Query psy4810
Match_columns 434
No_of_seqs 137 out of 505
Neff 5.7
Searched_HMMs 13730
Date Fri Aug 16 18:20:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4810.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4810hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2shpa3 d.93.1.1 (A:111-218) T 25.4 15 0.0011 27.6 2.0 32 343-374 5-36 (108)
2 d1d4ta_ d.93.1.1 (A:) The Xlp 24.5 6.7 0.00049 29.5 -0.3 34 343-376 9-42 (104)
3 d1jyra_ d.93.1.1 (A:) Growth f 22.4 8.1 0.00059 29.1 -0.2 34 343-376 8-41 (96)
4 d1i3za_ d.93.1.1 (A:) Ews/fli1 22.2 9.4 0.00068 28.9 0.2 34 343-376 8-41 (103)
5 d1luia_ d.93.1.1 (A:) Itk/tsk 18.7 21 0.0015 27.0 1.6 26 343-368 11-36 (108)
6 d2shpa2 d.93.1.1 (A:2-110) Tyr 16.9 12 0.0009 28.5 -0.2 34 343-376 8-41 (109)
7 d2fcia1 d.93.1.1 (A:1-105) Pho 15.1 27 0.0019 26.4 1.4 31 343-374 14-44 (105)
8 d1nrva_ d.93.1.1 (A:) Growth f 15.0 17 0.0012 27.4 0.1 33 343-375 10-43 (105)
9 d1g83a2 d.93.1.1 (A:142-245) T 11.4 44 0.0032 24.6 1.6 32 343-374 11-43 (104)
10 d2cs0a1 d.93.1.1 (A:8-113) Hem 11.4 44 0.0032 24.8 1.6 29 343-372 14-42 (106)
No 1
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.39 E-value=15 Score=27.56 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=25.8
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccCh
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSS 374 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~ 374 (434)
|.+++++.+..++.-+.||.||+|--+...|.
T Consensus 5 G~i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~ 36 (108)
T d2shpa3 5 GHLSGKEAEKLLTEKGKHGSFLVRESQSHPGD 36 (108)
T ss_dssp CSCCHHHHHHHHHHTCCTTEEEEEECSSSTTC
T ss_pred CCCCHHHHHHHHhhcCCCCeEEEEecCCCCCC
Confidence 56799999998887778999999987655554
No 2
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.50 E-value=6.7 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.010 Sum_probs=26.8
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccChhH
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSSLH 376 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~lv 376 (434)
|.+++++.+..++.-+.||.||+|-.+.+.|..+
T Consensus 9 G~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~ 42 (104)
T d1d4ta_ 9 GKISRETGEKLLLATGLDGSYLLRDSESVPGVYC 42 (104)
T ss_dssp CSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEE
T ss_pred cCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEE
Confidence 5679999998887667899999997766666543
No 3
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.36 E-value=8.1 Score=29.09 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=27.2
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccChhH
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSSLH 376 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~lv 376 (434)
+.+++++.+..+.+-+.||.||+|--+.+.|..+
T Consensus 8 g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~ 41 (96)
T d1jyra_ 8 GKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFS 41 (96)
T ss_dssp CSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEE
T ss_pred CCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEE
Confidence 5678999998887777899999998877766543
No 4
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.17 E-value=9.4 Score=28.92 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=26.6
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccChhH
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSSLH 376 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~lv 376 (434)
|.+++++.+..+..-+.||.||+|-.+.+.|..+
T Consensus 8 g~isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~ 41 (103)
T d1i3za_ 8 GCLTKRECEALLLKGGVDGNFLIRDSESVPGALC 41 (103)
T ss_dssp SSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEE
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEecCCCCCCEE
Confidence 5578888888776666899999998777777643
No 5
>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.70 E-value=21 Score=27.00 Aligned_cols=26 Identities=15% Similarity=0.047 Sum_probs=20.9
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHH
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIV 368 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi 368 (434)
+.+++++.+.++..-+.||.||+|--
T Consensus 11 g~isR~eAe~lL~~~~~~G~FLVR~S 36 (108)
T d1luia_ 11 KSISRDKAEKLLLDTGKEGAFMVRDS 36 (108)
T ss_dssp TTCCHHHHHHHHHHHCCTTEEEEEEC
T ss_pred CCCCHHHHHHHHHhcCCCCeEEEEec
Confidence 56789999888865568999999853
No 6
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.90 E-value=12 Score=28.55 Aligned_cols=34 Identities=24% Similarity=0.102 Sum_probs=26.3
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccChhH
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSSLH 376 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~lv 376 (434)
|.+++++.+.++..-+.||.||+|-.....|..+
T Consensus 8 g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~ 41 (109)
T d2shpa2 8 PNITGVEAENLLLTRGVDGSFLARPSKSNPGDLT 41 (109)
T ss_dssp SSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEE
T ss_pred CCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEE
Confidence 5678888888887666799999997766666533
No 7
>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=15.07 E-value=27 Score=26.45 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=23.8
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhccCh
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNLSS 374 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~g~ 374 (434)
|.+++++.+..+..-+.||.||+|-- .+.|.
T Consensus 14 g~i~R~eAe~lL~~~~~~G~FLVR~S-~~~~~ 44 (105)
T d2fcia1 14 ASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNS 44 (105)
T ss_dssp SSSCSHHHHHHHHHSSSSCCEEEEEC-SSTTC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEec-CCCCC
Confidence 56788999888877767999999965 34454
No 8
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.03 E-value=17 Score=27.40 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=25.3
Q ss_pred CCCChHHHHHHHhc-cCCCcEehhHHHHhccChh
Q psy4810 343 GFILDEELKILLEK-LDVGQWFVIDIVRLNLSSL 375 (434)
Q Consensus 343 ~~~~~~~~~~~~~~-l~~dg~FlL~mi~~N~g~l 375 (434)
|.+++++.+..++. -..||.||+|-.+.+.|..
T Consensus 10 g~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y 43 (105)
T d1nrva_ 10 GRISREESHRIIKQQGLVDGLFLLRDSQSNPKAF 43 (105)
T ss_dssp TTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCE
T ss_pred CCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCE
Confidence 56788888888765 4579999999877666653
No 9
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.38 E-value=44 Score=24.64 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=23.7
Q ss_pred CCCChHHHHHHHhc-cCCCcEehhHHHHhccCh
Q psy4810 343 GFILDEELKILLEK-LDVGQWFVIDIVRLNLSS 374 (434)
Q Consensus 343 ~~~~~~~~~~~~~~-l~~dg~FlL~mi~~N~g~ 374 (434)
|.+++++.+..+.. -..||.||+|-.+...|.
T Consensus 11 g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~ 43 (104)
T d1g83a2 11 GKLGRKDAERQLLSFGNPRGTFLIRESETTKGA 43 (104)
T ss_dssp TTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTC
T ss_pred CCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCC
Confidence 56788888887764 457999999976555553
No 10
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.38 E-value=44 Score=24.84 Aligned_cols=29 Identities=28% Similarity=0.319 Sum_probs=21.9
Q ss_pred CCCChHHHHHHHhccCCCcEehhHHHHhcc
Q psy4810 343 GFILDEELKILLEKLDVGQWFVIDIVRLNL 372 (434)
Q Consensus 343 ~~~~~~~~~~~~~~l~~dg~FlL~mi~~N~ 372 (434)
+.+++++.+.+++. +.+|.||+|--..+.
T Consensus 14 g~isR~eAe~lL~~-~~~G~FLvR~S~~~~ 42 (106)
T d2cs0a1 14 GAISREDAENLLES-QPLGSFLIRVSHSHV 42 (106)
T ss_dssp SSCCHHHHHHHHHT-SCTTCEEEEECSSSS
T ss_pred CCCCHHHHHHHHcC-CCCCcEEEEecCCCC
Confidence 45788888888875 579999999754443
Done!