RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4803
(235 letters)
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Length = 334
Score = 98.7 bits (245), Expect = 4e-25
Identities = 52/86 (60%), Positives = 64/86 (74%)
Query: 113 GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEY 172
GLH +FACL+F HL NKP ++ IV +AV +EQ + +ALPV L+GMN DLM QY+E+
Sbjct: 249 GLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEF 308
Query: 173 VADRLLVDLGCSKHYFAENPFDFMEN 198
VADRLLV G K+Y ENPFDFMEN
Sbjct: 309 VADRLLVAFGNKKYYKVENPFDFMEN 334
>d1w68a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 88.7 bits (219), Expect = 1e-21
Identities = 58/81 (71%), Positives = 73/81 (90%)
Query: 113 GLHCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEY 172
GLHC+FACLMFKHLV+KP+E+R++ I+ +AV +EQEFLTEALPVKLIGMNC LMKQYIE+
Sbjct: 201 GLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEF 260
Query: 173 VADRLLVDLGCSKHYFAENPF 193
VADRL+++LG +K + ENPF
Sbjct: 261 VADRLMLELGFNKIFRVENPF 281
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia
trachomatis [TaxId: 813]}
Length = 317
Score = 88.7 bits (219), Expect = 2e-21
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 113 GLHCEFACLMFKHLVNKPSE-------ERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDL 165
+H F + + + E + I ++ AV +E E+ + LP ++G+ +
Sbjct: 227 TIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASM 286
Query: 166 MKQYIEYVADRLLVDLGCSKHYFAENPFDFM 196
Y++++ADR L +G Y +NPF +M
Sbjct: 287 FIDYVQHIADRRLERIGLKPIYHTKNPFPWM 317
>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y4 [TaxId: 4932]}
Length = 285
Score = 85.6 bits (211), Expect = 1e-20
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 115 HCEFACLMFKHLVNKPSEERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMKQYIEYVA 174
+ +F+CL+F HL KP+ + I+ I+ +AV +E+E+ + +LPV+ GM+ + YIE+VA
Sbjct: 213 YTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVA 272
Query: 175 DRLLVDLGCSKHY 187
D LL G K+Y
Sbjct: 273 DGLLQGFGNEKYY 285
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli
[TaxId: 562]}
Length = 339
Score = 79.0 bits (194), Expect = 6e-18
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 13/98 (13%)
Query: 114 LHCEFACLMFKHLVNKPSEE-----------RIKSIVLDAVLVEQEFLTEAL-PVKLIGM 161
LH M L + + + + A E+++ +IG+
Sbjct: 240 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 299
Query: 162 NCDLMKQYIEYVADRLLVDLGCSKHY-FAENPFDFMEN 198
N D++ QY+EY+ + + +G + NP ++
Sbjct: 300 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINT 337
>d1bo9a_ a.65.1.1 (A:) Annexin I {Human (Homo sapiens) [TaxId:
9606]}
Length = 73
Score = 62.8 bits (153), Expect = 5e-14
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G DE+T IL R+ Q ++ + Y TG LDE + + +G ++E ++A+
Sbjct: 18 KGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLAL 71
>d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 318
Score = 61.9 bits (150), Expect = 6e-12
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 15 KDQEERMTA--PGITRSVCSLWFEARR---------------------GELMLGTDESTF 51
+ E+ + G + + + +A R GEL GTDE F
Sbjct: 132 SNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKF 191
Query: 52 NAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISPLTNYKPGF 107
IL TRS L VF +Y T++G +++E I RE SG+++ L+A+ P +
Sbjct: 192 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAY 247
Score = 55.4 bits (133), Expect = 8e-10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
LGTDE + +L RS Q ++ ++ TL G +L + E +G ++ ++A+
Sbjct: 28 LGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVALMK 83
Score = 47.3 bits (112), Expect = 4e-07
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GTD+ T ++ +RS L + ++ L I + SGD K+ L+ +
Sbjct: 259 AGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFATSLYSMIKGDTSGDYKKALLLL 312
Score = 36.5 bits (84), Expect = 0.002
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 34 WFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEG 93
+E + GTDE I+ +R+ +L + Y G L++ + + SG +
Sbjct: 90 AYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRM 149
Query: 94 LIAIS 98
L+ +
Sbjct: 150 LVVLL 154
>d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId:
9606]}
Length = 319
Score = 61.2 bits (148), Expect = 1e-11
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G GTD + +I+ RS P L +VF +Y + + +++ E+I +E GD++ + +
Sbjct: 182 GVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNL 239
Score = 53.1 bits (127), Expect = 5e-09
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G DE T IL RS Q ++ Y T EL A+ SG ++ ++ +
Sbjct: 29 KGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGL 82
Score = 46.5 bits (110), Expect = 8e-07
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GT + I+ +RS + ++ S++ G L I ++ GD ++ L+ +
Sbjct: 261 KGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYL 314
Score = 40.7 bits (95), Expect = 6e-05
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 34 WFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEG 93
E + LGTDE + I+C+R+ +L E+ Y + +L++ I + SGD ++
Sbjct: 91 ASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKL 150
Query: 94 LIAI 97
++A+
Sbjct: 151 MVAL 154
>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 309
Score = 60.4 bits (146), Expect = 2e-11
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GE GTDE F +LC+R+ L VF +Y + +++++I E SG ++ L+AI
Sbjct: 172 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAI 229
Score = 54.2 bits (130), Expect = 2e-09
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE +L RS Q E+ + Y T G +L + + E SG+ ++ ++ +
Sbjct: 20 LGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGM 73
Score = 47.7 bits (113), Expect = 3e-07
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTD+ T ++ +R+ + ++ + + L G L I + SGD ++ L+ +
Sbjct: 251 LGTDDDTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLIL 304
Score = 38.4 bits (89), Expect = 4e-04
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 34 WFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEG 93
E R+ GTDE IL +R+ ++ + Y G L++ I + S +
Sbjct: 82 VQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRV 141
Query: 94 LIAI 97
L+++
Sbjct: 142 LVSL 145
>d1avca2 a.65.1.1 (A:351-671) Annexin VI {Cow (Bos taurus) [TaxId:
9913]}
Length = 321
Score = 58.5 bits (141), Expect = 8e-11
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 15 KDQEERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLT 74
+ E+R A + + A + E+ F ILCTRSYP L VF ++ +T
Sbjct: 161 EGGEDRERAREDAQVAAEILEIADTTSGDKSSLETRFMMILCTRSYPDLRRVFQEFVKMT 220
Query: 75 GHELDEAIGREFSGDIKEGLIAI 97
++++ I +E SGD+++ +AI
Sbjct: 221 NYDVEHTIKKEMSGDVRDVFVAI 243
Score = 54.2 bits (130), Expect = 2e-09
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGTDE T I+ RS Q ++ + + G +L + E SGD+ ++ +
Sbjct: 29 LGTDEDTIIDIITHRSNAQRQQIRQTFKSHFGRDLMADLKSELSGDLARLILGL 82
Score = 46.2 bits (109), Expect = 1e-06
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GT+E T I+ +RS L + ++ L +AI + SG + L+AI
Sbjct: 265 AGTEEKTLTRIMVSRSEIDLLNIRREFIEKYDKSLHQAIEGDTSGHFLKALLAI 318
Score = 41.1 bits (96), Expect = 5e-05
Identities = 17/79 (21%), Positives = 32/79 (40%)
Query: 19 ERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHEL 78
R+ + + ++ GTDE IL TR+ ++ + Y L
Sbjct: 76 ARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIQAINKAYKEDYHKTL 135
Query: 79 DEAIGREFSGDIKEGLIAI 97
++A+ + SG K LI++
Sbjct: 136 EDALSSDTSGHFKRILISL 154
>d3dhza1 a.25.1.2 (A:14-297) Ribonucleotide reductase R2
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 284
Score = 58.2 bits (140), Expect = 8e-11
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 115 HCEFACLMFKHLVNKPSE-------ERIKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMK 167
H + ++ V K SE ++ D E E+ + +G D +K
Sbjct: 192 HGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYD--DLGWTED-VK 248
Query: 168 QYIEYVADRLLVDLGCSKHY 187
+++ Y A++ L +LG +
Sbjct: 249 RFLRYNANKALNNLGYEGLF 268
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella
typhimurium [TaxId: 90371]}
Length = 283
Score = 57.8 bits (139), Expect = 1e-10
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 115 HCEFACLMFKHLVNKPSEER-------IKSIVLDAVLVEQEFLTEALPVKLIGMNCDLMK 167
H + ++ + K S ++++ E + TEAL + +N +K
Sbjct: 190 HGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEALYAETGWVND--VK 246
Query: 168 QYIEYVADRLLVDLGCSKHYFAE----NPFDF 195
++ Y A++ L++LG + E NP
Sbjct: 247 AFLCYNANKALMNLGYEALFPPEMADVNPAIL 278
>d1dm5a_ a.65.1.1 (A:) Annexin XII {Hydra vulgaris [TaxId: 6087]}
Length = 315
Score = 55.4 bits (133), Expect = 8e-10
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDES FNA+L TRSYPQL ++F +Y ++ + +AI EFSGDIK GL+AI
Sbjct: 184 IGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAI 237
Score = 53.5 bits (128), Expect = 4e-09
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE + IL TRS Q ++ + Y TL G L++ + E SG+ + +A+
Sbjct: 28 IGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALAL 81
Score = 46.6 bits (110), Expect = 8e-07
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
LGT + T IL +RS LA + + + G L E I + SGD K+ L+ I
Sbjct: 259 LGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQI 312
Score = 39.2 bits (91), Expect = 2e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 36 EARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLI 95
+ LGTD++ ILCT+S Q+ + + + L +L++ I E SG+ + L+
Sbjct: 92 QLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLV 151
Query: 96 AIS 98
++
Sbjct: 152 SML 154
>d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId:
9606]}
Length = 323
Score = 55.0 bits (132), Expect = 1e-09
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GTDE F ILC RS+PQL F +Y ++ ++ ++I E SG ++ L+AI
Sbjct: 191 GTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAI 243
Score = 53.1 bits (127), Expect = 5e-09
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE +IL RS Q + +Y G EL + + + SG + ++A+
Sbjct: 34 IGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVAL 87
Score = 46.5 bits (110), Expect = 9e-07
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GTDE T N I+ +RS L ++ +++ G+ L AI + SGD + L+ I
Sbjct: 265 IGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 40.0 bits (93), Expect = 1e-04
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 19 ERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHEL 78
E + +T + ++ GT+E IL TR+ Q+ ++ YYT+ L
Sbjct: 81 EHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSL 140
Query: 79 DEAIGREFSGDIKEGLIAI 97
+ I E SGD ++ L+ +
Sbjct: 141 GDDISSETSGDFRKALLTL 159
>d1hm6a_ a.65.1.1 (A:) Annexin I {Pig (Sus scrofa) [TaxId: 9823]}
Length = 343
Score = 55.0 bits (132), Expect = 1e-09
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GE GTD + F IL TRSYP L VF +Y + H++++ + E GDI+ L +
Sbjct: 209 GERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVV 266
Score = 53.9 bits (129), Expect = 3e-09
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G DE+T IL R+ Q ++ + Y G LDEA+ + +G ++E +A+
Sbjct: 57 KGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALAL 110
Score = 46.2 bits (109), Expect = 1e-06
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+GT T I+ +RS + ++ + Y L G L +AI E GD ++ L+A+
Sbjct: 288 IGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVAL 341
Score = 36.9 bits (85), Expect = 0.001
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 19 ERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHEL 78
E + + E R LGTDE T N IL +R+ ++ E+ Y +L
Sbjct: 104 EEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDL 163
Query: 79 DEAIGREFSGDIKEGLIAIS 98
+ I + SGD ++ L++++
Sbjct: 164 AKDITSDTSGDYQKALLSLA 183
>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId:
9913]}
Length = 341
Score = 54.6 bits (131), Expect = 2e-09
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
G+D+ ++ +RS Q E+ Y +L G +L + E +G + ++ +
Sbjct: 27 FGSDKEAIINLITSRSNKQRQEICQNYKSLYGKDLIADLKYELTGKFERLIVGL 80
Score = 54.2 bits (130), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 40 GELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAISP 99
GEL GTDE+ F IL RS L VF +Y TG ++ +I E SGD ++ ++A+
Sbjct: 179 GELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVK 238
Query: 100 LTNYKPGFGLIMCGLHCEFACLMFKHLVNKPSEER 134
+ FA +FK + + +
Sbjct: 239 CIRSTAEY----------FAERLFKAMKGLGTRDN 263
Score = 43.1 bits (101), Expect = 1e-05
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GT ++T I+ +RS + ++ + T L I + SG+ K+ L+ +
Sbjct: 259 GTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKL 311
Score = 38.0 bits (88), Expect = 6e-04
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 31 CSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDI 90
+ E + +GTDE IL +R+ Q+ ++ + Y +L+ I + SG
Sbjct: 86 YADAKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAYKDAYERDLEADITGDTSGHF 145
Query: 91 KEGLIAIS 98
++ L+ +
Sbjct: 146 RKMLVVLL 153
>d1n00a_ a.65.1.1 (A:) Annexin GH1 {Cotton (Gossypium hirsutum)
[TaxId: 3635]}
Length = 318
Score = 54.2 bits (130), Expect = 2e-09
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLI 95
GT+E IL R+ Q + Y G +L +A+ +E S D + ++
Sbjct: 29 WGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERLVL 80
Score = 48.9 bits (116), Expect = 1e-07
Identities = 8/53 (15%), Positives = 21/53 (39%)
Query: 45 GTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
+ +L TRS Q+ + Y G+++++ + + + L +
Sbjct: 185 AYSDDDVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLALLRST 237
Score = 43.8 bits (103), Expect = 6e-06
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 44 LGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEGLIAI 97
GTDE ++CTR+ L + +Y L AI ++ GD ++ L+ +
Sbjct: 259 RGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVL 312
Score = 40.4 bits (94), Expect = 9e-05
Identities = 16/80 (20%), Positives = 25/80 (31%)
Query: 19 ERMTAPGITRSVCSLWFEARRGELMLGTDESTFNAILCTRSYPQLAEVFSQYYTLTGHEL 78
ER+ A + I CTRS QL Y+ L
Sbjct: 76 ERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSL 135
Query: 79 DEAIGREFSGDIKEGLIAIS 98
+E + +GD + L+ +
Sbjct: 136 EEDVAHHTTGDFHKLLLPLV 155
>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon
Pyrobaculum aerophilum [TaxId: 13773]}
Length = 276
Score = 30.5 bits (68), Expect = 0.15
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 70 YYTLTGHELDEAIGREFSGDIKEGLIAISPLT 101
YY L G +L + +KEG IAI+PLT
Sbjct: 207 YYWLYGRDLAPEPETDVYVVLKEGGIAITPLT 238
>d1n0ua1 b.43.3.1 (A:344-481) Elongation factor 2 (eEF-2), domain
II {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 138
Score = 24.7 bits (53), Expect = 8.3
Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Query: 47 DESTFNAILCTRSYPQLAEVFSQYYTLTGHELDEAIGREFSGDIKEG 93
D + C + V T A GR F+G +K G
Sbjct: 20 DANCIAIKNCDPKADLMLYVSKMVPTSDKGRFY-AFGRVFAGTVKSG 65
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.410
Gapped
Lambda K H
0.267 0.0511 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 869,536
Number of extensions: 39787
Number of successful extensions: 107
Number of sequences better than 10.0: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 51
Length of query: 235
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 152
Effective length of database: 1,268,006
Effective search space: 192736912
Effective search space used: 192736912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)