BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy481
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P47968|RPIA_MOUSE Ribose-5-phosphate isomerase OS=Mus musculus GN=Rpia PE=2 SV=2
Length = 303
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 111/139 (79%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQL 65
EEAK++A++ AV+++V NN +GIGSGST+V+AV R+AER+K E L ++C+PTSFQARQL
Sbjct: 72 EEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQL 131
Query: 66 ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADH 125
IL+ + L DL+ HP++ IDGADEVD L LIKGGGGCLTQEKIVA + ++IAD
Sbjct: 132 ILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADF 191
Query: 126 TKQSKNLGDRYKKGIPIEV 144
K SKNLGDR+ KGIPIEV
Sbjct: 192 RKDSKNLGDRWHKGIPIEV 210
>sp|A2TLM1|RPIA_PIG Ribose-5-phosphate isomerase OS=Sus scrofa GN=RPIA PE=2 SV=1
Length = 306
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 111/139 (79%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQL 65
EEAK++A AV+++V NN +GIGSGST+V+AV R+AER+K E L ++C+PTSFQARQL
Sbjct: 75 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLICIPTSFQARQL 134
Query: 66 ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADH 125
IL++ + L DL+ HP++ IDGADEVD +L LIKGGGGCLTQEKIVA + ++IAD
Sbjct: 135 ILQHGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADF 194
Query: 126 TKQSKNLGDRYKKGIPIEV 144
K SKNLGD++ KGIPIEV
Sbjct: 195 RKDSKNLGDQWHKGIPIEV 213
>sp|Q3T186|RPIA_BOVIN Ribose-5-phosphate isomerase (Fragment) OS=Bos taurus GN=RPIA PE=2
SV=2
Length = 264
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 111/139 (79%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQL 65
EEAK++A AV+++V NN +GIGSGST+V+AV R+AER++ E LK+VC+PTSFQARQL
Sbjct: 33 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVEQENLKLVCIPTSFQARQL 92
Query: 66 ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADH 125
IL+ + L DL+ HP++ IDGADEVD +L LIKGGGGCLTQEKIVA + ++IAD
Sbjct: 93 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADF 152
Query: 126 TKQSKNLGDRYKKGIPIEV 144
K SKNLGD++ KGIPIEV
Sbjct: 153 RKDSKNLGDQWHKGIPIEV 171
>sp|P49247|RPIA_HUMAN Ribose-5-phosphate isomerase OS=Homo sapiens GN=RPIA PE=1 SV=3
Length = 311
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 110/139 (79%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQL 65
EEAK++A AV+++V NN +GIGSGST+V+AV R+AER+K E L +VC+PTSFQARQL
Sbjct: 79 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQL 138
Query: 66 ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADH 125
IL+ + L DL+ HP++ IDGADEVD +L LIKGGGGCLTQEKIVA + ++IAD
Sbjct: 139 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADF 198
Query: 126 TKQSKNLGDRYKKGIPIEV 144
K SKNLGD++ KGIPIEV
Sbjct: 199 RKDSKNLGDQWHKGIPIEV 217
>sp|Q551C2|RPIA_DICDI Ribose-5-phosphate isomerase OS=Dictyostelium discoideum GN=rpiA
PE=3 SV=1
Length = 232
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTSFQAR 63
++ K++AAY+AVDD V + +GIGSGST+ YAVDR IK LK ++CVPTSFQ+
Sbjct: 3 LDNCKKVAAYKAVDDFVKDGCKIGIGSGSTIKYAVDR----IKELGLKNVICVPTSFQST 58
Query: 64 QLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIA 123
QLI++ + L DL P+L IDGADEVD++ LIKGGGGC QEKIVA + KLVI+A
Sbjct: 59 QLIVEAGLELSDLSRTPELDITIDGADEVDKDFNLIKGGGGCQLQEKIVAYSSKKLVIVA 118
Query: 124 DHTKQSKNLGDRYKKGIPIEVSYHTVPPILYR 155
DHTK+S LG+ +KKGIPIEV P++ +
Sbjct: 119 DHTKESTELGENWKKGIPIEVVPMAYVPVMKK 150
>sp|A3LP13|RPIA_PICST Ribose-5-phosphate isomerase OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=RKI1 PE=3 SV=1
Length = 237
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 110/160 (68%), Gaps = 6/160 (3%)
Query: 3 NLVEEAKRIAAYQAVDDNV-LNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQ 61
+LVE+AK+ AAYQAVD+N ++ VGIGSGSTVVY +R+ + A K VC+PT FQ
Sbjct: 5 SLVEQAKKSAAYQAVDENFPVSAKVVGIGSGSTVVYVAERIGQL--ANKDSFVCIPTGFQ 62
Query: 62 ARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVI 121
++QLI+ N + LG +E P++ DGADEVD L LIKGGG CL QEK+VA+ V+
Sbjct: 63 SKQLIIDNGLKLGAIEQFPEIDIAFDGADEVDPALNLIKGGGACLFQEKLVAASAKTFVV 122
Query: 122 IADHTKQSKNLGDRYKKGIPIEV---SYHTVPPILYRSGS 158
+AD+ K+S NLG ++K+G+PIE+ SY V L + G+
Sbjct: 123 VADYRKKSDNLGIQWKQGVPIEIVPNSYAKVIQDLKKLGA 162
>sp|A7TLF7|RPIA_VANPO Ribose-5-phosphate isomerase OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=RKI1 PE=3 SV=1
Length = 259
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 106/152 (69%), Gaps = 8/152 (5%)
Query: 1 MTNLVEEAKRIAAYQAVDDNV--LNNTAVGIGSGSTVVYAVDRLAERIKAEKL-----KI 53
++N +E+AKR+AAY+AVD+NV N +GIGSGSTVVY +RL + +K K +
Sbjct: 13 LSNPLEDAKRLAAYRAVDENVDFQNERVIGIGSGSTVVYVAERLGQYLKDPKYTKYVSQF 72
Query: 54 VCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVA 113
VC+PT FQ+R LIL N + L ++ HP + DGADEVD NL LIKGGG CL QEK+V+
Sbjct: 73 VCIPTGFQSRALILDNGLQLDSIDHHPIIDIAFDGADEVDVNLQLIKGGGACLFQEKLVS 132
Query: 114 SCTPKLVIIADHTKQS-KNLGDRYKKGIPIEV 144
+ + +++ADH KQS + LG +++G+PIEV
Sbjct: 133 TSAKRFIVVADHRKQSPQYLGKNWRQGVPIEV 164
>sp|A5DXV6|RPIA_LODEL Ribose-5-phosphate isomerase OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=RKI1 PE=3 SV=1
Length = 284
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 104/145 (71%), Gaps = 4/145 (2%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNTAV-GIGSGSTVVYAVDRLAERIKAEKLKIVCVPTS 59
MTN +E AK++AAY+AVD+N+ + V GIGSGSTVVY +R+ + K VC+ T
Sbjct: 36 MTN-IEAAKKLAAYRAVDENLPPHAKVIGIGSGSTVVYVAERIGQL--PNKDDFVCISTG 92
Query: 60 FQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKL 119
FQ++QLI+ N + LG +E HP + DGADEVD L LIKGGG CL QEK+VAS + KL
Sbjct: 93 FQSKQLIIDNGLKLGQIEQHPSIDIAFDGADEVDPQLNLIKGGGACLFQEKLVASASDKL 152
Query: 120 VIIADHTKQSKNLGDRYKKGIPIEV 144
+I+AD KQSK+LG +++G+PIEV
Sbjct: 153 IIVADFRKQSKHLGQNWRQGVPIEV 177
>sp|Q5AJ92|RPIA_CANAL Ribose-5-phosphate isomerase OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RKI1 PE=3 SV=1
Length = 263
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Query: 2 TNLVEEAKRIAAYQAVDDNVLNNTAV-GIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSF 60
T+ VE AK++AAY+AVD+N + V GIGSGSTV+YA +R+ + K +C+PT F
Sbjct: 27 TSKVESAKKLAAYKAVDENFPKDAKVIGIGSGSTVIYAAERIGQL--DNKDSFICIPTGF 84
Query: 61 QARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLV 120
Q++QLI+ N + LG +E +PD+ DGADEVD L LIKGGG CL QEK+VA+ K V
Sbjct: 85 QSKQLIIDNGLRLGTIEQYPDIDIAFDGADEVDPQLNLIKGGGACLFQEKLVAASAKKFV 144
Query: 121 IIADHTKQSKNLGDRYKKGIPIEVSYHTVPPIL 153
++AD+ K+S LG +++G+PIE+ ++ I+
Sbjct: 145 VVADYRKKSDKLGQSWRQGVPIEIVPNSYSKII 177
>sp|Q6CTD5|RPIA_KLULA Ribose-5-phosphate isomerase OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RKI1 PE=3 SV=1
Length = 274
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNT--AVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPT 58
+ + +E+AKRIAAY+AVD+N T VG+GSG+TVVY +RL E + EK VC+PT
Sbjct: 36 LADQLEQAKRIAAYRAVDENFDAKTHKVVGVGSGTTVVYVAERLGEYMD-EKTNFVCIPT 94
Query: 59 SFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPK 118
FQ++QLIL N + LG +E P++ DGADEVD L LIKGGG CL QEK+V++ K
Sbjct: 95 GFQSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKK 154
Query: 119 LVIIADHTKQS-KNLGDRYKKGIPIEV 144
+++AD K+S K LG +KKG+PIEV
Sbjct: 155 FIVVADSRKKSPKYLGTNWKKGVPIEV 181
>sp|Q12189|RPIA_YEAST Ribose-5-phosphate isomerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RKI1 PE=1 SV=1
Length = 258
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 8/152 (5%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVL--NNTAVGIGSGSTVVYAVDRLAERIKAEKL-----KI 53
+ N +E+AKR AAY+AVD+N+ ++ +GIGSGSTVVY +R+ + + K K
Sbjct: 14 LGNPLEDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKF 73
Query: 54 VCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVA 113
+C+PT FQ+R LIL N + LG +E +P + DGADEVDENL LIKGGG CL QEK+V+
Sbjct: 74 ICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVS 133
Query: 114 SCTPKLVIIADHTKQS-KNLGDRYKKGIPIEV 144
+ +++AD K+S K+LG +++G+PIE+
Sbjct: 134 TSAKTFIVVADSRKKSPKHLGKNWRQGVPIEI 165
>sp|A6ZNU5|RPIA_YEAS7 Ribose-5-phosphate isomerase OS=Saccharomyces cerevisiae (strain
YJM789) GN=RKI1 PE=3 SV=1
Length = 258
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 8/152 (5%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVL--NNTAVGIGSGSTVVYAVDRLAERIKAEKL-----KI 53
+ N +E+AKR AAY+AVD+N+ ++ +GIGSGSTVVY +R+ + + K K
Sbjct: 14 LGNPLEDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKF 73
Query: 54 VCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVA 113
+C+PT FQ+R LIL N + LG +E +P + DGADEVDENL LIKGGG CL QEK+V+
Sbjct: 74 ICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVS 133
Query: 114 SCTPKLVIIADHTKQS-KNLGDRYKKGIPIEV 144
+ +++AD K+S K+LG +++G+PIE+
Sbjct: 134 TSAKTFIVVADSRKKSPKHLGKNWRQGVPIEI 165
>sp|Q6FLF8|RPIA_CANGA Ribose-5-phosphate isomerase OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RKI1
PE=3 SV=1
Length = 260
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 105/153 (68%), Gaps = 10/153 (6%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLN---NTAVGIGSGSTVVYAVDRLAERIKAEKL-----K 52
+ N +E+AKR AAY+AVD+N LN + +G+GSGSTVVY +R+ + +K EK K
Sbjct: 15 LGNPLEDAKRAAAYRAVDEN-LNFDEHRIIGVGSGSTVVYVAERIGQYLKDEKYHDKVSK 73
Query: 53 IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIV 112
+C+PT +Q+R LI N ++LG +E HP + DGADEVD NL LIKGGG CL QEK+V
Sbjct: 74 FICIPTGYQSRNLIQDNGLILGSIEQHPHVDIAFDGADEVDHNLQLIKGGGACLFQEKLV 133
Query: 113 ASCTPKLVIIADHTKQSK-NLGDRYKKGIPIEV 144
++ +++AD K+S NLG +K+G+PIE+
Sbjct: 134 STSAKIFIVVADSRKKSDTNLGINWKRGVPIEI 166
>sp|Q6BYI4|RPIA_DEBHA Ribose-5-phosphate isomerase OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RKI1 PE=3 SV=2
Length = 252
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 2 TNLVEEAKRIAAYQAVDDNVLNNT-AVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSF 60
+LVE+AK+ AAYQAVD+N VG+GSGSTV+Y +R+++ E VCVPT F
Sbjct: 18 ASLVEKAKKSAAYQAVDENFPEGAKVVGVGSGSTVIYVAERISQLKNKESF--VCVPTGF 75
Query: 61 QARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLV 120
Q++QLI+ + LG +E +P++ DGADEVD L LIKGGG CL QEK+VA+ K V
Sbjct: 76 QSKQLIIDAGLRLGTIEQYPEVDIAFDGADEVDTELNLIKGGGACLFQEKLVAAAASKFV 135
Query: 121 IIADHTKQS-KNLGDRYKKGIPIEV 144
I+AD K+S LG +++KG+PIE+
Sbjct: 136 IVADFRKRSPSKLGIQWRKGVPIEI 160
>sp|Q9UTL3|RPIA_SCHPO Ribose-5-phosphate isomerase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rki1 PE=3 SV=1
Length = 274
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 6/158 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAV-GIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQAR 63
+E AKR+A + AVD+N N V GIGSGSTVVY V+RL + + +V +PT FQ++
Sbjct: 13 IELAKRLACHMAVDENYPENPKVIGIGSGSTVVYVVERLLTKPGVDS--VVFIPTGFQSK 70
Query: 64 QLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIA 123
QLI+ N + LGD + +P++ DGADEVD+NL IKGGG CL QEK++A +LVI+A
Sbjct: 71 QLIVNNGLRLGDPDCYPNVDVSFDGADEVDDNLQCIKGGGACLFQEKLIAFLAKRLVIVA 130
Query: 124 DHTKQSKNLGDRYKKGIPIEV---SYHTVPPILYRSGS 158
D K S LG+ +KKG+PIEV +Y ++ P L G+
Sbjct: 131 DSRKNSHVLGEYWKKGVPIEVMPMAYASILPQLVELGA 168
>sp|Q75CJ6|RPIA_ASHGO Ribose-5-phosphate isomerase OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RKI1 PE=3
SV=1
Length = 255
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
Query: 1 MTNLVEEAKRIAAYQAVDDNV--LNNTAVGIGSGSTVVYAVDRLAERIKAEKLK----IV 54
+ + +E+AKR A+Y+AVD+N+ + VGIGSGSTVVY +R+ + + +LK +
Sbjct: 12 LGDALEDAKRAASYRAVDENLDPAKHRVVGIGSGSTVVYVAERIGKYQASPELKAKVEFI 71
Query: 55 CVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVAS 114
C+PT FQ+RQLIL N + LG +E +P++ DGADEVD L LIKGGG CL QEK+V++
Sbjct: 72 CIPTGFQSRQLILDNGLRLGSIEQYPEVDIAFDGADEVDPELNLIKGGGACLFQEKLVST 131
Query: 115 CTPKLVIIADHTKQS-KNLGDRYKKGIPIEV 144
+ + +++AD K+S + LG + +G+P+EV
Sbjct: 132 SSAQFIVVADSRKRSPQRLGTSWTRGVPVEV 162
>sp|A5DFH6|RPIA_PICGU Ribose-5-phosphate isomerase OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=RKI1 PE=3 SV=2
Length = 247
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNT-AVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTS 59
M++ +E AKR+AAY+AVD N + VGIGSGSTVVY +R+ + K VC+ T
Sbjct: 12 MSSGIEHAKRMAAYKAVDANFPPHAKVVGIGSGSTVVYVAERIGQL--KNKHDFVCISTG 69
Query: 60 FQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKL 119
FQ++QLI+ N + LG +E P + DGADEVD NL LIKGGG CL QEK+VAS K
Sbjct: 70 FQSKQLIIDNGLTLGAIEQFPKVDIAFDGADEVDTNLNLIKGGGACLFQEKLVASSADKF 129
Query: 120 VIIADHTKQS-KNLGDRYKKGIPIEV 144
+++AD K+S +LG ++KG+PIEV
Sbjct: 130 IVVADTRKKSPSDLGIAWRKGVPIEV 155
>sp|P41994|RPIA_CAEEL Probable-ribose 5-phosphate isomerase OS=Caenorhabditis elegans
GN=rpia-1 PE=3 SV=1
Length = 251
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTSFQAR 63
+E+AK+ AA+ + V + +G+GSGSTV Y V+ L + + LK I+CVPTSF +
Sbjct: 14 IEQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTK 73
Query: 64 QLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIA 123
Q ++++ + + DL++HP+L IDGADEVD IKGGGGCL QEKIV + +IA
Sbjct: 74 QWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIA 133
Query: 124 DHTKQSKNLGDRYKKGIPIEVSYHTVPPIL 153
D+ K SK+LGDRY +PIEV P+L
Sbjct: 134 DYLKDSKHLGDRYPN-VPIEVLPLAAQPLL 162
>sp|Q6CFH4|RPIA_YARLI Ribose-5-phosphate isomerase OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=RKI1 PE=3 SV=1
Length = 243
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 100/160 (62%), Gaps = 6/160 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNT-AVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQAR 63
+E+AKRIAA+QAV+ + + VGIGSGSTVVY +++A K V + T FQ++
Sbjct: 8 LEQAKRIAAHQAVEQHYPKDAKVVGIGSGSTVVYVAEKIASLPKELTKDTVFISTGFQSK 67
Query: 64 QLILKNNMVLG--DLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVI 121
QLI + LG D ++ DL DGADE D L IKGGG CL QEKIVA C K V+
Sbjct: 68 QLIQNAGLRLGCIDQYSNGDLDVAFDGADETDPQLNCIKGGGACLFQEKIVAECARKFVV 127
Query: 122 IADHTKQSKNLGDRYKKGIPIEV---SYHTVPPILYRSGS 158
+AD+ KQSK LG + +GIPIEV +Y+ V L + G+
Sbjct: 128 VADYRKQSKALGTVWIQGIPIEVVPDAYNKVIADLKKMGA 167
>sp|Q4P6V4|RPIA_USTMA Ribose-5-phosphate isomerase OS=Ustilago maydis (strain 521 / FGSC
9021) GN=RKI1 PE=3 SV=1
Length = 286
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 82/127 (64%)
Query: 27 VGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVI 86
+GIGSGSTV Y V+R+A++ A K VPT FQ+R+LI+ + LGD+++ P + I
Sbjct: 57 IGIGSGSTVPYVVERIAQQGPAVNAKRWFVPTGFQSRELIINAGLRLGDVDSFPSIDVTI 116
Query: 87 DGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVSY 146
DGADEVD L IKGGG C +EK++A + V++AD+ K LG ++ +G+PIEV+
Sbjct: 117 DGADEVDNALNCIKGGGACHLREKVLAEAANEFVVVADYRKNGSQLGTKWLQGVPIEVAP 176
Query: 147 HTVPPIL 153
+L
Sbjct: 177 FAYAKVL 183
>sp|P0CR18|RPIA_CRYNJ Ribose-5-phosphate isomerase OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RKI1 PE=3 SV=1
Length = 302
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 8/144 (5%)
Query: 27 VGIGSGSTVVYAVDR-LAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCV 85
+GIGSGSTV Y VDR LA+ +A K + V +PT FQ+++LI+K + LGD++ + +
Sbjct: 77 IGIGSGSTVPYVVDRILAQGFEANKDR-VFLPTGFQSKELIVKAGLTLGDVDQYARIDVT 135
Query: 86 IDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEV- 144
IDGADEVD L IKGGG C +EK++A +I+AD+ K S+ LG + KGIPIEV
Sbjct: 136 IDGADEVDNELNSIKGGGACQLREKVLAEAADTWIIVADYRKNSEVLGTSWTKGIPIEVV 195
Query: 145 --SYHTVPPILYRSGSG---PDGQ 163
+Y V L GS P+GQ
Sbjct: 196 PFAYAKVLTNLAHMGSPHVLPNGQ 219
>sp|P0CR19|RPIA_CRYNB Ribose-5-phosphate isomerase OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RKI1 PE=3 SV=1
Length = 302
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 8/144 (5%)
Query: 27 VGIGSGSTVVYAVDR-LAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCV 85
+GIGSGSTV Y VDR LA+ +A K + V +PT FQ+++LI+K + LGD++ + +
Sbjct: 77 IGIGSGSTVPYVVDRILAQGFEANKDR-VFLPTGFQSKELIVKAGLTLGDVDQYARIDVT 135
Query: 86 IDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEV- 144
IDGADEVD L IKGGG C +EK++A +I+AD+ K S+ LG + KGIPIEV
Sbjct: 136 IDGADEVDNELNSIKGGGACQLREKVLAEAADTWIIVADYRKNSEVLGTSWTKGIPIEVV 195
Query: 145 --SYHTVPPILYRSGSG---PDGQ 163
+Y V L GS P+GQ
Sbjct: 196 PFAYAKVLTNLAHMGSPHVLPNGQ 219
>sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana
GN=At2g01290 PE=2 SV=1
Length = 265
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTSFQARQ 64
+E KRIAAY+AV+ V + +G+G+GST +AVDR+ E ++ KL+ IV +PTS + ++
Sbjct: 34 DELKRIAAYKAVE-FVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQE 92
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + L DL+ HP + IDGADEVD L L+KG GG L +EK++ + K V+I D
Sbjct: 93 QALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVD 152
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
+K K++G K +P+E+
Sbjct: 153 DSKMVKHIGGS-KLALPVEI 171
>sp|Q7V003|RPIA_PROMP Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rpiA PE=3 SV=1
Length = 231
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTSFQARQLIL 67
K+I A A+++ V + +G+GSGST + LAE+I++ KLK I VPTSFQ+ L L
Sbjct: 2 KQIVADSAIEE-VEDGMILGLGSGSTAALMIKSLAEKIRSGKLKNIKGVPTSFQSEVLAL 60
Query: 68 KNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTK 127
+ N+ L DL + P + IDGADEVD + LIKGGG C +EK+VAS KL+I+ D +K
Sbjct: 61 ELNIPLIDLASVPYIDLAIDGADEVDPDFQLIKGGGACHVREKLVASKANKLLIVIDESK 120
Query: 128 QSKNLGDRYKKGIPIEV 144
+NL + +P+EV
Sbjct: 121 LVQNLNQVFP--LPVEV 135
>sp|Q8TQ69|RPIA_METAC Ribose-5-phosphate isomerase A OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpiA
PE=3 SV=1
Length = 234
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 6 EEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQL 65
+ A IAA V +L VG+G+GSTV Y + L R++ E L I+ V TS+Q+ L
Sbjct: 13 KRAAGIAAAGLVSSGML----VGLGTGSTVAYTIKELGRRVREEGLDILGVVTSYQSEML 68
Query: 66 ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADH 125
++ + L L HP+L IDGAD++D L IKGGG T+EKIV+ + V++AD
Sbjct: 69 AIEAGIRLTTLAQHPELDLAIDGADQIDSELRAIKGGGAAHTREKIVSVSARRFVVVADE 128
Query: 126 TKQSKNLGDRYKKGIPIEVSYHTVPPILYR 155
+K SK L K +P+EV P++ +
Sbjct: 129 SKTSKQL----DKLVPVEVLPFAKEPVVKK 154
>sp|Q6G3V6|RPIA_BARHE Ribose-5-phosphate isomerase A OS=Bartonella henselae (strain ATCC
49882 / Houston 1) GN=rpiA PE=1 SV=1
Length = 234
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
V++ K++AA +A++ V ++ +GIGSGSTV + L ER+ A L++ CV TS + Q
Sbjct: 3 VQQLKKMAALKALE-FVEDDMRLGIGSGSTVNEFIPLLGERV-ANGLRVTCVATSQYSEQ 60
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L K + + LE P+L IDGADE+ + LIKGGGG L EKIVAS + + +IAD
Sbjct: 61 LCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIAD 120
Query: 125 HTKQSKNLGDRYKKGIPIEVS 145
TK K LG +PIEV+
Sbjct: 121 ETKMVKTLG---AFALPIEVN 138
>sp|Q8Q0R3|RPIA_METMA Ribose-5-phosphate isomerase A OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpiA PE=3 SV=1
Length = 234
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 21 VLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHP 80
V + VG+G+GSTV Y + L R+K E L I+ V TS+Q+ L + + L L P
Sbjct: 24 VSSGMVVGLGTGSTVAYTIKELGRRVKEEGLDILGVVTSYQSEMLAIDAGIRLTTLSQDP 83
Query: 81 DLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGI 140
+L IDGAD++D NL IKGGG T+EKIV+ + V++AD +K S L K +
Sbjct: 84 ELDIAIDGADQIDSNLYTIKGGGAAHTREKIVSVSAKRFVVVADDSKTSTQL----DKPV 139
Query: 141 PIEVSYHTVPPILYR 155
P+EV P + R
Sbjct: 140 PVEVLPFAKEPAVNR 154
>sp|Q1GX07|RPIA_SPHAL Ribose-5-phosphate isomerase A OS=Sphingopyxis alaskensis (strain
DSM 13593 / LMG 18877 / RB2256) GN=rpiA PE=3 SV=1
Length = 228
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSF 60
M+N V E K IAA +AVD+ V + VG+G+GST YAV L+ERIK L+I V TS
Sbjct: 1 MSNFVAE-KSIAAVRAVDE-VRDGMLVGLGTGSTAAYAVKSLSERIK-HGLRITAVATSQ 57
Query: 61 QARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLV 120
L L+ + L + + IDGADE+D+ IKGGGG L +EKI S + +++
Sbjct: 58 ATEALALRLAVPLVPFQQLSAVDLTIDGADEIDDRFQAIKGGGGALLREKITESASTRVI 117
Query: 121 IIADHTKQSKNLGDRYKKGIPIEV 144
IIAD +K LG K +P+EV
Sbjct: 118 IIADSSKLVAQLG---KFPLPVEV 138
>sp|A6U9T4|RPIA_SINMW Ribose-5-phosphate isomerase A OS=Sinorhizobium medicae (strain
WSM419) GN=rpiA PE=3 SV=1
Length = 231
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 4/136 (2%)
Query: 10 RIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKN 69
+I A +A ++V N +GIG+GST V LAE++ A +I VPTS + +L L+
Sbjct: 7 KIKAAEAALEHVENGMRLGIGTGSTAEEFVRVLAEKV-ASGFQISGVPTSERTARLCLEL 65
Query: 70 NMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQS 129
+ L L+ P+L IDGADEVD L LIKGGGG L +EKIVAS + ++++IAD TK
Sbjct: 66 GVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASARMIVIADETKVV 125
Query: 130 KNLGDRYKKGIPIEVS 145
LG +K +PIEV+
Sbjct: 126 DVLG-AFK--LPIEVN 138
>sp|A6UUZ8|RPIA_META3 Ribose-5-phosphate isomerase A OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpiA PE=3 SV=1
Length = 234
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
VE R+ A + + VG+GSG+T + L ++I E L + VPTSF++R
Sbjct: 9 VEADPRLNAVNEALKFIKDGMIVGLGSGTTANLFIAELGKKISEEGLNVFGVPTSFESRM 68
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVD-ENLVLIKGGGGCLTQEKIVASCTPKLVIIA 123
+ ++ + L L+ + +L +DGADEV+ E L +IKGGGGC TQEKI+ C +L+II
Sbjct: 69 MAIQYGIPLVSLDEYGELDIAVDGADEVNKETLNVIKGGGGCHTQEKIIDYCAKELIIIV 128
Query: 124 DHTKQSKNLGDRYKKGIPIEV---SYHTVPPILYRSGSGP 160
D +K +LG+ +P+EV +Y +V L + S P
Sbjct: 129 DESKLVDSLGENTP--VPLEVLPFAYSSVLNELLKMNSAP 166
>sp|Q81CG8|RPIA_BACCR Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=rpiA PE=3 SV=1
Length = 220
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 27 VGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVI 86
+G+G+GSTV + + +L ER+K E L VPTS + L + N+ L L L I
Sbjct: 21 IGLGTGSTVYWTIQKLGERVK-EGLSFQAVPTSKETEALAQQLNIPLISLNDVQSLDLTI 79
Query: 87 DGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEV 144
DGADE+D NL LIKGGGG L +EKIVAS + KL+IIAD +K +LG +PIE+
Sbjct: 80 DGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESKLVTHLGTF---PLPIEI 134
>sp|Q58998|RPIA_METJA Ribose-5-phosphate isomerase A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=rpiA PE=1 SV=1
Length = 226
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 10/161 (6%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSF 60
M+N E+ K A +AV V + +G+G+GST + L RI+ E+L + +PTSF
Sbjct: 1 MSN--EDLKLKVAKEAVK-LVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSF 57
Query: 61 QARQLILKNNMVLGDLETHPDLSCVIDGADEVDEN-LVLIKGGGGCLTQEKIVASCTPKL 119
+A+ L ++ + L L+ + D+ DGADEV+E L LIKGGGGC TQEKIV +
Sbjct: 58 EAKMLAMQYEIPLVTLDEY-DVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEF 116
Query: 120 VIIADHTKQSKNLGDRYKKGIPIEV---SYHTVPPILYRSG 157
V++ D +K K LG+++ IP+EV +Y V L G
Sbjct: 117 VVLVDESKLVKKLGEKFP--IPVEVIPSAYRVVIRALSEMG 155
>sp|Q5FQ98|RPIA_GLUOX Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans (strain
621H) GN=rpiA PE=3 SV=1
Length = 231
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILK 68
KR AA +A D V + VG+G+GST Y ++RL ER+ AE L+I +PTS + LK
Sbjct: 10 KRTAAREAAD-MVKSGMVVGLGTGSTAAYMIERLGERV-AEGLEIFGIPTSDDSEDKALK 67
Query: 69 NNMVLGDLETHPDLSCVIDGADEVDE-NLVLIKGGGGCLTQEKIVASCTPKLVIIADHTK 127
+ L D H + IDGADEV +L LIKG GG L +EKIVA + V+I D TK
Sbjct: 68 AGIPLTDFSAHRRIDIAIDGADEVQRGSLNLIKGLGGALLREKIVAQAAKRFVVIVDGTK 127
Query: 128 QSKNLGDRYKKGIPIEV 144
LG+R +P+EV
Sbjct: 128 PVDLLGERAP--VPVEV 142
>sp|P72012|RPIA_METTH Ribose-5-phosphate isomerase A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpiA PE=3 SV=1
Length = 226
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILK 68
K++AA +AVD+ + + VG+G+GST Y ++ L R++ E L+++ VPTS+Q+ L +
Sbjct: 8 KKMAALRAVDE-IDDGDVVGLGTGSTTHYFIEELGRRVREEGLEVMGVPTSYQSMFLAAE 66
Query: 69 NNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQ 128
+ + + L H D+ +DGADEVD +L LIKGGG T EKIV S ++I D +K
Sbjct: 67 SGIKVTSLAEH-DVDVAVDGADEVDPDLNLIKGGGAAHTLEKIVDSSAASFIVIVDESKL 125
Query: 129 SKNLGDRYKKGIPIEVSYHTVPPILY-----------RSGSGPDGQV 164
+ LG +P+EV P+ RS G DG V
Sbjct: 126 VERLG---AFPLPVEVIPAACRPVKLKLESMGASVNIRSSEGKDGPV 169
>sp|Q2JSC9|RPIA_SYNJA Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain
JA-3-3Ab) GN=rpiA PE=3 SV=1
Length = 230
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 20 NVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETH 79
V + VG+G+GST +AV LA+R++ E L+ + VPTS + + + L LE
Sbjct: 18 KVQSGMVVGLGTGSTAAFAVGALAQRMQKEGLQFIGVPTSERTAEQARSLGIPLATLEEQ 77
Query: 80 PDLSCVIDGADEVD-ENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKK 138
P L IDGADE++ +L LIKG GG L +EK+V + +L+IIAD +K+ +LG R+
Sbjct: 78 PRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADASKKVAHLGTRFP- 136
Query: 139 GIPIEV 144
+P+EV
Sbjct: 137 -VPVEV 141
>sp|B1Z896|RPIA_METPB Ribose-5-phosphate isomerase A OS=Methylobacterium populi (strain
ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rpiA PE=3 SV=1
Length = 236
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILK 68
KR AA +A+ V + +GIG+GST + L ER++A L + VPTS R +
Sbjct: 7 KRAAAERAIP-LVEDGMRLGIGTGSTAAAFIALLGERVRA-GLTVTGVPTSEATRIACER 64
Query: 69 NNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQ 128
+ L LE P+L IDGADEVD NL LIKGGG L +EKIVA+ + ++V+IAD +K+
Sbjct: 65 EGIPLATLEELPELDLTIDGADEVDGNLRLIKGGGAALLREKIVAAASRRMVVIADASKR 124
Query: 129 SKNLGDRYKKGIPIEVSYHTV 149
+ LG +P+EV+ +
Sbjct: 125 VETLG---AFPLPVEVNLFGI 142
>sp|A7NNA4|RPIA_ROSCS Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain
DSM 13941 / HLO8) GN=rpiA PE=3 SV=1
Length = 234
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKL-KIVCVPTSFQARQLIL 67
+R AA +A+D V + A+G+G+GST + + LA R+ +L ++V VPTS Q L
Sbjct: 7 RRRAAERALD-YVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLAR 65
Query: 68 KNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTK 127
+ + L L+ HP L +DGADE+D +L LIKG GG + +EKIVA+ + V++A +K
Sbjct: 66 ELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSK 125
Query: 128 QSKNLGDRYKKGIPIEVSYHTVPPILYR 155
+ + LG+R +P+EV +P + R
Sbjct: 126 RVERLGERSP--LPVEVVTFGMPLCIRR 151
>sp|Q736S8|RPIA_BACC1 Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC
10987) GN=rpiA PE=3 SV=1
Length = 220
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 27 VGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVI 86
+G+G+GSTV + +++L ER+K E L VPTS + L + N+ L L L I
Sbjct: 21 IGLGTGSTVYWTIEKLGERVK-EGLSFQAVPTSKETEVLAQQLNIPLISLNDIQSLDLTI 79
Query: 87 DGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEV 144
DGADE+D NL LIKGGGG L +EKIVAS + +L+IIAD +K +LG +P+E+
Sbjct: 80 DGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESKLVTHLGTF---PLPVEI 134
>sp|Q1GF74|RPIA_RUEST Ribose-5-phosphate isomerase A OS=Ruegeria sp. (strain TM1040)
GN=rpiA PE=3 SV=1
Length = 262
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
+++AK +AA +A + V + VG+G+GST + V L E ++ + LKI VPTS + +
Sbjct: 8 IDKAKFVAAKRAAE-LVEDGMRVGLGTGSTAAWLVRCLGEMVREDGLKITGVPTSARTAE 66
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + + L L+ L IDGADE D L LIKGGGG L QEKIVA+ + ++V+IAD
Sbjct: 67 LAREVGIELITLDEARWLDLTIDGADEFDSELNLIKGGGGALLQEKIVATASDQMVVIAD 126
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
K+ + LG +PIEV
Sbjct: 127 KAKEVETLG---AFPLPIEV 143
>sp|B7K6D3|RPIA_CYAP8 Ribose-5-phosphate isomerase A OS=Cyanothece sp. (strain PCC 8801)
GN=rpiA PE=3 SV=1
Length = 237
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 15 QAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTSFQARQLILKNNMVL 73
+A V +++ VG+G+GST YA++ + ER+K+ LK IV V TSFQA L K + L
Sbjct: 17 KAAASRVKSDSIVGLGTGSTTAYAIEYIGERLKSGDLKNIVGVTTSFQAEVLARKYGIPL 76
Query: 74 GDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLG 133
L+ + IDGADEVD N LIKGGG TQEKIV S +++ D K LG
Sbjct: 77 TTLDVIDRIDVAIDGADEVDPNKNLIKGGGAAHTQEKIVDSLAEVFIVVVDSNKLVDKLG 136
Query: 134 DRYKKGIPIEVSYHTVPPILYR 155
+ +P+EV V P++ +
Sbjct: 137 STFL--LPVEVIPKAVTPVMRQ 156
>sp|Q92PB8|RPIA_RHIME Ribose-5-phosphate isomerase A OS=Rhizobium meliloti (strain 1021)
GN=rpiA PE=3 SV=1
Length = 231
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 4/136 (2%)
Query: 10 RIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKN 69
+I A +A ++V + +GIG+GST V LAE++ A +I VPTS + +L L+
Sbjct: 7 KIKAAEAALEHVESGMRLGIGTGSTAEEFVRLLAEKV-ASGFQISGVPTSERTARLCLEL 65
Query: 70 NMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQS 129
+ L L+ P+L IDGADEVD L LIKGGGG L +EKIVAS + ++++IAD +K
Sbjct: 66 GVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVV 125
Query: 130 KNLGDRYKKGIPIEVS 145
LG +K +PIE++
Sbjct: 126 DVLG-AFK--LPIEIN 138
>sp|Q3J101|RPIA_RHOS4 Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain
ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpiA PE=3
SV=1
Length = 262
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
++ AK AA +AVD V + +G+G+GST + V LAER++ E L++ VPTS + +
Sbjct: 8 IDTAKFAAARRAVD-LVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAE 66
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + + L+ L IDGADE D + LIKGGG L QEKIVA+ + ++V+IAD
Sbjct: 67 LARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIAD 126
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
K+ +LG +P+EV
Sbjct: 127 AAKEVAHLG---AFPLPVEV 143
>sp|B9JW57|RPIA_AGRVS Ribose-5-phosphate isomerase A OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=rpiA PE=3 SV=1
Length = 232
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Query: 10 RIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKN 69
+I A + V N +GIG+GST V LAE++ A+ K+ VPTS + +L L+
Sbjct: 7 KIKAAELALSYVENGMRLGIGTGSTAEEFVRLLAEKV-ADGFKVQGVPTSERTARLCLEL 65
Query: 70 NMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQS 129
+ L L+ P+L +DGADE+D +L LIKGGGG L +EKIVA+ + ++++IAD TK
Sbjct: 66 GVPLMSLDELPELDLTVDGADELDRHLTLIKGGGGALLREKIVAAASSRVIVIADETKLV 125
Query: 130 KNLGDRYKKGIPIEVS 145
+ LG Y +PIE++
Sbjct: 126 ETLG-AYP--LPIEIN 138
>sp|B9KKA1|RPIA_RHOSK Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain
KD131 / KCTC 12085) GN=rpiA PE=3 SV=1
Length = 262
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
++ AK AA +AVD V + +G+G+GST + V LAER++ E L++ VPTS + +
Sbjct: 8 IDTAKFAAARRAVD-LVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAE 66
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + + L+ L IDGADE D + LIKGGG L QEKIVA+ + ++V+IAD
Sbjct: 67 LARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIAD 126
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
K+ +LG +P+EV
Sbjct: 127 AAKEVAHLG---AFPLPVEV 143
>sp|C3MDE7|RPIA_RHISN Ribose-5-phosphate isomerase A OS=Rhizobium sp. (strain NGR234)
GN=rpiA PE=3 SV=1
Length = 231
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 4/136 (2%)
Query: 10 RIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILKN 69
+I A QA V + +GIG+GST V LAE++ A +I VPTS + +L L+
Sbjct: 7 KIKAAQAALGYVESGMRLGIGTGSTAEEFVRLLAEKV-ASGFQIQGVPTSERTARLCLEL 65
Query: 70 NMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQS 129
+ L L+ P+L IDGADEVD L LIKGGGG L +EKIVAS + ++++IAD +K
Sbjct: 66 GVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASERMIVIADESKVV 125
Query: 130 KNLGDRYKKGIPIEVS 145
LG +K +PIEV+
Sbjct: 126 DVLG-AFK--LPIEVN 138
>sp|A3PL91|RPIA_RHOS1 Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain
ATCC 17029 / ATH 2.4.9) GN=rpiA PE=3 SV=1
Length = 262
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
++ AK AA +AVD V + +G+G+GST + V LAER++ E L++ VPTS + +
Sbjct: 8 IDTAKFAAARRAVD-LVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAE 66
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + + L+ L IDGADE D + LIKGGG L QEKIVA+ + ++V+IAD
Sbjct: 67 LARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIAD 126
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
K+ +LG +P+EV
Sbjct: 127 AAKEVAHLG---AFPLPVEV 143
>sp|Q6FZP1|RPIA_BARQU Ribose-5-phosphate isomerase A OS=Bartonella quintana (strain
Toulouse) GN=rpiA PE=3 SV=1
Length = 234
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 5/146 (3%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
V++ K+ AA +A++ V ++ +GIG+GST + L ER+ A+ L++ V TS + Q
Sbjct: 3 VQQLKKRAAAKALE-FVQDDMRLGIGTGSTANEFIRLLGERV-ADGLRVTGVATSQYSEQ 60
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L K + + LE P+L IDGADE+ + LIKGGGG L +EKIVA+ + +++IAD
Sbjct: 61 LCRKFGVPVTTLEQMPELDLDIDGADEIGPEMTLIKGGGGALWREKIVAAASRAMLVIAD 120
Query: 125 HTKQSKNLGDRYKKGIPIEVSYHTVP 150
TK K LG +PIEV+ +P
Sbjct: 121 ETKVVKTLG---AFALPIEVNPFGMP 143
>sp|A4WQX2|RPIA_RHOS5 Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain
ATCC 17025 / ATH 2.4.3) GN=rpiA PE=3 SV=1
Length = 250
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 5 VEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQ 64
++ AK AA +AVD V + +G+G+GST + V LAER++ E L++ VPTS + +
Sbjct: 8 IDTAKFAAARRAVD-FVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSSRTAE 66
Query: 65 LILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIAD 124
L + + + L+ L IDGADE D LIKGGG L QEKIVA+ + ++++IAD
Sbjct: 67 LARELGIPVVTLDEARWLDLTIDGADEFDSEFNLIKGGGAALLQEKIVATASDRMIVIAD 126
Query: 125 HTKQSKNLGDRYKKGIPIEV 144
K+ LG +P+EV
Sbjct: 127 AAKEVAQLG---AFPLPVEV 143
>sp|Q7VA25|RPIA_PROMA Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=rpiA PE=3 SV=1
Length = 237
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Query: 1 MTNLVEEAKRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLK-IVCVPTS 59
MT+L + K A +A+ + + + +G+GSGST + L E++K LK I+ VPTS
Sbjct: 1 MTDLQTQMKIAVAQEAIGE-IKDGMILGLGSGSTAALMIKSLGEKLKEGSLKEIIGVPTS 59
Query: 60 FQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKL 119
FQ L + + L + IDGADEVD N LIKGGG C QEK+VAS +
Sbjct: 60 FQGEVLASQLGIPLRAFSAVSKIDLAIDGADEVDPNFQLIKGGGACHVQEKLVASIADRF 119
Query: 120 VIIADHTKQSKNLGDRYKKGIPIEV 144
V++ D TK + L +K +P+EV
Sbjct: 120 VVVVDSTKIVEKLNLEFK--LPVEV 142
>sp|A9W537|RPIA_METEP Ribose-5-phosphate isomerase A OS=Methylobacterium extorquens
(strain PA1) GN=rpiA PE=3 SV=1
Length = 236
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 9 KRIAAYQAVDDNVLNNTAVGIGSGSTVVYAVDRLAERIKAEKLKIVCVPTSFQARQLILK 68
KR AA +A+ V + +GIG+GST + L ER++A LK+ VPTS R +
Sbjct: 7 KRAAAERAIP-LVEDGMRLGIGTGSTAAAFIKLLGERVRA-GLKVTGVPTSEATRIACER 64
Query: 69 NNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQ 128
+ L LE P+L IDGADEVD +L LIKGGG L +EKIVA + ++V+IAD +K
Sbjct: 65 EGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASRRMVVIADASKH 124
Query: 129 SKNLGDRYKKGIPIEVSYHTV 149
+ LG +P+EV+ +
Sbjct: 125 VETLG---AFPLPVEVNLFGI 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,506,059
Number of Sequences: 539616
Number of extensions: 2619498
Number of successful extensions: 7441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6533
Number of HSP's gapped (non-prelim): 560
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 56 (26.2 bits)