Query psy4805
Match_columns 159
No_of_seqs 174 out of 1151
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 18:11:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4805.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4805hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0160 GabT 4-aminobutyrate a 100.0 1.9E-33 4.2E-38 233.9 13.1 129 1-159 123-254 (447)
2 COG4992 ArgD Ornithine/acetylo 100.0 2.1E-33 4.6E-38 229.1 10.1 110 1-159 106-216 (404)
3 COG0161 BioA Adenosylmethionin 100.0 2.3E-32 5.1E-37 226.7 12.4 133 1-159 111-247 (449)
4 KOG1405|consensus 100.0 4.4E-32 9.5E-37 217.0 13.4 158 1-159 146-303 (484)
5 TIGR00699 GABAtrns_euk 4-amino 100.0 9.2E-32 2E-36 226.7 14.7 156 1-159 128-283 (464)
6 PRK05965 hypothetical protein; 100.0 2.3E-30 4.9E-35 218.4 13.7 133 1-159 113-247 (459)
7 PRK07482 hypothetical protein; 100.0 3.4E-30 7.4E-35 217.4 13.5 134 1-159 117-252 (461)
8 PRK07678 aminotransferase; Val 100.0 4.7E-30 1E-34 216.1 14.0 133 1-159 111-245 (451)
9 PRK08742 adenosylmethionine--8 100.0 4.5E-30 9.8E-35 217.1 13.8 132 1-159 135-269 (472)
10 PRK07481 hypothetical protein; 100.0 5.9E-30 1.3E-34 215.4 14.1 134 1-159 110-245 (449)
11 PRK06916 adenosylmethionine--8 100.0 8.3E-30 1.8E-34 215.0 13.9 132 1-159 122-256 (460)
12 PRK06943 adenosylmethionine--8 100.0 8.2E-30 1.8E-34 214.7 13.8 132 1-159 120-254 (453)
13 PRK07030 adenosylmethionine--8 100.0 1.3E-29 2.9E-34 214.0 14.1 132 1-159 113-247 (466)
14 PRK06938 diaminobutyrate--2-ox 100.0 1.5E-29 3.2E-34 213.7 13.6 128 2-159 134-263 (464)
15 PRK07483 hypothetical protein; 100.0 4.4E-29 9.6E-34 209.7 14.0 134 1-159 96-232 (443)
16 PRK06931 diaminobutyrate--2-ox 100.0 4.2E-29 9.1E-34 210.7 13.6 129 1-159 127-257 (459)
17 PRK07036 hypothetical protein; 100.0 5.7E-29 1.2E-33 210.2 14.2 133 1-159 118-252 (466)
18 KOG1401|consensus 100.0 2.5E-29 5.4E-34 204.0 11.2 117 1-159 122-238 (433)
19 TIGR03251 LAT_fam L-lysine 6-t 100.0 8E-29 1.7E-33 207.5 14.1 139 1-159 109-250 (431)
20 PRK08297 L-lysine aminotransfe 100.0 8.7E-29 1.9E-33 208.0 14.3 139 1-159 116-257 (443)
21 PRK07480 putative aminotransfe 100.0 7.5E-29 1.6E-33 209.0 13.8 133 1-159 117-251 (456)
22 PRK06917 hypothetical protein; 100.0 1.4E-28 3E-33 206.9 13.7 133 1-159 97-232 (447)
23 PRK06173 adenosylmethionine--8 100.0 1.7E-28 3.6E-33 205.5 13.1 127 1-159 110-239 (429)
24 PRK05639 4-aminobutyrate amino 100.0 2.1E-28 4.5E-33 206.3 13.4 132 1-159 119-254 (457)
25 PRK06105 aminotransferase; Pro 100.0 3E-28 6.5E-33 205.6 13.7 134 1-159 115-250 (460)
26 KOG1404|consensus 100.0 2.1E-28 4.6E-33 197.7 11.8 128 1-159 115-244 (442)
27 PRK13360 omega amino acid--pyr 100.0 3.4E-28 7.5E-33 204.3 13.4 133 1-159 112-247 (442)
28 PRK06541 hypothetical protein; 100.0 5.8E-28 1.3E-32 203.8 14.0 133 1-159 118-253 (460)
29 PRK09221 beta alanine--pyruvat 100.0 5.3E-28 1.1E-32 203.3 13.5 133 1-159 115-250 (445)
30 PRK06062 hypothetical protein; 100.0 5.2E-28 1.1E-32 203.7 13.2 127 1-159 118-246 (451)
31 PRK09264 diaminobutyrate--2-ox 100.0 6.5E-28 1.4E-32 201.7 12.5 121 1-159 109-230 (425)
32 TIGR03372 putres_am_tran putre 100.0 8.3E-28 1.8E-32 201.9 12.4 116 1-159 140-256 (442)
33 PF00202 Aminotran_3: Aminotra 99.9 2.5E-28 5.5E-33 198.9 8.3 127 1-159 82-209 (339)
34 TIGR02407 ectoine_ectB diamino 99.9 1.1E-27 2.3E-32 199.7 12.1 121 1-159 105-226 (412)
35 PLN02760 4-aminobutyrate:pyruv 99.9 1.9E-27 4E-32 202.6 13.6 134 1-159 157-292 (504)
36 PRK11522 putrescine--2-oxoglut 99.9 1.3E-27 2.9E-32 201.5 12.4 116 1-159 147-263 (459)
37 PRK06918 4-aminobutyrate amino 99.9 1.9E-27 4.1E-32 200.2 13.0 128 1-159 121-251 (451)
38 TIGR00709 dat 2,4-diaminobutyr 99.9 2.3E-27 5E-32 199.3 13.3 129 1-159 108-238 (442)
39 PRK05630 adenosylmethionine--8 99.9 3E-27 6.4E-32 197.7 13.4 125 1-159 106-233 (422)
40 PRK08593 4-aminobutyrate amino 99.9 4.1E-27 9E-32 197.9 13.2 128 1-159 109-239 (445)
41 KOG1402|consensus 99.9 1.2E-27 2.5E-32 190.2 8.8 118 1-159 122-239 (427)
42 TIGR00700 GABAtrnsam 4-aminobu 99.9 4.8E-27 1E-31 196.1 12.7 127 1-159 100-229 (420)
43 PRK12403 putative aminotransfe 99.9 1.1E-26 2.4E-31 196.1 14.3 132 1-159 121-254 (460)
44 PRK05964 adenosylmethionine--8 99.9 1.7E-26 3.6E-31 193.0 13.1 123 1-159 108-232 (423)
45 PRK06082 4-aminobutyrate amino 99.9 1.8E-26 3.9E-31 194.7 13.0 123 1-159 136-260 (459)
46 PRK07986 adenosylmethionine--8 99.9 2E-26 4.3E-31 192.9 13.1 126 1-159 109-237 (428)
47 PLN02974 adenosylmethionine-8- 99.9 2.2E-26 4.9E-31 204.2 13.9 150 1-159 433-617 (817)
48 PRK05769 4-aminobutyrate amino 99.9 2.3E-26 5E-31 193.2 13.2 129 1-159 121-253 (441)
49 PRK06148 hypothetical protein; 99.9 2.8E-26 6.2E-31 208.3 12.9 128 1-159 686-816 (1013)
50 PRK08117 4-aminobutyrate amino 99.9 7.3E-26 1.6E-30 189.6 13.1 128 1-159 109-239 (433)
51 PRK06777 4-aminobutyrate amino 99.9 6.5E-26 1.4E-30 189.5 12.1 122 1-159 107-230 (421)
52 PRK07495 4-aminobutyrate amino 99.9 7.9E-26 1.7E-30 189.2 12.1 122 1-159 107-230 (425)
53 PRK04612 argD acetylornithine 99.9 9.4E-26 2E-30 187.9 12.1 115 1-159 104-219 (408)
54 PRK12389 glutamate-1-semialdeh 99.9 8.4E-26 1.8E-30 189.1 11.7 116 1-159 115-232 (428)
55 PRK06058 4-aminobutyrate amino 99.9 1.3E-25 2.9E-30 188.7 12.3 126 1-159 123-251 (443)
56 PRK08360 4-aminobutyrate amino 99.9 2.2E-25 4.9E-30 187.3 13.1 128 1-159 107-236 (443)
57 PRK09792 4-aminobutyrate trans 99.9 2E-25 4.3E-30 186.6 12.0 122 1-159 107-230 (421)
58 COG0001 HemL Glutamate-1-semia 99.9 6.7E-25 1.4E-29 180.9 11.1 118 1-159 115-232 (432)
59 PRK04013 argD acetylornithine/ 99.9 7.5E-25 1.6E-29 180.1 10.4 107 1-159 87-194 (364)
60 PLN00144 acetylornithine trans 99.9 1.3E-24 2.9E-29 179.6 11.3 121 1-159 78-199 (382)
61 TIGR00508 bioA adenosylmethion 99.9 2.7E-24 5.9E-29 180.1 13.3 127 1-159 111-240 (427)
62 PRK06149 hypothetical protein; 99.9 2E-24 4.4E-29 195.8 12.6 127 1-159 647-776 (972)
63 PLN02482 glutamate-1-semialdeh 99.9 4.9E-24 1.1E-28 180.4 11.3 116 1-159 161-278 (474)
64 PRK07046 aminotransferase; Val 99.9 7.9E-24 1.7E-28 178.4 10.8 113 1-159 136-250 (453)
65 PLN02624 ornithine-delta-amino 99.9 1.8E-23 3.9E-28 177.1 12.7 118 1-159 138-256 (474)
66 PRK00615 glutamate-1-semialdeh 99.9 1.3E-23 2.7E-28 176.3 11.2 115 1-159 116-233 (433)
67 TIGR03246 arg_catab_astC succi 99.9 2.4E-23 5.3E-28 172.6 11.3 113 1-159 98-211 (397)
68 PRK12381 bifunctional succinyl 99.9 2.7E-23 5.9E-28 172.8 11.3 113 1-159 102-215 (406)
69 PRK03715 argD acetylornithine 99.9 4E-23 8.6E-28 171.5 11.1 113 1-159 99-211 (395)
70 PRK08088 4-aminobutyrate amino 99.9 1.7E-21 3.6E-26 163.0 11.6 122 1-159 108-231 (425)
71 PRK05093 argD bifunctional N-s 99.8 8.7E-21 1.9E-25 157.4 11.1 113 1-159 103-216 (403)
72 PRK04073 rocD ornithine--oxo-a 99.8 1.2E-20 2.6E-25 156.3 11.8 115 1-159 103-218 (396)
73 TIGR01885 Orn_aminotrans ornit 99.8 2.2E-20 4.7E-25 154.9 12.7 118 1-159 100-218 (401)
74 PRK00062 glutamate-1-semialdeh 99.8 2.1E-20 4.6E-25 156.5 11.4 116 1-159 112-229 (426)
75 TIGR00713 hemL glutamate-1-sem 99.8 3.9E-20 8.3E-25 154.3 11.3 115 1-159 110-227 (423)
76 PRK01278 argD acetylornithine 99.8 2E-19 4.4E-24 148.4 11.7 113 1-159 94-207 (389)
77 PRK02936 argD acetylornithine 99.8 8.6E-19 1.9E-23 143.9 10.8 107 1-159 92-199 (377)
78 KOG1403|consensus 99.8 8.5E-20 1.8E-24 144.4 4.4 130 1-158 108-240 (452)
79 PRK00854 rocD ornithine--oxo-a 99.8 2.4E-18 5.2E-23 142.4 12.2 115 1-159 104-219 (401)
80 PRK04260 acetylornithine amino 99.7 7.8E-18 1.7E-22 138.4 10.5 108 1-159 90-197 (375)
81 PTZ00125 ornithine aminotransf 99.7 2E-17 4.3E-22 136.7 11.9 117 1-159 94-210 (400)
82 PRK03244 argD acetylornithine 99.7 9.3E-17 2E-21 132.8 11.0 106 1-159 109-215 (398)
83 PRK06209 glutamate-1-semialdeh 99.7 6.3E-17 1.4E-21 135.8 9.4 105 1-159 110-215 (431)
84 cd00610 OAT_like Acetyl ornith 99.6 2.7E-15 5.9E-20 124.1 10.9 121 1-159 102-223 (413)
85 PRK02627 acetylornithine amino 99.6 3.2E-15 7E-20 123.2 11.1 112 1-159 102-214 (396)
86 TIGR00707 argD acetylornithine 99.2 2.2E-10 4.7E-15 93.9 11.4 112 1-159 90-202 (379)
87 PRK07505 hypothetical protein; 98.8 1.2E-08 2.7E-13 84.7 6.3 97 1-159 111-207 (402)
88 PRK13393 5-aminolevulinate syn 98.5 2.1E-07 4.5E-12 77.4 6.5 94 1-159 111-205 (406)
89 TIGR01821 5aminolev_synth 5-am 98.1 8.9E-06 1.9E-10 67.5 6.4 95 1-159 111-205 (402)
90 PRK09064 5-aminolevulinate syn 97.7 9.1E-05 2E-09 61.5 6.6 43 111-159 164-206 (407)
91 cd00613 GDC-P Glycine cleavage 97.6 0.00033 7.1E-09 57.7 8.3 100 2-159 88-187 (398)
92 PLN02822 serine palmitoyltrans 97.5 0.00042 9.1E-09 59.3 8.3 78 48-159 192-273 (481)
93 PRK13392 5-aminolevulinate syn 97.0 0.0018 3.8E-08 54.0 6.1 30 126-159 177-206 (410)
94 PRK05937 8-amino-7-oxononanoat 96.7 0.0087 1.9E-07 49.2 7.9 78 48-159 94-171 (370)
95 PRK05958 8-amino-7-oxononanoat 96.7 0.01 2.2E-07 48.4 8.1 42 111-159 155-196 (385)
96 PRK07179 hypothetical protein; 96.6 0.012 2.5E-07 49.0 7.8 40 111-159 170-209 (407)
97 TIGR01825 gly_Cac_T_rel pyrido 96.5 0.012 2.7E-07 48.2 7.3 42 112-159 150-191 (385)
98 cd01494 AAT_I Aspartate aminot 95.7 0.039 8.4E-07 39.1 6.0 31 125-159 90-120 (170)
99 PLN02721 threonine aldolase 95.3 0.14 3E-06 41.3 8.5 49 111-159 120-169 (353)
100 cd00609 AAT_like Aspartate ami 94.5 0.11 2.4E-06 41.3 6.0 33 126-159 131-163 (350)
101 cd06454 KBL_like KBL_like; thi 93.8 0.26 5.7E-06 39.5 6.9 43 112-159 118-160 (349)
102 TIGR00858 bioF 8-amino-7-oxono 93.6 0.53 1.1E-05 37.8 8.4 43 111-159 132-174 (360)
103 PLN02880 tyrosine decarboxylas 92.7 1.4 2.9E-05 38.1 9.9 115 2-159 153-267 (490)
104 PRK13520 L-tyrosine decarboxyl 92.3 0.62 1.3E-05 37.8 7.0 18 1-18 82-99 (371)
105 PRK06084 O-acetylhomoserine am 92.2 0.43 9.3E-06 40.4 6.2 39 111-159 133-171 (425)
106 PRK06939 2-amino-3-ketobutyrat 92.1 0.57 1.2E-05 38.3 6.6 45 111-159 158-202 (397)
107 TIGR01326 OAH_OAS_sulfhy OAH/O 91.6 0.26 5.5E-06 41.5 4.1 39 111-159 132-170 (418)
108 TIGR00461 gcvP glycine dehydro 91.5 1.9 4E-05 40.3 9.7 104 2-159 553-656 (939)
109 PRK05994 O-acetylhomoserine am 91.4 0.38 8.2E-06 40.7 5.0 39 111-159 138-176 (427)
110 cd00614 CGS_like CGS_like: Cys 91.3 0.42 9.2E-06 39.3 5.1 39 111-159 115-153 (369)
111 PF01212 Beta_elim_lyase: Beta 91.0 0.62 1.3E-05 37.5 5.6 48 111-159 108-156 (290)
112 TIGR03402 FeS_nifS cysteine de 90.0 0.91 2E-05 37.2 5.9 39 111-159 126-164 (379)
113 PLN03227 serine palmitoyltrans 89.9 0.59 1.3E-05 38.9 4.8 29 127-159 138-166 (392)
114 PRK12566 glycine dehydrogenase 89.3 1.3 2.8E-05 41.2 6.8 103 2-158 566-668 (954)
115 PLN02955 8-amino-7-oxononanoat 89.3 0.67 1.5E-05 39.9 4.7 42 111-159 236-277 (476)
116 PRK15407 lipopolysaccharide bi 89.2 1.2 2.5E-05 37.9 6.1 36 111-159 149-184 (438)
117 cd06450 DOPA_deC_like DOPA dec 88.7 4.4 9.5E-05 32.4 9.0 18 1-18 63-80 (345)
118 PLN03032 serine decarboxylase; 87.9 5 0.00011 33.5 8.9 18 1-18 91-108 (374)
119 PLN02651 cysteine desulfurase 87.0 1.9 4.1E-05 35.2 5.9 38 111-158 128-165 (364)
120 PLN02590 probable tyrosine dec 86.8 8.7 0.00019 33.7 10.1 20 1-20 200-219 (539)
121 PLN02263 serine decarboxylase 86.7 6.8 0.00015 33.8 9.2 18 1-18 158-175 (470)
122 PRK14012 cysteine desulfurase; 86.2 2.2 4.8E-05 35.4 5.9 39 111-159 134-172 (404)
123 TIGR01325 O_suc_HS_sulf O-succ 86.0 1.4 3E-05 36.5 4.7 29 127-159 139-167 (380)
124 TIGR02006 IscS cysteine desulf 85.1 2.5 5.4E-05 35.0 5.8 29 127-159 142-170 (402)
125 TIGR03301 PhnW-AepZ 2-aminoeth 85.0 3.7 8.1E-05 32.8 6.6 14 2-15 57-70 (355)
126 cd00616 AHBA_syn 3-amino-5-hyd 84.8 1.6 3.4E-05 35.1 4.4 35 1-63 39-73 (352)
127 cd06502 TA_like Low-specificit 84.8 5.4 0.00012 31.7 7.5 47 111-159 110-157 (338)
128 TIGR03799 NOD_PanD_pyr putativ 84.3 13 0.00028 32.5 10.0 19 1-19 165-183 (522)
129 PRK05367 glycine dehydrogenase 84.2 6.2 0.00013 37.1 8.3 47 2-70 565-611 (954)
130 PLN02414 glycine dehydrogenase 83.3 12 0.00027 35.2 9.9 103 2-158 591-693 (993)
131 PRK07777 aminotransferase; Val 82.9 5.6 0.00012 32.6 7.0 42 111-159 149-190 (387)
132 PRK02769 histidine decarboxyla 81.5 16 0.00035 30.4 9.2 18 1-18 90-107 (380)
133 COG1003 GcvP Glycine cleavage 80.6 4 8.8E-05 34.9 5.2 48 2-71 132-179 (496)
134 KOG1549|consensus 80.6 6.5 0.00014 33.5 6.4 39 111-159 171-209 (428)
135 PRK13238 tnaA tryptophanase/L- 80.2 4.3 9.3E-05 34.8 5.4 47 111-159 163-209 (460)
136 PRK08134 O-acetylhomoserine am 78.1 5 0.00011 34.1 5.2 14 1-14 85-98 (433)
137 PRK07682 hypothetical protein; 76.3 11 0.00023 30.9 6.6 42 111-159 144-185 (378)
138 TIGR02326 transamin_PhnW 2-ami 76.0 13 0.00027 30.2 6.9 13 2-14 61-73 (363)
139 TIGR03235 DNA_S_dndA cysteine 75.8 8.8 0.00019 31.0 5.9 39 111-159 128-166 (353)
140 PRK08248 O-acetylhomoserine am 75.5 5.8 0.00013 33.6 4.9 13 1-13 85-97 (431)
141 cd06451 AGAT_like Alanine-glyo 75.3 12 0.00026 30.1 6.5 40 111-159 113-152 (356)
142 PRK06108 aspartate aminotransf 73.1 19 0.00042 29.2 7.3 42 111-159 148-189 (382)
143 PF00282 Pyridoxal_deC: Pyrido 72.5 21 0.00045 29.7 7.4 21 1-21 109-129 (373)
144 COG0076 GadB Glutamate decarbo 72.4 10 0.00022 32.6 5.6 21 1-21 125-145 (460)
145 TIGR02617 tnaA_trp_ase tryptop 71.6 7.4 0.00016 33.5 4.6 47 111-159 169-215 (467)
146 PRK09331 Sep-tRNA:Cys-tRNA syn 70.9 17 0.00036 30.0 6.5 45 111-159 141-186 (387)
147 PRK06225 aspartate aminotransf 70.3 20 0.00043 29.3 6.8 31 127-159 157-188 (380)
148 PRK13479 2-aminoethylphosphona 68.1 25 0.00053 28.5 6.9 14 2-15 63-76 (368)
149 PRK05939 hypothetical protein; 66.7 11 0.00023 31.6 4.6 28 127-158 131-158 (397)
150 PF08543 Phos_pyr_kin: Phospho 65.5 12 0.00026 29.0 4.4 41 111-157 75-117 (246)
151 PRK08133 O-succinylhomoserine 64.4 14 0.0003 30.8 4.8 29 127-159 146-174 (390)
152 PRK05613 O-acetylhomoserine am 64.0 9.3 0.0002 32.5 3.7 12 2-13 91-102 (437)
153 PRK00451 glycine dehydrogenase 63.8 41 0.00089 28.2 7.6 38 111-159 194-231 (447)
154 TIGR01822 2am3keto_CoA 2-amino 63.1 16 0.00034 29.9 4.9 45 111-159 154-198 (393)
155 COG2240 PdxK Pyridoxal/pyridox 62.1 15 0.00033 29.5 4.4 19 128-146 104-123 (281)
156 PRK08574 cystathionine gamma-s 60.0 31 0.00067 28.7 6.1 28 127-158 137-164 (385)
157 COG2008 GLY1 Threonine aldolas 58.6 16 0.00034 30.3 4.0 48 111-159 114-161 (342)
158 TIGR01814 kynureninase kynuren 58.5 19 0.00041 29.9 4.6 42 111-159 158-199 (406)
159 TIGR01328 met_gam_lyase methio 57.9 29 0.00063 28.9 5.6 29 127-159 144-172 (391)
160 PRK08249 cystathionine gamma-s 57.5 25 0.00054 29.4 5.1 13 49-61 104-116 (398)
161 PRK07812 O-acetylhomoserine am 57.4 23 0.0005 30.1 5.0 13 1-13 90-102 (436)
162 PRK06176 cystathionine gamma-s 57.3 28 0.0006 28.9 5.4 13 49-61 89-101 (380)
163 TIGR03812 tyr_de_CO2_Arch tyro 57.1 92 0.002 25.0 8.4 38 111-158 143-180 (373)
164 PRK07309 aromatic amino acid a 57.0 72 0.0016 26.2 7.8 44 111-159 153-197 (391)
165 PRK07503 methionine gamma-lyas 56.3 23 0.00049 29.7 4.7 28 127-158 150-177 (403)
166 PRK06702 O-acetylhomoserine am 55.7 27 0.00059 29.7 5.1 39 111-159 137-175 (432)
167 TIGR02080 O_succ_thio_ly O-suc 55.0 25 0.00054 29.2 4.7 13 49-61 91-103 (382)
168 PRK06234 methionine gamma-lyas 53.7 44 0.00096 27.9 6.0 39 111-159 139-177 (400)
169 cd06453 SufS_like Cysteine des 52.5 45 0.00097 27.0 5.8 39 111-159 129-167 (373)
170 PRK08045 cystathionine gamma-s 52.2 28 0.00061 29.0 4.6 15 48-62 91-105 (386)
171 PRK08247 cystathionine gamma-s 51.8 78 0.0017 26.0 7.1 13 49-61 91-103 (366)
172 TIGR03531 selenium_SpcS O-phos 51.0 71 0.0015 27.4 6.9 43 111-159 191-233 (444)
173 PRK07811 cystathionine gamma-s 50.9 46 0.001 27.6 5.7 14 2-15 83-96 (388)
174 TIGR03403 nifS_epsilon cystein 50.3 73 0.0016 26.0 6.7 38 111-158 130-167 (382)
175 PF00266 Aminotran_5: Aminotra 50.1 31 0.00066 28.1 4.5 38 111-158 129-166 (371)
176 PLN02242 methionine gamma-lyas 48.8 38 0.00083 28.5 5.0 40 111-159 152-191 (418)
177 PLN02409 serine--glyoxylate am 48.8 66 0.0014 26.7 6.4 14 49-62 85-98 (401)
178 PRK08064 cystathionine beta-ly 48.4 31 0.00066 28.7 4.3 14 49-62 93-106 (390)
179 cd00617 Tnase_like Tryptophana 47.6 33 0.00072 29.2 4.4 46 111-159 138-184 (431)
180 PRK13260 2,3-diketo-L-gulonate 45.1 28 0.00061 28.6 3.5 30 4-62 90-119 (332)
181 cd00615 Orn_deC_like Ornithine 44.8 1.5E+02 0.0033 23.3 8.5 39 111-159 142-181 (294)
182 PRK07810 O-succinylhomoserine 44.8 50 0.0011 27.7 5.0 28 127-158 155-182 (403)
183 PRK15025 ureidoglycolate dehyd 43.5 30 0.00066 28.7 3.5 32 4-64 90-121 (349)
184 PRK08861 cystathionine gamma-s 43.0 51 0.0011 27.6 4.8 13 1-13 74-86 (388)
185 PF15513 DUF4651: Domain of un 41.9 56 0.0012 20.2 3.6 33 109-145 6-43 (62)
186 PRK04366 glycine dehydrogenase 40.8 1.9E+02 0.004 24.8 8.0 18 2-19 136-153 (481)
187 PLN00175 aminotransferase fami 40.4 1.2E+02 0.0027 25.2 6.8 42 111-159 177-218 (413)
188 KOG0259|consensus 40.2 53 0.0011 27.9 4.3 42 111-159 189-230 (447)
189 PLN00145 tyrosine/nicotianamin 39.4 1.8E+02 0.0039 24.4 7.6 42 111-159 180-221 (430)
190 COG1104 NifS Cysteine sulfinat 38.9 1.2E+02 0.0027 25.6 6.3 17 2-18 68-84 (386)
191 KOG2040|consensus 38.3 1.2E+02 0.0026 27.9 6.4 48 2-71 605-652 (1001)
192 PRK07504 O-succinylhomoserine 38.2 70 0.0015 26.7 4.9 12 2-13 87-98 (398)
193 PLN00105 malate/L-lactate dehy 38.1 42 0.00091 27.6 3.5 32 4-64 79-111 (330)
194 PF09268 Clathrin-link: Clathr 38.1 32 0.00069 17.1 1.7 9 8-16 15-23 (24)
195 PRK05764 aspartate aminotransf 37.3 1.7E+02 0.0036 23.9 7.0 42 111-159 154-195 (393)
196 PRK10098 putative dehydrogenas 37.2 44 0.00095 27.7 3.5 32 4-64 94-125 (350)
197 PRK02948 cysteine desulfurase; 35.9 1.2E+02 0.0026 24.6 5.9 27 128-158 139-165 (381)
198 PRK07269 cystathionine gamma-s 34.9 1.2E+02 0.0025 25.1 5.7 13 1-13 75-87 (364)
199 TIGR02618 tyr_phenol_ly tyrosi 34.8 57 0.0012 28.1 3.8 46 111-159 156-202 (450)
200 PRK13237 tyrosine phenol-lyase 34.6 55 0.0012 28.3 3.8 46 111-159 163-209 (460)
201 PRK12414 putative aminotransfe 34.4 1.8E+02 0.0038 23.8 6.7 32 127-159 162-193 (384)
202 PRK06767 methionine gamma-lyas 34.4 87 0.0019 25.9 4.9 28 127-158 146-173 (386)
203 PRK11658 UDP-4-amino-4-deoxy-L 34.2 93 0.002 25.6 5.0 14 1-14 54-67 (379)
204 TIGR03175 AllD ureidoglycolate 33.7 60 0.0013 26.9 3.8 32 4-64 90-121 (349)
205 PRK09082 methionine aminotrans 33.2 1.9E+02 0.0041 23.6 6.7 42 111-159 153-194 (386)
206 PRK08776 cystathionine gamma-s 32.8 94 0.002 26.0 4.9 13 49-61 100-112 (405)
207 TIGR02379 ECA_wecE TDP-4-keto- 31.9 99 0.0021 25.6 4.8 14 48-61 71-84 (376)
208 PRK05967 cystathionine beta-ly 31.4 96 0.0021 26.1 4.7 15 48-62 103-117 (395)
209 PF11534 HTHP: Hexameric tyros 31.3 45 0.00097 21.3 2.0 17 3-19 13-29 (75)
210 PRK08114 cystathionine beta-ly 31.1 79 0.0017 26.6 4.1 12 2-13 84-95 (395)
211 PRK07671 cystathionine beta-ly 31.0 1.2E+02 0.0026 25.0 5.2 13 49-61 89-101 (377)
212 COG2055 Malate/L-lactate dehyd 30.2 65 0.0014 26.8 3.3 30 6-64 95-124 (349)
213 TIGR03588 PseC UDP-4-keto-6-de 29.3 1.7E+02 0.0036 23.9 5.7 40 111-159 107-146 (380)
214 KOG1364|consensus 28.6 52 0.0011 27.3 2.5 27 131-158 159-190 (356)
215 PF02615 Ldh_2: Malate/L-lacta 28.4 46 0.001 27.4 2.2 32 4-64 90-121 (335)
216 PF01041 DegT_DnrJ_EryC1: DegT 28.3 2.1E+02 0.0045 23.3 6.1 92 1-159 46-138 (363)
217 PF08259 Periviscerokin: Periv 26.8 30 0.00064 13.8 0.4 9 138-146 1-9 (11)
218 PLN02978 pyridoxal kinase 25.1 1.5E+02 0.0033 23.8 4.6 29 129-157 118-147 (308)
219 PF07505 Gp37_Gp68: Phage prot 24.6 2.4E+02 0.0052 22.4 5.6 35 125-159 164-219 (261)
220 cd06452 SepCysS Sep-tRNA:Cys-t 24.6 3.2E+02 0.0068 22.0 6.5 28 127-158 139-166 (361)
221 COG4464 CapC Capsular polysacc 24.4 1.1E+02 0.0024 24.0 3.5 41 2-67 13-53 (254)
222 PF01341 Glyco_hydro_6: Glycos 23.6 1.3E+02 0.0028 24.4 4.0 23 110-135 94-116 (298)
223 PRK09028 cystathionine beta-ly 23.1 2.3E+02 0.005 23.8 5.5 14 49-62 101-114 (394)
224 COG0075 Serine-pyruvate aminot 22.3 4E+02 0.0086 22.5 6.7 37 2-67 63-99 (383)
225 PF09454 Vps23_core: Vps23 cor 21.4 44 0.00095 20.7 0.7 15 145-159 41-55 (65)
226 cd07936 SCAN SCAN oligomerizat 21.1 59 0.0013 21.1 1.3 16 144-159 17-32 (85)
227 PTZ00344 pyridoxal kinase; Pro 20.8 2.3E+02 0.0051 22.4 4.9 29 129-157 109-137 (296)
228 PF13481 AAA_25: AAA domain; P 20.7 1.6E+02 0.0034 21.3 3.7 44 111-158 129-176 (193)
No 1
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=233.95 Aligned_cols=129 Identities=30% Similarity=0.390 Sum_probs=108.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcccc-ccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIH-KIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~-~~~~ 79 (159)
+||||||||+||||||.|+ | |..||+|.++|||+|.++||+|++...+ ..+.
T Consensus 123 ~~sGaeA~E~AiKiAr~~T-------------------------g--r~~viaf~~afHG~T~galslT~~~~~~~~~~~ 175 (447)
T COG0160 123 GNSGAEAVEAAIKIARAYT-------------------------G--RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFG 175 (447)
T ss_pred cCCcHHHHHHHHHHHHHHh-------------------------C--CCcEEEECCcccccchhhHHhccCccccccCCC
Confidence 4899999999999999995 5 8899999999999999999999986544 3455
Q ss_pred CCC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. ++.++|+|+ |++|+... .+++...+++++++.+.....++.++||||+|||||+||+++||++||++||++|
T Consensus 176 ~~~~~v~~~Pyp~~yr~p~~~~---~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~ 252 (447)
T COG0160 176 PLPPGVYHVPYPNPYRCPFGIG---GEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLC 252 (447)
T ss_pred CCCCCeEEecCCccccCcccCc---hhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHH
Confidence 554 478899997 78876432 2456667788888877766566789999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
||
T Consensus 253 ~~ 254 (447)
T COG0160 253 RE 254 (447)
T ss_pred HH
Confidence 86
No 2
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-33 Score=229.11 Aligned_cols=110 Identities=31% Similarity=0.429 Sum_probs=93.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
||||+||||.|||+||+|+. + ++ |.+||+|.+||||+|++++|+|+.+.+++.|.|
T Consensus 106 ~NSGaEA~EaAiKlARk~~~----~------------------~~--k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~P 161 (404)
T COG4992 106 CNSGAEANEAALKLARKYTG----D------------------PE--KSKIIAFENSFHGRTLGALSATGQPKYRKGFGP 161 (404)
T ss_pred cCCcHHHHHHHHHHHHHHcC----C------------------CC--CcEEEEEcCCcCCccceeeeccCChhhccCCCC
Confidence 79999999999999999962 1 23 889999999999999999999999988887765
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++| ||| +++++++|. +++||||+|||||+|||++||++||++||+||++
T Consensus 162 l~~g~~~vp-------------fnD------i~al~~ai~------~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~ 216 (404)
T COG4992 162 LLPGFRHVP-------------FND------IEALEAAID------EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDE 216 (404)
T ss_pred CCCCceecC-------------CCC------HHHHHHHhc------cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHH
Confidence 42 333333 456 788888886 3899999999999999999999999999999986
No 3
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.98 E-value=2.3e-32 Score=226.75 Aligned_cols=133 Identities=22% Similarity=0.320 Sum_probs=105.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcccc-ccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIH-KIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~-~~~~ 79 (159)
++|||||||.|||||++||+.+ |+ |+ |++||++++||||.|+++||++|....+ ..+.
T Consensus 111 ~~sGSeAvEtAlKma~qY~~~~--G~-----------------p~--r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~ 169 (449)
T COG0161 111 TDSGSEAVETALKMALQYWRAR--GQ-----------------PQ--RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYD 169 (449)
T ss_pred eCCchHHHHHHHHHHHHHHHhc--CC-----------------Cc--ceEEEEeccCcCcccchheeccCchhhhhhhcc
Confidence 5899999999999999999887 65 33 8899999999999999999999965444 3343
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccC-CCCccCCHHHHHHHHHH
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSE-GGDNHGSNYFFQQLQKI 156 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~-gGv~~pp~~fl~~lr~l 156 (159)
+. ..+.++|.|. |+.+... ...++. .+++++||++|.+++ +++|||||+|||+|. |||++||++||++||++
T Consensus 170 ~ll~~~~~~~~P~~y~~~~~~--~~~~~~-~~~a~~le~~i~~~g--~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 170 PLLPEVLHLPAPYAYRRGFFG--EGDEEF-AEAADELEALILEHG--PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred ccccCceecCCCcccccCCCC--CChHHH-HHHHHHHHHHHHhcC--cccEEEEEecccccccCCcccCChHHHHHHHHH
Confidence 33 4566788875 3333211 111222 478999999999873 589999999997776 99999999999999999
Q ss_pred hcC
Q psy4805 157 GKK 159 (159)
Q Consensus 157 c~~ 159 (159)
|++
T Consensus 245 C~k 247 (449)
T COG0161 245 CDK 247 (449)
T ss_pred HHH
Confidence 985
No 4
>KOG1405|consensus
Probab=99.98 E-value=4.4e-32 Score=217.04 Aligned_cols=158 Identities=74% Similarity=1.242 Sum_probs=144.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+.|||.|||+|+|.|+.|++.+.|| ...++.+|.+|-|++..||.+.--|++|+|+|||+|++++|.|.+...++...|
T Consensus 146 m~cGs~aNEnA~K~afiwy~~k~rg-~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiP 224 (484)
T KOG1405|consen 146 MLCGSCANENAYKTAFIWYRAKERG-QAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIP 224 (484)
T ss_pred HhccccccHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCC
Confidence 4689999999999999999998888 579999999999999999988899999999999999999999998888888888
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++|+..++|.|++|......+|...++.|++++|++|..+.+....|||+|+||||++||-...+++||++||.+|++
T Consensus 225 aFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~K 303 (484)
T KOG1405|consen 225 AFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKK 303 (484)
T ss_pred CCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHh
Confidence 8899999999999998665556667788999999999999876556899999999999999999999999999999975
No 5
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.98 E-value=9.2e-32 Score=226.66 Aligned_cols=156 Identities=64% Similarity=1.033 Sum_probs=113.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|+..++|+..+++|..+.++-|+.+.||..|.+||+|++||||+|++++++++.+.++....+
T Consensus 128 ~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~ 207 (464)
T TIGR00699 128 GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIP 207 (464)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 58999999999999999986542221122233333455666667733569999999999999999999987544433333
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..++.++|+|.+++|.......++.+...++++++++|+++ .++|||||+|||||++|+++||++||++|++||++
T Consensus 208 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~ 283 (464)
T TIGR00699 208 AFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKK 283 (464)
T ss_pred CCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 34556677776544432111122344556788899999764 46899999999999999999999999999999985
No 6
>PRK05965 hypothetical protein; Provisional
Probab=99.97 E-value=2.3e-30 Score=218.37 Aligned_cols=133 Identities=18% Similarity=0.253 Sum_probs=103.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|++.+ |. |+ |.+||+|++||||+|.+++++|+.+.++..+.+
T Consensus 113 ~~sGSEAve~AlKlAr~~~~~~--g~-----------------~~--r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~ 171 (459)
T PRK05965 113 TLGGSDAVDSAVRFIRHYWNAT--GR-----------------PS--KKQFISLERGYHGSSSVGAGLTALPAFHRGFDL 171 (459)
T ss_pred eCChhHHHHHHHHHHHHHHHhc--CC-----------------CC--ccEEEEecCCcCcccHHHHHhcCCchhhcccCC
Confidence 5899999999999999998654 43 34 889999999999999999999987655555544
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.. .+.++|+|. +++++... .+.+...|+++++++|+++. +++|||||+|||||+||+++||++||++||+||+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~--~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 172 PLPWQHKIPSPYPYRNPVGDD---PQAIIAASVAALRAKVAELG--ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred CCCCCEEcCCCcccccccCCC---hHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 32 334556553 44443211 12345567888999887642 4789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 247 ~ 247 (459)
T PRK05965 247 E 247 (459)
T ss_pred H
Confidence 5
No 7
>PRK07482 hypothetical protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=217.41 Aligned_cols=134 Identities=22% Similarity=0.254 Sum_probs=103.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|+..+ |. |+ |++||+|+++|||+|++++++++...++..+.+
T Consensus 117 ~~sGSEAve~AlKlAr~~~~~~--g~-----------------~~--r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~ 175 (461)
T PRK07482 117 GLSGSDANETQIKLVWYYNNVL--GR-----------------PE--KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDL 175 (461)
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CceEEEecCccCCccHhhhhccCCchhhhccCC
Confidence 5899999999999999998654 32 35 899999999999999999999997766655554
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.. ++.++|+|. ++++.... ..+.+...++++++++|++. .+++|||||+|||||+||+++||++||++||+||+
T Consensus 176 ~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~ 251 (461)
T PRK07482 176 PIARVLHTEAPHYYRRADAGM--SEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK 251 (461)
T ss_pred CCCCCEEcCCCccccccccCC--CHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 42 445566664 23322110 11334456788899888643 24789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 252 ~ 252 (461)
T PRK07482 252 K 252 (461)
T ss_pred H
Confidence 5
No 8
>PRK07678 aminotransferase; Validated
Probab=99.97 E-value=4.7e-30 Score=216.08 Aligned_cols=133 Identities=25% Similarity=0.376 Sum_probs=103.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.||||||.|++.+ |. ++ |++||+|+++|||+|++++++++...++..+.|
T Consensus 111 ~~sGseA~e~AlklAr~~t~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 169 (451)
T PRK07678 111 SNSGSEANETAFKIARQYHAQK--GE-----------------PH--RYKFISRYRAYHGNSMGALAATGQAQRKYKYEP 169 (451)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCccHHHhhcCCCcccccccCC
Confidence 5899999999999999998664 43 35 889999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|.|+ +++|+... .+.++..++++++++|+.. .+++|||||+|||||++|+++||++||++||++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 170 LAPGFLHVPPPDCYRMPGIES---EDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred CCCCCEEeCCCccccccccCC---hHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 3 3455567665 44443211 1234556678888888743 25789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 245 ~ 245 (451)
T PRK07678 245 K 245 (451)
T ss_pred H
Confidence 5
No 9
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.97 E-value=4.5e-30 Score=217.11 Aligned_cols=132 Identities=17% Similarity=0.346 Sum_probs=103.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||+|++.+ |+ |+ |.+||+|+++|||+|++++++++.+.++..+.|
T Consensus 135 ~~sGSEAvE~AlKlAr~~~~~~--g~-----------------~~--r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p 193 (472)
T PRK08742 135 ADNGSAGVEVALKMAFHYFHNR--GE-----------------HR--RTRFIALENGYHGETIGALAVGDIPLYRRVYAP 193 (472)
T ss_pred eCCchHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCCchhhhhccCCcccccccCC
Confidence 5899999999999999998664 43 35 889999999999999999999987666665655
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc 157 (159)
.. ++.++|+|+ ++++.... .+.+...+++.++++|+.. +++|||||+|| |||+||+++||++||++||+||
T Consensus 194 ~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc 267 (472)
T PRK08742 194 LLLESLFAPSPDAYLAEPGQS---AEDYALQAADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELC 267 (472)
T ss_pred CCCCCEEeCCCCccccccCCC---HHHHHHHHHHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHH
Confidence 43 456677775 33332211 1223345678888888753 57999999999 7999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 268 ~~ 269 (472)
T PRK08742 268 DA 269 (472)
T ss_pred HH
Confidence 85
No 10
>PRK07481 hypothetical protein; Provisional
Probab=99.97 E-value=5.9e-30 Score=215.37 Aligned_cols=134 Identities=22% Similarity=0.317 Sum_probs=103.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||+|++++ |. ++ |.+||+|+++|||+|++++++++...++..+.|
T Consensus 110 ~~sGsEAve~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~ 168 (449)
T PRK07481 110 SSGGSDSVETALKLARQYWKVR--GQ-----------------PE--RTKFISLKQGYHGTHFGGASVNGNTVFRRNYEP 168 (449)
T ss_pred cCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCcchhhhccCCCcccccccCC
Confidence 5899999999999999998665 43 35 889999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|.|. +++|+... ..+.+...+++.++++|... .+++|||||+|||||+||+++||++||++||++|+
T Consensus 169 ~~~g~~~~~~~~~~~~~~~~~--d~~~~~~~~~~~le~~i~~~--~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~ 244 (449)
T PRK07481 169 LLPGCFHVETPWLYRNPFTEQ--DPEELARICARLLEREIAFQ--GPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCD 244 (449)
T ss_pred CCCCCEEeCCCcccccccCCC--CHHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHH
Confidence 3 3455566664 44444210 01334456677888888643 25789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 245 ~ 245 (449)
T PRK07481 245 R 245 (449)
T ss_pred H
Confidence 5
No 11
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.97 E-value=8.3e-30 Score=215.01 Aligned_cols=132 Identities=27% Similarity=0.463 Sum_probs=104.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|+..+ |. || |++||+|+++|||+|++++++++...++..+.|
T Consensus 122 ~~SGseAve~AlklAr~~~~~~--g~-----------------tg--r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 180 (460)
T PRK06916 122 SDSGATAVEIAIKMAFQYWQNK--GK-----------------PK--KQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSS 180 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCcCCcccHHhHhccCCcccccccCC
Confidence 5899999999999999998654 43 45 899999999999999999999997766666655
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc 157 (159)
.. +...+|+|+ ++++.... .+.+...+++.++++|++. +++|||||+|| |||+||+++||++||++||++|
T Consensus 181 ~~~~~~~~p~p~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc 254 (460)
T PRK06916 181 LLFEAIKMPYPYTYRSPYGND---KAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLC 254 (460)
T ss_pred CCCCCEEeCCCcccccccCCC---hHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 43 455677764 44443211 1234455688888888754 57999999999 7999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 255 ~~ 256 (460)
T PRK06916 255 TK 256 (460)
T ss_pred HH
Confidence 85
No 12
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.97 E-value=8.2e-30 Score=214.68 Aligned_cols=132 Identities=20% Similarity=0.323 Sum_probs=104.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||+|+..+ |. |+ |.+||+|+++|||+|++++++++...++..|.|
T Consensus 120 ~~sGseAve~AlKlA~~~~~~r--g~-----------------~~--r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 178 (453)
T PRK06943 120 ASDGASAVEIALKMSFHAWRNR--GR-----------------GD--KREFVCLANGYHGETIGALGVTDVALFKDAYDP 178 (453)
T ss_pred eCCCHHHHHHHHHHHHHHHHHh--CC-----------------CC--CCEEEEECCCcCCCcHHhhcccCChhhhccccc
Confidence 5899999999999999998654 42 35 889999999999999999999997766666665
Q ss_pred CC-CCCcccCCCC-CCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPKY-KYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~~-~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+ +..++|+|+. +++... ..+.+...+++.++++|+.+ +++|||||+|| |||+||+++||++||++||++|
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 179 LIRHAHVVASPDARGARPGE---TAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred CCCCCEEECCCCccccccCC---CHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 43 4455777753 222221 12334456788888888754 57999999999 5999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 253 ~~ 254 (453)
T PRK06943 253 DR 254 (453)
T ss_pred HH
Confidence 85
No 13
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=1.3e-29 Score=214.03 Aligned_cols=132 Identities=23% Similarity=0.376 Sum_probs=104.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||.|+..+ |. |+ |.+||+|+++|||+|.+++++++...++..+.|
T Consensus 113 ~~sGsEAve~AlKlAr~~~~~~--g~-----------------t~--r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p 171 (466)
T PRK07030 113 ADNGSSAIEVALKMSFHYWRNR--GK-----------------PR--KKRFVTLTNSYHGETLAAMSVGDVALFTETYKP 171 (466)
T ss_pred eCCcHHHHHHHHHHHHHHHHHh--CC-----------------CC--CcEEEEECCCcCcccHHHHhccCCccccccCCc
Confidence 5899999999999999998655 42 35 889999999999999999999997666665655
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+ ++.++|+|. ++++.... .+.+...+++.++++|.+. +++|||||+|| |||+||+++||++||++||++|
T Consensus 172 ~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 172 LLLDTIKVPSPDCYLRPEGMS---WEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cCCCCEEcCCCCccccccCCC---HHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 43 555677775 33333211 2334456688888888754 57999999999 7999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 246 ~~ 247 (466)
T PRK07030 246 DR 247 (466)
T ss_pred HH
Confidence 85
No 14
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-29 Score=213.68 Aligned_cols=128 Identities=23% Similarity=0.287 Sum_probs=100.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
||||||||.||||||.|+ | |++||+|+++|||+|.+++++++...++..+.+.
T Consensus 134 ~SGSEAve~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~ 186 (464)
T PRK06938 134 PTGTDAVEAALKLVKTAT-------------------------G--RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGAL 186 (464)
T ss_pred CCcHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCccCCccHHHHhhcCCccccccCCCC
Confidence 799999999999999984 5 8899999999999999999999876555544443
Q ss_pred -CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 -FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 -~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.++|+|. +++++... .+.+...+++.++++|+....+.++|||||+|||||+||+++||++||++||++|++
T Consensus 187 ~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~ 263 (464)
T PRK06938 187 LPGVQFLPYPYDYRCPFGLG---GEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEE 263 (464)
T ss_pred CCCcEEeCCCccccccccCc---hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 2455677774 44554211 233445678889988875422235899999999999999999999999999999985
No 15
>PRK07483 hypothetical protein; Provisional
Probab=99.96 E-value=4.4e-29 Score=209.75 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=101.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|++.+ |. |+ |.+||+|+++|||+|++++++++...++..+.|
T Consensus 96 ~~sGsEAve~AlklAr~~~~~~--g~-----------------~~--r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p 154 (443)
T PRK07483 96 VSGGSEAVEAALKLARQYFVEI--GQ-----------------PQ--RRHFIARRQSYHGNTLGALAIGGNAWRREPFAP 154 (443)
T ss_pred cCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCcCHHHhhhcCCcccccccCC
Confidence 5899999999999999998654 42 45 889999999999999999999987655555554
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~lc 157 (159)
.+ ++.++|.|. |+++.... ..+.+...+++++++++... .+++|||||+||||| +||+++||++||++||++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc 230 (443)
T PRK07483 155 LLIEAHHVSPCYAYREQRAGE--SDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVC 230 (443)
T ss_pred CCCCCEEeCCCccccccccCC--CHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHH
Confidence 32 444555552 44332110 12334556778888877643 247899999999999 5899999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 231 ~~ 232 (443)
T PRK07483 231 DR 232 (443)
T ss_pred HH
Confidence 86
No 16
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.96 E-value=4.2e-29 Score=210.69 Aligned_cols=129 Identities=24% Similarity=0.326 Sum_probs=97.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.||||||.|+ | |.+||+|+++|||+|.++++++++..++..+.+
T Consensus 127 ~~SGsEAve~AlklAr~~t-------------------------g--r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 179 (459)
T PRK06931 127 GPSGADAVEAAIKLAKTYT-------------------------G--RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNG 179 (459)
T ss_pred CCCcHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCCccHHHHhhcCCcccccCCCC
Confidence 3899999999999999984 5 889999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|+ +++|+... .+.+.+.+.+.+++.++.....+++|||||+|||||+||+++||++||++||++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 180 LMPGVQFMPYPHEYRCPLGIG---GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCcEEeCCCccccccccCC---chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 3 3556677775 55554311 11122333444555554321124689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 257 ~ 257 (459)
T PRK06931 257 K 257 (459)
T ss_pred H
Confidence 5
No 17
>PRK07036 hypothetical protein; Provisional
Probab=99.96 E-value=5.7e-29 Score=210.21 Aligned_cols=133 Identities=22% Similarity=0.243 Sum_probs=102.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.||||||.|+..+ |. |+ |++||+|+++|||+|++++++++...++..|.+
T Consensus 118 ~~sGseAve~AlklAr~~~~~~--g~-----------------t~--r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~ 176 (466)
T PRK07036 118 TTGGSTAVDSALRFVHYYFNVR--GR-----------------PA--KKHIITRGDAYHGSTYLTASLTGKAADRTEFDY 176 (466)
T ss_pred eCCchHHHHHHHHHHHHHHHhc--CC-----------------CC--ccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence 5899999999999999997654 42 34 889999999999999999999997766655554
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.. .+.++|.|. +++|.... .+.+...+++.+++.+... .+++|||||+|||||++|+++||++||++||++|+
T Consensus 177 ~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 177 ASDLVHHLSSPNPYRRPAGMS---EAAFCDFLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred CCCCcEEecCCcccccccCCC---hHHHHHHHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 32 445566664 34443211 1223445667777777643 25799999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 252 ~ 252 (466)
T PRK07036 252 R 252 (466)
T ss_pred H
Confidence 5
No 18
>KOG1401|consensus
Probab=99.96 E-value=2.5e-29 Score=203.98 Aligned_cols=117 Identities=27% Similarity=0.332 Sum_probs=93.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.||||||+++..+. + .+ +++||+|+|||||+|+++|+++++..++..+.|
T Consensus 122 ~nsGTeAne~ALK~Ark~~~~~~-~------------------~~--~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p 180 (433)
T KOG1401|consen 122 CNSGTEANETALKFARKFTGKKH-P------------------EK--KTKFIAFENSYHGRTLGALSVTGNSKYGLPFDP 180 (433)
T ss_pred ecCCcHHHHHHHHHHHHhhcccC-C------------------cc--ceeEEEEecCcCCcchhHHHhhcccccCCCCCC
Confidence 69999999999999999974331 1 22 679999999999999999999987665543333
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. .|++. ...|+| ..+++++|+.+ .++|||||+|||||+||++++.|+||+.||++|++
T Consensus 181 ~-------~p~v~-----~~~ynd------~t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~ 238 (433)
T KOG1401|consen 181 I-------APDVV-----TAEYND------STALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDD 238 (433)
T ss_pred C-------CCcee-----ecccCC------HHHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhh
Confidence 1 12211 112455 78889999986 56899999999999999999999999999999985
No 19
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.96 E-value=8e-29 Score=207.53 Aligned_cols=139 Identities=32% Similarity=0.528 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhh--cCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNK--QRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~ 78 (159)
+||||||||+|||+||+|+.++ .+|. +...|++||+|+++|||+|++++++++...++..+
T Consensus 109 ~~sGsEAve~AlklAr~~t~~~~~~~g~-----------------~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 171 (431)
T TIGR03251 109 IEGGALAVENALKTAFDWKSRHNQARGI-----------------PAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTAR 171 (431)
T ss_pred eCCcHHHHHHHHHHHHHHhhcchhhcCC-----------------CCCCCceEEEECCccCCcchhhhhccCCccccccC
Confidence 5899999999999999997431 1121 11016789999999999999999999865444444
Q ss_pred CCCCCCCcccCCCCCCCCccch-hhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 79 IPAFDWPIASFPKYKYPLEENE-RENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+..++.+++.|..++|+.... ...+.+...++++++++++.. +++|||||+|||||++|+++||++||++|++||
T Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc 248 (431)
T TIGR03251 172 FPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAER---PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALC 248 (431)
T ss_pred CCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHH
Confidence 4433333344443333331100 001223445688888888764 579999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 249 ~~ 250 (431)
T TIGR03251 249 DE 250 (431)
T ss_pred HH
Confidence 85
No 20
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.96 E-value=8.7e-29 Score=207.97 Aligned_cols=139 Identities=33% Similarity=0.531 Sum_probs=97.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhc--CCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQ--RGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~ 78 (159)
+||||||||+||||||+|++++. +|.+ .++ |++||+|+++|||+|++++++++....+..+
T Consensus 116 ~~SGsEAve~AlKlAr~~~~~~~~~~g~~---------------~~~--r~kii~~~~~yHG~t~~als~~~~~~~~~~~ 178 (443)
T PRK08297 116 VDGGALAVENALKVAFDWKSRKNEARGID---------------PAL--GTKVLHLRGAFHGRSGYTLSLTNTDPRKTAR 178 (443)
T ss_pred eCchHHHHHHHHHHHHHHhhccccccCCC---------------CCC--CceEEEECCCcCCcchhhhhhcCCccccccc
Confidence 58999999999999999975321 1210 013 7899999999999999999999864333322
Q ss_pred CCCCCCCcccCCCCCCCCccc-hhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 79 IPAFDWPIASFPKYKYPLEEN-ERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~-~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+...+.++|.|...+|+... ....+.+...++++++++|+++ +++|||||+|||||++|+++||++||++||+||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc 255 (443)
T PRK08297 179 FPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELC 255 (443)
T ss_pred CCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 232222334444322222110 0001223445678888888864 579999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 256 ~~ 257 (443)
T PRK08297 256 DE 257 (443)
T ss_pred HH
Confidence 86
No 21
>PRK07480 putative aminotransferase; Validated
Probab=99.96 E-value=7.5e-29 Score=209.02 Aligned_cols=133 Identities=23% Similarity=0.275 Sum_probs=99.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|++.+ |. ++ |.+||+|+++|||+|++++++++...++..+.+
T Consensus 117 ~~SGseA~e~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~ 175 (456)
T PRK07480 117 TNSGSEANDTVLRMVRHYWALK--GK-----------------PQ--KKVIISRKNGYHGSTVAGASLGGMKYMHEQGDL 175 (456)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCcchhhhhccCChhhhcccCC
Confidence 5899999999999999998664 42 35 889999999999999999999987554444333
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|. ++++.... .+.+...+++++++.+... .+++|||||+|||||+||+++||++||++||+||+
T Consensus 176 ~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~ 250 (456)
T PRK07480 176 PIPGIVHIDQPYWFGEGGDMT---PEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICR 250 (456)
T ss_pred CCCCCeecCCCcccccccCCC---hHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 2 2445566664 34332111 1223344567777666543 25799999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 251 ~ 251 (456)
T PRK07480 251 K 251 (456)
T ss_pred H
Confidence 5
No 22
>PRK06917 hypothetical protein; Provisional
Probab=99.96 E-value=1.4e-28 Score=206.93 Aligned_cols=133 Identities=26% Similarity=0.410 Sum_probs=101.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||+|++.+ |. |+ |.+||+|+++|||+|.+++++++...++..+.+
T Consensus 97 ~~sGsEAve~AlklAr~~~~~r--g~-----------------t~--r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 155 (447)
T PRK06917 97 VNSGSEANETAMKIAIQHFQER--GI-----------------QG--KHKILSRWMSYHGITMGALSMSGHPLRRQRFVS 155 (447)
T ss_pred eCChHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 5899999999999999998655 43 45 899999999999999999999987655554544
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~lc 157 (159)
.+ ++..+|.|. +++|.... .+.+...+++.++++|+.+. .++|||||+||||| .||+++||++||++||++|
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (447)
T PRK06917 156 LLEDYPTISAPYCYRCPVQKV---YPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEIC 230 (447)
T ss_pred CCCCCeEeCCCcccccccCCC---hHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHHHHHHHHHHH
Confidence 32 344455553 33333211 13344556788888887642 35899999999999 5789999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 231 ~~ 232 (447)
T PRK06917 231 DH 232 (447)
T ss_pred HH
Confidence 85
No 23
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=1.7e-28 Score=205.53 Aligned_cols=127 Identities=20% Similarity=0.332 Sum_probs=98.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCC-ccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHS-KYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~-~~~~~~~~ 79 (159)
++|||||||+||||||.|++.+ |. |+ |.+||+|+++|||+|.+++++++. ..++..+.
T Consensus 110 ~~sGseAve~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 168 (429)
T PRK06173 110 ADSGSVAVEVAMKMALQYQQAK--GE-----------------VQ--RTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFN 168 (429)
T ss_pred eCCchHHHHHHHHHHHHHHHHh--CC-----------------CC--CcEEEEECCCcCCcchhhhccCCCchhhhhccc
Confidence 5899999999999999998655 43 45 889999999999999999999875 33444444
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. .+.++|+|.... .+.+...+++.++++|+.. +++|||||+||| ||+||+++||++||++|++||
T Consensus 169 ~~~~~~~~~~~p~~~~--------~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc 237 (429)
T PRK06173 169 HSLPVQYFLPQPSIKF--------GEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKARELC 237 (429)
T ss_pred ccCCCCeEeCCCCccc--------chhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHH
Confidence 432 344566653211 1223445688888888754 578999999997 999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 238 ~~ 239 (429)
T PRK06173 238 DQ 239 (429)
T ss_pred HH
Confidence 85
No 24
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=2.1e-28 Score=206.35 Aligned_cols=132 Identities=26% Similarity=0.297 Sum_probs=98.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+||||||||+||||||.|+ | |.+||+|+++|||+|++++++++.. .++..+.
T Consensus 119 ~~SGsEA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 119 GLSGSDAVDMAIKVSKFST-------------------------R--RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred eCchHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 5899999999999999984 4 7899999999999999999998753 3344454
Q ss_pred CC-CCCCcccCCC-CCCCCccch-hhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHH
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENE-RENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKI 156 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~l 156 (159)
|. .++.++|+|+ +++|+.... ...+.+.+.+++.+++.+......+++|||||+|||||+||+++||++||++|+++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 43 2455677774 343332100 00133445667778877654211257899999999999999999999999999999
Q ss_pred hcC
Q psy4805 157 GKK 159 (159)
Q Consensus 157 c~~ 159 (159)
|++
T Consensus 252 c~~ 254 (457)
T PRK05639 252 LDE 254 (457)
T ss_pred HHH
Confidence 985
No 25
>PRK06105 aminotransferase; Provisional
Probab=99.96 E-value=3e-28 Score=205.57 Aligned_cols=134 Identities=22% Similarity=0.294 Sum_probs=102.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||.|++.+ |. |+ |.+||+|+++|||+|++++++++...++..+.+
T Consensus 115 ~~SGseAve~AlKlar~~~~~~--g~-----------------t~--r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~ 173 (460)
T PRK06105 115 TNSGSEANDTVVKLVWYYNNAL--GR-----------------PE--KKKIISRQRGYHGVTIASASLTGLPNNHRSFDL 173 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEecCccCCcchhheeccCCcccccccCC
Confidence 5899999999999999987654 32 35 899999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|+ +++..... ..+.+...++++++++|... .+++|||||+|||||++|+++||++||++||+||+
T Consensus 174 ~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~ 249 (460)
T PRK06105 174 PLDRILHTGCPHYYRFGLPGE--SEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLR 249 (460)
T ss_pred CCCCCEEcCCCcccccccCCC--ChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 3 3455677775 23221110 11334455678888888643 24689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 250 ~ 250 (460)
T PRK06105 250 K 250 (460)
T ss_pred H
Confidence 5
No 26
>KOG1404|consensus
Probab=99.96 E-value=2.1e-28 Score=197.71 Aligned_cols=128 Identities=25% Similarity=0.262 Sum_probs=102.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|| + +.+||+++++|||.|..++++|+...++..+..
T Consensus 115 ~nsGsEANelal~mar~Yt-------------------------~--~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~ 167 (442)
T KOG1404|consen 115 VNSGSEANELALKMARLYT-------------------------G--NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPG 167 (442)
T ss_pred ecCCchHHHHHHHHHHHhc-------------------------C--CceEEEeeccccCCchhhcccccCCcccccCCC
Confidence 5899999999999999996 4 779999999999999999999998766544432
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.+.+.|+ ++.+++... ..+..+++.++++++|... .+..|||||+|||||.||++.+|++||++++++||
T Consensus 168 ~~~~~~~~~~Pdp~r~~~~~~~--~~e~~d~~a~~l~d~i~~~--~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 168 VASGVHHTMNPDPYRGIFGGSN--EEEASDRYAKELEDLILYD--GPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred CCCcccccCCCCcccccCCCCc--hhhhHHHHHHHHHHHHHhc--CCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 2 3666677776 555554221 1233456778888888764 36789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 244 k 244 (442)
T KOG1404|consen 244 K 244 (442)
T ss_pred H
Confidence 6
No 27
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.95 E-value=3.4e-28 Score=204.30 Aligned_cols=133 Identities=18% Similarity=0.225 Sum_probs=102.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|+..+ |. ++ |.+||+|+++|||+|++++++++...++..+.+
T Consensus 112 ~~sGseA~e~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~ 170 (442)
T PRK13360 112 TNSGSESVDTALKIALAYHRAR--GE-----------------GS--RTRLIGRERGYHGVGFGGISVGGIVPNRKAFGA 170 (442)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEEcCCcCCccHhhhhccCChhhhhccCC
Confidence 5899999999999999997554 32 23 789999999999999999999997766655544
Q ss_pred CC-CCCcccCCC--CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK--YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~--~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.. .+.++|++. +++++... ...+...+++++++++... .++++||||+|||||++|+++||++||++||+||
T Consensus 171 ~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 171 LLPGVDHLPHTLDLARNAFSKG---QPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred CCCCCEEeCCCchhhccccCCC---hHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 32 445566652 33333211 1234455678888888754 2468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 246 ~~ 247 (442)
T PRK13360 246 DK 247 (442)
T ss_pred HH
Confidence 85
No 28
>PRK06541 hypothetical protein; Provisional
Probab=99.95 E-value=5.8e-28 Score=203.80 Aligned_cols=133 Identities=24% Similarity=0.305 Sum_probs=104.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|++.+ |. ++ |.+||+|+++|||+|++++++++.+.++..+.|
T Consensus 118 ~~sGseAve~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 176 (460)
T PRK06541 118 TTGGSEAVESAWKLAKQYFKLT--GK-----------------PG--KHKVISRAIAYHGTTQGALAITGLPAFKAPFEP 176 (460)
T ss_pred cCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--ccEEEEEcCcccCcchhhhcCcCChhhccccCC
Confidence 5899999999999999997644 32 34 889999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCC-CccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 A-FDWPIASFPK-YKYP-LEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~-~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
. .++.++|+|+ +++| +.. ..+.+...|++.++++++.. .++++||||+|||||.+|+++||++||++|++||
T Consensus 177 ~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc 251 (460)
T PRK06541 177 LVPGGFRVPNTNFYRAPELGD---DPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREIC 251 (460)
T ss_pred CCCCcEEeCCCccccccccCC---CHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 3 3556677775 4444 211 01234556788899888753 2468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 252 ~~ 253 (460)
T PRK06541 252 DR 253 (460)
T ss_pred HH
Confidence 85
No 29
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.95 E-value=5.3e-28 Score=203.33 Aligned_cols=133 Identities=17% Similarity=0.218 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||.|+..+ |. ++ |.+||+|+++|||+|++++++++...++..+.+
T Consensus 115 ~~sGseAve~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 173 (445)
T PRK09221 115 TNSGSESVDTALKIALAYHRAR--GQ-----------------GT--RTRLIGRERGYHGVGFGGISVGGIVNNRKMFGG 173 (445)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCccchhhhccCCChhhhhccCC
Confidence 5899999999999999998654 32 23 789999999999999999999987655555544
Q ss_pred CC-CCCcccCCC--CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AF-DWPIASFPK--YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~-~~~~~p~p~--~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.. +..++|+|. +++++... ...+...++++++++++.. +.++|||||+|||||++|+++||++||++|+++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 174 LLPGVDHLPHTLDLPENAFSKG---QPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred CCCCCeEeCCCccccccccCCC---hHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 32 344556552 22222211 1233445677888888764 2368999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 249 ~~ 250 (445)
T PRK09221 249 DK 250 (445)
T ss_pred HH
Confidence 85
No 30
>PRK06062 hypothetical protein; Provisional
Probab=99.95 E-value=5.2e-28 Score=203.69 Aligned_cols=127 Identities=18% Similarity=0.183 Sum_probs=96.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||.|+ | |++||+|+++|||+|.+++++++.+.++.. .+
T Consensus 118 ~~SGsEAve~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~als~~~~~~~~~~-~~ 169 (451)
T PRK06062 118 TNGGADANEHAVRMARLHT-------------------------G--RPKVLSAYRSYHGGTGSAINLTGDPRRWPN-DT 169 (451)
T ss_pred cCChHHHHHHHHHHHHHhh-------------------------C--CceEEEEeCCCCCCCHHHHhhcCCcccccC-CC
Confidence 5899999999999999994 4 789999999999999999999986543322 22
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++..++.|. +++++... .++.+...+++.++++|+.. ++++|||||+|||||++|+++||++||++||+||+
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~ 245 (451)
T PRK06062 170 GRAGVVHFFGPFLYRSEFHAT--TEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCD 245 (451)
T ss_pred CCCCCEEeCCCCccccccCCC--ChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 2 2334455553 34433110 12334556788899988653 24789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 246 ~ 246 (451)
T PRK06062 246 R 246 (451)
T ss_pred H
Confidence 5
No 31
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.95 E-value=6.5e-28 Score=201.68 Aligned_cols=121 Identities=28% Similarity=0.298 Sum_probs=94.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.|||+||+|+ | |.+||+|+++|||+|++++++|++..++..+.+
T Consensus 109 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 161 (425)
T PRK09264 109 GPTGTNAVEAALKLARKVT-------------------------G--RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGV 161 (425)
T ss_pred CCCHHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCccCCccHHHHHhcCCcccccCCCC
Confidence 3799999999999999983 4 789999999999999999999987655544443
Q ss_pred C-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 A-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. .++.++|+|.+... ...++++++++|+++..+.++|||||+|||||++|++++|++||++|+++|++
T Consensus 162 ~~~~~~~~p~~~~~~~-----------~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~ 230 (425)
T PRK09264 162 PLNNVTRMPYDGYFGG-----------DVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRK 230 (425)
T ss_pred CCCCeEEeCCCCcccc-----------chhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 2 24555666642110 01236778888876432235899999999999999999999999999999985
No 32
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.95 E-value=8.3e-28 Score=201.88 Aligned_cols=116 Identities=27% Similarity=0.428 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|+.. +| |.+||+|+++|||+|.+++++|+...++..+.|
T Consensus 140 ~~SGsEA~e~AlklAr~~t~~----------------------~g--r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p 195 (442)
T TIGR03372 140 CNSGTESVEAALKLAKAYQSP----------------------RG--KFTFIAASGAFHGKSLGALSATAKPAFRKPFMP 195 (442)
T ss_pred eCCchHHHHHHHHHHHHHHhh----------------------cC--CcEEEEECCCccCCCHHHhhccCCcccCCCCCC
Confidence 589999999999999999743 24 789999999999999999999987655555544
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++|+| | ++.+++.++.....+++|||||+|||||++|+++||++||++|+++|++
T Consensus 196 ~~~~~~~~p~~-------------d------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~ 256 (442)
T TIGR03372 196 LLPGFHHVAFG-------------D------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE 256 (442)
T ss_pred CCCCCEEeCCC-------------C------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 32 23333333 2 2223333332111256899999999999999999999999999999985
No 33
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.95 E-value=2.5e-28 Score=198.89 Aligned_cols=127 Identities=31% Similarity=0.493 Sum_probs=95.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||+|+..+ .. |+ |.+||+|+++|||+|++++++++++.++..+.+
T Consensus 82 ~~sGseAve~Alkla~~~~~~~--~~-----------------~~--r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 140 (339)
T PF00202_consen 82 ANSGSEAVEAALKLARQYHNKR--AY-----------------TG--RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGP 140 (339)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--HH-----------------HT--TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCS
T ss_pred ccCchHHHHHHHHHhhcccccc--cc-----------------cC--CceEEEeeeeeeccCcccccccCCccccccccc
Confidence 4899999999999999776554 11 35 899999999999999999999988766665555
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +..++|+|+. ..+.+...++..+++.+.... .++|||||+|||||++|++++|++||++||++|+|
T Consensus 141 ~~~~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~ 209 (339)
T PF00202_consen 141 LYPGVVFVPFPDP---------AADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE 209 (339)
T ss_dssp SSTTEEEEETTCH---------HHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH
T ss_pred cccccccccCCcc---------chhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccc
Confidence 43 3345566531 112334455666666655443 57999999999999999999999999999999985
No 34
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.95 E-value=1.1e-27 Score=199.69 Aligned_cols=121 Identities=27% Similarity=0.338 Sum_probs=94.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+|||+||.|+ | |.+||+|+++|||+|.+++++++...++..+.+
T Consensus 105 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 157 (412)
T TIGR02407 105 GPTGTNAVESALKLARKVT-------------------------G--RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGV 157 (412)
T ss_pred CCCchHHHHHHHHHHhhhc-------------------------C--CCeEEEECCCcCCchHHHHHhcCCcccccCCCC
Confidence 4899999999999999983 4 789999999999999999999987655554443
Q ss_pred C-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 A-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. .++.++|+|++..+ ...+++.++++++++..+.+++||||+|||||++|+++||++||++|+++|++
T Consensus 158 ~~~~~~~~p~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 226 (412)
T TIGR02407 158 PLSNVSRMPYDGYLGG-----------DVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRR 226 (412)
T ss_pred CCCCeEECCCCCcccc-----------chhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHH
Confidence 2 24445565542210 12346778888876532336899999999999999999999999999999985
No 35
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.95 E-value=1.9e-27 Score=202.58 Aligned_cols=134 Identities=20% Similarity=0.287 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.|||+||.|++.+ |. ++ |.+||+|+++|||+|++++++++.+.++..+.+
T Consensus 157 ~~SGsEA~e~AlKlAr~~~~~~--g~-----------------~~--r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~ 215 (504)
T PLN02760 157 TNSGSEANDTQVKLVWYYNNAL--GR-----------------PN--KKKFIARSKSYHGSTLISASLSGLPALHQKFDL 215 (504)
T ss_pred eCChHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCccCChHhhhhccCChhhccCCCC
Confidence 5899999999999999997554 32 34 889999999999999999999987655444433
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. ..+.++++|. ++++.... ..+.+...+++++++++... .+++|||||+|||||++|+++||++||++||+||+
T Consensus 216 ~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~ 291 (504)
T PLN02760 216 PAPFVLHTDCPHYWRFHLPGE--TEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLK 291 (504)
T ss_pred CCCCcEEeCCCcccccCCCCC--cHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 2 2344566664 33322111 11223345567788877543 24689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 292 ~ 292 (504)
T PLN02760 292 K 292 (504)
T ss_pred H
Confidence 5
No 36
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-27 Score=201.54 Aligned_cols=116 Identities=27% Similarity=0.466 Sum_probs=88.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.|||+||.|+.++ | |.+||+|+++|||+|.+++++++...++..+.|
T Consensus 147 ~~SGsEAve~AlklAr~~t~~~----------------------g--r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 202 (459)
T PRK11522 147 CNSGTESVEAALKLAKAYQSPR----------------------G--KFTFIATSGAFHGKSLGALSATAKSTFRKPFMP 202 (459)
T ss_pred eCCchHHHHHHHHHHHHHhccC----------------------C--CcEEEEecCCCCCCcHHHhhhcCCcccccCCCC
Confidence 5899999999999999997322 4 789999999999999999999987655544444
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++|+ +| ++++++.++.....+++|||||+|||||++|+++||++||++|+++|++
T Consensus 203 ~~~~~~~~~~-------------~d------~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~ 263 (459)
T PRK11522 203 LLPGFRHVPF-------------GN------IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE 263 (459)
T ss_pred CCCCCcccCC-------------CC------HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 32 2222222 23 3445555543211246899999999999999999999999999999985
No 37
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.95 E-value=1.9e-27 Score=200.19 Aligned_cols=128 Identities=27% Similarity=0.322 Sum_probs=96.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+||||||||+||||||.|+ | |.+||+|+++|||+|.+++++++.. .++..+.
T Consensus 121 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 173 (451)
T PRK06918 121 LNSGAEAVENAVKIARKYT-------------------------K--RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFG 173 (451)
T ss_pred cCCcHHHHHHHHHHHHHHh-------------------------C--CCcEEEECCCcCccchhhhhhcCCCccccccCC
Confidence 5899999999999999994 4 7899999999999999999998853 3444444
Q ss_pred CCC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. ++.++|+|+ +++|.... .+.+...+++.+++++.... .+++|||||+|||||+||+++||++||++|+++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~ 249 (451)
T PRK06918 174 PFAPEVYKAPFPYEYRRPEGLT---EEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNIC 249 (451)
T ss_pred CCCCCcEEcCCCccccccccCc---hHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHHHHHHHHHHH
Confidence 432 455567764 33332211 12334456677777664321 2468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 250 ~~ 251 (451)
T PRK06918 250 SE 251 (451)
T ss_pred HH
Confidence 85
No 38
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.95 E-value=2.3e-27 Score=199.30 Aligned_cols=129 Identities=23% Similarity=0.382 Sum_probs=95.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.||||||.|+ | |.+||+|+++|||+|.+++++++...++..+.+
T Consensus 108 ~~sGsEA~e~AlklAr~~t-------------------------g--r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 160 (442)
T TIGR00709 108 GPSGADAVEAAIKLAKTYT-------------------------G--RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGM 160 (442)
T ss_pred CCCHHHHHHHHHHHHHHhc-------------------------C--CCeEEEEcCCcCCchHHHHhhcCChhhhccCCC
Confidence 4899999999999999993 4 788999999999999999999986555554444
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|+ +++|+... .+.+...+.+.+++.++......++|||||+|||||++|+++||++||++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~ 237 (442)
T TIGR00709 161 LMPGVQFMPYPHEYRCPFGIG---GEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTR 237 (442)
T ss_pred CCCCcEEeCCCccccccccCC---chhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 3 2445566664 44444211 11222333445556554322224689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 238 ~ 238 (442)
T TIGR00709 238 K 238 (442)
T ss_pred H
Confidence 5
No 39
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=3e-27 Score=197.65 Aligned_cols=125 Identities=25% Similarity=0.351 Sum_probs=95.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+||||||+|++.+ |. ++ |.+||+|+++|||+|++++++++.. .++..|.
T Consensus 106 ~~SGseA~e~AlklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 164 (422)
T PRK05630 106 SDSGSVSVEVAIKMALQYSKGQ--GH-----------------PE--RTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWK 164 (422)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCccHHHhccCCCccccccccc
Confidence 5899999999999999998654 33 34 8899999999999999999998753 3444444
Q ss_pred CC-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc 157 (159)
+. ..+.++|+|.++. . .++ ....+++.+++++. ++|||||+||| ||+||+++||++||++||+||
T Consensus 165 ~~~~~~~~~p~~~~~~-~----~~~--~~~~~~~~~~~~~~------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc 231 (422)
T PRK05630 165 GTLPEQIFAPAPPVRG-S----SPQ--EISEYLRSLELLID------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLC 231 (422)
T ss_pred ccCCCCeEcCCCcccC-C----ChH--HHHHHHHHHHHHHh------hceEEEEEechhcCcCCcccCCHHHHHHHHHHH
Confidence 43 2445566664221 0 111 23346677777764 48999999996 999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 232 ~~ 233 (422)
T PRK05630 232 DK 233 (422)
T ss_pred HH
Confidence 85
No 40
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=4.1e-27 Score=197.93 Aligned_cols=128 Identities=30% Similarity=0.408 Sum_probs=97.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcc-ccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKY-IHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~-~~~~~~ 79 (159)
++|||||||+|||+||.|+ | |++||+|+++|||+|++++++++... ++..+.
T Consensus 109 ~~SGseA~e~AiklAr~~t-------------------------g--r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 109 GLSGSDANDGIIKFARAYT-------------------------G--RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred CCchHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 5899999999999999994 4 78999999999999999999998542 334444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .++.++|+|+ +++++.. .++.....++++++++++.+. .+++|||||+|||||++|+++||++||++|+++|
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc 237 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEE---PDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFC 237 (445)
T ss_pred CCCCCcEEeCCCccccccccC---CcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 43 3455677775 3433321 122334556777887776531 1368999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 238 ~~ 239 (445)
T PRK08593 238 RE 239 (445)
T ss_pred HH
Confidence 85
No 41
>KOG1402|consensus
Probab=99.95 E-value=1.2e-27 Score=190.17 Aligned_cols=118 Identities=25% Similarity=0.274 Sum_probs=93.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
||+|.||+|.|+||||+|..+. ++.+ . .+.+|++-.++|||+|++++|+|..+..+..|.|
T Consensus 122 mnTGaEa~Eta~KLaR~wgy~~-K~ip-----------------~-nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp 182 (427)
T KOG1402|consen 122 MNTGAEAVETACKLARKWGYRK-KNIP-----------------K-NKAKILSAENNFHGRTLGAISLSTDPDSWDGFGP 182 (427)
T ss_pred cccchhHHHHHHHHHHHHHHhh-ccCC-----------------c-cceeEEEecccccCceeeeEEecCCcchhhccCC
Confidence 6899999999999999996554 2331 1 2778999999999999999999987754555655
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++ |.- . ...+|++ +++|+..|+. +.|||||+|||||++||++||++||+++|+||++
T Consensus 183 ~~-----P~~-~-----~~v~Y~d------~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 183 FL-----PGV-V-----DKVPYGD------AEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred CC-----CCc-c-----eeeccCC------HHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHh
Confidence 42 210 0 1123455 7788888874 6999999999999999999999999999999985
No 42
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.94 E-value=4.8e-27 Score=196.10 Aligned_cols=127 Identities=24% Similarity=0.257 Sum_probs=93.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+||||||.|+ | |.+||+|+++|||+|++++++++.. .++..+.
T Consensus 100 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 152 (420)
T TIGR00700 100 FNSGAEAVENAVKIARSYT-------------------------G--RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFG 152 (420)
T ss_pred eCCcHHHHHHHHHHHHHhc-------------------------C--CCcEEEECCCcCCCcHHHHHhcCCCcccccCCC
Confidence 5899999999999999993 4 7789999999999999999998853 2344444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .+..++|+|. ++.+.... +.....+++.++++|.... .+++|||||+|||||++|+++||++|+++|+++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc 227 (420)
T TIGR00700 153 PFAPEVYRAPLPYPYRDGLLDK----QLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWC 227 (420)
T ss_pred CCCCCcEEeCCCcccccccccc----chhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 43 2344566663 33221100 1112245777777774211 2579999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 228 ~~ 229 (420)
T TIGR00700 228 RE 229 (420)
T ss_pred HH
Confidence 85
No 43
>PRK12403 putative aminotransferase; Provisional
Probab=99.94 E-value=1.1e-26 Score=196.10 Aligned_cols=132 Identities=23% Similarity=0.300 Sum_probs=97.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||+|++.+ |. ++ |..||++.++|||+|++++++|+...++. +.+
T Consensus 121 ~~SGseA~e~AiklAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~ 178 (460)
T PRK12403 121 TNSGSEANEVLIRTVRRYWQVL--GK-----------------PQ--KKIMIGRWNGYHGSTLAATALGGMKFMHE-MGG 178 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhh--CC-----------------CC--CcEEEEECCCcCcccHhhhhcCCCccccc-cCC
Confidence 5899999999999999998654 32 22 67899999999999999999998654443 222
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|. ++++.... .+.+.+.+++++++.+... .+++|||||+|||||++|+++||++||++||+||+
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~ 253 (460)
T PRK12403 179 LIPDVAHIDEPYWYANGGELT---PAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICR 253 (460)
T ss_pred CCCCCEEeCCCcccccccCCC---hHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 2 2455566664 33332111 1223344567776666543 24689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 254 ~ 254 (460)
T PRK12403 254 Q 254 (460)
T ss_pred H
Confidence 5
No 44
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=1.7e-26 Score=192.95 Aligned_cols=123 Identities=29% Similarity=0.529 Sum_probs=96.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||+|++.+ |. || |.+||+|+++|||+|.+++++++...++..+.+
T Consensus 108 ~~sGseA~e~A~klar~~~~~~--~~-----------------~~--r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 166 (423)
T PRK05964 108 SDSGSVAVEVALKMALQYWRNR--GE-----------------PG--RSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTP 166 (423)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEEcCCcCCccHHHHhcCCCccccccccC
Confidence 5899999999999999998665 32 45 899999999999999999999986544443333
Q ss_pred C-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|+|. ++ ....+++++++++.++ +++|||||+|| +||++|++++|++||++|+++|+
T Consensus 167 ~~~~~~~~~~~~-----------~d-~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~ 231 (423)
T PRK05964 167 LLFEQVTAPFPP-----------DG-YEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD 231 (423)
T ss_pred cCCCCEEeCCCc-----------ch-hHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 2 1333444432 12 2334578888888764 57999999999 79999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 232 ~ 232 (423)
T PRK05964 232 R 232 (423)
T ss_pred H
Confidence 5
No 45
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=1.8e-26 Score=194.75 Aligned_cols=123 Identities=17% Similarity=0.204 Sum_probs=97.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|+||||+|+ | |.+||+|+++|||+|++++++++...++..+.|
T Consensus 136 ~~sGseAve~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 136 APGGTSAIGMALKLARHIT-------------------------G--NFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred CCCcHHHHHHHHHHHHHhc-------------------------C--CCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 5899999999999999983 4 789999999999999999999987665555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|.|. +++|+.. ++.+...++++++++|+. .++|||||+|||||.| +++||++||++||++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~ 259 (459)
T PRK06082 189 LMAGVERIPPAVSYRGAFPD----ADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICD 259 (459)
T ss_pred CCCCCEEeCCCcccccccCC----hhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHH
Confidence 3 2455566654 4444421 244566778889888874 3589999999999984 78899999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 260 ~ 260 (459)
T PRK06082 260 K 260 (459)
T ss_pred H
Confidence 5
No 46
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.94 E-value=2e-26 Score=192.94 Aligned_cols=126 Identities=23% Similarity=0.389 Sum_probs=94.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+||||||+|++.+ | +| |.+||+|+++|||+|++++++++.. .++..+.
T Consensus 109 ~~SGsEAve~AlklAr~~~~~~--g------------------~~--r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 166 (428)
T PRK07986 109 ADSGSVAVEVAMKMALQYWQAK--G------------------EP--RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYK 166 (428)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--C------------------CC--CcEEEEECCCcCCCcHhhhcccCCchhhhhccC
Confidence 5899999999999999997654 3 24 8899999999999999999998742 2334444
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. +..++|.|... + .+.+...+++++++.|+.. ++++||||+||| ||+||+++||++||++|+++|
T Consensus 167 ~~~~~~~~~~~p~~~--~------~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc 235 (428)
T PRK07986 167 GYLPENLFAPAPQSR--F------DGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLC 235 (428)
T ss_pred CCCCCCEEECCCCcc--c------chhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHH
Confidence 432 33445555311 1 1112223467788888754 578999999996 999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 236 ~~ 237 (428)
T PRK07986 236 DR 237 (428)
T ss_pred HH
Confidence 85
No 47
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.94 E-value=2.2e-26 Score=204.16 Aligned_cols=150 Identities=19% Similarity=0.255 Sum_probs=95.8
Q ss_pred CCCcchHHHHHHHHHHH-HHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccC-
Q psy4805 1 MMCGSCSNENAYKNIFI-WYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKID- 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~- 78 (159)
++|||||||+||||||+ |++++ |.+.+-.+. -....++ |.+||+|++||||.|+++|++++...++..+
T Consensus 433 s~sGSeAvE~AlKmA~r~y~~~~--G~~~~~~~~-----~~~~~~~--r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~ 503 (817)
T PLN02974 433 SDNGSTAIEVALKMAFRKFIVDH--GFLENSGNE-----KRGGDLI--ELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQ 503 (817)
T ss_pred CCchHHHHHHHHHHHHHHHHHhc--CCCcccccc-----cccccCC--CCEEEEECCCcCCCCHHHHhhCCchhhhcccc
Confidence 58999999999999976 66554 421000000 0000013 8899999999999999999999865544433
Q ss_pred CCC--CCCCcccCCCC--CC-------CCc--cch-----h------------hhhHHHHHHHHHHHHHHHHhc--cCCC
Q psy4805 79 IPA--FDWPIASFPKY--KY-------PLE--ENE-----R------------ENKAEDEKCLAEVEDLITKYN--KKGT 126 (159)
Q Consensus 79 ~~~--~~~~~~p~p~~--~~-------~~~--~~~-----~------------~~~~~~~~~~~~le~~i~~~~--~~~~ 126 (159)
.+. ....+++.|.. ++ |.. ... . ....+...|++++++.|++.. .+++
T Consensus 504 ~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~ 583 (817)
T PLN02974 504 QPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNG 583 (817)
T ss_pred cccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCC
Confidence 221 12233333321 11 111 000 0 012234567788888887421 1257
Q ss_pred CeEEEEEcc-cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+|||||+|| +||+|||++||++||++||++||+
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~ 617 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRS 617 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH
Confidence 899999999 499999999999999999999985
No 48
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=2.3e-26 Score=193.21 Aligned_cols=129 Identities=37% Similarity=0.470 Sum_probs=95.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+||||||||+||||||+|+ | |.+||+|+++|||+|.+++++++.. .++..+.
T Consensus 121 ~~SGsEA~e~AlklAr~~t-------------------------g--r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 121 TNSGTESNEAAIKIARYHT-------------------------G--RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred CCchHHHHHHHHHHHHHHh-------------------------C--CCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 5899999999999999984 4 7899999999999999999998753 2344444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHH-HHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHH
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVED-LITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKI 156 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~-~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~l 156 (159)
|. .++.++|+|+ +++|+... ..+++.+.+++.+++ +++... .+++|||||+|||||++|+++||++||++|+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~le~~~~~~~~-~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l 250 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIE--NPEECGNAVLDFIEDYLFKKLV-PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKL 250 (441)
T ss_pred CCCCCeEEeCCCccccccccCC--chHHHHHHHHHHHHHHHHhhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHH
Confidence 43 2455567664 44443210 012233456777877 443311 246899999999999999999999999999999
Q ss_pred hcC
Q psy4805 157 GKK 159 (159)
Q Consensus 157 c~~ 159 (159)
|++
T Consensus 251 ~~~ 253 (441)
T PRK05769 251 ADK 253 (441)
T ss_pred HHH
Confidence 985
No 49
>PRK06148 hypothetical protein; Provisional
Probab=99.94 E-value=2.8e-26 Score=208.28 Aligned_cols=128 Identities=18% Similarity=0.211 Sum_probs=94.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||.|+ | |.+||+|+++|||+|++++++|+.. ++..+.+
T Consensus 686 ~nSGsEA~e~AlklAr~~t-------------------------G--r~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~ 737 (1013)
T PRK06148 686 VNSGSEANSLALRLARAHT-------------------------G--QRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGK 737 (1013)
T ss_pred eCCcHHHHHHHHHHHHHhc-------------------------C--CCeEEEEcCCccCCCcchhhcCchh-hcccCCC
Confidence 5899999999999999994 5 7899999999999999999998843 2333322
Q ss_pred C--CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 A--FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~--~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
. ..+..++.|+ ++.|+... +..+...+++.+++.++.....+++|||||+|||||+||+++||++||++||++|
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc 814 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWP---DAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMV 814 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCC---hhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHH
Confidence 2 1333445553 44454311 1223445566677666532222468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 815 ~~ 816 (1013)
T PRK06148 815 RA 816 (1013)
T ss_pred HH
Confidence 85
No 50
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=7.3e-26 Score=189.59 Aligned_cols=128 Identities=30% Similarity=0.391 Sum_probs=96.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCC-ccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHS-KYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~-~~~~~~~~ 79 (159)
+||||||||.|||+||.|+ | |++||+|+++|||+|.+++++++. ..++..+.
T Consensus 109 ~~SGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 109 SNSGAEAIEGALKLAKHVT-------------------------K--RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred eCcHHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 4899999999999999984 4 789999999999999999999875 33333343
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .++.++|+|+ +++|... ..+.+...++++++++++... .+++|||||+|||||++|+++||++||++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc 237 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGE---DPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREIC 237 (433)
T ss_pred CCCCCcEEeCCCccccccccC---chhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHH
Confidence 32 2455677764 3333211 012233345778888876521 1468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 238 ~~ 239 (433)
T PRK08117 238 DR 239 (433)
T ss_pred HH
Confidence 85
No 51
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-26 Score=189.46 Aligned_cols=122 Identities=30% Similarity=0.330 Sum_probs=91.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+||||||.|+ | |++||+|+++|||+|.+++++++.. .++..+.
T Consensus 107 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 159 (421)
T PRK06777 107 FTTGAEAVENAVKIARAYT-------------------------G--RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFG 159 (421)
T ss_pred eCCcHHHHHHHHHHHHHhh-------------------------C--CCeEEEEcCCcCCccHHHHhhcCCCcccccCCC
Confidence 5899999999999999984 4 7889999999999999999999853 2334443
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
|.. ++.++|+|+..... ....+++.+++++.+.. .+++|||||+|||||++|++++|++||++|+++|+
T Consensus 160 ~~~~~~~~~~~p~~~~~~---------~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~ 229 (421)
T PRK06777 160 PFPGSIFHALYPNELHGV---------SVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCD 229 (421)
T ss_pred CCCCCcEEcCCCccccCc---------CHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 332 33445555311100 12234677888776421 24789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 230 ~ 230 (421)
T PRK06777 230 E 230 (421)
T ss_pred H
Confidence 5
No 52
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=7.9e-26 Score=189.21 Aligned_cols=122 Identities=27% Similarity=0.295 Sum_probs=93.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+||||||.|+ | |.+||+|+++|||+|++++++++.. .++..+.
T Consensus 107 ~~SGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 159 (425)
T PRK07495 107 VTTGAEAVENAVKIARAAT-------------------------G--RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFG 159 (425)
T ss_pred CCchHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCCcCCccHHHhhhcCCCcccccCCC
Confidence 5899999999999999984 4 7889999999999999999999853 3444454
Q ss_pred CC-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PA-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+. .++.++|+|..... ...+.+++.+++++.... .+++|||||+||+||++|++++|++|+++|+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~g---------~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~ 229 (425)
T PRK07495 160 AMMPDVYHVPFPVELHG---------VSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCD 229 (425)
T ss_pred CCCCCeEEecCCccccc---------ccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 43 24556666631110 011234677777776321 24689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 230 ~ 230 (425)
T PRK07495 230 Q 230 (425)
T ss_pred H
Confidence 5
No 53
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=9.4e-26 Score=187.90 Aligned_cols=115 Identities=28% Similarity=0.477 Sum_probs=88.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+||||||+|+..+ |.+ ++ |.+||+|+++|||+|++++++++.+.++..+.+
T Consensus 104 ~~sGseA~e~AlklAr~~~~~~--g~~----------------~~--r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 163 (408)
T PRK04612 104 CNSGTEANEAAIKLVRKWASSQ--GRP----------------AD--KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP 163 (408)
T ss_pred cCchHHHHHHHHHHHHHHHHhh--CCC----------------CC--CcEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 5899999999999999998654 321 23 778999999999999999999987655544433
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +..++|+ ++ ++.+++++. .+++||||+||+|++||++++|++||++|++||++
T Consensus 164 ~~~~~~~~~~-------------~d------~~~l~~~~~-----~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~ 219 (408)
T PRK04612 164 LPGGFRYVDF-------------ND------VEALEAAMA-----GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQ 219 (408)
T ss_pred CCCCceEcCC-------------CC------HHHHHHhhC-----CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 21 1111222 23 455666663 36899999999999999999999999999999985
No 54
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=8.4e-26 Score=189.14 Aligned_cols=116 Identities=20% Similarity=0.298 Sum_probs=86.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||.|+ | |.+||+|+++|||+|.+++++++....+.. .+
T Consensus 115 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~-~~ 166 (428)
T PRK12389 115 VNSGTEAVMTTIRVARAYT-------------------------G--RTKIIKFAGCYHGHSDLVLVAAGSGPSTLG-TP 166 (428)
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEECCCcCCChHHHHHhcCCcccccC-CC
Confidence 5899999999999999994 4 889999999999999999999875422211 01
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++...+.|. ...| ++| ++.++++++++ +++|||||+|||||++|+++||++||++|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~------~~d------~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~ 231 (428)
T PRK12389 167 DSAGVPKSIAQEVITVP------FND------IEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAH 231 (428)
T ss_pred CCCCCCCcccCceEEcC------CCC------HHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 1 0100001111 1222 233 56677778754 4689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 232 ~ 232 (428)
T PRK12389 232 E 232 (428)
T ss_pred H
Confidence 5
No 55
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-25 Score=188.68 Aligned_cols=126 Identities=22% Similarity=0.282 Sum_probs=88.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||.||||||.|+ | |.+||+|+++|||+|.+++++++.. .++..+.
T Consensus 123 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 123 FNSGAEAVENAVKIARSYT-------------------------G--RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred eCCcHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 5899999999999999994 4 7889999999999999999999753 2334443
Q ss_pred CCC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. +...+|+|. ++.+.... ...+.+...+++.+++.+. +++|||||+|||||+||+++||++||++||++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-----~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc 249 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLA-TDGEEAAARAITVIEKQVG-----ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWC 249 (443)
T ss_pred CCCCCceEcCCCcccccccccc-cchHHHHHHHHHHHHHhhC-----CCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 322 233344432 22211000 0011222233444444332 468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 250 ~~ 251 (443)
T PRK06058 250 RE 251 (443)
T ss_pred HH
Confidence 85
No 56
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-25 Score=187.35 Aligned_cols=128 Identities=23% Similarity=0.325 Sum_probs=97.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+||||||||.|||+||.|+ | |.+||+|.++|||+|++++++++.. .++..+.
T Consensus 107 ~~sGsEAve~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 159 (443)
T PRK08360 107 GLSGSDANDGAIKFARAYT-------------------------K--RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVG 159 (443)
T ss_pred cCCHHHHHHHHHHHHHHhc-------------------------C--CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCC
Confidence 5899999999999999994 4 7899999999999999999998853 2333444
Q ss_pred CCCCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAFDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..++.++|+|+ ++.++... .+.+...+++.++++++... .+++|||||+||+||.+|+++||++|+++|+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~ 235 (443)
T PRK08360 160 ELSDVHYIPYPDCYRCPFGKE---PGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILD 235 (443)
T ss_pred CCCCcEEEeCCccccccccCc---hhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 433556677775 33333210 12333456777878876521 24689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 236 ~ 236 (443)
T PRK08360 236 E 236 (443)
T ss_pred H
Confidence 5
No 57
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.93 E-value=2e-25 Score=186.56 Aligned_cols=122 Identities=24% Similarity=0.294 Sum_probs=92.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||+|||+||.|+ | |.+||+|+++|||+|++++++++.. .++..+.
T Consensus 107 ~~sGseA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 159 (421)
T PRK09792 107 FTTGAEAVENAVKIARAHT-------------------------G--RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFG 159 (421)
T ss_pred eCChHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCCccHHHHhhcCCCcccccCCC
Confidence 4799999999999999983 5 7799999999999999999998853 3444444
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+.. ++.++|+|.... . .....+++.+++++++.. .+++|||||+||+||.+|++++|++|+++|+++|+
T Consensus 160 ~~~~~~~~v~~p~~~~----~-----~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~ 229 (421)
T PRK09792 160 PFPGSVYHVPYPSDLH----G-----ISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCD 229 (421)
T ss_pred CCCCCcEEcCCCcccc----c-----ccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 432 344556653110 0 012235778888887421 14689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 230 ~ 230 (421)
T PRK09792 230 E 230 (421)
T ss_pred H
Confidence 5
No 58
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.92 E-value=6.7e-25 Score=180.89 Aligned_cols=118 Identities=21% Similarity=0.285 Sum_probs=89.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||+..|||+||.|| | |.+||.|+|+|||++...+--.++..-..+ .|
T Consensus 115 vnSGTEAtmsAiRlARa~T-------------------------g--R~kIikF~G~YHG~~D~~lv~agsg~~t~g-~p 166 (432)
T COG0001 115 VNSGTEATMSAIRLARAYT-------------------------G--RDKIIKFEGCYHGHSDSLLVKAGSGAATLG-SP 166 (432)
T ss_pred ecchhHHHHHHHHHHHHhh-------------------------C--CCeEEEEcCCCCCCccHHHhhcCcCcccCC-CC
Confidence 5899999999999999995 5 899999999999999887765443211100 01
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. ...+|.-..+ .....+||| ++.+++++++. +++|||||+|||+|+.|+|+|.++||++||+||+|
T Consensus 167 ~--s~Gvp~~~a~--~ti~~~yND------~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e 232 (432)
T COG0001 167 S--SPGVPADVAK--HTLVLPYND------LEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEE 232 (432)
T ss_pred C--CCCCChhhhc--cEEEecCCC------HHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHH
Confidence 1 0111111000 112235688 88999999986 68999999999999999999999999999999986
No 59
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.92 E-value=7.5e-25 Score=180.08 Aligned_cols=107 Identities=29% Similarity=0.432 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||+|.|||+||.|+ | |.+||+|+++|||+|.+++++++.+.++..+.|
T Consensus 87 ~~SGseA~e~Alklar~~~-------------------------g--r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p 139 (364)
T PRK04013 87 GNSGTEAVEAALKFARLYT-------------------------G--RKEIIAMTNAFHGRTMGALSATWKPKYREDFEP 139 (364)
T ss_pred eCchHHHHHHHHHHHHHHh-------------------------C--CCEEEEECCccccCchhhccCCCCcccccCCCC
Confidence 5899999999999999984 4 789999999999999999999987655554443
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++|+ +| .+.+++.+. +++||||+||+||+||+++||++||++||++|++
T Consensus 140 ~~~~~~~~~~-------------~d------~~~l~~~i~------~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~ 194 (364)
T PRK04013 140 LVPGFKHIPF-------------ND------VEAAKEAIT------KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTED 194 (364)
T ss_pred CCCCcEEecC-------------CC------HHHHHHHhc------CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH
Confidence 32 2222222 23 344555553 4899999999999999999999999999999985
No 60
>PLN00144 acetylornithine transaminase
Probab=99.92 E-value=1.3e-24 Score=179.57 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||.|+.++++..++ .++.+|.+||+|+++|||+|++++++++...++..+.+
T Consensus 78 ~~sGseA~e~AlklAr~~~~~~~~~~~~--------------~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 143 (382)
T PLN00144 78 CNSGTEANEAAIKFARKYQRVRAPDKKD--------------PAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEP 143 (382)
T ss_pred eCCcHHHHHHHHHHHHHHHhccCCCCcc--------------ccccccceEEEECCCcccccHHHHhcCCCccccccCCC
Confidence 5899999999999999998654211100 00001678999999999999999999987655544433
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++| ++| ++.+++.+. .++++|||+||+||.||+++++++|+++|++||++
T Consensus 144 ~~~~~~~~~-------------~~d------~~~l~~~~~-----~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~ 199 (382)
T PLN00144 144 LMPGVTFVE-------------YGN------LEAARKLIQ-----KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDE 199 (382)
T ss_pred CCCCeEEeC-------------CCC------HHHHHHhcC-----CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 21 222222 233 456666663 35899999999999999999999999999999985
No 61
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.92 E-value=2.7e-24 Score=180.06 Aligned_cols=127 Identities=22% Similarity=0.389 Sum_probs=94.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcc-ccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKY-IHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~-~~~~~~ 79 (159)
++|||||||.|||+||.|++.+ |. ++ |.+||+|.++|||+|.+++++++... ++..+.
T Consensus 111 ~~sGseA~e~AlklAr~~~~~~--~~-----------------~~--r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 111 ADSGSVAVEVALKMALQYWQAK--GE-----------------KN--RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred eCCcHHHHHHHHHHHHHHHHhh--CC-----------------CC--ccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 5799999999999999998654 32 35 88999999999999999999988532 333333
Q ss_pred CC-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc 157 (159)
+. ..+.++|+|....+. .+ ...++++++++++.+ .+++||||+||| ||+||+++++++||++|+++|
T Consensus 170 ~~~~~~~~~~~p~~~~~~----~~----~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc 238 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDE----EW----NEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALC 238 (427)
T ss_pred ccCCCCeEcCCCCccccc----hh----HHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHH
Confidence 32 233445555322111 11 122367778888764 468999999997 999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 239 ~~ 240 (427)
T TIGR00508 239 KQ 240 (427)
T ss_pred HH
Confidence 85
No 62
>PRK06149 hypothetical protein; Provisional
Probab=99.91 E-value=2e-24 Score=195.79 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=88.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccC-C
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKID-I 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~-~ 79 (159)
+||||||||+||||||.|+ | |.+||+|+++|||+|+++++++++...+... .
T Consensus 647 ~~SGsEA~e~AlklAr~~t-------------------------g--r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~ 699 (972)
T PRK06149 647 VNSGSEANDLAIRLAWAAS-------------------------G--RRDVVSVLEAYHGWTVATDAVSTSIADNPQALE 699 (972)
T ss_pred eCCchHHHHHHHHHHHHhc-------------------------C--CCeEEEEeCCCCCcChhHhhhcCCccccccccC
Confidence 5899999999999999994 4 7899999999999999999997643212111 1
Q ss_pred CCC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PAF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+.. .+..++.|+ +++++... + ....+.+.+++.++.....+++|||||+|||||++|+++||++||++|+++|
T Consensus 700 ~~~~~v~~~~~p~~~~~~~~~~----~-~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc 774 (972)
T PRK06149 700 TRPDWVHPVESPNTYRGRFRGA----D-SAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAV 774 (972)
T ss_pred CCCCCeEEeCCCcccCCcCCCc----c-cHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHH
Confidence 111 233455554 44444211 1 1122333333333321112578999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 775 ~~ 776 (972)
T PRK06149 775 RA 776 (972)
T ss_pred HH
Confidence 85
No 63
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.91 E-value=4.9e-24 Score=180.44 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh--hhhcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG--CLSTTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g--a~s~s~~~~~~~~~ 78 (159)
+||||||||.|||+||.|+ | |.+||+|+++|||+|.. +++.++........
T Consensus 161 ~~SGsEA~e~AlklAR~~t-------------------------g--r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~ 213 (474)
T PLN02482 161 VNSGTEACMGVLRLARAYT-------------------------G--REKIIKFEGCYHGHADSFLVKAGSGVATLGLPD 213 (474)
T ss_pred eCChHHHHHHHHHHHHHhc-------------------------C--CCEEEEECCccCCCcchhhhhcCCCccccCCCC
Confidence 5899999999999999994 5 88999999999998754 33333322111111
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. ..+|.+.. +.....+++| ++.++++|+++ +++|||||+|||||++|+++|+++||++|++||+
T Consensus 214 ~-----~g~~~~~~--~~~~~~~~nd------~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~ 277 (474)
T PLN02482 214 S-----PGVPKAAT--SATLTAPYND------LEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITK 277 (474)
T ss_pred C-----CCCCCCCC--CCeEEecCCC------hHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 1 11121110 0001112344 56778888764 5789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 278 ~ 278 (474)
T PLN02482 278 E 278 (474)
T ss_pred H
Confidence 5
No 64
>PRK07046 aminotransferase; Validated
Probab=99.90 E-value=7.9e-24 Score=178.43 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcC--CCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTT--HSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s--~~~~~~~~~ 78 (159)
+||||||||.|||+||.|+ | |.+||+|+++|||++.+++... +....+..+
T Consensus 136 ~nSGtEA~e~AlrlAR~~T-------------------------G--r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~ 188 (453)
T PRK07046 136 ATTATDANRFVLRWARAVT-------------------------G--RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGL 188 (453)
T ss_pred ECCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCC
Confidence 5899999999999999994 5 8899999999999987776532 221111111
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+ +|. .... .....+|+| ++.+++++. .++|||||+|||||++|+++|+++||++||++|+
T Consensus 189 ~g------~~~-~~~~-~~~~~~~nd------~~~l~~~l~-----~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~ 249 (453)
T PRK07046 189 LG------QVH-DLTA-TTRVVEFND------LAALEAALA-----DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTR 249 (453)
T ss_pred CC------CCc-cccC-ceEeeCCCC------HHHHHHHhC-----CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 10 000 0000 001123455 677777773 3689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
|
T Consensus 250 ~ 250 (453)
T PRK07046 250 R 250 (453)
T ss_pred H
Confidence 5
No 65
>PLN02624 ornithine-delta-aminotransferase
Probab=99.90 E-value=1.8e-23 Score=177.13 Aligned_cols=118 Identities=25% Similarity=0.333 Sum_probs=90.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||.|+..+ +|.. ++ |.+||+|.++|||+|++++++++.+.++..+.|
T Consensus 138 ~~SGseA~e~AlklAr~~~~~~-~g~~----------------~~--~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 198 (474)
T PLN02624 138 MNTGAEGVETAIKLARKWGYEK-KGIP----------------KN--EAIIVSCCGCFHGRTLAAISMSCDNEATRGFGP 198 (474)
T ss_pred eCChHHHHHHHHHHHHHHHHhh-cCCC----------------CC--CcEEEEECCCcCCCCHHHhhcCCCccccccCCC
Confidence 5899999999999999986543 1210 13 678999999999999999999986654444433
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++| ++| ++.++++|+.. ++++||||+||+|+.+|+++||++||++|+++|++
T Consensus 199 ~~~~~~~~~-------------~~d------~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~ 256 (474)
T PLN02624 199 LLPGHLKVD-------------FGD------LDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSK 256 (474)
T ss_pred CCCCceEeC-------------CCC------HHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 32 111121 233 56677777653 47899999999999999999999999999999985
No 66
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.90 E-value=1.3e-23 Score=176.30 Aligned_cols=115 Identities=19% Similarity=0.239 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccc---hhhhhcCCCcccccc
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRT---LGCLSTTHSKYIHKI 77 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T---~ga~s~s~~~~~~~~ 77 (159)
++|||||||.|||+||.|+ | |.+||+|+++|||+| ++++++++.....
T Consensus 116 ~~SGsEA~e~AiklAr~~t-------------------------g--r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~-- 166 (433)
T PRK00615 116 VSSGTEATMTAVRLARGIT-------------------------G--RSIIIKFLGCYHGHADTLLQGISFSETSLDT-- 166 (433)
T ss_pred eCchHHHHHHHHHHHHHhh-------------------------C--CCEEEEEcCccCCCCcccCcccccCCCCcCc--
Confidence 5899999999999999994 5 889999999999998 7788777632110
Q ss_pred CCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 78 DIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 78 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+. ... +.+. .+.....+++| +++++++|+++ .+++||||+|||||.+|+++|+++||++|+++|
T Consensus 167 -~~~--~~~-~~~~--~~~~~~~~~~d------~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc 231 (433)
T PRK00615 167 -LTH--LVD-TDLA--HPLTLSLPYND------FQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTC 231 (433)
T ss_pred -CCC--CCC-CCCC--CCCeEeCCCCC------HHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHH
Confidence 000 000 0110 01111112344 56777888764 468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 232 ~~ 233 (433)
T PRK00615 232 RR 233 (433)
T ss_pred HH
Confidence 85
No 67
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.90 E-value=2.4e-23 Score=172.59 Aligned_cols=113 Identities=30% Similarity=0.374 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||.|++++ +. ++ |.+||+++++|||+|.+++++++.+.++..+.|
T Consensus 98 ~~SGseA~e~Alk~ar~~~~~~--~~-----------------~~--r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 156 (397)
T TIGR03246 98 CNSGAEANEAALKLARRYALDK--HG-----------------AD--KSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAP 156 (397)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 5899999999999999998654 21 34 889999999999999999999986544443333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++| ++| ++.+++.+. ++++|||+||+|+.+|+++||++||++|+++|++
T Consensus 157 ~~~~~~~~~-------------~~d------~~~l~~~l~------~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 211 (397)
T TIGR03246 157 LPGGIKHAP-------------YND------LAAAKALIS------DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDR 211 (397)
T ss_pred CCCceEEeC-------------CCC------HHHHHHHhc------cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 21 111111 233 566666663 3799999999999999999999999999999985
No 68
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.90 E-value=2.7e-23 Score=172.75 Aligned_cols=113 Identities=30% Similarity=0.378 Sum_probs=87.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||+|+..+ +. ++ |.+||+|+++|||+|.+++++++.+.++..+.+
T Consensus 102 ~~sGseA~e~Alk~ar~~~~~~--~~-----------------~~--r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK12381 102 CNSGAEANEAALKLARKYAHDR--YG-----------------SH--KSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAP 160 (406)
T ss_pred cCCcHHHHHHHHHHHHHHHhhc--CC-----------------CC--CCeEEEECCCcCCcchhHHhhcCCcccccCCCC
Confidence 5899999999999999997543 22 24 889999999999999999999987654443333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +.. ..| ++| ++.+++.+. ++++|||+||+|+.||+++||++||++|+++|+|
T Consensus 161 ~~~~~~-------~~~------~~d------~~~l~~~l~------~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~ 215 (406)
T PRK12381 161 LPPDIR-------HAA------YND------LNSASALID------DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDR 215 (406)
T ss_pred CCCCee-------EeC------CCC------HHHHHHhcc------CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHH
Confidence 21 111 111 233 456666653 4799999999999999999999999999999985
No 69
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.89 E-value=4e-23 Score=171.48 Aligned_cols=113 Identities=33% Similarity=0.510 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||+|+.+. + ++ |.+||+|+++|||+|++++++++...++..+.|
T Consensus 99 ~~SGseA~e~Aik~ar~~~~~~--~------------------~~--r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 99 ANSGAEANEGAIKLARKWGRKH--K------------------NG--AYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred eCCcHHHHHHHHHHHHHHhhcc--C------------------CC--CcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 5899999999999999986421 1 34 789999999999999999999986544433332
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +.+. ..++++ ++++++.+. ++++|||+||+||++|+++||++||++|+++|++
T Consensus 157 ~~-------~~~~-----~~~~~d------~~~l~~~l~------~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~ 211 (395)
T PRK03715 157 QV-------PGFP-----KAELND------IASVEKLIT------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQ 211 (395)
T ss_pred CC-------CCce-----eeCCch------HHHHHHHcC------CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 21 1110 001223 566666653 4799999999999999999999999999999985
No 70
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.86 E-value=1.7e-21 Score=162.97 Aligned_cols=122 Identities=27% Similarity=0.325 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++|||||||.|||+||.++ + |.+||+|+++|||+|.+++++++.. .++.++.
T Consensus 108 ~~sGsea~e~Alklar~~~-------------------------~--r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 108 VTTGSEAVENAVKIARAAT-------------------------K--RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred eCCcHHHHHHHHHHHHHHh-------------------------C--CCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4899999999999999984 3 6789999999999999999998742 2333332
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+.. ++..+++|. +. ++...+.+++.+++++.... .++++||||+||+||++|+++++++|+++|+++|+
T Consensus 161 ~~~~~~~~~~~p~---~~------~~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~ 230 (425)
T PRK08088 161 LMPGHVYRALYPC---PL------HGVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCD 230 (425)
T ss_pred CCCCCcEEcCCCc---cc------cCccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 221 222233331 11 11112345777888886321 24789999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 231 ~ 231 (425)
T PRK08088 231 E 231 (425)
T ss_pred H
Confidence 5
No 71
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.84 E-value=8.7e-21 Score=157.41 Aligned_cols=113 Identities=31% Similarity=0.397 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|+|+||.|+.+++ + ++ |.+||+|+++|||+|++++++++.+.+...+.+
T Consensus 103 ~~sGseA~e~a~klar~~~~~~~-~------------------~~--~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~ 161 (403)
T PRK05093 103 ANSGAEANEAAFKLARRYACDRH-G------------------PE--KTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGP 161 (403)
T ss_pred eCchHHHHHHHHHHHHHHHhhcC-C------------------CC--CCeEEEEcCCcCCchhhhHhhcCChhhhhcCCC
Confidence 58999999999999999975431 1 23 889999999999999999999876533322222
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. .+.++ +++| ++++++.+. +++++||+||+++.||+++|+++|+++|+++|++
T Consensus 162 ~~~~~~~~-------------~~~d------~~~l~~~l~------~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~ 216 (403)
T PRK05093 162 KPADITHV-------------PFND------LAAVKAVID------DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQ 216 (403)
T ss_pred CCCCcEEe-------------CCCC------HHHHHHHhc------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 11111 1234 566666653 3699999999999999999999999999999985
No 72
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.84 E-value=1.2e-20 Score=156.30 Aligned_cols=115 Identities=27% Similarity=0.378 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|||+||+|++... |.. +| |.+||+++++|||+|.+++++++.+.++..+.+
T Consensus 103 ~~SGseA~e~Alk~a~~~~~~~~-g~~----------------~~--r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~ 163 (396)
T PRK04073 103 MNTGAEAVETAIKAARRWAYDVK-GVE----------------PN--KAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGP 163 (396)
T ss_pred cCChHHHHHHHHHHHHHHhhhcc-CCC----------------CC--CCEEEEECCCcCCCCHHHHhhcCCcccccCCCC
Confidence 58999999999999999965321 210 34 789999999999999999999986544433333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+ +..++| +++ ++.+++.+. +++++||+||+|+.+|+++++++||++|+++|++
T Consensus 164 ~~~~~~~~~-------------~~d------~~~l~~~i~------~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~ 218 (396)
T PRK04073 164 MLPGIKKIP-------------YGD------LEALKAAIT------PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKE 218 (396)
T ss_pred CCCCceEeC-------------CCC------HHHHHHhcc------cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHH
Confidence 21 111122 123 455665553 3689999999999999999999999999999985
No 73
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.84 E-value=2.2e-20 Score=154.88 Aligned_cols=118 Identities=29% Similarity=0.399 Sum_probs=88.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||||.|||+||.|+.++ ++.. ++ |++|++++++|||+|.+++++++...++..+.+
T Consensus 100 ~~SGs~A~e~ai~~a~~~~~~~-~~~~----------------~~--~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (401)
T TIGR01885 100 MNTGAEAVETAIKLARKWGYKV-KGIP----------------EN--QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGP 160 (401)
T ss_pred eCccHHHHHHHHHHHHHHhhhh-cCCC----------------CC--CCEEEEECCCcCcccHHHHhCcCCcccccccCC
Confidence 5899999999999999997543 1210 23 889999999999999999999876433332222
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ....+ | +++ +++|+++++.. ++++++||+||+++.+|++.|+++||++|+++|++
T Consensus 161 ~~~~~~~~-------~------~~d------~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 161 YVPGFKKI-------P------YNN------LEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred CCCCceEe-------C------CCC------HHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 11111 1 233 56677777654 46899999999999999999999999999999985
No 74
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=2.1e-20 Score=156.46 Aligned_cols=116 Identities=23% Similarity=0.344 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcccc--ccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIH--KID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~--~~~ 78 (159)
++|||||||+|+|+||.|+ | |.+||+|+++|||.|.+++++++..... ..+
T Consensus 112 ~~sGseA~e~Aik~a~~~~-------------------------g--~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 112 VNSGTEATMSAIRLARGYT-------------------------G--RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred ecCHHHHHHHHHHHHHHHh-------------------------C--CCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 5899999999999999984 4 6799999999999999888887643211 111
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+... ..++...+++|+ ++ ++.+++.++.. ++++++||+||+||++|+++|+++||++|++||+
T Consensus 165 ~~~~~-~~~~~~~~~~~~------~d------~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~ 228 (426)
T PRK00062 165 SPGVP-EDFAKHTLTAPY------ND------LEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCD 228 (426)
T ss_pred CCCCC-cccccceEEcCC------CC------HHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 11100 000000122222 33 56677777654 4689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 229 ~ 229 (426)
T PRK00062 229 E 229 (426)
T ss_pred H
Confidence 5
No 75
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.83 E-value=3.9e-20 Score=154.34 Aligned_cols=115 Identities=23% Similarity=0.349 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcccc--ccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIH--KID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~--~~~ 78 (159)
++|||||+|.|+|+||.|+ | |.+||+|+++|||.+..++++++..... ..+
T Consensus 110 ~~sGseA~e~Alk~ar~~~-------------------------g--r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 162 (423)
T TIGR00713 110 VNSGTEATMSAVRLARGYT-------------------------G--RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPT 162 (423)
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEEcCCCCCChhhhhccccCcccccCCCC
Confidence 5899999999999999994 4 7899999999999998888876543111 111
Q ss_pred CCCCCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 79 IPAFDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 79 ~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+.. ...+.+. ++.| +++ ++++++++.++ +++++|||+||+|+++|+++++++||++|+++|
T Consensus 163 ~~~~--~~~~~~~~~~~~------~~d------~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~ 225 (423)
T TIGR00713 163 SPGV--PEDFAKLTLVLP------YND------LEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALT 225 (423)
T ss_pred CCCC--CcccccceEEeC------CCC------HHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 1110 0001111 1112 233 56777788754 468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 226 ~~ 227 (423)
T TIGR00713 226 EE 227 (423)
T ss_pred HH
Confidence 85
No 76
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.81 E-value=2e-19 Score=148.36 Aligned_cols=113 Identities=27% Similarity=0.406 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||+|+|+||.|+... |. ++ |.+||+++++|||++.+++++++.+.++..+.+
T Consensus 94 ~~sGseA~~~al~~ar~~~~~~--G~-----------------~~--r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 152 (389)
T PRK01278 94 TNSGAEAVECAIKTARRYHYGK--GH-----------------PE--RYRIITFEGAFHGRTLATIAAGGQEKYLEGFGP 152 (389)
T ss_pred cCCcHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCCcHHHHhccCChhhcccCCC
Confidence 5899999999999999997543 32 34 789999999999999999999886544333322
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++.++| ++| ++++++.+. ++++|||+||+|+.+|++++|++|+++|+++|+|
T Consensus 153 ~~~~~~~~~-------------~~d------~~~l~~~l~------~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~ 207 (389)
T PRK01278 153 LVPGFDQVP-------------FGD------IEALKAAIT------PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDE 207 (389)
T ss_pred CCCCceEeC-------------CCC------HHHHHHhhC------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 11 111111 123 456666653 3799999999999999999999999999999985
No 77
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=8.6e-19 Score=143.91 Aligned_cols=107 Identities=30% Similarity=0.444 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||||.|+|+||.++ | |.+||+++++|||++++++++++....+..+.+
T Consensus 92 ~~sG~~a~~~A~~~a~~~~-------------------------g--~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~ 144 (377)
T PRK02936 92 CNSGAEANEAALKLARKHT-------------------------G--KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGP 144 (377)
T ss_pred eCCcHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCCCcHHhhhccCCccccccCCC
Confidence 4899999999999999883 4 778999999999999999999876544333333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +..++ | ++| ++++++.+. +++++||+||+|+.+|+++++++||++|+++|++
T Consensus 145 ~~~~~~~~-------~------~~d------~~~l~~~~~------~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~ 199 (377)
T PRK02936 145 LLPGFTHV-------P------FND------IKALKEVMN------EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKK 199 (377)
T ss_pred CCCCceEe-------C------CCC------HHHHHHhcc------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 21 11111 1 123 455666553 4689999999999999999999999999999985
No 78
>KOG1403|consensus
Probab=99.78 E-value=8.5e-20 Score=144.36 Aligned_cols=130 Identities=18% Similarity=0.256 Sum_probs=96.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+|||||||++||||||.|+ + +..+|.++++|||.....|.+|.....+.....
T Consensus 108 ~NSGSEANDLALRLAR~ft-------------------------k--hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~ 160 (452)
T KOG1403|consen 108 VNSGSEANDLALRLARNFT-------------------------K--HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVA 160 (452)
T ss_pred ecCCchhhHHHHHHHHhhc-------------------------c--cCceEEEechhccceeeeeeccceeccCCCCcC
Confidence 5899999999999999994 3 778999999999999888888875433333332
Q ss_pred CCC-CCcccCCC-CCCCCccchhhhh-HHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AFD-WPIASFPK-YKYPLEENERENK-AEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~~-~~~~p~p~-~~~~~~~~~~~~~-~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.++ ++..|.|+ |+.-++... +++ ..+..+.+.++++++.....+..|||||.|.+|+-||-+.||.+||+.+.+..
T Consensus 161 kpd~VHVAPcPDvyrGK~r~~~-~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~V 239 (452)
T KOG1403|consen 161 KPDYVHVAPCPDVYRGKFRDKM-YPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAV 239 (452)
T ss_pred CCceeEecCCcccccccccccc-CCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHH
Confidence 333 34467776 554333211 111 12345677788888776656789999999999999999999999999998876
Q ss_pred c
Q psy4805 158 K 158 (159)
Q Consensus 158 ~ 158 (159)
+
T Consensus 240 r 240 (452)
T KOG1403|consen 240 R 240 (452)
T ss_pred h
Confidence 4
No 79
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.78 E-value=2.4e-18 Score=142.40 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||.|+..+ .|.+ +| |.+||+|.++|||+|.+++++++.+..+..+.+
T Consensus 104 ~~SGs~A~e~al~~a~~~~~~~-~g~~----------------~~--~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~ 164 (401)
T PRK00854 104 MNSGAEAVETAIKAVRKWGYEV-KGVP----------------EG--QAEIIVCADNFHGRTLSIVGFSTDPDARGGFGP 164 (401)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc-cCCC----------------CC--CceEEEECCCcCCccHHHHhccCCccccccCCC
Confidence 5899999999999999986433 1321 34 789999999999999999988876543332322
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +..++|+ +| ++.|++.+. ++++|||+||+++.+|++.+|++||++|+++|++
T Consensus 165 ~~~~~~~~~~-------------~d------~~~le~~i~------~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~ 219 (401)
T PRK00854 165 FTPGFRVVPF-------------GD------AEALEAAIT------PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTA 219 (401)
T ss_pred CCCCeEEeCC-------------CC------HHHHHHHhC------CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 21 1112221 23 456666653 3689999999999999999999999999999985
No 80
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=7.8e-18 Score=138.44 Aligned_cols=108 Identities=28% Similarity=0.341 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||||||+.|||+||.++ + |.+||+++++|||++.+++++++...+...+.+
T Consensus 90 ~~SGseA~~~Al~~ar~~~-------------------------~--~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~ 142 (375)
T PRK04260 90 CNSGAEANEAAIKIARKAT-------------------------G--KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGD 142 (375)
T ss_pred cCccHHHHHHHHHHHHHhc-------------------------C--CCeEEEECCCcCcccHHHHhccCCcccCCCCCC
Confidence 4899999999999999873 3 678999999999999999999876443332222
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+ ..+++ .+ ++| ++.+++.+. +++++||+||+++++|++++|++||++++++|++
T Consensus 143 ~~--~~~~~----~~------~~d------l~~l~~~l~------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~ 197 (375)
T PRK04260 143 GV--PHFSY----AI------FND------LNSVKALVN------KNTAAVMLELVQGESGVLPADKDFVKALADYCQE 197 (375)
T ss_pred CC--CCeEE----eC------CCC------HHHHHHhcC------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHH
Confidence 11 00110 01 123 566666552 4789999999999999999999999999999985
No 81
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.74 E-value=2e-17 Score=136.73 Aligned_cols=117 Identities=26% Similarity=0.334 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||.++..+ +|.+ ++ +.+||+++++|||++.+++++++....+..+.+
T Consensus 94 ~~SGs~A~e~al~~~~~~~~~~-~~~~----------------~~--~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~ 154 (400)
T PTZ00125 94 MNSGAEAGETALKFARKWGYEV-KGIP----------------EN--QAKIIFCNGNFSGRTIGACSASTDPKCYNNFGP 154 (400)
T ss_pred eCCcHHHHHHHHHHHHHHHHhc-cCCC----------------CC--CCeEEEECCCcCCccHHHHhhcCCcchhccCCC
Confidence 5899999999999999885432 1210 12 679999999999999999999875432222222
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
... .+.+. + ++| ++++++.+. .+++++||+||+|+.+|++.++++|+++|+++|++
T Consensus 155 ~~~-~~~~~-----~------~~d------~~~le~~l~-----~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~ 210 (400)
T PTZ00125 155 FVP-GFELV-----D------YND------VEALEKLLQ-----DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKK 210 (400)
T ss_pred CCC-CceEe-----C------CCC------HHHHHHHhC-----CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHH
Confidence 110 00111 1 123 567777774 24799999999999999999999999999999985
No 82
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=9.3e-17 Score=132.83 Aligned_cols=106 Identities=24% Similarity=0.336 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|++|.+ | |.+||.++++|||.+.+++++++.......+.+
T Consensus 109 ~~sgsea~~~al~~~~~~--------------------------g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 109 CNSGAEANEAAFKLARLT--------------------------G--RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred eCchHHHHHHHHHHHHHH--------------------------C--CCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 589999999999999874 3 678999999999999999999875433222222
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. .+..+|+ +| ++.+++.+. +++++||+||+|+.+|+++|+++|+++|+++|++
T Consensus 161 ~~~~~~~~~~-------------~d------~~~l~~~~~------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~ 215 (398)
T PRK03244 161 LPGGVEHVPY-------------GD------VDALAAAVD------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDR 215 (398)
T ss_pred CCCCceEeCC-------------CC------HHHHHHhhc------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 10 1111111 22 455666552 4799999999999999999999999999999985
No 83
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.70 E-value=6.3e-17 Score=135.79 Aligned_cols=105 Identities=17% Similarity=0.275 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEE-cCCCCccchhhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSF-KGAFHGRTLGCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~-~~sYHG~T~ga~s~s~~~~~~~~~~ 79 (159)
+||||||||+||||||.|+ | |.+||+| .++|||........+... ...
T Consensus 110 ~~sGseA~e~AlklAr~~t-------------------------g--r~~i~~~~~~~~h~~~~~~~g~~~~~----~~~ 158 (431)
T PRK06209 110 CKNGSDATSAAVRLARAYT-------------------------G--RDLVARCADHPFFSTDDWFIGTTPMS----AGI 158 (431)
T ss_pred ecCHHHHHHHHHHHHHHHh-------------------------C--CCeEEEeccCccccccccccccCCCC----CCC
Confidence 5899999999999999994 4 7899999 788887432211111000 000
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+. ...+.+ ..++ ++| ++++++++++. ++++||||+||+||. +||++||++|+++|++
T Consensus 159 ~~---~~~~~~-~~~~------~~d------~~~l~~~l~~~---~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~ 215 (431)
T PRK06209 159 PA---SVSALT-VTFR------YND------IASLEALFEDH---PGRIACVILEPATAD----EPQDGFLHEVRRLCHE 215 (431)
T ss_pred Ch---hHhccc-cccC------CCC------HHHHHHHHHhC---CCCEEEEEEccccCC----CCCHHHHHHHHHHHHH
Confidence 00 000000 1111 233 57778888753 468999999999976 7899999999999985
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.62 E-value=2.7e-15 Score=124.06 Aligned_cols=121 Identities=33% Similarity=0.401 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|++++|.++ + +.+||.++++|||++..++++++...+...+.+
T Consensus 102 ~~sgsea~~~al~~~~~~~-------------------------~--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 154 (413)
T cd00610 102 VNSGTEAVEAALKLARAYT-------------------------G--RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGP 154 (413)
T ss_pred cCcHHHHHHHHHHHHHHHc-------------------------C--CCeEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 5899999999999999873 3 678999999999999999998875433322221
Q ss_pred C-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 A-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. ..+..+|++....+ .......++.|++.+..+ ++++++||+||+++.+|+++++++|+++|+++|++
T Consensus 155 ~~~~~~~~~~~~~~~~--------~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~ 223 (413)
T cd00610 155 LLPGVLHVPYPYRYRP--------PAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRK 223 (413)
T ss_pred CCCCcEEeCCCccccc--------hhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 1 12223333210000 001122367787777653 46899999999999999999999999999999985
No 85
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.62 E-value=3.2e-15 Score=123.19 Aligned_cols=112 Identities=29% Similarity=0.388 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+||.++.+. + ..+.+|++++++|||.+..++++++...++..+.+
T Consensus 102 ~~gg~eA~~~al~~a~~~~~~~--~--------------------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 102 CNSGAEANEAAIKLARKYGHKK--G--------------------IEKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred CCCcHHHHHHHHHHHHHHhccc--C--------------------CCCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 5899999999999999985321 1 11478999999999999999999876533322222
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++..+| ++| ++++++.+. +++++||+||+|+.+|+++++++|+++|+++|++
T Consensus 160 ~~~~~~~~~-------------~~d------~~~l~~~i~------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~ 214 (396)
T PRK02627 160 LVEGFIYVP-------------FND------IEALKAAIT------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDE 214 (396)
T ss_pred CCCCceEeC-------------CCC------HHHHHHhcC------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 111111 123 556666652 4799999999999999999999999999999985
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.19 E-value=2.2e-10 Score=93.88 Aligned_cols=112 Identities=35% Similarity=0.504 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|++++|.++... + + ++.+||.+..+|||.+..+...++...+...+.+
T Consensus 90 ~~sg~~a~~~a~~~~~~~~~~~--~------------------~--~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 90 CNSGAEANEAALKLARKYTGDK--G------------------K--EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred eCCcHHHHHHHHHHHHHHhhcc--C------------------C--CCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 4799999999999999875321 1 1 1578999999999999998887764322111111
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +..++ + ++| ++.+++.+. .++.+|++||+++.+|+++++.+++++|.++|++
T Consensus 148 ~~~~~~~~-------~------~~d------~~~l~~~~~------~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~ 202 (379)
T TIGR00707 148 LVPGFSYA-------P------YND------IESLKKAID------DETAAVIVEPIQGEGGVNPASAEFLKALREICKD 202 (379)
T ss_pred CCCCceee-------C------CCC------HHHHHHHhh------hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHH
Confidence 10 00011 1 123 456666654 2578999999999999988899999999999974
No 87
>PRK07505 hypothetical protein; Provisional
Probab=98.78 E-value=1.2e-08 Score=84.66 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
.+||++|++.|||+++.... . ++ +.+||+++++|||... +.......+
T Consensus 111 ~~sG~~a~~~ai~~~~~~~~-~---------------------~~--~~~vi~~~~~~H~s~~------~~~~~~~~~-- 158 (402)
T PRK07505 111 FTSCSAAHLGILPLLASGHL-T---------------------GG--VPPHMVFDKNAHASLN------ILKGICADE-- 158 (402)
T ss_pred ECChHHHHHHHHHHHHhccc-C---------------------CC--CCCEEEEchhhhHhHH------hhhhhhhcC--
Confidence 37999999999999876321 0 13 6689999999998321 111111110
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+..+|+ +| ++.+++.+.. ...+++|+||+++.|++++ +++|+++|++
T Consensus 159 -~~v~~~~~-------------~d------~~~l~~~~~~-----~~~~~vl~~p~~~~G~~~~-----~~~i~~l~~~ 207 (402)
T PRK07505 159 -TEVETIDH-------------ND------LDALEDICKT-----NKTVAYVADGVYSMGGIAP-----VKELLRLQEK 207 (402)
T ss_pred -CeEEEeCC-------------CC------HHHHHHHHhc-----CCCEEEEEecccccCCcCC-----HHHHHHHHHH
Confidence 11122222 22 4556666643 3579999999999977654 7889999974
No 88
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.52 E-value=2.1e-07 Score=77.44 Aligned_cols=94 Identities=15% Similarity=0.117 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHH-HHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYK-NIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~Alk-lA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~ 79 (159)
++||++||+.|++ +++.+ +..+|.++..|||.+..++..++...
T Consensus 111 ~~SG~~An~~ai~~l~~~~-----------------------------~g~~I~~~~~~H~s~~~~~~~~g~~~------ 155 (406)
T PRK13393 111 FTSGYVSNWAALSTLGSRL-----------------------------PGCVILSDELNHASMIEGIRHSRAEK------ 155 (406)
T ss_pred eCCcHHHHHHHHHHhhcCC-----------------------------CCCEEEEccchhHHHHHHHHHcCCeE------
Confidence 4799999999999 56432 23588999999999988877654210
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+|. +| .+.+++.+.... ..++.+|++|++++..|.+.| +++|+++|++
T Consensus 156 -----~~~~~-------------~d------~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~ 205 (406)
T PRK13393 156 -----RIFRH-------------ND------PADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP----IAEICDVAEK 205 (406)
T ss_pred -----EEeCC-------------CC------HHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC----HHHHHHHHHH
Confidence 11121 12 234455554321 246789999999999998876 8999999974
No 89
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.07 E-value=8.9e-06 Score=67.50 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
.+||++||+.||++++.+. +..+|..+..||+.+...+..++...
T Consensus 111 ~~sG~~an~~ai~~l~~~~----------------------------~~~~v~~~~~~h~s~~~~~~~~g~~~------- 155 (402)
T TIGR01821 111 FTSGYVANDATLATLAKII----------------------------PGCVIFSDELNHASMIEGIRHSGAEK------- 155 (402)
T ss_pred ECchHHHHHHHHHHhhCCC----------------------------CCCEEEEcchHhHHHHHHHHHcCCeE-------
Confidence 3799999999999886431 23577777889999877766554221
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..++. +| .+++++++... ..+.+..|++|++++..|.+.| +++|+++|++
T Consensus 156 ----~~~~~-------------~d------~~~l~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~ 205 (402)
T TIGR01821 156 ----FIFRH-------------ND------VAHLEKLLQSV--DPNRPKIIAFESVYSMDGDIAP----IEEICDLADK 205 (402)
T ss_pred ----EEECC-------------CC------HHHHHHHHHhc--cCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHH
Confidence 00111 12 34455666543 1235789999999999998765 8899999974
No 90
>PRK09064 5-aminolevulinate synthase; Validated
Probab=97.72 E-value=9.1e-05 Score=61.51 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.++++++.. ..+++.+|++|++++..|.+.+ +++|+++|++
T Consensus 164 ~~~le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~ 206 (407)
T PRK09064 164 VAHLEELLAAA--DPDRPKLIAFESVYSMDGDIAP----IAEICDLADK 206 (407)
T ss_pred HHHHHHHHHhc--cCCCCeEEEEeCCCCCCccccC----HHHHHHHHHH
Confidence 34566666542 1246789999999999998765 8899999974
No 91
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=97.61 E-value=0.00033 Score=57.75 Aligned_cols=100 Identities=10% Similarity=-0.014 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|+++.+.++++++.. ++ +...|.+...|||.+..++.+.+... +
T Consensus 88 ~~g~~~~~~~~~~~~~~-------------------------~~--~gd~Vl~~~~~h~~~~~~~~~~~~~~---g---- 133 (398)
T cd00613 88 DEATAAAEAAGLAAIRA-------------------------YH--KRNKVLVPDSAHPTNPAVARTRGEPL---G---- 133 (398)
T ss_pred CchHHHHHHHHHHHHhc-------------------------cc--CCCEEEEcCccCcchHHHHHHhcccC---C----
Confidence 46777888888887643 11 22455577889999998888776321 0
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+..+|.+.. . . .+ ++++++.+. +++++||+++.. ..|++ .++|++|+++|++
T Consensus 134 ~~~~~v~~~~~---~--~---~d------~~~l~~~i~------~~t~~viv~~~~-~~G~~---~~~l~~i~~la~~ 187 (398)
T cd00613 134 IEVVEVPSDEG---G--T---VD------LEALKEEVS------EEVAALMVQYPN-TLGVF---EDLIKEIADIAHS 187 (398)
T ss_pred cEEEEeccCCC---C--C---cC------HHHHHHhcC------CCeEEEEEECCC-CCcee---cchHHHHHHHHHh
Confidence 11122332110 0 0 12 455655542 468999999865 56876 3789999999985
No 92
>PLN02822 serine palmitoyltransferase
Probab=97.54 E-value=0.00042 Score=59.32 Aligned_cols=78 Identities=17% Similarity=0.200 Sum_probs=48.6
Q ss_pred CceEEEEcCCCCccchhhhhcCCCccccccCCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccC---
Q psy4805 48 NLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKK--- 124 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~--- 124 (159)
+..+|.++..||+.+..++.+++... ..++. +| .+.++..++.....
T Consensus 192 ~gd~Ii~d~~~H~s~~~~~~ls~~~~-----------~~~~~-------------nd------~~~l~~~l~~~~~~~~~ 241 (481)
T PLN02822 192 KGDIIVADEGVHWGIQNGLYLSRSTI-----------VYFKH-------------ND------MESLRNTLEKLTAENKR 241 (481)
T ss_pred CCCEEEEeCCccHHHHHHHHHcCCeE-----------EEECC-------------CC------HHHHHHHHHHHhhhhcc
Confidence 55677799999999887777775321 11111 12 11222222221100
Q ss_pred CCCe-EEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 125 GTPV-AGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 125 ~~~v-AAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..++ ++||+|++++..|.+.+ |++|+++|++
T Consensus 242 ~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k 273 (481)
T PLN02822 242 KKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEK 273 (481)
T ss_pred cCCCcEEEEEecCCCCCCCccC----HHHHHHHHHH
Confidence 1234 89999999999998876 8999999975
No 93
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=96.99 E-value=0.0018 Score=53.96 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=24.8
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++..+|++|++.+..|.+.+ +++|+++|++
T Consensus 177 ~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~ 206 (410)
T PRK13392 177 DRPKLIAFESVYSMDGDIAP----IEAICDLADR 206 (410)
T ss_pred CCCEEEEEeCCCCCCccccc----HHHHHHHHHH
Confidence 46788999999998898765 8888888874
No 94
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=96.69 E-value=0.0087 Score=49.23 Aligned_cols=78 Identities=22% Similarity=0.205 Sum_probs=50.1
Q ss_pred CceEEEEcCCCCccchhhhhcCCCccccccCCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCC
Q psy4805 48 NLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTP 127 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~ 127 (159)
+..+|.++..+|+.++.++.... ... ++++. +| ++++++++.........
T Consensus 94 ~~d~ii~d~~~H~sv~~~~~~~~--~~~-----------~~~~~-----------~d------~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 94 VTDYVLWDEQVHISVVYSLSVIS--GWH-----------QSFRH-----------ND------LDHLESLLESCRQRSFG 143 (370)
T ss_pred CCCEEEEEhhhhHHHHHHHHHcC--Cce-----------EEecC-----------CC------HHHHHHHHHhhhccCCC
Confidence 45788899999999988776532 110 11211 12 45566666643111123
Q ss_pred eEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 128 VAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 128 vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
-..|++|++.+..|.+.| +++|.++|++
T Consensus 144 ~~~v~v~~v~s~~G~i~p----l~eI~~l~~~ 171 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAP----LEQIIALSKK 171 (370)
T ss_pred cEEEEEecCCCCCCCccC----HHHHHHHHHH
Confidence 446889999999998876 8888888874
No 95
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=96.68 E-value=0.01 Score=48.41 Aligned_cols=42 Identities=26% Similarity=0.380 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+... ....+.+++++++...|.+.+ +++|.++|++
T Consensus 155 ~~~l~~~i~~~---~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~ 196 (385)
T PRK05958 155 VDALEALLAKW---RAGRALIVTESVFSMDGDLAP----LAELVALARR 196 (385)
T ss_pred HHHHHHHHHhc---cCCCeEEEEEecccCCCCcCC----HHHHHHHHHH
Confidence 45566666542 235789999999887786543 8899999874
No 96
>PRK07179 hypothetical protein; Provisional
Probab=96.56 E-value=0.012 Score=49.04 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.. ...++|++|++++..|.+.| +++|.++|++
T Consensus 170 ~~~l~~~l~~-----~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~ 209 (407)
T PRK07179 170 VDHLRRQIER-----HGPGIIVVDSVYSTTGTIAP----LADIVDIAEE 209 (407)
T ss_pred HHHHHHHHHh-----cCCeEEEECCCCCCCCcccc----HHHHHHHHHH
Confidence 5667777753 24678999999999998776 7889999874
No 97
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=96.46 E-value=0.012 Score=48.16 Aligned_cols=42 Identities=12% Similarity=0.236 Sum_probs=29.2
Q ss_pred HHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 112 AEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 112 ~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+.+++.+.... ..+..+|++++++...|.+.+ +++|.++|++
T Consensus 150 ~~l~~~l~~~~--~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~ 191 (385)
T TIGR01825 150 DDLDRVLRENP--SYGKKLIVTDGVFSMDGDVAP----LPEIVELAER 191 (385)
T ss_pred HHHHHHHHhhc--cCCCeEEEEecCCcCCCCccC----HHHHHHHHHH
Confidence 34555554421 236789999999998887654 6888888874
No 98
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=95.71 E-value=0.039 Score=39.09 Aligned_cols=31 Identities=32% Similarity=0.405 Sum_probs=24.1
Q ss_pred CCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 125 GTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 125 ~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+++++++++.....|...+. ++|.++|++
T Consensus 90 ~~~~~~v~~~~~~~~~g~~~~~----~~l~~~~~~ 120 (170)
T cd01494 90 KPNVALIVITPNTTSGGVLVPL----KEIRKIAKE 120 (170)
T ss_pred cCceEEEEEecCcCCCCeEcCH----HHHHHHHHH
Confidence 3589999999999888876653 777777763
No 99
>PLN02721 threonine aldolase
Probab=95.27 E-value=0.14 Score=41.26 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhccC-CCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKK-GTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~-~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+.+.... ..+..+|++|+.+.+.|-..++.+.+++|.++|++
T Consensus 120 ~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 120 LDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred HHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 56677777643110 14678999999887744456788999999999974
No 100
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=94.49 E-value=0.11 Score=41.27 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=27.8
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.+|++++.+...|++ .|.+.+++|.++|++
T Consensus 131 ~~~~~v~i~~~~~~tG~~-~~~~~l~~l~~~~~~ 163 (350)
T cd00609 131 PKTKLLYLNNPNNPTGAV-LSEEELEELAELAKK 163 (350)
T ss_pred ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHh
Confidence 578999999988778875 578899999999974
No 101
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=93.82 E-value=0.26 Score=39.50 Aligned_cols=43 Identities=26% Similarity=0.304 Sum_probs=29.5
Q ss_pred HHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 112 AEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 112 ~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+.+++++.... .+...+.|++++++...|+..+ +++|.++|++
T Consensus 118 ~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~ 160 (349)
T cd06454 118 EDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKK 160 (349)
T ss_pred HHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC----HHHHHHHHHH
Confidence 34555665421 1246789999999888887643 6888899875
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=93.65 E-value=0.53 Score=37.81 Aligned_cols=43 Identities=26% Similarity=0.343 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+.... ..+.+.++++++....|.+.+ +++|.++|++
T Consensus 132 ~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~ 174 (360)
T TIGR00858 132 VEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAP----LPQLVALAER 174 (360)
T ss_pred HHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC----HHHHHHHHHH
Confidence 455666665421 135688888888776675543 6888888874
No 103
>PLN02880 tyrosine decarboxylase
Probab=92.69 E-value=1.4 Score=38.11 Aligned_cols=115 Identities=9% Similarity=-0.113 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
.+|||||-.||..||.+..+. .|. .+ .+..+|.....-|-.-.=+..+.|....
T Consensus 153 sggs~anl~al~~AR~~~~~~-~g~-----------------~~-~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~------- 206 (490)
T PLN02880 153 GTASEAVLVVLLAARDRVLRK-VGK-----------------NA-LEKLVVYASDQTHSALQKACQIAGIHPE------- 206 (490)
T ss_pred CccHHHHHHHHHHHHHHHHHH-hcc-----------------cc-cCCeEEEEcCCchHHHHHHHHHcCCCHH-------
Confidence 578999999999999876433 121 11 1223444444347665555555554311
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.... ..+. -+ .+.|++.|++....+..+.+||.--..-..|.+.| +++|.++|++
T Consensus 207 -~v~~Vp~d~~-~~~~-----md------~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~ 267 (490)
T PLN02880 207 -NCRLLKTDSS-TNYA-----LA------PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKS 267 (490)
T ss_pred -HEEEeecCCC-cCCc-----CC------HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHH
Confidence 1122333210 0011 02 45666666543222345667776655555566654 6778888864
No 104
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=92.29 E-value=0.62 Score=37.77 Aligned_cols=18 Identities=17% Similarity=0.006 Sum_probs=14.7
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+++|+||+..|++.++..
T Consensus 82 ~~ggt~a~~~a~~~~~~~ 99 (371)
T PRK13520 82 TSGGTEANIQAVRAARNL 99 (371)
T ss_pred ecCcHHHHHHHHHHHHhh
Confidence 368999999999988654
No 105
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=92.23 E-value=0.43 Score=40.36 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.+|++|....-.|.+.+ +++|.++|++
T Consensus 133 ~e~le~ai~------~~tklV~lesp~NPtG~v~d----l~~I~~la~~ 171 (425)
T PRK06084 133 IAALEALID------ERTKAVFCESIGNPAGNIID----IQALADAAHR 171 (425)
T ss_pred HHHHHHHhc------cCCcEEEEeCCCCCCCeecC----HHHHHHHHHH
Confidence 455666664 24678899988777776654 6888888864
No 106
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=92.07 E-value=0.57 Score=38.30 Aligned_cols=45 Identities=18% Similarity=0.266 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.+++.+........++.+|++++++...|.+. .+++|.++|++
T Consensus 158 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~----~~~~l~~la~~ 202 (397)
T PRK06939 158 MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA----PLPEICDLADK 202 (397)
T ss_pred HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC----CHHHHHHHHHH
Confidence 3445555543211123678899998988878633 48888998874
No 107
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=91.60 E-value=0.26 Score=41.49 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. ++..+|++|....-.|.+. + +++|.++|++
T Consensus 132 ~~~l~~~l~------~~t~~V~le~p~NPtg~v~-d---l~~I~~la~~ 170 (418)
T TIGR01326 132 PEEFEKAID------ENTKAVFAETIGNPAINVP-D---IEAIAEVAHA 170 (418)
T ss_pred HHHHHHhcC------cCCeEEEEECCCCCCCeec-C---HHHHHHHHHH
Confidence 455555553 3567888887766556544 3 6788888864
No 108
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=91.45 E-value=1.9 Score=40.26 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=61.9
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++||.|.-++|..+|.|...+ |+ + ++.++....+-||.-..+....|..
T Consensus 553 ~aGA~gE~agL~aiR~y~~~r--ge------------------~--~R~~vlip~saHgtnPasa~~~G~~--------- 601 (939)
T TIGR00461 553 NSGAQGEYAGLRVIRSYHESR--GE------------------N--HRNICLIPVSAHGTNPASAAMAGMQ--------- 601 (939)
T ss_pred chHHHHHHHHHHHHHHHHHhc--CC------------------C--CCCEEEEEccccCcCHHHHHHCCCE---------
Confidence 467777777899999987544 43 1 4466777788999987765554421
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.. .... -| +++|++.++.+ ++++++|++-=..- -|++.++ ++++.++|++
T Consensus 602 --Vv~V~~d----~~G~----iD------le~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~ 656 (939)
T TIGR00461 602 --VVPVNCD----QDGN----ID------LVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPT---IQHACDIVHS 656 (939)
T ss_pred --EEEeccC----CCCC----cC------HHHHHHHHhhc---CCceEEEEEEeCCc-Cceeccc---HHHHHHHHHH
Confidence 1122221 0000 12 67777777653 35788888753222 4666554 6667776653
No 109
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=91.45 E-value=0.38 Score=40.67 Aligned_cols=39 Identities=23% Similarity=0.393 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.+++.+. .++.+|++|....-.|.+.+ +++|.++|++
T Consensus 138 ~~~l~~ai~------~~tklV~vesp~NptG~v~d----l~~I~~la~~ 176 (427)
T PRK05994 138 PASFERAIT------PRTKAIFIESIANPGGTVTD----IAAIAEVAHR 176 (427)
T ss_pred HHHHHHhcC------cCCeEEEEECCCCCCCeecC----HHHHHHHHHH
Confidence 344555553 25778889987777776654 6788888864
No 110
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=91.34 E-value=0.42 Score=39.35 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++.+|++|.+..-.|.+.+ +++|.++|++
T Consensus 115 ~~~l~~~i~------~~~~~v~~e~~~np~g~~~d----l~~i~~la~~ 153 (369)
T cd00614 115 PEALEAAIK------PETKLVYVESPTNPTLKVVD----IEAIAELAHE 153 (369)
T ss_pred HHHHHHhcC------CCCeEEEEECCCCCCCeecC----HHHHHHHHHH
Confidence 445555553 25678999988877776554 7788888864
No 111
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=91.00 E-value=0.62 Score=37.46 Aligned_cols=48 Identities=15% Similarity=0.155 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccC-CCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSE-GGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~-gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.....-..+++.|.+|--.-. || .+++.+.+++|+++|++
T Consensus 108 ~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG-~~~s~~el~ai~~~a~~ 156 (290)
T PF01212_consen 108 PEDLEAAIEEHGAHHPQPAVVSLENTTELAGG-TVYSLEELRAISELARE 156 (290)
T ss_dssp HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTS-B---HHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccCCCccEEEEEecCcCCCC-eeCCHHHHHHHHHHHHh
Confidence 56677777764211357999999965544 45 56788999999999984
No 112
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=90.05 E-value=0.91 Score=37.16 Aligned_cols=39 Identities=26% Similarity=0.278 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++++.+. ++...+++.-++...|.+.+ +++|.++|++
T Consensus 126 ~~~l~~~i~------~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~ 164 (379)
T TIGR03402 126 LEELRAAIT------DDTALVSVMWANNETGTIFP----IEEIGEIAKE 164 (379)
T ss_pred HHHHHHhcC------CCcEEEEEEcccCCeeeccc----HHHHHHHHHH
Confidence 455555553 24566667767777777665 3567777764
No 113
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=89.94 E-value=0.59 Score=38.94 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=24.9
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+...||+||+++.+|.+++ +++++++|++
T Consensus 138 ~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~ 166 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAP----LKELVALKEE 166 (392)
T ss_pred CcEEEEEcCCcCCCCcccC----HHHHHHHHHH
Confidence 4578999999999998876 8899999975
No 114
>PRK12566 glycine dehydrogenase; Provisional
Probab=89.34 E-value=1.3 Score=41.23 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+||+.|.-++|...|.|+..+ |+ ++ |+ ++....+=||....++...|..
T Consensus 566 ~sGA~gE~A~Lmair~yh~~~--Ge-----------------~~--r~-~vLIp~saHgtNpasa~~~Gie--------- 614 (954)
T PRK12566 566 NSGAQGEYAGLLAIRRYHRSR--GQ-----------------SQ--RD-ICLIPSSAHGTNPASAQMAGMR--------- 614 (954)
T ss_pred CchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CC-EEEecccccccCHHHHHHCCCE---------
Confidence 578888878888888887665 54 23 44 4555557787776654443321
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|.. +.. . -| +++|++.+++. .++++||++--... +|++. .-+++|.++|+
T Consensus 615 --Vv~Vp~D----~~G-~---iD------le~L~a~I~~~---~~~laaVmiT~Pnt-~Gv~e---~~V~eI~~iah 668 (954)
T PRK12566 615 --VVIVECD----PDG-N---VD------LDDLKAKAAAA---GDRLSCLMITYPST-HGVYE---EGIREICEVVH 668 (954)
T ss_pred --EEEeccC----CCC-C---cC------HHHHHHHhhcc---CCCEEEEEEEecCc-Cceec---chHHHHHHHHH
Confidence 1122221 000 0 12 67788887644 46899888864333 34432 34566666665
No 115
>PLN02955 8-amino-7-oxononanoate synthase
Probab=89.32 E-value=0.67 Score=39.93 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|+++++.+ .++.+.||+|+|.+..|.+.| |++|++||++
T Consensus 236 ~~~Le~~L~~~---~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~ 277 (476)
T PLN02955 236 MYHLNSLLSSC---KMKRKVVVTDSLFSMDGDFAP----MEELSQLRKK 277 (476)
T ss_pred HHHHHHHHHhC---CCCceEEEEeCCCCCCCCcCC----HHHHHHHHHH
Confidence 67788888765 345688999999998888766 8888888864
No 116
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=89.20 E-value=1.2 Score=37.91 Aligned_cols=36 Identities=8% Similarity=0.176 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+. +++.+||+.+..|. +..+++|+++|++
T Consensus 149 ~~~le~~i~------~~tkaVi~~~~~G~-------p~dl~~I~~la~~ 184 (438)
T PRK15407 149 ASLLEAAVS------PKTKAIMIAHTLGN-------PFDLAAVKAFCDK 184 (438)
T ss_pred HHHHHHHcC------cCCeEEEEeCCCCC-------hhhHHHHHHHHHH
Confidence 455665553 36788999887553 3468999999974
No 117
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=88.73 E-value=4.4 Score=32.41 Aligned_cols=18 Identities=28% Similarity=-0.134 Sum_probs=15.5
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+++|++|+..|++.++..
T Consensus 63 t~ggt~a~~~al~~~~~~ 80 (345)
T cd06450 63 TSGGSESNLLALLAARDR 80 (345)
T ss_pred eCChhHHHHHHHHHHHHH
Confidence 478999999999998764
No 118
>PLN03032 serine decarboxylase; Provisional
Probab=87.91 E-value=5 Score=33.45 Aligned_cols=18 Identities=17% Similarity=0.012 Sum_probs=15.6
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+.+|||||-.|++.||.+
T Consensus 91 TsGGTEaNl~al~~ar~~ 108 (374)
T PLN03032 91 TTCGTEGNLHGILVGREV 108 (374)
T ss_pred eCchHHHHHHHHHHHHHh
Confidence 468999999999999875
No 119
>PLN02651 cysteine desulfurase
Probab=86.96 E-value=1.9 Score=35.21 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+++++.+. ++...+++.-+....|++.+ +++|.++|+
T Consensus 128 ~~~l~~~i~------~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~ 165 (364)
T PLN02651 128 LDELAAAIR------PDTALVSVMAVNNEIGVIQP----VEEIGELCR 165 (364)
T ss_pred HHHHHHhcC------CCcEEEEEECCCCCceeccc----HHHHHHHHH
Confidence 345555553 24566677666666776655 556666665
No 120
>PLN02590 probable tyrosine decarboxylase
Probab=86.85 E-value=8.7 Score=33.74 Aligned_cols=20 Identities=5% Similarity=-0.371 Sum_probs=17.2
Q ss_pred CCCcchHHHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIWYQ 20 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~ 20 (159)
+.+|||||-.||..||.+..
T Consensus 200 ~sGgSeAnl~al~aAR~~~~ 219 (539)
T PLN02590 200 QGTGCEAVLVVVLAARDRIL 219 (539)
T ss_pred cCchHHHHHHHHHHHHHHHH
Confidence 35799999999999999754
No 121
>PLN02263 serine decarboxylase
Probab=86.68 E-value=6.8 Score=33.80 Aligned_cols=18 Identities=17% Similarity=-0.018 Sum_probs=16.3
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+++|||||-.||+.||.+
T Consensus 158 tsGGTEaNL~Al~aARe~ 175 (470)
T PLN02263 158 TNCGTEGNLHGILVGREV 175 (470)
T ss_pred eCcHHHHHHHHHHHHHhh
Confidence 468999999999999987
No 122
>PRK14012 cysteine desulfurase; Provisional
Probab=86.17 E-value=2.2 Score=35.38 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.|++.+. .+..++++.-++...|++.+ +++|.++|++
T Consensus 134 ~~~l~~~i~------~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~ 172 (404)
T PRK14012 134 LEKLEAAMR------DDTILVSIMHVNNEIGVIQD----IAAIGEICRE 172 (404)
T ss_pred HHHHHHhcC------CCCEEEEEECcCCCccchhh----HHHHHHHHHH
Confidence 455555553 23456777777766776654 5677777753
No 123
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=86.04 E-value=1.4 Score=36.52 Aligned_cols=29 Identities=14% Similarity=0.084 Sum_probs=19.6
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|++|......|.+. -+++|.++|++
T Consensus 139 ~tklV~le~p~np~g~~~----dl~~I~~la~~ 167 (380)
T TIGR01325 139 NTKLVFVETPSNPLGELV----DIAALAELAHA 167 (380)
T ss_pred CceEEEEECCCCCCCeee----CHHHHHHHHHH
Confidence 567888887665555443 26788888764
No 124
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=85.15 E-value=2.5 Score=35.05 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=19.3
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+...+++..++...|++.+ +++|.++|++
T Consensus 142 ~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~ 170 (402)
T TIGR02006 142 DTILVSIMHVNNEIGVIQD----IAAIGEICRE 170 (402)
T ss_pred CCEEEEEECCCcCceeccc----HHHHHHHHHH
Confidence 4567777777777777654 5666776653
No 125
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=85.04 E-value=3.7 Score=32.81 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=9.3
Q ss_pred CCcchHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNI 15 (159)
Q Consensus 2 ~sGseA~e~AlklA 15 (159)
.+||++++.++...
T Consensus 57 ~~gt~~l~~~~~~~ 70 (355)
T TIGR03301 57 GSGTFAVEATIGSL 70 (355)
T ss_pred CCcHHHHHHHHHhc
Confidence 46777777777543
No 126
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=84.84 E-value=1.6 Score=35.05 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=24.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccch
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTL 63 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ 63 (159)
++||++|++.+++..+. . + ...||....+||+...
T Consensus 39 ~~sgt~al~~~l~~l~~-------~------------------~---gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 39 VSSGTAALHLALRALGI-------G------------------P---GDEVIVPSFTFVATAN 73 (352)
T ss_pred ECCHHHHHHHHHHHcCC-------C------------------C---CCEEEeCCcchHHHHH
Confidence 36899999998875521 1 1 4579999999987643
No 127
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=84.82 E-value=5.4 Score=31.72 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcc-CCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNK-KGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~-~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+..... ...+..+|+++....-||++ +...+++|.++|++
T Consensus 110 ~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~--~~~~l~~i~~~~~~ 157 (338)
T cd06502 110 PEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVY--PLDELKAISALAKE 157 (338)
T ss_pred HHHHHHHhhccCCCcCCcceEEEEEeecCCcccc--CHHHHHHHHHHHHH
Confidence 4566666653100 01256778888655555544 78899999999964
No 128
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=84.34 E-value=13 Score=32.47 Aligned_cols=19 Identities=16% Similarity=-0.088 Sum_probs=16.8
Q ss_pred CCCcchHHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIWY 19 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~ 19 (159)
+.+||+||-.||..||...
T Consensus 165 tsGGS~ANl~Al~~AR~~~ 183 (522)
T TIGR03799 165 CSGGTVANITALWVARNRL 183 (522)
T ss_pred cCchHHHHHHHHHHHHHHh
Confidence 4689999999999999874
No 129
>PRK05367 glycine dehydrogenase; Provisional
Probab=84.20 E-value=6.2 Score=37.05 Aligned_cols=47 Identities=13% Similarity=0.185 Sum_probs=30.4
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTH 70 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~ 70 (159)
++||.|+..+|..+|.|...+ |. + ++.+|....+=||....++...|
T Consensus 565 ~~ga~ge~agL~a~r~~~~~~--G~------------------~--~r~~vlis~~aH~snp~sa~~~G 611 (954)
T PRK05367 565 NAGAQGEYAGLLAIRAYHESR--GE------------------G--HRDVCLIPSSAHGTNPASAVMAG 611 (954)
T ss_pred cHHHHHHHHHHHHHHHHhhcc--CC------------------C--CCCEEEEEchhhhhhHHHHHHCC
Confidence 568888888898888775433 32 1 33455566777888776655544
No 130
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=83.29 E-value=12 Score=35.24 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
|+|+.+-++-+.++|.|.+.+ |. + ++.+|...-+=||.-..++...|..
T Consensus 591 naga~ge~a~~~vi~~~~~~~--Gd------------------~--~r~~vli~~~aH~sn~a~a~~~G~~--------- 639 (993)
T PLN02414 591 NAGAAGEYAGLMVIRAYHLSR--GD------------------H--HRNVCIIPVSAHGTNPASAAMCGMK--------- 639 (993)
T ss_pred CCcHHHHHHHHHHHHHHHhcc--CC------------------C--CCCEEEeCCCcCccCHHHHHHCCCE---------
Confidence 567777777777888885432 32 2 3456666778899988777664321
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... .. .-| +++|++.+..+ .+++++|++-=....||++.+ +++|.++|+
T Consensus 640 --vv~v~~d~----~G----~vD------le~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah 693 (993)
T PLN02414 640 --IVVVGTDA----KG----NIN------IEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG----IDEICDIIH 693 (993)
T ss_pred --EEEeccCC----CC----CcC------HHHHHHHHhcc---CCCeEEEEEECCCccccccch----HHHHHHHHH
Confidence 22233311 00 012 67787887643 347888888655555666543 556666654
No 131
>PRK07777 aminotransferase; Validated
Probab=82.91 E-value=5.6 Score=32.64 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++.+|++...+.-.|.+. +.+.+++|.++|++
T Consensus 149 ~~~l~~~~~------~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~ 190 (387)
T PRK07777 149 LDALRAAVT------PRTRALIVNSPHNPTGTVL-TAAELAAIAELAVE 190 (387)
T ss_pred HHHHHHhcC------cccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHh
Confidence 455655543 2456777776677778755 78899999999974
No 132
>PRK02769 histidine decarboxylase; Provisional
Probab=81.54 E-value=16 Score=30.43 Aligned_cols=18 Identities=11% Similarity=-0.222 Sum_probs=14.8
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+++|||||-.|+..||.+
T Consensus 90 TsGgTean~~a~~~ar~~ 107 (380)
T PRK02769 90 TNGGTEGNLYGCYLAREL 107 (380)
T ss_pred ecChHHHHHHHHHHHHHh
Confidence 357899999999998875
No 133
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=80.60 E-value=4 Score=34.88 Aligned_cols=48 Identities=15% Similarity=0.183 Sum_probs=38.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHS 71 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~ 71 (159)
|+|+..=-+.|-+.|+|+..+ |+ + .+.++-...|=||.-..+.++.|.
T Consensus 132 ~AGAqGE~aGll~Ir~YHe~r--G~------------------~--~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 132 NAGAQGEYAGLLAIRAYHESR--GE------------------G--HRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred CCCcchhhHHHHHHHHHHHHc--CC------------------C--cCcEEEeeccccCCChhhHhhcCc
Confidence 578888888999999998776 54 2 566777888999999888887764
No 134
>KOG1549|consensus
Probab=80.56 E-value=6.5 Score=33.47 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.|+ .+..+|++.-+...-|+..| +++|-++|++
T Consensus 171 ~~~~~~~i~------~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~ 209 (428)
T KOG1549|consen 171 ISKLREAIR------SKTRLVSIMHVNNEIGVLQP----VKEIVKICRE 209 (428)
T ss_pred HHHHHHhcC------CCceEEEEEecccCcccccc----HHHHHHHhCc
Confidence 566666664 47889999999999998877 5666667764
No 135
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=80.23 E-value=4.3 Score=34.76 Aligned_cols=47 Identities=26% Similarity=0.260 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|... +++++.+||++.-....|-.+.+.+.+++|+++|++
T Consensus 163 ~e~Le~~i~~~--~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~ 209 (460)
T PRK13238 163 LEKLEALIEEV--GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKK 209 (460)
T ss_pred HHHHHHHHhhc--CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 67788888653 135789999996555544346678999999999985
No 136
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=78.11 E-value=5 Score=34.08 Aligned_cols=14 Identities=14% Similarity=0.083 Sum_probs=11.6
Q ss_pred CCCcchHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKN 14 (159)
Q Consensus 1 ~~sGseA~e~Alkl 14 (159)
++||++|+.+|+..
T Consensus 85 ~sSGt~Al~~al~~ 98 (433)
T PRK08134 85 TASGQAALHLAIAT 98 (433)
T ss_pred eCCHHHHHHHHHHH
Confidence 47999999998864
No 137
>PRK07682 hypothetical protein; Validated
Probab=76.27 E-value=11 Score=30.85 Aligned_cols=42 Identities=19% Similarity=0.186 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.++++..-+.-.|. +.+.+.+++|.++|++
T Consensus 144 ~~~l~~~~~------~~~~~v~~~~p~NPtG~-~~s~~~~~~l~~~~~~ 185 (378)
T PRK07682 144 PAQIEAAIT------AKTKAILLCSPNNPTGA-VLNKSELEEIAVIVEK 185 (378)
T ss_pred HHHHHhhcC------cccEEEEEECCCCCcCc-CcCHHHHHHHHHHHHH
Confidence 455655543 24566655543555676 5578899999999974
No 138
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=75.97 E-value=13 Score=30.18 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=8.8
Q ss_pred CCcchHHHHHHHH
Q psy4805 2 MCGSCSNENAYKN 14 (159)
Q Consensus 2 ~sGseA~e~Alkl 14 (159)
.|||+|++.++..
T Consensus 61 ~~~t~al~~~~~~ 73 (363)
T TIGR02326 61 GSGTFAVEAVIGS 73 (363)
T ss_pred CCCHHHHHHHHHh
Confidence 5677777777643
No 139
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=75.76 E-value=8.8 Score=30.99 Aligned_cols=39 Identities=13% Similarity=0.247 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. ++...|++.-++...|++.+ +++|.++|++
T Consensus 128 ~~~l~~~l~------~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~ 166 (353)
T TIGR03235 128 VDELADAIR------PDTLLVSIMHVNNETGSIQP----IREIAEVLEA 166 (353)
T ss_pred HHHHHHhCC------CCCEEEEEEcccCCceeccC----HHHHHHHHHH
Confidence 455555543 24567777877777888765 5777777763
No 140
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=75.50 E-value=5.8 Score=33.63 Aligned_cols=13 Identities=8% Similarity=0.072 Sum_probs=10.7
Q ss_pred CCCcchHHHHHHH
Q psy4805 1 MMCGSCSNENAYK 13 (159)
Q Consensus 1 ~~sGseA~e~Alk 13 (159)
++||+.|+..|+.
T Consensus 85 ~~sG~~Ai~~al~ 97 (431)
T PRK08248 85 VSSGQAAITYSIL 97 (431)
T ss_pred ECCHHHHHHHHHH
Confidence 4789999998885
No 141
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=75.26 E-value=12 Score=30.10 Aligned_cols=40 Identities=10% Similarity=0.248 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.. .++.+|++-..+...|.+.+ +++|.++|++
T Consensus 113 ~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~----~~~i~~~a~~ 152 (356)
T cd06451 113 PEEIAEALEQ-----HDIKAVTLTHNETSTGVLNP----LEGIGALAKK 152 (356)
T ss_pred HHHHHHHHhc-----cCCCEEEEeccCCCcccccC----HHHHHHHHHh
Confidence 4566666643 24556666555555676544 5667777653
No 142
>PRK06108 aspartate aminotransferase; Provisional
Probab=73.09 E-value=19 Score=29.22 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++.++++...+.-.|.+ .+.+.+++|.++|++
T Consensus 148 ~~~l~~~~~------~~~~~i~l~~p~NPtG~~-~~~~~~~~l~~~~~~ 189 (382)
T PRK06108 148 LDRLLAAIT------PRTRALFINSPNNPTGWT-ASRDDLRAILAHCRR 189 (382)
T ss_pred HHHHHHhcC------ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHH
Confidence 455655543 245566665555556765 578999999999974
No 143
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=72.50 E-value=21 Score=29.65 Aligned_cols=21 Identities=14% Similarity=-0.174 Sum_probs=18.0
Q ss_pred CCCcchHHHHHHHHHHHHHHh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQN 21 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~ 21 (159)
+++|||||-.|+..||.+...
T Consensus 109 t~Ggt~anl~al~aAR~~~~~ 129 (373)
T PF00282_consen 109 TSGGTEANLYALLAARERALP 129 (373)
T ss_dssp ESSHHHHHHHHHHHHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHhh
Confidence 368999999999999988643
No 144
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=72.38 E-value=10 Score=32.65 Aligned_cols=21 Identities=14% Similarity=-0.024 Sum_probs=18.3
Q ss_pred CCCcchHHHHHHHHHHHHHHh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQN 21 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~ 21 (159)
+.+|||||..|+..||..+..
T Consensus 125 t~GgTean~lal~aar~~~~~ 145 (460)
T COG0076 125 TSGGTEANLLALLAARERWRK 145 (460)
T ss_pred EcChHHHHHHHHHHHHHHHHH
Confidence 468999999999999999853
No 145
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=71.62 E-value=7.4 Score=33.49 Aligned_cols=47 Identities=23% Similarity=0.157 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|...+ .++|..++++-....+|=.+.|.+++++++++|++
T Consensus 169 l~~le~~I~~~g--~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~ 215 (467)
T TIGR02617 169 LEGLERGIEEVG--PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKK 215 (467)
T ss_pred HHHHHHHHhhcC--CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHH
Confidence 678888887652 36788888876544333356788999999999985
No 146
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=70.87 E-value=17 Score=30.04 Aligned_cols=45 Identities=13% Similarity=0.244 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcc-CCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNK-KGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~-~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++++.+..... ..+++.+|+++-..+..|.+.+ +++|.++|++
T Consensus 141 ~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~ 186 (387)
T PRK09331 141 PEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHE 186 (387)
T ss_pred HHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHH
Confidence 4556666653200 0236778888876666675543 7778887764
No 147
>PRK06225 aspartate aminotransferase; Provisional
Probab=70.33 E-value=20 Score=29.32 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=20.7
Q ss_pred CeEEE-EEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGI-VVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAv-I~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.++ ++.| +.-.|.+ ++.+.+++|.++|++
T Consensus 157 ~~~~v~l~~p-~NptG~~-~~~~~~~~i~~~a~~ 188 (380)
T PRK06225 157 NTRLIYLIDP-LNPLGSS-YTEEEIKEFAEIARD 188 (380)
T ss_pred CceEEEEeCC-CCCCCcC-CCHHHHHHHHHHHHH
Confidence 45454 4567 3345654 467889999999874
No 148
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=68.08 E-value=25 Score=28.50 Aligned_cols=14 Identities=29% Similarity=0.275 Sum_probs=8.8
Q ss_pred CCcchHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNI 15 (159)
Q Consensus 2 ~sGseA~e~AlklA 15 (159)
.|||++++.++.-.
T Consensus 63 ~~gt~~l~~~~~~l 76 (368)
T PRK13479 63 GSGTFSVEAAIGSL 76 (368)
T ss_pred CCcHHHHHHHHHhc
Confidence 46777777766533
No 149
>PRK05939 hypothetical protein; Provisional
Probab=66.71 E-value=11 Score=31.60 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=16.0
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|++|.+....|.+. =+++|.++|+
T Consensus 131 ~tklV~vesp~NptG~v~----dl~~I~~la~ 158 (397)
T PRK05939 131 NTRMVFVETIANPGTQVA----DLAGIGALCR 158 (397)
T ss_pred CCeEEEEECCCCCCCCHH----hHHHHHHHHH
Confidence 455667776655555442 2566666665
No 150
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=65.50 E-value=12 Score=29.02 Aligned_cols=41 Identities=15% Similarity=0.353 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHH-Hh
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQK-IG 157 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~-lc 157 (159)
++.+.+.++. .++ -+|++||++ .+|.....+++++.+++ |+
T Consensus 75 v~~i~~~l~~-----~~~-~vV~DPVm~~~~g~~~~~~~~~~~~~~~Ll 117 (246)
T PF08543_consen 75 VEIIADFLKK-----PKI-PVVLDPVMGDSGGYYYVDPDVVEAMREELL 117 (246)
T ss_dssp HHHHHHHHHH-----TTT-EEEEE---EETTTECTSSHHHHHHHHHHCG
T ss_pred hhhHHHHHhc-----cCC-CEEEecccccCCCCcCCCHHHHHHHHhccC
Confidence 5666666643 244 799999998 67777778999999987 55
No 151
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=64.44 E-value=14 Score=30.77 Aligned_cols=29 Identities=10% Similarity=0.033 Sum_probs=18.6
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|++|....-.|.+.+ +++|.++|++
T Consensus 146 ~tklV~ie~p~NptG~v~d----l~~I~~la~~ 174 (390)
T PRK08133 146 NTKLFFLETPSNPLTELAD----IAALAEIAHA 174 (390)
T ss_pred CCeEEEEECCCCCCCCcCC----HHHHHHHHHH
Confidence 4567888866555565542 5777777764
No 152
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=64.02 E-value=9.3 Score=32.52 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=9.8
Q ss_pred CCcchHHHHHHH
Q psy4805 2 MCGSCSNENAYK 13 (159)
Q Consensus 2 ~sGseA~e~Alk 13 (159)
.||++|+.+|+.
T Consensus 91 sSG~~Ai~~al~ 102 (437)
T PRK05613 91 ASGQAAETAAIL 102 (437)
T ss_pred CCHHHHHHHHHH
Confidence 689999987775
No 153
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=63.78 E-value=41 Score=28.19 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.+|++... ...|.+.+ +++|.++|++
T Consensus 194 ~~~l~~~i~------~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~ 231 (447)
T PRK00451 194 LEALEAAVD------DDTAAVVVQYP-NFFGVIED----LEEIAEIAHA 231 (447)
T ss_pred HHHHHHhcC------CCeEEEEEECC-CCCCeeCC----HHHHHHHHHH
Confidence 456666553 35677777653 55677643 7888888864
No 154
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=63.09 E-value=16 Score=29.89 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++++.+........+...|+++++....|.+.+ +++|.++|++
T Consensus 154 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~ 198 (393)
T TIGR01822 154 MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADK 198 (393)
T ss_pred HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHH
Confidence 45566666543111236788999988888887654 7888888874
No 155
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=62.07 E-value=15 Score=29.51 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=14.6
Q ss_pred eEEEEEccccc-CCCCccCC
Q psy4805 128 VAGIVVEPIQS-EGGDNHGS 146 (159)
Q Consensus 128 vAAvI~EPiqG-~gGv~~pp 146 (159)
-+-++++||+| +||+++++
T Consensus 104 ~~~~l~DPVMGD~gglYV~~ 123 (281)
T COG2240 104 NALYLCDPVMGDPGGLYVAP 123 (281)
T ss_pred CeEEEeCCcccCCCceeecc
Confidence 37899999999 46776654
No 156
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=59.99 E-value=31 Score=28.68 Aligned_cols=28 Identities=11% Similarity=0.088 Sum_probs=16.2
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++.+|++|....--|.+.+ +++|.++|+
T Consensus 137 ~tklV~ie~p~NPtG~v~d----l~~I~~la~ 164 (385)
T PRK08574 137 RTKLVFIETMTNPTLKVID----VPEVAKAAK 164 (385)
T ss_pred CceEEEEECCCCCCCEecC----HHHHHHHHH
Confidence 4566777765554454433 556666665
No 157
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=58.60 E-value=16 Score=30.30 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|+..+.....-......++.|.-+.++|. ++|.++|+.+.++|++
T Consensus 114 ~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt-Vy~l~el~~i~~~~k~ 161 (342)
T COG2008 114 PEDVEAAIRPDDIHHAPTPLAVLENTATEGGT-VYPLDELEAISAVCKE 161 (342)
T ss_pred HHHHHHhhcCCCcccCCCceEEEeeccCCCce-ecCHHHHHHHHHHHHH
Confidence 45555555431101235567777776668886 6789999999999985
No 158
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=58.52 E-value=19 Score=29.87 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.++.. .+++..|++..+....|++.| +++|.++|++
T Consensus 158 ~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~ 199 (406)
T TIGR01814 158 LEDILDTIEKN---GDDIAVILLSGVQYYTGQLFD----MAAITRAAHA 199 (406)
T ss_pred HHHHHHHHHhc---CCCeEEEEEeccccccceecC----HHHHHHHHHH
Confidence 45566666542 357889999999999998876 7778888864
No 159
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=57.90 E-value=29 Score=28.89 Aligned_cols=29 Identities=3% Similarity=-0.081 Sum_probs=17.4
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|++|-...-.|.+.+ +++|.++|++
T Consensus 144 ~tklV~le~p~Np~G~v~d----l~~I~~la~~ 172 (391)
T TIGR01328 144 NTKIVYFETPANPTMKLID----MERVCRDAHS 172 (391)
T ss_pred CCeEEEEECCCCCCCcccC----HHHHHHHHHH
Confidence 4567888865544454433 6677777753
No 160
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=57.46 E-value=25 Score=29.40 Aligned_cols=13 Identities=23% Similarity=0.460 Sum_probs=9.3
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
..||+....|++.
T Consensus 104 D~Vi~~~~~y~~~ 116 (398)
T PRK08249 104 DRVVSIKDTYGGT 116 (398)
T ss_pred CEEEEcCCchHHH
Confidence 4788888887654
No 161
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=57.36 E-value=23 Score=30.14 Aligned_cols=13 Identities=15% Similarity=0.204 Sum_probs=10.5
Q ss_pred CCCcchHHHHHHH
Q psy4805 1 MMCGSCSNENAYK 13 (159)
Q Consensus 1 ~~sGseA~e~Alk 13 (159)
++||+.|+..|+.
T Consensus 90 ~sSG~aAi~~al~ 102 (436)
T PRK07812 90 LASGQAAETFAIL 102 (436)
T ss_pred EccHHHHHHHHHH
Confidence 3689999998883
No 162
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=57.34 E-value=28 Score=28.91 Aligned_cols=13 Identities=15% Similarity=0.166 Sum_probs=9.1
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
.+||.-...|+|.
T Consensus 89 d~Vi~~~~~y~~t 101 (380)
T PRK06176 89 DHVLLGDDVYGGT 101 (380)
T ss_pred CEEEEcCCChhHH
Confidence 5688877777555
No 163
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=57.09 E-value=92 Score=25.05 Aligned_cols=38 Identities=26% Similarity=0.394 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++++++.+.. ..++.+++.|. ...|.+.+ +++|.++|+
T Consensus 143 ~~~l~~~l~~-----~~~~vv~~~~~-~~tG~~~~----~~~i~~l~~ 180 (373)
T TIGR03812 143 VKDVEDLIDD-----NTIGIVGIAGT-TELGQIDD----IEELSKIAL 180 (373)
T ss_pred HHHHHHHHhh-----CcEEEEEECCC-CCCCccCC----HHHHHHHHH
Confidence 5666666653 23455666663 44576643 566677765
No 164
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=57.00 E-value=72 Score=26.23 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.+++.+... ..++.++++. | +.-.|++ .+.+-+++|.++|++
T Consensus 153 ~~~l~~~~~~~---~~~~~~i~l~~P-~NPtG~~-~s~~~~~~l~~~~~~ 197 (391)
T PRK07309 153 PEMLEKAILEQ---GDKLKAVILNYP-ANPTGVT-YSREQIKALADVLKK 197 (391)
T ss_pred HHHHHHHhhcc---CCCeEEEEEECC-CCCCCcC-cCHHHHHHHHHHHHH
Confidence 45666666542 2357777776 5 4455654 466778888888874
No 165
>PRK07503 methionine gamma-lyase; Provisional
Probab=56.28 E-value=23 Score=29.66 Aligned_cols=28 Identities=7% Similarity=-0.011 Sum_probs=16.2
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|++|....-.|.+.+ +++|.++|+
T Consensus 150 ~tklV~le~p~NPtG~~~d----i~~I~~la~ 177 (403)
T PRK07503 150 KTRMVYFETPANPNMRLVD----IAAVAEIAH 177 (403)
T ss_pred cCcEEEEeCCCCCCCeeeC----HHHHHHHHH
Confidence 4556777755544454432 566666665
No 166
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=55.70 E-value=27 Score=29.75 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+.+++.|. ++..+|++|. .|+--..+++ +++|.++|++
T Consensus 137 ~~~l~~~I~------~~Tk~I~~e~-pgnP~~~v~D---i~~I~~iA~~ 175 (432)
T PRK06702 137 ADEIVALAN------DKTKLVYAES-LGNPAMNVLN---FKEFSDAAKE 175 (432)
T ss_pred HHHHHHhCC------cCCeEEEEEc-CCCccccccC---HHHHHHHHHH
Confidence 355666664 2456888886 3543333334 8888888864
No 167
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=54.97 E-value=25 Score=29.21 Aligned_cols=13 Identities=8% Similarity=0.184 Sum_probs=9.0
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
..||....+|.+.
T Consensus 91 D~Vl~~~p~y~~~ 103 (382)
T TIGR02080 91 DLLVAPHDCYGGT 103 (382)
T ss_pred CEEEEcCCCcHHH
Confidence 4677777777653
No 168
>PRK06234 methionine gamma-lyase; Provisional
Probab=53.69 E-value=44 Score=27.85 Aligned_cols=39 Identities=13% Similarity=0.185 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. ++..+|++|....-.|.+.+ +++|.++|++
T Consensus 139 ~e~l~~~i~------~~tklI~iesP~NPtG~v~d----l~~I~~la~~ 177 (400)
T PRK06234 139 LEEVRNALK------ANTKVVYLETPANPTLKVTD----IKAISNIAHE 177 (400)
T ss_pred HHHHHHHhc------cCCeEEEEECCCCCCCCcCC----HHHHHHHHHh
Confidence 445555553 24567888865554565443 6777777753
No 169
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=52.46 E-value=45 Score=26.95 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.+|++.-+....|.+.+ +++|.++|++
T Consensus 129 ~~~l~~~l~------~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~ 167 (373)
T cd06453 129 LEALEKLLT------ERTKLVAVTHVSNVLGTINP----VKEIGEIAHE 167 (373)
T ss_pred HHHHHHHhc------CCceEEEEeCcccccCCcCC----HHHHHHHHHH
Confidence 455665553 25566776655555666654 4677777753
No 170
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=52.16 E-value=28 Score=28.98 Aligned_cols=15 Identities=7% Similarity=0.127 Sum_probs=10.2
Q ss_pred CceEEEEcCCCCccc
Q psy4805 48 NLSILSFKGAFHGRT 62 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T 62 (159)
...||.....|+|..
T Consensus 91 GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 91 GDLLVAPHDCYGGSY 105 (386)
T ss_pred CCEEEEcCCCcHHHH
Confidence 356888888887643
No 171
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=51.80 E-value=78 Score=25.96 Aligned_cols=13 Identities=8% Similarity=0.184 Sum_probs=10.1
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
.+||.....|++.
T Consensus 91 d~Vl~~~~~y~~t 103 (366)
T PRK08247 91 DELIVSSDLYGGT 103 (366)
T ss_pred CEEEEecCCcCcH
Confidence 5788888888874
No 172
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=50.98 E-value=71 Score=27.41 Aligned_cols=43 Identities=12% Similarity=0.090 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++|++.|... .+..+++|+.-|--+..| .++=+.+|.++|++
T Consensus 191 ~e~Le~aIt~~--~~kai~~Vv~Tp~t~~~g----~~ddL~eIa~la~k 233 (444)
T TIGR03531 191 VEDIERAIEEI--GPDNILCVLSTTSCFAPR----SPDDIEEIAKICAN 233 (444)
T ss_pred HHHHHHHHHhc--cCCCEEEEEEcCCcCCCc----chhCHHHHHHHHHH
Confidence 56777787643 125678887666532222 34668899999874
No 173
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=50.87 E-value=46 Score=27.62 Aligned_cols=14 Identities=7% Similarity=0.268 Sum_probs=9.8
Q ss_pred CCcchHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNI 15 (159)
Q Consensus 2 ~sGseA~e~AlklA 15 (159)
.||++|+..++...
T Consensus 83 ~sG~~Ai~~~l~al 96 (388)
T PRK07811 83 SSGMAATDCLLRAV 96 (388)
T ss_pred CCHHHHHHHHHHHH
Confidence 57888888777533
No 174
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=50.26 E-value=73 Score=25.96 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++.+++.+. ++...|++.-.+...|.+.+ +++|.++|+
T Consensus 130 ~~~l~~~i~------~~t~lv~~~~~~n~tG~~~~----~~~I~~la~ 167 (382)
T TIGR03403 130 AEQVREAIT------EKTALVSVMWANNETGMIFP----IKEIGEICK 167 (382)
T ss_pred HHHHHHhcc------cCCeEEEEEcccCCCccccC----HHHHHHHHH
Confidence 345555543 23456667666667777665 456666665
No 175
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=50.11 E-value=31 Score=28.06 Aligned_cols=38 Identities=11% Similarity=0.336 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++++++.+. .++..|++--+....|++.| +++|.++|+
T Consensus 129 ~~~~~~~l~------~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~ 166 (371)
T PF00266_consen 129 LEDLEEALN------PDTRLVSISHVENSTGVRNP----IEEIAKLAH 166 (371)
T ss_dssp HHHHHHHHH------TTESEEEEESBETTTTBBSS----HHHHHHHHH
T ss_pred hhhhhhhhc------cccceEEeecccccccEEee----eceehhhhh
Confidence 455666663 35666666666667777665 556666665
No 176
>PLN02242 methionine gamma-lyase
Probab=48.83 E-value=38 Score=28.54 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.. .+..+|++|-...-.|.+. -+++|.++|++
T Consensus 152 ~e~l~~~i~~-----~~tklV~lesp~NPtG~v~----dl~~I~~la~~ 191 (418)
T PLN02242 152 LEAVKKAVVP-----GKTKVLYFESISNPTLTVA----DIPELARIAHE 191 (418)
T ss_pred HHHHHHhcCc-----CCCEEEEEecCCCCCCccc----CHHHHHHHHHH
Confidence 4555555531 2467888887665555543 36778877764
No 177
>PLN02409 serine--glyoxylate aminotransaminase
Probab=48.77 E-value=66 Score=26.66 Aligned_cols=14 Identities=14% Similarity=0.076 Sum_probs=8.6
Q ss_pred ceEEEEcCCCCccc
Q psy4805 49 LSILSFKGAFHGRT 62 (159)
Q Consensus 49 ~~Ii~~~~sYHG~T 62 (159)
.+||....+|.+..
T Consensus 85 d~Vlv~~~~~~~~~ 98 (401)
T PLN02409 85 DKVVSFRIGQFSLL 98 (401)
T ss_pred CEEEEeCCCchhHH
Confidence 46777776666543
No 178
>PRK08064 cystathionine beta-lyase; Provisional
Probab=48.41 E-value=31 Score=28.71 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=10.1
Q ss_pred ceEEEEcCCCCccc
Q psy4805 49 LSILSFKGAFHGRT 62 (159)
Q Consensus 49 ~~Ii~~~~sYHG~T 62 (159)
.+||.....|++..
T Consensus 93 d~Vlv~~~~y~~~~ 106 (390)
T PRK08064 93 DHVLISEDVYGGTY 106 (390)
T ss_pred CEEEEccCccchHH
Confidence 46888888877654
No 179
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=47.56 E-value=33 Score=29.20 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|... +...+.+|+++ |..-.||. +.+.+.+++|+++|++
T Consensus 138 ~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~-~~s~~~l~~i~eia~~ 184 (431)
T cd00617 138 VAKLEKLIDEV--GAENIPYIVLTITNNTAGGQ-PVSMANLREVRELAHK 184 (431)
T ss_pred HHHHHHHhCcc--cCCCccEEEEECCcCCCCCc-cCCHHHHHHHHHHHHH
Confidence 67788887643 12457888888 33333564 6688999999999985
No 180
>PRK13260 2,3-diketo-L-gulonate reductase; Provisional
Probab=45.09 E-value=28 Score=28.65 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=24.2
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccc
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRT 62 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T 62 (159)
+..|+|.|++.||++ | .-+|+.++|+|=..
T Consensus 90 ~~~am~~aiekAr~~------G-----------------------i~~v~vrns~H~G~ 119 (332)
T PRK13260 90 AKKMMDRAIELARDH------G-----------------------IGLVALRNANHWMR 119 (332)
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEcCCCchhh
Confidence 567999999999987 3 46899999999443
No 181
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=44.85 E-value=1.5e+02 Score=23.26 Aligned_cols=39 Identities=5% Similarity=0.106 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhccCCCCeE-EEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVA-GIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vA-AvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++++.+... .++. .+|..|. -.|++.+ +++|.++|++
T Consensus 142 ~~~l~~~l~~~----~~~k~v~l~~p~--~~G~~~d----l~~I~~~~~~ 181 (294)
T cd00615 142 PETFKKALIEH----PDAKAAVITNPT--YYGICYN----LRKIVEEAHH 181 (294)
T ss_pred HHHHHHHHHhC----CCceEEEEECCC--CCCEecC----HHHHHHHHHh
Confidence 56677776542 2444 4444563 2466553 6788888864
No 182
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=44.77 E-value=50 Score=27.67 Aligned_cols=28 Identities=7% Similarity=0.146 Sum_probs=15.9
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|++|-...-.|.+. + +++|.++|+
T Consensus 155 ~tklV~~esp~Nptg~v~-d---l~~I~~la~ 182 (403)
T PRK07810 155 PTQAVFFETPSNPMQSLV-D---IAAVSELAH 182 (403)
T ss_pred CceEEEEECCCCCCCeec-C---HHHHHHHHH
Confidence 456777776554445433 2 566666665
No 183
>PRK15025 ureidoglycolate dehydrogenase; Provisional
Probab=43.49 E-value=30 Score=28.67 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=26.1
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.||+.||++ | .-+|+.++|.|-..++
T Consensus 90 ~~~Am~~aiekA~~~------G-----------------------i~~v~vrnS~H~G~~g 121 (349)
T PRK15025 90 AKMGMEHAIETAKQN------G-----------------------VAVVGISRMGHSGAIS 121 (349)
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEeCCCccccHH
Confidence 567999999999987 3 4689999999976644
No 184
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=42.97 E-value=51 Score=27.56 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=9.2
Q ss_pred CCCcchHHHHHHH
Q psy4805 1 MMCGSCSNENAYK 13 (159)
Q Consensus 1 ~~sGseA~e~Alk 13 (159)
++||++|+..++.
T Consensus 74 t~gg~~Ai~~~l~ 86 (388)
T PRK08861 74 TNCGTSALNLWVS 86 (388)
T ss_pred ECCHHHHHHHHHH
Confidence 3677888877774
No 185
>PF15513 DUF4651: Domain of unknown function (DUF4651)
Probab=41.95 E-value=56 Score=20.15 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEEcccccC-----CCCccC
Q psy4805 109 KCLAEVEDLITKYNKKGTPVAGIVVEPIQSE-----GGDNHG 145 (159)
Q Consensus 109 ~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~-----gGv~~p 145 (159)
...+.|++.|... ++|+.+-+.|...+ ||+++-
T Consensus 6 ~i~~~iR~~fs~l----G~I~vLYvn~~eS~~~~~~GGvV~e 43 (62)
T PF15513_consen 6 EITAEIRQFFSQL----GEIAVLYVNPYESDEDRLTGGVVME 43 (62)
T ss_pred HHHHHHHHHHHhc----CcEEEEEEcccccCCCeEeccEEEe
Confidence 3467788888875 69999999987654 777653
No 186
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=40.80 E-value=1.9e+02 Score=24.85 Aligned_cols=18 Identities=11% Similarity=0.063 Sum_probs=11.3
Q ss_pred CCcchHHHHHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNIFIWY 19 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~ 19 (159)
.+||.+...++-++|.+.
T Consensus 136 ~~GA~a~~~~l~~~r~~~ 153 (481)
T PRK04366 136 AAGAHGELTGLLMIRAYH 153 (481)
T ss_pred CcHHHHHHHHHHHHHHHh
Confidence 356677666666666653
No 187
>PLN00175 aminotransferase family protein; Provisional
Probab=40.39 E-value=1.2e+02 Score=25.18 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.+. .++.++++..-+.-.|.+ .+++.+++|.++|++
T Consensus 177 ~~~l~~~~~------~~~k~i~i~~p~NPtG~~-~s~~~l~~l~~~a~~ 218 (413)
T PLN00175 177 EDELKAAFT------SKTRAILINTPHNPTGKM-FTREELELIASLCKE 218 (413)
T ss_pred HHHHHHhcC------cCceEEEecCCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 455665553 245667776555656764 578999999999874
No 188
>KOG0259|consensus
Probab=40.23 E-value=53 Score=27.92 Aligned_cols=42 Identities=29% Similarity=0.356 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|.++++ +.+|-||+-|-.-.|++ ....-|++|.++|+|
T Consensus 189 L~~veal~DE-----NT~AivviNP~NPcGnV--ys~~HL~kiae~A~k 230 (447)
T KOG0259|consen 189 LDGVEALADE-----NTVAIVVINPNNPCGNV--YSEDHLKKIAETAKK 230 (447)
T ss_pred hHHHHHhhcc-----CeeEEEEeCCCCCCccc--ccHHHHHHHHHHHHH
Confidence 7888888875 48899999997777764 688999999999875
No 189
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=39.44 E-value=1.8e+02 Score=24.40 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++++.. ...+.+|.-|- .-.|. +.+.+-+++|.++|++
T Consensus 180 ~~~l~~~~~~-----~~~~i~i~~P~-NPtG~-v~~~~~l~~i~~~a~~ 221 (430)
T PLN00145 180 LEGVEALADE-----NTVAMVIINPN-NPCGS-VYSYEHLAKIAETARK 221 (430)
T ss_pred HHHHHHHhCc-----CceEEEEeCCC-CCCCC-CCCHHHHHHHHHHHHH
Confidence 4566665542 35567777773 33464 5678888999998864
No 190
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=38.85 E-value=1.2e+02 Score=25.57 Aligned_cols=17 Identities=24% Similarity=0.020 Sum_probs=11.5
Q ss_pred CCcchHHHHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNIFIW 18 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~ 18 (159)
.+|+|++-.|||=+...
T Consensus 68 SG~TEsnNlaI~g~~~a 84 (386)
T COG1104 68 SGATESNNLAIKGAALA 84 (386)
T ss_pred cCCcHHHHHHHHhhHHh
Confidence 56778888888755433
No 191
>KOG2040|consensus
Probab=38.31 E-value=1.2e+02 Score=27.88 Aligned_cols=48 Identities=15% Similarity=0.199 Sum_probs=37.2
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHS 71 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~ 71 (159)
|||+..--+.|+..|.|...+ |+ | .+.|--..-|=||....+..+.|.
T Consensus 605 NsGA~GEYaGL~~IRaY~~~k--ge------------------~--hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 605 NSGAQGEYAGLRVIRAYLESK--GE------------------G--HRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred CCCcccchhhHHHHHHHHHhc--cC------------------C--cceeEEEeecccCCChhhHHhcCC
Confidence 788888889999999997665 54 3 456666788999998877776664
No 192
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=38.15 E-value=70 Score=26.68 Aligned_cols=12 Identities=17% Similarity=0.091 Sum_probs=7.8
Q ss_pred CCcchHHHHHHH
Q psy4805 2 MCGSCSNENAYK 13 (159)
Q Consensus 2 ~sGseA~e~Alk 13 (159)
+||+.|+..++.
T Consensus 87 ~sG~~Ai~~~l~ 98 (398)
T PRK07504 87 ASGMAAVTAAIL 98 (398)
T ss_pred cCHHHHHHHHHH
Confidence 577777766553
No 193
>PLN00105 malate/L-lactate dehydrogenase; Provisional
Probab=38.13 E-value=42 Score=27.60 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcC-CCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKG-AFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~-sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++ |.|=..++
T Consensus 79 ~~~am~~aiekAr~~------G-----------------------i~~v~vrn~S~H~G~~g 111 (330)
T PLN00105 79 LHHAMDMAIDKAKTH------G-----------------------VGIVGTCNTSTSTGALG 111 (330)
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEeCCcCCccchH
Confidence 567999999999987 3 46889999 88866544
No 194
>PF09268 Clathrin-link: Clathrin, heavy-chain linker; InterPro: IPR015348 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. Clathrin is a trimer composed of three heavy chains and three light chains, each monomer projecting outwards like a leg; this three-legged structure is known as a triskelion [, ]. The heavy chains form the legs, their N-terminal beta-propeller regions extending outwards, while their C-terminal alpha-alpha-superhelical regions form the central hub of the triskelion. Peptide motifs can bind between the beta-propeller blades. The light chains appear to have a regulatory role, and may help orient the assembly and disassembly of clathrin coats as they interact with hsc70 uncoating ATPase []. Clathrin triskelia self-polymerise into a curved lattice by twisting individual legs together. The clathrin lattice forms around a vesicle as it buds from the TGN, plasma membrane or endosomes, acting to stabilise the vesicle and facilitate the budding process []. The multiple blades created when the triskelia polymerise are involved in multiple protein interactions, enabling the recruitment of different cargo adaptors and membrane attachment proteins []. This entry represents the core motif for the alpha-helical zigzag linker region connecting the conserved N-terminal beta-propeller region to the C-terminal alpha-alpha-superhelical region in clathrin heavy chains []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030130 clathrin coat of trans-Golgi network vesicle, 0030132 clathrin coat of coated pit; PDB: 1C9I_A 1BPO_B 1C9L_A 1UTC_B 3GD1_I 3GC3_B 2XZG_A 2XZH_A.
Probab=38.11 E-value=32 Score=17.06 Aligned_cols=9 Identities=11% Similarity=-0.097 Sum_probs=7.4
Q ss_pred HHHHHHHHH
Q psy4805 8 NENAYKNIF 16 (159)
Q Consensus 8 ~e~AlklA~ 16 (159)
.|.|+|||.
T Consensus 15 ~~LAl~lA~ 23 (24)
T PF09268_consen 15 PDLALRLAS 23 (24)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 588999985
No 195
>PRK05764 aspartate aminotransferase; Provisional
Probab=37.27 E-value=1.7e+02 Score=23.86 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+. +++.++++..-+.-.|.+ .|.+-+++|.++|++
T Consensus 154 ~~~l~~~l~------~~~~~v~~~~p~NPtG~~-~~~~~~~~l~~~a~~ 195 (393)
T PRK05764 154 VEQLEAAIT------PKTKALILNSPSNPTGAV-YSPEELEAIADVAVE 195 (393)
T ss_pred HHHHHHhhC------ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHH
Confidence 345555543 134444443324445654 566788899888863
No 196
>PRK10098 putative dehydrogenase; Provisional
Probab=37.17 E-value=44 Score=27.74 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|++.||+.||++ | .-+|+.++|.|=..++
T Consensus 94 ~~~Am~~aie~Ar~~------G-----------------------i~~v~vrnS~H~G~~g 125 (350)
T PRK10098 94 AHEAMALGIERARQH------G-----------------------ICAVALRNSHHIGRIG 125 (350)
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEecCCCccchH
Confidence 567999999999987 3 4688999999965543
No 197
>PRK02948 cysteine desulfurase; Provisional
Probab=35.94 E-value=1.2e+02 Score=24.64 Aligned_cols=27 Identities=15% Similarity=0.097 Sum_probs=15.9
Q ss_pred eEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 128 VAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 128 vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
...|+++-.....|.+.+ +++|.++|+
T Consensus 139 ~~lv~~~~~~n~tG~~~~----~~~I~~l~~ 165 (381)
T PRK02948 139 TVLASIQHANSEIGTIQP----IAEIGALLK 165 (381)
T ss_pred CEEEEEECCcCCcEeehh----HHHHHHHHH
Confidence 445666666666676654 345666654
No 198
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=34.89 E-value=1.2e+02 Score=25.06 Aligned_cols=13 Identities=15% Similarity=0.115 Sum_probs=10.6
Q ss_pred CCCcchHHHHHHH
Q psy4805 1 MMCGSCSNENAYK 13 (159)
Q Consensus 1 ~~sGseA~e~Alk 13 (159)
++||.+|+.+++.
T Consensus 75 ~~sG~aAi~~~l~ 87 (364)
T PRK07269 75 TSSGMSAIVLAFS 87 (364)
T ss_pred eCCHHHHHHHHHH
Confidence 4789999998884
No 199
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=34.83 E-value=57 Score=28.12 Aligned_cols=46 Identities=15% Similarity=0.273 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|.... ...++.+.+|= +.-.|| .+.|...+++++++|++
T Consensus 156 ~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG-~pvs~~~l~~I~elA~~ 202 (450)
T TIGR02618 156 LKKLQKLIDEVG--ADKIPYICLAVTVNLAGG-QPVSMANMREVRELCEA 202 (450)
T ss_pred HHHHHHHhcccc--CcccCceEEEEecccCCC-eeCCHHHHHHHHHHHHH
Confidence 677888876431 23555666664 444456 46678999999999985
No 200
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=34.65 E-value=55 Score=28.27 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|.... ..+++.+.+| ++.-.|| .+.|...+++++++|++
T Consensus 163 ~d~Le~~I~~~~--~~~~~lV~a~itvn~~GG-qpvs~~~m~~I~elA~~ 209 (460)
T PRK13237 163 LDKLQALIDEVG--AENIAYICLAVTVNLAGG-QPVSMANMRAVRELCDK 209 (460)
T ss_pred HHHHHHHhcccc--CCccCceEEEEecccCCC-eeCCHHhHHHHHHHHHH
Confidence 677888886532 2355544555 3444456 56678999999999985
No 201
>PRK12414 putative aminotransferase; Provisional
Probab=34.39 E-value=1.8e+02 Score=23.84 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=21.1
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|++..-+.-.|.+. +++-+++|.++|++
T Consensus 162 ~~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~ 193 (384)
T PRK12414 162 RTRMIIVNTPHNPSATVF-SAADLARLAQLTRN 193 (384)
T ss_pred ccEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHH
Confidence 455666654455567654 57788888888864
No 202
>PRK06767 methionine gamma-lyase; Provisional
Probab=34.36 E-value=87 Score=25.91 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=15.9
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+...|++|-...-.|.+.+ +++|.++|+
T Consensus 146 ~tklV~lesp~NptG~v~d----l~~I~~la~ 173 (386)
T PRK06767 146 NTKLIFVETPINPTMKLID----LKQVIRVAK 173 (386)
T ss_pred CceEEEEeCCCCCCceecC----HHHHHHHHH
Confidence 3456777755544554443 466666665
No 203
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=34.21 E-value=93 Score=25.59 Aligned_cols=14 Identities=0% Similarity=-0.057 Sum_probs=10.2
Q ss_pred CCCcchHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKN 14 (159)
Q Consensus 1 ~~sGseA~e~Alkl 14 (159)
++||++|+.+|++.
T Consensus 54 ~~sgt~al~lal~a 67 (379)
T PRK11658 54 VSSATAGMHITLMA 67 (379)
T ss_pred ECCHHHHHHHHHHH
Confidence 36788888887753
No 204
>TIGR03175 AllD ureidoglycolate dehydrogenase. This enzyme converts ureidoglycolate to oxalureate in the non-urea-forming catabolism of allantoin (GenProp0687). The pathway has been characterized in E. coli and is observed in the genomes of Entercoccus faecalis and Bacillus licheniformis.
Probab=33.73 E-value=60 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=26.1
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.||+.||++ | .-+++..+|.|-..++
T Consensus 90 ~~~Am~~aiekAr~~------G-----------------------i~~v~v~ns~H~G~~g 121 (349)
T TIGR03175 90 AKMAMEHAIEIAKKS------G-----------------------VAVVGISRMSHSGALS 121 (349)
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEecCCCccccHH
Confidence 567999999999987 3 4689999999976644
No 205
>PRK09082 methionine aminotransferase; Validated
Probab=33.24 E-value=1.9e+02 Score=23.62 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++-+|++...+.--|.+ .+++-+++|.++|++
T Consensus 153 ~~~l~~~~~------~~~~~v~l~~p~NPtG~~-~~~~~~~~i~~~a~~ 194 (386)
T PRK09082 153 WQRFAAAIS------PRTRLIILNTPHNPSGTV-WSAADMRALWQLIAG 194 (386)
T ss_pred HHHHHHhcC------ccceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 455555553 245566665445555654 467888888888874
No 206
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=32.76 E-value=94 Score=26.05 Aligned_cols=13 Identities=15% Similarity=0.271 Sum_probs=9.4
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
..||.....|++.
T Consensus 100 D~Vvv~~p~Y~~t 112 (405)
T PRK08776 100 DTLVVPHDAYGGS 112 (405)
T ss_pred CEEEEccCCchHH
Confidence 4688888888763
No 207
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=31.91 E-value=99 Score=25.56 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=9.2
Q ss_pred CceEEEEcCCCCcc
Q psy4805 48 NLSILSFKGAFHGR 61 (159)
Q Consensus 48 r~~Ii~~~~sYHG~ 61 (159)
...||....+|.+.
T Consensus 71 Gd~Viv~~~t~~~~ 84 (376)
T TIGR02379 71 GDEVIMPSYTFVST 84 (376)
T ss_pred cCEEEECCCCcHHH
Confidence 35677777777654
No 208
>PRK05967 cystathionine beta-lyase; Provisional
Probab=31.39 E-value=96 Score=26.09 Aligned_cols=15 Identities=7% Similarity=-0.006 Sum_probs=11.4
Q ss_pred CceEEEEcCCCCccc
Q psy4805 48 NLSILSFKGAFHGRT 62 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T 62 (159)
..+||.....|.+..
T Consensus 103 GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 103 GDHALIVDSVYYPTR 117 (395)
T ss_pred CCEEEEccCCcHHHH
Confidence 357888888888764
No 209
>PF11534 HTHP: Hexameric tyrosine-coordinated heme protein (HTHP); InterPro: IPR021111 HTHP is from the marine bacterium Silicibacter pomeroyi and has peroxidase and catalase activity. HTHP consists of six monomers which each binds a solvent accessible heme group and is stabilised by the interaction of three neighbouring monomers []. The heme iron is penta-coordinated with a tyrosine residue as proximal ligand [].; PDB: 2OYY_B.
Probab=31.32 E-value=45 Score=21.26 Aligned_cols=17 Identities=12% Similarity=-0.248 Sum_probs=13.5
Q ss_pred CcchHHHHHHHHHHHHH
Q psy4805 3 CGSCSNENAYKNIFIWY 19 (159)
Q Consensus 3 sGseA~e~AlklA~~~~ 19 (159)
+=-|.-++|+||||..-
T Consensus 13 TPeeG~~LAvk~aR~~v 29 (75)
T PF11534_consen 13 TPEEGFQLAVKMARMAV 29 (75)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 33477899999999874
No 210
>PRK08114 cystathionine beta-lyase; Provisional
Probab=31.13 E-value=79 Score=26.61 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=9.7
Q ss_pred CCcchHHHHHHH
Q psy4805 2 MCGSCSNENAYK 13 (159)
Q Consensus 2 ~sGseA~e~Alk 13 (159)
.||..|+..++.
T Consensus 84 ~SGmaAi~~~~~ 95 (395)
T PRK08114 84 PCGAAAVANAIL 95 (395)
T ss_pred hHHHHHHHHHHH
Confidence 578899988775
No 211
>PRK07671 cystathionine beta-lyase; Provisional
Probab=30.98 E-value=1.2e+02 Score=25.02 Aligned_cols=13 Identities=8% Similarity=0.212 Sum_probs=9.0
Q ss_pred ceEEEEcCCCCcc
Q psy4805 49 LSILSFKGAFHGR 61 (159)
Q Consensus 49 ~~Ii~~~~sYHG~ 61 (159)
.+||.....|.+.
T Consensus 89 d~Viv~~~~y~~~ 101 (377)
T PRK07671 89 DHVILTDDVYGGT 101 (377)
T ss_pred CEEEECCCccchH
Confidence 4688777777554
No 212
>COG2055 Malate/L-lactate dehydrogenases [Energy production and conversion]
Probab=30.17 E-value=65 Score=26.82 Aligned_cols=30 Identities=20% Similarity=0.206 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 6 CSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 6 eA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
.|++.|+++||+. | --+++..+++|=..++
T Consensus 95 ~am~~aie~Ak~~------G-----------------------ia~vav~ns~H~g~~g 124 (349)
T COG2055 95 KAMELAIEKAKQH------G-----------------------IAAVAVRNSNHFGALG 124 (349)
T ss_pred HHHHHHHHHHHHh------C-----------------------eeEEEEecCCccchHH
Confidence 5788889988876 3 4689999999966544
No 213
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=29.27 E-value=1.7e+02 Score=23.91 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.+. +..++.+|++ +. -.|... + +++|.++|++
T Consensus 107 ~~~l~~~i~~~--~~~~t~~v~~--~~-~~G~~~-~---~~~i~~l~~~ 146 (380)
T TIGR03588 107 EDALEKKLAAA--KGKLPKAIVP--VD-FAGKSV-D---MQAIAALAKK 146 (380)
T ss_pred HHHHHHHhhcc--cCCCceEEEE--eC-CCCccC-C---HHHHHHHHHH
Confidence 45666666532 0124445552 11 234332 2 6788888864
No 214
>KOG1364|consensus
Probab=28.57 E-value=52 Score=27.34 Aligned_cols=27 Identities=22% Similarity=0.470 Sum_probs=22.8
Q ss_pred EEEcccccC-----CCCccCCHHHHHHHHHHhc
Q psy4805 131 IVVEPIQSE-----GGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 131 vI~EPiqG~-----gGv~~pp~~fl~~lr~lc~ 158 (159)
+|++|++|. .|++. |.+|+..+.+..+
T Consensus 159 ~iiDp~Tge~v~~ws~vi~-~~~fl~~l~~Fi~ 190 (356)
T KOG1364|consen 159 AIIDPITGERVKRWSGVIE-PEQFLSDLNEFID 190 (356)
T ss_pred EEECCchhhhhhhhccccC-HHHHHHHHHHHHh
Confidence 789999996 58877 9999999998753
No 215
>PF02615 Ldh_2: Malate/L-lactate dehydrogenase; InterPro: IPR003767 The malate dehydrogenase (MDH) of some extremophilies is more similar to the L-lactate dehydrogenases (L-LDH) 1.1.1.27 from EC from various sources than to other MDHs []. This family consists of bacterial and archaeal malate/L-lactate dehydrogenases. The archaebacterial malate dehydrogenase 1.1.1.37 from EC, 1.1.1.82 from EC deviates from the eubacterial and eukaryotic enzymes having a low selectivity for the coenzyme (NAD(H) or NADP(H)) and catalyzing the reduction of oxalacetate to malate more efficiently than the reverse reaction [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1VBI_A 2G8Y_B 2X06_H 1Z2I_B 1X0A_A 1V9N_A 1XRH_G 3I0P_A 2CWH_B 2CWF_B ....
Probab=28.38 E-value=46 Score=27.42 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=23.4
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+++.++|.|=..++
T Consensus 90 ~~~A~~~aiekA~~~------G-----------------------ia~v~vrns~H~G~~g 121 (335)
T PF02615_consen 90 AKFAMELAIEKAKEH------G-----------------------IAAVAVRNSNHFGALG 121 (335)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEEE--S-TH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEecCCCCCccH
Confidence 567899999999987 3 4689999999866544
No 216
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=28.25 E-value=2.1e+02 Score=23.31 Aligned_cols=92 Identities=17% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+.|..+||+.. |-+ + ...||.=..+|.......+.+...+
T Consensus 46 ~~sgt~Al~~al~~l---------~~~----------------~---gdeVi~p~~t~~~~~~ai~~~G~~p-------- 89 (363)
T PF01041_consen 46 VSSGTSALHLALRAL---------GLG----------------P---GDEVIVPAYTFPATASAILWAGAEP-------- 89 (363)
T ss_dssp ESSHHHHHHHHHHHT---------TGG----------------T---TSEEEEESSS-THHHHHHHHTT-EE--------
T ss_pred eCChhHHHHHHHHhc---------CCC----------------c---CceEecCCCcchHHHHHHHHhccEE--------
Confidence 479999999999863 210 2 4688888888877655444433221
Q ss_pred CCCCCcccC-CCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASF-PKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~-p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++. |. .+ . -| .+.+++.|.. +..|||+=-+.|. +. =+.+++++|++
T Consensus 90 ----v~~Di~~~---~~--~---id------~~~~~~~i~~------~t~ai~~~h~~G~----~~---d~~~i~~~~~~ 138 (363)
T PF01041_consen 90 ----VFVDIDPE---TL--N---ID------PEALEKAITP------KTKAILVVHLFGN----PA---DMDAIRAIARK 138 (363)
T ss_dssp ----EEE-BETT---TS--S---B-------HHHHHHHHHT------TEEEEEEE-GGGB----------HHHHHHHHHH
T ss_pred ----EEEeccCC---cC--C---cC------HHHHHHHhcc------CccEEEEecCCCC----cc---cHHHHHHHHHH
Confidence 11111 11 01 0 12 5667777753 4577777666653 22 47778887763
No 217
>PF08259 Periviscerokin: Periviscerokinin family; InterPro: IPR013231 Perviscerokinin neuropeptides are found in the abdominal perisympathetic organs of insects. They mediate visceral muscle contractile activity (myotropic activity). CAPA, which are in the periviscerokinin and pyrokinin peptide families, has potential medical importance. This is due to its myotropic effects on, for example, heart muscles and due to its occurrence in the Ixodoidea (ticks), which are important vectors in the transmission of many animal diseases []. These peptides also have a strong diuretic or anti-diuretic effect, suggesting they have significant medical implications [].
Probab=26.81 E-value=30 Score=13.81 Aligned_cols=9 Identities=11% Similarity=-0.186 Sum_probs=5.8
Q ss_pred cCCCCccCC
Q psy4805 138 SEGGDNHGS 146 (159)
Q Consensus 138 G~gGv~~pp 146 (159)
|+.|+|+.|
T Consensus 1 gssGlI~fp 9 (11)
T PF08259_consen 1 GSSGLIPFP 9 (11)
T ss_pred CCccccccC
Confidence 456777665
No 218
>PLN02978 pyridoxal kinase
Probab=25.08 E-value=1.5e+02 Score=23.80 Aligned_cols=29 Identities=10% Similarity=0.149 Sum_probs=20.2
Q ss_pred EEEEEcccccCCCCccCCHHHHHHHHH-Hh
Q psy4805 129 AGIVVEPIQSEGGDNHGSNYFFQQLQK-IG 157 (159)
Q Consensus 129 AAvI~EPiqG~gGv~~pp~~fl~~lr~-lc 157 (159)
.-+|++|+++..|-...++++.+.+++ ++
T Consensus 118 ~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll 147 (308)
T PLN02978 118 LTYVCDPVLGDEGKLYVPPELVPVYREKVV 147 (308)
T ss_pred CeEEECCcccCCCCccCChhHHHHHHHHHH
Confidence 457899999976655566777766653 54
No 219
>PF07505 Gp37_Gp68: Phage protein Gp37/Gp68; InterPro: IPR011101 This entry is represented by Burkholderia phage phiE125, Gp37. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=24.64 E-value=2.4e+02 Score=22.43 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=26.1
Q ss_pred CCCeEEEEEcccccCC---------------------CCccCCHHHHHHHHHHhcC
Q psy4805 125 GTPVAGIVVEPIQSEG---------------------GDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 125 ~~~vAAvI~EPiqG~g---------------------Gv~~pp~~fl~~lr~lc~~ 159 (159)
+-.+=-|.+||++|.- +-.+..++|.+.||+-|++
T Consensus 164 pa~~rflS~EPLLg~i~l~~~~~~~IdWVIvGGESG~~ARp~~~~Wvr~irdqC~~ 219 (261)
T PF07505_consen 164 PAKVRFLSCEPLLGPIDLSKLDLEGIDWVIVGGESGPGARPMHPDWVRSIRDQCAA 219 (261)
T ss_pred CccEEEEEeccccCCcCcccccCCCCCEEEECCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 3456678899888752 3457789999999999974
No 220
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=24.63 E-value=3.2e+02 Score=22.00 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=15.2
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++.+|++.-.....|.+. -+++|.++|+
T Consensus 139 ~~~lv~l~~p~n~tG~~~----~~~~i~~~~~ 166 (361)
T cd06452 139 PPALALLTHVDGNYGNLH----DAKKIAKVCH 166 (361)
T ss_pred CceEEEEECCCCCCeeec----cHHHHHHHHH
Confidence 456666654444445432 2566666665
No 221
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=24.39 E-value=1.1e+02 Score=23.96 Aligned_cols=41 Identities=20% Similarity=0.126 Sum_probs=32.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS 67 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s 67 (159)
+.|+-..|-.+.|++..... | =++||+..+-+||+--...+
T Consensus 13 DDGp~s~eesl~ml~~A~~q-----------------------G--vt~iVaTsHh~~g~y~n~~~ 53 (254)
T COG4464 13 DDGPKSLEESLAMLREAVRQ-----------------------G--VTKIVATSHHLHGRYENPIE 53 (254)
T ss_pred CCCCCcHHHHHHHHHHHHHc-----------------------C--ceEEeecccccCCccCChHH
Confidence 56888899999999988521 4 67999999999999754444
No 222
>PF01341 Glyco_hydro_6: Glycosyl hydrolases family 6; InterPro: IPR016288 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The 1,4-beta cellobiohydrolase family plays a central role in the recycling of plant biomass. The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: Endoglucanases, which cut internal beta-1,4-glucosidic bonds; Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; and Beta-1,4-glucosidases, which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030245 cellulose catabolic process; PDB: 2BOF_X 2BOG_X 1TML_A 3RPT_A 2BOD_X 2BOE_X 1DYS_B 3VOI_A 3VOG_A 3VOJ_A ....
Probab=23.64 E-value=1.3e+02 Score=24.42 Aligned_cols=23 Identities=30% Similarity=0.530 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhccCCCCeEEEEEcc
Q psy4805 110 CLAEVEDLITKYNKKGTPVAGIVVEP 135 (159)
Q Consensus 110 ~~~~le~~i~~~~~~~~~vAAvI~EP 135 (159)
+++.|...|..+ ++.-+.+|+||
T Consensus 94 wId~ia~~i~~~---g~~~~vvIlEP 116 (298)
T PF01341_consen 94 WIDPIAAGIKKY---GDRRAVVILEP 116 (298)
T ss_dssp HHHHHHHHHHHT---TTSEEEEEE-T
T ss_pred HHHHHHHHHHhc---CCCceEEEECc
Confidence 677788888665 57889999999
No 223
>PRK09028 cystathionine beta-lyase; Provisional
Probab=23.14 E-value=2.3e+02 Score=23.77 Aligned_cols=14 Identities=7% Similarity=0.150 Sum_probs=9.7
Q ss_pred ceEEEEcCCCCccc
Q psy4805 49 LSILSFKGAFHGRT 62 (159)
Q Consensus 49 ~~Ii~~~~sYHG~T 62 (159)
.+||.....|.+..
T Consensus 101 D~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 101 DHLLMVDSCYEPTR 114 (394)
T ss_pred CEEEEECCCcHHHH
Confidence 56888887775554
No 224
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=22.25 E-value=4e+02 Score=22.53 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=25.0
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS 67 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s 67 (159)
.||+-|+|+|+--.- . | ..+|+.+.+|.=|.-+.=+.
T Consensus 63 gsGt~amEAav~sl~--------~------------------p---gdkVLv~~nG~FG~R~~~ia 99 (383)
T COG0075 63 GSGTLAMEAAVASLV--------E------------------P---GDKVLVVVNGKFGERFAEIA 99 (383)
T ss_pred CCcHHHHHHHHHhcc--------C------------------C---CCeEEEEeCChHHHHHHHHH
Confidence 589999999985221 0 2 46888888888777655443
No 225
>PF09454 Vps23_core: Vps23 core domain; InterPro: IPR017916 The Endosomal Sorting Complex Required for Transport (ESCRT) complexes form the machinery driving protein sorting from endosomes to lysosomes. ESCRT complexes are central to receptor down-regulation, lysosome biogenesis, and budding of HIV. Yeast ESCRT-I consists of three protein subunits, VPS23, VPS28, and VPS37. In humans, ESCRT-I comprises TSG101, VPS28, and one of four potential human VPS37 homologues. The main role of ESCRT-I is to recognise ubiquitinated cargo via the UEV domain of the VPS23/TSG101 subunit. The assembly of the ESCRT-I complex is directed by the C-terminal steadiness box (SB) of VPS23, the N-terminal half of VPS28, and the C-terminal half of VPS37. The structure is primarily composed of three long, parallel helical hairpins, each corresponding to a different subunit. The additional domains and motifs extending beyond the core serve as gripping tools for ESCRT-I critical functions [, ]. This entry represents the Steadiness box domain.; PDB: 2CAZ_A 2F66_D 2F6M_A 2P22_A.
Probab=21.42 E-value=44 Score=20.65 Aligned_cols=15 Identities=13% Similarity=0.492 Sum_probs=12.6
Q ss_pred CCHHHHHHHHHHhcC
Q psy4805 145 GSNYFFQQLQKIGKK 159 (159)
Q Consensus 145 pp~~fl~~lr~lc~~ 159 (159)
+...|++.+|.|+||
T Consensus 41 ~~d~~lK~vR~LaRe 55 (65)
T PF09454_consen 41 DLDTFLKQVRSLARE 55 (65)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 568999999999985
No 226
>cd07936 SCAN SCAN oligomerization domain. The SCAN domain (named after SRE-ZBP, CTfin51, AW-1 and Number 18 cDNA) is found in several vertebrate proteins that contain C2H2 zinc finger motifs, many of which may be transcription factors playing roles in cell survival and differentiation. This protein-interaction domain is able to mediate homo- and hetero-oligomerization of SCAN-containing proteins. Some SCAN-containing proteins, including those of lower vertebrates, do not contain zinc finger motifs. It has been noted that the SCAN domain resembles a domain-swapped version of the C-terminal domain of the HIV capsid protein. This domain model features elements common to the three general groups of SCAN domains (SCAN-A1, SCAN-A2, and SCAN-B). The SCAND1 protein is truncated at the C-terminus with respect to this model, the SCAND2 protein appears to have a truncated central helix.
Probab=21.09 E-value=59 Score=21.13 Aligned_cols=16 Identities=19% Similarity=0.418 Sum_probs=13.3
Q ss_pred cCCHHHHHHHHHHhcC
Q psy4805 144 HGSNYFFQQLQKIGKK 159 (159)
Q Consensus 144 ~pp~~fl~~lr~lc~~ 159 (159)
..|.++|..|++||++
T Consensus 17 ~~p~eal~~L~eLc~~ 32 (85)
T cd07936 17 SGPREALQRLRELCRQ 32 (85)
T ss_pred CChHHHHHHHHHHHHH
Confidence 4588999999999974
No 227
>PTZ00344 pyridoxal kinase; Provisional
Probab=20.83 E-value=2.3e+02 Score=22.40 Aligned_cols=29 Identities=7% Similarity=0.134 Sum_probs=20.7
Q ss_pred EEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 129 AGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 129 AAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.-++++|+++.-|-....+.+.+.+++++
T Consensus 109 ~~vv~DPv~~~~g~l~~~~~~~~~~~~ll 137 (296)
T PTZ00344 109 LIFLCDPVMGDDGKLYVKEEVVDAYRELI 137 (296)
T ss_pred ceEEECCccccCCceEeCHHHHHHHHHHh
Confidence 45889999987665555677777777654
No 228
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=20.71 E-value=1.6e+02 Score=21.25 Aligned_cols=44 Identities=27% Similarity=0.446 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCC--CccCC--HHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGG--DNHGS--NYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gG--v~~pp--~~fl~~lr~lc~ 158 (159)
++.+++.+... .++-.||++|++.-.+ ..... ..+++.|+++|+
T Consensus 129 ~~~l~~~~~~~----~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~ 176 (193)
T PF13481_consen 129 LEELEAALKEL----YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAK 176 (193)
T ss_dssp HHHHHHHHTT--------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhc----CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 45566665542 3578999999886322 11111 358888888886
Done!