHTTSS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHHhCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhhhHHHHHHH
Confidence 2888999999 45566 999999999999999999999999998875 444 7889
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHH-HhhhhcCCCCccccccch
Q psy4803 136 KSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFM-ENISLEGKTNFFERKVGE 214 (235)
Q Consensus 136 ~~i~~~av~iE~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~-~~~~~~~~~nffe~~~~~ 214 (235)
.+++.+||++|++|++++++.+++|||++.|++||+|+||+||.+||++|+|+++||+||| ++++..+++||||+++++
T Consensus 258 ~~l~~eav~~E~~~~~~~l~~~~~Gln~~~~~~yi~y~an~rL~~lG~~~~y~~~np~pw~~~~~~~~~~~nFFe~~~~~ 337 (346)
T 1syy_A 258 VELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKEKNFFETRVIE 337 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCTTC-------------------
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHhCcCCCCCCCcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999 577777779999999999
Q ss_pred hhcccccc
Q psy4803 215 YQKSSVMA 222 (235)
Q Consensus 215 Y~~~~~~~ 222 (235)
|++++.++
T Consensus 338 Y~~~~~~~ 345 (346)
T 1syy_A 338 YQHAASLT 345 (346)
T ss_dssp --------
T ss_pred ccccccCC
Confidence 99998653
No 6
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=100.00 E-value=2e-36 Score=263.15 Aligned_cols=189 Identities=21% Similarity=0.242 Sum_probs=131.6
Q ss_pred hh-hhHHHHHHHh-cCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHH
Q psy4803 3 HT-VDSLLIDTYI-KDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELD 79 (235)
Q Consensus 3 h~-~ys~~~~~~~-~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~ 79 (235)
|+ +||+++++++ +||.+++.+| ++.+.|+...+ ..-+.++...++ .+.+.+. ....
T Consensus 116 Hs~sYs~il~tl~~~d~~e~~~~f~~~~~~p~l~~K-~~~i~~~~~~~~-~~~~~lv-----a~~~-------------- 174 (324)
T 4a58_A 116 HGETYANILNMLFDGDRAAMNAYAEAIMTDEALQAK-ISWLRDKVAAAV-TLPEKIL-----VFLL-------------- 174 (324)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTCGGGHHH-HHCCCCCHHHCS-SHHHHHH-----HHHH--------------
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHhCch-hHHHHHH-----HHHH--------------
Confidence 88 9999999997 5899999999 99999872111 111223321111 1222222 1111
Q ss_pred HHhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhC---CCcHHHHHHHHHHHHHHHHHH
Q psy4803 80 EAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVN---KPSEERIKSIVLDAVLVEQEF 149 (235)
Q Consensus 80 ~~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~---~~~~~~i~~i~~~av~iE~~f 149 (235)
.++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.+.. +|..++|++++++||++|++|
T Consensus 175 -lEgi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~p~~~~v~~i~~eave~E~~~ 250 (324)
T 4a58_A 175 -IEGIFFISSFYSIALLRVRGLM---PGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQELFRTAVEVETAF 250 (324)
T ss_dssp -HHHTTTHHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 2899999999 67788 999999999999999999999999999874 678999999999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCC----CCchHHHhhhhcCCCCccccccchhhcccc
Q psy4803 150 LTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAE----NPFDFMENISLEGKTNFFERKVGEYQKSSV 220 (235)
Q Consensus 150 ~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~----np~~w~~~~~~~~~~nffe~~~~~Y~~~~~ 220 (235)
++++++ ++.|||++.|++||+|+||+||.+||++|+|+++ ||+|||. ..+++||||+|+++|+|+.+
T Consensus 251 ~~~~~~-~~~~ln~~~~~~Yi~y~An~~L~~LG~~~~y~~~~p~~np~~~~~---~~~~~nFFe~r~~~Y~k~~~ 321 (324)
T 4a58_A 251 IEARGE-GVTLVDVRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMT---SIKQTNFFEQESSDYTMLVV 321 (324)
T ss_dssp HHHHST-TCTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCC--------------------------------
T ss_pred HHHHhc-cccCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcchhhc---cCccCCCCCCchhhccchhc
Confidence 999998 7889999999999999999999999999999775 4556664 57899999999999998754
No 7
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.2e-35 Score=261.02 Aligned_cols=196 Identities=20% Similarity=0.255 Sum_probs=137.3
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHH--HHHHHhhhccC--CCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCC
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSL--WFEARRGELML--GTDESTFNAILCTRSYPQLAEVFSQYYTLTGH 76 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d--~~~l~~a~~~~--g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~ 76 (235)
|+ +||++++++ .+|.+++++| .+.+.|+.. +..+.+....+ ..+...+.+.++ ....+
T Consensus 122 Hs~sYs~il~tl-~~~~e~~~~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lv-----a~~~l---------- 185 (346)
T 2rcc_A 122 HNQSYSYVLSSL-VPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIV-----YDVIL---------- 185 (346)
T ss_dssp HHHHHHHHHHHH-SCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHH-----HHHHH----------
T ss_pred HHHHHHHHHHHh-CChhhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH-----HHHHH----------
Confidence 87 999999999 6888899999 999999811 11122211110 012234444444 22222
Q ss_pred cHHHHhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhC-CC------cHHHHHHHHHHH
Q psy4803 77 ELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVN-KP------SEERIKSIVLDA 142 (235)
Q Consensus 77 ~l~~~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~-~~------~~~~i~~i~~~a 142 (235)
++..|+++| ++++| ||+++++++|.|||++|+.+++.+++.++. .| ..++|.+++.+|
T Consensus 186 -----Egi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~~~~~~e~~~~v~~l~~ea 257 (346)
T 2rcc_A 186 -----EGLNFYSGFAFFYNLARNQKM---VSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKA 257 (346)
T ss_dssp -----HHTTTHHHHHHHHHHHHTTSS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHCCCc---hhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCChhccHHHHHHHHHHHHHH
Confidence 899999999 45667 999999999999999999999999999886 33 246899999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCCchHHH-hhhh-cCCCCccccccchhhcc
Q psy4803 143 VLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHY--FAENPFDFME-NISL-EGKTNFFERKVGEYQKS 218 (235)
Q Consensus 143 v~iE~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y--~~~np~~w~~-~~~~-~~~~nffe~~~~~Y~~~ 218 (235)
|++|++|+++++|.+++|+|++.|++||+|+||+||.+||++|+| ++.||+|||+ .++. .+++||||+++++|+++
T Consensus 258 v~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~f~~~~~nP~~w~~~~~~~~~~~~nFFe~~~~~Y~~~ 337 (346)
T 2rcc_A 258 ADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKV 337 (346)
T ss_dssp HHHHHHHHHHHTTTCSTTCCHHHHHHHHHHHHHHHHHHTTCCCSCTTCCSCSCTTC------------------------
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhccCccccCCCcCCccccccc
Confidence 999999999999988999999999999999999999999999999 6799999997 4545 67999999999999999
Q ss_pred cccc
Q psy4803 219 SVMA 222 (235)
Q Consensus 219 ~~~~ 222 (235)
+++.
T Consensus 338 ~~~~ 341 (346)
T 2rcc_A 338 SADN 341 (346)
T ss_dssp ----
T ss_pred cCcc
Confidence 7653
No 8
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=100.00 E-value=2.6e-36 Score=267.71 Aligned_cols=145 Identities=16% Similarity=0.203 Sum_probs=104.8
Q ss_pred hhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCC-----------CcHHHHHHHHHHHH
Q psy4803 82 IGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNK-----------PSEERIKSIVLDAV 143 (235)
Q Consensus 82 i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~-----------~~~~~i~~i~~~av 143 (235)
++..|+++| ++++| ||+++++++|.|||++|+.+++.+++.++.+ ...++|++++.+||
T Consensus 204 Egi~FysgF~~~~~l~~~g~m---~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p~~~~~~~~~~~~i~~l~~eav 280 (375)
T 1mxr_A 204 EAIRFYVSFACSFAFAERELM---EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAA 280 (375)
T ss_dssp HHTHHHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHhhHHHHHHHHHHHHHHH
Confidence 899999999 56777 9999999999999999999999999998863 12678899999999
Q ss_pred HHHHHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCCchHHHh-hhh-cCCCCccccccchhhccc
Q psy4803 144 LVEQEFLTEALPV-KLIGMNCDLMKQYIEYVADRLLVDLGCSKHYF-AENPFDFMEN-ISL-EGKTNFFERKVGEYQKSS 219 (235)
Q Consensus 144 ~iE~~f~~~~~~~-~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~-~~np~~w~~~-~~~-~~~~nffe~~~~~Y~~~~ 219 (235)
++|++|++++++. +++|||++.|++||+|+||+||.+||++|+|+ +.||+|||+. ++. ..++||||+++++|++++
T Consensus 281 e~E~~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~rL~~LG~~~~y~~~~nP~~w~~~~~~~~~~~~nFFE~~~t~Y~~~~ 360 (375)
T 1mxr_A 281 QQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 360 (375)
T ss_dssp HHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCSCGGGGGTC---------------------
T ss_pred HHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHhhcccccCCCccCcchhhhcc
Confidence 9999999999986 48999999999999999999999999999996 5999999974 443 457999999999999998
Q ss_pred cccCCCCCce
Q psy4803 220 VMADQDNQVF 229 (235)
Q Consensus 220 ~~~~~~~~~~ 229 (235)
+..+.++++|
T Consensus 361 ~~~~~~~~~~ 370 (375)
T 1mxr_A 361 IDSEVDTDDL 370 (375)
T ss_dssp ----------
T ss_pred ccccCchhhH
Confidence 7744554444
No 9
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=100.00 E-value=7.5e-35 Score=255.55 Aligned_cols=201 Identities=16% Similarity=0.165 Sum_probs=132.6
Q ss_pred chh-hhHHHHHHHhcCcccccccc-cccCChHH--HHHHHHhhhccC-CCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCC
Q psy4803 2 DHT-VDSLLIDTYIKDQEERMTAP-GITRSVCS--LWFEARRGELML-GTDESTFNAILCTRSYPQLAEVFSQYYTLTGH 76 (235)
Q Consensus 2 ~h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~--d~~~l~~a~~~~-g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~ 76 (235)
-|+ +||+++++++ ++.+++.+| .+.+.|+. -+.-+....... ..+...+.+.++ ....+
T Consensus 121 iHs~sYs~il~tl~-~~~e~~~~f~~~~~~p~l~~Ka~~i~~~y~~~~~~~~~~~~~~lv-----a~~~l---------- 184 (350)
T 4dr0_A 121 VHAKSYSNIFMTLA-PTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMV-----ASVYL---------- 184 (350)
T ss_dssp THHHHHHHHHHHHS-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTCCTTCHHHHHHHHH-----HHHHH----------
T ss_pred HHHHHHHHHHHHHc-CchhHHHHHHHHhcCHHHHHHHHHHHHHHHhccCcchHHHHHHHH-----HHHHH----------
Confidence 388 9999999998 567788899 99999981 111111111111 112223444444 22222
Q ss_pred cHHHHhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCc-------HHHHHHHHHHH
Q psy4803 77 ELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPS-------EERIKSIVLDA 142 (235)
Q Consensus 77 ~l~~~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~-------~~~i~~i~~~a 142 (235)
++..|+++| ++++| ||+++++++|.|||++|+.+++.+++.+..+.+ .+++++++++|
T Consensus 185 -----EGi~FysgF~~~~~l~~~g~m---~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~~e~~~~i~~l~~ea 256 (350)
T 4dr0_A 185 -----ESFLFYSGFYYPLYFYGQGKL---MQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQL 256 (350)
T ss_dssp -----HHTTTHHHHHHHHHHHTTTCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHhCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 899999999 56667 999999999999999999999999999988765 34578999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCCchHHHhhhhc-CCCCccccccchhhccc
Q psy4803 143 VLVEQEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFA--ENPFDFMENISLE-GKTNFFERKVGEYQKSS 219 (235)
Q Consensus 143 v~iE~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~--~np~~w~~~~~~~-~~~nffe~~~~~Y~~~~ 219 (235)
|++|++|++++++ .+||++ .|++||+|+||+||.+||++|+|++ .||+ ||++++.. +++||||+|+++|++++
T Consensus 257 ve~E~~~~~~~~~--~iGl~~-~~~~Yi~y~An~~L~~LG~~~~y~~~~~nP~-~~~~~~~~~k~~nFFE~r~t~Y~k~~ 332 (350)
T 4dr0_A 257 YENELEYTEDLYD--QVGLSH-DVKKFIRYNANKALMNLGFDPYFEEEDINPI-VLNGLNTKTKSHDFFSMKGNGYKKAT 332 (350)
T ss_dssp HHHHHHHHHHHHG--GGTCHH-HHHHHHHHHHHHHHHHTTCCCCSCCCCCCHH-HHHTC---------------------
T ss_pred HHHHHHHHHHHHh--cCCcHH-HHHHHHHHHHHHHHHHcCCCCCCCCCCCCch-HHHhcccccCcCCCCcCchhhhhhcc
Confidence 9999999999995 589986 5999999999999999999999975 6998 88877654 56799999999999998
Q ss_pred cccCCCCCceec
Q psy4803 220 VMADQDNQVFRL 231 (235)
Q Consensus 220 ~~~~~~~~~~~~ 231 (235)
+. ...+++|+|
T Consensus 333 ~~-~~~d~d~~f 343 (350)
T 4dr0_A 333 VE-PLKDDDFYF 343 (350)
T ss_dssp ------------
T ss_pred cc-cCCccceec
Confidence 75 357788998
No 10
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=100.00 E-value=2.9e-35 Score=255.75 Aligned_cols=197 Identities=15% Similarity=0.090 Sum_probs=128.7
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++++ +++.+| .+.+.|+...+ ..-..++...+ .+.+.+. ....
T Consensus 101 Hs~sYs~il~tl~~~~-e~~~~f~~i~~~p~l~~K-~~~i~~~~~~~--~~~~~~v-----a~~~--------------- 156 (319)
T 3n37_A 101 HARSYSSIFSTLCQTK-DVDAAYAWSEENAPLQRK-AQIIQQHYRGD--DPLKKKI-----ASVF--------------- 156 (319)
T ss_dssp HHHHHHHHHHHHSCHH-HHHHHHHHHHHCHHHHHH-HHHHHHHHHSS--CHHHHHH-----HHHH---------------
T ss_pred HHHHHHHHHHHHCCCH-HHHHHHHHHhhCHHHHHH-HHHHHHHHcCc--hHHHHHH-----HHHH---------------
Confidence 88 9999999999875 567799 88888871111 11112221111 1222222 1122
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcH-------HHHHHHHHHHHHHH
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSE-------ERIKSIVLDAVLVE 146 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~-------~~i~~i~~~av~iE 146 (235)
.++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.+..+++. ++|++++++||++|
T Consensus 157 lEgi~Fys~F~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~~~~~~~~~e~~~~i~~l~~eave~E 233 (319)
T 3n37_A 157 LESFLFYSGFWLPMYFSSRGKL---TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 (319)
T ss_dssp HHHTTTHHHHHHHHHHHHTTCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCc---hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 2899999999 66777 9999999999999999999999999999987653 45899999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC----CCCchHHHhhhh--cCCCCccccccchhhcccc
Q psy4803 147 QEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFA----ENPFDFMENISL--EGKTNFFERKVGEYQKSSV 220 (235)
Q Consensus 147 ~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~----~np~~w~~~~~~--~~~~nffe~~~~~Y~~~~~ 220 (235)
++|+++++ +++|++++ |++||+|+||+||.+||++|+|++ +||++|+ +++. .+++||||+|+++|+++++
T Consensus 234 ~~~~~~~~--~~iGl~~~-~~~yi~y~An~~L~~lG~~~~f~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~~~Y~~~~~ 309 (319)
T 3n37_A 234 LQYTDELY--AETPWADD-VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA-ALSPNADENHDFFSGSGSSYVMGKA 309 (319)
T ss_dssp HHHHHHHS--TTSSCHHH-HHHHHHHHHHHHHHHTTCCCCSCGGGCCCCHHHHH-HHCC---------------------
T ss_pred HHHHHHHH--hccCcHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcccHH-hhccCccccCCCCCCChhhhhcCCC
Confidence 99999998 58899876 999999999999999999999976 5666555 5554 4899999999999999977
Q ss_pred ccCCCCCceec
Q psy4803 221 MADQDNQVFRL 231 (235)
Q Consensus 221 ~~~~~~~~~~~ 231 (235)
.. .++++|.|
T Consensus 310 ~~-~~d~d~~~ 319 (319)
T 3n37_A 310 VE-TEDEDWNF 319 (319)
T ss_dssp -----------
T ss_pred cc-ccccCCCC
Confidence 54 35555554
No 11
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=100.00 E-value=9.2e-35 Score=253.43 Aligned_cols=197 Identities=14% Similarity=0.083 Sum_probs=128.2
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++++ ++..+| .+.+.|+.. +...-..++...+ .+.+.+. ....
T Consensus 111 Hs~sYs~il~tl~~~~-e~~~~f~~i~~~p~l~-~K~~~i~~~~~~~--~~~~~~v-----a~~~--------------- 166 (329)
T 3dhz_A 111 HAKSYSNIFMTLASTP-QINEAFRWSEENENLQ-RKAKIIMSYYNGD--DPLKKKV-----ASTL--------------- 166 (329)
T ss_dssp HHHHHHHHHHHHSCHH-HHHHHHHHHHHCHHHH-HHHHHHHHHHTSS--CHHHHHH-----HHHH---------------
T ss_pred HHHHHHHHHHHhCCCH-HHHHHHHHHhhCHHHH-HHHHHHHHHHcCC--cHHHHHH-----HHHH---------------
Confidence 88 9999999999875 567799 888888711 1111112222221 1222222 1122
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCc-------HHHHHHHHHHHHHHH
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPS-------EERIKSIVLDAVLVE 146 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~-------~~~i~~i~~~av~iE 146 (235)
.++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.+..+++ .+++++++++||++|
T Consensus 167 lEGi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~~e~~~~~~~l~~eave~E 243 (329)
T 3dhz_A 167 LESFLFYSGFYLPMYLSSRAKL---TNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENE 243 (329)
T ss_dssp HHHTTTHHHHHHHHHHHTTTSS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 2899999999 56677 999999999999999999999999999998765 345889999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC----CCCchHHHhhhh--cCCCCccccccchhhcccc
Q psy4803 147 QEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFA----ENPFDFMENISL--EGKTNFFERKVGEYQKSSV 220 (235)
Q Consensus 147 ~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~----~np~~w~~~~~~--~~~~nffe~~~~~Y~~~~~ 220 (235)
++|+++++ +++|++++ |++||+|+||+||.+||++|+|++ +||++|+ +++. .+++||||+|+++|+++++
T Consensus 244 ~~~~~~~~--~~iGl~~~-~~~yi~y~An~~L~~lG~~~~y~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~t~Y~~~~~ 319 (329)
T 3dhz_A 244 IEYTEDIY--DDLGWTED-VKRFLRYNANKALNNLGYEGLFPTDETKVSPAILS-SLSPNADENHDFFSGSGSSYVIGKA 319 (329)
T ss_dssp HHHHHHHH--TTTTCHHH-HHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHHHH-HHC----------------------
T ss_pred HHHHHHHH--hccCchHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcccHH-HhccCccccCCCCCCChhhhhcCCc
Confidence 99999998 58899876 999999999999999999999976 5665554 5554 5899999999999999977
Q ss_pred ccCCCCCceec
Q psy4803 221 MADQDNQVFRL 231 (235)
Q Consensus 221 ~~~~~~~~~~~ 231 (235)
.. .++++|.|
T Consensus 320 ~~-~~d~d~~~ 329 (329)
T 3dhz_A 320 ED-TTDDDWDF 329 (329)
T ss_dssp -----------
T ss_pred cc-ccccCCCC
Confidence 54 34555554
No 12
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=100.00 E-value=1.1e-34 Score=248.53 Aligned_cols=166 Identities=56% Similarity=0.899 Sum_probs=141.6
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChH----HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCC
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVC----SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGH 76 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~----~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~ 76 (235)
|+ +||++++++++||.+++++| .+.+.|+ .+|. .++.+.+...+.+.++ ....+
T Consensus 108 Hs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~~-----~~~~~~~~~~~~~~lv-----a~~~l---------- 167 (286)
T 3olj_A 108 HSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWA-----LRWIGDKEATYGERVV-----AFAAV---------- 167 (286)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHTHHHHCGGGHHHHHHH-----HHHHHCSSSCHHHHHH-----HHHHH----------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhCHHHHHHHHHH-----HHHHhCChhHHHHHHH-----HHHHH----------
Confidence 88 99999999999999999999 9998888 2221 2222111122333333 22222
Q ss_pred cHHHHhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Q psy4803 77 ELDEAIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEF 149 (235)
Q Consensus 77 ~l~~~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f 149 (235)
++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.++.+++.++|++++++||++|++|
T Consensus 168 -----Egi~f~~~F~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~~~~~~~v~~~~~eave~E~~~ 239 (286)
T 3olj_A 168 -----EGIFFSGSFASIFWLKKRGLM---PGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEF 239 (286)
T ss_dssp -----HHTTTHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 888999999 56677 999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHH
Q psy4803 150 LTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFM 196 (235)
Q Consensus 150 ~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~ 196 (235)
+++++|.+++|||++.|++||+|+||+||.+||++|+|+++||+|||
T Consensus 240 ~~~~l~~~~~Gl~~~~~~~yi~y~An~~L~~lG~~~~f~~~nP~~~m 286 (286)
T 3olj_A 240 LTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFM 286 (286)
T ss_dssp HHTTSCGGGGTCCHHHHHHHHHHHHHHHHHHHTCCCSSCCCCCCTTC
T ss_pred HHHHcCCCcCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Confidence 99999888999999999999999999999999999999999999997
No 13
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=99.97 E-value=3.8e-32 Score=235.12 Aligned_cols=170 Identities=41% Similarity=0.590 Sum_probs=143.2
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||++++++++||.+++++| ++.+.|+.. +...-+.++...++ .+.+.++ ....+
T Consensus 132 Hs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~-~K~~~i~~~~~~~~-~~~~~lv-----a~~~l-------------- 190 (311)
T 2o1z_A 132 HSETYSLLIDNYIKDEKERMNLFHAIENIPAVK-NKALWAAKWINDTN-SFAERIV-----ANACV-------------- 190 (311)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHTTSHHHH-HHHHHHHHHSSTTS-CHHHHHH-----HHHHH--------------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHHH-HHHHHHHHHHcCcc-HHHHHHH-----HHHHH--------------
Confidence 87 99999999999999999999 999999811 11111133433222 2333333 22222
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHhh
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEA 153 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~~~i~~i~~~av~iE~~f~~~~ 153 (235)
++..|+|+| ++++| ||+.+++++|.|||++|+.+++.+++.++.+++.++|.+++.+||++|++|++++
T Consensus 191 -EGi~fysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~~i~~l~~eave~E~~~~~~~ 266 (311)
T 2o1z_A 191 -EGILFSGSFCAIFWFKKQNKL---HGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICES 266 (311)
T ss_dssp -HHTTTHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHTTBTTT
T ss_pred -HHHHHHHHHHHHHHHHHcCCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999 45667 9999999999999999999999999999988899999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHH
Q psy4803 154 LPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFAENPFDFME 197 (235)
Q Consensus 154 ~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~~np~~w~~ 197 (235)
+|.+++|+|++.+++||+|+||++|.+||++|+|+++||+|||+
T Consensus 267 ~~~~~~Gl~~~~~~~yi~y~an~~L~~LG~~~~y~~~nP~~wm~ 310 (311)
T 2o1z_A 267 LPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMD 310 (311)
T ss_dssp BCCTTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCCCTTTT
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCcchhc
Confidence 99889999999999999999999999999999999999999996
No 14
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=99.92 E-value=6.3e-26 Score=194.99 Aligned_cols=157 Identities=15% Similarity=0.050 Sum_probs=122.8
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHH
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDE 80 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~ 80 (235)
|+ +||+++++++++| +++.+| .+.+.|+.. +...-..++...+ .+.+.+. ....
T Consensus 110 Hs~sYs~il~tl~~~~-e~~~~f~~i~~~p~l~-~K~~~i~~~~~~~--~~~~~~v-----a~~~--------------- 165 (296)
T 3mjo_A 110 HAKSYSNIFMTLASTP-QINEAFRWSEENENLQ-RKAKIIMSYYNGD--DPLKKKV-----ASTL--------------- 165 (296)
T ss_dssp HHHHHHHHHHHHSCHH-HHHHHHHHHHHCHHHH-HHHHHHHHHHTSS--CHHHHHH-----HHHH---------------
T ss_pred HHHHHHHHHHHhCCCH-HHHHHHHHHhcCHHHH-HHHHHHHHHhcCC--cHHHHHH-----HHHH---------------
Confidence 88 9999999999876 467799 888888811 1111112222221 1222222 1122
Q ss_pred HhhccchhhH-------HHHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCcH-------HHHHHHHHHHHHHH
Q psy4803 81 AIGREFSGDI-------KEGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSE-------ERIKSIVLDAVLVE 146 (235)
Q Consensus 81 ~i~~~~sg~f-------~~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~~-------~~i~~i~~~av~iE 146 (235)
.++..|+|+| ++++| ||+++++++|.|||++|+.+++.+++.+..+++. +++++++++||++|
T Consensus 166 lEGi~FysgF~~~~~l~~~g~m---~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~~~e~~~~v~~l~~eave~E 242 (296)
T 3mjo_A 166 LESFLFYSGFYLPMYLSSRAKL---TNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENE 242 (296)
T ss_dssp HHHTHHHHHTHHHHHHHHTTSS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHH
Confidence 2899999999 66777 9999999999999999999999999999987653 45889999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy4803 147 QEFLTEALPVKLIGMNCDLMKQYIEYVADRLLVDLGCSKHYFA 189 (235)
Q Consensus 147 ~~f~~~~~~~~~~gl~~~~~~~yi~~~an~~l~~lG~~~~y~~ 189 (235)
++|+++++ +++|++++ |++||+|+||+||.+||++|+|++
T Consensus 243 ~~~~~~~~--~~iGl~~~-~~~yi~y~An~~L~~LG~~~~y~~ 282 (296)
T 3mjo_A 243 IEYTEDIY--DDLGWTED-VKRFLRYNANKALNNLGYEGLFPT 282 (296)
T ss_dssp HHHHHHHH--TTTTCHHH-HHHHHHHHHHHHHHHTTCCCSSCG
T ss_pred HHHHHHHH--hccCcHHH-HHHHHHHHHHHHHHHCCCCCCCCC
Confidence 99999998 48899876 999999999999999999999954
No 15
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=99.87 E-value=1.5e-22 Score=175.86 Aligned_cols=162 Identities=13% Similarity=-0.031 Sum_probs=120.8
Q ss_pred hh-hhHHHHHHHhcCcccccccc-cccCChHHHHH---HHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCc
Q psy4803 3 HT-VDSLLIDTYIKDQEERMTAP-GITRSVCSLWF---EARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHE 77 (235)
Q Consensus 3 h~-~ys~~~~~~~~~~~~~~~i~-~~~~~~~~d~~---~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~ 77 (235)
|+ +||+++++++.|+. +| .+.+.|+...+ .+..... .+....++..+....-+|. .-
T Consensus 113 Hs~sYs~il~tl~~~~~----~f~~~~~~p~lr~k~~~~l~~~~~----------~~~~~~~~~~~~~~lvaf~----~~ 174 (323)
T 3ee4_A 113 HTQVFRMWLDAVGISED----LHRYLDDLPAYRQIFYAELPECLN----------ALSADPSPAAQVRASVTYN----HI 174 (323)
T ss_dssp HHHHHHHHHHHHTCCSC----CGGGGTTCHHHHHHHHTHHHHHHH----------HHHHCCCHHHHHHHHHHHC----CC
T ss_pred HHHHHHHHHHHhCCCHH----HHHHHHcCHHHHHHHHHHHHHHHH----------hhccCCCHHHHHHHHHHHH----HH
Confidence 88 99999999998874 88 88888872111 1111111 1111222222111111111 00
Q ss_pred HHHHhhccchhhHH--------HHHHhhccccccccchhhhcccchhhHHHHHHHHHhCCCc------HHHHHHHHHHHH
Q psy4803 78 LDEAIGREFSGDIK--------EGLIAISPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKPS------EERIKSIVLDAV 143 (235)
Q Consensus 78 l~~~i~~~~sg~f~--------~~ll~l~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~~------~~~i~~i~~~av 143 (235)
.++..|+++|. +++| ||+.+++++|.|||++|+.+++.+++.++.+.+ +++|.+++.+||
T Consensus 175 ---lEGi~FysgF~~~~~~l~~rg~m---~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e~p~~~~~~~~~v~el~~eav 248 (323)
T 3ee4_A 175 ---VEGMLALTGYYAWHKICVERAIL---PGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLAL 248 (323)
T ss_dssp ---CCTTHHHHHHHHHHHHHTTTTCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHhCCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhhHHHHHHHHHHHHHHH
Confidence 27888999984 3444 999999999999999999999999999986543 588999999999
Q ss_pred HHHHHHHHhhcCCCCC-CCCHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy4803 144 LVEQEFLTEALPVKLI-GMNCDLMKQYIEYVADRLLVDLGCSKHYFA 189 (235)
Q Consensus 144 ~iE~~f~~~~~~~~~~-gl~~~~~~~yi~~~an~~l~~lG~~~~y~~ 189 (235)
++ ++|+.+++|.+++ |||+++|++||+|+||+||.+||+++.|++
T Consensus 249 e~-~e~~~~~~~~~~~lGl~~~~~~~Yi~y~AnrrL~~LG~~~~f~~ 294 (323)
T 3ee4_A 249 RL-IEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPV 294 (323)
T ss_dssp HH-HHHHHHTTTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCG
T ss_pred HH-HHHHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCH
Confidence 99 9999999987775 999999999999999999999999999964
No 16
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.61 E-value=1.6e-15 Score=131.75 Aligned_cols=108 Identities=17% Similarity=0.093 Sum_probs=96.1
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI-- 97 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l-- 97 (235)
.++ .+..+|. .||..|++|++|+||||.++++|||+||+.|++.|.++|+..||++|++++++++||+|+++++++
T Consensus 8 t~~~~~~~~~~~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~aY~~~y~~~L~~dl~se~sG~f~~ll~~l~~ 87 (321)
T 1n00_A 8 TLTVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERLVLLWAL 87 (321)
T ss_dssp CCCCCSSCCCHHHHHHHHHHHTSSSSCCHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHHHHSCHHHHHHHHHHHS
T ss_pred CeeecCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHHHhcCchHHHHHHHHcC
Confidence 453 5555555 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhcccchhhHHHHHHHHHhCCC
Q psy4803 98 SPLTNYKPGFGLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 98 ~~~~~~a~~li~~de~~ht~~~~ll~~~L~~~~ 130 (235)
.|...+|..+..++++.+|++.. ++.+|..+.
T Consensus 88 ~~~~~dA~~l~~A~kg~Gtde~~-lieIL~tRs 119 (321)
T 1n00_A 88 DPAERDALLANEATKRWTSSNQV-LMEIACTRS 119 (321)
T ss_dssp CHHHHHHHHHHHHHSSSCSSCHH-HHHHHHSSC
T ss_pred ChhHHHHHHHHHHhhccCCCHHH-HHHHHhcCC
Confidence 47778999999999999999876 457777653
No 17
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.61 E-value=2.3e-15 Score=130.72 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=95.8
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++++|||+.++++|||+||+.|+++|+++|++.||++|++++..++||+|+++|++++.
T Consensus 80 ~ll~~l~~~~~~~dA~~l~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~~g~~Le~dI~~e~sG~~~~~L~~lv~ 159 (321)
T 1n00_A 80 RLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVS 159 (321)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHSSSCSSCHHHHHHHHSSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHcCChhHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhccCcHHHHHHHHHHh
Confidence 355 7777766 99999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred ccccccchhhhcccchhhHHHHHHHHHhCC-CcHHHHHHHH-----HHHHHHHHHHHH
Q psy4803 100 LTNYKPGFGLIMCGLHCEFACLMFKHLVNK-PSEERIKSIV-----LDAVLVEQEFLT 151 (235)
Q Consensus 100 ~~~~a~~li~~de~~ht~~~~ll~~~L~~~-~~~~~i~~i~-----~~av~iE~~f~~ 151 (235)
+....... .|......++..|++.+.++ ++.+.+++|+ .++..+-.+|.+
T Consensus 160 ~~r~~~~~--vd~~~~~~dA~~L~~A~~g~~gtde~lirIl~~Rs~~~L~~I~~~Y~~ 215 (321)
T 1n00_A 160 SYRYEGEE--VNMTLAKTEAKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKN 215 (321)
T ss_dssp CCCCCSCC--CCHHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred cccCCCcC--CChhhhHHHHHHHHHHhhCcCCCcHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 43222111 13333455666666666653 3333355555 245555555554
No 18
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.60 E-value=2.4e-15 Score=130.29 Aligned_cols=99 Identities=25% Similarity=0.330 Sum_probs=90.8
Q ss_pred HHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccchh
Q psy4803 31 CSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGFG 108 (235)
Q Consensus 31 ~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~li 108 (235)
..||+.|++|++|+||||.++++|||+||+.|++.|.++|+.+||++|++++++++||+|+++++++ .|..++|..+.
T Consensus 15 ~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~yg~~L~~dl~se~sG~f~~ll~~l~~~~~~~dA~~L~ 94 (315)
T 1dm5_A 15 REDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLH 94 (315)
T ss_dssp HHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCHHHHHHhhcCccHHHHHHHHccChhHHHHHHHH
Confidence 3999999999999999999999999999999999999999999999999999999999999999999 46678999999
Q ss_pred hhcccchhhHHHHHHHHHhCCC
Q psy4803 109 LIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 109 ~~de~~ht~~~~ll~~~L~~~~ 130 (235)
.++++.+|++.. ++.+|..+.
T Consensus 95 ~A~kg~Gtde~~-lieIL~tRs 115 (315)
T 1dm5_A 95 AAMKGLGTDKNA-LIDILCTQS 115 (315)
T ss_dssp HHHHSSSCCHHH-HHHHHSSCC
T ss_pred HHhhcCCCchhh-hhhhHhcCC
Confidence 999999999876 457776653
No 19
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.60 E-value=2.4e-15 Score=130.73 Aligned_cols=100 Identities=19% Similarity=0.229 Sum_probs=91.2
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..||+.|++|++|+||||.++++|||+||+.|++.|.++|+.+||++|++++++++||+|+++++++ .|..++|..+
T Consensus 23 ~~~DA~~L~kA~kG~GtdE~~lieIL~~Rs~~q~~~I~~aY~~~yg~~L~~dlkse~sG~f~~ll~~l~~~~~~~DA~~L 102 (327)
T 1w3w_A 23 PDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYRYEAKEL 102 (327)
T ss_dssp CHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHHHHcCCcHHHHHHHhcCCHHHHHHHHH
Confidence 44999999999999999999999999999999999999999999999999999999999999999988 4667899999
Q ss_pred hhhcccchhhHHHHHHHHHhCCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~~ 130 (235)
..++++.+|++..+ +.+|..+.
T Consensus 103 ~~A~~g~Gtde~~l-ieIL~tRs 124 (327)
T 1w3w_A 103 HDAMKGLGTKEGVI-IEILASRT 124 (327)
T ss_dssp HHHHHSSSCCHHHH-HHHHHHSC
T ss_pred HHHhhccCCCHHHH-HHHHHhCC
Confidence 99999999998764 46776553
No 20
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.59 E-value=3.8e-15 Score=128.96 Aligned_cols=105 Identities=21% Similarity=0.195 Sum_probs=85.5
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++++|||+..+++|||+||+.|+++|+++|++.||++|++++..++||+|+++|++++.
T Consensus 76 ~ll~~l~~~~~~~dA~~L~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~~Le~dI~~e~sG~~~~~L~~lv~ 155 (315)
T 1dm5_A 76 AAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQ 155 (315)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHSSSCCHHHHHHHHSSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHccChhHHHHHHHHHHhhcCCCchhhhhhhHhcCCHHHHHHHHHHHHHHhCccHHHHHHhccCchHHHHHHHHHc
Confidence 355 7777776 99999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred cc-------------ccccchhhhccc-chhhHHHHHHHHHh
Q psy4803 100 LT-------------NYKPGFGLIMCG-LHCEFACLMFKHLV 127 (235)
Q Consensus 100 ~~-------------~~a~~li~~de~-~ht~~~~ll~~~L~ 127 (235)
+. .+|..|+.++++ .+|+...+ .++|.
T Consensus 156 ~~r~~~~~vd~~~a~~dA~~L~~A~~~~~GTde~~l-irIl~ 196 (315)
T 1dm5_A 156 GGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRF-NAVLA 196 (315)
T ss_dssp TCCCTTCCCCHHHHHHHHHHHHHHTTTSSSCCHHHH-HHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhCcCCCcHHHH-HHHHH
Confidence 33 335555555555 45554432 34444
No 21
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.59 E-value=4.1e-15 Score=129.07 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=92.6
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++++||||..+++|||+||+.|+++|+++|++.||++|++++..++||+|+++|++++.
T Consensus 78 ~ll~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~l~~ 157 (320)
T 1yii_A 78 TLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQ 157 (320)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHccChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHHhhcCCcHHHHHHHHHh
Confidence 455 7777766 99999999999999999999999999999999999999999999999999999999999999998855
Q ss_pred ccccccchhhhcccchhhHHHHHHHHHhC-CCcHHH-HHHHHH-----HHHHHHHHHH
Q psy4803 100 LTNYKPGFGLIMCGLHCEFACLMFKHLVN-KPSEER-IKSIVL-----DAVLVEQEFL 150 (235)
Q Consensus 100 ~~~~a~~li~~de~~ht~~~~ll~~~L~~-~~~~~~-i~~i~~-----~av~iE~~f~ 150 (235)
+....... -|......++..|++.+.+ .++.+. +++|+. ++..+..+|.
T Consensus 158 ~~r~~~~~--vd~~~a~~dA~~L~~A~~~~~Gtde~~li~Il~tRs~~~L~~i~~~Y~ 213 (320)
T 1yii_A 158 ANRDPDGR--VDEALVEKDAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYM 213 (320)
T ss_dssp TCCCCSCC--CCHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred hccCcccc--CCchHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 43321111 1223334445555655553 333322 355552 4444444443
No 22
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.59 E-value=2.4e-15 Score=129.77 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=92.3
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..|++.|++|++|+||||..+++||++||+.|++.|..+|+.+||++|.+.+++++||+|+++++++ .|..++|..+
T Consensus 4 ~~~Da~~L~kA~kg~Gtde~~ii~IL~~rs~~qr~~I~~~Y~~~~g~dL~~~lk~elsG~fe~~l~~l~~~~~~~DA~~L 83 (308)
T 2hyv_A 4 AERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASEL 83 (308)
T ss_dssp HHHHHHHHHHHHHSTTCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHHHcCCCHHHHHHHHcCCcHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999988 5788999999
Q ss_pred hhhcccchhhHHHHHHHHHhCCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~~ 130 (235)
..+++|.+|+... |+.+|..+.
T Consensus 84 ~~AmkG~Gtde~~-LieIL~~Rs 105 (308)
T 2hyv_A 84 KASMKGLGTDEDS-LIEIICSRT 105 (308)
T ss_dssp HHHTSTTCCCHHH-HHHHHHHCC
T ss_pred HHHhhcCCCCHHH-HHHHHhcCC
Confidence 9999999999876 457777653
No 23
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.58 E-value=3.7e-15 Score=129.37 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=91.5
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..||+.|++|++|+||||..+++||++||+.|++.|..+|+.+||++|++++++++||+|+++++++ .|...+|..+
T Consensus 16 ~~~Da~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~~g~~L~~dl~~e~sG~f~~ll~~l~~~~~~~DA~~L 95 (320)
T 1yii_A 16 ARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSLMRPARIFDAHAL 95 (320)
T ss_dssp HHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCchHHHHHHHHccChHHHHHHHH
Confidence 44999999999999999999999999999999999999999999999999999999999999999988 4677899999
Q ss_pred hhhcccchhhHHHHHHHHHhCCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~~ 130 (235)
..++++.+|++..+ +.+|..+.
T Consensus 96 ~~A~kg~Gtde~~l-ieIL~~Rs 117 (320)
T 1yii_A 96 KHAIKGAGTNEKVL-TEILASRT 117 (320)
T ss_dssp HHHHSSSSCCHHHH-HHHHHHSC
T ss_pred HHHhccCCCchHHH-hHHHhcCC
Confidence 99999999998764 47777653
No 24
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.58 E-value=3.8e-15 Score=129.37 Aligned_cols=100 Identities=20% Similarity=0.236 Sum_probs=91.9
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..|++.|++|++|+||||..+++||++||+.|++.|..+|+.+||++|.+.+++++||+|+++++++ .|..++|..+
T Consensus 20 ~~~Da~~L~kA~kG~Gtde~~li~IL~~rs~~qr~~I~~~Y~~~~g~dL~~~lk~elsG~fe~~l~~l~~~p~~~DA~~L 99 (323)
T 1axn_A 20 PSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQL 99 (323)
T ss_dssp HHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCccHHHHHHHHhcCchHHHHHHH
Confidence 33899999999999999999999999999999999999999999999999999999999999999988 5777899999
Q ss_pred hhhcccchhhHHHHHHHHHhCCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~~ 130 (235)
..+++|.+|++.. |+.+|..+.
T Consensus 100 ~~A~kG~Gtde~~-lieIL~~Rs 121 (323)
T 1axn_A 100 KKSMKGAGTNEDA-LIEILTTRT 121 (323)
T ss_dssp HHHHCSSSCCHHH-HHHHHHHSC
T ss_pred HHHhccCCCCHHH-HhHHhcCCC
Confidence 9999999999876 457777653
No 25
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.57 E-value=4.2e-15 Score=130.09 Aligned_cols=99 Identities=23% Similarity=0.292 Sum_probs=92.0
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..||+.|++|++|+|+||..+++||++||+.|++.|..+|+.+||++|.+.+++++||+|+++++++ .|..++|..+
T Consensus 44 ~~~Da~~L~kA~kg~GtDE~~iI~IL~~rs~~Qr~~I~~~Y~~~~g~dL~~~lkselsG~fe~~l~~l~~~p~~~DA~~L 123 (346)
T 1hm6_A 44 PSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALALLKTPAQFDADEL 123 (346)
T ss_dssp HHHHHHHHHHHHSSTTCCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCccHHHHHHHhcCccHHHHHHHHhCCcHHHHHHHH
Confidence 34999999999999999999999999999999999999999999999999999999999999999988 6888999999
Q ss_pred hhhcccchhhHHHHHHHHHhCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNK 129 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~ 129 (235)
..+++|.||++.. |+.+|..+
T Consensus 124 ~~AmkG~GTde~~-LieIL~~R 144 (346)
T 1hm6_A 124 RAAMKGLGTDEDT-LNEILASR 144 (346)
T ss_dssp HHHHSSSCCCHHH-HHHHHHHS
T ss_pred HHHhhccCCCHHH-HHHHHhcC
Confidence 9999999999876 45777655
No 26
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.57 E-value=1.1e-14 Score=126.34 Aligned_cols=79 Identities=23% Similarity=0.238 Sum_probs=73.1
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++++||||..+++|||+||+.|+++|.++|+.+||++|++++.+++||+|+++|++++.
T Consensus 81 ~~l~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~ll~ 160 (322)
T 2zhj_A 81 QVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTA 160 (322)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhhcCchHHHHHHHHHh
Confidence 455 7777766 99999999999999999999999999999999999999999999999999999999999999998854
Q ss_pred c
Q psy4803 100 L 100 (235)
Q Consensus 100 ~ 100 (235)
+
T Consensus 161 ~ 161 (322)
T 2zhj_A 161 G 161 (322)
T ss_dssp C
T ss_pred h
Confidence 3
No 27
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.57 E-value=6.1e-15 Score=128.06 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=91.5
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..||+.|++|++|+||||..+++||++||+.|++.|..+|+.+||++|.+++++++||+|+++++++ .|...+|..+
T Consensus 19 ~~~Da~~L~kA~kG~GtdE~~li~IL~~rs~~qr~~I~~~Y~~~~g~~L~~~lkselsG~fe~~l~~l~~~~~~~DA~~L 98 (322)
T 2zhj_A 19 ATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGMMTPTVLYDVQEL 98 (322)
T ss_dssp HHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHCSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCchHHHHHHhhcCccHHHHHHHHcCCcHHHHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999988 4677899999
Q ss_pred hhhcccchhhHHHHHHHHHhCCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~~ 130 (235)
..+++|.+|++.. ++.+|..+.
T Consensus 99 ~~A~kg~Gtde~~-lieIL~~Rs 120 (322)
T 2zhj_A 99 RRAMKGAGTDEGC-LIEILASRN 120 (322)
T ss_dssp HHHHSSSCCCHHH-HHHHHHHSC
T ss_pred HHhhhccCCCHHH-HHHHHhcCC
Confidence 9999999999876 457776653
No 28
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.56 E-value=1.8e-14 Score=125.16 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=87.4
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++|+||||..+++|||+||+.|+++|.++|+.+||++|++++.+++||+|+++++++..
T Consensus 82 ~~l~~l~~~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~se~sG~~~~ll~~l~~ 161 (323)
T 1axn_A 82 HLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLAD 161 (323)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHhcCchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHHHhcCcHHHHHHHHHHh
Confidence 355 6667766 99999999999999999999999999999999999999999999999999999999999999999843
Q ss_pred c-------------cccccchhhhcc-cchhhHHHHHHHHHhC
Q psy4803 100 L-------------TNYKPGFGLIMC-GLHCEFACLMFKHLVN 128 (235)
Q Consensus 100 ~-------------~~~a~~li~~de-~~ht~~~~ll~~~L~~ 128 (235)
+ ..+|..|..+.+ +.+|++..+ +++|..
T Consensus 162 ~~R~e~~~vd~~~a~~DA~~L~~A~~~~~Gtde~~l-i~Il~t 203 (323)
T 1axn_A 162 GRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKF-TEILCL 203 (323)
T ss_dssp TCSCCCSCCCHHHHHHHHHHHHHHTTTSSSCCHHHH-HHHHHH
T ss_pred cccccCCCCCccHHHHHHHHHHHHhccCCCCCHHHH-HHHHHh
Confidence 2 355666666664 466665543 345544
No 29
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.55 E-value=1.6e-14 Score=125.52 Aligned_cols=95 Identities=24% Similarity=0.397 Sum_probs=86.5
Q ss_pred HHHHHHHhhhc-cCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh-----cccccccc
Q psy4803 32 SLWFEARRGEL-MLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI-----SPLTNYKP 105 (235)
Q Consensus 32 ~d~~~l~~a~~-~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l-----~~~~~~a~ 105 (235)
.||+.|+.|++ ++|||+..|++||++||..|++.|+.+|+++||++|+++|+.++||+|+++|+++ +|+.++|.
T Consensus 181 ~DA~~L~~A~~~~~GTde~~lirIl~tRs~~~L~~i~~~Y~~~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~fA~ 260 (327)
T 1w3w_A 181 QDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHSYFAE 260 (327)
T ss_dssp HHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhhCcCCCcHhHhhHHHhcCCHHHHHHHHHHHHHHHCCCHHHHHhhhcCCcHHHHHHHHHHHcCCHHHHHHH
Confidence 78999999875 7899999999999999999999999999999999999999999999999999998 47788999
Q ss_pred chhhhcccchhhHHHHHHHHHh
Q psy4803 106 GFGLIMCGLHCEFACLMFKHLV 127 (235)
Q Consensus 106 ~li~~de~~ht~~~~ll~~~L~ 127 (235)
.|..+++|.+|+...++ +.++
T Consensus 261 ~L~~amkg~GTdd~~Li-riiv 281 (327)
T 1w3w_A 261 RLYYAMKGAGTRDGTLI-RNIV 281 (327)
T ss_dssp HHHHHHSSSSCCHHHHH-HHHH
T ss_pred HHHhhccCCCCChhHee-eeee
Confidence 99999999999876644 5665
No 30
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.54 E-value=5.3e-14 Score=123.07 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=92.0
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhhcc
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l~~ 99 (235)
+++ ++..+|. .||..|++|++|+|||+..+++|||+||+.|+++|.++|+..||++|++++++++||+|++.++++..
T Consensus 106 ~~l~~l~~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~se~sG~f~~ll~~L~~ 185 (346)
T 1hm6_A 106 EVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAK 185 (346)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHhCCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHhhccCCcHHHHHHHHhh
Confidence 355 7777766 99999999999999999999999999999999999999999999999999999999999999998854
Q ss_pred ccccccchhhhcccchhhHHHHHHHHHhC-CCcHHH-HHHHH-----HHHHHHHHHHH
Q psy4803 100 LTNYKPGFGLIMCGLHCEFACLMFKHLVN-KPSEER-IKSIV-----LDAVLVEQEFL 150 (235)
Q Consensus 100 ~~~~a~~li~~de~~ht~~~~ll~~~L~~-~~~~~~-i~~i~-----~~av~iE~~f~ 150 (235)
+...-..- .|....-..+..|++++.+ .++.+. +++|+ .+...+-..|.
T Consensus 186 ~~R~e~~~--vd~~~a~~DA~~L~~A~~~~~Gtde~~li~IL~tRS~~~L~~i~~~Y~ 241 (346)
T 1hm6_A 186 GDRSEDLA--INDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYS 241 (346)
T ss_dssp TCCCCCCS--CCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred ccccccCC--CCchHHHHHHHHHHHHHhccCCCcHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 33211110 1223333445555555532 233333 35555 24444444554
No 31
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.54 E-value=4.2e-15 Score=128.45 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=87.3
Q ss_pred hHHHHHHHHhhhcc-CCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccc-hhhHHHHHHhh-----ccccc
Q psy4803 30 VCSLWFEARRGELM-LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREF-SGDIKEGLIAI-----SPLTN 102 (235)
Q Consensus 30 ~~~d~~~l~~a~~~-~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~-sg~f~~~ll~l-----~~~~~ 102 (235)
+..||+.|++|.++ +|||++.|++||++||+.|+++|+++|++.||++|+++|+.++ ||+|+++|+++ +|+.+
T Consensus 156 a~~DA~~L~~A~~~~~Gtde~~~i~Il~~Rs~~~L~~i~~~Y~~~~g~~l~~~I~~e~~sG~~~~~Ll~iv~~~~~~~~~ 235 (310)
T 2ii2_A 156 VASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHYYNLAPARA 235 (310)
T ss_dssp HHHHHHHHHHHHTTSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhhcccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCccHHHHHHHHHHHhCCHHHH
Confidence 33899999888865 8999999999999999999999999999999999999999999 99999999998 47889
Q ss_pred cccchhhhcccch--hhHHHHHHHHHh
Q psy4803 103 YKPGFGLIMCGLH--CEFACLMFKHLV 127 (235)
Q Consensus 103 ~a~~li~~de~~h--t~~~~ll~~~L~ 127 (235)
+|..|..+++|.+ |+...+ .+++.
T Consensus 236 fA~~L~~Am~g~Gt~td~~~l-~Riv~ 261 (310)
T 2ii2_A 236 VAYAFHSAVETQNDDMAYEQA-ARITG 261 (310)
T ss_dssp HHHHHHHHHTCSCHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHhCCCCCCcHHHH-HHHHH
Confidence 9999999999999 776654 47765
No 32
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.53 E-value=2.4e-14 Score=123.59 Aligned_cols=96 Identities=21% Similarity=0.284 Sum_probs=85.4
Q ss_pred HHHHHHHhh-hccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh-----cccccccc
Q psy4803 32 SLWFEARRG-ELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI-----SPLTNYKP 105 (235)
Q Consensus 32 ~d~~~l~~a-~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l-----~~~~~~a~ 105 (235)
.||..|++| .+++|||+.+|++|||+||++|+++|+++|++.||++|+++|..++||+|+++|+++ +|+.++|.
T Consensus 162 ~DA~~L~~A~~~~~Gtde~~li~Il~~RS~~~L~~i~~~Y~~~~g~~Le~~I~~e~sG~~~~~L~~lv~~~~~~~~~~A~ 241 (308)
T 2hyv_A 162 QDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFAD 241 (308)
T ss_dssp HHHHHHHHTTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHTTTCSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHCcCHHHHHHHhcCchHHHHHHHHHhccCCCcHHHHH
Confidence 899999999 578999999999999999999999999999999999999999999999999999998 46677888
Q ss_pred chhhhcccchhhHHHHHHHHHhC
Q psy4803 106 GFGLIMCGLHCEFACLMFKHLVN 128 (235)
Q Consensus 106 ~li~~de~~ht~~~~ll~~~L~~ 128 (235)
.|+.++++.+|+...+ .++|..
T Consensus 242 ~L~~A~~g~GTde~~l-irilv~ 263 (308)
T 2hyv_A 242 RLYDSMKGKGTRDKVL-IRIMVS 263 (308)
T ss_dssp HHHHHHSSSSCCHHHH-HHHHHH
T ss_pred HHHHHhccCCCCHHHH-HHHHHh
Confidence 8888888888887654 466653
No 33
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.50 E-value=1.6e-13 Score=117.76 Aligned_cols=78 Identities=10% Similarity=-0.053 Sum_probs=72.2
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccc--hhhHHHHHHhh
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREF--SGDIKEGLIAI 97 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~--sg~f~~~ll~l 97 (235)
+++ ++..+|. .||..|++|++|. ||+..+++|||+||+.|+++|+++|+..||++|++++..++ ||+|+++|+++
T Consensus 65 ~~l~~l~~~~~~~dA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~~e~~~sG~~~~~L~~l 143 (295)
T 4evf_A 65 SLLMDLFSDRHEVRAQHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKW 143 (295)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHH
T ss_pred HHHHHHccCchHHHHHHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHHhhcccCCcHHHHHHHH
Confidence 456 7777777 9999999999998 99999999999999999999999999999999999999999 99999999998
Q ss_pred ccc
Q psy4803 98 SPL 100 (235)
Q Consensus 98 ~~~ 100 (235)
+.+
T Consensus 144 l~~ 146 (295)
T 4evf_A 144 MAH 146 (295)
T ss_dssp HHT
T ss_pred Hhc
Confidence 544
No 34
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.48 E-value=1.8e-14 Score=125.69 Aligned_cols=95 Identities=13% Similarity=0.116 Sum_probs=85.0
Q ss_pred HHHHHHHhhhcc---CCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhC-CcHHHHhhccchhhHHHHHHhh-----ccccc
Q psy4803 32 SLWFEARRGELM---LGTDESTFNAILCTRSYPQLAEVFSQYYTLTG-HELDEAIGREFSGDIKEGLIAI-----SPLTN 102 (235)
Q Consensus 32 ~d~~~l~~a~~~---~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g-~~l~~~i~~~~sg~f~~~ll~l-----~~~~~ 102 (235)
.||+.|++|.++ +|||++.|++||++||++|+++|+++|++.|| ++|+++|+.++||+|+++|+++ +|+.+
T Consensus 167 ~DA~~L~~A~~~~gt~gtde~~~i~IL~~RS~~~L~~i~~~Y~~~~g~~~le~~I~~e~sG~~~~~L~~~v~~~~~~~~~ 246 (337)
T 3chj_A 167 EDLVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVEDEFQGLDEYAFKLAHDFLYDPCCA 246 (337)
T ss_dssp HHHHHHHHHHHSSSCCGGGHHHHHHHHHHCCHHHHHHHHHHHHHHTTTCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCCHHHHHHHhcCchHHHHHHHHHHhhcChHHH
Confidence 899999999866 79999999999999999999999999999998 9999999999999999999988 57788
Q ss_pred cccchhhhcccchhhHHHHHHHHHhC
Q psy4803 103 YKPGFGLIMCGLHCEFACLMFKHLVN 128 (235)
Q Consensus 103 ~a~~li~~de~~ht~~~~ll~~~L~~ 128 (235)
+|..+..+++|.+| ... +++.++.
T Consensus 247 ~A~~L~~am~g~GT-d~~-Liriivs 270 (337)
T 3chj_A 247 AAFSMNVAFAGSGS-DSN-RLNRITA 270 (337)
T ss_dssp HHHHHHHHTCSSSC-CHH-HHHHHHH
T ss_pred HHHHHHHHhcCCCc-hhh-Hhhhhhc
Confidence 99999999999988 444 4455554
No 35
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.47 E-value=9e-14 Score=130.87 Aligned_cols=98 Identities=22% Similarity=0.244 Sum_probs=91.6
Q ss_pred HHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccchh
Q psy4803 31 CSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGFG 108 (235)
Q Consensus 31 ~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~li 108 (235)
..|++.|++|++|+|+||..+++||++||+.|++.|..+|+.+||++|.+.+++++||+|+++++++ .|..++|..+.
T Consensus 365 ~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~~~Y~~~~gkdL~~~LkselsG~fe~~i~~l~~~p~~~DA~~l~ 444 (672)
T 1m9i_A 365 DADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLK 444 (672)
T ss_dssp HHHHHHHHHHHSSSSCCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCTHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCchHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999999999999999988 57889999999
Q ss_pred hhcccchhhHHHHHHHHHhCC
Q psy4803 109 LIMCGLHCEFACLMFKHLVNK 129 (235)
Q Consensus 109 ~~de~~ht~~~~ll~~~L~~~ 129 (235)
.+++|.+|++..+ ..+|+.+
T Consensus 445 ~A~kg~gTde~~L-iEIL~tR 464 (672)
T 1m9i_A 445 KAMEGAGTDEKAL-IEILATR 464 (672)
T ss_dssp HHHSSSSCCHHHH-HHHHHHS
T ss_pred HHHhccCCCHHHH-HHhhhcC
Confidence 9999999998764 5777765
No 36
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.47 E-value=9.9e-14 Score=130.59 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=92.0
Q ss_pred hHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccch
Q psy4803 30 VCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGF 107 (235)
Q Consensus 30 ~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~l 107 (235)
|..|++.|++|++|+||||..+++||++||+.|++.|..+|+.+||++|.+.+++++||+|+++++++ .|..++|..+
T Consensus 21 ~~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~~~Y~~~~gkdL~~~LkselsG~fe~~l~~l~~~p~~~dA~~l 100 (672)
T 1m9i_A 21 PNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEI 100 (672)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHH
Confidence 33899999999999999999999999999999999999999999999999999999999999999988 5788999999
Q ss_pred hhhcccchhhHHHHHHHHHhCC
Q psy4803 108 GLIMCGLHCEFACLMFKHLVNK 129 (235)
Q Consensus 108 i~~de~~ht~~~~ll~~~L~~~ 129 (235)
..+++|.+|++..+ +.+|+.+
T Consensus 101 ~~A~kG~gTde~~L-iEIl~tR 121 (672)
T 1m9i_A 101 KDAISGIGTDEKCL-IEILASR 121 (672)
T ss_dssp HHHHSSSSCCHHHH-HHHHHHC
T ss_pred HHHhcCCCCchHHH-HHHHHcC
Confidence 99999999998765 4777765
No 37
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.47 E-value=5.8e-14 Score=122.42 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=89.9
Q ss_pred HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchhhHHHHHHhh--ccccccccchhh
Q psy4803 32 SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI--SPLTNYKPGFGL 109 (235)
Q Consensus 32 ~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg~f~~~ll~l--~~~~~~a~~li~ 109 (235)
.|++.|++|++++ +||..+++||++||+.|+++|+.+|+..||++|.+++++++||+|+++++++ .|..++|..+..
T Consensus 14 ~da~~L~kA~kg~-~de~~ii~IL~~rs~~Qr~~i~~~Y~~~~g~dL~~~lk~e~sG~fe~~l~~l~~~p~~~dA~~L~~ 92 (337)
T 3chj_A 14 AVVQKVVEACQDE-SKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKHLSKDFESLVLMLYKPRAQLLCELIRG 92 (337)
T ss_dssp HHHHHHHHHHHCG-GGTTHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHTTSCHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHHhcCccHHHHHHHHhCChHHHHHHHHHH
Confidence 7899999999998 6999999999999999999999999999999999999999999999999998 688899999999
Q ss_pred hcccchhhHHHHHHHHHhCCC
Q psy4803 110 IMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 110 ~de~~ht~~~~ll~~~L~~~~ 130 (235)
+++|.+|++..+ +++|..+.
T Consensus 93 AmkG~GTde~~L-ieIl~tRs 112 (337)
T 3chj_A 93 ATKGAGTDEKCL-VDVLLTIE 112 (337)
T ss_dssp HHSSSSCCHHHH-HHHHTTSC
T ss_pred hccCCCCChHHh-hhhhhcCC
Confidence 999999998764 57887654
No 38
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.46 E-value=2e-13 Score=117.94 Aligned_cols=106 Identities=5% Similarity=-0.096 Sum_probs=87.6
Q ss_pred ccc-cccCChH-HHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccchh--hHHHHHHhh
Q psy4803 22 TAP-GITRSVC-SLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSG--DIKEGLIAI 97 (235)
Q Consensus 22 ~i~-~~~~~~~-~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~sg--~f~~~ll~l 97 (235)
+++ ++..+|. .||..|++|+++. ||+..+++|||+||+.|+++|+++|+..||++|++++..++|| +|++.|+++
T Consensus 67 ~~l~~l~~~p~~~DA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~~e~sg~~~~~~ll~~l 145 (310)
T 2ii2_A 67 DVMALGWDCNISARVNVIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLA 145 (310)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSCSHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHhhcCCchHHHHHHHHH
Confidence 455 7777776 9999999999998 9999999999999999999999999999999999999999999 999999998
Q ss_pred cccc--------ccccchhhhccc-chhhHHHHHHHHHhCC
Q psy4803 98 SPLT--------NYKPGFGLIMCG-LHCEFACLMFKHLVNK 129 (235)
Q Consensus 98 ~~~~--------~~a~~li~~de~-~ht~~~~ll~~~L~~~ 129 (235)
+.+. .+|..|+.+.++ .+|+... ++++|..+
T Consensus 146 l~~~R~e~~~a~~DA~~L~~A~~~~~Gtde~~-~i~Il~~R 185 (310)
T 2ii2_A 146 IRENRTPRGSVASDAEVLKHNLIDADEPDHEA-VVRLIITS 185 (310)
T ss_dssp HHCCCCCCSCHHHHHHHHHHHHTTSSSCCHHH-HHHHHHHC
T ss_pred HhccCCcchHHHHHHHHHHHHhhcccCCCHHH-HHHHHHhC
Confidence 5432 456667777766 5666544 33555443
No 39
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.45 E-value=2.5e-13 Score=116.57 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=87.9
Q ss_pred ChHHHHHHHHhhhccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhhCCcHHHHhhccc-hhhHHHHHHhh--cccccccc
Q psy4803 29 SVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREF-SGDIKEGLIAI--SPLTNYKP 105 (235)
Q Consensus 29 ~~~~d~~~l~~a~~~~g~de~~~~~iL~~rs~~~l~~i~~~y~~~~g~~l~~~i~~~~-sg~f~~~ll~l--~~~~~~a~ 105 (235)
+|..||..|++|++| |||..+++||++||+.|++.|..+|+..||++|++++++++ ||+|+++++++ .|..++|.
T Consensus 3 ~~~~da~~L~~A~kG--tde~~li~IL~~rs~~qr~~I~~~Y~~~yg~~L~~~lk~el~sG~f~~~l~~l~~~~~~~dA~ 80 (295)
T 4evf_A 3 KVTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGGSEESLLMDLFSDRHEVRAQ 80 (295)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHSCCSHHHHHHHHHTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHhCCCHHHHHHHHHHHHHHHCcCHHHHHHhhccCCCHHHHHHHHccCchHHHHH
Confidence 345899999999996 99999999999999999999999999999999999999999 89999999988 57779999
Q ss_pred chhhhcccchhhHHHHHHHHHhCCC
Q psy4803 106 GFGLIMCGLHCEFACLMFKHLVNKP 130 (235)
Q Consensus 106 ~li~~de~~ht~~~~ll~~~L~~~~ 130 (235)
.+..+++|. |+...+ +.+|..+.
T Consensus 81 ~L~~A~kg~-tde~~l-ieIL~~Rs 103 (295)
T 4evf_A 81 HIRDALSGR-NDHMAF-FDTVILCT 103 (295)
T ss_dssp HHHHHHHSS-CCHHHH-HHHHTSCC
T ss_pred HHHHHhhCC-CCHHHH-HHHHHcCC
Confidence 999999998 887664 47777653
Done!