Query psy4805
Match_columns 159
No_of_seqs 174 out of 1151
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 18:12:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 1.9E-31 6.3E-36 224.5 10.7 134 1-159 134-268 (473)
2 4atq_A 4-aminobutyrate transam 100.0 1.2E-28 4E-33 206.6 11.3 125 1-159 131-258 (456)
3 4ao9_A Beta-phenylalanine amin 99.9 5.8E-26 2E-30 190.2 8.8 104 1-159 149-252 (454)
4 4a0g_A Adenosylmethionine-8-am 99.9 1.4E-25 4.7E-30 199.4 10.5 146 1-159 448-627 (831)
5 1ohv_A 4-aminobutyrate aminotr 99.9 4.2E-23 1.4E-27 172.9 15.1 158 1-159 133-290 (472)
6 3i5t_A Aminotransferase; pyrid 99.9 2.9E-22 9.9E-27 168.0 12.5 132 1-159 120-253 (476)
7 3hmu_A Aminotransferase, class 99.9 3.1E-22 1.1E-26 167.7 10.0 132 1-159 122-255 (472)
8 3gju_A Putative aminotransfera 99.8 1.5E-20 5E-25 156.3 12.3 134 1-159 118-253 (460)
9 4ffc_A 4-aminobutyrate aminotr 99.8 2.3E-20 8E-25 155.2 10.6 124 1-159 131-257 (453)
10 3tfu_A Adenosylmethionine-8-am 99.8 5E-20 1.7E-24 153.6 11.2 123 1-159 141-266 (457)
11 3oks_A 4-aminobutyrate transam 99.8 2.5E-20 8.6E-25 154.8 9.3 129 1-159 128-259 (451)
12 4a6r_A Omega transaminase; tra 99.8 8.9E-20 3E-24 151.6 11.3 132 1-159 117-251 (459)
13 3n5m_A Adenosylmethionine-8-am 99.8 1.6E-19 5.3E-24 149.5 11.1 132 1-159 113-247 (452)
14 3dod_A Adenosylmethionine-8-am 99.8 1.3E-19 4.3E-24 150.1 10.3 131 1-159 110-243 (448)
15 2cjg_A L-lysine-epsilon aminot 99.7 2.4E-17 8.3E-22 136.7 9.1 135 1-159 125-263 (449)
16 2yky_A Beta-transaminase; tran 99.5 1.3E-18 4.4E-23 146.1 0.0 104 1-159 162-265 (465)
17 4e77_A Glutamate-1-semialdehyd 99.7 5.9E-17 2E-21 133.0 9.4 118 1-159 115-232 (429)
18 3l44_A Glutamate-1-semialdehyd 99.7 8.4E-17 2.9E-21 132.1 9.3 118 1-159 117-234 (434)
19 2oat_A Ornithine aminotransfer 99.7 1.9E-16 6.6E-21 131.1 9.7 116 1-159 139-255 (439)
20 1z7d_A Ornithine aminotransfer 99.7 1.7E-16 5.8E-21 131.1 9.3 116 1-159 128-244 (433)
21 3k28_A Glutamate-1-semialdehyd 99.7 1.4E-16 4.9E-21 130.8 8.3 118 1-159 115-232 (429)
22 3fq8_A Glutamate-1-semialdehyd 99.6 3.4E-16 1.2E-20 128.3 7.5 117 1-159 114-231 (427)
23 3a8u_X Omega-amino acid--pyruv 99.6 9.1E-16 3.1E-20 126.6 9.9 134 1-159 116-251 (449)
24 3i4j_A Aminotransferase, class 99.6 7.6E-16 2.6E-20 126.3 8.9 124 1-159 95-223 (430)
25 1zod_A DGD, 2,2-dialkylglycine 99.6 3.4E-15 1.2E-19 122.4 11.6 126 1-159 108-235 (433)
26 2epj_A Glutamate-1-semialdehyd 99.6 1.7E-15 5.9E-20 124.4 9.2 117 1-159 118-235 (434)
27 2pb2_A Acetylornithine/succiny 99.6 2.6E-15 9E-20 123.3 8.9 113 1-159 120-233 (420)
28 3dxv_A Alpha-amino-epsilon-cap 99.6 2.5E-15 8.7E-20 123.4 8.4 121 1-159 110-233 (439)
29 3nx3_A Acoat, acetylornithine 99.6 7E-15 2.4E-19 119.0 8.7 112 1-159 99-211 (395)
30 2e7u_A Glutamate-1-semialdehyd 99.5 2.8E-14 9.6E-19 116.8 10.8 115 1-159 114-230 (424)
31 2cy8_A D-phgat, D-phenylglycin 99.5 2E-14 6.9E-19 118.8 5.8 115 1-159 119-233 (453)
32 1s0a_A Adenosylmethionine-8-am 99.5 8.5E-13 2.9E-17 108.0 12.7 124 1-159 109-237 (429)
33 2eo5_A 419AA long hypothetical 99.4 3.8E-13 1.3E-17 110.1 9.7 129 1-159 110-244 (419)
34 3ruy_A Ornithine aminotransfer 99.4 3.4E-12 1.2E-16 102.9 11.0 116 1-159 99-214 (392)
35 4adb_A Succinylornithine trans 99.3 4.3E-12 1.5E-16 102.5 9.0 113 1-159 102-215 (406)
36 1sff_A 4-aminobutyrate aminotr 99.2 9E-11 3.1E-15 95.4 11.7 122 1-159 108-231 (426)
37 2ord_A Acoat, acetylornithine 99.0 4.5E-10 1.6E-14 90.7 7.4 112 1-159 103-215 (397)
38 1vef_A Acetylornithine/acetyl- 99.0 1.4E-09 4.6E-14 87.7 8.3 108 1-159 110-217 (395)
39 2eh6_A Acoat, acetylornithine 98.9 2.1E-09 7.1E-14 85.8 8.0 113 1-159 92-204 (375)
40 2oqx_A Tryptophanase; lyase, p 98.4 4.8E-07 1.6E-11 74.3 7.9 120 1-159 95-215 (467)
41 3l8a_A METC, putative aminotra 98.4 2.5E-07 8.6E-12 75.3 5.3 101 1-159 125-225 (421)
42 1ax4_A Tryptophanase; tryptoph 98.4 1.7E-06 5.9E-11 71.0 9.4 47 111-159 169-215 (467)
43 2w8t_A SPT, serine palmitoyltr 97.9 1.9E-05 6.5E-10 64.4 7.0 93 1-159 130-222 (427)
44 3kki_A CAI-1 autoinducer synth 97.8 5.5E-05 1.9E-09 61.0 7.8 89 2-159 126-214 (409)
45 2ez2_A Beta-tyrosinase, tyrosi 97.6 9.3E-05 3.2E-09 60.5 6.8 105 1-159 96-206 (456)
46 1bs0_A Protein (8-amino-7-oxon 97.6 0.00015 5.2E-09 57.6 7.9 91 2-159 106-196 (384)
47 1svv_A Threonine aldolase; str 97.6 9.8E-05 3.4E-09 57.8 6.2 102 1-159 72-175 (359)
48 3tqx_A 2-amino-3-ketobutyrate 97.5 0.00012 4.1E-09 58.3 5.8 94 2-159 110-203 (399)
49 3lvm_A Cysteine desulfurase; s 97.5 9.5E-05 3.3E-09 59.5 5.1 99 1-159 91-191 (423)
50 1kmj_A Selenocysteine lyase; p 97.5 6.2E-05 2.1E-09 59.9 4.0 102 1-159 91-192 (406)
51 3qhx_A Cystathionine gamma-syn 97.5 5.8E-05 2E-09 61.1 3.8 93 1-159 87-179 (392)
52 1yiz_A Kynurenine aminotransfe 97.4 0.00017 5.6E-09 58.4 5.7 42 111-159 172-213 (429)
53 3mad_A Sphingosine-1-phosphate 97.4 0.00029 9.9E-09 58.8 7.0 102 1-159 166-267 (514)
54 3nmy_A Xometc, cystathionine g 97.4 5.7E-05 1.9E-09 61.6 2.5 39 111-159 142-180 (400)
55 2ay1_A Aroat, aromatic amino a 97.3 0.00042 1.4E-08 55.2 6.8 103 2-159 98-200 (394)
56 2ctz_A O-acetyl-L-homoserine s 97.3 0.00013 4.6E-09 59.5 3.8 93 2-159 80-172 (421)
57 1wyu_B Glycine dehydrogenase s 97.3 0.00061 2.1E-08 56.4 7.6 103 1-159 129-231 (474)
58 3ke3_A Putative serine-pyruvat 97.3 0.00021 7.3E-09 57.2 4.6 104 1-159 57-166 (379)
59 1fc4_A 2-amino-3-ketobutyrate 97.3 0.00046 1.6E-08 55.1 6.4 94 2-159 112-205 (401)
60 3a2b_A Serine palmitoyltransfe 97.3 0.00063 2.1E-08 54.3 7.0 93 1-159 109-201 (398)
61 3kgw_A Alanine-glyoxylate amin 97.3 0.0001 3.4E-09 58.4 2.3 96 1-159 80-176 (393)
62 1ajs_A Aspartate aminotransfer 97.3 0.00065 2.2E-08 54.5 7.2 108 1-159 105-214 (412)
63 3zrp_A Serine-pyruvate aminotr 97.2 0.00024 8.4E-09 56.0 4.2 78 48-159 77-155 (384)
64 1cs1_A CGS, protein (cystathio 97.2 0.0003 1E-08 56.3 4.7 39 111-159 127-165 (386)
65 3piu_A 1-aminocyclopropane-1-c 97.2 0.00046 1.6E-08 56.0 5.8 106 1-159 117-222 (435)
66 2q7w_A Aspartate aminotransfer 97.2 0.0009 3.1E-08 53.2 7.4 104 1-159 100-203 (396)
67 1t3i_A Probable cysteine desul 97.2 0.00035 1.2E-08 55.8 4.6 99 1-159 96-197 (420)
68 1iay_A ACC synthase 2, 1-amino 97.1 0.0013 4.5E-08 53.1 7.7 48 111-159 172-219 (428)
69 3op7_A Aminotransferase class 97.1 0.0004 1.4E-08 55.0 4.5 99 1-159 87-185 (375)
70 3f0h_A Aminotransferase; RER07 97.1 0.0002 6.8E-09 56.6 2.3 95 1-159 77-172 (376)
71 3nnk_A Ureidoglycine-glyoxylat 97.1 0.00021 7.3E-09 57.0 2.5 95 2-159 71-166 (411)
72 2e7j_A SEP-tRNA:Cys-tRNA synth 97.1 0.0016 5.3E-08 51.2 7.5 100 2-159 76-175 (371)
73 3f9t_A TDC, L-tyrosine decarbo 97.1 0.0015 5.2E-08 51.4 7.2 107 1-159 92-199 (397)
74 1gc0_A Methionine gamma-lyase; 97.0 0.00068 2.3E-08 54.6 5.1 92 2-159 87-178 (398)
75 1v72_A Aldolase; PLP-dependent 97.0 0.00023 8E-09 55.6 1.8 47 111-159 123-171 (356)
76 1u08_A Hypothetical aminotrans 97.0 0.0023 8E-08 50.8 7.6 98 1-159 97-194 (386)
77 2dr1_A PH1308 protein, 386AA l 96.9 0.00094 3.2E-08 52.7 5.1 97 1-159 77-174 (386)
78 3euc_A Histidinol-phosphate am 96.9 0.0018 6.3E-08 50.9 6.7 97 2-159 92-188 (367)
79 3dzz_A Putative pyridoxal 5'-p 96.9 0.00083 2.9E-08 53.2 4.7 101 1-159 91-191 (391)
80 3fdb_A Beta C-S lyase, putativ 96.9 0.0016 5.3E-08 51.4 6.1 95 1-159 87-181 (377)
81 1c7n_A Cystalysin; transferase 96.9 0.0015 5.1E-08 52.1 6.0 101 1-159 95-195 (399)
82 1v2d_A Glutamine aminotransfer 96.9 0.00044 1.5E-08 54.9 2.7 100 1-159 84-183 (381)
83 2bwn_A 5-aminolevulinate synth 96.9 0.005 1.7E-07 49.1 8.9 43 111-159 164-206 (401)
84 3ndn_A O-succinylhomoserine su 96.9 0.00056 1.9E-08 55.9 3.2 39 111-159 156-194 (414)
85 2rfv_A Methionine gamma-lyase; 96.8 0.00078 2.7E-08 54.1 3.9 89 2-159 86-177 (398)
86 3acz_A Methionine gamma-lyase; 96.8 0.00041 1.4E-08 55.8 2.0 39 111-159 134-172 (389)
87 3kax_A Aminotransferase, class 96.7 0.00098 3.4E-08 52.6 3.7 100 1-159 88-187 (383)
88 1j32_A Aspartate aminotransfer 96.7 0.0018 6.2E-08 51.4 5.2 98 2-159 97-194 (388)
89 2o0r_A RV0858C (N-succinyldiam 96.7 0.0013 4.3E-08 52.9 4.3 99 2-159 93-191 (411)
90 1eg5_A Aminotransferase; PLP-d 96.7 0.0013 4.6E-08 51.7 4.4 99 1-159 67-167 (384)
91 1d2f_A MALY protein; aminotran 96.7 0.0011 3.8E-08 52.8 3.8 101 1-159 93-193 (390)
92 3fvs_A Kynurenine--oxoglutarat 96.7 0.0011 3.9E-08 53.1 3.7 42 111-159 164-205 (422)
93 1gd9_A Aspartate aminotransfer 96.6 0.0013 4.6E-08 52.1 3.6 42 111-159 150-191 (389)
94 2zc0_A Alanine glyoxylate tran 96.6 0.002 6.8E-08 51.4 4.6 101 2-159 105-206 (407)
95 4dq6_A Putative pyridoxal phos 96.6 0.0018 6.2E-08 51.2 4.3 99 1-159 96-195 (391)
96 3b46_A Aminotransferase BNA3; 96.6 0.0013 4.4E-08 53.8 3.5 42 111-159 191-232 (447)
97 3pj0_A LMO0305 protein; struct 96.6 0.0014 4.8E-08 51.4 3.5 34 126-159 136-169 (359)
98 2o1b_A Aminotransferase, class 96.6 0.0029 1E-07 50.8 5.4 98 1-159 115-212 (404)
99 4f4e_A Aromatic-amino-acid ami 96.5 0.005 1.7E-07 49.6 6.7 104 1-159 123-226 (420)
100 4eb5_A Probable cysteine desul 96.5 0.0073 2.5E-07 47.4 7.3 101 1-159 66-166 (382)
101 2dou_A Probable N-succinyldiam 96.5 0.002 6.9E-08 50.9 4.0 96 2-159 94-189 (376)
102 3ecd_A Serine hydroxymethyltra 96.5 0.0023 8E-08 51.1 4.3 37 111-159 161-198 (425)
103 3b1d_A Betac-S lyase; HET: PLP 95.5 0.00043 1.5E-08 55.3 0.0 43 111-159 153-195 (392)
104 1vjo_A Alanine--glyoxylate ami 96.5 0.0015 5.1E-08 51.9 3.1 96 1-159 91-187 (393)
105 3cq5_A Histidinol-phosphate am 96.5 0.0059 2E-07 48.2 6.5 79 48-158 116-194 (369)
106 1xi9_A Putative transaminase; 96.5 0.0012 4E-08 53.0 2.4 98 2-159 108-205 (406)
107 2cb1_A O-acetyl homoserine sul 96.4 0.0018 6.3E-08 52.4 3.2 39 111-159 130-168 (412)
108 3fsl_A Aromatic-amino-acid ami 96.4 0.0087 3E-07 47.4 7.1 104 1-159 101-204 (397)
109 3isl_A Purine catabolism prote 96.4 0.0022 7.6E-08 51.1 3.5 95 2-159 69-164 (416)
110 1qz9_A Kynureninase; kynurenin 96.4 0.0034 1.1E-07 50.2 4.5 29 127-159 165-193 (416)
111 2z9v_A Aspartate aminotransfer 96.3 0.0026 8.8E-08 50.4 3.7 97 1-159 65-162 (392)
112 3ht4_A Aluminum resistance pro 96.3 0.0053 1.8E-07 50.5 5.7 107 2-159 90-197 (431)
113 3ele_A Amino transferase; RER0 96.3 0.0046 1.6E-07 49.1 5.1 99 1-159 105-203 (398)
114 3e2y_A Kynurenine-oxoglutarate 96.3 0.0033 1.1E-07 50.1 4.1 42 111-159 157-198 (410)
115 1elu_A L-cysteine/L-cystine C- 96.3 0.0012 4.2E-08 52.1 1.5 97 1-158 82-181 (390)
116 4hvk_A Probable cysteine desul 96.3 0.0076 2.6E-07 47.1 6.1 99 1-159 66-166 (382)
117 3e9k_A Kynureninase; kynurenin 96.3 0.0059 2E-07 49.9 5.6 109 1-159 134-242 (465)
118 3vax_A Putative uncharacterize 96.3 0.005 1.7E-07 48.9 5.0 101 1-159 86-187 (400)
119 3jtx_A Aminotransferase; NP_28 96.3 0.0022 7.6E-08 50.9 2.9 103 1-159 97-199 (396)
120 2bkw_A Alanine-glyoxylate amin 96.3 0.0033 1.1E-07 49.5 3.9 40 111-159 126-165 (385)
121 1o4s_A Aspartate aminotransfer 96.2 0.0038 1.3E-07 49.8 4.2 99 1-159 107-205 (389)
122 2gb3_A Aspartate aminotransfer 96.2 0.00064 2.2E-08 54.7 -0.4 32 127-159 174-205 (409)
123 3n0l_A Serine hydroxymethyltra 96.2 0.01 3.5E-07 47.2 6.6 38 111-159 153-190 (417)
124 2z61_A Probable aspartate amin 96.2 0.0031 1.1E-07 49.7 3.5 86 1-158 95-180 (370)
125 2x5f_A Aspartate_tyrosine_phen 96.1 0.0096 3.3E-07 48.0 6.2 100 2-159 120-220 (430)
126 2jis_A Cysteine sulfinic acid 96.1 0.035 1.2E-06 46.2 9.7 115 1-159 171-287 (515)
127 1m32_A 2-aminoethylphosphonate 96.1 0.0031 1.1E-07 49.1 3.0 97 1-159 62-159 (366)
128 3nra_A Aspartate aminotransfer 96.1 0.006 2E-07 48.5 4.7 42 111-159 169-210 (407)
129 1pff_A Methionine gamma-lyase; 96.0 0.0024 8E-08 49.7 1.9 30 126-159 82-111 (331)
130 3aow_A Putative uncharacterize 96.0 0.01 3.5E-07 48.6 5.6 102 1-159 146-248 (448)
131 2dkj_A Serine hydroxymethyltra 96.0 0.0062 2.1E-07 48.4 4.2 37 111-159 152-189 (407)
132 3mc6_A Sphingosine-1-phosphate 95.9 0.0018 6E-08 53.6 1.0 103 1-159 132-234 (497)
133 3dyd_A Tyrosine aminotransfera 95.9 0.0015 5.2E-08 52.9 0.2 99 1-159 124-222 (427)
134 2x5d_A Probable aminotransfera 95.8 0.0047 1.6E-07 49.5 2.9 99 1-159 105-203 (412)
135 2huf_A Alanine glyoxylate amin 95.8 0.0037 1.2E-07 49.5 2.2 96 1-159 76-172 (393)
136 2zyj_A Alpha-aminodipate amino 95.7 0.0064 2.2E-07 48.4 3.5 96 2-159 98-194 (397)
137 1qgn_A Protein (cystathionine 95.7 0.018 6.3E-07 47.5 6.3 40 111-159 189-228 (445)
138 3ffh_A Histidinol-phosphate am 95.4 0.023 7.9E-07 44.5 5.7 96 1-158 90-185 (363)
139 3g0t_A Putative aminotransfera 95.4 0.015 5.3E-07 46.6 4.6 102 1-159 111-213 (437)
140 2ch1_A 3-hydroxykynurenine tra 95.4 0.0082 2.8E-07 47.5 2.9 96 1-159 75-171 (396)
141 2qma_A Diaminobutyrate-pyruvat 95.4 0.05 1.7E-06 45.0 7.8 44 112-159 243-286 (497)
142 3ly1_A Putative histidinol-pho 95.4 0.047 1.6E-06 42.4 7.1 97 1-157 74-170 (354)
143 3lws_A Aromatic amino acid bet 95.3 0.015 5.1E-07 45.5 4.1 31 128-159 136-167 (357)
144 1vp4_A Aminotransferase, putat 95.2 0.017 5.9E-07 46.5 4.4 84 48-159 133-219 (425)
145 1yaa_A Aspartate aminotransfer 95.2 0.07 2.4E-06 42.5 7.9 103 2-159 105-207 (412)
146 1bw0_A TAT, protein (tyrosine 95.2 0.01 3.6E-07 47.4 2.9 99 1-159 110-208 (416)
147 1n8p_A Cystathionine gamma-lya 95.2 0.023 7.7E-07 45.8 4.9 30 126-159 137-166 (393)
148 3ri6_A O-acetylhomoserine sulf 95.1 0.033 1.1E-06 45.7 5.6 39 111-159 157-195 (430)
149 3cai_A Possible aminotransfera 95.0 0.012 3.9E-07 46.9 2.8 30 126-159 164-193 (406)
150 3a9z_A Selenocysteine lyase; P 95.0 0.0085 2.9E-07 48.2 2.0 39 111-159 165-203 (432)
151 3ezs_A Aminotransferase ASPB; 95.0 0.014 4.7E-07 45.9 3.0 30 129-159 156-185 (376)
152 1lc5_A COBD, L-threonine-O-3-p 95.0 0.026 8.9E-07 44.3 4.6 31 127-159 146-177 (364)
153 3h7f_A Serine hydroxymethyltra 94.9 0.023 7.9E-07 46.4 4.2 37 111-159 174-211 (447)
154 3cog_A Cystathionine gamma-lya 94.8 0.019 6.5E-07 46.4 3.4 39 111-159 141-179 (403)
155 1o69_A Aminotransferase; struc 94.8 0.027 9.4E-07 44.9 4.3 95 1-159 53-147 (394)
156 3h14_A Aminotransferase, class 94.6 0.015 5E-07 46.2 2.3 32 127-159 161-192 (391)
157 2aeu_A Hypothetical protein MJ 94.5 0.079 2.7E-06 42.1 6.4 30 127-159 140-170 (374)
158 2okj_A Glutamate decarboxylase 94.5 0.26 8.8E-06 40.7 9.8 45 111-159 229-273 (504)
159 2yrr_A Aminotransferase, class 94.5 0.039 1.3E-06 42.5 4.4 40 111-159 113-152 (353)
160 1ibj_A CBL, cystathionine beta 94.4 0.066 2.3E-06 44.3 5.8 39 111-159 207-245 (464)
161 3t18_A Aminotransferase class 94.3 0.071 2.4E-06 42.5 5.7 46 111-158 163-209 (413)
162 3ftb_A Histidinol-phosphate am 94.2 0.06 2E-06 41.9 5.0 40 112-159 136-175 (361)
163 1fg7_A Histidinol phosphate am 94.2 0.076 2.6E-06 41.7 5.6 95 2-158 82-176 (356)
164 3rq1_A Aminotransferase class 94.1 0.097 3.3E-06 41.8 6.2 46 111-158 164-210 (418)
165 2r2n_A Kynurenine/alpha-aminoa 94.1 0.047 1.6E-06 44.0 4.3 48 111-159 168-222 (425)
166 3meb_A Aspartate aminotransfer 93.8 0.47 1.6E-05 38.5 9.8 45 111-159 189-233 (448)
167 3nyt_A Aminotransferase WBPE; 93.8 0.0095 3.3E-07 47.0 -0.4 37 1-65 56-92 (367)
168 2oga_A Transaminase; PLP-depen 93.6 0.036 1.2E-06 44.2 2.7 93 1-159 84-176 (399)
169 3ez1_A Aminotransferase MOCR f 93.4 0.16 5.5E-06 40.5 6.3 44 111-159 160-205 (423)
170 3get_A Histidinol-phosphate am 92.9 0.12 4.3E-06 40.2 4.8 41 111-158 143-183 (365)
171 3gbx_A Serine hydroxymethyltra 92.6 0.082 2.8E-06 41.9 3.5 37 111-159 158-195 (420)
172 3if2_A Aminotransferase; YP_26 92.5 0.05 1.7E-06 43.8 2.0 45 111-159 193-237 (444)
173 1e5e_A MGL, methionine gamma-l 92.2 0.16 5.3E-06 40.9 4.7 30 126-159 146-175 (404)
174 3b8x_A WBDK, pyridoxamine 5-ph 91.3 0.13 4.6E-06 40.6 3.3 44 1-66 55-98 (390)
175 1mdo_A ARNB aminotransferase; 91.2 0.092 3.2E-06 41.3 2.2 93 1-159 60-152 (393)
176 4eu1_A Mitochondrial aspartate 90.8 0.55 1.9E-05 37.2 6.4 45 111-159 170-214 (409)
177 4e1o_A HDC, histidine decarbox 90.7 1.1 3.7E-05 36.8 8.3 19 2-20 152-170 (481)
178 1iug_A Putative aspartate amin 90.6 0.046 1.6E-06 42.3 -0.1 33 1-62 57-89 (352)
179 2fnu_A Aminotransferase; prote 90.3 0.061 2.1E-06 42.0 0.3 39 1-65 53-91 (375)
180 7aat_A Aspartate aminotransfer 90.0 0.81 2.8E-05 36.0 6.8 45 111-159 162-206 (401)
181 3vp6_A Glutamate decarboxylase 89.5 2.2 7.7E-05 35.3 9.4 45 111-159 232-276 (511)
182 3dr4_A Putative perosamine syn 88.7 0.055 1.9E-06 42.8 -1.0 39 1-67 77-115 (391)
183 1b9h_A AHBA synthase, protein 87.8 0.2 6.7E-06 39.5 1.7 36 2-65 60-95 (388)
184 2vi8_A Serine hydroxymethyltra 87.6 0.57 2E-05 36.8 4.3 37 111-159 152-189 (405)
185 3uwc_A Nucleotide-sugar aminot 86.6 0.11 3.7E-06 40.6 -0.4 37 1-65 59-95 (374)
186 3tcm_A Alanine aminotransferas 86.1 1.9 6.3E-05 35.6 6.8 48 111-159 221-268 (500)
187 3ppl_A Aspartate aminotransfer 85.0 1.8 6.3E-05 34.4 6.1 43 111-159 169-213 (427)
188 3jzl_A Putative cystathionine 84.3 3.2 0.00011 33.5 7.3 39 111-159 149-191 (409)
189 2c81_A Glutamine-2-deoxy-scyll 83.7 0.24 8.3E-06 39.5 0.3 36 2-65 64-99 (418)
190 2fq6_A Cystathionine beta-lyas 83.7 0.31 1.1E-05 39.5 1.0 29 127-159 167-195 (415)
191 3k40_A Aromatic-L-amino-acid d 83.6 3.8 0.00013 33.5 7.6 19 2-20 146-164 (475)
192 3ei9_A LL-diaminopimelate amin 82.0 0.84 2.9E-05 36.4 2.9 32 127-159 198-229 (432)
193 2po3_A 4-dehydrase; external a 81.5 0.69 2.4E-05 36.9 2.2 34 1-64 73-106 (424)
194 2dgk_A GAD-beta, GADB, glutama 81.3 3.7 0.00013 33.0 6.6 19 1-19 109-127 (452)
195 1b5p_A Protein (aspartate amin 80.3 1.1 3.6E-05 35.3 2.9 41 111-159 154-195 (385)
196 3hvy_A Cystathionine beta-lyas 76.2 12 0.00042 30.3 8.2 41 111-159 164-208 (427)
197 2x3l_A ORN/Lys/Arg decarboxyla 76.2 0.89 3E-05 37.0 1.3 28 127-159 146-173 (446)
198 3i16_A Aluminum resistance pro 75.0 15 0.00051 29.8 8.4 41 111-159 164-208 (427)
199 1js3_A DDC;, DOPA decarboxylas 73.4 15 0.0005 29.8 8.0 18 1-18 145-162 (486)
200 3bb8_A CDP-4-keto-6-deoxy-D-gl 72.5 0.87 3E-05 36.6 0.4 46 1-66 83-128 (437)
201 1jg8_A L-ALLO-threonine aldola 70.0 4.4 0.00015 30.8 4.0 48 111-159 116-164 (347)
202 3f6t_A Aspartate aminotransfer 67.5 9.7 0.00033 31.6 5.8 41 111-158 234-274 (533)
203 3d6k_A Putative aminotransfera 65.2 9.1 0.00031 30.3 5.0 42 111-158 167-209 (422)
204 3hbx_A GAD 1, glutamate decarb 60.2 19 0.00066 29.5 6.2 18 2-19 124-141 (502)
205 3asa_A LL-diaminopimelate amin 52.9 9.2 0.00031 29.9 3.0 32 127-159 163-194 (400)
206 3bc8_A O-phosphoseryl-tRNA(SEC 52.7 30 0.001 28.5 6.1 43 111-159 184-226 (450)
207 3qgu_A LL-diaminopimelate amin 52.0 9.3 0.00032 30.4 2.9 32 127-159 209-240 (449)
208 3g7q_A Valine-pyruvate aminotr 47.9 12 0.0004 29.2 2.9 33 126-159 179-211 (417)
209 1rv3_A Serine hydroxymethyltra 45.8 70 0.0024 25.8 7.4 38 111-159 182-219 (483)
210 3frk_A QDTB; aminotransferase, 43.1 6.9 0.00024 30.2 0.8 36 1-64 57-92 (373)
211 2z67_A O-phosphoseryl-tRNA(SEC 42.4 66 0.0023 25.7 6.7 43 111-159 216-259 (456)
212 3hdo_A Histidinol-phosphate am 39.4 11 0.00036 29.0 1.3 38 1-67 88-125 (360)
213 1rfm_A L-sulfolactate dehydrog 38.2 19 0.00066 28.6 2.7 32 4-64 90-121 (344)
214 4h8a_A Ureidoglycolate dehydro 38.2 19 0.00066 28.5 2.7 32 4-64 92-123 (339)
215 3i0p_A Malate dehydrogenase; a 36.9 21 0.00071 28.6 2.7 32 4-64 97-128 (365)
216 1nxu_A Hypothetical oxidoreduc 36.8 21 0.00072 28.2 2.7 32 4-64 90-121 (333)
217 2x06_A L-sulfolactate dehydrog 36.6 31 0.0011 27.3 3.7 32 4-64 90-121 (344)
218 1vbi_A Type 2 malate/lactate d 36.4 22 0.00074 28.3 2.7 32 4-64 89-120 (344)
219 1xrh_A Ureidoglycolate dehydro 36.1 22 0.00075 28.3 2.7 32 4-64 92-123 (351)
220 1bm4_A Protein (moloney murine 36.0 14 0.00048 18.9 1.0 22 134-158 6-27 (32)
221 3uoe_A Dehydrogenase; structur 35.2 23 0.00079 28.3 2.7 32 4-64 113-144 (357)
222 1v9n_A Malate dehydrogenase; r 34.6 24 0.00081 28.2 2.7 32 4-64 101-132 (360)
223 1z2i_A Malate dehydrogenase; s 34.4 24 0.00083 28.2 2.7 32 4-64 99-130 (358)
224 1wtj_A Ureidoglycolate dehydro 32.4 24 0.00081 28.0 2.3 32 4-64 100-131 (343)
225 2oyy_A Hexameric cytochrome; a 32.4 30 0.001 21.1 2.3 18 3-20 13-30 (76)
226 2rod_B NOXA, noxaa; MCL-1, apo 30.6 21 0.00073 16.9 1.1 14 145-158 3-16 (27)
227 2g8y_A Malate/L-lactate dehydr 29.7 28 0.00095 28.1 2.3 32 4-64 116-147 (385)
228 3zs7_A Pyridoxal kinase; trans 26.1 29 0.00098 26.6 1.8 30 129-158 112-141 (300)
229 2f6m_A Suppressor protein STP2 25.8 22 0.00074 21.3 0.8 16 144-159 34-49 (65)
230 3h74_A Pyridoxal kinase; PSI-I 21.4 1.7E+02 0.0057 21.9 5.3 43 111-158 89-133 (282)
231 3ihj_A Alanine aminotransferas 20.9 1.6E+02 0.0055 23.8 5.4 47 111-159 220-266 (498)
232 3mbh_A Putative phosphomethylp 20.1 1.8E+02 0.0061 21.8 5.2 45 111-158 92-138 (291)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.97 E-value=1.9e-31 Score=224.51 Aligned_cols=134 Identities=24% Similarity=0.343 Sum_probs=103.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||+||||||+|+..+ |. |+ |.+||+|+++|||+|++++++|+....+....+
T Consensus 134 ~~sGsEA~e~AiKlAr~~~~~~--g~-----------------~~--r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~ 192 (473)
T 4e3q_A 134 TNSGSEANDTMVKMLWFLHAAE--GK-----------------PQ--KRKILTRWNAYHGVTAVSASMTGKPYNSVFGLP 192 (473)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCS
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--cceEEEeeceECCCccccccccccccccccCCC
Confidence 5899999999999999998776 43 45 899999999999999999999997543333334
Q ss_pred CCCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..++.++|.|. ++++.. ....+.+...+.+++++.|.+.. +++|||||+|||||+||+++||++||++||++|+|
T Consensus 193 ~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 193 LPGFVHLTCPHYWRYGEE--GETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp CTTEEEECCCCHHHHSCT--TCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCcccccCCCcccccccc--cchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 44556667664 222111 01123455667788888887763 57899999999999999999999999999999985
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.95 E-value=1.2e-28 Score=206.64 Aligned_cols=125 Identities=24% Similarity=0.254 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcc-ccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKY-IHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~-~~~~~~ 79 (159)
+||||||||+||||||.|+ + |.+||+|+++|||+|++++++++... ++..+.
T Consensus 131 ~~sGsEA~e~AlklAr~~t-------------------------~--r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 183 (456)
T 4atq_A 131 FNSGAEAVENAVKVARLAT-------------------------G--RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFG 183 (456)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSC
T ss_pred eCChHHHHHHHHHHHhhhh-------------------------c--CCeEEEEecccCCccccccccccCccccccCCC
Confidence 4899999999999999995 4 88999999999999999999998764 333444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
|. .++.++|+|. ++... .+..+..+++.+.+.++... ++++|||||+|||||+||+++||++||++||++|
T Consensus 184 p~~~~~~~~p~~~~~~~~~------~~~~~~~~~~~~~~~~e~~~-~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc 256 (456)
T 4atq_A 184 PFAPEVYRMPMSYPFREEN------PEITGAEAAKRAITMIEKQI-GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWA 256 (456)
T ss_dssp SCCSSEEEECCCCGGGCSS------TTCCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CccccceecccccccccCC------CcccHHHHHHHHHHHHHHhh-cCCceEEEEeccccCCCCccccchhhhHHHHHHH
Confidence 43 2445566553 11111 11111222233223333321 2569999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
+|
T Consensus 257 ~~ 258 (456)
T 4atq_A 257 KE 258 (456)
T ss_dssp HH
T ss_pred hh
Confidence 85
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.93 E-value=5.8e-26 Score=190.18 Aligned_cols=104 Identities=24% Similarity=0.362 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.|||+||.|+ | |.+||+|+++|||+|+++++.++....
T Consensus 149 ~~SGsEA~e~AiklAr~~t-------------------------g--r~~ii~~~~~yHG~t~~~~~~~~~~~~------ 195 (454)
T 4ao9_A 149 TNSGTEANLMALTAALHFT-------------------------G--RRKIVVFSGGYHGGVLGFGARPSPTTV------ 195 (454)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------T--CCEEEEETTCBCSTTCBBSSSBCTTSC------
T ss_pred eCchHHHHHHHHHHHHhcc-------------------------c--CCeEEEEeCCcCCccccccccccCccC------
Confidence 4899999999999999996 4 889999999999999887766543211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
|...... +++| ++.++++|+++ +++|||||+|||||++|+++||++||++||+||+|
T Consensus 196 -------~~~~~~~------p~nd------~~~l~~~l~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~ 252 (454)
T 4ao9_A 196 -------PFDFLVL------PYND------AQTARAQIERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQ 252 (454)
T ss_dssp -------CSEEEEE------CTTC------HHHHHHHHHHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHH
T ss_pred -------CCCcccC------CCch------HHHHHHHHhhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhh
Confidence 1100011 2344 67788888876 56899999999999999999999999999999985
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.92 E-value=1.4e-25 Score=199.44 Aligned_cols=146 Identities=16% Similarity=0.215 Sum_probs=92.5
Q ss_pred CCCcchHHHHHHHHH-HHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcccccc--
Q psy4805 1 MMCGSCSNENAYKNI-FIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKI-- 77 (159)
Q Consensus 1 ~~sGseA~e~AlklA-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~-- 77 (159)
+||||||||+||||| |+|+.++ |.... .+ ...++ |.+||+|+++|||+|++++++|+...++..
T Consensus 448 ~~SGSeA~E~AlK~A~r~~~~~~--g~~~~---~~------~~~~~--r~~iI~~~~syHG~T~gals~tg~~~~~~~~~ 514 (831)
T 4a0g_A 448 SDNGSTAIEIALKMAFRKFCVDH--NFCEA---TE------EEKHI--VVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQ 514 (831)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTT--TC------------------C--CEEEEEETTCCCCSSHHHHHTSCCCGGGSTTT
T ss_pred CCChhHHHHHHHHHHHHHHHhhc--CCCcc---cc------ccccC--ccEEEEecCCcccCceeeeeccCccccccccc
Confidence 489999999999999 5677654 32000 00 00013 889999999999999999999986544431
Q ss_pred --CC----CCC---------CCCcccCCC-CCCC------Cccc------hhhhhHHHHHHHHHHHHHHHHhc--cCCCC
Q psy4805 78 --DI----PAF---------DWPIASFPK-YKYP------LEEN------ERENKAEDEKCLAEVEDLITKYN--KKGTP 127 (159)
Q Consensus 78 --~~----~~~---------~~~~~p~p~-~~~~------~~~~------~~~~~~~~~~~~~~le~~i~~~~--~~~~~ 127 (159)
+. +.+ ++.+++.|. ++.. +... ....+.+...|+++|+++|++.. ..+++
T Consensus 515 ~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~ 594 (831)
T 4a0g_A 515 QPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAH 594 (831)
T ss_dssp CTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CE
T ss_pred cccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCc
Confidence 11 100 112234442 2211 1000 00012234567788888886421 12578
Q ss_pred eEEEEEccc-ccCCCCccCCHHHHHHHHHHhcC
Q psy4805 128 VAGIVVEPI-QSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 128 vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
|||||+||| ||+||++++|++||++|+++|++
T Consensus 595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~ 627 (831)
T 4a0g_A 595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRN 627 (831)
T ss_dssp EEEEEECCSEETTTTSEEECHHHHHHHHHHHHH
T ss_pred EEEEEEecccccCCCCccCCHHHHHHHHHHHHH
Confidence 999999996 99999999999999999999985
No 5
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.90 E-value=4.2e-23 Score=172.91 Aligned_cols=158 Identities=70% Similarity=1.215 Sum_probs=110.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||||.|||+||+|++++.+|. ..+|+.|..+.|.+..+|.+|.+||+|+++|||+|.+++++++....+..+.+
T Consensus 133 ~~sGseA~~~Aik~a~~~~~~~~~~~-~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~ 211 (472)
T 1ohv_A 133 MACGSCSNENAFKTIFMWYRSKERGQ-SAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIP 211 (472)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSC
T ss_pred eCCchhHHHHHHHHHHHHhhhhccCc-ccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCC
Confidence 48999999999999999975321121 12344455555555555522589999999999999999999986543332333
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..++.++++|.+++|......+++.+...++++|+++|..+.....++++||+||+++++|+++||++||++|+++|++
T Consensus 212 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~ 290 (472)
T 1ohv_A 212 SFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRK 290 (472)
T ss_dssp CCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHH
T ss_pred CCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHH
Confidence 3344556777655553221123344445568889988876421112799999999999999999999999999999974
No 6
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.88 E-value=2.9e-22 Score=167.97 Aligned_cols=132 Identities=20% Similarity=0.147 Sum_probs=103.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||||||+.|||+||+++..+ |. +| |.+||+++++|||.|.+++++++...++..+.+
T Consensus 120 ~~sGseA~~~Aik~a~~~~~~~--g~-----------------~~--~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~ 178 (476)
T 3i5t_A 120 TTGGSTAVDSALRFSEFYNNVL--GR-----------------PQ--KKRIIVRYDGYHGSTALTAACTGRTGNWPNFDI 178 (476)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCC
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEEcCCcCcCChhhccccCChhhccccCC
Confidence 4899999999999999998665 43 45 889999999999999999999998766655554
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.+++.|. +++ +.. ..+.+...++++|++++.+.. ++++++||+||+|+.+|++++|++||++|+++|+
T Consensus 179 ~~~~~~~~~~p~~~~~-~~~---~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~ 252 (476)
T 3i5t_A 179 AQDRISFLSSPNPRHA-GNR---SQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICE 252 (476)
T ss_dssp CCTTEEEECCCCGGGC-TTS---CHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred CCCCcEEeCCCccccc-CCC---chHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHH
Confidence 3 3445566653 222 111 123445567889999887652 3689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 253 ~ 253 (476)
T 3i5t_A 253 K 253 (476)
T ss_dssp H
T ss_pred H
Confidence 5
No 7
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.87 E-value=3.1e-22 Score=167.70 Aligned_cols=132 Identities=23% Similarity=0.293 Sum_probs=101.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+||||||||.|||+||.|+..+ |. ++ |.+||+|+++|||.|.+++++++...++..+.+
T Consensus 122 ~~sGseA~~~aik~a~~~~~~~--g~-----------------~~--~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~ 180 (472)
T 3hmu_A 122 AGGGSEANDTNIRMVRTYWQNK--GQ-----------------PE--KTVIISRKNAYHGSTVASSALGGMAGMHAQSGL 180 (472)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCC
T ss_pred eCCHHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEEcCcCCCccHHhhhccCChhhccccCC
Confidence 4899999999999999998765 43 34 889999999999999999999987655554442
Q ss_pred CCCCCcccCCC-CC-CCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AFDWPIASFPK-YK-YPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~~~~~~p~p~-~~-~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
..++.++|.|. ++ .+. . ..+.+...++++|+++|.+.. ++++++||+||+|+.+|++++|++||++|+++|+
T Consensus 181 ~~~~~~v~~p~~~~~~~~-~---~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~ 254 (472)
T 3hmu_A 181 IPDVHHINQPNWWAEGGD-M---DPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICD 254 (472)
T ss_dssp CSSEEEECCCCHHHHCTT-C---CHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCcEEeCCCccccCCcc-c---CHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHH
Confidence 23445556553 22 111 0 123445566888999887652 3689999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 255 ~ 255 (472)
T 3hmu_A 255 K 255 (472)
T ss_dssp H
T ss_pred H
Confidence 5
No 8
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.84 E-value=1.5e-20 Score=156.34 Aligned_cols=134 Identities=21% Similarity=0.246 Sum_probs=102.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.|+..+ |. ++ +.+||+++++|||.|.+++++++...++..+.+
T Consensus 118 ~~gGseA~~~al~~~~~~~~~~--g~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 176 (460)
T 3gju_A 118 GLSGSDANETNIKLIWYYNNVL--GR-----------------PE--KKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDL 176 (460)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTC
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCCCHHHhhccCCcccccccCC
Confidence 4899999999999999998665 43 34 889999999999999999999987766555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .++.++|.|. ++++.... ..+.+...++++|++.+.+.. ++++++||+||+++.+|++++|++||++|+++|+
T Consensus 177 ~~~~~~~~~~p~~~~~~~~g~--~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~ 252 (460)
T 3gju_A 177 PRAPVLHTEAPYYFRRTDRSM--SEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLK 252 (460)
T ss_dssp SCTTEEEECCCCGGGCSCTTC--CHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred CCCCCEEeCCCccccCCcccc--ChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 3 2445566553 33221000 123345566888998887642 3589999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 253 ~ 253 (460)
T 3gju_A 253 K 253 (460)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.83 E-value=2.3e-20 Score=155.19 Aligned_cols=124 Identities=22% Similarity=0.237 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++||||||+.|||+||.++ | |.+||+++++|||.|.+++++++.. .++..+.
T Consensus 131 ~~sGseA~~~alk~a~~~~-------------------------g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 183 (453)
T 4ffc_A 131 FNSGAEAVENAIKVARLAT-------------------------G--RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFG 183 (453)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSC
T ss_pred eCcHHHHHHHHHHHHHHhc-------------------------C--CCEEEEEcCccCCcchHHHhhcCCCcccccCCC
Confidence 4899999999999999984 4 7899999999999999999999864 4444444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .++.++|+|. ++++.... .+.+...+++.|++.+. .+++++||+||++++||++++|++||++|+++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~l~~~i~-----~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~ 255 (453)
T 4ffc_A 184 PFAPEVYRMPASYPLRDEPGLT---GEEAARRAISRIETQIG-----AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWA 255 (453)
T ss_dssp SCCSSEEEECCCCTTTSCTTCC---HHHHHHHHHHHHHHHTC-----GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHH
T ss_pred CCCCCcEEeCCCccccCccccc---hHHHHHHHHHHHHHhcC-----CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHH
Confidence 43 2445566653 33332110 11222233445544432 358999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 256 ~~ 257 (453)
T 4ffc_A 256 SE 257 (453)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 10
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.82 E-value=5e-20 Score=153.64 Aligned_cols=123 Identities=24% Similarity=0.376 Sum_probs=90.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCC-CccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTH-SKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~-~~~~~~~~~ 79 (159)
++|||||+|.|||+++.|+..+ |. +| +.+||+++++|||.|.+++++++ ...++..+.
T Consensus 141 ~~sGseA~~~Alk~a~~~~~~~--g~-----------------~g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 199 (457)
T 3tfu_A 141 SDSGSVSVEVAAKMALQYWRGR--GL-----------------PG--KRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWT 199 (457)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHTTSCCC--------
T ss_pred eCcHHHHHHHHHHHHHHHHHhc--CC-----------------CC--CceEEEEcCCcCCccHHhhcccCCccccccccc
Confidence 4899999999999999998765 43 35 78999999999999999999965 333444343
Q ss_pred CC-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .+..++|.|...+ ..+ ++++|++.|+++ ++++++||+|| +|+.+|+++++++||++|+++|
T Consensus 200 ~~~~~~~~~~~p~~~~------~~~------d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~ 264 (457)
T 3tfu_A 200 DVLAAQVFAPQVPRDY------DPA------YSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDIC 264 (457)
T ss_dssp --CCCCEEECCCCSSC------CHH------HHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHH
T ss_pred CCCCCceEecCCCccc------CHH------HHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHH
Confidence 32 2344455543111 012 277888888765 46899999999 9999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 265 ~~ 266 (457)
T 3tfu_A 265 RR 266 (457)
T ss_dssp HH
T ss_pred HH
Confidence 84
No 11
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.82 E-value=2.5e-20 Score=154.81 Aligned_cols=129 Identities=24% Similarity=0.202 Sum_probs=92.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
++||||||+.|||+||.++ | |.+||+++++|||.|.+++++++.. .++..+.
T Consensus 128 ~~sGseA~~~Alk~a~~~~-------------------------g--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 180 (451)
T 3oks_A 128 FNSGSEAVENAVKIARSHT-------------------------H--KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFG 180 (451)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCC
T ss_pred eCcHHHHHHHHHHHHHHhc-------------------------C--CCeEEEEcCCcCCccHHHHHhcCCCcccccCCC
Confidence 4899999999999999984 4 7899999999999999999999864 4444444
Q ss_pred CC-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+. .++.++|+|. ++++.. .. ..+.+...+++.+++.|+... .++++++||+||+|+++|++++|++||++|+++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~ 257 (451)
T 3oks_A 181 PFAPEIYRAPLSYPFRDAEF-GK-ELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWC 257 (451)
T ss_dssp SCCSSEEEECCCCHHHHGGG-CT-TTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCcEEeCCCcccccccc-cc-ccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHH
Confidence 43 2444455542 111100 00 011123345666666665432 2368999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 258 ~~ 259 (451)
T 3oks_A 258 RK 259 (451)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 12
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.81 E-value=8.9e-20 Score=151.58 Aligned_cols=132 Identities=22% Similarity=0.265 Sum_probs=99.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.++..+ |. ++ +.+||+++++|||.|.+++++++...++..+.+
T Consensus 117 ~~ggseA~~~al~~~~~~~~~~--g~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 175 (459)
T 4a6r_A 117 TNSGSESVDTMIRMVRRYWDVQ--GK-----------------PE--KKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDL 175 (459)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHSCCTTTC---CC
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCccHHHHhhcCChhhccccCC
Confidence 4799999999999999998765 43 34 789999999999999999999987766555544
Q ss_pred C-CCCCcccCCC-CC-CCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 A-FDWPIASFPK-YK-YPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~-~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
. .+..++|.|. ++ .++ . ..+.+...++++|++.+.+.. ++++++||+||+++.+|++++|++||++|+++|
T Consensus 176 ~~~~~~~~~~p~~~~~~~~-~---d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 249 (459)
T 4a6r_A 176 PIPGMAHIEQPWWYKHGKD-M---TPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPATYWPEIERIC 249 (459)
T ss_dssp SCSSEEEECCCCHHHHCTT-C---CHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCEEeCCCccccCCcc-c---CHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence 3 2444555553 21 111 0 123344556788988887642 368999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 250 ~~ 251 (459)
T 4a6r_A 250 RK 251 (459)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 13
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.80 E-value=1.6e-19 Score=149.46 Aligned_cols=132 Identities=24% Similarity=0.374 Sum_probs=100.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||++.|||++++|+..+ |+ ++ +.+||.++++|||.+.+++++++...++..+.+
T Consensus 113 ~~ggseA~~~al~~~~~~~~~~--g~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 171 (452)
T 3n5m_A 113 SNSGSEANETAFKIARQYYAQK--GE-----------------PH--RYKFMSRYRGYHGNTMATMAATGQAQRRYQYEP 171 (452)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCC
T ss_pred eCchHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCCCHHHHhcCCchhhccccCC
Confidence 4899999999999999987543 32 23 789999999999999999999987665555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc 157 (159)
. .+..++|.|. +++|+.+. .+.+...++++|++.+.+.. .+++++||+||+ |+ +|+++|+++||++|+++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~~l~~~~--~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~ 245 (452)
T 3n5m_A 172 FASGFLHVTPPDCYRMPGIER---ENIYDVECVKEVDRVMTWEL--SETIAAFIMEPIITG-GGILMAPQDYMKAVHETC 245 (452)
T ss_dssp CCSCEEEECCCCTTTSTTTTT---SCGGGCHHHHHHHHHHHHHC--GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHH
T ss_pred CCCCCeEeCCCccccCccCCc---hhhHHHHHHHHHHHHHHhcC--CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHH
Confidence 3 2445566654 45554321 12344556888988887331 358999999999 89 999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 246 ~~ 247 (452)
T 3n5m_A 246 QK 247 (452)
T ss_dssp HH
T ss_pred HH
Confidence 84
No 14
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.80 E-value=1.3e-19 Score=150.10 Aligned_cols=131 Identities=21% Similarity=0.381 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||++.|||+++.++... |. ++ |.+||+++++|||.+.+++++++...++..+.+
T Consensus 110 ~~sGseA~~~al~~~~~~~~~~--G~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 110 SDSGAEAMEIALKMAFQYWKNI--GK-----------------PE--KQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEEC-------------------------
T ss_pred eCchHHHHHHHHHHHHHHHHhh--CC-----------------CC--CCEEEEECCCCCCccHHHHHhcCCccccccccC
Confidence 4899999999999999986554 42 22 789999999999999999999987655555544
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccc-cCCCCccCCHHHHHHHHHHh
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQ-SEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiq-G~gGv~~pp~~fl~~lr~lc 157 (159)
. .++.++|.|+ ++++ ... .+.+...++++|++.|... .+++++||+||++ +.+|+++++++||++|+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~---~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 169 LMFESYKAPIPYVYRSE-SGD---PDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp ----CEEECCCCCTTSS-SCC---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred CCCCceEeCCCccccCC-ccc---hhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 3 3555667765 5554 211 1233445688898888754 4689999999998 99999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 242 ~~ 243 (448)
T 3dod_A 242 TT 243 (448)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 15
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.71 E-value=2.4e-17 Score=136.74 Aligned_cols=135 Identities=27% Similarity=0.293 Sum_probs=91.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhc--CCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCC-cccccc
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQ--RGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHS-KYIHKI 77 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~-~~~~~~ 77 (159)
++||+||++.|+|+||.|+..+. .|. ++..+.+||+++++|||.+.+++++++. +.++..
T Consensus 125 ~~~gseA~~~aik~a~~~~~~~~~~~~~-----------------~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 187 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKSRHNQAHGI-----------------DPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITAR 187 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHTTS-----------------CTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTT
T ss_pred eCchHHHHHHHHHHHHHHhccccccccc-----------------ccCCCCEEEEECCCcCCcccchhhhcCCchhhccc
Confidence 47999999999999998874210 011 1101678999999999999999999985 333333
Q ss_pred CCCCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHH
Q psy4805 78 DIPAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKI 156 (159)
Q Consensus 78 ~~~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~l 156 (159)
+.|.. ++..+|+++. ... ...+ +.+...++++|++.|.++ .+++++||+||+|+.+|+++++++||++|+++
T Consensus 188 ~~~~~~~~~~~~~~d~-~~~--~~~~-~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l 260 (449)
T 2cjg_A 188 FPKFDWPRIDAPYMRP-GLD--EPAM-AALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMREL 260 (449)
T ss_dssp SCCCCCCEECCCCCCT-TCC--HHHH-HHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHH
T ss_pred CCCCCCCcEEEcCCCc-hhh--cccc-chhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHH
Confidence 33321 2223333220 000 0001 122345677888888753 35899999999999999999999999999999
Q ss_pred hcC
Q psy4805 157 GKK 159 (159)
Q Consensus 157 c~~ 159 (159)
|++
T Consensus 261 ~~~ 263 (449)
T 2cjg_A 261 CDE 263 (449)
T ss_dssp HHH
T ss_pred HHH
Confidence 984
No 16
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.53 E-value=1.3e-18 Score=146.06 Aligned_cols=104 Identities=23% Similarity=0.336 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+|||+||||.|||+||.++ | |.+||+|+++|||+|.+++ ++ +. ..
T Consensus 162 ~nSGseA~~~Aik~ar~~t-------------------------g--r~~ii~~~~~yHG~~~~~~--sg-~~-~~---- 206 (465)
T 2yky_A 162 TNSGTEANLMALATATAIT-------------------------G--RKTVLAFDGGYHGGLLNFA--SG-HA-PT---- 206 (465)
Confidence 5899999999999999874 4 7899999999999999888 33 10 00
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+ +|.....+| ++| +++|+++|.++ ++++++||+||+++++|+++++++|+++|+++|++
T Consensus 207 --g---~~~~~~~~~------~~d------~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~ 265 (465)
T 2yky_A 207 --N---APYHVVLGV------YND------VEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASR 265 (465)
Confidence 0 010001111 233 67777787654 36899999999999999999999999999999985
No 17
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.69 E-value=5.9e-17 Score=132.99 Aligned_cols=118 Identities=20% Similarity=0.179 Sum_probs=73.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||++.|+|+||.++ + +.+||+++++|||.+..++..++....... .+
T Consensus 115 ~~sGsea~~~al~~a~~~~-------------------------~--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~-~~ 166 (429)
T 4e77_A 115 VNSGTEATMSAIRLARGYT-------------------------G--RDKIIKFEGCYHGHADCLLVKAGSGALTLG-QP 166 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCC-------------------C
T ss_pred eCcHHHHHHHHHHHHHHhh-------------------------C--CCEEEEEcCccCCCChhhhhhcCCcccccC-CC
Confidence 4899999999999999884 3 679999999999999987766654321110 01
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
... .++.+.. +.....+++| +++|++++.++ ++++++||+||+++++|++.++++|+++|+++|++
T Consensus 167 ~~~--~~~~~~~--~~~~~~~~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~ 232 (429)
T 4e77_A 167 NSP--GVPTDFA--KHTLTCTYND------LASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDE 232 (429)
T ss_dssp CCT--TSCGGGG--TTEEEECTTC------HHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHH
T ss_pred CcC--CCCCccC--CceeecCCCC------HHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 100 0110000 0000111233 67788888764 46899999999999999999999999999999974
No 18
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.68 E-value=8.4e-17 Score=132.14 Aligned_cols=118 Identities=19% Similarity=0.209 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||++.|+|+++.++ + +.+||.++++|||.+..++++++....... .|
T Consensus 117 ~~sGsea~~~ai~~a~~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~-~~ 168 (434)
T 3l44_A 117 VNSGTEAVMTTIRVARAYT-------------------------G--RTKIMKFAGCYHGHSDLVLVAAGSGPSTLG-TP 168 (434)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCCSSGGGGBC-------CC-CB
T ss_pred eCchHHHHHHHHHHHHHhh-------------------------C--CCEEEEEcCccCCCcHHHHhhcCCcccccC-CC
Confidence 4799999999999999884 3 679999999999999999988875321110 01
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ..++.+.. +.....+++| +++|++++.++ ++++++||+||+++.+|+++++++|+++|+++|++
T Consensus 169 ~~--~~~~~~~~--~~~~~~~~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 234 (434)
T 3l44_A 169 DS--AGVPQSIA--QEVITVPFNN------VETLKEALDKW---GHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHE 234 (434)
T ss_dssp SS--TTCCHHHH--TTEEEECTTC------HHHHHHHHHHH---GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHT
T ss_pred Cc--CCCCCcCC--CceEecCccc------HHHHHHHHHhC---CCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHH
Confidence 00 00110000 0000111233 67788888765 35899999999999999999999999999999986
No 19
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.67 E-value=1.9e-16 Score=131.09 Aligned_cols=116 Identities=25% Similarity=0.312 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|++|+|+..+ +|.. +| |.+||.++++|||.+..++++++.+.++..+.|
T Consensus 139 ~~sGseA~~~al~~~~~~~~~~-~g~~----------------~g--~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p 199 (439)
T 2oat_A 139 MNTGVEAGETACKLARKWGYTV-KGIQ----------------KY--KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGP 199 (439)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT-TCCC----------------TT--CCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCS
T ss_pred eCCHHHHHHHHHHHHHHHhhhc-cCCC----------------CC--CCeEEEEcCCCCCCCHhHhhcCCChhcccCCCC
Confidence 4799999999999999875432 1210 24 679999999999999999998875433333333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++..+|+ +| +++|++.++. +++++||+||+++.+|++++|++|+++|+++|++
T Consensus 200 ~~~~v~~~~~-------------~d------~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 255 (439)
T 2oat_A 200 FMPGFDIIPY-------------ND------LPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTR 255 (439)
T ss_dssp CCTTEEEECS-------------SC------HHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCCCeEEeCC-------------CC------HHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 21 1111211 23 5667777641 4799999999999999999999999999999974
No 20
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.67 E-value=1.7e-16 Score=131.11 Aligned_cols=116 Identities=30% Similarity=0.396 Sum_probs=68.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+||+|+..+ +|.. +| |.+||.++++|||.+..++++++...++..+.|
T Consensus 128 ~~sGseA~~~al~~a~~~~~~~-~g~~----------------~g--r~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p 188 (433)
T 1z7d_A 128 MNTGAEANETAYKLCRKWGYEV-KKIP----------------EN--MAKIVVCKNNFSGRTLGCISASTTKKCTSNFGP 188 (433)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT-SCCC----------------TT--CCEEEEETTC-----------------------
T ss_pred eCCHHHHHHHHHHHHHHHhhhc-cCCC----------------CC--CCeEEEEeCCcCCcchhhhcccCCccccccCCC
Confidence 4799999999999999875332 1210 34 689999999999999999888875433333322
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++..+| ++| +++|++.++ .+++++||+||+++++|++++|++|+++|+++|++
T Consensus 189 ~~~~v~~~~-------------~~d------~~~le~~l~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 244 (433)
T 1z7d_A 189 FAPQFSKVP-------------YDD------LEALEEELK-----DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKK 244 (433)
T ss_dssp ---CEEEEC-------------TTC------HHHHHHHHT-----STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCCCeEEeC-------------CCC------HHHHHHHhC-----CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHH
Confidence 21 111111 123 567777774 14799999999999999999999999999999974
No 21
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.66 E-value=1.4e-16 Score=130.84 Aligned_cols=118 Identities=20% Similarity=0.239 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++|||||++.|+|+++.++ + +.+||.++++|||.+.+++++++....... .+
T Consensus 115 ~~~Gsea~~~ai~~a~~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~-~~ 166 (429)
T 3k28_A 115 VNSGTEATMSALRLARGYT-------------------------G--RNKILKFIGCYHGHGDSLLIKAGSGVATLG-LP 166 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------T--CCEEEEEETCCCCSCGGGCSSCCTTC------C
T ss_pred eCChHHHHHHHHHHHHHhh-------------------------C--CCEEEEECCCcCCCcHHHHHhcCCcccccC-CC
Confidence 4799999999999999884 3 678999999999999999888764321110 01
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ..++.+.. +.....+++| +++|++++.++ ++++++||+||+++++|+++++++||++|+++|++
T Consensus 167 ~~--~~~~~~~~--~~~~~~~~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 232 (429)
T 3k28_A 167 DS--PGVPEGVA--KNTITVAYND------LESVKYAFEQF---GDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQ 232 (429)
T ss_dssp CC--TTCCHHHH--TTEEEEETTC------HHHHHHHHHHH---GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHH
T ss_pred Cc--CCCCCccc--CceeecCCCC------HHHHHHHHHhC---CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 00 00110000 0000112233 67788888765 46899999999999999999999999999999974
No 22
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.63 E-value=3.4e-16 Score=128.27 Aligned_cols=117 Identities=21% Similarity=0.264 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+||.++ + +.+||.++++|||.+..++++++........ +
T Consensus 114 ~~ggsea~~~al~~a~~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~ 165 (427)
T 3fq8_A 114 VNSGTEACMAVLRIMRAYT-------------------------G--RDKIIKFEGCYHGHADMFLVKAGSGVATLGL-P 165 (427)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEEETCCCCSCGGGCSSCCTHHHHHTC-C
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEECCCcCCCCHHHHHhcCCcccccCC-C
Confidence 4799999999999999884 3 6789999999999999988887654221110 1
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +......+. ....+++| +++|++.+..+ ++++++||+||+++++|+++++++|+++|+++|++
T Consensus 166 ~~~~~~~~~~~~-----~~~~~~~d------~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~ 231 (427)
T 3fq8_A 166 SSPGVPKKTTAN-----TLTTPYND------LEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLE 231 (427)
T ss_dssp SCSSSCHHHHTT-----EEEEETTC------HHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHH
T ss_pred CCCCCCCcccCc-----eeecCCCC------HHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH
Confidence 10 100000000 00111233 67788888764 46899999999999999999999999999999974
No 23
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.63 E-value=9.1e-16 Score=126.58 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=94.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.|+..+ |. ++ +.+||.++.+|||.+..++++++...++..+.+
T Consensus 116 ~~ggsea~~~al~~~~~~~~~~--g~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 174 (449)
T 3a8u_X 116 TDSGSECALTAVKMVRAYWRLK--GQ-----------------AT--KTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQ 174 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCC
T ss_pred cCcHHHHHHHHHHHHHHHHHhc--CC-----------------CC--CCEEEEECCCcCCCChhhhhccCChhhccccCC
Confidence 4799999999999999987654 43 23 678999999999999999998875544444433
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .+...++.|. ++.++. ... .+.+...++++|++.|.+.. ++++++||+||+++.+|++++|++|+++|+++|+
T Consensus 175 ~~~~~~~v~~~~~~~~~~~-~~d-~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~ 250 (449)
T 3a8u_X 175 PMQDVDHLPHTLLASNAYS-RGM-PKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICN 250 (449)
T ss_dssp CSCSEEEECCCCCGGGTTC-SSS-CSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCCCeEecCCccccCccc-cCC-hHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHH
Confidence 2 2334455442 111100 000 01223445788888887541 2579999999999999999999999999999998
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 251 ~ 251 (449)
T 3a8u_X 251 Q 251 (449)
T ss_dssp H
T ss_pred H
Confidence 4
No 24
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.63 E-value=7.6e-16 Score=126.27 Aligned_cols=124 Identities=19% Similarity=0.343 Sum_probs=76.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.++..+ |. ++ +..||.++.+|||.+.+++++++...++..+.+
T Consensus 95 ~~gg~ea~~~al~~~~~~~~~~--g~-----------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 153 (430)
T 3i4j_A 95 VSGGSEATESAVKLARQYHVER--GE-----------------PG--RFKVITRVPSYHGASLGSLAASGMGARRELYTP 153 (430)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--TC-----------------TT--CCEEEEETTC-----------------------
T ss_pred eCcHHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEEeCCcCCCCcccccccCccccccccCC
Confidence 4799999999999999987654 43 34 789999999999999999998876544433333
Q ss_pred C-C--CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHH
Q psy4805 81 A-F--DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQK 155 (159)
Q Consensus 81 ~-~--~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~ 155 (159)
. . ++.++|+++ +++ ...++++|++.+.+.. ++++++||+||++| .+|+++++++|+++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~------------~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~ 219 (430)
T 3i4j_A 154 LMRPEAWPKLPKPDPARN------------GAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRD 219 (430)
T ss_dssp --CGGGSCEECCCCTTSC------------HHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHH
T ss_pred cCCCCCceEcCCCcccch------------hhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHH
Confidence 2 1 333444432 111 1233677888887641 25899999999999 99999999999999999
Q ss_pred HhcC
Q psy4805 156 IGKK 159 (159)
Q Consensus 156 lc~~ 159 (159)
+|++
T Consensus 220 l~~~ 223 (430)
T 3i4j_A 220 ICDE 223 (430)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 25
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.61 E-value=3.4e-15 Score=122.38 Aligned_cols=126 Identities=26% Similarity=0.256 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.+. + +.+||.++.+|||.+.+++++++... +..+.+
T Consensus 108 ~~gg~ea~~~a~~~~~~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~~-~~~~~~ 159 (433)
T 1zod_A 108 LSTGAESNEAAIRMAKLVT-------------------------G--KYEIVGFAQSWHGMTGAAASATYSAG-RKGVGP 159 (433)
T ss_dssp ESCHHHHHHHHHHHHHHHH-------------------------T--CCEEEEETTCCCCSSHHHHHTCCSSC-CSSSCC
T ss_pred eCchHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCCcCCCChhHHhhcCCcc-ccccCC
Confidence 4799999999999998763 3 56899999999999999999987542 233333
Q ss_pred C-CCCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 A-FDWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~-~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
. .+...++.|. +++++... .+.+...++++|++.+.+.. .+++++||+||+++.+|+++++++|+++|+++|+
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~---~~~~~~~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~ 234 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERN---GAYDYLAELDYAFDLIDRQS--SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCE 234 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEET---TEECHHHHHHHHHHHHHHHC--CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHH
T ss_pred CCCCceEecCCcccccccCCc---hhhhHHHHHHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 2 2334455543 33333210 01112334778888887541 3589999999999999999999999999999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 235 ~ 235 (433)
T 1zod_A 235 A 235 (433)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.61 E-value=1.7e-15 Score=124.42 Aligned_cols=117 Identities=24% Similarity=0.353 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+||.++ + +.+||.++++|||.+.+++++++....... .|
T Consensus 118 ~~sgseA~~~al~~ar~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~-~p 169 (434)
T 2epj_A 118 VNSGTEATMTAIRLARGYT-------------------------G--RDLILKFDGCYHGSHDAVLVAAGSAAAHYG-VP 169 (434)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEEETCCCCSSGGGSEECC------C-EE
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCeEEEEcCCcCCCCHHHHHhcCCCccccC-CC
Confidence 4799999999999999874 2 568999999999999998887764211100 00
Q ss_pred C-CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 A-FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. .+......+. ....+++| +++|++.+.+. ++++++||+||+++.+|++++|++|+++|+++|++
T Consensus 170 ~~~g~~~~~~~~-----~~~~~~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 235 (434)
T 2epj_A 170 TSAGVPEAVARL-----TLVTPYND------VEALERVFAEY---GDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRE 235 (434)
T ss_dssp SSTTCCHHHHTT-----EEEEETTC------HHHHHHHHHHH---GGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCc-----eEecCCCC------HHHHHHHHHhC---CCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHH
Confidence 0 0100000000 00011223 66788888754 35899999999999999999999999999999984
No 27
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.59 E-value=2.6e-15 Score=123.30 Aligned_cols=113 Identities=28% Similarity=0.352 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+++.|+..+ |. +| +.+||+++.+|||.+..++++++...++..+.|
T Consensus 120 ~~ggteA~~~al~~~~~~~~~~--~~-----------------~g--~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p 178 (420)
T 2pb2_A 120 MNSGTEANETAFKLARHYACVR--HS-----------------PF--KTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGP 178 (420)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSS
T ss_pred eCCHHHHHHHHHHHHHHHhhhc--cC-----------------CC--CCEEEEEeCCcCCcCHHHHHhcCCccccccCCC
Confidence 4799999999999999887554 32 34 678999999999999999988875433333333
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++..+| ++| +++|++.+. +++++||+||+++.+|+++++++++++|+++|++
T Consensus 179 ~~~~~~~~~-------------~~d------~~~le~~i~------~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~ 233 (420)
T 2pb2_A 179 KPADIIHVP-------------FND------LHAVKAVMD------DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE 233 (420)
T ss_dssp CCSCEEEEC-------------TTC------HHHHHHHCC------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CCCCeEEec-------------CCC------HHHHHHHhc------cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHH
Confidence 21 111111 122 566666653 3799999999999999999999999999999974
No 28
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.59 E-value=2.5e-15 Score=123.44 Aligned_cols=121 Identities=21% Similarity=0.315 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcc--ccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKY--IHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~--~~~~~ 78 (159)
++||+||++.|+|++|.++ + +.+||.++.+|||.+..++++++... ++..+
T Consensus 110 ~~ggsea~~~al~~~~~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 162 (439)
T 3dxv_A 110 GHSGSDANEAAYRAIVKAT-------------------------G--RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKA 162 (439)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------S--CCEEEEETTCCCCSSHHHHCC------------
T ss_pred eCCHHHHHHHHHHHHHHHh-------------------------C--CCEEEEECCCCCCCcHHHHhhcCCCchhhcccc
Confidence 4799999999999999874 2 56899999999999999999987643 44333
Q ss_pred CCCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 79 IPAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 79 ~~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
.+.. ++..+|+++. .. + .....++++|++.+.+. ..+++++||+||+++++|++.++++|+++|+++|
T Consensus 163 ~~~~~~~~~~~~~~~---~~-----~-~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~ 231 (439)
T 3dxv_A 163 DGLILLPYPDPYRPY---RN-----D-PTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADIC 231 (439)
T ss_dssp -CEEEECCCCSSSCB---TT-----B-TTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHH
T ss_pred CCCCCCcEEcCCCcc---cc-----c-ccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 3321 2233444321 00 0 00111477888888522 1468999999999999999999999999999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 232 ~~ 233 (439)
T 3dxv_A 232 RA 233 (439)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 29
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.56 E-value=7e-15 Score=119.01 Aligned_cols=112 Identities=33% Similarity=0.457 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+++++.++..+ | ++ +.+||.++.+|||.+..++++++...++..+.+
T Consensus 99 ~~gg~ea~~~al~~~~~~~~~~--g------------------~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 3nx3_A 99 TNSGTESIEGAMKTARKYAFNK--G------------------VK--GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKP 156 (395)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT--T------------------CT--TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCS
T ss_pred eCCHHHHHHHHHHHHHHHhhcc--C------------------CC--CCEEEEEcCCcCCCCHHHHhhcCCcccccccCC
Confidence 4799999999999999887554 3 13 779999999999999999999886544433322
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +...+| ++| +++|++.+. +++++||+||+++++|.++++++|+++|+++|++
T Consensus 157 ~~~~~~~~~-------------~~d------~~~l~~~l~------~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~ 211 (395)
T 3nx3_A 157 LISGVKFAK-------------YND------ISSVEKLVN------EKTCAIILESVQGEGGINPANKDFYKALRKLCDE 211 (395)
T ss_dssp CCSCEEEEC-------------TTC------HHHHHTTCC------TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHH
T ss_pred CCCCcEEeC-------------CCC------HHHHHHhcc------CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 11 111111 123 566666552 4789999999999999999999999999999974
No 30
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.54 E-value=2.8e-14 Score=116.83 Aligned_cols=115 Identities=20% Similarity=0.313 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+|+||.++ + +.+||.++.+|||.+.+++++++...... ..|
T Consensus 114 ~~~g~ea~~~al~~ar~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~-~~p 165 (424)
T 2e7u_A 114 VNSGTEATMSALRLARGYT-------------------------G--RPYIVKFRGNYHGHADGLLVEAGSGALTL-GVP 165 (424)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------C--CCEEEEETTCCCCCCGGGSEECCSSSCCB-CEE
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEECCCcCCCcHHHHHhcCCccccc-CCC
Confidence 4799999999999999884 2 56899999999999998888776431110 001
Q ss_pred CC-CCCcccCCC-CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AF-DWPIASFPK-YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~-~~~~~p~p~-~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.. +......+. +..| ++| +++|++.+.+. ++++++||+||+++++|++++|++|+++|+++ +
T Consensus 166 ~~~g~~~~~~~~~~~~~------~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~ 229 (424)
T 2e7u_A 166 SSAGVPEEYAKLTLVLE------YND------PEGLREVLKRR---GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-K 229 (424)
T ss_dssp SSTTCCHHHHTTEEEEC------TTC------HHHHHHHHHHH---GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-G
T ss_pred CCCCCCCccCCceEeCC------CCC------HHHHHHHHHhC---CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-H
Confidence 00 100000000 0111 223 66777777754 25799999999999999999999999999999 7
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 230 ~ 230 (424)
T 2e7u_A 230 A 230 (424)
T ss_dssp G
T ss_pred H
Confidence 4
No 31
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.49 E-value=2e-14 Score=118.76 Aligned_cols=115 Identities=18% Similarity=0.220 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+++||.++ + +.+||.++.+|||.+..++++++.. +.. +
T Consensus 119 ~~gg~eA~~~al~~ar~~~-------------------------~--~~~vi~~~~~yhg~~~~~~~~~~~~-~~~---~ 167 (453)
T 2cy8_A 119 TGSGTETTLLALRVARAFT-------------------------G--RRMILRFEGHYHGWHDFSASGYNSH-FDG---Q 167 (453)
T ss_dssp ESCHHHHHHHHHHHHHHHH-------------------------C--CCEEEEECC------------------------
T ss_pred eCCHHHHHHHHHHHHHHhh-------------------------C--CCEEEEEcCCcCCCchhhHhhcCCc-cCC---C
Confidence 4799999999999999874 2 5689999999999999887766531 000 0
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ..+|.+.. +.....+++| +++|++.|.+. ++++++||+||+++.+|+++++++|+++|+++|++
T Consensus 168 ~~--~g~~~~~~--~~~~~~~~~d------~~~le~~l~~~---~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~ 233 (453)
T 2cy8_A 168 PA--PGVLPETT--ANTLLIRPDD------IEGMREVFANH---GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQ 233 (453)
T ss_dssp ----------CG--GGEEEECTTC------HHHHHHHHHHH---GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHH
T ss_pred cC--CCCCcccc--CceeecCCCC------HHHHHHHHHhc---CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 00 00110000 0000001223 66788888754 35899999999999999999999999999999974
No 32
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.45 E-value=8.5e-13 Score=108.04 Aligned_cols=124 Identities=23% Similarity=0.389 Sum_probs=87.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCcc-ccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKY-IHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~-~~~~~~ 79 (159)
+++|+||++.|+++++.++..+ |+ ++.+||.++.+|||.+..++++++... ++..+.
T Consensus 109 ~~ggtea~~~ai~~~~~~~~~~--g~--------------------~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 166 (429)
T 1s0a_A 109 ADSGSVAVEVAMKMALQYWQAK--GE--------------------ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWK 166 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH--TC--------------------CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGT
T ss_pred eCCHHHHHHHHHHHHHHHhccc--CC--------------------CCCeEEEECCCCCCCchhhhhhcCCchhhccccc
Confidence 4799999999999998876433 32 256899999999999999998887432 222332
Q ss_pred CC-CCCCcccCCCCC--CCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHH
Q psy4805 80 PA-FDWPIASFPKYK--YPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQK 155 (159)
Q Consensus 80 ~~-~~~~~~p~p~~~--~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~ 155 (159)
+. .+...+|.|... ..+. ..| +++|++.+.+. .+++++||+||+ ++.+|+++++++|+++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~----~~d------~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~ 233 (429)
T 1s0a_A 167 GYLPENLFAPAPQSRMDGEWD----ERD------MVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK 233 (429)
T ss_dssp TTSCCCEEECCCCSBC-CCCC----GGG------GHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred CCCCCceEeCCCcccccccch----HHH------HHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 22 123344444210 0010 012 56777777653 357999999999 9999999999999999999
Q ss_pred HhcC
Q psy4805 156 IGKK 159 (159)
Q Consensus 156 lc~~ 159 (159)
+|++
T Consensus 234 l~~~ 237 (429)
T 1s0a_A 234 ICDR 237 (429)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 33
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.44 E-value=3.8e-13 Score=110.13 Aligned_cols=129 Identities=33% Similarity=0.414 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+++|+||++.|+++++.++ +.+||.++.+|||.+..++++++.. .++..+.
T Consensus 110 ~~gg~ea~~~ai~~~~~~~----------------------------~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~ 161 (419)
T 2eo5_A 110 SNSGTEAIEASIKVVKNTG----------------------------RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVG 161 (419)
T ss_dssp ESSHHHHHHHHHHHHHTTS----------------------------CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSC
T ss_pred eCchHHHHHHHHHHHHHhh----------------------------CCcEEEECCCcCCCCHhhHhhcCCccccccccC
Confidence 4789999999999987651 4589999999999999999998754 3333333
Q ss_pred CC-CCCCcccCCC-CCCCCccchhh-h-hHHHHHHHHHHH-HHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHH
Q psy4805 80 PA-FDWPIASFPK-YKYPLEENERE-N-KAEDEKCLAEVE-DLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQ 154 (159)
Q Consensus 80 ~~-~~~~~~p~p~-~~~~~~~~~~~-~-~~~~~~~~~~le-~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr 154 (159)
+. .++..+|.++ ++.++...... + +.+. .++++|+ +.+.+.. +++++++||+||+++.+|+++++++|+++|+
T Consensus 162 ~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~-~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~ 239 (419)
T 2eo5_A 162 PFMPGVIHVPYPNPYRNPWHINGYENPSELVN-RVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQ 239 (419)
T ss_dssp CCCTTEEEECCCCSSSCTTCCCTTTCHHHHHH-HHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred CCCCCCEEECCCccccccccccccccchhhHH-HHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCCccCCHHHHHHHH
Confidence 32 1334455543 33222100000 0 0111 3467788 7776421 1247899999999999999999999999999
Q ss_pred HHhcC
Q psy4805 155 KIGKK 159 (159)
Q Consensus 155 ~lc~~ 159 (159)
++|++
T Consensus 240 ~l~~~ 244 (419)
T 2eo5_A 240 KLAKK 244 (419)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 34
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.37 E-value=3.4e-12 Score=102.92 Aligned_cols=116 Identities=26% Similarity=0.346 Sum_probs=84.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+++++.++... +|.+ +| +.+||++..+|||.+.+++++++...++..+.+
T Consensus 99 ~~~gt~a~~~al~~~~~~~~~~-~~~~----------------~~--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 3ruy_A 99 MNTGAEAVETAIKTARRWAYDV-KKVE----------------AN--RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGP 159 (392)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHT-SCCC----------------TT--CCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCS
T ss_pred eCcHHHHHHHHHHHHHHhhhhc-cCCC----------------CC--CcEEEEEcCCcCCCCHhhhhccCChhhccccCC
Confidence 4799999999999998774322 1321 23 679999999999999999999876544433322
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
... ..... +++| +++|++.+. .++++|++||+++..|++.++++|+++|.++|++
T Consensus 160 ~~~-~~~~~-----------~~~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~ 214 (392)
T 3ruy_A 160 MLP-GIIVI-----------PYGD------LEALKAAIT------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKK 214 (392)
T ss_dssp CCS-SEEEE-----------CTTC------HHHHHHHCC------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHT
T ss_pred CCC-CCeee-----------Cccc------HHHHHHHhc------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 210 00011 1123 566666653 4799999999999999999999999999999985
No 35
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.32 E-value=4.3e-12 Score=102.51 Aligned_cols=113 Identities=32% Similarity=0.399 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|+++++.++..+ |. +| +..||.++.+|||.+..++.+++...++..+.+
T Consensus 102 ~~gg~~a~~~al~~~~~~~~~~--~~-----------------~g--~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T 4adb_A 102 CNSGAEANEAALKLARKFAHDR--YG-----------------SH--KSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP 160 (406)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH--TC-----------------TT--CCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCS
T ss_pred eCcHHHHHHHHHHHHHHHHHhc--CC-----------------CC--CcEEEEECCCcCCCcHHHhhccCCccccccCCC
Confidence 4799999999999999876554 32 34 679999999999999999998876544333322
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. +...+| ++| +++|++.+. +++++||+||+++.||+++++++++++|.++|++
T Consensus 161 ~~~~~~~~~-------------~~d------~~~l~~~l~------~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~ 215 (406)
T 4adb_A 161 LPADIRHAA-------------YND------INSASALID------DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNR 215 (406)
T ss_dssp CCSSEEEEC-------------TTC------HHHHHTTCS------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CCCCceEeC-------------CCc------HHHHHHHhc------CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 11 111111 123 556665543 4799999999999999999999999999999974
No 36
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.22 E-value=9e-11 Score=95.41 Aligned_cols=122 Identities=27% Similarity=0.306 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCc-cccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSK-YIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~-~~~~~~~ 79 (159)
+++|+||++.|+++||.+. + +.+||.++.+|||.+..++.+++.. .++..+.
T Consensus 108 ~~g~~~a~~~~~~~a~~~~-------------------------~--~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~ 160 (426)
T 1sff_A 108 VTTGSEAVENAVKIARAAT-------------------------K--RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMG 160 (426)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------T--CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSC
T ss_pred eCchHHHHHHHHHHHHHhh-------------------------C--CCeEEEECCCcCCCchHhhhhcCCccccccccC
Confidence 4799999999999998774 1 3389999999999998888887643 1222222
Q ss_pred CCC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+.. ++..+|.+. .+. + ....-.+++|++.+.... .+.++++||+||++++.|++.+|++|+++|.++|+
T Consensus 161 ~~~~~v~~v~~~~---~~~-----~-~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~ 230 (426)
T 1sff_A 161 LMPGHVYRALYPC---PLH-----G-ISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCD 230 (426)
T ss_dssp CCCSSEEEECCCB---GGG-----T-BCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHH
T ss_pred CCCCCcEEeCCCc---ccc-----c-cchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHH
Confidence 211 122234321 000 0 001122677777776421 12478999999999999989999999999999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 231 ~ 231 (426)
T 1sff_A 231 E 231 (426)
T ss_dssp H
T ss_pred H
Confidence 4
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.03 E-value=4.5e-10 Score=90.67 Aligned_cols=112 Identities=27% Similarity=0.364 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|++.++.+.... . +| +..||.++.+|||.+..++.+++....+..+.|
T Consensus 103 ~~gg~~a~~~al~~~~~~~~~~---~-----------------~~--~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p 160 (397)
T 2ord_A 103 ANTGTEANEAAIKIARKYGKKK---S-----------------EK--KYRILSAHNSFHGRTLGSLTATGQPKYQKPFEP 160 (397)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH---C-----------------TT--CCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCS
T ss_pred eCCHHHHHHHHHHHHHHHhhcC---C-----------------CC--CceEEEEcCCcCCCchhhhhccCChhhccccCC
Confidence 4799999999999988764321 1 23 567999999999999877777764322222222
Q ss_pred CC-CCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AF-DWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~-~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ++..+| .+| +++|++.+. +++++|++||+++..|+++++.+++++|.++|++
T Consensus 161 ~~~~~~~~~-------------~~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~ 215 (397)
T 2ord_A 161 LVPGFEYFE-------------FNN------VEDLRRKMS------EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDE 215 (397)
T ss_dssp CCTTEEEEC-------------TTC------HHHHHHHCC------TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHH
T ss_pred CCCCeeEec-------------CCC------HHHHHHHhh------cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 21 111111 122 556666653 3789999999999999988899999999999974
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.98 E-value=1.4e-09 Score=87.71 Aligned_cols=108 Identities=25% Similarity=0.418 Sum_probs=75.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||+||++.|++.++.+. . +..||.+..+|||.+..++.+++....+..+.|
T Consensus 110 ~~gg~~a~~~al~~~~~~~-------------------------~--~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p 162 (395)
T 1vef_A 110 VNSGTEANEAALKFARAHT-------------------------G--RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLP 162 (395)
T ss_dssp ESSHHHHHHHHHHHHHHHH-------------------------S--CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCS
T ss_pred cCcHHHHHHHHHHHHHHHh-------------------------C--CCeEEEEcCCcCCCchhhhhhcCCcccccccCC
Confidence 4789999999999887653 1 457999999999999888777664322111222
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
... .....| ..+ +++|++.+. +++++|+++|+++..|.+.++++++++|.++|++
T Consensus 163 ~~~-~~~~~~-----------~~d------~~~l~~~i~------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~ 217 (395)
T 1vef_A 163 LVE-PVEFIP-----------YND------VEALKRAVD------EETAAVILEPVQGEGGVRPATPEFLRAAREITQE 217 (395)
T ss_dssp CSS-CEEEEC-----------TTC------HHHHHHHCC------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CCC-CeeEeC-----------CCc------HHHHHHHhc------cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHH
Confidence 110 000111 112 556666653 3689999999999899999999999999999974
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.94 E-value=2.1e-09 Score=85.81 Aligned_cols=113 Identities=35% Similarity=0.451 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.|++++|.+..+ +. +| +.+||....+||+....++.+++.......+.+
T Consensus 92 ~~g~t~a~~~~~~~~~~~~~~---~~-----------------~g--~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 2eh6_A 92 ANSGTESVEAAIKLARKYWRD---KG-----------------KN--KWKFISFENSFHGRTYGSLSATGQPKFHKGFEP 149 (375)
T ss_dssp ESSHHHHHHHHHHHHHHHHHH---TT-----------------CC--CCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCS
T ss_pred eCchHHHHHHHHHHHHHHhcc---CC-----------------CC--CCEEEEECCCcCCCchhhhhhcCCccccCCCCC
Confidence 479999999999988766421 11 34 578999999999999888777654322111111
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.. ......| ..| +++|++.+. +++.+|+++|.++..|++.++++++++|.++|++
T Consensus 150 ~~-~~~~~~~-----------~~d------~~~l~~~l~------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~ 204 (375)
T 2eh6_A 150 LV-PGFSYAK-----------LND------IDSVYKLLD------EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKE 204 (375)
T ss_dssp CC-SSEEEEC-----------TTC------HHHHHTTCC------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CC-CCceeCC-----------Cch------HHHHHHHhc------CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 10 0001111 112 455655542 3789999999999999998999999999999974
No 40
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.44 E-value=4.8e-07 Score=74.30 Aligned_cols=120 Identities=15% Similarity=0.074 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCC-ceEEEEcCCCCccchhhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPN-LSILSFKGAFHGRTLGCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r-~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~ 79 (159)
++|||||++.|+++++..+... +|. . | ..||.. .||+.|..+..............
T Consensus 95 t~~gt~A~~~al~~~~~~~~~~-~G~------------------~--~~d~Ii~~--~~h~~t~~~~~~~~~~~~~~~~~ 151 (467)
T 2oqx_A 95 THQGRGAEQIYIPVLIKKREQE-KGL------------------D--RSKMVAFS--NYFFDTTQGHSQINGCTVRNVYI 151 (467)
T ss_dssp EC--CCSHHHHHHHHHHHHHHH-HCC------------------C--TTTCEEEE--SSCCHHHHHHHHHTTCEEEECBC
T ss_pred cCCcHHHHHHHHHHHhcccccc-CCC------------------C--ccceEEec--ccccccchhhhhccCcceeeccc
Confidence 4789999999999998652111 021 1 2 456665 69988765544322111000000
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
. ..++. ....+.... .| +++|++.|.... .+++++||+||+++.+|..+++.+++++|+++|++
T Consensus 152 ~----~~~~~-~~~~~~~~~---~d------~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 152 K----EAFDT-GVRYDFKGN---FD------LEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp T----TTTCT-TSCCTTTTC---BC------HHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred c----ccccC-CCCCCccCC---cC------HHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 0 00110 000111000 12 677888887531 14789999999998864467889999999999985
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.41 E-value=2.5e-07 Score=75.28 Aligned_cols=101 Identities=12% Similarity=-0.018 Sum_probs=68.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|+||++.|++.++. + ..+||.+..+||+.+..+.......
T Consensus 125 ~~g~~ea~~~a~~~~~~--------------------------~---gd~Vi~~~~~y~~~~~~~~~~g~~~-------- 167 (421)
T 3l8a_A 125 IDGVVPAISIALQAFSE--------------------------K---GDAVLINSPVYYPFARTIRLNDHRL-------- 167 (421)
T ss_dssp ESCHHHHHHHHHHHHSC--------------------------T---EEEEEEEESCCHHHHHHHHHTTEEE--------
T ss_pred cCCHHHHHHHHHHHhcC--------------------------C---CCEEEECCCCcHHHHHHHHHCCCEE--------
Confidence 47899999999997621 1 4689999999999876554432210
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+|.......+ . .| +++|++.+.+ .++++||+|++++.+| +++|++++++|+++|++
T Consensus 168 ----~~~~~~~~~~~~--~---~d------~~~le~~i~~-----~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~ 225 (421)
T 3l8a_A 168 ----VENSLQIINGRF--E---ID------FEQLEKDIID-----NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKK 225 (421)
T ss_dssp ----EEEECEEETTEE--E---CC------HHHHHHHHHH-----TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHH
T ss_pred ----EeccccccCCCe--e---eC------HHHHHHHhhc-----cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHH
Confidence 112221000000 0 12 5677777764 3789999999999999 56788889999999974
No 42
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.36 E-value=1.7e-06 Score=70.97 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.... .+++++||+||+++.+|.++++.+++++|+++|++
T Consensus 169 ~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~ 215 (467)
T 1ax4_A 169 IKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQ 215 (467)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHH
Confidence 567788887541 24799999999998875567889999999999984
No 43
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=97.93 E-value=1.9e-05 Score=64.36 Aligned_cols=93 Identities=16% Similarity=0.252 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.|++.. + + +...|.+...+|+....++..++..
T Consensus 130 ~~sGs~a~~~al~~l---~-----~----------------------~gd~vl~~~~~h~~~~~~~~~~g~~-------- 171 (427)
T 2w8t_A 130 FSTGYMANLGIISTL---A-----G----------------------KGEYVILDADSHASIYDGCQQGNAE-------- 171 (427)
T ss_dssp ESCHHHHHHHHHHHH---S-----C----------------------TTCEEEEETTCCHHHHHHHHHSCSE--------
T ss_pred ecCcHHHHHHHHHHh---c-----C----------------------CCCEEEECCcccHHHHHHHHHcCCe--------
Confidence 378999999988763 1 1 2235556778888887766655421
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++|. ++ +++|++.+.... ..++++||+||+++..|.+.+ +++|+++|++
T Consensus 172 -----~~~~~~-----------~d------~~~le~~l~~~~--~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~ 222 (427)
T 2w8t_A 172 -----IVRFRH-----------NS------VEDLDKRLGRLP--KEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKK 222 (427)
T ss_dssp -----EEEECT-----------TC------HHHHHHHHHTSC--SSSCEEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred -----eEEeCC-----------CC------HHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC----HHHHHHHHHH
Confidence 112221 12 567777877531 127899999999998998765 8999999974
No 44
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=97.81 E-value=5.5e-05 Score=60.95 Aligned_cols=89 Identities=19% Similarity=0.116 Sum_probs=62.2
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+||++|++.|++... + +...|.+...+|+.+..++.+.+..
T Consensus 126 ~sGt~a~~~~l~~~~----------------------------~--~gd~Vl~~~~~~~~~~~~~~~~g~~--------- 166 (409)
T 3kki_A 126 QSGWNANVGLLQTIC----------------------------Q--PNTNVYIDFFAHMSLWEGARYANAQ--------- 166 (409)
T ss_dssp SCHHHHHHHHHHHHC----------------------------C--TTCEEEEETTSCHHHHHHHHHTTCE---------
T ss_pred cchHHHHHHHHHHhc----------------------------C--CCCEEEECCCcCHHHHHHHHHcCCe---------
Confidence 689999999988441 1 2245557788888887777665422
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++++. +| +++|++.+... +.++||+|++++..|.+.+ +++|+++|++
T Consensus 167 ----~~~~~~-----------~d------~~~le~~l~~~-----~~~~vi~~~~~nptG~~~~----l~~l~~la~~ 214 (409)
T 3kki_A 167 ----AHPFMH-----------NN------CDHLRMLIQRH-----GPGIIVVDSIYSTLGTIAP----LAELVNISKE 214 (409)
T ss_dssp ----EEEECT-----------TC------HHHHHHHHHHH-----CSCEEEEESBCTTTCCBCC----HHHHHHHHHH
T ss_pred ----EEEecC-----------CC------HHHHHHHHHhc-----CCeEEEECCCCCCCCCcCC----HHHHHHHHHH
Confidence 112221 12 56777888753 3489999999999898766 9999999974
No 45
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.65 E-value=9.3e-05 Score=60.46 Aligned_cols=105 Identities=11% Similarity=0.133 Sum_probs=67.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.|++.+. + +| . |....+||+.+..++...|....
T Consensus 96 ~~~gt~a~~~al~~l~--------~------------------~g--d---i~~~~~~~~~~~~~~~~~G~~~~------ 138 (456)
T 2ez2_A 96 THQGRGAENLLSQLAI--------K------------------PG--Q---YVAGNMYFTTTRYHQEKNGAVFV------ 138 (456)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------TT--C---EEEESSCCHHHHHHHHHTTCEEE------
T ss_pred eCCcHHHHHHHHHHhC--------C------------------CC--C---EeccccccchhHHHHHHcCCEEE------
Confidence 4789999999998761 1 34 3 77788999998777766653211
Q ss_pred CCCCCcccC-----CCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHH
Q psy4805 81 AFDWPIASF-----PKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQ 154 (159)
Q Consensus 81 ~~~~~~~p~-----p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr 154 (159)
.++. |....++... .| +++|++.+.... ...+++|+++ |.++..|+ +.+.+++++|.
T Consensus 139 -----~v~~~~~~~~~~~~~~~~~---~d------~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~ 201 (456)
T 2ez2_A 139 -----DIVRDEAHDAGLNIAFKGD---ID------LKKLQKLIDEKG--AENIAYICLAVTVNLAGGQ-PVSMANMRAVR 201 (456)
T ss_dssp -----ECBCGGGGCTTCCCSCTTC---BC------HHHHHHHHHHHC--GGGEEEEEEESSBTTTTSB-CCCHHHHHHHH
T ss_pred -----EecccccccccccccccCC---CC------HHHHHHHHHhcc--ccceeEEEEeccCCCCCCc-cCCHHHHHHHH
Confidence 0111 0000011000 12 567777776531 2458999999 67767785 67899999999
Q ss_pred HHhcC
Q psy4805 155 KIGKK 159 (159)
Q Consensus 155 ~lc~~ 159 (159)
++|++
T Consensus 202 ~la~~ 206 (456)
T 2ez2_A 202 ELTEA 206 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 46
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.64 E-value=0.00015 Score=57.60 Aligned_cols=91 Identities=16% Similarity=0.255 Sum_probs=61.8
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+|||+|++.|++.. . + +..+|.+...+|+.+..++...|..
T Consensus 106 ~sGt~a~~~~~~~~---~-----~----------------------~gd~v~~~~~~~~~~~~~~~~~g~~--------- 146 (384)
T 1bs0_A 106 ISGFAANQAVIAAM---M-----A----------------------KEDRIAADRLSHASLLEAASLSPSQ--------- 146 (384)
T ss_dssp SCHHHHHHHHHHHH---C-----C----------------------TTCEEEEETTCCHHHHHHHHTSSSE---------
T ss_pred CCcHHHHHHHHHHh---C-----C----------------------CCcEEEEcccccHHHHHHHHHcCCC---------
Confidence 68999999998753 1 1 2346677888999888777665422
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..|. .| .++|++.+... ....++|++++.+...|.+.+ +++|.++|++
T Consensus 147 ----~~~~~~-----------~d------~~~l~~~l~~~---~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 196 (384)
T 1bs0_A 147 ----LRRFAH-----------ND------VTHLARLLASP---CPGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQ 196 (384)
T ss_dssp ----EEEECT-----------TC------HHHHHHHHHSC---CSSCEEEEEESBCTTTCCBCC----HHHHHHHHHH
T ss_pred ----EEEeCC-----------CC------HHHHHHHHHhc---CCCCeEEEEeCCCCCCCCccC----HHHHHHHHHH
Confidence 111221 12 45677777642 224789999999998898775 7899999974
No 47
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=97.61 E-value=9.8e-05 Score=57.76 Aligned_cols=102 Identities=12% Similarity=0.092 Sum_probs=64.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh-hhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG-CLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g-a~s~s~~~~~~~~~~ 79 (159)
+++|++|++.|++.++. + ..+||....+||+.... .+...|.
T Consensus 72 ~~g~t~a~~~~~~~~~~--------------------------~---gd~vl~~~~~~~~~~~~~~~~~~g~-------- 114 (359)
T 1svv_A 72 ISGGTQTNLIACSLALR--------------------------P---WEAVIATQLGHISTHETGAIEATGH-------- 114 (359)
T ss_dssp ESCHHHHHHHHHHHHCC--------------------------T---TEEEEEETTSHHHHSSTTHHHHTTC--------
T ss_pred eCCchHHHHHHHHHHhC--------------------------C---CCEEEEcccchHHHHHHHHHhcCCC--------
Confidence 47899999999987731 1 45899999999987653 1222221
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhc-cCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYN-KKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~-~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+..+|..+ +. .+ +++|++.+.... ..+.++.+|++++. +..|.+. |++++++|.++|+
T Consensus 115 ---~~~~v~~~~----~~-----~d------~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~-~~~~l~~i~~~~~ 174 (359)
T 1svv_A 115 ---KVVTAPCPD----GK-----LR------VADIESALHENRSEHMVIPKLVYISNT-TEVGTQY-TKQELEDISASCK 174 (359)
T ss_dssp ---CEEEECCTT----SC-----CC------HHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC-CHHHHHHHHHHHH
T ss_pred ---eeEEEeCCC----Ce-----ec------HHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec-CHHHHHHHHHHHH
Confidence 112223211 10 12 566777776520 01235889999987 5678755 4799999999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 175 ~ 175 (359)
T 1svv_A 175 E 175 (359)
T ss_dssp H
T ss_pred H
Confidence 4
No 48
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=97.53 E-value=0.00012 Score=58.28 Aligned_cols=94 Identities=12% Similarity=0.190 Sum_probs=60.3
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+|||+|++.+++... + +...|.+...+|+.+..++.+.+...
T Consensus 110 ~sGt~a~~~~l~~~~--------~----------------------~gd~v~~~~~~~~~~~~~~~~~g~~~-------- 151 (399)
T 3tqx_A 110 SSCFDANGGLFETLL--------G----------------------PEDAIISDELNHASIIDGIRLCKAQR-------- 151 (399)
T ss_dssp SCHHHHHHTTHHHHC--------C----------------------TTCEEEEETTCCHHHHHHHHSCCSEE--------
T ss_pred CchHHHHHHHHHHhc--------C----------------------CCCEEEECCcccHHHHHHHHHcCCce--------
Confidence 588999998886431 1 22455667778888777666655321
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|. .+ .+++++.+......+.++++|+++++++..|.+.+ +++|.++|++
T Consensus 152 -----~~~~~-----------~d------~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 203 (399)
T 3tqx_A 152 -----YRYKN-----------NA------MGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADK 203 (399)
T ss_dssp -----EEECT-----------TC------TTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred -----eEeCC-----------CC------HHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHH
Confidence 11221 01 23455556554211237999999999999998766 8999999974
No 49
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=97.52 E-value=9.5e-05 Score=59.48 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhc--CCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLST--THSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~--s~~~~~~~~~ 78 (159)
+++|++|++.|++..+.++. + ++..||....+||+.......+ .+..
T Consensus 91 ~~ggt~a~~~a~~~l~~~~~----~---------------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~------ 139 (423)
T 3lvm_A 91 TSGATESDNLAIKGAANFYQ----K---------------------KGKHIITSKTEHKAVLDTCRQLEREGFE------ 139 (423)
T ss_dssp ESSHHHHHHHHHHHHHHHHT----T---------------------TCCEEEEETTSCHHHHHHHHHHHHTTCE------
T ss_pred eCChHHHHHHHHHHHHHhhc----c---------------------CCCEEEECCccchHHHHHHHHHHHcCCE------
Confidence 47899999999997776541 1 1468999999999876444332 1211
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... ... .| +++|++.+. .++++|+++++++..|.+.+ +++|.++|+
T Consensus 140 -----~~~v~~~~-~~~-------~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~ 190 (423)
T 3lvm_A 140 -----VTYLAPQR-NGI-------ID------LKELEAAMR------DDTILVSIMHVNNEIGVVQD----IAAIGEMCR 190 (423)
T ss_dssp -----EEEECCCT-TSC-------CC------HHHHHHHCC------TTEEEEECCSBCTTTCBBCC----HHHHHHHHH
T ss_pred -----EEEeccCC-CCc-------cC------HHHHHHhcC------CCcEEEEEeCCCCCCccccC----HHHHHHHHH
Confidence 11222211 000 12 456666653 36899999999998998766 888999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 191 ~ 191 (423)
T 3lvm_A 191 A 191 (423)
T ss_dssp H
T ss_pred H
Confidence 4
No 50
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=97.52 E-value=6.2e-05 Score=59.92 Aligned_cols=102 Identities=5% Similarity=-0.052 Sum_probs=63.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++.++++. . . + +.+||....+|||.......+......
T Consensus 91 ~~g~t~a~~~~~~~~~~~~-~---~------------------~---gd~vl~~~~~~~~~~~~~~~~~~~~g~------ 139 (406)
T 1kmj_A 91 VRGTTEGINLVANSWGNSN-V---R------------------A---GDNIIISQMEHHANIVPWQMLCARVGA------ 139 (406)
T ss_dssp ESSHHHHHHHHHHHTHHHH-C---C------------------T---TCEEEEETTCCGGGTHHHHHHHHHHTC------
T ss_pred eCChhHHHHHHHHHhhhhc-C---C------------------C---CCEEEEecccchHHHHHHHHHHHhCCC------
Confidence 3688999999999886542 1 1 1 468999999999986543222110000
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.... .. .+ +++|++.+. .++.+|++++++...|.+.+ +++|.++|++
T Consensus 140 --~~~~~~~~~~---~~-----~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 192 (406)
T 1kmj_A 140 --ELRVIPLNPD---GT-----LQ------LETLPTLFD------EKTRLLAITHVSNVLGTENP----LAEMITLAHQ 192 (406)
T ss_dssp --EEEEECBCTT---SC-----BC------GGGHHHHCC------TTEEEEEEESBCTTTCCBCC----HHHHHHHHHH
T ss_pred --EEEEEecCCC---CC-----cC------HHHHHHHhc------cCCeEEEEeCCCccccCcCC----HHHHHHHHHH
Confidence 0112222110 00 11 344555542 36899999999998898776 8999999974
No 51
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=97.52 E-value=5.8e-05 Score=61.11 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.|++... + + ..+||+....|||.......+.... +
T Consensus 87 ~~sGt~A~~~al~~~~-----~---------------------~---gd~Vi~~~~~y~~~~~~~~~~~~~~----g--- 130 (392)
T 3qhx_A 87 FSSGMAAADCALRAML-----R---------------------P---GDHVVIPDDAYGGTFRLIDKVFTGW----N--- 130 (392)
T ss_dssp ESSHHHHHHHHHHHHC-----C---------------------T---TCEEEEETTCCHHHHHHHHHTGGGG----T---
T ss_pred ECCHHHHHHHHHHHHh-----C---------------------C---CCEEEEeCCCcchHHHHHHHHHHhc----C---
Confidence 3799999999998651 1 1 4589999999987543221111100 0
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+.++|. ++ ++++++.+. +++.+|++|++++..|.+.+ +++|.++|++
T Consensus 131 -~~~~~v~~-------------~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 179 (392)
T 3qhx_A 131 -VEYTPVAL-------------AD------LDAVRAAIR------PTTRLIWVETPTNPLLSIAD----IAGIAQLGAD 179 (392)
T ss_dssp -CEEEEECT-------------TC------HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred -cEEEEeCC-------------CC------HHHHHHhhC------CCCeEEEEECCCCCCcEEec----HHHHHHHHHH
Confidence 01111221 12 456666553 47899999999999898765 8999999974
No 52
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=97.45 E-value=0.00017 Score=58.41 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|+++..+...|++ +|++++++|.++|++
T Consensus 172 ~~~l~~~l~------~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~ 213 (429)
T 1yiz_A 172 NNELEALFN------EKTKMIIINTPHNPLGKV-MDRAELEVVANLCKK 213 (429)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc------cCceEEEECCCCCCCCcc-CCHHHHHHHHHHHHH
Confidence 556666552 368899999888888876 468999999999974
No 53
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=97.42 E-value=0.00029 Score=58.77 Aligned_cols=102 Identities=12% Similarity=0.022 Sum_probs=66.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.|++.++.+..++ +|. .+..||....+|++.... +...|..
T Consensus 166 t~ggt~a~~~al~a~~~~g~~~-~g~--------------------~~d~Vi~~~~~~~~~~~~-~~~~G~~-------- 215 (514)
T 3mad_A 166 TSGGTESLLLAMKTYRDWARAT-KGI--------------------TAPEAVVPVSAHAAFDKA-AQYFGIK-------- 215 (514)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH-HCC--------------------SSCEEEEETTSCTHHHHH-HHHHTCE--------
T ss_pred cCcHHHHHHHHHHHHHHHhhhh-cCC--------------------CCCeEEEeCccchHHHHH-HHHcCCe--------
Confidence 4789999999999999886433 121 267899999888875433 2222211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . +. .| +++|++.+. .++++|+++..+...|.+.+ +++|.++|++
T Consensus 216 ---v~~v~~~~-~--~~-----~d------~~~Le~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 267 (514)
T 3mad_A 216 ---LVRTPLDA-D--YR-----AD------VAAMREAIT------PNTVVVAGSAPGYPHGVVDP----IPEIAALAAE 267 (514)
T ss_dssp ---EEEECBCT-T--SC-----BC------HHHHHHHCC------TTEEEEEEETTCTTTCCCCC----HHHHHHHHHH
T ss_pred ---eEEeeeCC-C--CC-----CC------HHHHHHHhc------cCCEEEEEeCCCCCCccccC----HHHHHHHHHH
Confidence 12233211 0 00 12 566766653 36889999999988898765 7899999974
No 54
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=97.41 E-value=5.7e-05 Score=61.62 Aligned_cols=39 Identities=13% Similarity=0.040 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++++|++|++++..|.+.+ +++|+++|++
T Consensus 142 ~~~l~~~i~------~~~~~v~~e~~~np~G~~~~----l~~i~~la~~ 180 (400)
T 3nmy_A 142 PAAFKAAIR------ADTKMVWIETPTNPMLKLVD----IAAIAVIARK 180 (400)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHHhc------cCCCEEEEECCCCCCCeeec----HHHHHHHHHH
Confidence 456666653 47899999999999998774 9999999974
No 55
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=97.34 E-value=0.00042 Score=55.22 Aligned_cols=103 Identities=7% Similarity=-0.049 Sum_probs=65.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.++++.+.+. + +.+||....+||+....+......
T Consensus 98 ~g~~~a~~~~~~~~~~~~------------------------~---gd~vl~~~p~~~~~~~~~~~~g~~---------- 140 (394)
T 2ay1_A 98 VGGTGALRQALELARMAN------------------------P---DLRVFVSDPTWPNHVSIMNFMGLP---------- 140 (394)
T ss_dssp EHHHHHHHHHHHHHHHHC------------------------T---TCCEEEEESCCHHHHHHHHHHTCC----------
T ss_pred CCchhHHHHHHHHHHhcC------------------------C---CCEEEEcCCCChhHHHHHHHcCCc----------
Confidence 579999999999887651 1 357999999999987654433211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ ++++++.+... .....++|++..+...|. .+|.+++++|.++|++
T Consensus 141 --~~~~~~~~~-~~~~-----~d------~~~l~~~l~~~---~~~~~~~~~~~~~nptG~-~~~~~~l~~i~~~~~~ 200 (394)
T 2ay1_A 141 --VQTYRYFDA-ETRG-----VD------FEGMKADLAAA---KKGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEK 200 (394)
T ss_dssp --EEEEECEET-TTTE-----EC------HHHHHHHHHTC---CTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred --eEEEecccc-cCCc-----cC------HHHHHHHHHhC---CCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 111222100 0000 12 56677777642 224566777777777786 5678999999999974
No 56
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.33 E-value=0.00013 Score=59.47 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+||++|++.|++.. . + + +..||+...+||+.......+.... +
T Consensus 80 ~sGt~A~~~~l~~~--~---~---------------------~---gd~vi~~~~~~~~~~~~~~~~~~~~----g---- 122 (421)
T 2ctz_A 80 ASGHAAQFLALTTL--A---Q---------------------A---GDNIVSTPNLYGGTFNQFKVTLKRL----G---- 122 (421)
T ss_dssp SSHHHHHHHHHHHH--C---C---------------------T---TCEEEECSCCCHHHHHHHHTHHHHT----T----
T ss_pred cCHHHHHHHHHHHH--h---C---------------------C---CCEEEEeCCCchHHHHHHHHHHHHc----C----
Confidence 68999999999865 1 1 1 4689999999999765542211100 0
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+.+++ +. ++ ++++++.|. +++.+|++|++++..|.+.+ +++|.++|++
T Consensus 123 ~~~~~~~-~~-----------~d------~~~l~~~i~------~~~~~v~~~~~~n~~G~~~~----l~~i~~~a~~ 172 (421)
T 2ctz_A 123 IEVRFTS-RE-----------ER------PEEFLALTD------EKTRAWWVESIGNPALNIPD----LEALAQAARE 172 (421)
T ss_dssp CEEEECC-TT-----------CC------HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred CEEEEEC-CC-----------CC------HHHHHHhhc------cCCeEEEEECCCCCCCcccC----HHHHHHHHHH
Confidence 0011120 10 12 456666653 37899999999999898765 8999999974
No 57
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=97.31 E-value=0.00061 Score=56.40 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|+..|++++|.+...+ |.. ++ |.+||... .+|+.+..++...|..
T Consensus 129 ~~ggt~a~~~al~~~~~~~~~~--Gd~----------------~~--r~~Vlv~~-~~h~~~~~~~~~~G~~-------- 179 (474)
T 1wyu_B 129 PAAGAHGELTGILIIRAYHEDR--GEG----------------RT--RRVVLVPD-SAHGSNPATASMAGYQ-------- 179 (474)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHT--TCT----------------TT--CCEEEEET-TSCTHHHHHHHHTTCE--------
T ss_pred ChHHHHHHHHHHHHHHHHHHhc--CCc----------------cC--CCEEEEeC-CcChhhHHHHHHCCCE--------
Confidence 4789999999999999875333 310 12 56777766 8889888776655431
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . +. -| +++|++.+. +++++||++.. ...|++. ..+++|.++|++
T Consensus 180 ---vv~v~~~~-~--~~-----~d------~~~L~~~i~------~~t~~v~~~~p-n~~G~~~---~~l~~i~~l~~~ 231 (474)
T 1wyu_B 180 ---VREIPSGP-E--GE-----VD------LEALKRELG------PHVAALMLTNP-NTLGLFE---RRILEISRLCKE 231 (474)
T ss_dssp ---EEEECBCT-T--SS-----BC------HHHHHHHCS------TTEEEEEECSS-CTTSCCC---TTHHHHHHHHHH
T ss_pred ---EEEecCCC-C--CC-----cC------HHHHHHhhC------CCceEEEEECC-CCCcccC---CCHHHHHHHHHH
Confidence 12233211 0 00 12 566666653 36899999973 4567662 358999999874
No 58
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=97.30 E-value=0.00021 Score=57.17 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcC-CCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTT-HSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s-~~~~~~~~~~ 79 (159)
++|||+|+++++++. . + +.+||++..+|||.+...+... +..
T Consensus 57 ~~sgt~a~~~~~~~~------~---------------------~---gd~vi~~~~~~~~~~~~~~~~~~g~~------- 99 (379)
T 3ke3_A 57 PGSGTYGMEAVARQL------T---------------------I---DEDCLIIRNGWFSYRWTQILEKGKFA------- 99 (379)
T ss_dssp ESCHHHHHHHHHHHH------C---------------------T---TCEEEEEECSHHHHHHHHHHHHHCCS-------
T ss_pred cCChhHHHHHHHHhC------C---------------------C---CCeEEEEeCCchhHHHHHHHHHhCCC-------
Confidence 369999999987542 1 1 4689999999999876544321 110
Q ss_pred CCCCCCcccCCC-----CCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHH
Q psy4805 80 PAFDWPIASFPK-----YKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQ 154 (159)
Q Consensus 80 ~~~~~~~~p~p~-----~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr 154 (159)
..+..++.+. +..++. ..+ ++++++.+... ++.+|++..+....|+ +.|.+|+++|.
T Consensus 100 --~~~~~~~~~~~g~~~~~~~~~----~~d------~~~l~~~i~~~-----~~~~v~~~~~~~~~G~-~~~~~~l~~i~ 161 (379)
T 3ke3_A 100 --KSSTVLTAERTEDTEAPKPFA----PVD------IETAVAKIKED-----KSAIVYAPHVETSSGI-ILSEEYIKALS 161 (379)
T ss_dssp --SEEEEEECEESSCCSSCCCEE----CCC------HHHHHHHHHHH-----TCSEEEEESEETTTTE-ECCHHHHHHHH
T ss_pred --CceEEEeccccccccccCCCC----CCC------HHHHHHHHhhc-----CCcEEEEEeecCCCce-eCCHHHHHHHH
Confidence 0111222211 001110 012 56777777542 2344666555555665 45788999999
Q ss_pred HHhcC
Q psy4805 155 KIGKK 159 (159)
Q Consensus 155 ~lc~~ 159 (159)
++|++
T Consensus 162 ~~~~~ 166 (379)
T 3ke3_A 162 EAVHS 166 (379)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 59
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.28 E-value=0.00046 Score=55.08 Aligned_cols=94 Identities=13% Similarity=0.175 Sum_probs=59.3
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+|||+|++.|++... + +..+|.+...+|+.+..++...+..
T Consensus 112 ~sGs~a~~~~~~~~~--------~----------------------~gd~v~~~~~~~~~~~~~~~~~g~~--------- 152 (401)
T 1fc4_A 112 SSCFDANGGLFETLL--------G----------------------AEDAIISDALNHASIIDGVRLCKAK--------- 152 (401)
T ss_dssp SCHHHHHHTTHHHHC--------C----------------------TTCEEEEETTCCHHHHHHHHTSCSE---------
T ss_pred CChHHHHHHHHHHHc--------C----------------------CCCEEEEcchhHHHHHHHHHHcCCc---------
Confidence 689999998887641 1 2245666777888777665544321
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++|. .+ ++++++.+......+.++++|++++.+...|.+.+ +++|.++|++
T Consensus 153 ----~~~~~~-----------~d------~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~ 205 (401)
T 1fc4_A 153 ----RYRYAN-----------ND------MQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADK 205 (401)
T ss_dssp ----EEEECT-----------TC------HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred ----eEEECC-----------CC------HHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHH
Confidence 112221 12 34566666543111126889999999998898765 8999999974
No 60
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.27 E-value=0.00063 Score=54.34 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.|++... + +...|.+...+|+.+..++...|..
T Consensus 109 ~~ggt~a~~~~~~~~~--------~----------------------~gd~V~~~~p~~~~~~~~~~~~g~~-------- 150 (398)
T 3a2b_A 109 FSTGFQSNLGPLSCLM--------G----------------------RNDYILLDERDHASIIDGSRLSFSK-------- 150 (398)
T ss_dssp ESSHHHHHHHHHHHSS--------C----------------------TTCEEEEETTCCHHHHHHHHHSSSE--------
T ss_pred ECCHHHHHHHHHHHHh--------C----------------------CCCEEEECCccCHHHHHHHHHcCCc--------
Confidence 4689999999888651 1 2244556667788777766655421
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.|. .+ +++|++.+.... .+++.+|++++++...|.+.+ +++|.++|++
T Consensus 151 -----~~~v~~-----------~d------~~~l~~~l~~~~--~~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~ 201 (398)
T 3a2b_A 151 -----VIKYGH-----------NN------MEDLRAKLSRLP--EDSAKLICTDGIFSMEGDIVN----LPELTSIANE 201 (398)
T ss_dssp -----EEEECT-----------TC------HHHHHHHHHTSC--SSSCEEEEEESBCTTTCCBCC----HHHHHHHHHH
T ss_pred -----eEEeCC-----------CC------HHHHHHHHHhhc--cCCceEEEEeCCCCCCCCccC----HHHHHHHHHH
Confidence 112221 12 456777776531 126889999999988888764 8999999874
No 61
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=97.27 E-value=0.0001 Score=58.43 Aligned_cols=96 Identities=16% Similarity=0.097 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh-hhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC-LSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga-~s~s~~~~~~~~~~ 79 (159)
+++|++|++.|++.. . . + +.+||....+|||..... ....|..
T Consensus 80 ~~gg~~al~~~~~~~--~------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~g~~------- 123 (393)
T 3kgw_A 80 SGSGHCAMETALFNL--L------E------------------P---GDSFLTGTNGIWGMRAAEIADRIGAR------- 123 (393)
T ss_dssp SCCTTTHHHHHHHHH--C------C------------------T---TCEEEEEESSHHHHHHHHHHHHTTCE-------
T ss_pred eCCcHHHHHHHHHhc--C------C------------------C---CCEEEEEeCCchhHHHHHHHHHcCCc-------
Confidence 479999999999865 1 1 2 467888888988754322 2222211
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .. .| +++|++.+... ++.+|++++.++..|++.+ +++|+++|++
T Consensus 124 ----~~~~~~~~~-~~-------~d------~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 176 (393)
T 3kgw_A 124 ----VHQMIKKPG-EH-------YT------LQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP----LDGFGELCHR 176 (393)
T ss_dssp ----EEEEECCTT-CC-------CC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CTTHHHHHHH
T ss_pred ----eEEEeCCCC-CC-------CC------HHHHHHHHhhC-----CCcEEEEeccCCcchhhcc----HHHHHHHHHH
Confidence 112232110 00 12 56777777652 5789999999998898765 7889999974
No 62
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=97.27 E-value=0.00065 Score=54.51 Aligned_cols=108 Identities=7% Similarity=0.022 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCC--CCCceEEEEcCCCCccchhhhhcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPG--APNLSILSFKGAFHGRTLGCLSTTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g--~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~ 78 (159)
+++|++|++.++++++.+. +| .++.+||....+||+....+.......
T Consensus 105 t~gg~~a~~~~~~~~~~~~------------------------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~------ 154 (412)
T 1ajs_A 105 SLGGTGALRIGAEFLARWY------------------------NGTNNKDTPVYVSSPTWENHNGVFTTAGFKD------ 154 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHS------------------------SSSSCCCSCEEEEESCCTHHHHHHHHTTCSC------
T ss_pred CCCcHHHHHHHHHHHHHhC------------------------cCcCCCCCeEEEcCCCcHHHHHHHHHcCCce------
Confidence 3679999999999876551 11 001689999999999765544332110
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... ...+. .+ ++++++.+... ..+..++++...+...|. ++|.+++++|.++|+
T Consensus 155 -----~~~~~~~~-~~~~~-----~d------~~~l~~~l~~~---~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~ 213 (412)
T 1ajs_A 155 -----IRSYRYWD-TEKRG-----LD------LQGFLSDLENA---PEFSIFVLHACAHNPTGT-DPTPEQWKQIASVMK 213 (412)
T ss_dssp -----EEEEECEE-TTTTE-----EC------HHHHHHHHHHS---CTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHH
T ss_pred -----eEEEeeec-CCCCc-----cC------HHHHHHHHHhC---CCCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHH
Confidence 11122200 00000 12 56677777653 224445544433444464 578899999999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 214 ~ 214 (412)
T 1ajs_A 214 R 214 (412)
T ss_dssp H
T ss_pred H
Confidence 4
No 63
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=97.22 E-value=0.00024 Score=55.97 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=50.4
Q ss_pred CceEEEEcCCCCccchhhhh-cCCCccccccCCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCC
Q psy4805 48 NLSILSFKGAFHGRTLGCLS-TTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGT 126 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T~ga~s-~s~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~ 126 (159)
+.+||....+|||.+...+. ..|.. +..+|.+. .. . .| ++++++.+.. .
T Consensus 77 gd~vi~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~-~~----~---~d------~~~l~~~i~~-----~ 126 (384)
T 3zrp_A 77 NDKILVVSNGVFGDRWEQIFKRYPVN-----------VKVLRPSP-GD----Y---VK------PGEVEEEVRK-----S 126 (384)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTSSCE-----------EEEECCST-TC----C---CC------HHHHHHHHHH-----S
T ss_pred CCEEEEecCCcchHHHHHHHHHcCCc-----------EEEecCCC-CC----C---CC------HHHHHHHHHh-----C
Confidence 46899999999997554332 12211 11223221 00 0 12 5677777765 2
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|++++++...|.+.+ +++|.++|++
T Consensus 127 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 155 (384)
T 3zrp_A 127 EYKLVALTHVETSTGVREP----VKDVINKIRK 155 (384)
T ss_dssp CEEEEEEESEETTTTEECC----HHHHHHHHGG
T ss_pred CCcEEEEeCCCCCCceECc----HHHHHHHHHh
Confidence 5889999999998898765 8899999985
No 64
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.22 E-value=0.0003 Score=56.33 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++++|++|++++..|.+.+ +++|+++|++
T Consensus 127 ~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 165 (386)
T 1cs1_A 127 EQALRAALA------EKPKLVLVESPSNPLLRVVD----IAKICHLARE 165 (386)
T ss_dssp HHHHHHHHH------TCCSEEEEECSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHhhc------cCCcEEEEeCCCCCCCcccC----HHHHHHHHHH
Confidence 566777765 25789999999999998764 8899999874
No 65
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=97.22 E-value=0.00046 Score=56.03 Aligned_cols=106 Identities=12% Similarity=0.026 Sum_probs=63.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++..+. + ...|+....+||+........+|..
T Consensus 117 ~~gg~~a~~~~~~~l~~--------------------------~---gd~vl~~~p~~~~~~~~~~~~~g~~-------- 159 (435)
T 3piu_A 117 TAGATSANETFIFCLAD--------------------------P---GEAVLIPTPYYPGFDRDLKWRTGVE-------- 159 (435)
T ss_dssp EEHHHHHHHHHHHHHCC--------------------------T---TCEEEEEESCCTTHHHHTTTTTCCE--------
T ss_pred cCChHHHHHHHHHHhcC--------------------------C---CCeEEECCCccccHHHHHHHhcCCE--------
Confidence 36789999999986521 1 3578999999887765433233321
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .| +++|++.+........++.+||+++.+...|.+ +|.+.+++|.++|++
T Consensus 160 ---~~~~~~~~~-~~~~-----~d------~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~ 222 (435)
T 3piu_A 160 ---IVPIHCTSS-NGFQ-----IT------ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT-MTRNELYLLLSFVED 222 (435)
T ss_dssp ---EEEEECCGG-GTSC-----CC------HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEeeCCCc-cCCc-----CC------HHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 111222100 0000 02 455666665432123478899999878878874 567789999999974
No 66
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=97.21 E-value=0.0009 Score=53.22 Aligned_cols=104 Identities=6% Similarity=-0.117 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.++++++.+. + ..+||....+||+....+......
T Consensus 100 ~~g~~~a~~~~~~~~~~~~------------------------~---gd~Vl~~~p~y~~~~~~~~~~g~~--------- 143 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKNT------------------------S---VKRVWVSNPSWPNHKSVFNSAGLE--------- 143 (396)
T ss_dssp ESHHHHHHHHHHHHHHHHS------------------------C---CCEEEEEESCCTHHHHHHHHTTCE---------
T ss_pred cccchhhHHHHHHHHHHhC------------------------C---CCEEEEcCCCchhHHHHHHHcCCc---------
Confidence 3689999999999886551 1 457999999999987655443211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ ++++++.+... .....++++...+...|. ++|.+++++|.++|++
T Consensus 144 ---~~~~~~~~~-~~~~-----~d------~~~l~~~l~~~---~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~ 203 (396)
T 2q7w_A 144 ---VREYAYYDA-ENHT-----LD------FDALINSLNEA---QAGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVE 203 (396)
T ss_dssp ---EEEEECEET-TTTE-----EC------HHHHHHHHTTC---CTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred ---eEEEecccC-CCCC-----cC------HHHHHHHHHhC---CCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 011222000 0000 12 56677776542 123455555545555565 5678999999999974
No 67
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=97.18 E-value=0.00035 Score=55.85 Aligned_cols=99 Identities=8% Similarity=-0.008 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh---cCCCcccccc
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS---TTHSKYIHKI 77 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s---~s~~~~~~~~ 77 (159)
+++|++|++.+++.+++.. . . + ..+||....+||+....... ..|..
T Consensus 96 ~~g~t~a~~~~~~~~~~~~-~---~------------------~---gd~Vl~~~~~~~~~~~~~~~~~~~~g~~----- 145 (420)
T 1t3i_A 96 TRNATEAINLVAYSWGMNN-L---K------------------A---GDEIITTVMEHHSNLVPWQMVAAKTGAV----- 145 (420)
T ss_dssp ESSHHHHHHHHHHHTHHHH-C---C------------------T---TCEEEEETTCCGGGTHHHHHHHHHHCCE-----
T ss_pred cCChHHHHHHHHHHhhhcc-c---C------------------C---CCEEEECcchhHHHHHHHHHHHHhcCcE-----
Confidence 4689999999999885421 1 1 1 46899999999997532111 11211
Q ss_pred CCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 78 DIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 78 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+..+|... . +. .+ ++++++.+. .++.+|++++.+...|.+.+ +++|.++|
T Consensus 146 ------~~~v~~~~-~--~~-----~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~ 195 (420)
T 1t3i_A 146 ------LKFVQLDE-Q--ES-----FD------LEHFKTLLS------EKTKLVTVVHISNTLGCVNP----AEEIAQLA 195 (420)
T ss_dssp ------EEEECBCT-T--SS-----BC------HHHHHHHCC------TTEEEEEEESBCTTTCBBCC----HHHHHHHH
T ss_pred ------EEEeccCC-C--CC-----cC------HHHHHHhhC------CCceEEEEeCCcccccCcCC----HHHHHHHH
Confidence 11222211 0 00 12 456666553 36889999999988898765 89999999
Q ss_pred cC
Q psy4805 158 KK 159 (159)
Q Consensus 158 ~~ 159 (159)
++
T Consensus 196 ~~ 197 (420)
T 1t3i_A 196 HQ 197 (420)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 68
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=97.13 E-value=0.0013 Score=53.10 Aligned_cols=48 Identities=10% Similarity=0.139 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+........++.+|+++..+...|.+ .|++++++|.++|++
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 219 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT-LDKDTLKSVLSFTNQ 219 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 455666665421113468888877656667875 588999999999974
No 69
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=97.13 E-value=0.0004 Score=54.98 Aligned_cols=99 Identities=11% Similarity=0.091 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+........ |..
T Consensus 87 ~~g~~~a~~~~~~~l~--------~------------------~---gd~Vl~~~~~~~~~~~~~~~~-g~~-------- 128 (375)
T 3op7_A 87 TNGATGANLLVLYSLI--------E------------------P---GDHVISLYPTYQQLYDIPKSL-GAE-------- 128 (375)
T ss_dssp ESHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESSCTHHHHHHHHT-TCE--------
T ss_pred cCChHHHHHHHHHHhc--------C------------------C---CCEEEEeCCCchhHHHHHHHc-CCE--------
Confidence 3688999999998551 1 2 467999999999865443222 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... ...+ . .| +++|++.+. .++.+|++++.+...|.+ .|++++++|.++|++
T Consensus 129 ---~~~v~~~~-~~~~--~---~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~-~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 129 ---VDLWQIEE-ENGW--L---PD------LEKLRQLIR------PTTKMICINNANNPTGAV-MDRTYLEELVEIASE 185 (375)
T ss_dssp ---EEEEEEEG-GGTT--E---EC------HHHHHHHCC------TTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHT
T ss_pred ---EEEEeccc-cCCC--C---CC------HHHHHHhhc------cCCeEEEEcCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 11122110 0000 0 02 566666653 367889999999888875 578999999999985
No 70
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=97.08 E-value=0.0002 Score=56.60 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh-cCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS-TTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s-~s~~~~~~~~~~ 79 (159)
++||++|++.+++... . + +.+||....+||+.....+. ..+.
T Consensus 77 ~~ggt~al~~~~~~~~--------~------------------~---gd~vi~~~~~~~~~~~~~~~~~~g~-------- 119 (376)
T 3f0h_A 77 TCSSTGSMEAVVMNCF--------T------------------K---KDKVLVIDGGSFGHRFVQLCEIHEI-------- 119 (376)
T ss_dssp SSCHHHHHHHHHHHHC--------C------------------T---TCCEEEEESSHHHHHHHHHHHHTTC--------
T ss_pred cCChhHHHHHHHHhcc--------C------------------C---CCeEEEEeCChhhHHHHHHHHHcCC--------
Confidence 3678999999998652 1 2 45799999899986533221 1111
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.+.. +. .+ ++++++.+ ..++.+|++++.+...|++.+ +++|.++|++
T Consensus 120 ---~~~~v~~~~~---~~-----~d------~~~l~~~~------~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 172 (376)
T 3f0h_A 120 ---PYVALKLEHG---KK-----LT------KEKLYEYD------NQNFTGLLVNVDETSTAVLYD----TMMIGEFCKK 172 (376)
T ss_dssp ---CEEEEECCTT---CC-----CC------HHHHHTTT------TSCCCEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred ---ceEEEeCCCC---CC-----CC------HHHHHHhh------ccCceEEEEecccCCcceecC----HHHHHHHHHH
Confidence 1112232210 00 12 45555433 246888999999999998776 9999999974
No 71
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=97.08 E-value=0.00021 Score=57.01 Aligned_cols=95 Identities=12% Similarity=0.002 Sum_probs=61.3
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh-hhcCCCccccccCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC-LSTTHSKYIHKIDIP 80 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga-~s~s~~~~~~~~~~~ 80 (159)
+||++|++.|++.. . . + +.+||....+|||..... +...|..
T Consensus 71 ~sgt~al~~~~~~~--~------~------------------~---gd~Vl~~~~~~~~~~~~~~~~~~g~~-------- 113 (411)
T 3nnk_A 71 GTSRAGIEAILVSA--I------R------------------P---GDKVLVPVFGRFGHLLCEIARRCRAE-------- 113 (411)
T ss_dssp SCHHHHHHHHHHHH--C------C------------------T---TCEEEEEECSHHHHHHHHHHHHTTCE--------
T ss_pred CCcHHHHHHHHHHh--c------C------------------C---CCEEEEecCCchHHHHHHHHHHcCCe--------
Confidence 57899999999876 1 1 1 568999999999964322 2222211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.+. ... .| +++|++.+... ++.+|++++.+...|++.+ +++|.++|++
T Consensus 114 ---~~~v~~~~-~~~-------~d------~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 166 (411)
T 3nnk_A 114 ---VHTIEVPW-GEV-------FT------PDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP----LAELGEICRR 166 (411)
T ss_dssp ---EEEEECCT-TCC-------CC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CTTHHHHHHH
T ss_pred ---EEEEecCC-CCC-------CC------HHHHHHHHhhC-----CCeEEEEeCCCCCcceecc----HHHHHHHHHH
Confidence 12233321 000 12 56777777642 5789999999999998765 7788888874
No 72
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=97.08 E-value=0.0016 Score=51.20 Aligned_cols=100 Identities=6% Similarity=0.002 Sum_probs=63.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.|++.+. . + +..|+....+||+.... +...|..
T Consensus 76 ~g~t~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~-~~~~g~~--------- 116 (371)
T 2e7j_A 76 NGAREAKFAVMHSLA--------K------------------K---DAWVVMDENCHYSSYVA-AERAGLN--------- 116 (371)
T ss_dssp SSHHHHHHHHHHHHC--------C------------------T---TCEEEEETTCCHHHHHH-HHHTTCE---------
T ss_pred CChHHHHHHHHHHHh--------C------------------C---CCEEEEccCcchHHHHH-HHHcCCe---------
Confidence 567899999998762 1 1 46899999999998765 3333311
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.+.... . . -+ +++|++.+.+... .+++.+|++++.+...|.+.+ +++|.++|++
T Consensus 117 --~~~v~~~~~~~-~--~---~d------~~~l~~~l~~~~~-~~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~ 175 (371)
T 2e7j_A 117 --IALVPKTDYPD-Y--A---IT------PENFAQTIEETKK-RGEVVLALITYPDGNYGNLPD----VKKIAKVCSE 175 (371)
T ss_dssp --EEEECCCCTTT-C--C---CC------HHHHHHHHHHHTT-TSCEEEEEEESSCTTTCCCCC----HHHHHHHHHT
T ss_pred --EEEeecccCCC-C--C---cC------HHHHHHHHHhhcc-cCCeEEEEEECCCCCCcccCC----HHHHHHHHHH
Confidence 11223111000 0 0 02 5667777765421 147889999999998898765 4889999875
No 73
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=97.06 E-value=0.0015 Score=51.42 Aligned_cols=107 Identities=21% Similarity=0.193 Sum_probs=64.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhh-cCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNK-QRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~ 79 (159)
+++|++|++.|++.++..+..+ ..+.. .+ ++..|+....+|++.... +...|..
T Consensus 92 ~~ggt~a~~~~~~~~~~~~~~~~~~~~~----------------~~-~gd~vl~~~~~~~~~~~~-~~~~g~~------- 146 (397)
T 3f9t_A 92 VSGGTEANLMALRCIKNIWREKRRKGLS----------------KN-EHPKIIVPITAHFSFEKG-REMMDLE------- 146 (397)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHTTCC----------------CC-SSCEEEEETTCCTHHHHH-HHHHTCE-------
T ss_pred ecCcHHHHHHHHHHHHHHHHhhhhhccc----------------CC-CCeEEEECCcchhHHHHH-HHHcCce-------
Confidence 4799999999999998764321 01110 11 256888888888875433 3322211
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... +. .+ +++|++.+... ++.+||+++.+...|.+.+ +++|.++|++
T Consensus 147 ----~~~v~~~~~---~~-----~d------~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 199 (397)
T 3f9t_A 147 ----YIYAPIKED---YT-----ID------EKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN----IEELSKIAKE 199 (397)
T ss_dssp ----EEEECBCTT---SS-----BC------HHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC----HHHHHHHHHH
T ss_pred ----eEEEeeCCC---Cc-----CC------HHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC----HHHHHHHHHH
Confidence 112232110 00 12 56777777642 5678888888888887754 8889999874
No 74
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=97.04 E-value=0.00068 Score=54.63 Aligned_cols=92 Identities=12% Similarity=0.028 Sum_probs=59.4
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+||++|++.|++... . + ..+||....+||+.......+.....
T Consensus 87 ~sG~~a~~~~l~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~~~g-------- 129 (398)
T 1gc0_A 87 ASGMGAITSTLWTLL--------R------------------P---GDEVLLGNTLYGCTFAFLHHGIGEFG-------- 129 (398)
T ss_dssp SSHHHHHHHHHHHHC--------C------------------T---TCEEEEESSCCSHHHHHHHHTGGGGT--------
T ss_pred CCHHHHHHHHHHHHh--------c------------------C---CCEEEEeCCCchhHHHHHHHHHHHcC--------
Confidence 689999999998761 1 1 45799999999986544322211100
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+.+++. .+ ++++++.+. +++.+|++|+++...|.+.+ +++|.++|++
T Consensus 130 ~~~~~~~~-------------~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 178 (398)
T 1gc0_A 130 VKLRHVDM-------------AD------LQALEAAMT------PATRVIYFESPANPNMHMAD----IAGVAKIARK 178 (398)
T ss_dssp CEEEEECT-------------TC------HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHGG
T ss_pred CEEEEECC-------------CC------HHHHHHhcC------CCCeEEEEECCCCCCccccc----HHHHHHHHHH
Confidence 00111111 12 455665553 37899999999988888763 8999999975
No 75
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=96.97 E-value=0.00023 Score=55.59 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=32.4
Q ss_pred HHHHHH-HHHHhc-cCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVED-LITKYN-KKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~-~i~~~~-~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++ .+.... ..+.++.+|++++.. +.|. ++|.+++++|.++|++
T Consensus 123 ~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~-~~~~~~l~~i~~~~~~ 171 (356)
T 1v72_A 123 IVRLRERTREKVGDVHTTQPACVSITQAT-EVGS-IYTLDEIEAIGDVCKS 171 (356)
T ss_dssp HHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSC-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcchhhccCCceEEEEEcCC-CCCc-cCCHHHHHHHHHHHHH
Confidence 456666 554210 012368999999954 6786 4688999999999974
No 76
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=96.97 E-value=0.0023 Score=50.76 Aligned_cols=98 Identities=6% Similarity=0.001 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+|+....+||+....+ ...|..
T Consensus 97 ~~g~~~a~~~~~~~~~--------~------------------~---gd~vl~~~p~~~~~~~~~-~~~g~~-------- 138 (386)
T 1u08_A 97 TAGATEALYAAITALV--------R------------------N---GDEVICFDPSYDSYAPAI-ALSGGI-------- 138 (386)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCTTHHHHH-HHTTCE--------
T ss_pred cCChHHHHHHHHHHhC--------C------------------C---CCEEEEeCCCchhHHHHH-HHcCCE--------
Confidence 3678899999988651 1 1 458999999999876533 222211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+. .+ +++|++.+. .++.+|+++..+...|.+ .|.+++++|.++|++
T Consensus 139 ---~~~v~~~~~--~~~-----~d------~~~l~~~l~------~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~ 194 (386)
T 1u08_A 139 ---VKRMALQPP--HFR-----VD------WQEFAALLS------ERTRLVILNTPHNPSATV-WQQADFAALWQAIAG 194 (386)
T ss_dssp ---EEEEECCTT--TCC-----CC------HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTT
T ss_pred ---EEEeecCcc--cCc-----CC------HHHHHHhhc------ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHH
Confidence 111222110 000 12 456666552 367889998778778875 578899999999985
No 77
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=96.94 E-value=0.00094 Score=52.68 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh-hcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL-STTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~-s~s~~~~~~~~~~ 79 (159)
+++|++|++.+++... . + +..|+....+|||.+...+ ...|..
T Consensus 77 ~~g~t~a~~~~~~~l~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~g~~------- 120 (386)
T 2dr1_A 77 PSSGTGIMEASIRNGV--------S------------------K---GGKVLVTIIGAFGKRYKEVVESNGRK------- 120 (386)
T ss_dssp SSCHHHHHHHHHHHHS--------C------------------T---TCEEEEEESSHHHHHHHHHHHHTTCE-------
T ss_pred eCChHHHHHHHHHHhh--------c------------------C---CCeEEEEcCCchhHHHHHHHHHhCCc-------
Confidence 4789999999998651 1 1 4689999999999532221 112211
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . . ..+ +++|++.+++ ..++.+|++++.+...|.+.+ +++|.++|++
T Consensus 121 ----~~~v~~~~-~--~-----~~d------~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 174 (386)
T 2dr1_A 121 ----AVVLEYEP-G--K-----AVK------PEDLDDALRK----NPDVEAVTITYNETSTGVLNP----LPELAKVAKE 174 (386)
T ss_dssp ----EEEEECCT-T--C-----CCC------HHHHHHHHHH----CTTCCEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred ----eEEEecCC-C--C-----CCC------HHHHHHHHhc----CCCCcEEEEEeecCCcchhCC----HHHHHHHHHH
Confidence 11222211 0 0 012 5667777764 236789999999988888754 7899999874
No 78
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=96.94 E-value=0.0018 Score=50.93 Aligned_cols=97 Identities=4% Similarity=-0.074 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ...||....+||+....+... |..
T Consensus 92 ~g~t~a~~~~~~~~~--------~------------------~---gd~Vl~~~~~~~~~~~~~~~~-g~~--------- 132 (367)
T 3euc_A 92 NGSDEIISMLALAAA--------R------------------P---GAKVMAPVPGFVMYAMSAQFA-GLE--------- 132 (367)
T ss_dssp EHHHHHHHHHHHHTC--------C------------------T---TCEEEEEESCSCCSCHHHHTT-TCE---------
T ss_pred CCHHHHHHHHHHHHc--------C------------------C---CCEEEEcCCCHHHHHHHHHHc-CCe---------
Confidence 578889988887541 1 1 357999999999986554322 211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... .+. .+ +++|++.+... ++.+|+++..+...|.+. |.+.+++|.++|++
T Consensus 133 --~~~v~~~~---~~~-----~d------~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~ 188 (367)
T 3euc_A 133 --FVGVPLRA---DFT-----LD------RGAMLAAMAEH-----QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQG 188 (367)
T ss_dssp --EEEEECCT---TSC-----CC------HHHHHHHHHHH-----CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBT
T ss_pred --EEEecCCC---CCC-----CC------HHHHHHHhhcc-----CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhh
Confidence 11222211 000 12 56777777653 467888887788788755 67889999999985
No 79
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=96.94 E-value=0.00083 Score=53.16 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+......
T Consensus 91 ~~g~~~a~~~~~~~l~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~g~~--------- 132 (391)
T 3dzz_A 91 ASGVVPAISAMVRQFT--------S------------------P---GDQILVQEPVYNMFYSVIEGNGRR--------- 132 (391)
T ss_dssp ESCHHHHHHHHHHHHS--------C------------------T---TCEEEECSSCCHHHHHHHHHTTCE---------
T ss_pred CCCHHHHHHHHHHHhC--------C------------------C---CCeEEECCCCcHHHHHHHHHcCCE---------
Confidence 3678999999998651 1 1 458999999999876554432211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.......+ . .+ +++|++.+.. .++.+|+++..+...|.+. |+..+++|.++|++
T Consensus 133 ---~~~~~~~~~~~~~--~---~d------~~~l~~~l~~-----~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~ 191 (391)
T 3dzz_A 133 ---VISSDLIYENSKY--S---VN------WADLEEKLAT-----PSVRMMVFCNPHNPIGYAW-SEEEVKRIAELCAK 191 (391)
T ss_dssp ---EEECCCEEETTEE--E---CC------HHHHHHHHTS-----TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHH
T ss_pred ---EEEeeeeecCCce--e---ec------HHHHHHHHhc-----cCceEEEEECCCCCCCccc-CHHHHHHHHHHHHH
Confidence 0111210000000 0 12 5677777752 3677888887788888754 67789999999974
No 80
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=96.91 E-value=0.0016 Score=51.38 Aligned_cols=95 Identities=9% Similarity=-0.063 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+......
T Consensus 87 t~g~~~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~g~~--------- 128 (377)
T 3fdb_A 87 IPDVVRGLYIAIDHFT--------P------------------A---QSKVIVPTPAYPPFFHLLSATQRE--------- 128 (377)
T ss_dssp ESCHHHHHHHHHHHHS--------C------------------T---TCCEEEEESCCTHHHHHHHHHTCC---------
T ss_pred eCChHHHHHHHHHHhc--------C------------------C---CCEEEEcCCCcHhHHHHHHHcCCE---------
Confidence 3689999999998651 1 1 357999999999976544332211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+ +++|++.+.. ...+.+|..| +...|.+ .|.+.+++|.++|++
T Consensus 129 ---~~~~~~~~~----------~d------~~~l~~~l~~-----~~~~v~i~~p-~nptG~~-~~~~~l~~l~~~~~~ 181 (377)
T 3fdb_A 129 ---GIFIDATGG----------IN------LHDVEKGFQA-----GARSILLCNP-YNPLGMV-FAPEWLNELCDLAHR 181 (377)
T ss_dssp ---EEEEECTTS----------CC------HHHHHHHHHT-----TCCEEEEESS-BTTTTBC-CCHHHHHHHHHHHHH
T ss_pred ---EEEccCCCC----------CC------HHHHHHHhcc-----CCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHHHH
Confidence 111222110 02 5677777764 2335555556 7777875 467789999999974
No 81
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=96.90 E-value=0.0015 Score=52.07 Aligned_cols=101 Identities=10% Similarity=-0.010 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+||....+||+....+... |..
T Consensus 95 t~g~~~a~~~~~~~l~--------~------------------~---gd~vl~~~p~~~~~~~~~~~~-g~~-------- 136 (399)
T 1c7n_A 95 TAGVVPAVFNAVREFT--------K------------------P---GDGVIIITPVYYPFFMAIKNQ-ERK-------- 136 (399)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEECSSCCTHHHHHHHTT-TCE--------
T ss_pred cCCHHHHHHHHHHHhc--------C------------------C---CCEEEEcCCCcHhHHHHHHHc-CCE--------
Confidence 3678999999998541 1 1 457999999999987654332 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.......+ ..+ +++|++.+.. .++.+|++...+...|.+ +|++++++|.++|++
T Consensus 137 ---~~~~~~~~~~g~~-----~~d------~~~l~~~l~~-----~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~ 195 (399)
T 1c7n_A 137 ---IIECELLEKDGYY-----TID------FQKLEKLSKD-----KNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLK 195 (399)
T ss_dssp ---EEECCCEEETTEE-----ECC------HHHHHHHHTC-----TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHH
T ss_pred ---EEecccccCCCCE-----EEc------HHHHHHHhcc-----CCCcEEEEcCCCCCCCcC-cCHHHHHHHHHHHHH
Confidence 0111210000000 012 5667777652 357788876667767875 578999999999974
No 82
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=96.89 E-value=0.00044 Score=54.94 Aligned_cols=100 Identities=8% Similarity=0.041 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + +.+|+....+||+.... +...|..
T Consensus 84 ~~g~~~a~~~~~~~~~-----~---------------------~---gd~Vl~~~~~~~~~~~~-~~~~g~~-------- 125 (381)
T 1v2d_A 84 TSGATEALYVLLQSLV-----G---------------------P---GDEVVVLEPFFDVYLPD-AFLAGAK-------- 125 (381)
T ss_dssp ESSHHHHHHHHHHHHC-----C---------------------T---TCEEEEEESCCTTHHHH-HHHTTCE--------
T ss_pred cCChHHHHHHHHHHhC-----C---------------------C---CCEEEEcCCCchhHHHH-HHHcCCE--------
Confidence 4689999999998762 1 1 46899999999997643 2222211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|...+ +.... .+ +++|++.+. .++.+|+++..+...|.+ .|.+++++|.++|++
T Consensus 126 ---~~~v~~~~~--~~~~~---~d------~~~l~~~l~------~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~ 183 (381)
T 1v2d_A 126 ---ARLVRLDLT--PEGFR---LD------LSALEKALT------PRTRALLLNTPMNPTGLV-FGERELEAIARLARA 183 (381)
T ss_dssp ---EEEEECEEE--TTEEE---CC------HHHHHTTCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEEeCCCC--CccCC---cC------HHHHHHhcC------cCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHH
Confidence 111222100 00000 12 455555442 368899999888878876 567999999999974
No 83
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=96.88 E-value=0.005 Score=49.09 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+++++++.... .+++.+|++++++...|.+.+ +++|.++|++
T Consensus 164 ~~~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 206 (401)
T 2bwn_A 164 VAHLRELIAADD--PAAPKLIAFESVYSMDGDFGP----IKEICDIAEE 206 (401)
T ss_dssp HHHHHHHHHHSC--TTSCEEEEEESBCTTTCCBCC----HHHHHHHHHH
T ss_pred HHHHHHHHHhhc--cCCceEEEEecCcCCCCCcCC----HHHHHHHHHH
Confidence 456677776531 146889999999999898765 7899999974
No 84
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=96.86 E-value=0.00056 Score=55.91 Aligned_cols=39 Identities=10% Similarity=0.187 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|++|+.++..|.+.+ +++|.++|++
T Consensus 156 ~~~l~~ai~------~~t~~v~le~p~NptG~~~~----l~~i~~la~~ 194 (414)
T 3ndn_A 156 LSQWERALS------VPTQAVFFETPSNPMQSLVD----IAAVTELAHA 194 (414)
T ss_dssp HHHHHHHTS------SCCSEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHhcC------CCCeEEEEECCCCCCCcccc----HHHHHHHHHH
Confidence 456666653 36789999999999998754 8889999874
No 85
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=96.84 E-value=0.00078 Score=54.12 Aligned_cols=89 Identities=8% Similarity=0.005 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh---hcCCCccccccC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL---STTHSKYIHKID 78 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~---s~s~~~~~~~~~ 78 (159)
+||++|++.|++... + + ..+||....+||+...... ...|..
T Consensus 86 ~sG~~a~~~~l~~~~-----~---------------------~---gd~vi~~~~~~~~~~~~~~~~~~~~g~~------ 130 (398)
T 2rfv_A 86 ASGISAITTTLLTLC-----Q---------------------Q---GDHIVSASAIYGCTHAFLSHSMPKFGIN------ 130 (398)
T ss_dssp SSHHHHHHHHHHHHC-----C---------------------T---TCEEEEESSSCHHHHHHHHTHHHHTTCE------
T ss_pred CCHHHHHHHHHHHHh-----C---------------------C---CCEEEEcCCCcccHHHHHHHHHHHcCCE------
Confidence 689999999998761 1 1 4579999999988654331 111110
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|. ++ ++++++.+. +++.+|++|+.+...|.+.+ +++|.++|+
T Consensus 131 -----~~~v~~-------------~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~ 176 (398)
T 2rfv_A 131 -----VRFVDA-------------AK------PEEIRAAMR------PETKVVYIETPANPTLSLVD----IETVAGIAH 176 (398)
T ss_dssp -----EEEECT-------------TS------HHHHHHHCC------TTEEEEEEESSBTTTTBCCC----HHHHHHHHH
T ss_pred -----EEEeCC-------------CC------HHHHHHhcC------CCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 111111 12 455655543 36899999999998898774 899999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 177 ~ 177 (398)
T 2rfv_A 177 Q 177 (398)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=96.80 E-value=0.00041 Score=55.85 Aligned_cols=39 Identities=5% Similarity=0.049 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.+|++|+.++..|.+.+ +++|.++|++
T Consensus 134 ~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~ 172 (389)
T 3acz_A 134 VEKVKAAWK------PNTKMVYLESPANPTCKVSD----IKGIAVVCHE 172 (389)
T ss_dssp HHHHHHTCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHhcC------CCCeEEEEECCCCCCCeecC----HHHHHHHHHH
Confidence 455555543 36889999999998888764 7899998874
No 87
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=96.74 E-value=0.00098 Score=52.59 Aligned_cols=100 Identities=9% Similarity=-0.031 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+..... .
T Consensus 88 ~~g~~~a~~~~~~~l~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~g~-~-------- 129 (383)
T 3kax_A 88 SAGIVPALSTSIQAFT--------K------------------E---NESVLVQPPIYPPFFEMVTTNNR-Q-------- 129 (383)
T ss_dssp ESCHHHHHHHHHHHHC--------C------------------T---TCEEEECSSCCHHHHHHHHHTTC-E--------
T ss_pred cCCHHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCcHHHHHHHHHcCC-E--------
Confidence 4689999999998651 1 1 45899999999988755433221 1
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.......+ . .+ +++|++.+. .++.+|+++..+...|++ .|.+.+++|.++|++
T Consensus 130 ---~~~~~~~~~~~~~--~---~d------~~~l~~~l~------~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~ 187 (383)
T 3kax_A 130 ---LCVSPLQKQNDTY--A---ID------FEHLEKQFQ------QGVKLMLLCSPHNPIGRV-WKKEELTKLGSLCTK 187 (383)
T ss_dssp ---EEECCCEEETTEE--E---CC------HHHHHHHHT------TTCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHH
T ss_pred ---EEeccceecCCcE--E---Ec------HHHHHHHhC------cCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHH
Confidence 0111211000000 0 12 566777762 256677777778878874 578899999999974
No 88
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=96.74 E-value=0.0018 Score=51.38 Aligned_cols=98 Identities=9% Similarity=-0.033 Sum_probs=61.2
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ..+|+....+||+....+ ...|..
T Consensus 97 ~g~~~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~-~~~g~~--------- 137 (388)
T 1j32_A 97 NGGKQSIFNLMLAMI--------E------------------P---GDEVIIPAPFWVSYPEMV-KLAEGT--------- 137 (388)
T ss_dssp SHHHHHHHHHHHHHC--------C------------------T---TCEEEEESSCCTHHHHHH-HHTTCE---------
T ss_pred CCHHHHHHHHHHHhc--------C------------------C---CCEEEEcCCCChhHHHHH-HHcCCE---------
Confidence 567999999988662 1 2 357999999999876433 222211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ +++|++.+. .++.+|++++.+...|.+ .|++++++|.++|++
T Consensus 138 --~~~v~~~~~-~~~~-----~d------~~~l~~~l~------~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~ 194 (388)
T 1j32_A 138 --PVILPTTVE-TQFK-----VS------PEQIRQAIT------PKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVE 194 (388)
T ss_dssp --EEEECCCGG-GTTC-----CC------HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEecCCcc-cCCC-----CC------HHHHHHhcC------cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 111222100 0000 12 456666553 367888988888778876 468999999999974
No 89
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=96.73 E-value=0.0013 Score=52.94 Aligned_cols=99 Identities=7% Similarity=0.045 Sum_probs=61.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ...||....+||+....+ ...|..
T Consensus 93 ~g~~~al~~~~~~~~--------~------------------~---gd~Vl~~~~~y~~~~~~~-~~~g~~--------- 133 (411)
T 2o0r_A 93 VGATEAIAAAVLGLV--------E------------------P---GSEVLLIEPFYDSYSPVV-AMAGAH--------- 133 (411)
T ss_dssp EHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCTTHHHHH-HHTTCE---------
T ss_pred CCHHHHHHHHHHHhc--------C------------------C---CCEEEEeCCCcHhHHHHH-HHcCCE---------
Confidence 568899999887651 1 2 357999999999975433 222211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.......+ . .+ +++|++.+. .++.+|+++..+...|.+ +|.+++++|.++|++
T Consensus 134 --~~~v~~~~~~~~~--~---~d------~~~l~~~l~------~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~ 191 (411)
T 2o0r_A 134 --RVTVPLVPDGRGF--A---LD------ADALRRAVT------PRTRALIINSPHNPTGAV-LSATELAAIAEIAVA 191 (411)
T ss_dssp --EEEEECEEETTEE--E---CC------HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEeeccccccCC--C---CC------HHHHHHhhc------cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 1112221000000 0 12 556666553 367889999888888875 578999999999974
No 90
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=96.73 E-value=0.0013 Score=51.66 Aligned_cols=99 Identities=17% Similarity=0.112 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh--hcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL--STTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~--s~s~~~~~~~~~ 78 (159)
+++|++|++.+++.++.+. .+ + ...||....+||+...... ...|..
T Consensus 67 ~~g~t~a~~~~~~~~~~~~-~~---------------------~---gd~vl~~~~~~~~~~~~~~~~~~~g~~------ 115 (384)
T 1eg5_A 67 TSCATESINWILKTVAETF-EK---------------------R---KRTIITTPIEHKAVLETMKYLSMKGFK------ 115 (384)
T ss_dssp ESCHHHHHHHHHHHHHHHT-TT---------------------T---CCEEEECTTSCHHHHHHHHHHHHTTCE------
T ss_pred ECCHHHHHHHHHHhhhhhc-cC---------------------C---CCEEEECCCCchHHHHHHHHHHhcCCE------
Confidence 3689999999999886431 00 1 4579999999998754432 222211
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... . . ..+ +++|++.+. .++.+|++++.+...|.+.+ +++|.++|+
T Consensus 116 -----~~~v~~~~-~--~-----~~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----~~~i~~l~~ 166 (384)
T 1eg5_A 116 -----VKYVPVDS-R--G-----VVK------LEELEKLVD------EDTFLVSIMAANNEVGTIQP----VEDVTRIVK 166 (384)
T ss_dssp -----EEECCBCT-T--S-----CBC------HHHHHHHCC------TTEEEEEEESBCTTTCBBCC----HHHHHHHHH
T ss_pred -----EEEEccCC-C--C-----ccC------HHHHHHHhC------CCCeEEEEECCCCCcccccC----HHHHHHHHH
Confidence 11122211 0 0 012 456666553 36889999999888888765 688888886
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 167 ~ 167 (384)
T 1eg5_A 167 K 167 (384)
T ss_dssp H
T ss_pred h
Confidence 4
No 91
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=96.71 E-value=0.0011 Score=52.75 Aligned_cols=101 Identities=6% Similarity=-0.042 Sum_probs=60.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+||....+|||....+... |..
T Consensus 93 t~g~~~al~~~~~~l~--------~------------------~---gd~vl~~~p~y~~~~~~~~~~-g~~-------- 134 (390)
T 1d2f_A 93 GPSVIYMVSELIRQWS--------E------------------T---GEGVVIHTPAYDAFYKAIEGN-QRT-------- 134 (390)
T ss_dssp ESCHHHHHHHHHHHSS--------C------------------T---TCEEEEEESCCHHHHHHHHHT-TCE--------
T ss_pred cCCHHHHHHHHHHHhc--------C------------------C---CCEEEEcCCCcHHHHHHHHHC-CCE--------
Confidence 3678899999988541 1 1 458999999999987654332 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.......+. .+ +++|++.+.. .++.+|++...+...|.+ .|.+++++|.++|++
T Consensus 135 ---~~~v~~~~~~~~~~-----~d------~~~l~~~l~~-----~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 193 (390)
T 1d2f_A 135 ---VMPVALEKQADGWF-----CD------MGKLEAVLAK-----PECKIMLLCSPQNPTGKV-WTCDELEIMADLCER 193 (390)
T ss_dssp ---EEEEECEECSSSEE-----CC------HHHHHHHHTS-----TTEEEEEEESSCTTTCCC-CCTTHHHHHHHHHHH
T ss_pred ---EEEeecccCCCccc-----cC------HHHHHHHhcc-----CCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHH
Confidence 11122210000000 12 5667776642 257777765446667876 466899999999974
No 92
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=96.68 E-value=0.0011 Score=53.14 Aligned_cols=42 Identities=12% Similarity=0.129 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++.+|+++..+...|.+. |++.+++|.++|++
T Consensus 164 ~~~l~~~~~------~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~ 205 (422)
T 3fvs_A 164 PMELAGKFT------SRTKALVLNTPNNPLGKVF-SREELELVASLCQQ 205 (422)
T ss_dssp HHHHHTTCC------TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHH
T ss_pred HHHHHhhcC------CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHH
Confidence 455555442 3688899998888888765 88999999999974
No 93
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=96.60 E-value=0.0013 Score=52.15 Aligned_cols=42 Identities=7% Similarity=0.154 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|+++..+...|.+ .|++++++|.++|++
T Consensus 150 ~~~l~~~l~------~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~ 191 (389)
T 1gd9_A 150 VDELKKYVT------DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVE 191 (389)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC------cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 456666553 257888888777777875 578899999999974
No 94
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=96.60 E-value=0.002 Score=51.45 Aligned_cols=101 Identities=16% Similarity=0.077 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++.++. + ..+||....+||+..... ...|..
T Consensus 105 ~g~t~a~~~~~~~~~~--------------------------~---gd~vl~~~p~~~~~~~~~-~~~g~~--------- 145 (407)
T 2zc0_A 105 IGGTGALDLLGRVLID--------------------------P---GDVVITENPSYINTLLAF-EQLGAK--------- 145 (407)
T ss_dssp SHHHHHHHHHHHHHCC--------------------------T---TCEEEEEESCCHHHHHHH-HTTTCE---------
T ss_pred cCHHHHHHHHHHHhcC--------------------------C---CCEEEEeCCChHHHHHHH-HHcCCE---------
Confidence 5679999999987621 1 357999999999975433 322211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . . .+ +++|++.+........++.+|++. ..+...|++ .|.+++++|.++|++
T Consensus 146 --~~~v~~~~----~--~---~d------~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~-~~~~~l~~i~~~~~~ 206 (407)
T 2zc0_A 146 --IEGVPVDN----D--G---MR------VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT-MSMERRKALLEIASK 206 (407)
T ss_dssp --EEEEEEET----T--E---EC------HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEcccCC----C--C---CC------HHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 11122210 0 0 12 456666665210002367787544 467778875 578999999999974
No 95
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=96.60 E-value=0.0018 Score=51.20 Aligned_cols=99 Identities=10% Similarity=-0.042 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+......
T Consensus 96 ~~g~~~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~g~~--------- 137 (391)
T 4dq6_A 96 SPGVIPAISLLINELT--------K------------------A---NDKIMIQEPVYSPFNSVVKNNNRE--------- 137 (391)
T ss_dssp ESCHHHHHHHHHHHHS--------C------------------T---TCEEEECSSCCTHHHHHHHHTTCE---------
T ss_pred cCChHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCCHHHHHHHHHcCCe---------
Confidence 4689999999998651 1 1 357999999999976654432211
Q ss_pred CCCCCcccCC-CCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFP-KYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p-~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.. .....+ . .+ +++|++.+. . +.+|+++..+...|++ .|+..+++|.++|++
T Consensus 138 ---~~~~~~~~~~~~~~--~---~d------~~~l~~~l~------~-~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~ 195 (391)
T 4dq6_A 138 ---LIISPLQKLENGNY--I---MD------YEDIENKIK------D-VKLFILCNPHNPVGRV-WTKDELKKLGDICLK 195 (391)
T ss_dssp ---EEECCCEECTTSCE--E---CC------HHHHHHHCT------T-EEEEEEESSBTTTTBC-CCHHHHHHHHHHHHH
T ss_pred ---EEeeeeeecCCCce--E---ee------HHHHHHHhh------c-CCEEEEECCCCCCCcC-cCHHHHHHHHHHHHH
Confidence 0111211 000000 0 12 456666553 2 6677777778778875 567789999999974
No 96
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.0013 Score=53.77 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|+++..+...|.+ .+++++++|.++|++
T Consensus 191 ~~~l~~~l~------~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~ 232 (447)
T 3b46_A 191 FEQFEKAIT------SKTKAVIINTPHNPIGKV-FTREELTTLGNICVK 232 (447)
T ss_dssp HHHHHTTCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHhhc------cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHH
Confidence 455655542 368889998888888876 568999999999974
No 97
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=96.58 E-value=0.0014 Score=51.37 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=27.1
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++.+|++|+.+...|-.++|.+++++|.++|++
T Consensus 136 ~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~ 169 (359)
T 3pj0_A 136 EPVSSVLIELPQREIGGQLPAFEELEKISEYCHE 169 (359)
T ss_dssp SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEecccCCCcccCCHHHHHHHHHHHHH
Confidence 4688999998876543356788999999999974
No 98
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=96.56 E-value=0.0029 Score=50.82 Aligned_cols=98 Identities=11% Similarity=0.022 Sum_probs=59.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+||....+||+....+... |..
T Consensus 115 t~G~~~al~~~~~~l~--------~------------------~---gd~Vl~~~p~y~~~~~~~~~~-g~~-------- 156 (404)
T 2o1b_A 115 LYGTKNGLVAVPTCVI--------N------------------P---GDYVLLPDPGYTDYLAGVLLA-DGK-------- 156 (404)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCSSHHHHHHHT-TCE--------
T ss_pred cCCcHHHHHHHHHHhc--------C------------------C---CCEEEEcCCCchhHHHHHHHC-CCE--------
Confidence 3677899999988641 1 1 357999999999987654432 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+. .| +++|++.+.. ++.+|+++..+...|.+ .|.+++++|.++|++
T Consensus 157 ---~~~v~~~~~--~~~-----~d------~~~l~~~l~~------~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 212 (404)
T 2o1b_A 157 ---PVPLNLEPP--HYL-----PD------WSKVDSQIID------KTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKG 212 (404)
T ss_dssp ---EEEEECCTT--TCC-----CC------GGGSCHHHHH------HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTT
T ss_pred ---EEEeccCcc--cCc-----CC------HHHHHHhhcc------CceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHH
Confidence 111222110 000 01 2344445532 46788887556657765 578999999999985
No 99
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=96.54 E-value=0.005 Score=49.64 Aligned_cols=104 Identities=6% Similarity=-0.021 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.++++.... . + ...|+....+|++...........
T Consensus 123 t~G~t~al~~~~~~~~~~------~------------------~---gd~Vlv~~p~~~~~~~~~~~~g~~--------- 166 (420)
T 4f4e_A 123 ALGGTGALKIGADFLRTL------N------------------P---KAKVAISDPSWENHRALFDMAGFE--------- 166 (420)
T ss_dssp EEHHHHHHHHHHHHHHHH------C------------------T---TCCEEEEESCCHHHHHHHHHTTCC---------
T ss_pred CCccHHHHHHHHHHHHHh------C------------------C---CCEEEEeCCCcHhHHHHHHHcCCe---------
Confidence 357999999999876544 1 2 457999999999875544332211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|..+. ..+ . .+ ++.+++.+... ..+..++++...+...|++ ++.+.+++|.++|++
T Consensus 167 ---~~~v~~~~~-~~~--~---~d------~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~ 226 (420)
T 4f4e_A 167 ---VVAYPYYDA-KTN--G---VN------FDGMLAALNGY---EPGTIVVLHACCHNPTGVD-LNDAQWAQVVEVVKA 226 (420)
T ss_dssp ---EEEEECEET-TTT--E---EC------HHHHHHHHTTC---CTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEeeeecc-ccC--c---cC------HHHHHHHHHhC---CCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 111222000 000 0 12 56777777643 3467888888888888875 578889999999974
No 100
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=96.52 E-value=0.0073 Score=47.41 Aligned_cols=101 Identities=9% Similarity=-0.021 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++..+.++.. + ...||....+|++.......+....
T Consensus 66 ~~g~t~a~~~~~~~l~~~~~~----------------------~---gd~Vl~~~~~~~~~~~~~~~~~~~g-------- 112 (382)
T 4eb5_A 66 TSGATEANNLAIIGYAMRNAR----------------------K---GKHILVSAVEHMSVINPAKFLQKQG-------- 112 (382)
T ss_dssp ESSHHHHHHHHHHHHHHHHGG----------------------G---CCEEEEETTCCHHHHHHHHHHTTTT--------
T ss_pred cCchHHHHHHHHHHHHhhccC----------------------C---CCEEEECCCcchHHHHHHHHHHhCC--------
Confidence 368999999999988654311 1 3579999999987654433221100
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+..+|... . . . .| +++|++.+. .++.+|+++..+...|.+.+ +++|.++|++
T Consensus 113 -~~~~~v~~~~-~--~--~---~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 166 (382)
T 4eb5_A 113 -FEVEYIPVGK-Y--G--E---VD------VSFIDQKLR------DDTILVSVQHANNEIGTIQP----VEEISEVLAG 166 (382)
T ss_dssp -CEEEEECBCT-T--S--C---BC------HHHHHHHCC------TTEEEEECCSBCTTTCBBCC----HHHHHHHHTT
T ss_pred -cEEEEeccCC-C--C--c---cC------HHHHHHHhc------CCCeEEEEeccCCCccccCC----HHHHHHHHHH
Confidence 0111222211 0 0 0 12 455666553 25788999999988888765 6899999975
No 101
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=96.50 E-value=0.002 Score=50.95 Aligned_cols=96 Identities=8% Similarity=0.016 Sum_probs=58.2
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ..+|+....+||+....+... |..
T Consensus 94 ~g~~~a~~~~~~~l~--------~------------------~---gd~vl~~~p~y~~~~~~~~~~-g~~--------- 134 (376)
T 2dou_A 94 IGSQEGLAHLLLALT--------E------------------P---EDLLLLPEVAYPSYFGAARVA-SLR--------- 134 (376)
T ss_dssp SSHHHHHHHHHHHHC--------C------------------T---TCEEEEESSCCHHHHHHHHHT-TCE---------
T ss_pred CCcHHHHHHHHHHhc--------C------------------C---CCEEEECCCCcHhHHHHHHHc-CCE---------
Confidence 577899998887541 1 1 357999999999987655432 211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.+. .+. .| ++++++.+.. ++.+|+++..+...|.+ .|.+++++|.++|++
T Consensus 135 --~~~~~~~~---~~~-----~d------~~~l~~~l~~------~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 189 (376)
T 2dou_A 135 --TFLIPLRE---DGL-----AD------LKAVPEGVWR------EAKVLLLNYPNNPTGAV-ADWGYFEEALGLARK 189 (376)
T ss_dssp --EEEECBCT---TSS-----BC------GGGSCHHHHH------HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEeeCCC---CCC-----CC------HHHHHHhhcc------CceEEEECCCCCCcCcc-CCHHHHHHHHHHHHH
Confidence 11122211 000 01 2344445532 46777777446667865 578999999999974
No 102
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=96.49 E-value=0.0023 Score=51.13 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.+. ++.+|+++ |..| ....+++|+++|++
T Consensus 161 ~~~l~~~i~~~-----~~~~v~~~~~~~~-------~~~~l~~i~~l~~~ 198 (425)
T 3ecd_A 161 YDQVEALAQQH-----KPSLIIAGFSAYP-------RKLDFARFRAIADS 198 (425)
T ss_dssp HHHHHHHHHHH-----CCSEEEEECSCCC-------SCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhc-----CCcEEEEccccCC-------CcCCHHHHHHHHHH
Confidence 56777777643 46788888 5553 23457899999974
No 103
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=95.50 E-value=0.00043 Score=55.34 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.+.. .++.+++++..+...|.+ +|++++++|.++|++
T Consensus 153 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~ 195 (392)
T 3b1d_A 153 FEQLENDIVE-----NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQK 195 (392)
Confidence 4566666642 246678887677777875 567899999999975
No 104
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=96.48 E-value=0.0015 Score=51.89 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh-hcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL-STTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~-s~s~~~~~~~~~~ 79 (159)
+++|++|++.+++.+. + + +.+||....+||+.++..+ ...|..
T Consensus 91 t~g~t~al~~~~~~~~-----~---------------------~---gd~Vl~~~~~~~~~~~~~~~~~~g~~------- 134 (393)
T 1vjo_A 91 SGTGTAAMEATIANAV-----E---------------------P---GDVVLIGVAGYFGNRLVDMAGRYGAD------- 134 (393)
T ss_dssp SSCHHHHHHHHHHHHC-----C---------------------T---TCEEEEEESSHHHHHHHHHHHHTTCE-------
T ss_pred eCchHHHHHHHHHhcc-----C---------------------C---CCEEEEEcCChhHHHHHHHHHHcCCc-------
Confidence 4789999999998762 1 1 4589999999999533221 111211
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.+.. . ..+ +++|++.+... ++.+|++++.+...|.+.+ +++|.++|++
T Consensus 135 ----~~~v~~~~~---~-----~~d------~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 187 (393)
T 1vjo_A 135 ----VRTISKPWG---E-----VFS------LEELRTALETH-----RPAILALVHAETSTGARQP----LEGVGELCRE 187 (393)
T ss_dssp ----EEEEECCTT---C-----CCC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CTTHHHHHHH
T ss_pred ----eEEEecCCC---C-----CCC------HHHHHHHHhhC-----CceEEEEeccCCCcceecc----HHHHHHHHHH
Confidence 112232210 0 012 56677777642 4668999999988898765 6788888863
No 105
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=96.46 E-value=0.0059 Score=48.21 Aligned_cols=79 Identities=13% Similarity=0.101 Sum_probs=49.1
Q ss_pred CceEEEEcCCCCccchhhhhcCCCccccccCCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCC
Q psy4805 48 NLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTP 127 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~ 127 (159)
..+|+....+||+....+... |.. +..+|... .+. .+ ++++++.+... +
T Consensus 116 gd~Vl~~~~~y~~~~~~~~~~-g~~-----------~~~v~~~~---~~~-----~d------~~~l~~~i~~~-----~ 164 (369)
T 3cq5_A 116 GRTALGFQPSYSMHPILAKGT-HTE-----------FIAVSRGA---DFR-----ID------MDVALEEIRAK-----Q 164 (369)
T ss_dssp TCEEEEEESSCTHHHHHHHHT-TCE-----------EEEEECCT---TSS-----CC------HHHHHHHHHHH-----C
T ss_pred CCEEEEcCCChHHHHHHHHHc-CCE-----------EEEecCCc---CCC-----CC------HHHHHHHhhcc-----C
Confidence 458999999999887644332 211 11122211 000 12 56677776542 4
Q ss_pred eEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 128 VAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 128 vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+.+|+++..+...|.+. |.+.+++|.+.|+
T Consensus 165 ~~~v~~~~~~nptG~~~-~~~~l~~l~~~~~ 194 (369)
T 3cq5_A 165 PDIVFVTTPNNPTGDVT-SLDDVERIINVAP 194 (369)
T ss_dssp CSEEEEESSCTTTCCCC-CHHHHHHHHHHCS
T ss_pred CCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC
Confidence 67888988888888765 6888888888764
No 106
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=96.46 E-value=0.0012 Score=53.03 Aligned_cols=98 Identities=11% Similarity=-0.009 Sum_probs=61.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ...|+....+||+....+.. .|..
T Consensus 108 ~g~~~al~~~~~~l~--------~------------------~---gd~Vl~~~~~~~~~~~~~~~-~g~~--------- 148 (406)
T 1xi9_A 108 AAVTEALQLIFGALL--------D------------------P---GDEILVPGPSYPPYTGLVKF-YGGK--------- 148 (406)
T ss_dssp SHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCHHHHHHHHH-TTCE---------
T ss_pred CChHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCCccHHHHHHH-cCCE---------
Confidence 678999999988651 1 1 45899999999987654432 2211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ +++|++.+. .++.+|+++..+...|++ +|++++++|.++|++
T Consensus 149 --~~~v~~~~~-~~~~-----~d------~~~l~~~l~------~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~ 205 (406)
T 1xi9_A 149 --PVEYRTIEE-EDWQ-----PD------IDDIRKKIT------DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGE 205 (406)
T ss_dssp --EEEEEEEGG-GTSE-----EC------HHHHHHHCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEeecCCC-cCCc-----CC------HHHHHHhhC------cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHH
Confidence 111221100 0000 02 556666653 257888898888888875 578999999999974
No 107
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=96.38 E-value=0.0018 Score=52.35 Aligned_cols=39 Identities=10% Similarity=0.197 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|++|+++...|.+.+ +++|.++|++
T Consensus 130 ~~~l~~~i~------~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~ 168 (412)
T 2cb1_A 130 PEAVREALS------AKTRAVFVETVANPALLVPD----LEALATLAEE 168 (412)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHHhc------cCCeEEEEeCCCCCCccccc----HHHHHHHHHH
Confidence 345555553 36889999999998888764 8999999974
No 108
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=96.38 E-value=0.0087 Score=47.43 Aligned_cols=104 Identities=7% Similarity=-0.019 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.++++.... . + ...|+....+|++........ |..
T Consensus 101 t~g~~~a~~~~~~~~~~~------~------------------~---gd~vl~~~p~~~~~~~~~~~~-g~~-------- 144 (397)
T 3fsl_A 101 TLGGSGALKVGADFLKRY------F------------------P---ESGVWVSDPTWENHVAIFAGA-GFE-------- 144 (397)
T ss_dssp ESHHHHHHHHHHHHHHHH------C------------------T---TCCEEEESSCCHHHHHHHHHT-TCC--------
T ss_pred cCCcHHHHHHHHHHHHhc------C------------------C---CCeEEEeCCCchhHHHHHHHc-CCc--------
Confidence 367899999999876544 1 1 457999999999875443332 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+ . .+ ++++++.+.+. ..+..++++...+...|++ .+.+.+++|.++|++
T Consensus 145 ---~~~~~~~~~-~~~--~---~d------~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~ 204 (397)
T 3fsl_A 145 ---VSTYPWYDE-ATN--G---VR------FNDLLATLKTL---QAGSIVLLHPCCHNPTGAD-LTNDQWDAVIEILKA 204 (397)
T ss_dssp ---EEEECCEET-TTT--E---EC------HHHHHHHHTTC---CTTCEEEECSSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---eEEEeeeec-cCC--c---Cc------HHHHHHHHHhC---CCCCEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHh
Confidence 111222000 000 0 12 56777777643 2456777777777777864 577889999999974
No 109
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=96.36 E-value=0.0022 Score=51.10 Aligned_cols=95 Identities=9% Similarity=-0.025 Sum_probs=60.0
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh-hhhcCCCccccccCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG-CLSTTHSKYIHKIDIP 80 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g-a~s~s~~~~~~~~~~~ 80 (159)
+||++|++.+++.. + . + +..||....+||+.... .+...|..
T Consensus 69 ~s~t~al~~~~~~l--~------~------------------~---gd~Vl~~~~~~~~~~~~~~~~~~g~~-------- 111 (416)
T 3isl_A 69 GTSRAGIEAVLASV--I------E------------------P---EDDVLIPIYGRFGYLLTEIAERYGAN-------- 111 (416)
T ss_dssp SCHHHHHHHHHHHH--C------C------------------T---TCEEEEEESSHHHHHHHHHHHHTTCE--------
T ss_pred CcHHHHHHHHHHHh--c------C------------------C---CCEEEEecCCcccHHHHHHHHhcCCe--------
Confidence 57889999998754 1 1 2 46899999999985432 22222211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .. .| +++|++.+.+. ++.+|+++..+...|.+.+ +++|.++|++
T Consensus 112 ---~~~v~~~~~-~~-------~d------~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 164 (416)
T 3isl_A 112 ---VHMLECEWG-TV-------FD------PEDIIREIKKV-----KPKIVAMVHGETSTGRIHP----LKAIGEACRT 164 (416)
T ss_dssp ---EEEEECCTT-CC-------CC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CHHHHHHHHH
T ss_pred ---eEEEecCCC-CC-------CC------HHHHHHHHhhC-----CCcEEEEEccCCCCceecC----HHHHHHHHHH
Confidence 112332210 00 12 56677777642 4689999999998897765 7888888874
No 110
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=96.35 E-value=0.0034 Score=50.19 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=24.2
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|++++++...|.+.+ +++|.++|++
T Consensus 165 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 193 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHD----MQALTALSHE 193 (416)
T ss_dssp TEEEEEEESBCTTTCBBCC----HHHHHHHHHH
T ss_pred CceEEEEeccccCcccccC----HHHHHHHHHH
Confidence 6789999999988888765 7889998874
No 111
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=96.34 E-value=0.0026 Score=50.40 Aligned_cols=97 Identities=11% Similarity=0.098 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh-cCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS-TTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s-~s~~~~~~~~~~ 79 (159)
+++|++|++.+++.. . . + ...||....+||+.....+. ..|.
T Consensus 65 t~g~t~a~~~~~~~~--~------~------------------~---gd~Vl~~~~~~~~~~~~~~~~~~g~-------- 107 (392)
T 2z9v_A 65 HGEPVLGLEAAAASL--I------S------------------P---DDVVLNLASGVYGKGFGYWAKRYSP-------- 107 (392)
T ss_dssp SSCTHHHHHHHHHHH--C------C------------------T---TCCEEEEESSHHHHHHHHHHHHHCS--------
T ss_pred eCCchHHHHHHHHHh--c------C------------------C---CCEEEEecCCcccHHHHHHHHHcCC--------
Confidence 478999999999876 1 1 1 35799999999987422211 0111
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.... . . .+ +++|++.+++. .++.+|++++.+...|.+.+ +++|.++|++
T Consensus 108 ---~~~~v~~~~~-~----~---~d------~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 162 (392)
T 2z9v_A 108 ---HLLEIEVPYN-E----A---ID------PQAVADMLKAH----PEITVVSVCHHDTPSGTINP----IDAIGALVSA 162 (392)
T ss_dssp ---CEEEEECCTT-S----C---CC------HHHHHHHHHHC----TTCCEEEEESEEGGGTEECC----HHHHHHHHHH
T ss_pred ---ceEEeeCCCC-C----C---CC------HHHHHHHHhcC----CCCcEEEEeccCCCCceecc----HHHHHHHHHH
Confidence 1122332110 0 0 12 56677777642 35678999999988887765 7899999874
No 112
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=96.33 E-value=0.0053 Score=50.49 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=63.0
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
+||++|++.|++... . + ...||+..+..|+.+...+.+++.. +.... .
T Consensus 90 ~sGt~Ai~~al~al~--------~------------------~---Gd~Vl~~~~~~y~~~~~~~~l~g~~--~~~~~-~ 137 (431)
T 3ht4_A 90 ISGTHAISTALFGIL--------R------------------P---GDELLYITGKPYDTLEEIVGVRGKG--VGSFK-E 137 (431)
T ss_dssp CSHHHHHHHHHHTTC--------C------------------T---TCEEEECSSSCCTTHHHHTTSSSCS--SSCSG-G
T ss_pred eCHHHHHHHHHHHhC--------C------------------C---CCEEEEeCCCCchhHHHHHhhcccc--cchHH-H
Confidence 589999999985321 1 2 3578888877888888877777641 11100 0
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+...+..|.... . ..| +++|++.+. .++.+|++|+..+ ..|. ..+...+++|.++|++
T Consensus 138 ~G~~~~~v~~~~~-~-----~~d------~e~l~~~l~------~~tk~V~i~~sp~np~~~-~~~~~~l~~i~~la~~ 197 (431)
T 3ht4_A 138 YNIGYNAVPLTEG-G-----LVD------FEAVAAAIH------SNTKMIGIQRSKGYATRP-SFTISQIKEMIAFVKE 197 (431)
T ss_dssp GTCEEEECCBCTT-S-----SBC------HHHHHHHCC------TTEEEEEEECSCTTSSSC-CCCHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCC-C-----CcC------HHHHHhhcC------CCCeEEEEECCCCCCCCC-cCCHHHHHHHHHHHHh
Confidence 1111122221000 0 012 566666653 3689999996333 3343 5678899999999974
No 113
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=96.31 E-value=0.0046 Score=49.14 Aligned_cols=99 Identities=10% Similarity=0.124 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . +| +..||....+||+....+... |..
T Consensus 105 ~~g~~~al~~~~~~l~--------~------------------~g--~d~vl~~~p~~~~~~~~~~~~-g~~-------- 147 (398)
T 3ele_A 105 TMGAAASLSICFRALT--------S------------------DA--YDEFITIAPYFPEYKVFVNAA-GAR-------- 147 (398)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------ST--TCEEEEESSCCTHHHHHHHHT-TCE--------
T ss_pred ccCHHHHHHHHHHHHc--------C------------------CC--CCEEEEeCCCchhhHHHHHHc-CCE--------
Confidence 3678999999988651 1 23 478999999999876544332 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+. .+ +++|++.+. .++.+|++...+...|.+. |.+.+++|.++|++
T Consensus 148 ---~~~v~~~~~--~~~-----~d------~~~l~~~l~------~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~ 203 (398)
T 3ele_A 148 ---LVEVPADTE--HFQ-----ID------FDALEERIN------AHTRGVIINSPNNPSGTVY-SEETIKKLSDLLEK 203 (398)
T ss_dssp ---EEEECCCTT--TSS-----CC------HHHHHHTCC------TTEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHH
T ss_pred ---EEEEecCCc--CCc-----CC------HHHHHHHhC------cCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHHHh
Confidence 111222100 000 02 456665543 3577888876677778754 66779999999963
No 114
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=96.29 E-value=0.0033 Score=50.15 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. .++.+|+++..+...|.+. +++.+++|.++|++
T Consensus 157 ~~~l~~~~~------~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~ 198 (410)
T 3e2y_A 157 PRELESKFS------SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVK 198 (410)
T ss_dssp HHHHHTTCC------TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHH
T ss_pred HHHHHhhcC------CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHH
Confidence 455555442 3688999998888888765 77889999999974
No 115
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=96.28 E-value=0.0012 Score=52.06 Aligned_cols=97 Identities=6% Similarity=0.001 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhc---CCCcccccc
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLST---THSKYIHKI 77 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~---s~~~~~~~~ 77 (159)
+++|++|++.+++..+ . . + +.+||....+||+.......+ .|..
T Consensus 82 ~~g~t~a~~~~~~~~~-~------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~~~g~~----- 128 (390)
T 1elu_A 82 TDNVTTGCDIVLWGLD-W------H------------------Q---GDEILLTDCEHPGIIAIVQAIAARFGIT----- 128 (390)
T ss_dssp ESSHHHHHHHHHHHSC-C------C------------------T---TCEEEEETTCCHHHHHHHHHHHHHHCCE-----
T ss_pred eCChHHHHHHHHhCCC-C------C------------------C---CCEEEEecCcccHHHHHHHHHHHHhCcE-----
Confidence 3689999999998763 1 1 1 468999999999976442221 1211
Q ss_pred CCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 78 DIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 78 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+..+|.+.. ..+ ..+ ++.|++.+. +++.+|++++.+...|.+.+ +++|.++|
T Consensus 129 ------~~~v~~~~~-~~~-----~~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----~~~i~~l~ 180 (390)
T 1elu_A 129 ------YRFFPVAAT-LNQ-----GDA------AAVLANHLG------PKTRLVILSHLLWNTGQVLP----LAEIMAVC 180 (390)
T ss_dssp ------EEEECCGGG-SSS-----SCH------HHHHHTTCC------TTEEEEEEESBCTTTCCBCC----HHHHHHHH
T ss_pred ------EEEEcCCCC-CCc-----cch------HHHHHHhcC------CCceEEEEeccccCCceecC----HHHHHHHH
Confidence 111222100 000 012 455555442 36899999999988898766 88999999
Q ss_pred c
Q psy4805 158 K 158 (159)
Q Consensus 158 ~ 158 (159)
+
T Consensus 181 ~ 181 (390)
T 1elu_A 181 R 181 (390)
T ss_dssp H
T ss_pred h
Confidence 7
No 116
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=96.28 E-value=0.0076 Score=47.07 Aligned_cols=99 Identities=8% Similarity=-0.057 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhc--CCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLST--THSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~--s~~~~~~~~~ 78 (159)
+++|++|++.|++....++.. + ...||.....|++.......+ .|.
T Consensus 66 ~~g~~~a~~~~~~~~~~~~~~----------------------~---gd~vi~~~~~~~~~~~~~~~~~~~g~------- 113 (382)
T 4hvk_A 66 TSGATEANNLAIIGYAMRNAR----------------------K---GKHILVSAVEHMSVINPAKFLQKQGF------- 113 (382)
T ss_dssp ESSHHHHHHHHHHHHHHHHGG----------------------G---CCEEEEETTCCHHHHHHHHHHHHTTC-------
T ss_pred ECCchHHHHHHHHHhhhhhcC----------------------C---CCEEEECCCCcHHHHHHHHHHHhcCC-------
Confidence 468899999999976543211 1 457888888888765433222 111
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+..+|... .. . .| +++|++.+. .+..+|+++..+...|.+.+ +++|.++|+
T Consensus 114 ----~~~~v~~~~-~~----~---~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----~~~i~~l~~ 165 (382)
T 4hvk_A 114 ----EVEYIPVGK-YG----E---VD------VSFIDQKLR------DDTILVSVQHANNEIGTIQP----VEEISEVLA 165 (382)
T ss_dssp ----EEEEECBCT-TS----C---BC------HHHHHHHCC------TTEEEEECCSBCTTTCBBCC----HHHHHHHHS
T ss_pred ----EEEEeccCC-CC----C---cC------HHHHHHHhc------cCceEEEEECCCCCceeeCC----HHHHHHHHH
Confidence 111222211 00 0 12 456666553 36789999999988887765 778999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 166 ~ 166 (382)
T 4hvk_A 166 G 166 (382)
T ss_dssp S
T ss_pred H
Confidence 5
No 117
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=96.27 E-value=0.0059 Score=49.93 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++++++++.+++.... ++.++.+||....+||+......++.......-..
T Consensus 134 t~g~t~al~~~~~~~~~--------------------------~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~-- 185 (465)
T 3e9k_A 134 MNALTVNLHLLMLSFFK--------------------------PTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE-- 185 (465)
T ss_dssp CSCHHHHHHHHHHHHCC--------------------------CCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH--
T ss_pred ECCHHHHHHHHHHHhcc--------------------------ccCCCCEEEEcCCcCCchHHHHHHHHHHcCCccee--
Confidence 46888888888875521 12136789999999999776443322100000000
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
......|.+. ... .+ +++|++.|+++ .+++++|+++.++...|.+.+ +++|.++|++
T Consensus 186 -~~v~~~~~~~-~~~-------~d------~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~ 242 (465)
T 3e9k_A 186 -SMRMIKPREG-EET-------LR------IEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN----IPAITKAGQA 242 (465)
T ss_dssp -HEEEECCCTT-CSS-------CC------HHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC----HHHHHHHHHH
T ss_pred -eeEEEecCCC-CCc-------cC------HHHHHHHHHhc---CCCeEEEEEeCcccCcceeec----HHHHHHHHHH
Confidence 0000112111 000 12 56777788764 247999999999999998865 6888888864
No 118
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=96.26 E-value=0.005 Score=48.85 Aligned_cols=101 Identities=9% Similarity=-0.032 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCc-eEEEEcCCCCccchhhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNL-SILSFKGAFHGRTLGCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~-~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~ 79 (159)
+++|++|++.+++....++... .. .||.....|++.......+....
T Consensus 86 ~~g~t~al~~~~~~l~~~~~~~-------------------------gd~~Vl~~~~~~~~~~~~~~~~~~~g------- 133 (400)
T 3vax_A 86 TSGATESNNIALLGLAPYGERT-------------------------GRRHIITSAIEHKAVLEPLEHLAGRG------- 133 (400)
T ss_dssp ESCHHHHHHHHHHTTHHHHHHH-------------------------TCCEEEEETTSCHHHHHHHHHHHTTT-------
T ss_pred eCCHHHHHHHHHHHHHHhhccC-------------------------CCCEEEECccccHhHHHHHHHHHhcC-------
Confidence 3688999999999886553221 34 78887777776543332221100
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
..+..+|... . . . .| +++|++.+. ++..+|++++++...|.+.+ +++|.++|++
T Consensus 134 --~~~~~v~~~~-~--~--~---~d------~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 187 (400)
T 3vax_A 134 --FEVDFLTPGP-S--G--R---IS------VEGVMERLR------PDTLLVSLMHVNNETGVIQP----VAELAQQLRA 187 (400)
T ss_dssp --CEEEEECCCT-T--C--C---CC------HHHHHTTCC------TTEEEEECCSBCTTTCBBCC----HHHHHHHHTT
T ss_pred --CeEEEEccCC-C--C--C---cC------HHHHHHhcC------CCceEEEEECCCCCceeeCc----HHHHHHHHHh
Confidence 0111222211 0 0 0 12 455655543 36789999999998898765 6899999975
No 119
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=96.26 E-value=0.0022 Score=50.93 Aligned_cols=103 Identities=9% Similarity=-0.026 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++..... |. +.+ +..||....+||+....+......
T Consensus 97 t~g~~~al~~~~~~~~~~------g~----------------~~~--~d~vl~~~p~~~~~~~~~~~~g~~--------- 143 (396)
T 3jtx_A 97 VLGSREALFSFVQTVLNP------VS----------------DGI--KPAIVSPNPFYQIYEGATLLGGGE--------- 143 (396)
T ss_dssp ESSHHHHHHHHHHHHCCC-------------------------CC--CCEEEEEESCCHHHHHHHHHTTCE---------
T ss_pred cCCcHHHHHHHHHHHhCC------CC----------------ccC--CCEEEEcCCCcHhHHHHHHHcCCE---------
Confidence 367889999998876321 10 001 368999999999887654433221
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|....... .| +++|++.+.. ++.+|+++..+...|.+. |.+.+++|.++|++
T Consensus 144 ---~~~v~~~~~g~~-------~d------~~~l~~~~~~------~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~ 199 (396)
T 3jtx_A 144 ---IHFANCPAPSFN-------PD------WRSISEEVWK------RTKLVFVCSPNNPSGSVL-DLDGWKEVFDLQDK 199 (396)
T ss_dssp ---EEEEECCTTTCC-------CC------GGGSCHHHHH------TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHH
T ss_pred ---EEEeecCCCCCc-------cC------HHHHHHhhcc------CcEEEEEECCCCCCCCcC-CHHHHHHHHHHHHH
Confidence 111222110000 01 3344555543 466777765577778754 66779999999974
No 120
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=96.25 E-value=0.0033 Score=49.47 Aligned_cols=40 Identities=8% Similarity=0.194 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.. .++.+|++++.+...|.+.+ +++|.++|++
T Consensus 126 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~ 165 (385)
T 2bkw_A 126 LELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD----LKAISQAIKQ 165 (385)
T ss_dssp HHHHHHHHHH-----SCCSEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred HHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC----HHHHHHHHHh
Confidence 5667777764 25678999999998898765 7788888874
No 121
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.24 E-value=0.0038 Score=49.79 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...|+....+||+....+. ..|..
T Consensus 107 ~~g~t~al~~~~~~l~--------~------------------~---gd~Vl~~~~~~~~~~~~~~-~~g~~-------- 148 (389)
T 1o4s_A 107 TNGAKQALFNAFMALL--------D------------------P---GDEVIVFSPVWVSYIPQII-LAGGT-------- 148 (389)
T ss_dssp ESHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCTTHHHHHH-HTTCE--------
T ss_pred ecCHHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCchhHHHHHH-HcCCE--------
Confidence 3678899999987651 1 1 4579999999999765432 22211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ +++|++.+. .++.+|+++..+...|.+ +|++++++|.++|++
T Consensus 149 ---~~~v~~~~~-~~~~-----~d------~~~l~~~l~------~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~ 205 (389)
T 1o4s_A 149 ---VNVVETFMS-KNFQ-----PS------LEEVEGLLV------GKTKAVLINSPNNPTGVV-YRREFLEGLVRLAKK 205 (389)
T ss_dssp ---EEEEECCGG-GTTC-----CC------HHHHHHTCC------TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEEecCCc-cCCC-----CC------HHHHHHhcc------cCceEEEEcCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 111222100 0000 02 455655543 257888888777777875 578999999999974
No 122
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.22 E-value=0.00064 Score=54.70 Aligned_cols=32 Identities=19% Similarity=0.144 Sum_probs=26.5
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|+++..+...|.+ +|++++++|.++|++
T Consensus 174 ~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~ 205 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAER 205 (409)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHH
Confidence 67888888888778876 467999999999974
No 123
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.20 E-value=0.01 Score=47.25 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ++.+||+. +++.|.+.+ +++|+++|++
T Consensus 153 ~~~l~~~i~~~-----~~~~v~~~--~~~~G~~~~----l~~i~~l~~~ 190 (417)
T 3n0l_A 153 YEKVREIAKKE-----KPKLIVCG--ASAYARVID----FAKFREIADE 190 (417)
T ss_dssp HHHHHHHHHHH-----CCSEEEEC--CSSCCSCCC----HHHHHHHHHH
T ss_pred HHHHHHHHHhc-----CCeEEEEC--CcccCccCC----HHHHHHHHHH
Confidence 56777777642 34566643 334576554 8999999974
No 124
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=96.19 E-value=0.0031 Score=49.75 Aligned_cols=86 Identities=9% Similarity=0.004 Sum_probs=54.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+|+....+||+....+.. .|..
T Consensus 95 ~~g~~~a~~~~~~~~~--------~------------------~---gd~vl~~~p~~~~~~~~~~~-~g~~-------- 136 (370)
T 2z61_A 95 TGGSSLGLFFALSSII--------D------------------D---GDEVLIQNPCYPCYKNFIRF-LGAK-------- 136 (370)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEEESSCCTHHHHHHHH-TTCE--------
T ss_pred CCChHHHHHHHHHHhc--------C------------------C---CCEEEEeCCCchhHHHHHHH-cCCE--------
Confidence 3688999999998751 1 1 35899999999997655432 2211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.++.| . + +++|++.+. .++.+|+++..+...|.+.+.+ |.++|+
T Consensus 137 -----~~~v~-----~-------d------~~~l~~~l~------~~~~~v~~~~p~nptG~~~~~~-----l~~~~~ 180 (370)
T 2z61_A 137 -----PVFCD-----F-------T------VESLEEALS------DKTKAIIINSPSNPLGEVIDRE-----IYEFAY 180 (370)
T ss_dssp -----EEEEC-----S-------S------HHHHHHHCC------SSEEEEEEESSCTTTCCCCCHH-----HHHHHH
T ss_pred -----EEEeC-----C-------C------HHHHHHhcc------cCceEEEEcCCCCCcCcccCHH-----HHHHHH
Confidence 11111 0 1 455655543 2677888887777788876554 777775
No 125
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=96.13 E-value=0.0096 Score=47.99 Aligned_cols=100 Identities=8% Similarity=-0.047 Sum_probs=59.5
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ...|+....+||+....+....|..
T Consensus 120 ~g~~~al~~~~~~l~--------~------------------~---gd~Vl~~~p~y~~~~~~~~~~~g~~--------- 161 (430)
T 2x5f_A 120 NALTHGLSLVGDLFV--------N------------------Q---DDTILLPEHNWGNYKLVFNTRNGAN--------- 161 (430)
T ss_dssp SHHHHHHHHHHHHHC--------C------------------T---TCEEEEESSCCTHHHHHHTTTTCCE---------
T ss_pred CCchHHHHHHHHHHh--------C------------------C---CCEEEEcCCcCccHHHHHHHhcCCe---------
Confidence 577899999888541 1 2 3579999999999765443302211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCe-EEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPV-AGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~v-AAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|..... +. .+ +++|++.+... +.+. +.+|..| +...|.+ +|.+++++|.++|++
T Consensus 162 --~~~~~~~~~~--~~-----~d------~~~l~~~l~~~---~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~ 220 (430)
T 2x5f_A 162 --LQTYPIFDKD--GH-----YT------TDSLVEALQSY---NKDKVIMILNYP-NNPTGYT-PTHKEVTTIVEAIKA 220 (430)
T ss_dssp --EEEECCBCTT--SC-----BC------SHHHHHHHHHC---CSSEEEEEECSS-CTTTCCC-CCHHHHHHHHHHHHH
T ss_pred --EEEEeccCcc--CC-----cC------HHHHHHHHHhc---CCCCEEEEEcCC-CCCCCCc-CCHHHHHHHHHHHHh
Confidence 1112221100 10 12 45667777653 2244 4566677 7667864 688999999999974
No 126
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=96.12 E-value=0.035 Score=46.20 Aligned_cols=115 Identities=15% Similarity=0.027 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHHHHHHHh--hcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQN--KQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKID 78 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~ 78 (159)
+++||||+..|++.+|.++.. +..|. .+.++..|+.-.. .|.....++.+.+... .
T Consensus 171 t~ggtea~~~al~~ar~~~~~~~~~~G~-----------------~~~~~~~vl~s~~-~h~s~~~~~~~~g~g~-~--- 228 (515)
T 2jis_A 171 CPGGSISNMYAVNLARYQRYPDCKQRGL-----------------RTLPPLALFTSKE-CHYSIQKGAAFLGLGT-D--- 228 (515)
T ss_dssp ESSHHHHHHHHHHHHHHHHCTTHHHHCG-----------------GGSCCEEEEEETT-SCTHHHHHHHHTTSCG-G---
T ss_pred cCCcHHHHHHHHHHHHHHHhhHHhhcCc-----------------cccCCeEEEECCC-ccHHHHHHHHHcCCCC-C---
Confidence 368999999999999876410 00020 0001335555554 4666665555544310 0
Q ss_pred CCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 79 IPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 79 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.+..+|... . +. -+ +++|++.|......+..+.+|++.......|.+.+ +++|.++|+
T Consensus 229 ----~v~~v~~~~-~--~~-----~d------~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~ 286 (515)
T 2jis_A 229 ----SVRVVKADE-R--GK-----MV------PEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEAIADVCQ 286 (515)
T ss_dssp ----GEEEECBCT-T--SC-----BC------HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHH
T ss_pred ----cEEEEecCC-C--Cc-----CC------HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHHHHHHHH
Confidence 112233211 0 00 12 45666666542111235889999887777787754 789999997
Q ss_pred C
Q psy4805 159 K 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 287 ~ 287 (515)
T 2jis_A 287 R 287 (515)
T ss_dssp H
T ss_pred H
Confidence 4
No 127
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=96.09 E-value=0.0031 Score=49.11 Aligned_cols=97 Identities=8% Similarity=0.100 Sum_probs=56.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh-cCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS-TTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s-~s~~~~~~~~~~ 79 (159)
+++|++|++.|++.++. + +.+||.+...||+.++..+. ..|.
T Consensus 62 ~~g~t~a~~~~~~~~~~--------------------------~---gd~vi~~~~~~~~~~~~~~~~~~g~-------- 104 (366)
T 1m32_A 62 QGSGSYAVEAVLGSALG--------------------------P---QDKVLIVSNGAYGARMVEMAGLMGI-------- 104 (366)
T ss_dssp ESCHHHHHHHHHHHSCC--------------------------T---TCCEEEEESSHHHHHHHHHHHHHTC--------
T ss_pred ecChHHHHHHHHHHhcC--------------------------C---CCeEEEEeCCCccHHHHHHHHHhCC--------
Confidence 47899999999987621 1 34688888899987543221 1111
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.... . ..+ +++|++.+... .++.+|++.......|.+.+ +++|.++|++
T Consensus 105 ---~~~~v~~~~~---~-----~~d------~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 159 (366)
T 1m32_A 105 ---AHHAYDCGEV---A-----RPD------VQAIDAILNAD----PTISHIAMVHSETTTGMLNP----IDEVGALAHR 159 (366)
T ss_dssp ---CEEEEECCTT---S-----CCC------HHHHHHHHHHC----TTCCEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred ---ceEEEeCCCC---C-----CCC------HHHHHHHHhcC----CCeEEEEEecccCCcceecC----HHHHHHHHHH
Confidence 1112232110 0 012 56677777652 24556666555555677665 7899999874
No 128
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=96.08 E-value=0.006 Score=48.48 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.. +..+||++..+...|.+ +|++++++|.++|++
T Consensus 169 ~~~l~~~l~~------~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~ 210 (407)
T 3nra_A 169 LTGLEEAFKA------GARVFLFSNPNNPAGVV-YSAEEIGQIAALAAR 210 (407)
T ss_dssp HHHHHHHHHT------TCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh------CCcEEEEcCCCCCCCcc-cCHHHHHHHHHHHHH
Confidence 5677777753 33445444446767864 578899999999974
No 129
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=96.01 E-value=0.0024 Score=49.66 Aligned_cols=30 Identities=10% Similarity=-0.033 Sum_probs=25.4
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++.+|++++.++..|.+.+ +++|.++|++
T Consensus 82 ~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~ 111 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVID----IEDAVKQARK 111 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHTT
T ss_pred CCCeEEEEECCCCCcCcccC----HHHHHHHHhh
Confidence 36889999999998898774 8999999975
No 130
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=95.97 E-value=0.01 Score=48.63 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+|||....... .|..
T Consensus 146 t~G~~~al~~~~~~l~--------~------------------~---Gd~Vlv~~p~y~~~~~~~~~-~g~~-------- 187 (448)
T 3aow_A 146 TSGSQQALDLIGRVFL--------N------------------P---GDIVVVEAPTYLAALQAFNF-YEPQ-------- 187 (448)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCHHHHHHHHT-TCCE--------
T ss_pred eCcHHHHHHHHHHHHc--------C------------------C---CCEEEEeCCChHHHHHHHHH-cCCE--------
Confidence 3678899999988751 1 2 36899999999997654332 2211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . . .+ +++|++.+........++.+|++.|. +.-.|.+ .|.+++++|.++|++
T Consensus 188 ---~~~v~~~~----~--g---~d------~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~ 248 (448)
T 3aow_A 188 ---YIQIPLDD----E--G---MK------VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASE 248 (448)
T ss_dssp ---EEEEEEET----T--E---EC------HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEeccCC----C--C---CC------HHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHH
Confidence 11122210 0 0 12 45666666511000236888877774 5556765 678999999999974
No 131
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=95.95 E-value=0.0062 Score=48.41 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEE-cccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVV-EPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~-EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ++.+||+ +|..| .+ .+ +++|.++|++
T Consensus 152 ~~~l~~~l~~~-----~~~~v~~~~p~~~---~~-~~---l~~i~~l~~~ 189 (407)
T 2dkj_A 152 LEEVRRLALEH-----RPKVIVAGASAYP---RF-WD---FKAFREIADE 189 (407)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCSSCC---SC-CC---HHHHHHHHHH
T ss_pred HHHHHHHHhhc-----CCeEEEEeccccC---CC-CC---HHHHHHHHHH
Confidence 56677777642 4567777 78875 33 33 8999999974
No 132
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=95.94 E-value=0.0018 Score=53.56 Aligned_cols=103 Identities=17% Similarity=0.057 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|+||+..|++.+|.+..++ +|. .+..||.-.. .|.....++...|..
T Consensus 132 ~~ggt~a~~~a~~a~~~~~~~~-~g~--------------------~~~~Vi~~~~-~h~~~~~~~~~~G~~-------- 181 (497)
T 3mc6_A 132 TSGGTESLLLACLSAKMYALHH-RGI--------------------TEPEIIAPVT-AHAGFDKAAYYFGMK-------- 181 (497)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHH-SCC--------------------SSCEEEEETT-SCHHHHHHHHHSCCE--------
T ss_pred cCcHHHHHHHHHHHHHHHHHhc-CCC--------------------CCceEEEeCC-ccHHHHHHHHHcCCe--------
Confidence 4789999999999999886543 121 2455666554 455555555544421
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|..... +. .| +++|++.+. .++++|+++..+...|.+.+ +++|.++|++
T Consensus 182 ---~~~v~~~~~~--~~-----~d------~~~l~~~i~------~~~~~v~~~~p~nptG~~~~----l~~i~~la~~ 234 (497)
T 3mc6_A 182 ---LRHVELDPTT--YQ-----VD------LGKVKKFIN------KNTVLLVGSAPNFPHGIADD----IEGLGKIAQK 234 (497)
T ss_dssp ---EEEECBCTTT--CS-----BC------TTTTGGGCC------SSEEEEEEETTCTTTCCCCS----CTTTTTHHHH
T ss_pred ---EEEEecCccc--Cc-----CC------HHHHHHHHh------hCCEEEEEECCCCCCCcCCC----HHHHHHHHHH
Confidence 1123321100 00 01 334444442 36789999988887888755 5677777763
No 133
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=95.85 E-value=0.0015 Score=52.95 Aligned_cols=99 Identities=15% Similarity=0.058 Sum_probs=59.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++.... + ...|+....+|++....+......
T Consensus 124 t~g~t~al~~~~~~l~~--------------------------~---gd~vl~~~p~~~~~~~~~~~~g~~--------- 165 (427)
T 3dyd_A 124 TSGCSQAIDLCLAVLAN--------------------------P---GQNILVPRPGFSLYKTLAESMGIE--------- 165 (427)
T ss_dssp ESSHHHHHHHHHHHHCC--------------------------T---TCEEEEEESCCTHHHHHHHHTTCE---------
T ss_pred ecCcHHHHHHHHHHhcC--------------------------C---CCEEEEcCCCchhHHHHHHHcCCE---------
Confidence 46889999999987621 1 457999999999876544433211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+ . .| ++++++.+. .+..++++...+...|+ .+|++++++|.++|++
T Consensus 166 ---~~~~~~~~~-~~~--~---~d------~~~l~~~l~------~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~ 222 (427)
T 3dyd_A 166 ---VKLYNLLPE-KSW--E---ID------LKQLEYLID------EKTACLIVNNPSNPCGS-VFSKRHLQKILAVAAR 222 (427)
T ss_dssp ---EEEEEEEGG-GTT--E---EC------HHHHHSSCC------TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred ---EEEEecccc-cCC--C---CC------HHHHHHHhc------cCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 011121100 000 0 02 455555543 24555666555777887 4578899999999974
No 134
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=95.80 E-value=0.0047 Score=49.53 Aligned_cols=99 Identities=7% Similarity=-0.016 Sum_probs=57.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+... |..
T Consensus 105 t~g~~~a~~~~~~~~~--------~------------------~---gd~Vl~~~p~~~~~~~~~~~~-g~~-------- 146 (412)
T 2x5d_A 105 TIGSKEGLAHLMLATL--------D------------------H---GDTILVPNPSYPIHIYGAVIA-GAQ-------- 146 (412)
T ss_dssp ESCHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCHHHHHHHHHH-TCE--------
T ss_pred cCChHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCchhHHHHHHHc-CCE--------
Confidence 3688999999988641 1 1 357999999999987654332 111
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... . . +. -.+++|++.+. .++.+|++.-.+...|.+ +|.+++++|.++|++
T Consensus 147 ---~~~~~~~~~---~--~--~~-----~d~~~l~~~i~------~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 203 (412)
T 2x5d_A 147 ---VRSVPLVPG---I--D--FF-----NELERAIRESI------PKPRMMILGFPSNPTAQC-VELDFFERVVALAKQ 203 (412)
T ss_dssp ---EEEEECSTT---S--C--HH-----HHHHHHHHTEE------SCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEeecCCc---c--C--CC-----CCHHHHHHhcc------cCceEEEECCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 111222100 0 0 00 11455555442 245666664335556765 578999999999974
No 135
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=95.79 E-value=0.0037 Score=49.52 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh-hcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL-STTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~-s~s~~~~~~~~~~ 79 (159)
+++|++|++.|++... . + ...||....+||+.....+ ...|.
T Consensus 76 ~~g~t~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~g~-------- 118 (393)
T 2huf_A 76 SASGHGGMEATLCNLL--------E------------------D---GDVILIGHTGHWGDRSADMATRYGA-------- 118 (393)
T ss_dssp SSCHHHHHHHHHHHHC--------C------------------T---TCEEEEEESSHHHHHHHHHHHHTTC--------
T ss_pred cCcHHHHHHHHHHHHh--------C------------------C---CCEEEEECCCcchHHHHHHHHHcCC--------
Confidence 4789999999998761 1 2 4579999999999532111 11111
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.+..+|.... . . .+ +++|++.+... ++.+|+++..+...|.+.+ +++|.++|++
T Consensus 119 ---~~~~v~~~~~-~----~---~d------~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~----l~~i~~~~~~ 172 (393)
T 2huf_A 119 ---DVRVVKSKVG-Q----S---LS------LDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG----LEGVGALCHQ 172 (393)
T ss_dssp ---EEEEEECCTT-C----C---CC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CTTHHHHHHH
T ss_pred ---eeEEEeCCCC-C----C---CC------HHHHHHHHhcc-----CCcEEEEEccCCCccccCC----HHHHHHHHHH
Confidence 1112332110 0 0 12 56677777542 4578888898888898765 7888888864
No 136
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=95.74 E-value=0.0064 Score=48.44 Aligned_cols=96 Identities=8% Similarity=0.030 Sum_probs=59.1
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.+++... . + ..+||....+||+....+.. .|..
T Consensus 98 ~g~~~al~~~~~~~~--------~------------------~---gd~Vl~~~p~y~~~~~~~~~-~g~~--------- 138 (397)
T 2zyj_A 98 TGSQQALDLVGKVFL--------D------------------E---GSPVLLEAPSYMGAIQAFRL-QGPR--------- 138 (397)
T ss_dssp SHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCHHHHHHHHT-TCCE---------
T ss_pred ccHHHHHHHHHHHhC--------C------------------C---CCEEEEeCCCcHHHHHHHHH-cCCE---------
Confidence 577899999988651 1 1 35799999999997755432 2211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEE-EcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIV-VEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI-~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . . .+ +++|++.+.. .++.+|+ ++..+...|.+ .|.+++++|.++|++
T Consensus 139 --~~~~~~~~----~--~---~d------~~~l~~~l~~-----~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~ 194 (397)
T 2zyj_A 139 --FLTVPAGE----E--G---PD------LDALEEVLKR-----ERPRFLYLIPSFQNPTGGL-TPLPARKRLLQMVME 194 (397)
T ss_dssp --EEEEEEET----T--E---EC------HHHHHHHHHH-----CCCSCEEECCBSCTTTCCB-CCHHHHHHHHHHHHH
T ss_pred --EEecCcCC----C--C---CC------HHHHHHHHhh-----cCCeEEEECCCCcCCCCCc-CCHHHHHHHHHHHHH
Confidence 11122210 0 0 12 5667777764 1455664 44456667765 578999999999974
No 137
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=95.74 E-value=0.018 Score=47.50 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.|.. +.+.+|++|+.+...|.+.+ +++|.++|++
T Consensus 189 ~~~l~~ai~~-----~tv~lV~le~p~NptG~v~d----l~~I~~la~~ 228 (445)
T 1qgn_A 189 VGALELALNQ-----KKVNLFFTESPTNPFLRCVD----IELVSKLCHE 228 (445)
T ss_dssp HHHHHHHHHH-----SCEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred HHHHHHHhcc-----CCCCEEEEeCCCCCCCcccC----HHHHHHHHHH
Confidence 5667777764 24589999999988887764 7788888874
No 138
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=95.45 E-value=0.023 Score=44.46 Aligned_cols=96 Identities=8% Similarity=-0.078 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+|+....+||+....+......
T Consensus 90 ~~g~t~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~g~~--------- 131 (363)
T 3ffh_A 90 TAGVDELIELLTRVLL--------D------------------T---TTNTVMATPTFVQYRQNALIEGAE--------- 131 (363)
T ss_dssp ESSHHHHHHHHHHHHC--------S------------------T---TCEEEEEESSCHHHHHHHHHHTCE---------
T ss_pred eCCHHHHHHHHHHHHc--------c------------------C---CCEEEEcCCChHHHHHHHHHcCCE---------
Confidence 3689999999998641 1 1 458999999999866544332111
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... . +. .+ ++++++.+. .++.+|+++..+...|.+. |.+.++++.++|+
T Consensus 132 ---~~~v~~~~-~--~~-----~d------~~~l~~~i~------~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~ 185 (363)
T 3ffh_A 132 ---VREIPLLQ-D--GE-----HD------LEGMLNAID------EKTTIVWICNPNNPTGNYI-ELADIQAFLDRVP 185 (363)
T ss_dssp ---EEEEECCT-T--SC-----CC------HHHHHHHCC------TTEEEEEEESSCTTTCCCC-CHHHHHHHHTTSC
T ss_pred ---EEEecCCC-C--CC-----cC------HHHHHHhcc------cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCC
Confidence 11223221 0 00 12 456666552 3678888887788888754 6777888888875
No 139
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=95.41 E-value=0.015 Score=46.65 Aligned_cols=102 Identities=8% Similarity=0.048 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++....+ + +| .+.+||....+||+....+......
T Consensus 111 t~g~t~al~~~~~~l~~~---~---------------------~g-d~~~Vl~~~p~~~~~~~~~~~~g~~--------- 156 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRT---H---------------------KN-REYGTLFIDPGFNLNKLQCRILGQK--------- 156 (437)
T ss_dssp ESHHHHHHHHHHHHHTTS---C---------------------TT-CSCCEEEEESCCHHHHHHHHHHTCC---------
T ss_pred eCCHHHHHHHHHHHHhcC---C---------------------CC-CccEEEEeCCCcHhHHHHHHHcCCE---------
Confidence 367889999988866310 0 23 0127999999999876554332211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEE-cccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVV-EPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~-EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.. +.... .| +++|++.+.. .++.+|++ .| +...|.+ .|.+.+++|.++|++
T Consensus 157 ---~~~v~~~----~~~~~---~d------~~~l~~~l~~-----~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~a~~ 213 (437)
T 3g0t_A 157 ---FESFDLF----EYRGE---KL------REKLESYLQT-----GQFCSIIYSNP-NNPTWQC-MTDEELRIIGELATK 213 (437)
T ss_dssp ---CEEEEGG----GGCTT---HH------HHHHHHHHTT-----TCCCEEEEESS-CTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEEeec----CCCCc---cC------HHHHHHHHhc-----CCceEEEEeCC-CCCCCCc-CCHHHHHHHHHHHHH
Confidence 1112221 00000 12 6677777743 24455544 66 6667765 467789999999974
No 140
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=95.41 E-value=0.0082 Score=47.51 Aligned_cols=96 Identities=9% Similarity=-0.001 Sum_probs=58.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccch-hhhhcCCCccccccCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTL-GCLSTTHSKYIHKIDI 79 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~-ga~s~s~~~~~~~~~~ 79 (159)
+++|++|++.+++... . + ..+||....+||+... ......|..
T Consensus 75 ~~g~t~al~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~~~g~~------- 118 (396)
T 2ch1_A 75 SGSAHAGMEAMLSNLL--------E------------------E---GDRVLIAVNGIWAERAVEMSERYGAD------- 118 (396)
T ss_dssp SSCHHHHHHHHHHHHC--------C------------------T---TCEEEEEESSHHHHHHHHHHHHTTCE-------
T ss_pred CCcHHHHHHHHHHHhc--------C------------------C---CCeEEEEcCCcccHHHHHHHHHcCCc-------
Confidence 4789999999998761 1 2 3589999999998531 122222211
Q ss_pred CCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 80 PAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 80 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... . . ..+ +++|++.+... ++.+|+++..+...|.+.+ +++|.++|++
T Consensus 119 ----~~~v~~~~-~--~-----~~d------~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~----~~~i~~l~~~ 171 (396)
T 2ch1_A 119 ----VRTIEGPP-D--R-----PFS------LETLARAIELH-----QPKCLFLTHGDSSSGLLQP----LEGVGQICHQ 171 (396)
T ss_dssp ----EEEEECCT-T--S-----CCC------HHHHHHHHHHH-----CCSEEEEESEETTTTEECC----CTTHHHHHHH
T ss_pred ----eEEecCCC-C--C-----CCC------HHHHHHHHHhC-----CCCEEEEECCCCCCceecC----HHHHHHHHHH
Confidence 11233211 0 0 012 56677777642 4678888888888888765 7788888863
No 141
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=95.41 E-value=0.05 Score=44.96 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=26.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 112 AEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 112 ~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++|++.|.+....+..+.+|++.......|.+. .+++|.++|++
T Consensus 243 ~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~----~l~~I~~l~~~ 286 (497)
T 2qma_A 243 TKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAID----DLDFIADMAVK 286 (497)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCC----CHHHHHHHHHH
Confidence 445555554211122356788876677777753 38899999974
No 142
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=95.36 E-value=0.047 Score=42.45 Aligned_cols=97 Identities=5% Similarity=-0.068 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ...||....+||+....+... |..
T Consensus 74 ~~g~~~a~~~~~~~l~--------~------------------~---gd~vl~~~~~~~~~~~~~~~~-g~~-------- 115 (354)
T 3ly1_A 74 TAGSSEGIRAAIEAYA--------S------------------L---EAQLVIPELTYGDGEHFAKIA-GMK-------- 115 (354)
T ss_dssp ESHHHHHHHHHHHHHC--------C------------------T---TCEEEEESSSCTHHHHHHHHT-TCE--------
T ss_pred eCChHHHHHHHHHHHh--------C------------------C---CCeEEECCCCchHHHHHHHHc-CCE--------
Confidence 3678899999988541 1 1 357999999999876544322 211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHh
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIG 157 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc 157 (159)
+..+|... . +. .+ +++|++.+.++ .++.+|+++..+...|.+. |.+.+++|.++|
T Consensus 116 ---~~~~~~~~-~--~~-----~d------~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~ 170 (354)
T 3ly1_A 116 ---VTKVKMLD-N--WA-----FD------IEGLKAAVAAY----SGPSIVYLVNPNNPTGTIT-PADVIEPWIASK 170 (354)
T ss_dssp ---EEEECCCT-T--SC-----CC------HHHHHHHHHTC----SSCEEEEEESSCTTTCCCC-CHHHHHHHHHTC
T ss_pred ---EEEecCCC-C--CC-----CC------HHHHHHHhccC----CCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhC
Confidence 11122210 0 00 12 56777777641 4678888877777778755 667788888877
No 143
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=95.32 E-value=0.015 Score=45.46 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=25.5
Q ss_pred eEEEEEcccccCC-CCccCCHHHHHHHHHHhcC
Q psy4805 128 VAGIVVEPIQSEG-GDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 128 vAAvI~EPiqG~g-Gv~~pp~~fl~~lr~lc~~ 159 (159)
+.+|++++.++.. | .++|.+.+++|.++|++
T Consensus 136 ~~~v~~~~p~np~~G-~~~~~~~l~~i~~~~~~ 167 (357)
T 3lws_A 136 IACLLLELPQREIGG-VAPAFSELETISRYCRE 167 (357)
T ss_dssp CSEEEEESSBGGGTS-BCCCHHHHHHHHHHHHH
T ss_pred cceEEEEcccccCCc-eeCCHHHHHHHHHHHHH
Confidence 7789999887654 6 46789999999999974
No 144
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=95.24 E-value=0.017 Score=46.51 Aligned_cols=84 Identities=17% Similarity=0.113 Sum_probs=48.0
Q ss_pred CceEEEEcCCCCccchhhhhcCCCccccccCCCCCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhcc--CC
Q psy4805 48 NLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNK--KG 125 (159)
Q Consensus 48 r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~ 125 (159)
...|+....+||+....+.. .|.. +..+|... . . .+ +++|++.+..... .+
T Consensus 133 gd~Vl~~~p~y~~~~~~~~~-~g~~-----------~~~v~~~~----~--~---~d------~~~l~~~l~~~~~~~~~ 185 (425)
T 1vp4_A 133 ESYCVLDDPAYLGAINAFRQ-YLAN-----------FVVVPLED----D--G---MD------LNVLERKLSEFDKNGKI 185 (425)
T ss_dssp TCEEEEEESCCHHHHHHHHT-TTCE-----------EEEEEEET----T--E---EC------HHHHHHHHHHHHHTTCG
T ss_pred CCEEEEeCCCcHHHHHHHHH-cCCE-----------EEEeccCC----C--C---CC------HHHHHHHHHhhhhcccC
Confidence 35899999999997655432 2211 11122210 0 0 12 4566666654100 01
Q ss_pred CCeEEEEEcc-cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.+|++.| .+...|.+ .|.+++++|.++|++
T Consensus 186 ~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~ 219 (425)
T 1vp4_A 186 KQVKFIYVVSNFHNPAGVT-TSLEKRKALVEIAEK 219 (425)
T ss_dssp GGEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 2677875544 55556765 578999999999974
No 145
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=95.23 E-value=0.07 Score=42.53 Aligned_cols=103 Identities=10% Similarity=-0.021 Sum_probs=59.7
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|++|++.++++++.+. + ...|+....+||+....+... |..
T Consensus 105 ~g~~~a~~~~~~~~~~~~------------------------~---gd~Vl~~~p~~~~~~~~~~~~-g~~--------- 147 (412)
T 1yaa_A 105 LSGTGALHISAKFFSKFF------------------------P---DKLVYLSKPTWANHMAIFENQ-GLK--------- 147 (412)
T ss_dssp EHHHHHHHHHHHHHHHHC------------------------T---TCCEEEEESCCTTHHHHHHTT-TCC---------
T ss_pred cchHhHHHHHHHHHHHhC------------------------C---CCEEEEeCCCCccHHHHHHHc-Cce---------
Confidence 578999999988876651 1 357999999999976543322 211
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|..+ ...+ . .+ +++|++.+... ......+++...+...|. ..+.+.+++|.++|++
T Consensus 148 --~~~v~~~~-~~~~--~---~d------~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~ 207 (412)
T 1yaa_A 148 --TATYPYWA-NETK--S---LD------LNGFLNAIQKA---PEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIAS 207 (412)
T ss_dssp --EEEEECEE-TTTT--E---EC------HHHHHHHHHHS---CTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred --EEEEeeec-CCCC--c---cC------HHHHHHHHHhC---CCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 11122200 0000 0 12 56677777642 112334443445555675 5678999999999974
No 146
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=95.19 E-value=0.01 Score=47.41 Aligned_cols=99 Identities=17% Similarity=0.098 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
+++|++|++.+++... . + ..+||....+||+....+. ..|..
T Consensus 110 ~~g~~~al~~~~~~l~--------~------------------~---gd~vl~~~p~y~~~~~~~~-~~g~~-------- 151 (416)
T 1bw0_A 110 CSGGSHGILMAITAIC--------D------------------A---GDYALVPQPGFPHYETVCK-AYGIG-------- 151 (416)
T ss_dssp ESHHHHHHHHHHHHHC--------C------------------T---TCEEEEEESCCTHHHHHHH-HTTCE--------
T ss_pred eCChHHHHHHHHHHhC--------C------------------C---CCEEEEcCCCcHhHHHHHH-HcCcE--------
Confidence 3678899999988651 1 1 3589999999999765432 22211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... ..+. .+ +++|++.+.. ...+.+|..| +...|.+ .|++++++|.++|++
T Consensus 152 ---~~~v~~~~~-~~~~-----~d------~~~l~~~l~~-----~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~ 208 (416)
T 1bw0_A 152 ---MHFYNCRPE-NDWE-----AD------LDEIRRLKDD-----KTKLLIVTNP-SNPCGSN-FSRKHVEDIVRLAEE 208 (416)
T ss_dssp ---EEEEEEEGG-GTTE-----EC------HHHHHHHCCT-----TEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHH
T ss_pred ---EEEeecCcc-cCCC-----CC------HHHHHHHhcc-----CCeEEEEeCC-CCCCCcc-cCHHHHHHHHHHHHH
Confidence 011221000 0000 12 5566666532 2344556666 5556765 678999999999974
No 147
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=95.18 E-value=0.023 Score=45.77 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=25.0
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++.+|++|.++...|.+.+ +++|.++|++
T Consensus 137 ~~t~lv~~~~~~nptG~~~~----l~~i~~la~~ 166 (393)
T 1n8p_A 137 ENTKLVWIETPTNPTLKVTD----IQKVADLIKK 166 (393)
T ss_dssp SSEEEEEECSSCTTTCCCCC----HHHHHHHHHH
T ss_pred cCceEEEEECCCCCcceecC----HHHHHHHHHH
Confidence 36889999999999998774 8889998874
No 148
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=95.07 E-value=0.033 Score=45.72 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|++|..+.-.|.+.+ +++|.++|++
T Consensus 157 ~~~l~~ai~------~~t~~v~~e~p~NptG~~~d----l~~i~~la~~ 195 (430)
T 3ri6_A 157 SLAVEHACD------ETTKLLFLETISNPQLQVAD----LEALSKVVHA 195 (430)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHHT
T ss_pred HHHHHHhhC------CCCeEEEEECCCCCCCeecC----HHHHHHHHHH
Confidence 456666553 36899999998888887664 7788888875
No 149
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=95.05 E-value=0.012 Score=46.87 Aligned_cols=30 Identities=10% Similarity=0.145 Sum_probs=24.3
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.+|++++++...|.+.+ +++|.++|++
T Consensus 164 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~ 193 (406)
T 3cai_A 164 KSTRLVAVNSASGTLGGVTD----LRAMTKLVHD 193 (406)
T ss_dssp TTEEEEEEESBCTTTCBBCC----CHHHHHHHHH
T ss_pred CCceEEEEeCCcCCccccCC----HHHHHHHHHH
Confidence 36889999999998898765 6788888864
No 150
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=95.04 E-value=0.0085 Score=48.18 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|++++.+...|.+.+ +++|.++|++
T Consensus 165 ~~~l~~~i~------~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~ 203 (432)
T 3a9z_A 165 VEDILAAVR------PTTCLVTIMLANNETGVIMP----ISEISRRIKA 203 (432)
T ss_dssp HHHHHHTCC------TTEEEEECCSBCTTTCBBCC----HHHHHHHHHH
T ss_pred HHHHHHhcc------CCceEEEEECcccCcccccC----HHHHHHHHHh
Confidence 455555542 36889999999988898776 4677787763
No 151
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=94.99 E-value=0.014 Score=45.93 Aligned_cols=30 Identities=13% Similarity=0.032 Sum_probs=20.9
Q ss_pred EEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 129 AGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 129 AAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++++...+...|.+ .|.+.+++|.++|++
T Consensus 156 ~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~ 185 (376)
T 3ezs_A 156 DLVILNSPNNPTGRT-LSLEELISWVKLALK 185 (376)
T ss_dssp SEEEECSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCCcCCC-CCHHHHHHHHHHHHH
Confidence 455554346667765 477889999999974
No 152
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=94.98 E-value=0.026 Score=44.31 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=21.9
Q ss_pred CeEEEE-EcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIV-VEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI-~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++ .+| +...|.+ .|.+++++|.++|++
T Consensus 146 ~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~ 177 (364)
T 1lc5_A 146 DLDCLFLCTP-NNPTGLL-PERPLLQAIADRCKS 177 (364)
T ss_dssp TCCEEEEESS-CTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhhh
Confidence 344444 567 5556765 578999999999974
No 153
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=94.88 E-value=0.023 Score=46.36 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEE-cccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVV-EPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~-EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... +...+++ .|..+. ..++++|+++|++
T Consensus 174 ~~~l~~~i~~~-----~~~~i~~~~~~~~~-------~~~l~~i~~l~~~ 211 (447)
T 3h7f_A 174 MDAVRATALEF-----RPKVIIAGWSAYPR-------VLDFAAFRSIADE 211 (447)
T ss_dssp HHHHHHHHHHH-----CCSEEEEECSSCCS-------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-----CCeEEEEcCCCCCC-------ccCHHHHHHHHHH
Confidence 56677777543 2235555 455433 2388999999974
No 154
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=94.77 E-value=0.019 Score=46.42 Aligned_cols=39 Identities=15% Similarity=0.080 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. +++.+|++|..+...|.+.+ +++|.++|++
T Consensus 141 ~~~l~~~i~------~~t~~v~~~~p~nptG~~~~----l~~i~~la~~ 179 (403)
T 3cog_A 141 IKLLEAAIT------PETKLVWIETPTNPTQKVID----IEGCAHIVHK 179 (403)
T ss_dssp HHHHHHHCC------TTEEEEEEESSCTTTCCCCC----HHHHHHHHTS
T ss_pred HHHHHHhcC------cCCeEEEEECCCCCCCeeeC----HHHHHHHHHH
Confidence 455655543 36889999999888888764 8999999975
No 155
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=94.76 E-value=0.027 Score=44.91 Aligned_cols=95 Identities=7% Similarity=-0.007 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.+++..+ . . + ..+||....+||+....... .|..
T Consensus 53 ~~ggt~al~~~~~~l~-~------~------------------~---gd~Vl~~~~~~~~~~~~~~~-~g~~-------- 95 (394)
T 1o69_A 53 LNSATAALHLALRVAG-V------K------------------Q---DDIVLASSFTFIASVAPICY-LKAK-------- 95 (394)
T ss_dssp ESCHHHHHHHHHHHTT-C------C------------------T---TCEEEEESSSCGGGTHHHHH-TTCE--------
T ss_pred eCCHHHHHHHHHHHcC-C------C------------------C---CCEEEECCCccHHHHHHHHH-cCCE--------
Confidence 4789999999998752 0 1 2 45799999999988654433 2211
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|... .+. .+ +++|++.+... ++++.+|++++..| ....+++|.++|++
T Consensus 96 ---~~~v~~~~---~~~-----~d------~~~l~~~i~~~---~~~~~~v~~~~~~G-------~~~~l~~i~~l~~~ 147 (394)
T 1o69_A 96 ---PVFIDCDE---TYN-----ID------VDLLKLAIKEC---EKKPKALILTHLYG-------NAAKMDEIVEICKE 147 (394)
T ss_dssp ---EEEECBCT---TSS-----BC------HHHHHHHHHHC---SSCCCEEEEECGGG-------CCCCHHHHHHHHHH
T ss_pred ---EEEEEeCC---CCC-----cC------HHHHHHHHhcc---cCCceEEEEECCCC-------ChhhHHHHHHHHHH
Confidence 11122210 000 12 56677777642 22578899998655 23568888888864
No 156
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=94.62 E-value=0.015 Score=46.15 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=24.7
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|+++..+...|.+. |.+.+++|.++|++
T Consensus 161 ~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~ 192 (391)
T 3h14_A 161 DLAGLMVASPANPTGTML-DHAAMGALIEAAQA 192 (391)
T ss_dssp CCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCCCccC-CHHHHHHHHHHHHH
Confidence 456777777787788754 67789999999974
No 157
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=94.52 E-value=0.079 Score=42.14 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=24.2
Q ss_pred CeEE-EEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAG-IVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAA-vI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+ |+++..++.+|. ....+++|.++|++
T Consensus 140 ~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~ 170 (374)
T 2aeu_A 140 KDTLVIITGSTMDLKVI---ELENFKKVINTAKN 170 (374)
T ss_dssp TTEEEEEECBCTTSCBC---CHHHHHHHHHHHHH
T ss_pred CccEEEEEccCCCCCCC---CcccHHHHHHHHHH
Confidence 5778 999988877775 56789999999974
No 158
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=94.52 E-value=0.26 Score=40.68 Aligned_cols=45 Identities=20% Similarity=0.116 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.|.+....+..+.+|++.-.....|.+.+ +++|.++|++
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~ 273 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEK 273 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHH
Confidence 45666666543212235788888766666677643 7889999874
No 159
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=94.48 E-value=0.039 Score=42.53 Aligned_cols=40 Identities=8% Similarity=0.050 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ++.+|+++..+...|.+.+ +++|.++|++
T Consensus 113 ~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~----~~~i~~l~~~ 152 (353)
T 2yrr_A 113 PEAVARALKRR-----RYRMVALVHGETSTGVLNP----AEAIGALAKE 152 (353)
T ss_dssp HHHHHHHHHHS-----CCSEEEEESEETTTTEECC----HHHHHHHHHH
T ss_pred HHHHHHHHHhC-----CCCEEEEEccCCCcceecC----HHHHHHHHHH
Confidence 56677777641 5678899999988888765 6788888874
No 160
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=94.36 E-value=0.066 Score=44.28 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. +++.+|++|..+...|.+.+ +++|.++|++
T Consensus 207 ~~~l~~~i~------~~tk~v~l~~p~NptG~v~~----l~~i~~la~~ 245 (464)
T 1ibj_A 207 LDEVAAAIG------PQTKLVWLESPTNPRQQISD----IRKISEMAHA 245 (464)
T ss_dssp HHHHHHHCC------SSEEEEEECSSCTTTCCCCC----HHHHHHHHHT
T ss_pred HHHHHHHhc------cCceEEEEeCCCCCCCEeec----HHHHHHHHHH
Confidence 456666553 46899999999988888763 8999999975
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=94.29 E-value=0.071 Score=42.49 Aligned_cols=46 Identities=11% Similarity=0.115 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+++|++.+..... ....+++|++ |.+.-.|.+. |.+.+++|.++|+
T Consensus 163 ~~~l~~~l~~~~~-~~~~~~vi~~~p~~NPtG~~~-~~~~l~~l~~~~~ 209 (413)
T 3t18_A 163 IDVYKEAIDEGIR-DSDRIASLINSPGNNPTGYSL-SDEEWDEVITFLK 209 (413)
T ss_dssp HHHHHHHHHHHHH-HCSEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-cCCCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHHH
Confidence 4556666654210 1245577777 5477788754 6677999999997
No 162
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=94.18 E-value=0.06 Score=41.86 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=25.1
Q ss_pred HHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 112 AEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 112 ~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++++.+. . ..+++++..+...|.+ .|.+.+++|.++|++
T Consensus 136 ~~l~~~l~-----~--~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~ 175 (361)
T 3ftb_A 136 EDIISKID-----D--VDSVIIGNPNNPNGGL-INKEKFIHVLKLAEE 175 (361)
T ss_dssp HHHHHHTT-----T--CSEEEEETTBTTTTBC-CCHHHHHHHHHHHHH
T ss_pred HHHHHhcc-----C--CCEEEEeCCCCCCCCC-CCHHHHHHHHHHhhh
Confidence 45555543 2 3344444336666764 577889999999974
No 163
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=94.17 E-value=0.076 Score=41.66 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCCC
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPA 81 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~~ 81 (159)
++|+||++.+++... . +| +.+|+....+||+....+..... .
T Consensus 82 ~G~~~ai~~~~~~~~--------~------------------~g--~d~Vl~~~p~~~~~~~~~~~~g~-~--------- 123 (356)
T 1fg7_A 82 RGADEGIELLIRAFC--------E------------------PG--KDAILYCPPTYGMYSVSAETIGV-E--------- 123 (356)
T ss_dssp SHHHHHHHHHHHHHC--------C------------------TT--TCEEEECSSSCTHHHHHHHHHTC-E---------
T ss_pred CCHHHHHHHHHHHHh--------C------------------CC--CCEEEEeCCChHHHHHHHHHcCC-E---------
Confidence 567899998887541 1 23 47899999999998765443221 1
Q ss_pred CCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 82 FDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 82 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+..+|... .+. .| ++++++.+. ++.+|++...+...|.+ .|.+.+++|.++|+
T Consensus 124 --~~~v~~~~---~~~-----~d------~~~l~~~i~-------~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~ 176 (356)
T 1fg7_A 124 --CRTVPTLD---NWQ-----LD------LQGISDKLD-------GVKVVYVCSPNNPTGQL-INPQDFRTLLELTR 176 (356)
T ss_dssp --EEECCCCT---TSC-----CC------HHHHHTSCT-------TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHT
T ss_pred --EEEeeCCC---CCC-----CC------HHHHHHHhc-------CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCC
Confidence 01122110 000 12 344444331 46677777777777865 57899999999885
No 164
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=94.13 E-value=0.097 Score=41.77 Aligned_cols=46 Identities=7% Similarity=0.078 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEc-ccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVE-PIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~E-PiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++.|++.+..... ....+++|++ |.+.-.|.+ .|.+.+++|.++|+
T Consensus 164 ~~~l~~~l~~~~~-~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~ 210 (418)
T 3rq1_A 164 HEAFQNRVNELAA-KQTNVVVIFNTPGNNPTGYS-IEDKDWDSILNFLK 210 (418)
T ss_dssp HHHHHHHHHHHHH-HCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-cCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHH
Confidence 4566666654210 1244577777 547777865 46677999999996
No 165
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=94.07 E-value=0.047 Score=43.96 Aligned_cols=48 Identities=8% Similarity=0.198 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhc------cCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYN------KKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~------~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+..+. ....++.+|++.| .+.-.|.+ .|.+.+++|.++|++
T Consensus 168 ~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 168 PDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNS-LTSERKKEIYELARK 222 (425)
T ss_dssp HHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHH
Confidence 566777775320 0013567888887 55566765 678999999999974
No 166
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=93.80 E-value=0.47 Score=38.50 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+... +.....+++...+...|++ ++.+.+++|.++|++
T Consensus 189 ~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~ 233 (448)
T 3meb_A 189 FSNTKKDIQSA---PEKSIFLFHACAHNPSGID-FTEAQWKELLPIMKE 233 (448)
T ss_dssp HHHHHHHHHHS---CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHH
Confidence 56677777653 2334455544446666764 678889999999974
No 167
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=93.77 E-value=0.0095 Score=47.03 Aligned_cols=37 Identities=8% Similarity=0.045 Sum_probs=27.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC 65 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga 65 (159)
++|||+|++.|++.++. + + ...||....+|++.....
T Consensus 56 ~~sGt~al~~al~~~~~-------~------------------~---gd~Vi~~~~~~~~~~~~~ 92 (367)
T 3nyt_A 56 CANGTDALQIVQMALGV-------G------------------P---GDEVITPGFTYVATAETV 92 (367)
T ss_dssp ESCHHHHHHHHHHHTTC-------C------------------T---TCEEEEESSSCTHHHHHH
T ss_pred eCCHHHHHHHHHHHhCC-------C------------------C---cCEEEECCCccHHHHHHH
Confidence 47999999999987631 1 2 457999998888865544
No 168
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=93.61 E-value=0.036 Score=44.21 Aligned_cols=93 Identities=13% Similarity=0.072 Sum_probs=53.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.+++.++ . . + ...||....+||+.. .++...|..
T Consensus 84 ~~~Gt~a~~~~l~~~~-~------~------------------~---gd~vl~~~~~~~~~~-~~~~~~g~~-------- 126 (399)
T 2oga_A 84 VNSGMDALQLALRGLG-I------G------------------P---GDEVIVPSHTYIASW-LAVSATGAT-------- 126 (399)
T ss_dssp ESCHHHHHHHHHHHTT-C------C------------------T---TCEEEEESSSCTHHH-HHHHHTTCE--------
T ss_pred ecCHHHHHHHHHHHhC-C------C------------------C---cCEEEECCCccHHHH-HHHHHCCCE--------
Confidence 3689999999998662 1 1 1 457999999999843 444433321
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+. .+ +++|++.+. .++.+|++++.. |.+.+ +++|.++|++
T Consensus 127 ---~~~~~~~~~--~~~-----~d------~~~l~~~i~------~~~~~v~~~n~t---G~~~~----l~~i~~l~~~ 176 (399)
T 2oga_A 127 ---PVPVEPHED--HPT-----LD------PLLVEKAIT------PRTRALLPVHLY---GHPAD----MDALRELADR 176 (399)
T ss_dssp ---EEEECBCSS--SSS-----BC------HHHHHHHCC------TTEEEECCBCGG---GCCCC----HHHHHHHHHH
T ss_pred ---EEEEecCCC--CCC-----cC------HHHHHHhcC------CCCeEEEEeCCc---CCccC----HHHHHHHHHH
Confidence 111222100 000 12 456665553 257788876554 44432 7889998874
No 169
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=93.40 E-value=0.16 Score=40.51 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEccc-ccCCCCccCCHHHHHHHHHHh-cC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPI-QSEGGDNHGSNYFFQQLQKIG-KK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPi-qG~gGv~~pp~~fl~~lr~lc-~~ 159 (159)
+++|++.+.. ..++.+|+++|. +.-.|.+ .|.+.+++|.++| ++
T Consensus 160 ~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~ 205 (423)
T 3ez1_A 160 VDAVERLAGT----DPSVKGILFVPTYSNPGGET-ISLEKARRLAGLQAAA 205 (423)
T ss_dssp HHHHHHHHHS----CTTEEEEEECSSSCTTTCCC-CCHHHHHHHHTCCCSS
T ss_pred HHHHHHHHhh----CCCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHhc
Confidence 5677777752 247889989984 4456765 5677799999998 64
No 170
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=92.92 E-value=0.12 Score=40.20 Aligned_cols=41 Identities=7% Similarity=-0.083 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
++++++.+. .++.+|+++..+...|.+. |.+.+++|.++|+
T Consensus 143 ~~~l~~~l~------~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~ 183 (365)
T 3get_A 143 FKKLYETHK------DEIKLIFLCLPNNPLGECL-DASEATEFIKGVN 183 (365)
T ss_dssp HHHHHHHTT------TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTSC
T ss_pred HHHHHHHhC------CCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhCC
Confidence 566666653 3678888876666677654 6778888888874
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=92.65 E-value=0.082 Score=41.89 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEE-cccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVV-EPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~-EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ++++||+ +|..+ .. .+ +++|+++|++
T Consensus 158 ~~~l~~~i~~~-----~~~~v~~~~~~~~---~~-~~---l~~l~~l~~~ 195 (420)
T 3gbx_A 158 YDEMAKLAKEH-----KPKMIIGGFSAYS---GV-VD---WAKMREIADS 195 (420)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCTTCC---SC-CC---HHHHHHHHHH
T ss_pred HHHHHHHHHhc-----CCeEEEEecCccC---Cc-cC---HHHHHHHHHH
Confidence 56777777653 4677788 55543 22 23 8899999974
No 172
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=92.46 E-value=0.05 Score=43.81 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.++.. ..++.+|++...+...|++ .|.+.+++|.++|++
T Consensus 193 ~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~ 237 (444)
T 3if2_A 193 FEALENLPALK---EGRIGAICCSRPTNPTGNV-LTDEEMAHLAEIAKR 237 (444)
T ss_dssp HHHHHTCHHHH---TTCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc---CCCceEEEeCCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 55666654432 2467777776556777875 567789999999974
No 173
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=92.24 E-value=0.16 Score=40.89 Aligned_cols=30 Identities=7% Similarity=-0.079 Sum_probs=24.8
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++.+|++|..+...|.+.+ +++|.++|++
T Consensus 146 ~~t~~v~l~~p~NptG~v~~----l~~i~~la~~ 175 (404)
T 1e5e_A 146 PNTKIVYFETPANPTLKIID----MERVCKDAHS 175 (404)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHT
T ss_pred CCCcEEEEECCCCCCCcccC----HHHHHHHHHh
Confidence 36889999998888888764 8999999975
No 174
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=91.35 E-value=0.13 Score=40.60 Aligned_cols=44 Identities=11% Similarity=-0.032 Sum_probs=29.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL 66 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~ 66 (159)
++|||+|++.|++.++.+. .. +. + ++.+||....+||+......
T Consensus 55 ~~sGt~a~~~al~~~~~~~-~~--~~------------------~-~g~~Vi~~~~~~~~~~~~~~ 98 (390)
T 3b8x_A 55 VSSGSTANLLMIAALFFTK-KP--RL------------------K-KGDEIIVPAVSWSTTYYPLQ 98 (390)
T ss_dssp ESCHHHHHHHHHHHTTSSS-SC--SC------------------C-TTCEEEEESSSCHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHhhh-hc--CC------------------C-CcCEEEECCCCcHHHHHHHH
Confidence 3689999999998764210 00 10 1 14689999999998876443
No 175
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=91.19 E-value=0.092 Score=41.34 Aligned_cols=93 Identities=9% Similarity=0.077 Sum_probs=54.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhhcCCCccccccCCC
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIP 80 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s~s~~~~~~~~~~~ 80 (159)
++||++|++.+++..+ . . + ...|+....+|++.. .++...|..
T Consensus 60 ~~~gt~al~~~~~~~~-~------~------------------~---gd~Vl~~~~~~~~~~-~~~~~~g~~-------- 102 (393)
T 1mdo_A 60 VSSATAGMHIALMALG-I------G------------------E---GDEVITPSMTWVSTL-NMIVLLGAN-------- 102 (393)
T ss_dssp ESCHHHHHHHHHHHTT-C------C------------------T---TCEEEEESSSCHHHH-HHHHHTTCE--------
T ss_pred ecChHHHHHHHHHHcC-C------C------------------C---CCEEEeCCCccHhHH-HHHHHCCCE--------
Confidence 3689999999998652 1 1 2 457999999998864 333333321
Q ss_pred CCCCCcccCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 81 AFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 81 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|.... .+ . .+ +++|++.+. .++.+|++.+..|. +. + +++|.++|++
T Consensus 103 ---~~~v~~~~~--~~--~---~d------~~~l~~~l~------~~~~~v~~~~~~G~---~~-~---~~~i~~l~~~ 152 (393)
T 1mdo_A 103 ---PVMVDVDRD--TL--M---VT------PEHIEAAIT------PQTKAIIPVHYAGA---PA-D---LDAIYALGER 152 (393)
T ss_dssp ---EEEECBCTT--TC--C---BC------HHHHHHHCC------TTEEEECCBCGGGC---CC-C---HHHHHHHHHH
T ss_pred ---EEEEeccCC--cC--C---CC------HHHHHHhcC------CCceEEEEeCCCCC---cC-C---HHHHHHHHHH
Confidence 111222100 00 0 12 456666553 26788998886543 32 2 7888888864
No 176
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=90.78 E-value=0.55 Score=37.24 Aligned_cols=45 Identities=16% Similarity=0.088 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ......+++..-+.-.|. ..+.+.+++|.++|++
T Consensus 170 ~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~-~~~~~~l~~i~~~~~~ 214 (409)
T 4eu1_A 170 LAGMLECLDKA---PEGSVILVHACAHNPTGV-DPTHDDWRQVCDVIKR 214 (409)
T ss_dssp HHHHHHHHHHS---CTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHh
Confidence 56777777653 234455554333555565 4577889999999974
No 177
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=90.65 E-value=1.1 Score=36.85 Aligned_cols=19 Identities=16% Similarity=-0.393 Sum_probs=16.6
Q ss_pred CCcchHHHHHHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNIFIWYQ 20 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~ 20 (159)
++||+||..||..||....
T Consensus 152 ~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 152 STVSESTLIALLAARKNKI 170 (481)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHH
Confidence 5799999999999998754
No 178
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=90.58 E-value=0.046 Score=42.26 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=25.5
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccc
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRT 62 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T 62 (159)
+++|++|++.+++... . + ..+||....+||+..
T Consensus 57 ~~g~t~a~~~~~~~~~--------~------------------~---gd~vl~~~~~~~~~~ 89 (352)
T 1iug_A 57 TGSGTLAMEALVKNLF--------A------------------P---GERVLVPVYGKFSER 89 (352)
T ss_dssp ESCHHHHHHHHHHHHC--------C------------------T---TCEEEEEECSHHHHH
T ss_pred cCchHHHHHHHHHhcc--------C------------------C---CCeEEEEeCCchhHH
Confidence 3689999999998651 1 2 357999999999975
No 179
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=90.28 E-value=0.061 Score=42.00 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=28.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC 65 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga 65 (159)
++||++|++.|++.++.+ . . + ..+||....+||+.....
T Consensus 53 ~~ggt~al~~~~~~~~~~--~---~------------------~---gd~Vl~~~~~~~~~~~~~ 91 (375)
T 2fnu_A 53 FNSATSALLTLYRNFSEF--S---A------------------D---RNEIITTPISFVATANML 91 (375)
T ss_dssp ESCHHHHHHHHHHHSSCC--C---T------------------T---SCEEEECSSSCTHHHHHH
T ss_pred eCCHHHHHHHHHHHhccc--C---C------------------C---CCEEEECCCccHhHHHHH
Confidence 478999999999876321 0 0 2 458999999999876543
No 180
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=90.05 E-value=0.81 Score=36.01 Aligned_cols=45 Identities=13% Similarity=0.103 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+++.++.. ..+...+++...+.-.|.+ .+.+.+++|.++|++
T Consensus 162 ~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~ 206 (401)
T 7aat_A 162 FTGAMEDISKI---PEKSIILLHACAHNPTGVD-PRQEQWKELASVVKK 206 (401)
T ss_dssp HHHHHHHHTTS---CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHh
Confidence 34455555442 2456777887777777764 678899999999864
No 181
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=89.53 E-value=2.2 Score=35.30 Aligned_cols=45 Identities=20% Similarity=0.116 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++|++.|.+....+..+.+|++.-.....|.+.+ +++|.++|++
T Consensus 232 ~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~ 276 (511)
T 3vp6_A 232 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEK 276 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc----HHHHHHHHHH
Confidence 56677777653212234678888777767777643 7888888874
No 182
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=88.66 E-value=0.055 Score=42.81 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=28.8
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS 67 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s 67 (159)
++|||+|++.|++.++. . + +.+||....+||+.......
T Consensus 77 ~~~gt~al~~~l~~~~~-------~------------------~---gd~vl~~~~~~~~~~~~~~~ 115 (391)
T 3dr4_A 77 CNNGTTALHLALVAMGI-------G------------------P---GDEVIVPSLTYIASANSVTY 115 (391)
T ss_dssp ESSHHHHHHHHHHHHTC-------C------------------T---TCEEEEESSSCTHHHHHHHH
T ss_pred eCCHHHHHHHHHHHcCC-------C------------------C---cCEEEECCCchHHHHHHHHH
Confidence 37899999999987621 1 1 46899999999998655443
No 183
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=87.84 E-value=0.2 Score=39.47 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=26.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC 65 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga 65 (159)
+||++|++.|++..+. . + ..+||....+||+.....
T Consensus 60 ~sGt~al~~~l~~l~~-------~------------------~---gd~Vi~~~~~~~~~~~~~ 95 (388)
T 1b9h_A 60 TNGTHALELALQVMGV-------G------------------P---GTEVIVPAFTFISSSQAA 95 (388)
T ss_dssp SCHHHHHHHHHHHTTC-------C------------------T---TCEEEEESSSCTHHHHHH
T ss_pred CCHHHHHHHHHHHcCC-------C------------------C---cCEEEECCCccHHHHHHH
Confidence 6899999999986520 1 2 357999999999886543
No 184
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=87.57 E-value=0.57 Score=36.78 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+... ++.+||+.| .. |. ...+++|.++|++
T Consensus 152 ~~~l~~~i~~~-----~~~~v~~~~~~~---~~----~~~l~~i~~l~~~ 189 (405)
T 2vi8_A 152 YDDVREKARLH-----RPKLIVAAAAAY---PR----IIDFAKFREIADE 189 (405)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCSSC---CS----CCCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-----CCeEEEEeCCCC---Cc----cCCHHHHHHHHHH
Confidence 56677777642 346777754 32 22 2238999999974
No 185
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=86.61 E-value=0.11 Score=40.63 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=27.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC 65 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga 65 (159)
++||++|++.|++.++. . + ..+|+....+||+.....
T Consensus 59 ~~~gt~a~~~~~~~~~~-------~------------------~---gd~v~~~~~~~~~~~~~~ 95 (374)
T 3uwc_A 59 VGTGTDALAMSFKMLNI-------G------------------A---GDEVITCANTFIASVGAI 95 (374)
T ss_dssp ESCHHHHHHHHHHHTTC-------C------------------T---TCEEEEESSSCHHHHHHH
T ss_pred eCCHHHHHHHHHHHcCC-------C------------------C---CCEEEECCCccHHHHHHH
Confidence 36899999999986521 1 2 468999999999876443
No 186
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=86.06 E-value=1.9 Score=35.59 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.+......+.++.+|++.-.+.-.|.+ .+.+-+++|.++|++
T Consensus 221 ~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~-~s~~~l~~i~~la~~ 268 (500)
T 3tcm_A 221 TSDVKKQLEDARSRGINVRALVVINPGNPTGQV-LAEENQYDIVKFCKN 268 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCCccc-CCHHHHHHHHHHHHH
Confidence 556666665432112356666666445556754 567889999999874
No 187
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=84.96 E-value=1.8 Score=34.39 Aligned_cols=43 Identities=21% Similarity=0.346 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc-cccCCCCccCCHHHHHHHHHHh-cC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP-IQSEGGDNHGSNYFFQQLQKIG-KK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP-iqG~gGv~~pp~~fl~~lr~lc-~~ 159 (159)
+++|++.+. ..++.+|++.| .+.-.|.+. |.+.+++|.++| ++
T Consensus 169 ~~~l~~~l~-----~~~~~~v~~~p~~~NPtG~~~-~~~~~~~l~~~a~~~ 213 (427)
T 3ppl_A 169 MDAVEELVK-----NPQVKGMWVVPVFSNPTGFTV-TEDVAKRLSAMETAA 213 (427)
T ss_dssp HHHHHHHTT-----STTEEEEEECCSSCTTTCCCC-CHHHHHHHHHCCCSS
T ss_pred HHHHHHHHh-----cCCCeEEEECCCCCCCCCccC-CHHHHHHHHHHHhhc
Confidence 566666663 24788899898 455577654 667799999998 64
No 188
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=84.28 E-value=3.2 Score=33.52 Aligned_cols=39 Identities=8% Similarity=0.005 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc----cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP----IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP----iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+. ++..+|++|. .....|.+ .-+++|.++|++
T Consensus 149 ~e~l~~ai~------~~tklV~i~~s~g~p~nptg~v----~~l~~I~~la~~ 191 (409)
T 3jzl_A 149 FPRIAKKMT------PKTKMIGIQRSRGYADRPSFTI----EKIKEMIVFVKN 191 (409)
T ss_dssp HHHHHHHCC------TTEEEEEEECSCTTSSSCCCCH----HHHHHHHHHHHH
T ss_pred HHHHHHhcc------CCCeEEEEECCCCCCCCCcCcc----ccHHHHHHHHHh
Confidence 456665553 3678899998 44444433 457888888863
No 189
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=83.72 E-value=0.24 Score=39.52 Aligned_cols=36 Identities=14% Similarity=0.071 Sum_probs=26.6
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhh
Q psy4805 2 MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGC 65 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga 65 (159)
+||++|++.|++..+. . + ...||....+||+.....
T Consensus 64 ~~gt~al~~~~~~~~~-------~------------------~---gd~Vl~~~~~~~~~~~~~ 99 (418)
T 2c81_A 64 TSGSTALMLALEALGI-------G------------------E---GDEVIVPSLTWIATATAV 99 (418)
T ss_dssp SCHHHHHHHHHHHTTC-------C------------------T---TCEEEEESSSCTHHHHHH
T ss_pred CCHHHHHHHHHHHcCC-------C------------------C---cCEEEECCCccHhHHHHH
Confidence 6899999999986521 1 2 357999999999886544
No 190
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=83.66 E-value=0.31 Score=39.53 Aligned_cols=29 Identities=10% Similarity=0.007 Sum_probs=19.7
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+..+|++|......|.+.+ +++|.++|++
T Consensus 167 ~tklV~~e~~~NptG~v~d----l~~I~~la~~ 195 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHD----VPAIVAAVRS 195 (415)
T ss_dssp TEEEEEEESSCTTTCCCCC----HHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCEeec----HHHHHHHHHh
Confidence 4677778877776676653 5677777753
No 191
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=83.62 E-value=3.8 Score=33.53 Aligned_cols=19 Identities=16% Similarity=-0.312 Sum_probs=16.7
Q ss_pred CCcchHHHHHHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNIFIWYQ 20 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~~ 20 (159)
++||+||-.|+..||.+..
T Consensus 146 ~ggt~anl~al~~ar~~~~ 164 (475)
T 3k40_A 146 GTASESTLVALLGAKAKKL 164 (475)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHH
Confidence 6899999999999998753
No 192
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=81.95 E-value=0.84 Score=36.43 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=22.5
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+||++..+.-.|.+ ++.+.+++|.++|++
T Consensus 198 ~~~~v~l~~p~NPtG~~-~~~~~l~~l~~la~~ 229 (432)
T 3ei9_A 198 RTDIIFFCSPNNPTGAA-ATREQLTQLVEFAKK 229 (432)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 45566666556666764 567789999999863
No 193
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=81.50 E-value=0.69 Score=36.92 Aligned_cols=34 Identities=3% Similarity=-0.161 Sum_probs=26.3
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+++|++|++.+++... + ...||....+||+....
T Consensus 73 ~~ggt~al~~~l~~l~---------------------------~---gd~Vlv~~~~~~~~~~~ 106 (424)
T 2po3_A 73 TCNATAGLQLLAHAAG---------------------------L---TGEVIMPSMTFAATPHA 106 (424)
T ss_dssp ESCHHHHHHHHHHHHT---------------------------C---CSEEEEESSSCTHHHHH
T ss_pred eCCHHHHHHHHHHHcC---------------------------C---CCEEEECCCccHHHHHH
Confidence 4789999999998652 1 25799999999987653
No 194
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=81.28 E-value=3.7 Score=33.01 Aligned_cols=19 Identities=5% Similarity=-0.198 Sum_probs=15.7
Q ss_pred CCCcchHHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIWY 19 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~ 19 (159)
+++||||+..|++.++..+
T Consensus 109 t~ggtea~~~al~a~~~~~ 127 (452)
T 2dgk_A 109 TIGSSEACMLGGMAMKWRW 127 (452)
T ss_dssp ESSHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHH
Confidence 3689999999999887643
No 195
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=80.33 E-value=1.1 Score=35.27 Aligned_cols=41 Identities=20% Similarity=0.287 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEE-cccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVV-EPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~-EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+. .++.+|++ .| +.-.|.+ .|++.+++|.++|++
T Consensus 154 ~~~l~~~l~------~~~~~v~~~~p-~NPtG~~-~~~~~l~~i~~~~~~ 195 (385)
T 1b5p_A 154 PERVRRAIT------PRTKALVVNSP-NNPTGAV-YPKEVLEALARLAVE 195 (385)
T ss_dssp HHHHHTTCC------TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC------CCCEEEEEeCC-CCCCCCC-cCHHHHHHHHHHHHH
Confidence 455555442 24555555 55 3344543 478999999999863
No 196
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=76.21 E-value=12 Score=30.33 Aligned_cols=41 Identities=10% Similarity=0.000 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc----cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP----IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP----iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.+. .+..+|++|+ ..+-.| ...-+++|.++|++
T Consensus 164 ~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg----~v~dl~~i~~ia~~ 208 (427)
T 3hvy_A 164 INTVKEELKKD----DSIKLIHIQRSTGYGWRKSL----RIAEIAEIIKSIRE 208 (427)
T ss_dssp HHHHHHHHHHC----TTEEEEEEESSCCSSSSCCC----CHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCC----CCCEEEEEECCCCCCCCccc----cHHHHHHHHHHHHH
Confidence 56677777641 3678999999 333333 33457888888864
No 197
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=76.18 E-value=0.89 Score=37.02 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=19.5
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|++.+ +...|.+.+ +++|.++|++
T Consensus 146 ~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~ 173 (446)
T 2x3l_A 146 GHKLVVLTY-PNYYGETFN----VEEVIKSLHQ 173 (446)
T ss_dssp -CCEEEEES-SCTTSCCCC----HHHHHHHHHH
T ss_pred CceEEEEEC-CCCCeEecC----HHHHHHHHHh
Confidence 567777777 555777654 7888888864
No 198
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=75.03 E-value=15 Score=29.81 Aligned_cols=41 Identities=10% Similarity=0.040 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcc----cccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEP----IQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EP----iqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++++++.+.+ ..+...|++|+ ..+..|. ..=+++|.++|++
T Consensus 164 ~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~----i~dl~~i~~la~~ 208 (427)
T 3i16_A 164 LEEIEKVLKE----DESITLVHIQRSTGYGWRRALL----IEDIKSIVDCVKN 208 (427)
T ss_dssp HHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCC----HHHHHHHHHHHHH
T ss_pred HHHHHHHhhC----CCCCEEEEEEcCCCCCCCCccc----HHHHHHHHHHHHH
Confidence 5667777763 13678999998 4443343 3457888888863
No 199
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=73.43 E-value=15 Score=29.75 Aligned_cols=18 Identities=11% Similarity=-0.296 Sum_probs=15.4
Q ss_pred CCCcchHHHHHHHHHHHH
Q psy4805 1 MMCGSCSNENAYKNIFIW 18 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~ 18 (159)
+++||||+-.|+..+|..
T Consensus 145 t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 145 QGSASEATLVALLAARTK 162 (486)
T ss_dssp ESCHHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHH
Confidence 368999999999999865
No 200
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=72.47 E-value=0.87 Score=36.59 Aligned_cols=46 Identities=13% Similarity=0.073 Sum_probs=28.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCL 66 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~ 66 (159)
++|||+|++.|++..+.++..+. .. .+ ..+||....+||+......
T Consensus 83 ~~sGt~a~~~al~~l~~~~~~~~-~~----------------~~---gd~Vi~~~~~~~~~~~~~~ 128 (437)
T 3bb8_A 83 TTSGSSANLLALTALTSPKLGVR-AL----------------KP---GDEVITVAAGFPTTVNPTI 128 (437)
T ss_dssp ESCHHHHHHHHHHHTTCGGGGGG-SC----------------CT---TCEEEECSSSCHHHHHHHH
T ss_pred eCCHHHHHHHHHHHhhhcccccc-cC----------------CC---cCEEEECCCCcHHHHHHHH
Confidence 36899999999987642210000 00 02 4579999999988765443
No 201
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=69.96 E-value=4.4 Score=30.84 Aligned_cols=48 Identities=17% Similarity=0.113 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCC-CCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEG-GDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~g-Gv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+........++.+|++++.+... |. +.|.+.+++|.++|++
T Consensus 116 ~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~-~~~~~~l~~i~~~a~~ 164 (347)
T 1jg8_A 116 PDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR-VVPLENIKEICTIAKE 164 (347)
T ss_dssp HHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccccCceEEEEeccccccCCc-cCcHHHHHHHHHHHHH
Confidence 566666654210001268899999888765 75 5678899999999974
No 202
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=67.54 E-value=9.7 Score=31.60 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
+++|++.+. .++.+|+++..+.-.|.+ .|.+.+++|.++|+
T Consensus 234 ~~~l~~~l~------~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~la~ 274 (533)
T 3f6t_A 234 PNEIEKLKD------PSIKALIVVNPTNPTSKE-FDTNALNAIKQAVE 274 (533)
T ss_dssp HHHHHHHSC------TTEEEEEEESSCTTTCBC-CCHHHHHHHHHHHH
T ss_pred HHHHHHHhC------CCCeEEEEeCCCCCCccc-cCHHHHHHHHHHHH
Confidence 455665542 356777775445556754 57788999999997
No 203
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=65.21 E-value=9.1 Score=30.27 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEccccc-CCCCccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQS-EGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG-~gGv~~pp~~fl~~lr~lc~ 158 (159)
+++|++.+.. .++.+|++.|... -.|. +.|.+++++|.++|+
T Consensus 167 ~~~l~~~l~~-----~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~ 209 (422)
T 3d6k_A 167 MGVVRELVKD-----PQVKGMWTVPVFGNPTGV-TFSEQTCRELAEMST 209 (422)
T ss_dssp HHHHHHHHTS-----TTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCC
T ss_pred HHHHHHHHhc-----CCCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHh
Confidence 5667666642 3678888788544 4675 568999999999997
No 204
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=60.17 E-value=19 Score=29.47 Aligned_cols=18 Identities=11% Similarity=-0.285 Sum_probs=14.8
Q ss_pred CCcchHHHHHHHHHHHHH
Q psy4805 2 MCGSCSNENAYKNIFIWY 19 (159)
Q Consensus 2 ~sGseA~e~AlklA~~~~ 19 (159)
++||||+..|+..++..+
T Consensus 124 ~ggtea~~~a~~a~~~~~ 141 (502)
T 3hbx_A 124 VGSSEAIMLAGLAFKRKW 141 (502)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 689999999998776554
No 205
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=52.86 E-value=9.2 Score=29.92 Aligned_cols=32 Identities=3% Similarity=-0.029 Sum_probs=25.4
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+|+++..+...|.+ +|.+.+++|.++|++
T Consensus 163 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 163 HIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIE 194 (400)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 56788887767777875 578999999999964
No 206
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=52.69 E-value=30 Score=28.47 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.|++.|+++. .+.+++|++-|--...|++ +=+++|.++|++
T Consensus 184 ~~~le~aI~~~~--~~~~~~Vv~t~t~~g~g~~----ddl~~Ia~ia~~ 226 (450)
T 3bc8_A 184 LKAVEAKIQELG--PEHILCLHSTTACFAPRVP----DRLEELAVICAN 226 (450)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEEESSCCTTBCC----CCHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCCEEEEEEECCcCCCcee----cCHHHHHHHHHH
Confidence 678888888762 2578999997733322332 227788888864
No 207
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=51.99 E-value=9.3 Score=30.36 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=25.3
Q ss_pred CeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 127 PVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 127 ~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
++.+||++..+...|++ ++.+.+++|.++|++
T Consensus 209 ~~~~v~l~~p~NPtG~~-~~~~~l~~l~~l~~~ 240 (449)
T 3qgu_A 209 RTDIIFFCSPNNPTGAA-ATRAQLTELVNFARK 240 (449)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 56788888767777874 578899999999974
No 208
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=47.92 E-value=12 Score=29.21 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=25.4
Q ss_pred CCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 126 TPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 126 ~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
.++.++++...+.-.|++ .|.+.+++|.++|++
T Consensus 179 ~~~~~v~~~~p~NptG~~-~~~~~~~~l~~~a~~ 211 (417)
T 3g7q_A 179 EETGMICVSRPTNPTGNV-ITDEELMKLDRLANQ 211 (417)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred cCceEEEECCCCCCCCCc-cCHHHHHHHHHHHHH
Confidence 367788887667778875 466779999999974
No 209
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=45.81 E-value=70 Score=25.85 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+.+. +..+||+ -....+ .+.+ +++|+++|++
T Consensus 182 ~d~le~~i~~~-----~tklIi~-~~sn~~--~~~d---l~~i~~ia~~ 219 (483)
T 1rv3_A 182 YDRLEENARLF-----HPKLIIA-GTSCYS--RNLD---YGRLRKIADE 219 (483)
T ss_dssp HHHHHHHHHHH-----CCSEEEE-CCSSCC--SCCC---HHHHHHHHHH
T ss_pred HHHHHHHHhhc-----CCcEEEE-eCCcCC--CcCC---HHHHHHHHHH
Confidence 56777777642 3456777 433333 3334 7899999874
No 210
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=43.06 E-value=6.9 Score=30.23 Aligned_cols=36 Identities=17% Similarity=0.039 Sum_probs=26.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
++||++|++.|++.+.. . + ...||....+||+....
T Consensus 57 ~~sgt~al~~~l~~l~~-------~------------------~---gd~Vi~~~~~~~~~~~~ 92 (373)
T 3frk_A 57 CGNGLDALHLILKGYDI-------G------------------F---GDEVIVPSNTFIATALA 92 (373)
T ss_dssp ESCHHHHHHHHHHHTTC-------C------------------T---TCEEEEETTSCTHHHHH
T ss_pred eCCHHHHHHHHHHHcCC-------C------------------C---cCEEEECCCCcHHHHHH
Confidence 47899999999986521 1 2 45899999999986543
No 211
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=42.43 E-value=66 Score=25.66 Aligned_cols=43 Identities=9% Similarity=0.115 Sum_probs=22.8
Q ss_pred HHHHHHHH-HHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLI-TKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i-~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.| .... ..++.+|++.-.....|.+.+ +++|.++|++
T Consensus 216 ~~~l~~~i~~~~~--~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~ 259 (456)
T 2z67_A 216 VEDIENAIKKEIE--LGNRPCVLSTLTFFPPRNSDD----IVEIAKICEN 259 (456)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEEESSCCTTBCCCC----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhh--CCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHH
Confidence 56677777 3211 124555554433234566543 6777777763
No 212
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=39.36 E-value=11 Score=28.99 Aligned_cols=38 Identities=5% Similarity=-0.193 Sum_probs=27.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchhhhh
Q psy4805 1 MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLS 67 (159)
Q Consensus 1 ~~sGseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~ga~s 67 (159)
+++|++|++.+++... . + ...||....+||+.......
T Consensus 88 t~g~~~al~~~~~~l~--------~------------------~---gd~Vl~~~p~~~~~~~~~~~ 125 (360)
T 3hdo_A 88 ANGSDEVLNNLIRAFA--------A------------------E---GEEIGYVHPSYSYYGTLAEV 125 (360)
T ss_dssp ESSHHHHHHHHHHHHC--------C------------------T---TCEEEEESSSCTHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh--------C------------------C---CCEEEEcCCChHHHHHHHHH
Confidence 4789999999988541 1 2 35799999999987755443
No 213
>1rfm_A L-sulfolactate dehydrogenase; methanogens, coenzyme M, hyperthermostable, Pro-S hydrogen transfer; HET: NAD; 2.50A {Methanocaldococcus jannaschii} PDB: 2x06_A*
Probab=38.21 E-value=19 Score=28.55 Aligned_cols=32 Identities=25% Similarity=0.202 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++|+|=...+
T Consensus 90 ~~~am~~aiekAk~~------G-----------------------ig~v~vrns~H~G~~g 121 (344)
T 1rfm_A 90 GKKAMELAIKKAKNV------G-----------------------VGVVATRNANHFGIAG 121 (344)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCSCTH
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEecCCCcchhH
Confidence 457999999999988 3 4689999999966544
No 214
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=38.18 E-value=19 Score=28.48 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=25.6
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++|+|=...+
T Consensus 92 ~~~am~~aiekAk~~------G-----------------------ig~v~vrns~H~G~~g 123 (339)
T 4h8a_A 92 AKMGMEHAIKTAQQN------G-----------------------VAVVGISRMGHSGAIS 123 (339)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCCCTH
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEecCCCcchhH
Confidence 457999999999988 3 4689999999965544
No 215
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=36.86 E-value=21 Score=28.61 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.||+.||++ | .-+|+.++|+|=...+
T Consensus 97 ~~~am~~aiekAk~~------G-----------------------ig~v~vrns~H~G~~g 128 (365)
T 3i0p_A 97 GTIGMKMAIEKAKKY------G-----------------------MGMVVVRNSTHFGIAG 128 (365)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCSCHH
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEecCCCcchhH
Confidence 467999999999988 3 4689999999976544
No 216
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=36.78 E-value=21 Score=28.18 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=25.7
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++|+|=...+
T Consensus 90 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 121 (333)
T 1nxu_A 90 AKKMMDRAIELAADH------G-----------------------IGLVALRNANHWMRGG 121 (333)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCSCTH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCCCccH
Confidence 457899999999987 3 5799999999965544
No 217
>2x06_A L-sulfolactate dehydrogenase; oxidoreductase, hyperthermostable, coenzyme M, methanogens, coenzyme M biosynthesis; HET: NAD; 2.50A {Methanocaldococcus jannaschii}
Probab=36.58 E-value=31 Score=27.35 Aligned_cols=32 Identities=25% Similarity=0.202 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|++.|++.|+++ | .-+|+..+++|=..++
T Consensus 90 ~~~a~~~ai~~Ak~~------G-----------------------i~~v~v~ns~H~G~~g 121 (344)
T 2x06_A 90 GKKAMELAIKKAKNV------G-----------------------VGVVATRNANHFGIAG 121 (344)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEESCCCCSCTH
T ss_pred HHHHHHHHHHHHHhc------C-----------------------eEEEEeccCccccchH
Confidence 457899999999887 3 4689999999966544
No 218
>1vbi_A Type 2 malate/lactate dehydrogenase; malate dehydrogenase, NAD(P) binding protein, thermus thermo HB8, structural genomics; HET: NAD; 1.80A {Thermus thermophilus} PDB: 1x0a_A
Probab=36.35 E-value=22 Score=28.26 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||.+ | .-+|+.++|+|=...+
T Consensus 89 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 120 (344)
T 1vbi_A 89 ALKAVEAAQSLARRH------G-----------------------LGAVGVRRSTHFGMAG 120 (344)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCCCHH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCcchHH
Confidence 467899999999988 3 5789999999976644
No 219
>1xrh_A Ureidoglycolate dehydrogenase; structural genomics, protein structure initiative, NYSGXRC, ALLD, GLXB8, B0517, PSI; 2.25A {Escherichia coli} SCOP: c.122.1.1
Probab=36.12 E-value=22 Score=28.33 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||.+ | .-+|+.++|+|=...+
T Consensus 92 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 123 (351)
T 1xrh_A 92 AKMGMEHAIKTAQQN------G-----------------------VAVVGISRMGHSGAIS 123 (351)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCCCTH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCcchHH
Confidence 467899999999988 3 5789999999976544
No 220
>1bm4_A Protein (moloney murine leukemia virus capsid); moloney murine leukemia virus capsid protein, momlv, MU-MLV, MHR, major homology region; NMR {Synthetic} SCOP: j.47.1.1
Probab=36.00 E-value=14 Score=18.89 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=16.1
Q ss_pred cccccCCCCccCCHHHHHHHHHHhc
Q psy4805 134 EPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 134 EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
|-+||. -.+|..||++|.+..|
T Consensus 6 eV~Qg~---~EsPs~FlerL~eayR 27 (32)
T 1bm4_A 6 GITQGP---NESPSAFLERLKEAYR 27 (32)
T ss_dssp TTTTTG---GGHHHHHHHHHHHHHH
T ss_pred HHHhCC---CCChHHHHHHHHHHHH
Confidence 446664 4678899999988765
No 221
>3uoe_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.31A {Sinorhizobium meliloti}
Probab=35.22 E-value=23 Score=28.30 Aligned_cols=32 Identities=19% Similarity=0.059 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++|+|=...+
T Consensus 113 ~~~Am~~aiekAk~~------G-----------------------ig~v~vrnS~H~G~~g 144 (357)
T 3uoe_A 113 MMDAMRVTRRILKET------G-----------------------LAIAAIRNANHMGMLA 144 (357)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCCCTH
T ss_pred HHHHHHHHHHHHHHh------C-----------------------EEEEEEecCCCccchH
Confidence 467999999999988 3 4689999999966544
No 222
>1v9n_A Malate dehydrogenase; riken structural genomics/proteomics initiati structural genomics, oxidoreductase; HET: NDP; 2.10A {Pyrococcus horikoshii}
Probab=34.63 E-value=24 Score=28.22 Aligned_cols=32 Identities=25% Similarity=0.142 Sum_probs=25.6
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|++.|++.||++ | .-+|+.++|+|=...+
T Consensus 101 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 132 (360)
T 1v9n_A 101 GYRSMKLAIKKAKDT------G-----------------------IGIVIARNSNHYGIAG 132 (360)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCSCTH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCcchHH
Confidence 467899999999988 3 4689999999966544
No 223
>1z2i_A Malate dehydrogenase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: NAD; 2.20A {Agrobacterium tumefaciens}
Probab=34.36 E-value=24 Score=28.15 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=25.7
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||.+ | .-+|+.++|+|=...+
T Consensus 99 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 130 (358)
T 1z2i_A 99 TYAAMENAMALAEKF------G-----------------------IGAVAIRNSSHFGPAG 130 (358)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEECCCSCTH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCcchHH
Confidence 467899999999988 3 5789999999976544
No 224
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=32.45 E-value=24 Score=28.04 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=25.7
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||.+ | .-+|+.++|+|=...+
T Consensus 100 ~~~am~~aiekAk~~------G-----------------------i~~v~vrns~H~G~~g 131 (343)
T 1wtj_A 100 LAAARSLLIDKARSA------G-----------------------VAILAIRGSHHFAALW 131 (343)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEEECCSCSH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCCCchH
Confidence 457899999999988 3 5799999999965544
No 225
>2oyy_A Hexameric cytochrome; all helical, unknown function; HET: HEM; 2.50A {Silicibacter pomeroyi}
Probab=32.41 E-value=30 Score=21.13 Aligned_cols=18 Identities=17% Similarity=-0.193 Sum_probs=14.1
Q ss_pred CcchHHHHHHHHHHHHHH
Q psy4805 3 CGSCSNENAYKNIFIWYQ 20 (159)
Q Consensus 3 sGseA~e~AlklA~~~~~ 20 (159)
+=-|.-++|+||||..-.
T Consensus 13 TPeeG~~LAvklaR~~vk 30 (76)
T 2oyy_A 13 TPQEGFDLAVKLSRIAVK 30 (76)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh
Confidence 445788999999998753
No 226
>2rod_B NOXA, noxaa; MCL-1, apoptosis, BH3-only, BCL-2, cytoplasm, developmental protein, differentiation, membrane, mitochondrion, nucleus, phosphoprotein; NMR {Mus musculus}
Probab=30.55 E-value=21 Score=16.88 Aligned_cols=14 Identities=43% Similarity=0.463 Sum_probs=11.5
Q ss_pred CCHHHHHHHHHHhc
Q psy4805 145 GSNYFFQQLQKIGK 158 (159)
Q Consensus 145 pp~~fl~~lr~lc~ 158 (159)
.|++|...||++-+
T Consensus 3 lppefaaqlrkigd 16 (27)
T 2rod_B 3 LPPEFAAQLRKIGD 16 (27)
T ss_dssp CCTHHHHHHHHHHH
T ss_pred CChHHHHHHHHhCC
Confidence 57899999998865
No 227
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: NAD 1PE; 2.15A {Escherichia coli}
Probab=29.70 E-value=28 Score=28.14 Aligned_cols=32 Identities=9% Similarity=0.186 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCchhhhhhhhhccCCCCCCceEEEEcCCCCccchh
Q psy4805 4 GSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLG 64 (159)
Q Consensus 4 GseA~e~AlklA~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~r~~Ii~~~~sYHG~T~g 64 (159)
+..|+|.|++.||++ | .-+|+.++|+|=...+
T Consensus 116 ~~~am~~aiekAk~~------G-----------------------ig~v~vrns~H~G~~g 147 (385)
T 2g8y_A 116 AHEAMALGIEKAHQH------G-----------------------IAAVALHNSHHIGRIG 147 (385)
T ss_dssp HHHHHHHHHHHHHHH------S-----------------------EEEEEEEEEECCCCHH
T ss_pred HHHHHHHHHHHHHHc------C-----------------------EEEEEEeCCCCcchHH
Confidence 467999999999988 3 5789999999976644
No 228
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=26.13 E-value=29 Score=26.57 Aligned_cols=30 Identities=7% Similarity=0.184 Sum_probs=16.4
Q ss_pred EEEEEcccccCCCCccCCHHHHHHHHHHhc
Q psy4805 129 AGIVVEPIQSEGGDNHGSNYFFQQLQKIGK 158 (159)
Q Consensus 129 AAvI~EPiqG~gGv~~pp~~fl~~lr~lc~ 158 (159)
.-++++|+++..|-...++++.+.+++|+.
T Consensus 112 ~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~ 141 (300)
T 3zs7_A 112 LTFICDPVMGDDGIMYCKKEVLDAYRELVP 141 (300)
T ss_dssp CEEEECCCC---------CTHHHHHHHHGG
T ss_pred ceEEEccccccCCCeecCHHHHHHHHHHhh
Confidence 358999999976644457788888887653
No 229
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=25.82 E-value=22 Score=21.29 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=13.6
Q ss_pred cCCHHHHHHHHHHhcC
Q psy4805 144 HGSNYFFQQLQKIGKK 159 (159)
Q Consensus 144 ~pp~~fl~~lr~lc~~ 159 (159)
++...|++.+|.|+||
T Consensus 34 I~l~~ylK~vR~LaRe 49 (65)
T 2f6m_A 34 IPLDTFVKQGRELARQ 49 (65)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4568999999999985
No 230
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=21.43 E-value=1.7e+02 Score=21.91 Aligned_cols=43 Identities=9% Similarity=0.209 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccC-CCCc-cCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSE-GGDN-HGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~-gGv~-~pp~~fl~~lr~lc~ 158 (159)
++.+.+.+++. ++ .-++++|+++. |+.. ..+++..+.+++++.
T Consensus 89 i~~v~~~l~~~---~~--~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~ 133 (282)
T 3h74_A 89 CQQITTYLEQQ---TL--SLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQ 133 (282)
T ss_dssp HHHHHHHHHHS---CC--SEEEECCCCEETTEECTTCCHHHHHHHHHHGG
T ss_pred HHHHHHHHHHC---CC--CcEEEcCeeecCCCCCCCCCHHHHHHHHHHhc
Confidence 55666666654 11 35899999886 4423 357888888887753
No 231
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=20.86 E-value=1.6e+02 Score=23.80 Aligned_cols=47 Identities=6% Similarity=0.049 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCCccCCHHHHHHHHHHhcC
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK 159 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv~~pp~~fl~~lr~lc~~ 159 (159)
+++|++.+..... ..++.+|++.-.+.-.|. +.+.+-+++|.++|++
T Consensus 220 ~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~-v~s~~~l~~i~~la~~ 266 (498)
T 3ihj_A 220 VNELRRAVQEAKD-HCDPKVLCIINPGNPTGQ-VQSRKCIEDVIHFAWE 266 (498)
T ss_dssp HHHHHHHHHHHTT-TSEEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhc-cCCCeEEEEECCCCCCCC-cCCHHHHHHHHHHHHH
Confidence 6778788776421 114667777644555665 4567889999999964
No 232
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=20.14 E-value=1.8e+02 Score=21.82 Aligned_cols=45 Identities=18% Similarity=0.379 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEcccccCCCC--ccCCHHHHHHHHHHhc
Q psy4805 111 LAEVEDLITKYNKKGTPVAGIVVEPIQSEGGD--NHGSNYFFQQLQKIGK 158 (159)
Q Consensus 111 ~~~le~~i~~~~~~~~~vAAvI~EPiqG~gGv--~~pp~~fl~~lr~lc~ 158 (159)
++.+.+.+++.. ..-.-+|++|+.+..|- ...+++..+.+++|+.
T Consensus 92 i~~v~~~l~~~~---~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~ 138 (291)
T 3mbh_A 92 IQIVSDFIKDFR---QPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLIT 138 (291)
T ss_dssp HHHHHHHHHHHC---CTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhc---CCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhc
Confidence 455666666542 11135899999886542 2357888888877753
Done!