Query psy4818
Match_columns 734
No_of_seqs 437 out of 3817
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 18:30:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4818.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4818hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 1E-106 2E-111 839.3 69.0 664 20-727 3-681 (682)
2 KOG2237|consensus 100.0 1E-101 3E-106 793.1 52.7 703 20-730 3-711 (712)
3 PRK10115 protease 2; Provision 100.0 6.5E-98 1E-102 838.7 81.2 661 23-728 2-679 (686)
4 COG1505 Serine proteases of th 100.0 2.7E-88 5.8E-93 692.5 51.0 634 41-726 2-648 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 3.1E-52 6.8E-57 451.9 47.4 406 23-446 1-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 6.9E-48 1.5E-52 432.3 54.9 570 93-727 15-619 (620)
7 KOG2281|consensus 100.0 2E-37 4.4E-42 317.3 36.0 333 365-723 517-866 (867)
8 KOG2100|consensus 100.0 2E-33 4.3E-38 316.8 50.6 551 142-729 148-752 (755)
9 PF00326 Peptidase_S9: Prolyl 100.0 1E-33 2.3E-38 277.7 15.7 209 504-727 1-212 (213)
10 TIGR02800 propeller_TolB tol-p 99.9 6.4E-21 1.4E-25 207.8 28.1 298 63-404 118-416 (417)
11 PRK01029 tolB translocation pr 99.9 7.3E-20 1.6E-24 196.9 30.2 288 80-406 126-424 (428)
12 PRK04792 tolB translocation pr 99.9 1.3E-19 2.8E-24 196.6 29.9 262 101-406 183-446 (448)
13 PRK13604 luxD acyl transferase 99.9 1.8E-20 4E-25 186.2 20.9 217 463-706 13-248 (307)
14 PLN02442 S-formylglutathione h 99.9 2.2E-20 4.7E-25 190.3 21.0 248 458-726 17-282 (283)
15 PRK10566 esterase; Provisional 99.9 1.5E-20 3.3E-25 189.5 19.5 228 471-725 11-249 (249)
16 PRK03629 tolB translocation pr 99.9 4.5E-19 9.8E-24 191.7 32.1 263 100-406 163-427 (429)
17 PRK05137 tolB translocation pr 99.9 3.3E-19 7.2E-24 194.0 30.1 261 100-406 165-432 (435)
18 TIGR02821 fghA_ester_D S-formy 99.9 9.4E-20 2E-24 185.4 22.9 246 458-725 12-275 (275)
19 PRK00178 tolB translocation pr 99.8 8.2E-19 1.8E-23 191.4 30.3 264 99-406 161-427 (430)
20 PRK02889 tolB translocation pr 99.8 7.5E-19 1.6E-23 190.3 29.3 260 101-406 164-424 (427)
21 PRK04043 tolB translocation pr 99.8 9.4E-19 2E-23 186.8 28.7 253 102-400 157-415 (419)
22 PRK04922 tolB translocation pr 99.8 1.5E-18 3.3E-23 188.6 30.4 264 99-406 166-432 (433)
23 PRK10162 acetyl esterase; Prov 99.8 6.8E-19 1.5E-23 182.5 22.4 238 457-726 55-317 (318)
24 PLN02298 hydrolase, alpha/beta 99.8 1.2E-18 2.7E-23 183.2 24.0 257 453-731 26-324 (330)
25 PRK05077 frsA fermentation/res 99.8 7E-19 1.5E-23 188.0 21.9 238 456-725 165-413 (414)
26 PRK04043 tolB translocation pr 99.8 5.9E-18 1.3E-22 180.7 24.7 206 93-339 192-403 (419)
27 PF01738 DLH: Dienelactone hyd 99.8 3.6E-19 7.9E-24 175.1 12.0 205 472-725 1-218 (218)
28 PF05448 AXE1: Acetyl xylan es 99.8 1.5E-18 3.3E-23 177.3 16.5 244 454-724 51-320 (320)
29 TIGR01840 esterase_phb esteras 99.8 2.4E-18 5.3E-23 168.1 17.2 195 474-681 1-198 (212)
30 PRK05137 tolB translocation pr 99.8 2.5E-17 5.5E-22 179.3 27.1 242 153-429 165-411 (435)
31 PRK01029 tolB translocation pr 99.8 4.3E-17 9.3E-22 175.5 27.7 252 146-429 141-402 (428)
32 PRK01742 tolB translocation pr 99.8 8E-17 1.7E-21 174.7 29.7 277 80-406 148-425 (429)
33 COG0412 Dienelactone hydrolase 99.8 1.8E-17 4E-22 162.4 21.6 216 460-726 3-235 (236)
34 COG3458 Acetyl esterase (deace 99.8 1.3E-17 2.7E-22 156.3 16.7 246 452-725 49-318 (321)
35 PLN02385 hydrolase; alpha/beta 99.8 2.5E-17 5.4E-22 174.3 20.5 249 456-726 58-347 (349)
36 PRK03629 tolB translocation pr 99.8 3.3E-16 7.2E-21 169.4 27.5 240 154-429 164-405 (429)
37 COG1647 Esterase/lipase [Gener 99.8 6.1E-18 1.3E-22 154.2 11.5 210 486-722 13-242 (243)
38 COG0657 Aes Esterase/lipase [L 99.7 3E-17 6.5E-22 170.8 17.7 228 465-723 57-309 (312)
39 PRK05371 x-prolyl-dipeptidyl a 99.7 2.2E-16 4.8E-21 179.6 25.7 259 450-727 161-522 (767)
40 PHA02857 monoglyceride lipase; 99.7 1.1E-16 2.3E-21 164.2 21.1 231 465-724 6-273 (276)
41 PRK04792 tolB translocation pr 99.7 3.2E-16 7E-21 170.1 23.7 207 93-339 222-428 (448)
42 PRK02889 tolB translocation pr 99.7 1.2E-15 2.7E-20 165.2 27.6 238 154-429 164-402 (427)
43 PRK04922 tolB translocation pr 99.7 9.4E-16 2E-20 166.7 26.6 241 153-429 167-410 (433)
44 KOG1552|consensus 99.7 1.3E-16 2.9E-21 150.5 16.6 218 458-725 34-253 (258)
45 PRK00178 tolB translocation pr 99.7 1.4E-15 3E-20 166.0 26.7 249 144-429 154-405 (430)
46 PRK10749 lysophospholipase L2; 99.7 3.9E-16 8.5E-21 163.6 20.8 246 459-724 30-329 (330)
47 PF00930 DPPIV_N: Dipeptidyl p 99.7 4.8E-15 1.1E-19 156.4 27.9 303 97-422 1-353 (353)
48 PRK11460 putative hydrolase; P 99.7 9E-16 1.9E-20 151.5 19.0 186 485-725 13-209 (232)
49 KOG1455|consensus 99.7 6.6E-16 1.4E-20 148.7 16.9 245 458-724 26-312 (313)
50 KOG1515|consensus 99.7 2.3E-15 5E-20 152.7 20.6 242 458-724 62-335 (336)
51 PLN02652 hydrolase; alpha/beta 99.7 1.9E-15 4.2E-20 160.2 20.6 245 456-727 107-390 (395)
52 PF07859 Abhydrolase_3: alpha/ 99.7 1.7E-16 3.7E-21 155.5 11.3 187 491-703 1-209 (211)
53 COG0823 TolB Periplasmic compo 99.7 9.3E-15 2E-19 154.8 23.3 251 109-402 167-419 (425)
54 PRK01742 tolB translocation pr 99.6 6.1E-14 1.3E-18 152.3 25.9 234 153-429 168-403 (429)
55 PF10503 Esterase_phd: Esteras 99.6 1.3E-14 2.9E-19 138.7 16.5 195 473-680 2-198 (220)
56 TIGR02800 propeller_TolB tol-p 99.6 1.2E-13 2.6E-18 150.5 26.0 244 150-429 152-396 (417)
57 COG2267 PldB Lysophospholipase 99.6 2.7E-14 5.9E-19 145.5 19.2 242 459-726 9-296 (298)
58 TIGR00976 /NonD putative hydro 99.6 1.7E-14 3.6E-19 161.4 19.2 135 465-608 2-137 (550)
59 COG0823 TolB Periplasmic compo 99.6 1.4E-14 3E-19 153.5 17.2 208 93-338 197-404 (425)
60 KOG4391|consensus 99.6 1.1E-14 2.3E-19 131.7 13.6 234 453-726 48-284 (300)
61 PF02230 Abhydrolase_2: Phosph 99.6 3.6E-14 7.9E-19 139.0 16.9 191 485-725 11-216 (216)
62 PF02129 Peptidase_S15: X-Pro 99.6 1.3E-14 2.9E-19 147.5 11.6 214 468-702 1-271 (272)
63 PRK10985 putative hydrolase; P 99.6 1.2E-13 2.6E-18 144.4 18.9 242 459-726 31-322 (324)
64 PRK00870 haloalkane dehalogena 99.6 2E-13 4.3E-18 141.7 20.4 236 458-724 20-301 (302)
65 PLN02511 hydrolase 99.5 2.3E-13 5E-18 145.2 19.5 247 458-726 70-367 (388)
66 PF06500 DUF1100: Alpha/beta h 99.5 1.5E-13 3.3E-18 141.0 16.9 238 455-725 161-410 (411)
67 TIGR03611 RutD pyrimidine util 99.5 9.3E-14 2E-18 140.4 15.4 206 486-722 11-256 (257)
68 TIGR01607 PST-A Plasmodium sub 99.5 1.6E-13 3.6E-18 143.3 16.6 234 464-722 2-331 (332)
69 TIGR03343 biphenyl_bphD 2-hydr 99.5 9.4E-14 2E-18 142.8 14.4 208 487-722 29-281 (282)
70 COG3509 LpqC Poly(3-hydroxybut 99.5 4E-13 8.8E-18 129.0 16.5 230 468-725 43-308 (312)
71 PF00930 DPPIV_N: Dipeptidyl p 99.5 2.4E-12 5.3E-17 135.9 24.0 253 150-429 1-314 (353)
72 TIGR03100 hydr1_PEP hydrolase, 99.5 1.2E-12 2.5E-17 133.3 19.7 235 460-722 3-273 (274)
73 PRK11071 esterase YqiA; Provis 99.5 4E-13 8.6E-18 128.0 15.0 184 489-722 2-189 (190)
74 COG2945 Predicted hydrolase of 99.5 4.2E-13 9.1E-18 120.1 13.8 199 460-722 5-205 (210)
75 PLN00021 chlorophyllase 99.5 4E-12 8.7E-17 130.2 22.6 225 452-728 17-287 (313)
76 COG4099 Predicted peptidase [G 99.5 1.4E-13 3.1E-18 130.6 10.8 174 467-697 169-354 (387)
77 PLN02872 triacylglycerol lipas 99.5 4.7E-13 1E-17 141.3 15.7 147 453-603 38-197 (395)
78 PF12695 Abhydrolase_5: Alpha/ 99.5 5.3E-13 1.1E-17 122.1 13.4 145 490-702 1-145 (145)
79 TIGR02427 protocat_pcaD 3-oxoa 99.5 4.5E-13 9.7E-18 134.6 13.8 203 487-721 12-250 (251)
80 COG0400 Predicted esterase [Ge 99.5 2.1E-12 4.5E-17 122.4 16.9 187 485-725 15-206 (207)
81 TIGR03056 bchO_mg_che_rel puta 99.5 2.7E-12 5.9E-17 131.6 19.0 203 488-721 28-277 (278)
82 TIGR01249 pro_imino_pep_1 prol 99.4 2.8E-12 6.1E-17 133.2 18.3 122 463-602 8-129 (306)
83 TIGR02240 PHA_depoly_arom poly 99.4 3.3E-12 7.1E-17 130.8 18.2 221 468-726 10-268 (276)
84 TIGR01250 pro_imino_pep_2 prol 99.4 2.5E-12 5.5E-17 132.2 17.3 108 487-603 24-131 (288)
85 PF12715 Abhydrolase_7: Abhydr 99.4 4.7E-13 1E-17 134.7 10.8 143 454-600 83-257 (390)
86 PRK10673 acyl-CoA esterase; Pr 99.4 2.8E-12 6E-17 129.8 16.6 206 485-723 13-254 (255)
87 COG0429 Predicted hydrolase of 99.4 9.4E-12 2E-16 122.0 19.3 237 463-726 53-342 (345)
88 PRK03592 haloalkane dehalogena 99.4 8.6E-12 1.9E-16 129.1 20.0 207 487-724 26-289 (295)
89 PLN02965 Probable pheophorbida 99.4 8E-12 1.7E-16 126.2 19.2 204 490-722 5-251 (255)
90 PLN02824 hydrolase, alpha/beta 99.4 2.3E-12 4.9E-17 133.3 15.4 211 488-723 29-293 (294)
91 TIGR03101 hydr2_PEP hydrolase, 99.4 4.3E-11 9.4E-16 119.1 22.2 214 461-699 2-243 (266)
92 PRK03204 haloalkane dehalogena 99.4 6.6E-12 1.4E-16 128.9 15.8 103 487-602 33-135 (286)
93 KOG0293|consensus 99.4 4.2E-11 9.2E-16 118.2 20.2 241 140-429 268-512 (519)
94 TIGR01738 bioH putative pimelo 99.4 5E-12 1.1E-16 126.5 14.2 196 488-720 4-244 (245)
95 PLN03087 BODYGUARD 1 domain co 99.4 1.3E-11 2.8E-16 132.7 17.5 122 467-602 183-308 (481)
96 PF08840 BAAT_C: BAAT / Acyl-C 99.4 3.2E-12 6.9E-17 123.9 11.5 163 549-727 3-213 (213)
97 KOG4178|consensus 99.4 6E-11 1.3E-15 116.8 20.2 105 485-600 41-145 (322)
98 PLN02894 hydrolase, alpha/beta 99.4 3.6E-11 7.8E-16 128.9 20.0 107 486-602 103-210 (402)
99 PLN02679 hydrolase, alpha/beta 99.4 2.3E-11 5.1E-16 128.9 17.7 209 488-723 88-356 (360)
100 TIGR03695 menH_SHCHC 2-succiny 99.3 1.5E-11 3.3E-16 123.3 15.2 103 489-603 2-105 (251)
101 KOG0271|consensus 99.3 7.9E-10 1.7E-14 108.4 25.9 254 139-429 113-438 (480)
102 PF03583 LIP: Secretory lipase 99.3 2.1E-11 4.6E-16 123.8 16.1 198 511-732 20-289 (290)
103 PRK06489 hypothetical protein; 99.3 2.6E-11 5.6E-16 128.9 17.0 110 488-602 69-188 (360)
104 KOG4667|consensus 99.3 2.9E-11 6.2E-16 109.9 14.3 197 486-708 31-245 (269)
105 TIGR01836 PHA_synth_III_C poly 99.3 2.3E-11 5E-16 128.7 15.9 125 472-606 48-174 (350)
106 PRK14875 acetoin dehydrogenase 99.3 1.7E-11 3.6E-16 131.5 15.1 103 486-602 129-231 (371)
107 TIGR01392 homoserO_Ac_trn homo 99.3 3.8E-11 8.2E-16 127.2 17.0 130 468-602 14-161 (351)
108 PLN02578 hydrolase 99.3 3.4E-11 7.4E-16 127.6 16.2 95 489-601 87-185 (354)
109 PRK10439 enterobactin/ferric e 99.3 2.4E-10 5.3E-15 121.5 22.3 204 459-703 180-392 (411)
110 PF12697 Abhydrolase_6: Alpha/ 99.3 2.4E-12 5.3E-17 127.0 6.6 103 491-605 1-103 (228)
111 PRK07581 hypothetical protein; 99.3 2.3E-11 5E-16 128.4 14.0 113 487-601 40-157 (339)
112 PRK10349 carboxylesterase BioH 99.3 4E-11 8.6E-16 121.3 14.8 196 488-720 13-252 (256)
113 PRK00175 metX homoserine O-ace 99.3 4.6E-11 9.9E-16 127.6 15.1 221 487-724 47-374 (379)
114 KOG0279|consensus 99.3 9.7E-10 2.1E-14 103.6 21.8 232 139-417 61-304 (315)
115 KOG1838|consensus 99.3 3.1E-10 6.6E-15 115.9 20.1 242 458-725 92-389 (409)
116 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 1.9E-08 4.2E-13 104.0 32.4 240 144-429 33-278 (300)
117 KOG0318|consensus 99.2 2E-08 4.4E-13 102.6 29.6 258 140-429 58-349 (603)
118 PLN02211 methyl indole-3-aceta 99.2 5.2E-10 1.1E-14 113.7 17.5 107 485-602 15-121 (273)
119 PF00756 Esterase: Putative es 99.2 8.6E-12 1.9E-16 125.7 3.8 137 469-606 5-153 (251)
120 COG4946 Uncharacterized protei 99.2 2.4E-08 5.2E-13 100.7 27.8 101 94-207 44-147 (668)
121 KOG3101|consensus 99.2 5.5E-11 1.2E-15 107.4 8.2 211 470-703 26-262 (283)
122 PF14583 Pectate_lyase22: Olig 99.2 1.2E-08 2.6E-13 103.8 25.9 304 94-429 41-382 (386)
123 PRK08775 homoserine O-acetyltr 99.2 3.6E-10 7.8E-15 119.3 15.7 182 514-724 95-339 (343)
124 PRK11126 2-succinyl-6-hydroxy- 99.2 4.8E-10 1E-14 112.3 15.4 99 488-602 2-101 (242)
125 KOG3043|consensus 99.2 8.4E-10 1.8E-14 101.7 14.9 198 472-726 28-242 (242)
126 PLN03084 alpha/beta hydrolase 99.1 2E-09 4.4E-14 113.6 19.2 107 487-603 126-232 (383)
127 KOG0293|consensus 99.1 4.6E-09 1E-13 104.0 19.9 240 142-429 225-469 (519)
128 KOG4627|consensus 99.1 8.6E-11 1.9E-15 105.8 7.2 223 458-725 44-268 (270)
129 KOG0271|consensus 99.1 1.1E-08 2.4E-13 100.4 21.4 123 273-412 344-467 (480)
130 TIGR03866 PQQ_ABC_repeats PQQ- 99.1 5.1E-08 1.1E-12 100.9 26.5 212 145-395 76-290 (300)
131 KOG0266|consensus 99.1 2E-08 4.3E-13 109.7 23.4 232 139-413 201-439 (456)
132 PF14583 Pectate_lyase22: Olig 99.1 1.2E-07 2.6E-12 96.6 27.1 231 144-410 38-296 (386)
133 PF12740 Chlorophyllase2: Chlo 99.1 6.9E-09 1.5E-13 100.7 17.4 116 472-604 4-132 (259)
134 KOG1454|consensus 99.1 2E-09 4.3E-14 111.1 14.4 213 486-725 56-325 (326)
135 cd00312 Esterase_lipase Estera 99.1 4.2E-10 9.2E-15 125.2 10.1 131 471-605 78-215 (493)
136 COG2272 PnbA Carboxylesterase 99.1 3.7E-10 8E-15 117.0 8.7 218 471-704 79-312 (491)
137 PLN02980 2-oxoglutarate decarb 99.0 8.2E-09 1.8E-13 128.3 20.1 225 487-725 1370-1640(1655)
138 COG4946 Uncharacterized protei 99.0 2.8E-08 6E-13 100.3 19.8 232 153-429 50-294 (668)
139 COG2936 Predicted acyl esteras 99.0 1.8E-09 3.9E-14 115.2 11.8 143 456-607 16-163 (563)
140 KOG4409|consensus 99.0 8.3E-09 1.8E-13 102.1 15.5 128 458-602 66-194 (365)
141 COG0627 Predicted esterase [Ge 99.0 4.8E-09 1E-13 106.3 14.3 228 484-728 50-315 (316)
142 cd00200 WD40 WD40 domain, foun 99.0 4.4E-07 9.6E-12 92.2 28.2 237 141-429 9-248 (289)
143 PF05728 UPF0227: Uncharacteri 99.0 1.5E-08 3.1E-13 95.1 15.3 180 490-721 1-186 (187)
144 KOG0272|consensus 99.0 2.7E-08 5.9E-13 99.1 17.7 232 139-419 215-451 (459)
145 cd00200 WD40 WD40 domain, foun 99.0 6.3E-07 1.4E-11 91.1 28.8 224 143-413 53-278 (289)
146 PRK06765 homoserine O-acetyltr 99.0 1.1E-08 2.5E-13 108.2 15.4 114 486-601 54-194 (389)
147 KOG0266|consensus 98.9 3.3E-07 7.1E-12 100.2 26.5 242 141-429 159-408 (456)
148 PRK05855 short chain dehydroge 98.9 1E-08 2.3E-13 117.1 15.3 105 466-588 9-114 (582)
149 PF02897 Peptidase_S9_N: Proly 98.9 1.7E-06 3.6E-11 94.2 30.7 260 95-388 130-408 (414)
150 KOG0272|consensus 98.9 2.7E-08 5.9E-13 99.1 14.9 231 141-418 175-409 (459)
151 KOG0279|consensus 98.9 3.3E-06 7.1E-11 80.3 27.3 239 140-429 14-261 (315)
152 PF03403 PAF-AH_p_II: Platelet 98.9 1.9E-08 4.1E-13 105.9 13.8 114 485-602 97-261 (379)
153 TIGR01838 PHA_synth_I poly(R)- 98.9 4.1E-08 8.8E-13 107.0 16.1 124 472-605 174-304 (532)
154 KOG0315|consensus 98.9 2.7E-06 5.9E-11 79.4 24.9 229 128-395 63-299 (311)
155 PTZ00421 coronin; Provisional 98.9 8.1E-07 1.7E-11 97.0 25.4 211 140-389 74-295 (493)
156 KOG0286|consensus 98.8 1.6E-06 3.5E-11 82.7 23.7 244 139-429 53-302 (343)
157 KOG0305|consensus 98.8 1.1E-06 2.4E-11 92.8 25.0 250 117-416 199-451 (484)
158 TIGR02658 TTQ_MADH_Hv methylam 98.8 4.4E-06 9.5E-11 86.1 28.8 240 148-429 52-329 (352)
159 KOG2624|consensus 98.8 1.2E-07 2.6E-12 98.8 16.5 147 452-605 41-201 (403)
160 PF08538 DUF1749: Protein of u 98.8 6.3E-08 1.4E-12 95.9 13.5 217 487-721 32-302 (303)
161 PF08662 eIF2A: Eukaryotic tra 98.8 4E-07 8.7E-12 86.9 18.2 146 146-322 10-163 (194)
162 KOG0291|consensus 98.8 2.9E-06 6.3E-11 90.9 25.8 237 143-429 309-549 (893)
163 PRK11028 6-phosphogluconolacto 98.8 1.5E-05 3.2E-10 83.9 31.8 251 144-429 37-303 (330)
164 PF08662 eIF2A: Eukaryotic tra 98.8 7.6E-07 1.6E-11 85.0 19.3 160 94-284 11-180 (194)
165 KOG2984|consensus 98.8 6E-09 1.3E-13 93.8 4.5 210 490-723 44-275 (277)
166 PTZ00420 coronin; Provisional 98.8 2E-05 4.4E-10 86.7 32.1 208 140-387 73-296 (568)
167 PRK07868 acyl-CoA synthetase; 98.7 2.8E-07 6E-12 110.8 18.6 233 472-732 49-369 (994)
168 PF00561 Abhydrolase_1: alpha/ 98.7 1.6E-08 3.5E-13 100.2 6.2 78 519-602 1-78 (230)
169 PF00135 COesterase: Carboxyle 98.7 2.5E-08 5.5E-13 112.6 7.9 127 471-602 108-244 (535)
170 KOG0275|consensus 98.7 5.1E-07 1.1E-11 86.9 15.1 244 144-442 216-474 (508)
171 KOG1407|consensus 98.7 5.3E-06 1.1E-10 78.1 21.0 232 140-419 63-295 (313)
172 KOG2112|consensus 98.7 8.2E-07 1.8E-11 81.9 15.5 187 489-723 4-203 (206)
173 PTZ00420 coronin; Provisional 98.7 3.7E-05 8E-10 84.7 31.3 241 148-429 33-292 (568)
174 KOG0318|consensus 98.7 5.8E-06 1.3E-10 85.1 22.9 227 143-417 192-426 (603)
175 PF02239 Cytochrom_D1: Cytochr 98.7 9.8E-06 2.1E-10 85.5 25.7 249 145-429 40-346 (369)
176 PTZ00421 coronin; Provisional 98.7 2.6E-05 5.5E-10 85.4 29.6 240 148-429 35-289 (493)
177 KOG0973|consensus 98.7 8.6E-07 1.9E-11 98.9 18.1 242 140-429 68-354 (942)
178 PF06821 Ser_hydrolase: Serine 98.7 5E-07 1.1E-11 83.9 13.8 157 491-707 1-158 (171)
179 COG4757 Predicted alpha/beta h 98.7 3.3E-07 7.1E-12 85.0 12.0 236 462-721 8-280 (281)
180 PRK13616 lipoprotein LpqB; Pro 98.6 1.8E-06 4E-11 95.9 20.3 172 143-339 351-530 (591)
181 cd00707 Pancreat_lipase_like P 98.6 1.4E-07 3E-12 95.5 10.3 114 485-603 33-147 (275)
182 KOG2096|consensus 98.6 3.6E-06 7.8E-11 81.3 18.7 266 131-412 77-389 (420)
183 PRK10115 protease 2; Provision 98.6 3.8E-05 8.2E-10 87.9 30.5 260 95-393 133-402 (686)
184 COG2706 3-carboxymuconate cycl 98.6 7.4E-05 1.6E-09 74.3 28.1 259 98-388 49-327 (346)
185 KOG1446|consensus 98.6 0.0003 6.6E-09 68.5 31.4 245 142-437 15-264 (311)
186 PF10282 Lactonase: Lactonase, 98.6 1.8E-05 3.8E-10 83.5 24.9 215 145-388 90-328 (345)
187 COG3571 Predicted hydrolase of 98.6 5.8E-06 1.3E-10 72.0 17.0 169 486-704 11-183 (213)
188 PF08450 SGL: SMP-30/Gluconola 98.6 6E-05 1.3E-09 75.5 27.3 229 145-416 3-245 (246)
189 PF07224 Chlorophyllase: Chlor 98.6 3.9E-07 8.4E-12 86.3 10.2 136 452-604 9-158 (307)
190 COG2706 3-carboxymuconate cycl 98.6 0.00029 6.4E-09 70.1 30.2 270 144-445 42-331 (346)
191 PF10340 DUF2424: Protein of u 98.6 9.1E-07 2E-11 90.6 13.4 206 474-703 108-350 (374)
192 PLN00181 protein SPA1-RELATED; 98.5 4.1E-05 8.8E-10 90.4 29.1 236 142-429 484-737 (793)
193 KOG0315|consensus 98.5 4.8E-05 1E-09 71.3 23.0 217 168-429 20-244 (311)
194 COG2819 Predicted hydrolase of 98.5 1.9E-06 4.1E-11 83.3 14.4 139 462-603 12-172 (264)
195 KOG0263|consensus 98.5 6.6E-06 1.4E-10 88.9 20.0 193 190-429 454-648 (707)
196 KOG0286|consensus 98.5 6.7E-05 1.5E-09 72.0 24.4 199 190-429 58-258 (343)
197 COG2382 Fes Enterochelin ester 98.5 1.4E-06 3E-11 85.3 13.5 206 460-704 70-282 (299)
198 KOG0296|consensus 98.5 0.00011 2.3E-09 72.8 26.1 243 139-419 104-390 (399)
199 PF10282 Lactonase: Lactonase, 98.5 0.00012 2.6E-09 77.2 29.0 268 144-445 39-332 (345)
200 PRK13616 lipoprotein LpqB; Pro 98.5 1.2E-05 2.6E-10 89.5 22.0 154 97-284 358-528 (591)
201 KOG0291|consensus 98.5 0.00012 2.5E-09 79.0 27.8 238 144-429 268-507 (893)
202 KOG2314|consensus 98.5 4.6E-05 1E-09 79.2 23.9 294 92-418 214-559 (698)
203 COG4188 Predicted dienelactone 98.5 5.2E-07 1.1E-11 91.0 9.8 130 459-591 38-182 (365)
204 KOG2055|consensus 98.5 8E-06 1.7E-10 82.8 17.2 204 143-380 305-510 (514)
205 KOG2055|consensus 98.5 8.8E-06 1.9E-10 82.5 17.3 232 142-415 258-501 (514)
206 KOG0772|consensus 98.4 1.7E-05 3.6E-10 81.6 18.9 240 140-417 213-478 (641)
207 TIGR01839 PHA_synth_II poly(R) 98.4 1.1E-05 2.3E-10 87.2 17.8 84 510-606 239-331 (560)
208 PF02273 Acyl_transf_2: Acyl t 98.4 2.6E-06 5.6E-11 79.9 11.3 213 465-707 8-242 (294)
209 KOG3847|consensus 98.4 1.1E-05 2.4E-10 78.3 15.9 112 485-600 115-272 (399)
210 TIGR02658 TTQ_MADH_Hv methylam 98.4 9.2E-05 2E-09 76.4 23.8 205 146-392 109-338 (352)
211 KOG0772|consensus 98.4 1.4E-05 3.1E-10 82.0 17.4 208 97-337 223-446 (641)
212 KOG1553|consensus 98.4 1.4E-06 3.1E-11 85.1 9.7 136 459-608 214-350 (517)
213 KOG0263|consensus 98.4 9.1E-06 2E-10 87.8 16.7 195 142-384 452-649 (707)
214 KOG2564|consensus 98.4 1.2E-06 2.6E-11 83.6 8.8 118 458-588 49-166 (343)
215 KOG0273|consensus 98.4 7.7E-05 1.7E-09 76.1 21.9 254 142-429 236-522 (524)
216 TIGR03230 lipo_lipase lipoprot 98.4 1.9E-06 4.2E-11 91.3 11.2 114 485-602 38-153 (442)
217 COG3208 GrsT Predicted thioest 98.4 6.6E-06 1.4E-10 78.2 13.6 204 486-726 6-234 (244)
218 PRK11028 6-phosphogluconolacto 98.4 0.00019 4.2E-09 75.4 26.3 116 144-284 82-206 (330)
219 KOG1446|consensus 98.4 9E-05 2E-09 72.0 20.6 225 142-408 57-287 (311)
220 PF09752 DUF2048: Uncharacteri 98.3 1.3E-05 2.7E-10 81.0 14.9 120 472-599 77-206 (348)
221 KOG2139|consensus 98.3 0.00013 2.7E-09 72.2 21.2 117 140-284 194-312 (445)
222 KOG0310|consensus 98.3 0.00013 2.9E-09 74.8 21.7 229 143-418 70-301 (487)
223 KOG0265|consensus 98.3 0.00068 1.5E-08 65.5 25.0 124 133-284 39-164 (338)
224 PF06342 DUF1057: Alpha/beta h 98.3 2.2E-05 4.7E-10 76.2 15.1 130 459-601 6-135 (297)
225 KOG0275|consensus 98.3 1.3E-05 2.9E-10 77.3 13.5 228 144-416 266-498 (508)
226 PF11144 DUF2920: Protein of u 98.3 0.0001 2.2E-09 75.9 20.6 165 549-725 163-368 (403)
227 KOG0283|consensus 98.3 0.00012 2.7E-09 80.0 22.1 174 226-429 391-575 (712)
228 PRK04940 hypothetical protein; 98.3 1.3E-05 2.7E-10 73.7 12.5 119 568-722 60-178 (180)
229 PF02239 Cytochrom_D1: Cytochr 98.3 0.00018 3.8E-09 76.1 22.9 221 144-393 80-356 (369)
230 KOG2382|consensus 98.3 1.3E-05 2.8E-10 79.8 13.3 214 486-724 50-313 (315)
231 COG2021 MET2 Homoserine acetyl 98.3 8.5E-06 1.8E-10 82.2 11.8 114 486-601 49-180 (368)
232 KOG0296|consensus 98.2 0.00019 4.1E-09 71.1 20.2 158 140-339 63-223 (399)
233 KOG1407|consensus 98.2 0.00016 3.4E-09 68.4 18.0 219 191-471 24-245 (313)
234 KOG0973|consensus 98.1 6.4E-05 1.4E-09 84.3 16.8 123 141-284 129-254 (942)
235 KOG0305|consensus 98.1 0.0002 4.3E-09 76.1 19.4 248 130-429 168-418 (484)
236 PF11339 DUF3141: Protein of u 98.1 8.9E-05 1.9E-09 77.6 16.3 104 486-605 67-178 (581)
237 COG3545 Predicted esterase of 98.1 0.00016 3.4E-09 65.0 14.9 123 542-704 36-158 (181)
238 PLN00181 protein SPA1-RELATED; 98.1 0.0027 6E-08 75.1 29.9 237 143-429 534-792 (793)
239 KOG0316|consensus 98.1 0.00067 1.5E-08 63.3 19.0 224 142-415 60-289 (307)
240 KOG0645|consensus 98.1 0.0024 5.2E-08 61.0 22.9 116 142-284 15-136 (312)
241 KOG4497|consensus 98.0 7.6E-05 1.7E-09 72.7 12.7 142 146-325 13-156 (447)
242 COG1073 Hydrolases of the alph 98.0 5.5E-05 1.2E-09 78.0 13.1 232 470-725 31-298 (299)
243 KOG0295|consensus 98.0 0.00073 1.6E-08 67.0 19.5 248 139-426 148-404 (406)
244 KOG0295|consensus 98.0 0.00084 1.8E-08 66.6 19.7 240 141-429 108-363 (406)
245 KOG0282|consensus 98.0 4.7E-05 1E-09 77.8 11.5 232 140-415 257-493 (503)
246 KOG1273|consensus 98.0 0.0016 3.4E-08 63.5 20.7 158 144-339 26-186 (405)
247 TIGR03502 lipase_Pla1_cef extr 98.0 4.5E-05 9.7E-10 86.2 11.8 98 486-588 447-575 (792)
248 KOG0643|consensus 98.0 0.00075 1.6E-08 64.2 17.7 125 139-285 50-179 (327)
249 KOG0306|consensus 98.0 0.0012 2.6E-08 71.4 21.1 236 144-429 415-663 (888)
250 PF05677 DUF818: Chlamydia CHL 98.0 5.4E-05 1.2E-09 75.4 10.4 138 458-607 111-259 (365)
251 KOG1516|consensus 97.9 1.5E-05 3.2E-10 90.0 7.5 128 471-602 96-231 (545)
252 KOG0285|consensus 97.9 0.0011 2.5E-08 65.5 18.8 235 142-429 152-388 (460)
253 KOG1274|consensus 97.9 0.00041 8.8E-09 76.7 17.1 178 117-337 78-263 (933)
254 KOG0650|consensus 97.9 0.00072 1.6E-08 71.2 17.9 234 140-429 399-638 (733)
255 PF06433 Me-amine-dh_H: Methyl 97.9 0.037 7.9E-07 56.2 30.6 252 145-437 39-322 (342)
256 KOG2551|consensus 97.9 0.00079 1.7E-08 63.0 16.4 184 487-726 4-222 (230)
257 PF07433 DUF1513: Protein of u 97.9 0.011 2.4E-07 59.1 25.5 257 101-383 18-284 (305)
258 KOG0316|consensus 97.9 0.0052 1.1E-07 57.6 21.4 237 142-429 18-256 (307)
259 PF03959 FSH1: Serine hydrolas 97.9 4.4E-05 9.6E-10 74.2 8.6 168 487-706 3-205 (212)
260 COG3386 Gluconolactonase [Carb 97.9 0.0022 4.7E-08 65.5 21.1 237 145-421 28-280 (307)
261 KOG0273|consensus 97.9 0.0052 1.1E-07 63.2 22.8 234 143-429 180-439 (524)
262 KOG0289|consensus 97.9 0.0036 7.8E-08 63.6 21.4 235 144-429 222-461 (506)
263 KOG1274|consensus 97.8 0.0093 2E-07 66.4 26.1 241 140-429 12-261 (933)
264 KOG4497|consensus 97.8 0.003 6.6E-08 61.9 19.9 93 309-412 325-418 (447)
265 PF10647 Gmad1: Lipoprotein Lp 97.8 0.0028 6.1E-08 63.3 20.0 121 142-283 24-144 (253)
266 KOG2048|consensus 97.8 0.025 5.5E-07 60.9 27.5 159 249-429 382-547 (691)
267 TIGR01849 PHB_depoly_PhaZ poly 97.8 0.00069 1.5E-08 71.3 15.9 85 508-606 120-211 (406)
268 KOG1273|consensus 97.8 0.0027 5.9E-08 61.9 18.2 226 140-406 64-303 (405)
269 PF05577 Peptidase_S28: Serine 97.8 9E-05 1.9E-09 80.9 9.5 127 472-603 14-148 (434)
270 KOG0282|consensus 97.7 0.00066 1.4E-08 69.7 14.4 241 139-429 212-461 (503)
271 PF07433 DUF1513: Protein of u 97.7 0.015 3.4E-07 58.1 23.7 211 191-437 8-249 (305)
272 KOG0265|consensus 97.7 0.0017 3.6E-08 63.0 16.0 193 191-429 51-245 (338)
273 KOG1445|consensus 97.7 0.00064 1.4E-08 71.9 14.0 149 112-284 649-799 (1012)
274 KOG3253|consensus 97.7 0.00062 1.4E-08 72.2 13.9 170 486-704 174-347 (784)
275 PLN02919 haloacid dehalogenase 97.7 0.067 1.4E-06 64.6 33.0 248 145-429 571-887 (1057)
276 KOG0284|consensus 97.7 0.00044 9.5E-09 69.5 12.1 192 190-429 99-293 (464)
277 PF06057 VirJ: Bacterial virul 97.7 0.00034 7.5E-09 64.5 10.6 98 490-601 4-105 (192)
278 KOG0640|consensus 97.7 0.0011 2.4E-08 64.3 14.3 209 144-394 115-345 (430)
279 KOG0284|consensus 97.7 0.0011 2.3E-08 66.8 14.5 228 140-414 137-367 (464)
280 KOG2315|consensus 97.7 0.0063 1.4E-07 64.1 20.4 234 146-418 130-376 (566)
281 KOG0645|consensus 97.7 0.0092 2E-07 57.2 19.5 188 190-412 17-211 (312)
282 PF06433 Me-amine-dh_H: Methyl 97.7 0.0033 7.1E-08 63.6 17.7 213 145-393 98-329 (342)
283 KOG0643|consensus 97.7 0.013 2.8E-07 56.1 20.3 230 142-413 11-248 (327)
284 PLN02919 haloacid dehalogenase 97.6 0.033 7.2E-07 67.2 29.4 211 144-388 626-892 (1057)
285 KOG0294|consensus 97.6 0.012 2.6E-07 57.6 20.4 234 141-429 43-280 (362)
286 PF08450 SGL: SMP-30/Gluconola 97.6 0.0058 1.3E-07 61.1 19.7 171 121-322 66-245 (246)
287 KOG0289|consensus 97.6 0.0091 2E-07 60.8 20.2 184 143-370 305-494 (506)
288 COG0596 MhpC Predicted hydrola 97.6 0.00019 4.2E-09 71.8 8.9 102 488-602 21-122 (282)
289 COG5354 Uncharacterized protei 97.6 0.0098 2.1E-07 61.9 20.7 230 146-418 136-381 (561)
290 KOG0278|consensus 97.6 0.0019 4.2E-08 60.8 14.2 194 142-382 101-297 (334)
291 KOG2048|consensus 97.6 0.06 1.3E-06 58.2 27.0 236 144-429 28-274 (691)
292 KOG0307|consensus 97.6 0.00049 1.1E-08 78.0 12.0 251 145-429 10-283 (1049)
293 PF10230 DUF2305: Uncharacteri 97.6 0.0025 5.5E-08 64.1 16.2 111 488-603 2-122 (266)
294 PF10142 PhoPQ_related: PhoPQ- 97.6 0.0047 1E-07 64.1 18.3 153 559-732 163-328 (367)
295 KOG0771|consensus 97.6 0.0029 6.3E-08 64.2 16.0 191 145-370 148-342 (398)
296 KOG1009|consensus 97.6 0.0095 2.1E-07 60.2 19.1 134 109-269 32-185 (434)
297 COG3150 Predicted esterase [Ge 97.6 0.0012 2.5E-08 58.7 11.2 140 550-722 43-187 (191)
298 KOG2919|consensus 97.5 0.005 1.1E-07 60.3 16.4 200 169-407 134-351 (406)
299 KOG0292|consensus 97.5 0.026 5.5E-07 62.8 22.9 217 141-392 51-288 (1202)
300 KOG1063|consensus 97.5 0.001 2.3E-08 71.3 12.0 125 140-284 524-649 (764)
301 PRK02888 nitrous-oxide reducta 97.5 0.013 2.8E-07 64.2 20.6 154 147-337 198-352 (635)
302 PF12146 Hydrolase_4: Putative 97.5 0.00039 8.5E-09 55.2 6.8 77 469-559 1-77 (79)
303 TIGR02171 Fb_sc_TIGR02171 Fibr 97.5 0.0055 1.2E-07 69.3 18.1 115 154-286 319-443 (912)
304 KOG4840|consensus 97.5 0.0051 1.1E-07 57.2 14.4 107 489-606 37-147 (299)
305 KOG0639|consensus 97.4 0.0055 1.2E-07 63.4 16.1 228 144-426 468-702 (705)
306 KOG0283|consensus 97.4 0.0039 8.4E-08 68.6 16.0 197 143-383 371-575 (712)
307 KOG2314|consensus 97.4 0.027 5.8E-07 59.3 21.1 267 141-429 210-524 (698)
308 KOG0319|consensus 97.4 0.022 4.7E-07 62.0 21.0 204 141-389 62-273 (775)
309 COG4947 Uncharacterized protei 97.4 0.00024 5.1E-09 62.9 5.2 119 553-702 88-215 (227)
310 KOG0299|consensus 97.4 0.029 6.4E-07 57.7 20.7 239 142-425 203-454 (479)
311 KOG0278|consensus 97.4 0.003 6.6E-08 59.6 12.3 217 166-429 79-296 (334)
312 KOG1524|consensus 97.4 0.019 4.1E-07 60.1 19.1 114 141-284 104-217 (737)
313 KOG0641|consensus 97.4 0.035 7.5E-07 51.6 18.7 71 251-337 233-304 (350)
314 KOG2106|consensus 97.4 0.038 8.2E-07 57.6 20.8 111 144-282 410-520 (626)
315 COG1770 PtrB Protease II [Amin 97.3 0.19 4.1E-06 55.1 26.9 255 97-388 137-400 (682)
316 PTZ00472 serine carboxypeptida 97.3 0.00096 2.1E-08 72.7 10.0 132 469-606 60-219 (462)
317 KOG1445|consensus 97.3 0.0081 1.8E-07 63.9 16.0 196 150-383 588-797 (1012)
318 KOG2139|consensus 97.3 0.05 1.1E-06 54.4 20.3 198 142-383 99-310 (445)
319 KOG1036|consensus 97.3 0.18 3.9E-06 49.6 23.7 75 142-238 14-88 (323)
320 KOG4389|consensus 97.3 0.00033 7.3E-09 72.5 5.6 127 472-603 121-255 (601)
321 COG3243 PhaC Poly(3-hydroxyalk 97.3 0.0016 3.5E-08 67.0 10.1 90 509-606 130-220 (445)
322 COG1506 DAP2 Dipeptidyl aminop 97.3 0.15 3.3E-06 58.2 27.1 252 92-383 63-343 (620)
323 COG5354 Uncharacterized protei 97.2 0.036 7.9E-07 57.9 19.4 256 142-429 33-305 (561)
324 KOG2315|consensus 97.2 0.021 4.6E-07 60.3 17.5 145 146-322 222-374 (566)
325 KOG0313|consensus 97.2 0.0092 2E-07 59.8 14.0 120 139-284 258-377 (423)
326 KOG0646|consensus 97.2 0.029 6.2E-07 57.9 17.7 217 144-401 84-324 (476)
327 KOG1538|consensus 97.2 0.083 1.8E-06 56.9 21.5 61 142-208 13-74 (1081)
328 TIGR02171 Fb_sc_TIGR02171 Fibr 97.2 0.032 6.9E-07 63.4 19.5 96 102-208 320-420 (912)
329 PF00151 Lipase: Lipase; Inte 97.1 0.0005 1.1E-08 71.1 5.1 114 484-601 67-185 (331)
330 KOG4283|consensus 97.1 0.29 6.4E-06 47.7 24.0 169 140-339 100-279 (397)
331 PF06028 DUF915: Alpha/beta hy 97.1 0.0047 1E-07 61.2 11.6 150 550-721 87-252 (255)
332 PF07676 PD40: WD40-like Beta 97.1 0.0016 3.5E-08 43.8 5.8 29 144-172 11-39 (39)
333 KOG0302|consensus 97.1 0.012 2.7E-07 58.8 14.1 159 146-337 216-379 (440)
334 KOG0319|consensus 97.0 0.06 1.3E-06 58.8 19.1 241 140-429 191-441 (775)
335 KOG0268|consensus 97.0 0.0097 2.1E-07 59.3 11.8 158 142-335 188-346 (433)
336 KOG0639|consensus 97.0 0.0064 1.4E-07 62.9 10.9 188 145-380 513-702 (705)
337 PF07819 PGAP1: PGAP1-like pro 97.0 0.0069 1.5E-07 59.2 11.0 104 488-598 4-118 (225)
338 KOG0313|consensus 97.0 0.09 2E-06 53.0 18.4 245 144-429 108-375 (423)
339 KOG0277|consensus 97.0 0.066 1.4E-06 51.1 16.6 239 146-429 13-264 (311)
340 KOG0303|consensus 97.0 0.17 3.7E-06 51.3 20.4 116 141-285 81-205 (472)
341 KOG2394|consensus 96.9 0.0026 5.6E-08 66.4 7.6 90 143-259 292-384 (636)
342 KOG0310|consensus 96.9 0.064 1.4E-06 55.7 17.3 222 142-411 27-253 (487)
343 KOG2183|consensus 96.9 0.0047 1E-07 63.0 9.1 133 469-604 62-204 (492)
344 PLN02733 phosphatidylcholine-s 96.9 0.0017 3.7E-08 69.6 6.4 83 510-601 113-199 (440)
345 KOG0640|consensus 96.9 0.024 5.2E-07 55.3 13.3 228 143-417 174-416 (430)
346 KOG0647|consensus 96.8 0.2 4.4E-06 49.1 19.2 238 142-429 28-280 (347)
347 KOG0306|consensus 96.8 0.2 4.2E-06 55.1 20.9 243 140-429 372-621 (888)
348 KOG1009|consensus 96.8 0.052 1.1E-06 55.1 15.5 113 144-266 126-247 (434)
349 PF10647 Gmad1: Lipoprotein Lp 96.8 0.15 3.3E-06 51.0 19.2 149 93-269 28-185 (253)
350 PF07519 Tannase: Tannase and 96.8 0.0055 1.2E-07 66.9 9.5 130 471-606 16-153 (474)
351 KOG0264|consensus 96.8 0.34 7.3E-06 50.1 21.2 226 168-429 147-403 (422)
352 PF04762 IKI3: IKI3 family; I 96.8 0.55 1.2E-05 55.8 26.5 264 98-386 31-335 (928)
353 PF00450 Peptidase_S10: Serine 96.7 0.0065 1.4E-07 66.1 9.8 141 462-606 16-184 (415)
354 KOG2110|consensus 96.7 0.0095 2.1E-07 59.6 9.2 89 127-235 154-250 (391)
355 COG3386 Gluconolactonase [Carb 96.7 0.14 3.1E-06 52.3 18.0 153 143-324 112-277 (307)
356 KOG1539|consensus 96.6 0.0074 1.6E-07 66.4 8.9 92 167-282 555-647 (910)
357 COG3391 Uncharacterized conser 96.6 0.58 1.3E-05 50.0 23.5 214 145-392 77-291 (381)
358 KOG0302|consensus 96.6 0.023 5E-07 57.0 11.4 128 131-284 248-379 (440)
359 KOG1524|consensus 96.6 0.046 1E-06 57.3 13.9 166 191-416 108-276 (737)
360 KOG0641|consensus 96.6 0.66 1.4E-05 43.4 23.8 246 142-429 33-302 (350)
361 KOG3967|consensus 96.6 0.02 4.3E-07 52.9 9.9 111 474-592 88-214 (297)
362 COG3391 Uncharacterized conser 96.6 1.4 3E-05 47.1 26.9 243 144-429 33-282 (381)
363 KOG0303|consensus 96.6 0.04 8.7E-07 55.7 12.8 165 139-336 129-294 (472)
364 KOG2110|consensus 96.6 0.042 9E-07 55.2 12.8 120 141-284 129-249 (391)
365 COG4814 Uncharacterized protei 96.6 0.075 1.6E-06 51.0 13.9 147 552-722 122-285 (288)
366 KOG0646|consensus 96.5 0.11 2.4E-06 53.7 15.7 176 226-429 62-246 (476)
367 KOG4499|consensus 96.5 0.7 1.5E-05 43.9 19.5 147 254-415 113-273 (310)
368 KOG0771|consensus 96.5 0.06 1.3E-06 54.9 13.6 183 191-412 148-340 (398)
369 PF05705 DUF829: Eukaryotic pr 96.5 0.069 1.5E-06 53.1 14.4 63 649-720 177-239 (240)
370 KOG2919|consensus 96.5 0.15 3.3E-06 50.3 15.6 140 275-429 133-280 (406)
371 KOG4378|consensus 96.5 0.17 3.6E-06 52.9 16.6 115 142-284 165-281 (673)
372 KOG0307|consensus 96.4 0.025 5.3E-07 64.7 11.5 166 141-339 116-287 (1049)
373 KOG0264|consensus 96.4 0.19 4.1E-06 51.9 16.5 202 146-383 182-403 (422)
374 KOG0277|consensus 96.4 0.86 1.9E-05 43.8 19.5 204 191-429 12-220 (311)
375 PF06977 SdiA-regulated: SdiA- 96.3 0.34 7.4E-06 47.8 17.6 208 144-381 24-247 (248)
376 KOG2931|consensus 96.3 0.39 8.5E-06 47.3 17.4 130 459-601 22-155 (326)
377 KOG2394|consensus 96.3 0.3 6.5E-06 51.6 17.4 128 142-319 220-349 (636)
378 KOG0274|consensus 96.2 0.49 1.1E-05 52.5 20.4 230 141-429 249-481 (537)
379 KOG0288|consensus 96.2 0.12 2.7E-06 52.6 14.0 219 143-412 221-447 (459)
380 KOG1539|consensus 96.2 0.017 3.6E-07 63.7 8.4 65 140-209 575-639 (910)
381 KOG0281|consensus 96.2 0.09 2E-06 52.2 12.5 192 197-429 195-387 (499)
382 KOG0288|consensus 96.1 0.065 1.4E-06 54.5 11.3 96 168-285 322-419 (459)
383 PF07082 DUF1350: Protein of u 96.1 0.16 3.4E-06 49.2 13.5 180 490-702 18-204 (250)
384 COG3490 Uncharacterized protei 96.1 1.6 3.6E-05 42.8 22.7 214 191-437 71-312 (366)
385 KOG0308|consensus 96.0 0.65 1.4E-05 50.4 19.0 277 146-469 29-319 (735)
386 PF02089 Palm_thioest: Palmito 96.0 0.031 6.8E-07 55.4 8.9 44 555-599 68-112 (279)
387 KOG2237|consensus 96.0 0.011 2.3E-07 63.9 5.8 107 102-210 97-205 (712)
388 KOG0299|consensus 96.0 2.5 5.5E-05 44.1 23.2 199 141-388 142-360 (479)
389 PF06977 SdiA-regulated: SdiA- 96.0 0.54 1.2E-05 46.4 17.1 202 190-427 24-247 (248)
390 KOG2096|consensus 95.9 0.45 9.8E-06 47.0 15.7 155 249-419 86-249 (420)
391 KOG4378|consensus 95.9 0.58 1.3E-05 49.0 17.1 199 167-405 100-302 (673)
392 KOG1282|consensus 95.8 0.057 1.2E-06 57.8 10.4 142 462-607 49-217 (454)
393 PF08386 Abhydrolase_4: TAP-li 95.8 0.014 3.1E-07 49.1 4.8 58 652-722 35-92 (103)
394 KOG3975|consensus 95.8 0.49 1.1E-05 45.4 15.0 129 469-601 10-145 (301)
395 PF01674 Lipase_2: Lipase (cla 95.7 0.026 5.7E-07 54.4 6.9 88 491-587 4-94 (219)
396 PF13360 PQQ_2: PQQ-like domai 95.7 1.6 3.5E-05 43.0 20.2 216 169-437 4-232 (238)
397 PLN02209 serine carboxypeptida 95.7 0.029 6.3E-07 60.5 7.6 141 461-606 43-215 (437)
398 PLN03016 sinapoylglucose-malat 95.6 0.029 6.3E-07 60.5 7.5 132 469-606 49-213 (433)
399 KOG0267|consensus 95.6 0.032 7E-07 60.6 7.6 116 140-284 69-185 (825)
400 KOG4283|consensus 95.6 1.1 2.3E-05 44.0 16.9 120 143-286 145-279 (397)
401 PF00975 Thioesterase: Thioest 95.5 0.029 6.3E-07 55.3 6.6 84 490-588 2-86 (229)
402 PF03096 Ndr: Ndr family; Int 95.5 0.33 7.1E-06 48.4 13.6 126 465-602 5-133 (283)
403 KOG0276|consensus 95.5 1.1 2.3E-05 48.5 17.9 196 144-383 58-256 (794)
404 PF07676 PD40: WD40-like Beta 95.5 0.042 9.1E-07 36.7 5.2 29 251-279 10-39 (39)
405 PF05990 DUF900: Alpha/beta hy 95.5 0.053 1.2E-06 53.3 8.1 113 486-605 16-139 (233)
406 PF13360 PQQ_2: PQQ-like domai 95.5 1.5 3.2E-05 43.3 18.7 191 149-389 32-235 (238)
407 KOG4328|consensus 95.4 2.9 6.3E-05 43.7 20.1 244 142-429 235-494 (498)
408 KOG0269|consensus 95.4 0.36 7.8E-06 53.3 14.5 198 140-374 132-332 (839)
409 KOG0285|consensus 95.4 0.75 1.6E-05 46.2 15.4 187 191-429 155-347 (460)
410 PF11187 DUF2974: Protein of u 95.4 0.035 7.6E-07 54.0 6.3 73 525-598 42-118 (224)
411 KOG4388|consensus 95.2 0.045 9.7E-07 58.2 6.9 88 487-586 395-487 (880)
412 COG3490 Uncharacterized protei 95.2 3.4 7.4E-05 40.6 19.2 82 125-206 90-180 (366)
413 KOG2182|consensus 95.1 0.15 3.4E-06 53.9 10.4 123 474-601 73-205 (514)
414 KOG2565|consensus 95.1 0.076 1.7E-06 53.7 7.7 120 468-600 132-261 (469)
415 KOG1920|consensus 95.1 9.7 0.00021 45.0 26.4 225 142-383 69-321 (1265)
416 KOG1408|consensus 95.0 0.94 2E-05 49.7 15.9 106 310-429 604-712 (1080)
417 PF12048 DUF3530: Protein of u 95.0 2 4.4E-05 44.3 18.3 137 459-602 62-228 (310)
418 KOG1007|consensus 95.0 2.2 4.9E-05 41.8 16.9 113 143-284 125-246 (370)
419 KOG1408|consensus 94.9 0.22 4.7E-06 54.4 10.7 122 125-268 57-184 (1080)
420 PLN02633 palmitoyl protein thi 94.8 0.47 1E-05 47.7 12.4 101 486-599 24-127 (314)
421 KOG0290|consensus 94.8 3.5 7.6E-05 40.5 17.6 256 143-429 46-317 (364)
422 PRK02888 nitrous-oxide reducta 94.8 2 4.4E-05 47.6 18.2 114 253-387 238-354 (635)
423 KOG0281|consensus 94.5 0.36 7.9E-06 48.1 10.6 216 163-429 212-427 (499)
424 KOG2321|consensus 94.3 1 2.3E-05 48.1 14.0 93 328-430 155-258 (703)
425 PRK13613 lipoprotein LpqB; Pro 94.2 6.3 0.00014 44.5 20.9 172 143-339 364-542 (599)
426 KOG1034|consensus 94.0 7.3 0.00016 39.1 24.4 97 166-283 113-211 (385)
427 KOG1523|consensus 94.0 2.5 5.5E-05 42.1 15.1 201 191-429 14-235 (361)
428 KOG0290|consensus 93.9 1.4 3E-05 43.2 12.7 191 113-338 121-320 (364)
429 KOG2541|consensus 93.8 1.1 2.3E-05 43.8 11.9 90 488-591 24-115 (296)
430 KOG0647|consensus 93.7 3.6 7.9E-05 40.7 15.3 152 251-429 29-183 (347)
431 KOG0300|consensus 93.5 5.1 0.00011 39.7 16.0 154 251-430 274-428 (481)
432 KOG1523|consensus 93.4 2.2 4.8E-05 42.5 13.4 121 143-284 102-237 (361)
433 PF04762 IKI3: IKI3 family; I 93.4 6.2 0.00013 47.2 20.1 109 145-269 213-324 (928)
434 KOG0321|consensus 93.3 12 0.00027 41.0 19.9 63 140-207 99-164 (720)
435 PLN02606 palmitoyl-protein thi 93.3 0.84 1.8E-05 45.9 10.8 100 486-598 25-127 (306)
436 KOG2100|consensus 93.3 21 0.00045 41.9 26.9 63 147-209 102-169 (755)
437 COG3204 Uncharacterized protei 93.0 11 0.00023 37.7 19.7 133 126-282 71-211 (316)
438 KOG1920|consensus 92.9 26 0.00055 41.8 25.2 123 192-337 200-323 (1265)
439 KOG0269|consensus 92.8 1.2 2.6E-05 49.4 11.9 118 143-284 178-297 (839)
440 KOG1538|consensus 92.8 2.5 5.5E-05 46.1 14.0 55 251-318 14-69 (1081)
441 KOG0292|consensus 92.7 15 0.00032 42.0 20.0 238 142-429 10-279 (1202)
442 KOG0649|consensus 92.5 7.8 0.00017 37.2 15.2 61 362-429 125-185 (325)
443 TIGR03300 assembly_YfgL outer 92.5 17 0.00037 38.8 26.6 109 261-395 241-349 (377)
444 KOG0276|consensus 92.5 20 0.00042 39.4 20.5 220 142-406 14-237 (794)
445 PF05057 DUF676: Putative seri 92.4 0.14 3.1E-06 49.8 4.1 21 567-587 77-97 (217)
446 PRK10252 entF enterobactin syn 92.4 0.49 1.1E-05 59.9 9.9 99 488-601 1068-1169(1296)
447 KOG0649|consensus 92.3 3.5 7.6E-05 39.5 12.6 74 310-393 122-195 (325)
448 PRK13614 lipoprotein LpqB; Pro 92.2 17 0.00036 40.8 20.0 169 143-339 344-521 (573)
449 KOG0268|consensus 92.0 1.6 3.4E-05 44.2 10.6 133 226-383 211-344 (433)
450 KOG4328|consensus 92.0 18 0.00038 38.1 18.2 204 142-383 187-398 (498)
451 KOG1007|consensus 92.0 1.8 3.8E-05 42.5 10.6 115 140-282 169-288 (370)
452 KOG2111|consensus 91.8 0.71 1.5E-05 45.8 7.9 75 138-232 178-255 (346)
453 KOG4227|consensus 91.7 5.1 0.00011 40.9 13.8 117 141-284 56-180 (609)
454 KOG0274|consensus 91.7 6.1 0.00013 44.0 16.1 184 164-392 307-490 (537)
455 KOG4532|consensus 91.6 6.6 0.00014 38.3 13.8 128 252-393 161-291 (344)
456 KOG1963|consensus 91.6 2.5 5.4E-05 47.6 12.7 115 140-284 204-323 (792)
457 PF02450 LCAT: Lecithin:choles 91.5 0.27 5.9E-06 52.5 5.4 83 510-601 70-158 (389)
458 PF07519 Tannase: Tannase and 91.4 0.33 7.1E-06 53.2 5.9 70 654-723 356-426 (474)
459 PF04083 Abhydro_lipase: Parti 91.4 0.74 1.6E-05 34.5 5.9 51 454-504 7-59 (63)
460 PRK13615 lipoprotein LpqB; Pro 91.3 16 0.00035 40.7 18.7 167 144-339 336-505 (557)
461 PF13449 Phytase-like: Esteras 91.2 21 0.00046 37.2 20.2 148 114-270 111-308 (326)
462 KOG0650|consensus 91.1 9.8 0.00021 41.3 15.8 111 252-384 524-637 (733)
463 TIGR03300 assembly_YfgL outer 91.1 24 0.00052 37.6 30.9 97 313-429 240-337 (377)
464 PF13449 Phytase-like: Esteras 90.9 19 0.00041 37.5 18.2 130 254-384 89-251 (326)
465 PF11288 DUF3089: Protein of u 90.9 0.31 6.8E-06 46.2 4.4 86 518-604 45-138 (207)
466 PF01764 Lipase_3: Lipase (cla 90.9 0.4 8.7E-06 42.9 5.0 38 549-588 47-84 (140)
467 COG3319 Thioesterase domains o 90.9 0.4 8.8E-06 47.5 5.4 84 489-588 1-85 (257)
468 COG2939 Carboxypeptidase C (ca 90.8 0.52 1.1E-05 50.3 6.4 113 485-601 98-240 (498)
469 KOG2321|consensus 90.7 22 0.00047 38.7 17.8 107 310-429 236-345 (703)
470 KOG1332|consensus 90.6 17 0.00037 35.1 15.8 92 152-266 22-119 (299)
471 COG4782 Uncharacterized protei 90.2 1 2.2E-05 46.1 7.5 114 486-607 114-238 (377)
472 KOG1063|consensus 90.1 2.2 4.8E-05 46.8 10.3 99 98-207 535-638 (764)
473 COG1075 LipA Predicted acetylt 90.1 0.94 2E-05 47.4 7.6 97 490-601 61-162 (336)
474 KOG3914|consensus 89.9 11 0.00023 39.0 14.3 95 166-285 130-225 (390)
475 KOG1963|consensus 89.7 2.9 6.2E-05 47.2 11.1 116 143-284 253-376 (792)
476 KOG0294|consensus 89.6 24 0.00053 35.4 20.6 190 142-384 84-281 (362)
477 COG4257 Vgb Streptogramin lyas 89.5 23 0.0005 35.0 22.5 203 146-395 108-315 (353)
478 PHA03098 kelch-like protein; P 89.4 32 0.00069 38.7 19.9 100 275-388 406-515 (534)
479 KOG0270|consensus 89.3 31 0.00068 36.2 20.7 195 192-429 248-448 (463)
480 KOG2041|consensus 89.2 42 0.00091 37.6 19.1 236 139-418 69-330 (1189)
481 COG3204 Uncharacterized protei 89.0 11 0.00025 37.5 13.3 69 146-233 133-212 (316)
482 KOG0267|consensus 88.8 0.85 1.8E-05 50.1 6.1 101 140-265 153-254 (825)
483 PRK11138 outer membrane biogen 88.7 38 0.00082 36.4 28.7 98 275-394 266-363 (394)
484 KOG1034|consensus 88.3 31 0.00067 34.9 20.3 147 156-337 56-212 (385)
485 cd00741 Lipase Lipase. Lipase 88.0 0.66 1.4E-05 42.3 4.2 25 566-590 26-50 (153)
486 KOG1332|consensus 87.8 6.1 0.00013 38.0 10.3 116 140-283 148-286 (299)
487 KOG3914|consensus 87.6 11 0.00024 38.8 12.7 74 310-393 159-232 (390)
488 PHA03098 kelch-like protein; P 87.2 15 0.00032 41.4 15.4 145 275-445 358-519 (534)
489 PF04053 Coatomer_WDAD: Coatom 87.1 30 0.00065 37.6 16.7 140 144-336 35-175 (443)
490 PF03283 PAE: Pectinacetyleste 86.4 0.49 1.1E-05 49.7 2.7 37 550-586 138-174 (361)
491 KOG0321|consensus 86.0 24 0.00052 38.8 14.7 114 147-284 223-348 (720)
492 TIGR02604 Piru_Ver_Nterm putat 86.0 24 0.00053 37.4 15.4 17 252-269 126-142 (367)
493 KOG1230|consensus 85.8 18 0.00039 37.7 13.1 189 115-319 98-313 (521)
494 KOG0300|consensus 85.5 42 0.00091 33.6 16.5 94 167-284 293-387 (481)
495 KOG3724|consensus 85.5 0.91 2E-05 50.8 4.2 46 550-596 157-209 (973)
496 KOG0308|consensus 85.2 8 0.00017 42.4 10.8 115 141-284 171-286 (735)
497 PLN02454 triacylglycerol lipas 85.1 1.4 3E-05 46.5 5.2 40 548-587 208-247 (414)
498 KOG4532|consensus 85.0 29 0.00064 34.0 13.4 118 144-285 161-284 (344)
499 KOG0270|consensus 84.9 56 0.0012 34.5 17.8 100 163-284 261-361 (463)
500 KOG1036|consensus 84.6 46 0.001 33.3 15.7 146 251-429 15-162 (323)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-106 Score=839.26 Aligned_cols=664 Identities=28% Similarity=0.475 Sum_probs=599.5
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCC--ChhHHHHHHHhhhhhHHhhcCC-chHHHHHHHHHHhccCCccCCc
Q psy4818 20 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPH--CAETQIFNFMQNNISNPYCQNH-TDREAIKEQLLRMANYEKYSAP 96 (734)
Q Consensus 20 ~~~~P~~~~~~~~~~~~hg~~~~D~y~wled~~--~~~~~~~~~~q~~~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p 96 (734)
.+.||.|+|.|+. .+.||+++.|+|+||+|.+ +|++++||++||+|+++.++++ ++++.|++||+.+++.++.|+|
T Consensus 3 ~p~pP~a~k~~~~-~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp 81 (682)
T COG1770 3 LPLPPIAKKVPTT-RTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVP 81 (682)
T ss_pred CCCCCCcccccee-eeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCc
Confidence 3578999999965 8999999999999999998 9999999999999999999999 9999999999999999999999
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCC-eEEEeCCCCcCCC-CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEE
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLTGS-TEVFLDPNKLSKD-GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 174 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~l~d~~~~~~~-~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~d 174 (734)
..+|+|.||.+...++++++.||....++. +++|||+|+++++ .++.++.+++|||+++|||+.|..|++.++|+++|
T Consensus 82 ~~~~~~~Yy~r~~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kd 161 (682)
T COG1770 82 YRKGPYEYYSRTEEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKD 161 (682)
T ss_pred cccCCeeEEEEecCCCcceeEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEEe
Confidence 999999999999998999988886655555 9999999999988 68999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEE
Q psy4818 175 VDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 254 (734)
Q Consensus 175 l~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~ 254 (734)
+++|+.+.+.+.++. .+++|.+|+++|+|++.++ ..++.+|++|.++++..++.+||++++ +.|+.+
T Consensus 162 L~tg~~~~d~i~~~~-~~~~Wa~d~~~lfYt~~d~-----------~~rp~kv~~h~~gt~~~~d~lvyeE~d-~~f~~~ 228 (682)
T COG1770 162 LATGEELPDEITNTS-GSFAWAADGKTLFYTRLDE-----------NHRPDKVWRHRLGTPGSSDELVYEEKD-DRFFLS 228 (682)
T ss_pred cccccccchhhcccc-cceEEecCCCeEEEEEEcC-----------CCCcceEEEEecCCCCCcceEEEEcCC-CcEEEE
Confidence 999999888887754 7899999999999999876 358899999999998888999999976 459999
Q ss_pred EEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEE
Q psy4818 255 SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTI 333 (734)
Q Consensus 255 ~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~ 333 (734)
+.-|.+.++|++..++. ..+++++++.+. +. ..+ .++..+..+..+ ..+.|+.+|+.+|.++.+++|+..
T Consensus 229 v~~s~s~~yi~i~~~~~-~tsE~~ll~a~~-p~------~~p-~vv~pr~~g~eY~~eh~~d~f~i~sN~~gknf~l~~a 299 (682)
T COG1770 229 VGRSRSEAYIVISLGSH-ITSEVRLLDADD-PE------AEP-KVVLPRENGVEYSVEHGGDRFYILSNADGKNFKLVRA 299 (682)
T ss_pred eeeccCCceEEEEcCCC-cceeEEEEecCC-CC------Cce-EEEEEcCCCcEEeeeecCcEEEEEecCCCcceEEEEc
Confidence 99999999999987553 348999999987 22 222 333344445554 778899999999999999999999
Q ss_pred ecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC--CceE-EeeccCcccce
Q psy4818 334 NLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD--LGQI-THISGRRKYNE 410 (734)
Q Consensus 334 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~--~g~v-~~~~~~~d~~~ 410 (734)
.+ ...+++|+.++++.+...++++..+. +++++..++++.++|++++..+|++ ..|.++ .... .+....++.+.
T Consensus 300 p~-~~~~~~w~~~I~h~~~~~l~~~~~f~-~~lVl~eR~~glp~v~v~~~~~~~~-~~i~f~~~ay~~~l~~~~e~~s~~ 376 (682)
T COG1770 300 PV-SADKSNWRELIPHREDVRLEGVDLFA-DHLVLLERQEGLPRVVVRDRKTGEE-RGIAFDDEAYSAGLSGNPEFDSDR 376 (682)
T ss_pred cC-CCChhcCeeeeccCCCceeeeeeeec-cEEEEEecccCCceEEEEecCCCce-eeEEecchhhhccccCCCCCCCcc
Confidence 88 55566899999999888999999888 8999999999999999999988876 446655 2222 13344567889
Q ss_pred EEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCC-CCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCc
Q psy4818 411 VFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPE-FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNP 489 (734)
Q Consensus 411 l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P 489 (734)
+.+.++|+++|.++|.+|+ +++ +++++++.++++ ++++.|.++++|.++.||++||++|++.++++.+++.|
T Consensus 377 lR~~ysS~ttP~~~~~~dm-----~t~--er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p 449 (682)
T COG1770 377 LRYSYSSMTTPATLFDYDM-----ATG--ERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAP 449 (682)
T ss_pred EEEEeecccccceeEEeec-----cCC--cEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCc
Confidence 9999999999999999999 788 899999999886 99999999999999999999999999999988899999
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
++||+||+||.++.+.|+..++.+|.+ ||+++++|+||||+.|+.|+++|+...|+|+|+||++|+++|++++++++++
T Consensus 450 ~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~ 528 (682)
T COG1770 450 LLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDR 528 (682)
T ss_pred EEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccc
Confidence 999999999999999999988898875 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-----ccCcccccccCCCCCHHHHHHHHhCCccCCCCC
Q psy4818 570 ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-----TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 644 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 644 (734)
|+++|+|+||+|++++++++|++|+++|+.+||+|+++++.. +.. .| .|||||.+++.++++++||||.||.+
T Consensus 529 i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~-E~-~EWGNP~d~e~y~yikSYSPYdNV~a 606 (682)
T COG1770 529 IVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVT-EW-DEWGNPLDPEYYDYIKSYSPYDNVEA 606 (682)
T ss_pred eEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCcc-ch-hhhCCcCCHHHHHHHhhcCchhcccc
Confidence 999999999999999999999999999999999999987632 222 23 79999999999999999999999998
Q ss_pred CCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 645 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 645 p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
..||++|++.|.+|+||.+||+.|++++|++. ++++.|++|.+.+++||++.+.+.++++..+..++|+.+.
T Consensus 607 ----~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~----~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~~ 678 (682)
T COG1770 607 ----QPYPAILVTTGLNDPRVQYWEPAKWVAKLREL----KTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLKL 678 (682)
T ss_pred ----CCCCceEEEccccCCccccchHHHHHHHHhhc----ccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999999999998 7778899999999999999999999999999999999988
Q ss_pred cCC
Q psy4818 725 LGL 727 (734)
Q Consensus 725 l~~ 727 (734)
++.
T Consensus 679 ~~~ 681 (682)
T COG1770 679 AGT 681 (682)
T ss_pred ccC
Confidence 764
No 2
>KOG2237|consensus
Probab=100.00 E-value=1.2e-101 Score=793.09 Aligned_cols=703 Identities=38% Similarity=0.657 Sum_probs=588.0
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEe
Q psy4818 20 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQ 99 (734)
Q Consensus 20 ~~~~P~~~~~~~~~~~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 99 (734)
++.||+++|+.++++.+||+++.|||+||||+++.++.+||++||.||+++|+..+..++|+.+|+.++.++++++|.+.
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d~~~~~~fv~~en~~t~~vl~~~e~~~kl~~em~~~i~ye~~~~p~r~ 82 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPDDTEMKEFVEAENKYTDAVLEDTETKEKLFSEMTKRIDYEIITPPLRW 82 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCcHHHHHHHHHHhhhhhHHHHhccHHHHHHHHHhhhccCccccCCcccc
Confidence 35789999988888999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
|+|+||.++.+++ |+.+|+++....++++++|++.++.+++..+..-++|-|++|++|..+..|.++..|.....+.|+
T Consensus 83 G~~yyY~~n~~lk-q~vl~~rr~~~~e~~~~ld~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~ 161 (712)
T KOG2237|consen 83 GPWYYYFYNTGLK-QYVLYCRRLLEKEEEVFLDPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGK 161 (712)
T ss_pred CCEEEEEEcCCce-ehhHHHHhhhhcccceecCCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCC
Confidence 9999999999988 666666655567777888888777777666666666666666666666666666666655555555
Q ss_pred cccccccccccCeeEEEcCCcEEEEEEEecCCCC--CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE
Q psy4818 180 DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGT--ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV 257 (734)
Q Consensus 180 ~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 257 (734)
.+.+...+..++.++|.+|++.++|.+-...++. -.++.+..+++++||+|.+|+.+.+|++++++++++.+......
T Consensus 162 e~~~~v~~~~~~~~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~~ 241 (712)
T KOG2237|consen 162 ELFTVVIDVKFSGPVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISET 241 (712)
T ss_pred ccceeeeeeccCCceeeccCCceEeeeecccCCceeeeeeeccccCcceEEEEecccCCCcceEEEecCCCCeEEEEEEE
Confidence 4444455555566777777777777665442222 13344457899999999999999999999999999877776677
Q ss_pred ecCCcEEEEEEecCCCC-ceEEEEeCCCCCCCcccC-CCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 258 TDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGKISG-KFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 258 SpDG~~l~~~~~~~~~~-~~i~~~d~~~~~~~~l~~-~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
+.+|++.+.+.++.++. +.+|++|+.. +...+.. -.++..++..+...+.++..++..++|.+|.+++++.+.++++
T Consensus 242 kD~~~~~i~si~~t~s~~~~vf~~d~~~-~~~gl~~~~~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~~p~y~l~r~~~ 320 (712)
T KOG2237|consen 242 KDSGFYTINSISETCSPVNKVFLCDLSS-PSDGLELLILPRVKGVDCFVEHYDFITNEGTEFYFLTNKDAPNYYLLRIDV 320 (712)
T ss_pred ecCceEEEEEeeccCCccceEEEEeccc-ccCCcchheeeccchhhhhhhhhhheeccCcceeeeccCCCCceeEEeeec
Confidence 77777777666665553 7999999987 3333321 1223333333444445678889999999999999999999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEE
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ 415 (734)
...+...|+.++.+.+..++.++...+++.+++....+....+.+.++.+|..++.+++|.+++..+....+.+.++|.+
T Consensus 321 ~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l~g~~~~~fpLpv~sv~~~~g~~~~~~~~f~~ 400 (712)
T KOG2237|consen 321 KEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLLDGSLLRSFPLPVGSVSGTSGDFKSSTIRFQF 400 (712)
T ss_pred cCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccccCceeeeecCCCCcccccccCCCCceEEEEE
Confidence 87766789999999888888888888878888888887766666677778888899999988887777778889999999
Q ss_pred ecCCCCceEEEEeCCCCcCCCCCCceeEEeeccC--CCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEE
Q psy4818 416 TSFLQPGTIYHCNIPENITDQDDFKPTIFRETIV--PEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY 493 (734)
Q Consensus 416 ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~ 493 (734)
+|+.+|+.+|.||+ ++++.+..+++.... ++++.+.|.+++++++|+||++||++|++.++.+.+++.|++||
T Consensus 401 sS~l~P~~iy~yDl-----~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLy 475 (712)
T KOG2237|consen 401 SSFLTPGSIYDYDL-----ANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLY 475 (712)
T ss_pred eccCCCCeEEEeec-----cCCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEE
Confidence 99999999999999 566545666766654 78999999999999999999999999999888888899999999
Q ss_pred ecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEE
Q psy4818 494 GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIM 573 (734)
Q Consensus 494 ~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~ 573 (734)
+||||+.++.++|....+.++. +|++.+.+|+|||||+|..||+.|++..|+|.|+||++|++||+++|++.|+++++.
T Consensus 476 gYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~ 554 (712)
T KOG2237|consen 476 GYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIE 554 (712)
T ss_pred EecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEe
Confidence 9999999999999999888887 699999999999999999999999999999999999999999999999999999999
Q ss_pred EcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCc
Q psy4818 574 GGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPA 653 (734)
Q Consensus 574 G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~ 653 (734)
|+|+||+|++++++++||+|+|+|+.+||+|+++++.+++++.|..+|+...+++.++.+.+++||+++++|.....||.
T Consensus 555 G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS 634 (712)
T KOG2237|consen 555 GGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPS 634 (712)
T ss_pred cccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcc
Confidence 99999999999999999999999999999999999999999999887766555555555555555554444322256999
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 654 TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 654 ~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
+||+++.+|+||+++|+.+++++||+.........+|+.+.+.+++||+..+++.+++++.+..++||.+.++..+.
T Consensus 635 ~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~~~~ 711 (712)
T KOG2237|consen 635 MLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNSDWI 711 (712)
T ss_pred eEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcCccC
Confidence 99999999999999999999999999876554445789999999999999999999999999999999999987764
No 3
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=6.5e-98 Score=838.68 Aligned_cols=661 Identities=25% Similarity=0.434 Sum_probs=555.4
Q ss_pred CCCCccCCceeccccCceecCCCcccCCC--CChhHHHHHHHhhhhhHHhhcCC-chHHHHHHHHHHhccCCccCCcEEe
Q psy4818 23 YPKVRKDETVEDDYHGMKIKDPYRWLEYP--HCAETQIFNFMQNNISNPYCQNH-TDREAIKEQLLRMANYEKYSAPQRQ 99 (734)
Q Consensus 23 ~P~~~~~~~~~~~~hg~~~~D~y~wled~--~~~~~~~~~~~q~~~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~~~ 99 (734)
||.++++|++ +++||+++.|||+||||. ++|++++||++||+|++++|+++ +++++|+++|++++..++.+.|...
T Consensus 2 pP~a~~~~~~-~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 80 (686)
T PRK10115 2 LPKAARIPHA-MTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIK 80 (686)
T ss_pred cCCCCCCCee-EEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEE
Confidence 6788999965 899999999999999996 59999999999999999999996 9999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCC-C---CCeEEEeCCCCcCCC-CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEE
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNL-T---GSTEVFLDPNKLSKD-GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 174 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~-~---g~~~~l~d~~~~~~~-~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~d 174 (734)
|+++||.++..+++ ..||++... + +.+++|||+|+++++ +++.+.++.|||||++|||+.+.+|+|+++|+++|
T Consensus 81 g~~~y~~~~~~g~~-~~~~~r~~~~~~~~~~~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d 159 (686)
T PRK10115 81 NGYRYRHIYEPGCE-YAIYQRQSAFSEEWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRN 159 (686)
T ss_pred CCEEEEEEEcCCCc-cEEEEEecCCCCCCCCCEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEE
Confidence 99989888876664 555555432 2 458999999999655 68999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEE
Q psy4818 175 VDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 254 (734)
Q Consensus 175 l~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~ 254 (734)
+.+|+.+.+.+.++. ..++|++||++|+|++.++. ..++.+||+|++++++.++++|++++++. +...
T Consensus 160 ~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~~~~~~----------~~~~~~v~~h~lgt~~~~d~lv~~e~~~~-~~~~ 227 (686)
T PRK10115 160 LETGNWYPELLDNVE-PSFVWANDSWTFYYVRKHPV----------TLLPYQVWRHTIGTPASQDELVYEEKDDT-FYVS 227 (686)
T ss_pred CCCCCCCCccccCcc-eEEEEeeCCCEEEEEEecCC----------CCCCCEEEEEECCCChhHCeEEEeeCCCC-EEEE
Confidence 999987777776665 46999999999999997431 23668999999999988899999986654 4445
Q ss_pred EEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEe
Q psy4818 255 SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTIN 334 (734)
Q Consensus 255 ~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d 334 (734)
...|.|++++++...+. ..+++++++++. .. ...+..+.......+. +.+.++.+|+.+|.++++++|+.++
T Consensus 228 ~~~s~d~~~l~i~~~~~-~~~~~~l~~~~~-~~-----~~~~~~~~~~~~~~~~-~~~~~~~ly~~tn~~~~~~~l~~~~ 299 (686)
T PRK10115 228 LHKTTSKHYVVIHLASA-TTSEVLLLDAEL-AD-----AEPFVFLPRRKDHEYS-LDHYQHRFYLRSNRHGKNFGLYRTR 299 (686)
T ss_pred EEEcCCCCEEEEEEECC-ccccEEEEECcC-CC-----CCceEEEECCCCCEEE-EEeCCCEEEEEEcCCCCCceEEEec
Confidence 56677999998776654 337888888543 11 0112222222222232 4466789999999988999999999
Q ss_pred cCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEe--eccCcccceE
Q psy4818 335 LNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITH--ISGRRKYNEV 411 (734)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~--~~~~~d~~~l 411 (734)
+.+. .+|+.++++.+...++.+.+.. +++++....++.++|+++++. ++.++.|..+ ...+.. .+.+++++.+
T Consensus 300 ~~~~--~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 375 (686)
T PRK10115 300 VRDE--QQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRK-TREVIGIAFDDPAYVTWIAYNPEPETSRL 375 (686)
T ss_pred CCCc--ccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCC-CCceEEecCCCCceEeeecccCCCCCceE
Confidence 8742 3589999996566788887775 899999999999999999985 4344666532 222223 3333667789
Q ss_pred EEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEE
Q psy4818 412 FYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVI 491 (734)
Q Consensus 412 ~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~v 491 (734)
++.++|+++|+++|.+|+ .++ +.++++....+.+++..+.+|++++++.||.+||++++++++...+++.|+|
T Consensus 376 ~~~~ss~~~P~~~y~~d~-----~~~--~~~~l~~~~~~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~l 448 (686)
T PRK10115 376 RYGYSSMTTPDTLFELDM-----DTG--ERRVLKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLL 448 (686)
T ss_pred EEEEecCCCCCEEEEEEC-----CCC--cEEEEEecCCCCcCccccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEE
Confidence 999999999999999999 566 5777877666668888889999999999999999988887765456778999
Q ss_pred EEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEE
Q psy4818 492 IYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYIT 571 (734)
Q Consensus 492 v~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~ 571 (734)
|++||||+.+..+.|+..++.|++ +||+|+++|+|||+|||++|+++++..++.++++|+++|+++|++++++||+||+
T Consensus 449 l~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~ 527 (686)
T PRK10115 449 VYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCY 527 (686)
T ss_pred EEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeE
Confidence 999999999999999998866655 6999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc---cccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCC
Q psy4818 572 IMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK---FTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 648 (734)
Q Consensus 572 i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~ 648 (734)
|+|+|+||+|++++++++|++|+|+|+.+|++|+++++. +.....|..+||+|.+++.+++|+++||++|+++
T Consensus 528 i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~---- 603 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTA---- 603 (686)
T ss_pred EEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCc----
Confidence 999999999999999999999999999999999998752 2333446688999998888999999999999997
Q ss_pred ccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc---EEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 649 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP---LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 649 ~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+++|++||+||.+|+|||++|++||+++|++. +++ +.+++.+++||+....+.+.+++.++.++||.+.+
T Consensus 604 ~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~-------~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~ 676 (686)
T PRK10115 604 QAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL-------KTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALA 676 (686)
T ss_pred cCCCceeEEecCCCCCcCchHHHHHHHHHHhc-------CCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 89998999999999999999999999999998 555 55555599999988888888999999999999999
Q ss_pred CCC
Q psy4818 726 GLK 728 (734)
Q Consensus 726 ~~~ 728 (734)
+..
T Consensus 677 ~~~ 679 (686)
T PRK10115 677 QGT 679 (686)
T ss_pred CCc
Confidence 875
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-88 Score=692.50 Aligned_cols=634 Identities=34% Similarity=0.562 Sum_probs=521.2
Q ss_pred ecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEeCCeEEEEEEcCCCCeeEEEEE
Q psy4818 41 IKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQ 120 (734)
Q Consensus 41 ~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~~ 120 (734)
..|||+||||++++|+++|+++||+.|..+|...+.++.+.+++.+++..++.+.|...|+++|..+++. ++...+||+
T Consensus 2 ~~DPy~wlEd~~~~eal~wv~~~N~~t~~~L~~~~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D~-~~p~Glwr~ 80 (648)
T COG1505 2 VPDPYRWLEDLDSAEALKWVEAQNAKTREFLGEDSARAASDKRLLELWDYEDIPIPFERGGRYYNFWQDA-LYPRGLYRR 80 (648)
T ss_pred CCCcchhhhcCCcHHHHHHHHhhhhHHHHHhhcchhhHHHHHHHHHHhhccccCcceeccceeEEeeccc-cCcceeEEe
Confidence 4799999999999999999999999999999999999999999999999999999999999999999886 455678988
Q ss_pred eCC------CCCeEEEeCCCCcCCCC--cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCe
Q psy4818 121 RNL------TGSTEVFLDPNKLSKDG--TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPS 192 (734)
Q Consensus 121 ~~~------~g~~~~l~d~~~~~~~~--~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~ 192 (734)
... .++|++|+|+++|+++. .+.+++.+.+||+++++|+.+.+|++...++++|++||..+... +..+.+
T Consensus 81 ttl~syrs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~~fv~~~--~f~~~~ 158 (648)
T COG1505 81 TTLETYRSAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETGEFVEEE--GFKFPG 158 (648)
T ss_pred ecceeecccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEecccccccCC--Cccccc
Confidence 643 57899999999999773 78889999999999999999999999999999999999877654 333456
Q ss_pred eEEEcCCcEEEEEEEecCCCCCCCCcccccCCc---EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 193 ISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ---KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 193 ~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~---~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
+.|..++ +++|++...+ +..+.+..+. .+++..+.+++..++.++...+-+.++.....+.|+++.+....
T Consensus 159 ~~wld~d-~~~~~~~~~~-----~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~~f~~~~~ 232 (648)
T COG1505 159 ISWLDDD-GVFVSRYWRP-----KEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGDFFMLSLW 232 (648)
T ss_pred eEEecCC-CEEEecccCC-----cccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccchhhheee
Confidence 9998887 7888776542 2233455554 44555566788888888876655545566677777777664333
Q ss_pred cCCCC-ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 270 NNTQG-SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 270 ~~~~~-~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
-..+. ..++ +++-+. + ...+..++...+..+.....+...+++.+... +..+. ...++.
T Consensus 233 ~~~~~~~~~~-l~~p~~----~--~~~~~~l~~~~r~dw~~~~~~~g~l~l~~~e~----------~~~g~---~~a~~~ 292 (648)
T COG1505 233 LGTSGKGLIK-LGLPDK----V--GYEWGKLVNTLRADWTFADVDYGLLYLLTDED----------LELGK---VIAEFI 292 (648)
T ss_pred EeccCCCcee-ccCCcc----c--cceeeeeeEeecccccccCcccceEEEEehhc----------cccCc---eeEEec
Confidence 22221 2233 222220 0 01122222222222222122222233322221 11122 222444
Q ss_pred CCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 349 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
+.+...++++..++ +++++....+..+++.++++ +|...+.+.++ .+.+..++.+.+++.+++.++++++|+++|++
T Consensus 293 P~~~~~le~v~tt~-~~~va~~l~nv~~~l~v~~~-~g~~~~~v~l~~~ga~~~~~~~~~g~ev~l~~t~F~tP~~~~r~ 370 (648)
T COG1505 293 PEEEQSLEQVVTTK-DKLVAGTLDNVSGRLEVYDL-KGERIEEVELPPPGALGMGSADKDGDEVFLAFTSFTTPSTLYRL 370 (648)
T ss_pred CCcccceeeeEEEc-CeEEeeeehhccceEEEecc-CceEeeecccCCccceeeccCCCCCcEEEEEeecccCCCceEEE
Confidence 44478888888887 89999999999889999998 57777888877 67775556667889999999999999999999
Q ss_pred eCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc
Q psy4818 428 NIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS 507 (734)
Q Consensus 428 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~ 507 (734)
++ .++ +++.++.... .|+++++.+++.+.+|.||++||.++++ ++.+.+ +.|++||.|||+..+..|.|+
T Consensus 371 ~~-----~~~--eLe~ik~~p~-~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs 440 (648)
T COG1505 371 DL-----FGG--ELEVIREQPV-QFDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFS 440 (648)
T ss_pred ec-----CCc--eehhhhhccC-CcCccCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccc
Confidence 99 345 5666666444 5999999999999999999999999999 887767 899999999999999999999
Q ss_pred HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh
Q psy4818 508 ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 508 ~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~ 587 (734)
+.+..||. +|++++.+|+|||||||+.||+++.+.++++.|+||.++++.|++++++.|++++|.|+|+||+|+.++++
T Consensus 441 ~~~~~WLe-rGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alT 519 (648)
T COG1505 441 GSRKLWLE-RGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALT 519 (648)
T ss_pred hhhHHHHh-cCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeec
Confidence 99977776 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCC
Q psy4818 588 QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 667 (734)
Q Consensus 588 ~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~ 667 (734)
|+|++|.|+||.+|++||++|+.+.+|..|+.|||+|++++.+..+.+||||+|++. +++|||+||++|.+|+||+|
T Consensus 520 QrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~---g~kYP~~LITTs~~DDRVHP 596 (648)
T COG1505 520 QRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKP---GQKYPPTLITTSLHDDRVHP 596 (648)
T ss_pred cChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCc---cccCCCeEEEcccccccccc
Confidence 999999999999999999999999999999999999999999999999999999998 59999999999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+|++||+++|+++ +.|+.+.+.-++||+...+..+.+++.+.++.||.+.|+
T Consensus 597 aHarKfaa~L~e~-------~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 597 AHARKFAAKLQEV-------GAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred hHHHHHHHHHHhc-------CCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999 899999999999999999888778999999999999885
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=3.1e-52 Score=451.95 Aligned_cols=406 Identities=33% Similarity=0.581 Sum_probs=323.0
Q ss_pred CCCCccCCceeccccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCC-chHHHHHHHHHHhccCCccCCcEEeCC
Q psy4818 23 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNH-TDREAIKEQLLRMANYEKYSAPQRQEN 101 (734)
Q Consensus 23 ~P~~~~~~~~~~~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~~~g~ 101 (734)
||.+++.+++ +++||+++.|||+||||.++|++++||++||+|++++|+++ ++++.|+++|++++..++.+.|...|+
T Consensus 1 P~~~~~~~~~-~~~hg~~~~DpY~WLed~~~~~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~ 79 (414)
T PF02897_consen 1 PPTARKPPVV-ETLHGVTITDPYRWLEDDDSPEVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRGG 79 (414)
T ss_dssp S-TTS-TTSE-EEETTEEEE-TTGGGGSTTSHHHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEETT
T ss_pred CCCCCCCCee-eecCCCEeecCchhhcCCCCHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEECC
Confidence 4555555554 99999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred eEEEEEEcCCCCeeEEEEEeCC--CCC-eEEEeCCCCcCCCC-cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy4818 102 NYFYFHNKGLQNHSILYVQRNL--TGS-TEVFLDPNKLSKDG-TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 177 (734)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~--~g~-~~~l~d~~~~~~~~-~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~ 177 (734)
++||.++.++++++++||+... ++. +++|||+|++++++ ...++.+++||||++|||+.+.+|+|+++|+++|+++
T Consensus 80 ~~y~~~~~~~~~~~~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t 159 (414)
T PF02897_consen 80 YYYYSRNQGGKNYPVLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET 159 (414)
T ss_dssp EEEEEEE-SS-SS-EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTT
T ss_pred eEEEEEEcCCCceEEEEEEecccCCCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCC
Confidence 9999999998999999999877 344 59999999999887 7778899999999999999999999999999999999
Q ss_pred CCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE
Q psy4818 178 GKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV 257 (734)
Q Consensus 178 g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 257 (734)
|+.+.+.+..+.+..++|++||+.|+|++.+..... . +...+.+||+|++|++..++++||+++++..++.++.+
T Consensus 160 g~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~---~--~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~ 234 (414)
T PF02897_consen 160 GKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRT---S--DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSR 234 (414)
T ss_dssp TEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE
T ss_pred CcCcCCcccccccceEEEeCCCCEEEEEEeCccccc---c--cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEe
Confidence 998887777776555999999999999998652110 0 24458899999999999989999999877643778999
Q ss_pred ecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 258 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 258 SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
|+||++|++.+.+....+++|++++.++. .....+..+..........+.+.|+.||+++|.++++++|+.+++++
T Consensus 235 s~d~~~l~i~~~~~~~~s~v~~~d~~~~~----~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~ 310 (414)
T PF02897_consen 235 SKDGRYLFISSSSGTSESEVYLLDLDDGG----SPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLAD 310 (414)
T ss_dssp -TTSSEEEEEEESSSSEEEEEEEECCCTT----TSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTS
T ss_pred cCcccEEEEEEEccccCCeEEEEeccccC----CCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccc
Confidence 99999999988775555899999998731 01234555655555555557777999999999999999999999987
Q ss_pred CCCCCce-EeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEE
Q psy4818 338 PCEKNWK-TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 338 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ 415 (734)
.....|. .++++.+...+..+..++ ++|++....++.++|.++++..++....+..+ .|.+.+++.+++++.++|.+
T Consensus 311 ~~~~~~~~~l~~~~~~~~l~~~~~~~-~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ 389 (414)
T PF02897_consen 311 PSPAEWWTVLIPEDEDVSLEDVSLFK-DYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSY 389 (414)
T ss_dssp TSGGGEEEEEE--SSSEEEEEEEEET-TEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEE
T ss_pred cccccceeEEcCCCCceeEEEEEEEC-CEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEE
Confidence 7643456 666666566788888776 89999999999999999999536666777776 67777888888999999999
Q ss_pred ecCCCCceEEEEeCCCCcCCCCCCceeEEee
Q psy4818 416 TSFLQPGTIYHCNIPENITDQDDFKPTIFRE 446 (734)
Q Consensus 416 ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~ 446 (734)
+|+++|+.+|.||+ +++ +.+++++
T Consensus 390 ss~~~P~~~y~~d~-----~t~--~~~~~k~ 413 (414)
T PF02897_consen 390 SSFTTPPTVYRYDL-----ATG--ELTLLKQ 413 (414)
T ss_dssp EETTEEEEEEEEET-----TTT--CEEEEEE
T ss_pred eCCCCCCEEEEEEC-----CCC--CEEEEEe
Confidence 99999999999999 677 6777664
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-48 Score=432.28 Aligned_cols=570 Identities=18% Similarity=0.223 Sum_probs=383.6
Q ss_pred cCCcE--EeCCeEEEEEEcC----CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCc
Q psy4818 93 YSAPQ--RQENNYFYFHNKG----LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD 166 (734)
Q Consensus 93 ~~~p~--~~g~~~~~~~~~~----~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~ 166 (734)
.+.|. +.|+.++|..... ......+|+.+... +..... ...+..+.|||||+.++|.... +..
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~------~~~~~~----~~~~~~~~~spdg~~~~~~~~~-~~~ 83 (620)
T COG1506 15 VSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT------VRLLTF----GGGVSELRWSPDGSVLAFVSTD-GGR 83 (620)
T ss_pred ccCcccCCCCceeEEeeccccccccccccceEEEeccc------cccccc----CCcccccccCCCCCEEEEEecc-CCC
Confidence 44444 5578888887641 12234556543211 111111 1225678999999999998843 334
Q ss_pred eEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCC-----------ccccc-CCcEEEEEECCC
Q psy4818 167 WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT-----------ETTAH-MGQKIYYHVLGT 234 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~-----------~~~~~-~~~~l~~~~l~t 234 (734)
..++|++++. | .+...... .....|+|+|+.+.+......... ++. ..... ....+++.+.++
T Consensus 84 ~~~l~l~~~~-g-~~~~~~~~--v~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~~ 158 (620)
T COG1506 84 VAQLYLVDVG-G-LITKTAFG--VSDARWSPDGDRIAFLTAEGASKR-DGGDHLFVDRLPVWFDGRGGERSDLYVVDIES 158 (620)
T ss_pred cceEEEEecC-C-ceeeeecc--cccceeCCCCCeEEEEeccccccc-CCceeeeecccceeecCCCCcccceEEEccCc
Confidence 6799999988 5 22222222 367899999999999432211100 110 00011 233455555543
Q ss_pred CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-CC--ceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EE
Q psy4818 235 EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-QG--SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-II 310 (734)
Q Consensus 235 ~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~--~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~ 310 (734)
. .. .+ ......+....++++++.++....... .. ...+++...+ .....+..+...... .+
T Consensus 159 -~-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 223 (620)
T COG1506 159 -K-LI-KL---GLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGN---------GELESLTPGEGSISKLAF 223 (620)
T ss_pred -c-cc-cc---cCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCC---------CceEEEcCCCceeeeeee
Confidence 1 00 11 111223345666777777776655433 11 3333333333 122333333222222 38
Q ss_pred EecCCeEEEEeCCCCC----CceEEEEecCCCCCCCceEeecCCC----CceeEEEEEeeCCEEEEEEEe-CCceeEEEE
Q psy4818 311 ANNGPELIVKTTKNAP----KGKVVTINLNNPCEKNWKTLIPEDE----NRTLDVVAAVANNKLIVHYIQ-NVRSVMDLH 381 (734)
Q Consensus 311 s~dg~~l~~~s~~~~~----~~~l~~~d~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~ 381 (734)
.++|+.+++..+.... ...++.++.+.+. ........+ ...+... .+++.+++.... .+...++..
T Consensus 224 ~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~l~~~ 298 (620)
T COG1506 224 DADGKSIALLGTESDRGLAEGDFILLLDGELGE---VDGDLSSGDDTRGAWAVEGG--LDGDGLLFIATDGGGSSPLFRV 298 (620)
T ss_pred CCCCCeeEEeccCCccCccccceEEEEeccccc---cceeeccCCcccCcHHhccc--cCCCcEEEEEecCCCceEEEEE
Confidence 8999988888765432 2345555522222 111111111 1111111 344667766665 454555555
Q ss_pred ECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCc-eEE
Q psy4818 382 DLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF-QTK 460 (734)
Q Consensus 382 dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 460 (734)
+...+. ...+..+.+.+..++. +++.+++.++++.+|+++|.++. ... .++.. .....+....+ ++|
T Consensus 299 ~~~~~~-~~~~~~~~~~v~~f~~--~~~~~~~~~s~~~~p~~i~~~~~-----~~~---~~~~~-~~~~~~~~~~~~~~e 366 (620)
T COG1506 299 DDLGGG-VEGLSGDDGGVPGFDV--DGRKLALAYSSPTEPPEIYLYDR-----GEE---AKLTS-SNNSGLKKVKLAEPE 366 (620)
T ss_pred eccCCc-eeeecCCCceEEEEee--CCCEEEEEecCCCCccceEEEcC-----CCc---eEEee-cccccccccccCCce
Confidence 442232 2344444577767765 78899999999999999999985 111 22222 12222333333 899
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcc
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 540 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~ 540 (734)
.+++++.||.+|+++++.|.++++.+++|+||++||||.....+.|....+ .|+.+||+|+.+|+|||++||++|.++.
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q-~~~~~G~~V~~~n~RGS~GyG~~F~~~~ 445 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQ-VLASAGYAVLAPNYRGSTGYGREFADAI 445 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhH-HHhcCCeEEEEeCCCCCCccHHHHHHhh
Confidence 999999999999999999999988888999999999998888888887664 4556799999999999999999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccc--
Q psy4818 541 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSE-- 618 (734)
Q Consensus 541 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~-- 618 (734)
.+.++..+++|+++++++|.+.+++|++||+|+|+||||||+++++++.| +|+|+++.++.++++.+........+.
T Consensus 446 ~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (620)
T COG1506 446 RGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDP 524 (620)
T ss_pred hhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCH
Confidence 99999999999999999999999999999999999999999999999987 899999999988887665432222111
Q ss_pred cc-cCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 619 SE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 619 ~~-~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
.+ .+.+.. ..+.+.+.||+.++.+ +++| +||+||++|.|||+.|+++|+++|+.. |+++++++||
T Consensus 525 ~~~~~~~~~--~~~~~~~~sp~~~~~~----i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~-------g~~~~~~~~p 590 (620)
T COG1506 525 EENGGGPPE--DREKYEDRSPIFYADN----IKTP-LLLIHGEEDDRVPIEQAEQLVDALKRK-------GKPVELVVFP 590 (620)
T ss_pred HHhCCCccc--ChHHHHhcChhhhhcc----cCCC-EEEEeecCCccCChHHHHHHHHHHHHc-------CceEEEEEeC
Confidence 11 122221 3456789999999997 8998 999999999999999999999999998 9999999999
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 698 DAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 698 ~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+++|++..+.+ +...+.++++||.++|+.
T Consensus 591 ~e~H~~~~~~~-~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPEN-RVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchh-HHHHHHHHHHHHHHHhcC
Confidence 99999998766 478999999999999874
No 7
>KOG2281|consensus
Probab=100.00 E-value=2e-37 Score=317.31 Aligned_cols=333 Identities=16% Similarity=0.203 Sum_probs=257.3
Q ss_pred EEEEEEEeCCc--eeEEEEECC-CCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCce
Q psy4818 365 KLIVHYIQNVR--SVMDLHDLN-TGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKP 441 (734)
Q Consensus 365 ~l~~~~~~~~~--~~l~~~dl~-~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~ 441 (734)
-+||....++. .+||+..++ .|+. .+++.+ |.-.....+.+-+.++..+++-.+|+.+..|.+. .++ ..
T Consensus 517 LVYf~gt~d~PlE~hLyvvsye~~g~~-~rlt~~-g~sh~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls-----~~~-~~ 588 (867)
T KOG2281|consen 517 LVYFVGTKDTPLEHHLYVVSYENPGEI-ARLTEP-GYSHSCELDQQCDHFVSYYSSVGSPPCVSLYSLS-----WPE-ND 588 (867)
T ss_pred EEEEEccCCCCceeeEEEEEEecCCce-eeccCC-CcccchhhhhhhhhHhhhhhcCCCCceEEEEecc-----CCc-cC
Confidence 35667777764 489999886 5654 677755 2111223344445577778999999999988883 331 01
Q ss_pred eEEeecc-----CC-CCCCCCc-eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-CccccHH---H
Q psy4818 442 TIFRETI-----VP-EFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSIS---R 510 (734)
Q Consensus 442 ~~~~~~~-----~~-~~~~~~~-~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~---~ 510 (734)
.+..+.. +. ...+.+| ..|-+.|.+..|..+.+.+|+|.++++.+++|+++++||||+.+. ...|... .
T Consensus 589 ~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR 668 (867)
T KOG2281|consen 589 PLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR 668 (867)
T ss_pred cccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh
Confidence 1111111 11 1234455 458888999889999999999999999999999999999999874 3445432 3
Q ss_pred HHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcC
Q psy4818 511 CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQR 589 (734)
Q Consensus 511 ~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~ 589 (734)
...|+.+||+|+++|.||+...|..|-...+..+++.+++|.+.++++|+++ |++|++||+|.||||||||++++++++
T Consensus 669 ~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~ 748 (867)
T KOG2281|consen 669 FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY 748 (867)
T ss_pred hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC
Confidence 4678889999999999999999999999999999999999999999999998 599999999999999999999999999
Q ss_pred CCceeEEEEcCCcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCC-cEEEEecCCCCCCCC
Q psy4818 590 PELYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYP-ATLVLTGDHDDRVPP 667 (734)
Q Consensus 590 p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P-~~Li~~g~~D~~v~~ 667 (734)
|++|+++|+++|+++|..+... +.++| |.|++.|. .+.+-|-..++.+. -+-| .+|++||.-|.+|++
T Consensus 749 P~IfrvAIAGapVT~W~~YDTg-----YTERYMg~P~~nE~--gY~agSV~~~Vekl---pdepnRLlLvHGliDENVHF 818 (867)
T KOG2281|consen 749 PNIFRVAIAGAPVTDWRLYDTG-----YTERYMGYPDNNEH--GYGAGSVAGHVEKL---PDEPNRLLLVHGLIDENVHF 818 (867)
T ss_pred cceeeEEeccCcceeeeeeccc-----chhhhcCCCccchh--cccchhHHHHHhhC---CCCCceEEEEecccccchhh
Confidence 9999999999999999876542 34555 77754432 23344555544431 1222 299999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.|...++.+|-++ |+|.++.+||++-|+...+... +..-++++.|+.+
T Consensus 819 ~Hts~Lvs~lvka-------gKpyeL~IfP~ERHsiR~~es~-~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 819 AHTSRLVSALVKA-------GKPYELQIFPNERHSIRNPESG-IYYEARLLHFLQE 866 (867)
T ss_pred hhHHHHHHHHHhC-------CCceEEEEccccccccCCCccc-hhHHHHHHHHHhh
Confidence 9999999999999 9999999999999999887664 6777788999865
No 8
>KOG2100|consensus
Probab=100.00 E-value=2e-33 Score=316.76 Aligned_cols=551 Identities=16% Similarity=0.173 Sum_probs=342.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCC---Cc--eEEEEEEECCCCC-c---ccc-----cccccccCeeEEEcCCcEEEEEEE
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSG---SD--WNTLHIKDVDTGK-D---YPE-----VLKNVKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g---~~--~~~l~v~dl~~g~-~---~~~-----~~~~~~~~~~~wSpDg~~l~y~~~ 207 (734)
..+..+.|||.|+.++|+...+= .. ...+.+..-.... . .++ .... ...+..|||||..++|...
T Consensus 148 ~~~~~~~wsp~~~~l~yv~~~niy~~~~~~~~~~~~~~~~~~~~i~ng~~Dw~yeeEv~~-~~~a~wwsp~g~~la~~~~ 226 (755)
T KOG2100|consen 148 SKIQYASWSPLGNDLAYVLHNNIYYQSSEEDEDVRIVSNGGEDVIFNGKPDWIYEEEVLS-SDSAIWWSPDGDRLAYASF 226 (755)
T ss_pred CeeEEEEEcCCCCEEEEEEecccccccCcCCCceEEEecCCCceEEcCCCCceeehhhcc-cCccceeCCCCceeEEEEe
Confidence 34688999999999999986320 00 0111121111110 0 011 0111 1256789999999999988
Q ss_pred ecCCCCC-------CC--Ccc----------cccCCcEEEEEECCCCCCCC-eeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy4818 208 CDINGTA-------DG--TET----------TAHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVS 267 (734)
Q Consensus 208 ~~~~~~~-------~~--~~~----------~~~~~~~l~~~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~ 267 (734)
++..... +. ... ..+-...+++.+........ ..-...+....+.....|..+.+.++..
T Consensus 227 ~dt~V~~~~~~~~~~~~~yp~~~~~~ypk~g~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 306 (755)
T KOG2100|consen 227 NDTKVETINLPGYTDDDQYPKSTNFHYPKAGAPNPAVSLFVVDLHDPPRLGIPPPTNQRSGEYYVTNVKWDTTEKVLVVW 306 (755)
T ss_pred cccccceEEeccccccccCcccceeecCCCCCCCCeEEEEEEeCCCceeeccCCccccccCceEEEEEEEecCccEEEEE
Confidence 6643210 00 000 00111233333322111000 0000011122345567788777776666
Q ss_pred EecCCCCceEEEEeCCCCCCCcc-cC-CCC-ceeeeccccceEEEEEecCC-eEEEEeCCCCCCceEEEEecCCCCCCCc
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGKI-SG-KFP-LKTVIPGMDHHHEIIANNGP-ELIVKTTKNAPKGKVVTINLNNPCEKNW 343 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~l-~~-~~~-~~~l~~~~~~~~~~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 343 (734)
..+......+-++|.. +.+... .. ... |. .. ......++.|+. .+++.....++...+..+....+. ..
T Consensus 307 ~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~---~~-~~~~~~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~--~~ 379 (755)
T KOG2100|consen 307 TNREQNISVETLCDTP-GICRVVYEESSDGGWV---EH-QNVEPVFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGS--EP 379 (755)
T ss_pred EccCCCeeeeEEecCc-ccceeeEecccccccc---cc-ccccceEeecCCceeEEEeeccCCEEEEEEEEcCCCC--cc
Confidence 6554444455555554 111100 00 000 11 10 111123666763 445545444433345555554442 12
Q ss_pred eEeecCCCCceeEEEEE-eeCCEEEEEEEeC--CceeEEEEECCCCceeeeeCCC----CceEEeeccCcccceEEEEEe
Q psy4818 344 KTLIPEDENRTLDVVAA-VANNKLIVHYIQN--VRSVMDLHDLNTGKRLHSFPLD----LGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 344 ~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~--~~~~l~~~dl~~g~~~~~l~~~----~g~v~~~~~~~d~~~l~~~~s 416 (734)
..++.+. +.+...... .+.+.+++..... +..+|+.+++.++.. ..++.. .+.+.+++++...+.+++.++
T Consensus 380 ~~lt~g~-w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~~ 457 (755)
T KOG2100|consen 380 RMLTSGN-WEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGTV-ESLTCSLITGPCTYLSVSFSKSAKYYVLSCS 457 (755)
T ss_pred ccccccc-eEEEEeccccCCCceEEEEecCCCCCceEEEEEEcccccc-ccccccCCCCcceEEEEecCCcccEEEEEcc
Confidence 3344443 444322222 2446788887775 345788888865543 334432 334556677766777888888
Q ss_pred cCCCCceEEEEeCCCCcCCCCCCceeEEeecc-CC-CCC---CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEE
Q psy4818 417 SFLQPGTIYHCNIPENITDQDDFKPTIFRETI-VP-EFE---PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVI 491 (734)
Q Consensus 417 s~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~v 491 (734)
.+..|.. .+...+. ...+ ....|.... +. .+. ......+.+.+ ||....+.++.|+++.+.+++|+|
T Consensus 458 gP~~p~~--~~~~~~~--~~~~-~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPll 529 (755)
T KOG2100|consen 458 GPKVPDG--QLTRHSS--KNSK-TIVVLETNEELKKTIENVALPIVEFGKIEI---DGITANAILILPPNFDPSKKYPLL 529 (755)
T ss_pred CCCCCcc--eeecccc--ccce-EEEEeccChhhHHHhhcccCCcceeEEEEe---ccEEEEEEEecCCCCCCCCCCCEE
Confidence 8887743 2222100 1110 122222211 11 111 11223333433 888999999999999888999999
Q ss_pred EEecCCCCCcC-CccccHHHH-HHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 492 IYGYGGYGVSV-LPTFSISRC-MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 492 v~~hGg~~~~~-~~~~~~~~~-~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
|.+||||++.. ...|...+. ..+..+|++|+.+|+||+|++|.++..+..+..|..+++|++.+++++++.+++|++|
T Consensus 530 v~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~r 609 (755)
T KOG2100|consen 530 VVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSR 609 (755)
T ss_pred EEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHH
Confidence 99999998543 233333332 3466789999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcChHHHHHHHHHhcCC-CceeEEEEcCCcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCC
Q psy4818 570 ITIMGGSNGGLLVGACLNQRP-ELYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPN 647 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p-~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~ 647 (734)
|+|+|+|+|||+++.++...| +.|+|+++.+|++|+. ++... +.++| |.|..... .+.+.++..++..
T Consensus 610 i~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~----~terymg~p~~~~~--~y~e~~~~~~~~~--- 679 (755)
T KOG2100|consen 610 VAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDST----YTERYMGLPSENDK--GYEESSVSSPANN--- 679 (755)
T ss_pred eEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccc----ccHhhcCCCccccc--hhhhccccchhhh---
Confidence 999999999999999999987 7999999999999999 44322 34555 66654332 2556677776665
Q ss_pred CccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 648 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 648 ~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++.|.+|++||+.|++|+++|+.+++++|+.+ |+++.+.+||+++|++...... ...+..+..||..+++.
T Consensus 680 -~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~-------gv~~~~~vypde~H~is~~~~~-~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 680 -IKTPKLLLIHGTEDDNVHFQQSAILIKALQNA-------GVPFRLLVYPDENHGISYVEVI-SHLYEKLDRFLRDCFGS 750 (755)
T ss_pred -hccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC-------CCceEEEEeCCCCcccccccch-HHHHHHHHHHHHHHcCc
Confidence 66676899999999999999999999999999 9999999999999999876543 57778899999988775
Q ss_pred CC
Q psy4818 728 KY 729 (734)
Q Consensus 728 ~~ 729 (734)
..
T Consensus 751 ~~ 752 (755)
T KOG2100|consen 751 PV 752 (755)
T ss_pred cc
Confidence 54
No 9
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=1e-33 Score=277.69 Aligned_cols=209 Identities=33% Similarity=0.512 Sum_probs=172.4
Q ss_pred ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHH
Q psy4818 504 PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 583 (734)
Q Consensus 504 ~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~ 583 (734)
|+|+. ..++|+++||+|+.+|+||+++||.+|+..+...++..+++|+++++++|++++.+|++||+|+|+|+||++++
T Consensus 1 ~~f~~-~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 1 PSFNW-NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp ---SH-HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHH
T ss_pred CeeeH-HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccc
Confidence 45664 45788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeEEEEcCCcchhccccccc--cCcccccccCCCC-CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecC
Q psy4818 584 ACLNQRPELYGAALILVGALDMLRFNKFT--IAYYSESEFGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD 660 (734)
Q Consensus 584 ~~~~~~p~~~~a~v~~~~~~d~~~~~~~~--~~~~~~~~~g~~~-~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~ 660 (734)
++++++|++|+++|+.+|++|+..+...+ ....+..+++.+. .++.+..+..++++.++. ++ ||+||+||+
T Consensus 80 ~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-----~~-~P~li~hG~ 153 (213)
T PF00326_consen 80 LAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQ-----IK-PPVLIIHGE 153 (213)
T ss_dssp HHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG-----GG-SEEEEEEET
T ss_pred hhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhcccccccccc-----CC-CCEEEEccC
Confidence 99999999999999999999998876543 2222345567763 455555555555555522 22 349999999
Q ss_pred CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 661 HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 661 ~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+|.+||+.++.+++++|++. |++++++++|++||++..+.+. .+...++++||.++|+.
T Consensus 154 ~D~~Vp~~~s~~~~~~L~~~-------g~~~~~~~~p~~gH~~~~~~~~-~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 154 NDPRVPPSQSLRLYNALRKA-------GKPVELLIFPGEGHGFGNPENR-RDWYERILDFFDKYLKK 212 (213)
T ss_dssp TBSSSTTHHHHHHHHHHHHT-------TSSEEEEEETT-SSSTTSHHHH-HHHHHHHHHHHHHHTT-
T ss_pred CCCccCHHHHHHHHHHHHhc-------CCCEEEEEcCcCCCCCCCchhH-HHHHHHHHHHHHHHcCC
Confidence 99999999999999999999 9999999999999999888775 58999999999999975
No 10
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.88 E-value=6.4e-21 Score=207.77 Aligned_cols=298 Identities=11% Similarity=0.104 Sum_probs=210.0
Q ss_pred hhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcE
Q psy4818 63 QNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTT 142 (734)
Q Consensus 63 q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~ 142 (734)
|+.++++|+...+.++.+..++...+.....+.|...+++++|++..+.+.+..||+++..++..+.|++.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~------ 191 (417)
T TIGR02800 118 LQLLGKQYTVTASQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREP------ 191 (417)
T ss_pred EEeeeeeEEcCHHHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCc------
Confidence 66677788877788888999999888877778888889999999887656678899998777778888886532
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..+.|||||++|||....++. .+|+++|+++|+.............+.|||||+.|+|+....
T Consensus 192 -~~~p~~Spdg~~la~~~~~~~~--~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~------------- 255 (417)
T TIGR02800 192 -ILSPAWSPDGQKLAYVSFESGK--PEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKD------------- 255 (417)
T ss_pred -eecccCCCCCCEEEEEEcCCCC--cEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCC-------------
Confidence 5678999999999999876544 789999999987533222222225689999999999986422
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
...+||+++++++...++. .. ......+.|+|||++|++.+.+.. ...||++++.++. ...+...
T Consensus 256 ~~~~i~~~d~~~~~~~~l~--~~---~~~~~~~~~s~dg~~l~~~s~~~g-~~~iy~~d~~~~~---------~~~l~~~ 320 (417)
T TIGR02800 256 GNPDIYVMDLDGKQLTRLT--NG---PGIDTEPSWSPDGKSIAFTSDRGG-SPQIYMMDADGGE---------VRRLTFR 320 (417)
T ss_pred CCccEEEEECCCCCEEECC--CC---CCCCCCEEECCCCCEEEEEECCCC-CceEEEEECCCCC---------EEEeecC
Confidence 2347999999887543222 11 112345789999999999876533 3589999998732 2333322
Q ss_pred ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
...... .|+|||+.|++.+... +.++|+.++++++. ..++.... ........++++.+++....++...++++
T Consensus 321 ~~~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~----~~~l~~~~-~~~~p~~spdg~~l~~~~~~~~~~~l~~~ 394 (417)
T TIGR02800 321 GGYNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG----ERVLTDTG-LDESPSFAPNGRMILYATTRGGRGVLGLV 394 (417)
T ss_pred CCCccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC----eEEccCCC-CCCCceECCCCCEEEEEEeCCCcEEEEEE
Confidence 222222 4999999988877653 56789999998754 33444331 12222333466788888888888889998
Q ss_pred ECCCCceeeeeCCCCceEEeecc
Q psy4818 382 DLNTGKRLHSFPLDLGQITHISG 404 (734)
Q Consensus 382 dl~~g~~~~~l~~~~g~v~~~~~ 404 (734)
+. +|+..+.++.+.+.+..+++
T Consensus 395 ~~-~g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 395 ST-DGRFRARLPLGNGDVREPAW 416 (417)
T ss_pred EC-CCceeeECCCCCCCcCCCCC
Confidence 87 67766777766565544443
No 11
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=7.3e-20 Score=196.91 Aligned_cols=288 Identities=9% Similarity=0.033 Sum_probs=184.4
Q ss_pred HHHHHHHhccCCccCCcEEeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcE
Q psy4818 80 IKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKH 155 (734)
Q Consensus 80 l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~ 155 (734)
+..++...+...-...|..-+.++.|+....+. ....||+++..++..+.|+..... ...++|||||+.
T Consensus 126 ~~h~~~D~~~~~~tg~~g~~~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~-------~~sP~wSPDG~~ 198 (428)
T PRK01029 126 KIHEAADTIHYALTGVPGISSGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSL-------SITPTWMHIGSG 198 (428)
T ss_pred HHHHHHHHHHHHHcCCCccccCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCC-------cccceEccCCCc
Confidence 445555555544444455558899999875432 256899999888888888764422 467999999988
Q ss_pred --EEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEE--E
Q psy4818 156 --FAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH--V 231 (734)
Q Consensus 156 --la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 231 (734)
++|.+..+|. .+||++++.+|+....+........+.|||||++|+|+.... ....+|++ +
T Consensus 199 ~~~~y~S~~~g~--~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~-------------g~~di~~~~~~ 263 (428)
T PRK01029 199 FPYLYVSYKLGV--PKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRY-------------GNPDLFIQSFS 263 (428)
T ss_pred eEEEEEEccCCC--ceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCC-------------CCcceeEEEee
Confidence 5567776664 799999999998654443222235799999999999998521 12246654 4
Q ss_pred CCCCC-CCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc-eEEE
Q psy4818 232 LGTEQ-DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEI 309 (734)
Q Consensus 232 l~t~~-~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~-~~~~ 309 (734)
+.++. .+...+.... ......+.|||||++|+|.+.+. ...+||++++.... ...+.++..... ....
T Consensus 264 ~~~g~~g~~~~lt~~~--~~~~~~p~wSPDG~~Laf~s~~~-g~~~ly~~~~~~~g-------~~~~~lt~~~~~~~~p~ 333 (428)
T PRK01029 264 LETGAIGKPRRLLNEA--FGTQGNPSFSPDGTRLVFVSNKD-GRPRIYIMQIDPEG-------QSPRLLTKKYRNSSCPA 333 (428)
T ss_pred cccCCCCcceEeecCC--CCCcCCeEECCCCCEEEEEECCC-CCceEEEEECcccc-------cceEEeccCCCCcccee
Confidence 43321 1222333321 11234689999999999987653 33689999886411 112333332222 2234
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
|||||++|+|.+...+ ..+|+++|+++++ .+.++... .. .....+ ++++.|++.....+...|+++|+.+++.
T Consensus 334 wSPDG~~Laf~~~~~g-~~~I~v~dl~~g~---~~~Lt~~~-~~-~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~ 407 (428)
T PRK01029 334 WSPDGKKIAFCSVIKG-VRQICVYDLATGR---DYQLTTSP-EN-KESPSWAIDSLHLVYSAGNSNESELYLISLITKKT 407 (428)
T ss_pred ECCCCCEEEEEEcCCC-CcEEEEEECCCCC---eEEccCCC-CC-ccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 9999999999987654 5679999998876 45555432 22 223334 4556788877777778999999966654
Q ss_pred eeeeCCCCceEEeeccCc
Q psy4818 389 LHSFPLDLGQITHISGRR 406 (734)
Q Consensus 389 ~~~l~~~~g~v~~~~~~~ 406 (734)
+.|+...+.+....++|
T Consensus 408 -~~Lt~~~g~~~~p~Ws~ 424 (428)
T PRK01029 408 -RKIVIGSGEKRFPSWGA 424 (428)
T ss_pred -EEeecCCCcccCceecC
Confidence 55654445444455554
No 12
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=1.3e-19 Score=196.64 Aligned_cols=262 Identities=13% Similarity=0.108 Sum_probs=177.5
Q ss_pred CeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 101 NNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 101 ~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
.++.|+.... .+....||+.+..+...++|+..+. .+..+.|||||++|+|+...+|. .+||++|+.+|+
T Consensus 183 ~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~-------~~~~p~wSPDG~~La~~s~~~g~--~~L~~~dl~tg~ 253 (448)
T PRK04792 183 TRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPE-------PLMSPAWSPDGRKLAYVSFENRK--AEIFVQDIYTQV 253 (448)
T ss_pred CEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCC-------cccCceECCCCCEEEEEEecCCC--cEEEEEECCCCC
Confidence 4566665543 3335688888876666777776542 36789999999999999876553 789999999988
Q ss_pred cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec
Q psy4818 180 DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD 259 (734)
Q Consensus 180 ~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp 259 (734)
....+........++|||||+.|+|+...+ ...+||++++.++..+. +... ......+.|||
T Consensus 254 ~~~lt~~~g~~~~~~wSPDG~~La~~~~~~-------------g~~~Iy~~dl~tg~~~~--lt~~---~~~~~~p~wSp 315 (448)
T PRK04792 254 REKVTSFPGINGAPRFSPDGKKLALVLSKD-------------GQPEIYVVDIATKALTR--ITRH---RAIDTEPSWHP 315 (448)
T ss_pred eEEecCCCCCcCCeeECCCCCEEEEEEeCC-------------CCeEEEEEECCCCCeEE--CccC---CCCccceEECC
Confidence 543332222225789999999999987532 24589999998765332 2221 22345689999
Q ss_pred CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc-cceEEEEEecCCeEEEEeCCCCCCceEEEEecCCC
Q psy4818 260 CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP 338 (734)
Q Consensus 260 DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 338 (734)
||++|+|...+.. ..+||++|++++. ...++... ......|+|||+.|+|.+... ..++|+++|++++
T Consensus 316 DG~~I~f~s~~~g-~~~Iy~~dl~~g~---------~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~-g~~~I~~~dl~~g 384 (448)
T PRK04792 316 DGKSLIFTSERGG-KPQIYRVNLASGK---------VSRLTFEGEQNLGGSITPDGRSMIMVNRTN-GKFNIARQDLETG 384 (448)
T ss_pred CCCEEEEEECCCC-CceEEEEECCCCC---------EEEEecCCCCCcCeeECCCCCEEEEEEecC-CceEEEEEECCCC
Confidence 9999999876533 3799999998732 23333211 111234999999999987653 4568999999887
Q ss_pred CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 339 CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
. .+.++... .. ......++++.+++....++...|+++++ +|+..+.++.+.+.+...+++|
T Consensus 385 ~---~~~lt~~~-~d-~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 385 A---MQVLTSTR-LD-ESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred C---eEEccCCC-CC-CCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 6 34444332 11 11223456678888888888889999998 6877677876656555555554
No 13
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=1.8e-20 Score=186.16 Aligned_cols=217 Identities=11% Similarity=0.102 Sum_probs=151.9
Q ss_pred EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccC-CCCCchhhhccc
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWHNAGR 541 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~~~~~~~~ 541 (734)
.+.+.||.++.+|+..|++. ..++.++||++||-.+.. .+...++.+|+++||+|+.+|+||+ |+.+.++.....
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~---~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 13 VICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM---DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred eEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh---HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 36678999999999999752 246778999999954432 2234567888899999999999886 666655543221
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc-----c
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY-----Y 616 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-----~ 616 (734)
. ....|+.++++|+.++ +.++|+++|+|+||.++..++...+ .+++|+.+|+.++..+....... .
T Consensus 89 s----~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~l~d~l~~~~~~~~~~~p 159 (307)
T PRK13604 89 S----IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEID--LSFLITAVGVVNLRDTLERALGYDYLSLP 159 (307)
T ss_pred c----ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCcccHHHHHHHhhhcccccCc
Confidence 1 1268999999999876 3468999999999999877776433 79999999999966443211111 0
Q ss_pred c--ccc---c-CCCC-CHHHHHHHHh------CCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q psy4818 617 S--ESE---F-GSPN-NKTHFHNLLS------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 683 (734)
Q Consensus 617 ~--~~~---~-g~~~-~~~~~~~~~~------~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~ 683 (734)
+ ..+ + |.+- ....+....+ .+|+..++. ++.| +|++||..|..||+.++.+++++++..
T Consensus 160 ~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~----l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s~--- 231 (307)
T PRK13604 160 IDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKG----LDIP-FIAFTANNDSWVKQSEVIDLLDSIRSE--- 231 (307)
T ss_pred ccccccccccccccccHHHHHHHHHhcCccccccHHHHHhh----cCCC-EEEEEcCCCCccCHHHHHHHHHHhccC---
Confidence 0 000 1 1111 1122222222 234455554 6677 999999999999999999999987533
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCc
Q psy4818 684 LPYQKNPLLLRVEQDAGHGQGTP 706 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~gH~~~~~ 706 (734)
+.+++.++|++|.+...
T Consensus 232 ------~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 232 ------QCKLYSLIGSSHDLGEN 248 (307)
T ss_pred ------CcEEEEeCCCccccCcc
Confidence 56899999999999864
No 14
>PLN02442 S-formylglutathione hydrolase
Probab=99.86 E-value=2.2e-20 Score=190.32 Aligned_cols=248 Identities=12% Similarity=0.066 Sum_probs=159.6
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCC------
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG------ 530 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~------ 530 (734)
..+.+++.|. -|..+++.+|+|+. .+.+++|+|+++||+.+....+.+......+++..|++|++||..++|
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCc-ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 4666666663 56789999999984 345689999999997765543333333456777789999999976543
Q ss_pred ------CCCchhhhcc-ccccCCCchhH-HHHH-HHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 531 ------ELGEDWHNAG-RLLKKQNCFDD-FQAA-AEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 531 ------~~g~~~~~~~-~~~~~~~~~~D-~~~~-~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
++|..|+... ...++...+.+ +... .+++.+. ..+|+++++|+|+|+||++++.++.++|++|+++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 175 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFA 175 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEEC
Confidence 1122222111 11111111222 2222 2222222 23689999999999999999999999999999999999
Q ss_pred CcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCCh-HHHHHHHHHHh
Q psy4818 601 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-HSYKFIATLQE 679 (734)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~-~~~~~~~~L~~ 679 (734)
|+.++.... .. .......+|.+. +..+.+...+|+.++.. .+.| +||+||++|..|+.. ++..++++|++
T Consensus 176 ~~~~~~~~~-~~-~~~~~~~~g~~~--~~~~~~d~~~~~~~~~~----~~~p-vli~~G~~D~~v~~~~~s~~~~~~l~~ 246 (283)
T PLN02442 176 PIANPINCP-WG-QKAFTNYLGSDK--ADWEEYDATELVSKFND----VSAT-ILIDQGEADKFLKEQLLPENFEEACKE 246 (283)
T ss_pred CccCcccCc-hh-hHHHHHHcCCCh--hhHHHcChhhhhhhccc----cCCC-EEEEECCCCccccccccHHHHHHHHHH
Confidence 998754211 00 001112234432 22333333444445433 4555 999999999999974 68999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
. |.+++++++|+++|.+. ....+..+.+.|..++++
T Consensus 247 ~-------g~~~~~~~~pg~~H~~~----~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 247 A-------GAPVTLRLQPGYDHSYF----FIATFIDDHINHHAQALK 282 (283)
T ss_pred c-------CCCeEEEEeCCCCccHH----HHHHHHHHHHHHHHHHhc
Confidence 8 88999999999999875 123334445666666553
No 15
>PRK10566 esterase; Provisional
Probab=99.86 E-value=1.5e-20 Score=189.47 Aligned_cols=228 Identities=16% Similarity=0.167 Sum_probs=148.0
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC-Cchhhhcccc--ccCCC
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL-GEDWHNAGRL--LKKQN 547 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~-g~~~~~~~~~--~~~~~ 547 (734)
.+....+.|.+ ..+++.|+||++||..+... .|. .+...|+++||.|+++|+||+|.. +..-...... .....
T Consensus 11 ~~~~~~~~p~~-~~~~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 11 GIEVLHAFPAG-QRDTPLPTVFFYHGFTSSKL--VYS-YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CcceEEEcCCC-CCCCCCCEEEEeCCCCcccc--hHH-HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHH
Confidence 45667777764 22356899999999755442 233 345677778999999999996532 1100000000 00113
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEE-cCCcchhccccccccCcccccccCCCCC
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI-LVGALDMLRFNKFTIAYYSESEFGSPNN 626 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~-~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 626 (734)
..+|+.++++++.+++.+|++||+++|+|+||++++.++.++|++.++++. ..+.........+ ..... ..+..
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~ 161 (249)
T PRK10566 87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLF--PPLIP---ETAAQ 161 (249)
T ss_pred HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhc--ccccc---ccccc
Confidence 467888889999988889999999999999999999999988876444332 2332221100000 00000 00111
Q ss_pred ----HHHHHHHHhCCccCCCCCCCCCc-cCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC--cEEEEEeCCC
Q psy4818 627 ----KTHFHNLLSYSPLHNIKVPPNNT-QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN--PLLLRVEQDA 699 (734)
Q Consensus 627 ----~~~~~~~~~~sp~~~~~~p~~~~-~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~--~~~~~~~~~~ 699 (734)
.+.+..+..+++...+.. + +.| +|++||++|..||+.++.+++++|+.+ |. .+.+.+|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~----i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~~~~~~ 229 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQ----LADRP-LLLWHGLADDVVPAAESLRLQQALRER-------GLDKNLTCLWEPGV 229 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhh----cCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhc-------CCCcceEEEecCCC
Confidence 111222344555444443 3 466 999999999999999999999999887 65 4788999999
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 700 GHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 700 gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
||.+.. +....+.+||.++|
T Consensus 230 ~H~~~~------~~~~~~~~fl~~~~ 249 (249)
T PRK10566 230 RHRITP------EALDAGVAFFRQHL 249 (249)
T ss_pred CCccCH------HHHHHHHHHHHhhC
Confidence 999752 34677899999875
No 16
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=4.5e-19 Score=191.69 Aligned_cols=263 Identities=14% Similarity=0.088 Sum_probs=177.5
Q ss_pred CCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy4818 100 ENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 178 (734)
Q Consensus 100 g~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g 178 (734)
..+++|+.... ++..+.||+.+..++..+.++.... .+..++|||||++|||.+..+|. .+|+++|+.+|
T Consensus 163 ~~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~~~~p~wSPDG~~la~~s~~~g~--~~i~i~dl~~G 233 (429)
T PRK03629 163 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-------PLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 233 (429)
T ss_pred CCeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCC-------ceeeeEEcCCCCEEEEEEecCCC--cEEEEEECCCC
Confidence 35677887643 3446789999877777777776432 36789999999999999865553 68999999999
Q ss_pred CcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEe
Q psy4818 179 KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 258 (734)
Q Consensus 179 ~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S 258 (734)
+....+........+.|||||+.|+|+.... ...+||++++.++... .+... ......+.||
T Consensus 234 ~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~-------------g~~~I~~~d~~tg~~~--~lt~~---~~~~~~~~wS 295 (429)
T PRK03629 234 AVRQVASFPRHNGAPAFSPDGSKLAFALSKT-------------GSLNLYVMDLASGQIR--QVTDG---RSNNTEPTWF 295 (429)
T ss_pred CeEEccCCCCCcCCeEECCCCCEEEEEEcCC-------------CCcEEEEEECCCCCEE--EccCC---CCCcCceEEC
Confidence 7543332222235799999999999986421 2347999999876432 22222 2234578999
Q ss_pred cCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccce-EEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 259 DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 259 pDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
|||++|+|.+.+.. ..+||+++++++. ...+....... ...|+|||+.|+|.+...+ ...|+.+|+++
T Consensus 296 PDG~~I~f~s~~~g-~~~Iy~~d~~~g~---------~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g-~~~I~~~dl~~ 364 (429)
T PRK03629 296 PDSQNLAYTSDQAG-RPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLAT 364 (429)
T ss_pred CCCCEEEEEeCCCC-CceEEEEECCCCC---------eEEeecCCCCccCEEECCCCCEEEEEEccCC-CceEEEEECCC
Confidence 99999999876532 3689999998732 23333221111 2349999999999887644 45799999987
Q ss_pred CCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 338 PCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
+. ++.|+... ........+++..+++...+.+...|+++++ +|+..+.|+...+.+..++++|
T Consensus 365 g~---~~~Lt~~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 365 GG---VQVLTDTF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CC---eEEeCCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 76 45555332 1112223355566777777666678999999 6776677765556665666654
No 17
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=3.3e-19 Score=194.03 Aligned_cols=261 Identities=10% Similarity=0.086 Sum_probs=173.6
Q ss_pred CCeEEEEEEcCCCC--eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy4818 100 ENNYFYFHNKGLQN--HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 177 (734)
Q Consensus 100 g~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~ 177 (734)
..+++|+.+.+++. ...||+.+..+...+.|+..+. .+..++|||||++|||....+|. .+||++|+.+
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~~ 235 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSS-------LVLTPRFSPNRQEITYMSYANGR--PRVYLLDLET 235 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCC-------CeEeeEECCCCCEEEEEEecCCC--CEEEEEECCC
Confidence 45788888765432 5689998876777777776442 36789999999999999876654 7899999999
Q ss_pred CCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE
Q psy4818 178 GKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV 257 (734)
Q Consensus 178 g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 257 (734)
|+....+........+.|||||+.|+|+.... ...+||++++.++... .+.. .......+.|
T Consensus 236 g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~-------------g~~~Iy~~d~~~~~~~--~Lt~---~~~~~~~~~~ 297 (435)
T PRK05137 236 GQRELVGNFPGMTFAPRFSPDGRKVVMSLSQG-------------GNTDIYTMDLRSGTTT--RLTD---SPAIDTSPSY 297 (435)
T ss_pred CcEEEeecCCCcccCcEECCCCCEEEEEEecC-------------CCceEEEEECCCCceE--EccC---CCCccCceeE
Confidence 98644332222236789999999999987532 2457999999876532 2222 2223456899
Q ss_pred ecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc-eEEEEEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 258 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 258 SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
||||++|+|.+.+. ...+||++|++++. .+.++..... ....|+|||+.|+|.+... ..++|++++++
T Consensus 298 spDG~~i~f~s~~~-g~~~Iy~~d~~g~~---------~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~-~~~~i~~~d~~ 366 (435)
T PRK05137 298 SPDGSQIVFESDRS-GSPQLYVMNADGSN---------PRRISFGGGRYSTPVWSPRGDLIAFTKQGG-GQFSIGVMKPD 366 (435)
T ss_pred cCCCCEEEEEECCC-CCCeEEEEECCCCC---------eEEeecCCCcccCeEECCCCCEEEEEEcCC-CceEEEEEECC
Confidence 99999999987543 33689999998732 2334332211 1224999999999988643 35689999987
Q ss_pred CCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCCc---eeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 337 NPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVR---SVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~---~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
++. .+.+ ... .. .....+ ++++.|++.....+. ..|+++++. |...+.++. .+.+....++|
T Consensus 367 ~~~---~~~l-t~~-~~-~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~-g~~~~~l~~-~~~~~~p~Wsp 432 (435)
T PRK05137 367 GSG---ERIL-TSG-FL-VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT-GRNEREVPT-PGDASDPAWSP 432 (435)
T ss_pred CCc---eEec-cCC-CC-CCCCeECCCCCEEEEEEccCCCCCcceEEEEECC-CCceEEccC-CCCccCcccCC
Confidence 654 2333 332 11 223333 455677777765554 589999995 444466653 34444455543
No 18
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.85 E-value=9.4e-20 Score=185.44 Aligned_cols=246 Identities=14% Similarity=0.070 Sum_probs=162.8
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--ccCCCCC-
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELG- 533 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~~~~g- 533 (734)
..+.+.+.+. -+.++++.++.|++.. .++.|+|+++||..+....+.+......++++.|++|++||. ||.+..|
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 4555666664 5667889999998743 356899999999876555444333344566667999999997 6654322
Q ss_pred ---------chhhhccc-cccC-C-CchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 534 ---------EDWHNAGR-LLKK-Q-NCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 534 ---------~~~~~~~~-~~~~-~-~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
..|+.... ..+. . ...+.+...+..+++. .-+|++|++|+|+||||++++.++.++|++|+++++.+
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 12221110 0011 1 1123334455555554 34788999999999999999999999999999999999
Q ss_pred CcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCC-hHHHHHHHHHHh
Q psy4818 601 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP-LHSYKFIATLQE 679 (734)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~-~~~~~~~~~L~~ 679 (734)
|+.+..... .. ...+...++.+. + .+..++|...+... ...||+||.||+.|+.|+. .++..+.++|++
T Consensus 171 ~~~~~~~~~-~~-~~~~~~~l~~~~--~---~~~~~~~~~~~~~~---~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~ 240 (275)
T TIGR02821 171 PIVAPSRCP-WG-QKAFSAYLGADE--A---AWRSYDASLLVADG---GRHSTILIDQGTADQFLDEQLRPDAFEQACRA 240 (275)
T ss_pred CccCcccCc-ch-HHHHHHHhcccc--c---chhhcchHHHHhhc---ccCCCeeEeecCCCcccCccccHHHHHHHHHH
Confidence 998754211 00 001111123221 1 12234554443321 2235599999999999999 688999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+ |.++++.++|+++|+|..- .....+.+.|+.+++
T Consensus 241 ~-------g~~v~~~~~~g~~H~f~~~----~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 241 A-------GQALTLRRQAGYDHSYYFI----ASFIADHLRHHAERL 275 (275)
T ss_pred c-------CCCeEEEEeCCCCccchhH----HHhHHHHHHHHHhhC
Confidence 8 9999999999999999632 344556678877654
No 19
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=8.2e-19 Score=191.36 Aligned_cols=264 Identities=15% Similarity=0.148 Sum_probs=176.9
Q ss_pred eCCeEEEEEEcC--CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 99 QENNYFYFHNKG--LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 99 ~g~~~~~~~~~~--~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
-..+++|+.... ++....|+..+..++..+.++.... .+..++|||||++|||....++ ..+||++|++
T Consensus 161 f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~-------~~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l~ 231 (430)
T PRK00178 161 FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSRE-------PILSPRWSPDGKRIAYVSFEQK--RPRIFVQNLD 231 (430)
T ss_pred ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCC-------ceeeeeECCCCCEEEEEEcCCC--CCEEEEEECC
Confidence 344677766532 2345678888876666666665432 2678999999999999987654 3689999999
Q ss_pred CCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEE
Q psy4818 177 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 256 (734)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 256 (734)
+|+....+........+.|||||+.|+|+.... ...+||++++.++... .+... ......+.
T Consensus 232 ~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~-------------g~~~Iy~~d~~~~~~~--~lt~~---~~~~~~~~ 293 (430)
T PRK00178 232 TGRREQITNFEGLNGAPAWSPDGSKLAFVLSKD-------------GNPEIYVMDLASRQLS--RVTNH---PAIDTEPF 293 (430)
T ss_pred CCCEEEccCCCCCcCCeEECCCCCEEEEEEccC-------------CCceEEEEECCCCCeE--EcccC---CCCcCCeE
Confidence 997544332222235799999999999987532 2358999999876532 22221 22334689
Q ss_pred EecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc-eEEEEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 257 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 257 ~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
|||||++|+|.+.+. ...+||++++.++. ...++..... ....|+|||+.|+|.+..++ .+.|+++|+
T Consensus 294 ~spDg~~i~f~s~~~-g~~~iy~~d~~~g~---------~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~-~~~l~~~dl 362 (430)
T PRK00178 294 WGKDGRTLYFTSDRG-GKPQIYKVNVNGGR---------AERVTFVGNYNARPRLSADGKTLVMVHRQDG-NFHVAAQDL 362 (430)
T ss_pred ECCCCCEEEEEECCC-CCceEEEEECCCCC---------EEEeecCCCCccceEECCCCCEEEEEEccCC-ceEEEEEEC
Confidence 999999999987543 33689999998742 2333322111 22349999999999887544 567999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
+++. .+.++... ... .....++++.+++....++...|+++++ +|...+.++.+.+.+...++++
T Consensus 363 ~tg~---~~~lt~~~-~~~-~p~~spdg~~i~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 363 QRGS---VRILTDTS-LDE-SPSVAPNGTMLIYATRQQGRGVLMLVSI-NGRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred CCCC---EEEccCCC-CCC-CceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 8876 35554432 211 2233356577888887778889999999 5665567765556665555554
No 20
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=7.5e-19 Score=190.27 Aligned_cols=260 Identities=13% Similarity=0.096 Sum_probs=174.3
Q ss_pred CeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc
Q psy4818 101 NNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 180 (734)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~ 180 (734)
++++|.....+ ...||+.+..+...+.++..+. .+..++|||||++|||.+..++. .+||++|+.+|+.
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~-------~v~~p~wSPDG~~la~~s~~~~~--~~I~~~dl~~g~~ 232 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPE-------PIISPAWSPDGTKLAYVSFESKK--PVVYVHDLATGRR 232 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCC-------CcccceEcCCCCEEEEEEccCCC--cEEEEEECCCCCE
Confidence 56777764432 4678988876556666665432 25789999999999999876543 6899999999976
Q ss_pred ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC
Q psy4818 181 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 260 (734)
Q Consensus 181 ~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 260 (734)
...+........++|||||+.|+|+...+ ...+||.+++.++... .+.. +......+.||||
T Consensus 233 ~~l~~~~g~~~~~~~SPDG~~la~~~~~~-------------g~~~Iy~~d~~~~~~~--~lt~---~~~~~~~~~wSpD 294 (427)
T PRK02889 233 RVVANFKGSNSAPAWSPDGRTLAVALSRD-------------GNSQIYTVNADGSGLR--RLTQ---SSGIDTEPFFSPD 294 (427)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEccC-------------CCceEEEEECCCCCcE--ECCC---CCCCCcCeEEcCC
Confidence 44332222236799999999999986532 2458999998765432 2222 1223346889999
Q ss_pred CcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccce-EEEEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 261 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 261 G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
|++|+|.+.+. ...+||.++++++. .+.++...... ...|||||++|+|.++..+ .+.|+++|++++.
T Consensus 295 G~~l~f~s~~~-g~~~Iy~~~~~~g~---------~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g-~~~I~v~d~~~g~ 363 (427)
T PRK02889 295 GRSIYFTSDRG-GAPQIYRMPASGGA---------AQRVTFTGSYNTSPRISPDGKLLAYISRVGG-AFKLYVQDLATGQ 363 (427)
T ss_pred CCEEEEEecCC-CCcEEEEEECCCCc---------eEEEecCCCCcCceEECCCCCEEEEEEccCC-cEEEEEEECCCCC
Confidence 99999976543 33689999987732 22333211111 2349999999999887643 4679999998765
Q ss_pred CCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 340 EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
.+.++... .. ....+.++++.|++.....+...|+.+++ +|+..+.+..+.|.+...+++|
T Consensus 364 ---~~~lt~~~-~~-~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 364 ---VTALTDTT-RD-ESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred ---eEEccCCC-Cc-cCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCC
Confidence 35554432 11 11223345567888888888889999999 6877677766666666666664
No 21
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=9.4e-19 Score=186.84 Aligned_cols=253 Identities=11% Similarity=0.115 Sum_probs=171.0
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcE-EEEEEeCCCCceEEEEEEECCCCCc
Q psy4818 102 NYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKH-FAYCLSKSGSDWNTLHIKDVDTGKD 180 (734)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~-la~~~~~~g~~~~~l~v~dl~~g~~ 180 (734)
..|+++..+. ....||+++..+...++++... ....+.|||||++ ++|++..++. .+||++|+.+|+.
T Consensus 157 ~~~v~~~~~~-~~~~l~~~d~dg~~~~~~~~~~--------~~~~p~wSpDG~~~i~y~s~~~~~--~~Iyv~dl~tg~~ 225 (419)
T PRK04043 157 KVVFSKYTGP-KKSNIVLADYTLTYQKVIVKGG--------LNIFPKWANKEQTAFYYTSYGERK--PTLYKYNLYTGKK 225 (419)
T ss_pred EEEEEEccCC-CcceEEEECCCCCceeEEccCC--------CeEeEEECCCCCcEEEEEEccCCC--CEEEEEECCCCcE
Confidence 4555554442 3578999998777677666532 2457999999997 6666654333 5999999999986
Q ss_pred ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC
Q psy4818 181 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 260 (734)
Q Consensus 181 ~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 260 (734)
...+........+.|||||+.|+|+.... ...+||++++.++... .+...+ .....+.||||
T Consensus 226 ~~lt~~~g~~~~~~~SPDG~~la~~~~~~-------------g~~~Iy~~dl~~g~~~--~LT~~~---~~d~~p~~SPD 287 (419)
T PRK04043 226 EKIASSQGMLVVSDVSKDGSKLLLTMAPK-------------GQPDIYLYDTNTKTLT--QITNYP---GIDVNGNFVED 287 (419)
T ss_pred EEEecCCCcEEeeEECCCCCEEEEEEccC-------------CCcEEEEEECCCCcEE--EcccCC---CccCccEECCC
Confidence 55443322224689999999999987532 2458999999876532 233222 12346799999
Q ss_pred CcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCC-----CCceEEEEec
Q psy4818 261 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNA-----PKGKVVTINL 335 (734)
Q Consensus 261 G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~-----~~~~l~~~d~ 335 (734)
|++|+|.+.+. ...+||++|++++.. ++++..... ...|||||+.|+|.+.... ..++|+++|+
T Consensus 288 G~~I~F~Sdr~-g~~~Iy~~dl~~g~~---------~rlt~~g~~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~ 356 (419)
T PRK04043 288 DKRIVFVSDRL-GYPNIFMKKLNSGSV---------EQVVFHGKN-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLIST 356 (419)
T ss_pred CCEEEEEECCC-CCceEEEEECCCCCe---------EeCccCCCc-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEEC
Confidence 99999998763 347999999998432 233321111 1249999999999987542 2368999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEE
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQIT 400 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~ 400 (734)
+++. ++.|+...... ...+.++++.+++.....+...|+.+++ +|...+.++...|.+.
T Consensus 357 ~~g~---~~~LT~~~~~~--~p~~SPDG~~I~f~~~~~~~~~L~~~~l-~g~~~~~l~~~~g~~~ 415 (419)
T PRK04043 357 NSDY---IRRLTANGVNQ--FPRFSSDGGSIMFIKYLGNQSALGIIRL-NYNKSFLFPLKVGKIQ 415 (419)
T ss_pred CCCC---eEECCCCCCcC--CeEECCCCCEEEEEEccCCcEEEEEEec-CCCeeEEeecCCCccC
Confidence 8876 46666543221 2233456677888887777788999999 6765566765445543
No 22
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=1.5e-18 Score=188.58 Aligned_cols=264 Identities=13% Similarity=0.109 Sum_probs=175.6
Q ss_pred eCCeEEEEEEcC--CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 99 QENNYFYFHNKG--LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 99 ~g~~~~~~~~~~--~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
-+.+++|+...+ +.....||+.+..++..+.|+... ..+..++|||||++|||.....+. .+||++|+.
T Consensus 166 f~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~-------~~v~~p~wSpDg~~la~~s~~~~~--~~l~~~dl~ 236 (433)
T PRK04922 166 FWTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSA-------EPILSPAWSPDGKKLAYVSFERGR--SAIYVQDLA 236 (433)
T ss_pred ccceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCC-------CccccccCCCCCCEEEEEecCCCC--cEEEEEECC
Confidence 345678877643 233567898887666667776533 236789999999999999876543 789999999
Q ss_pred CCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEE
Q psy4818 177 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 256 (734)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 256 (734)
+|+....+........+.|||||+.|+|+...+ ...+||++++.++... .+... ......+.
T Consensus 237 ~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~-------------g~~~Iy~~d~~~g~~~--~lt~~---~~~~~~~~ 298 (433)
T PRK04922 237 TGQRELVASFRGINGAPSFSPDGRRLALTLSRD-------------GNPEIYVMDLGSRQLT--RLTNH---FGIDTEPT 298 (433)
T ss_pred CCCEEEeccCCCCccCceECCCCCEEEEEEeCC-------------CCceEEEEECCCCCeE--ECccC---CCCccceE
Confidence 988644332222235789999999999987532 2357999999876532 22221 22334689
Q ss_pred EecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc-eEEEEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 257 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 257 ~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
|||||++|+|.+.+.. ..+||++++.++. ...++..... ....|||||+.|+|.+.. ...++|+.+++
T Consensus 299 ~spDG~~l~f~sd~~g-~~~iy~~dl~~g~---------~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~-~~~~~I~v~d~ 367 (433)
T PRK04922 299 WAPDGKSIYFTSDRGG-RPQIYRVAASGGS---------AERLTFQGNYNARASVSPDGKKIAMVHGS-GGQYRIAVMDL 367 (433)
T ss_pred ECCCCCEEEEEECCCC-CceEEEEECCCCC---------eEEeecCCCCccCEEECCCCCEEEEEECC-CCceeEEEEEC
Confidence 9999999999875533 3689999998732 2333321111 123499999999998764 34568999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
+++. .+.++... . .......++++.+++.....+...|+++++ +|...++++.+.+.+..++++|
T Consensus 368 ~~g~---~~~Lt~~~-~-~~~p~~spdG~~i~~~s~~~g~~~L~~~~~-~g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 368 STGS---VRTLTPGS-L-DESPSFAPNGSMVLYATREGGRGVLAAVST-DGRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCCC---eEECCCCC-C-CCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEcccCCCCCCCCccCC
Confidence 8765 35454332 1 112223345567888877777889999999 5666677765555554555543
No 23
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=6.8e-19 Score=182.55 Aligned_cols=238 Identities=13% Similarity=0.051 Sum_probs=162.0
Q ss_pred ceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 457 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 457 ~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
...+.+.+++.+| .|++.+|+|.. ...|+|||+|||...... ..+...+..+....|+.|+.+|||.+++.-
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-- 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-- 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC--
Confidence 3577888888887 59999999963 346999999998644332 233333333333359999999999876531
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcchhc
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDML 606 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~ 606 (734)
....++|+.++++|+.++ .-+|++||+|+|+|+||.+++.++.+. +..++++|+.+|++|+.
T Consensus 128 ---------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 128 ---------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred ---------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 223578999999999764 236999999999999999999988642 35688999999998863
Q ss_pred cccccccCcccccccCCC---CCHHHHHHHH---------hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHH
Q psy4818 607 RFNKFTIAYYSESEFGSP---NNKTHFHNLL---------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 674 (734)
Q Consensus 607 ~~~~~~~~~~~~~~~g~~---~~~~~~~~~~---------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~ 674 (734)
.... + ..++.. ...+.++++. ..+|+.......-....||+||++|+.|+.+ .++..|+
T Consensus 199 ~~~s------~-~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~ 269 (318)
T PRK10162 199 DSVS------R-RLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLY 269 (318)
T ss_pred CChh------H-HHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHH
Confidence 2110 0 011100 0111111111 1233322110000024678999999999865 6899999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcC
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 726 (734)
++|+++ |++++++++++..|+|... .....+.+.++.+||.++|+
T Consensus 270 ~~L~~a-------Gv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 270 QTLAAH-------QQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHc-------CCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999 9999999999999998532 22234667778899998875
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=1.2e-18 Score=183.16 Aligned_cols=257 Identities=14% Similarity=0.076 Sum_probs=165.8
Q ss_pred CCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 453 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 453 ~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
.+..+..+...+.+.||.+|.+..+.|.+. ....|+||++||.... ..+.|.. +...|+++||.|+++|+||.|..
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~-~~~~~~~-~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGND-ISWTFQS-TAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCC-cceehhH-HHHHHHhCCCEEEEecCCCCCCC
Confidence 445566677778889999999988887642 2457899999997433 2333332 34556667999999999997643
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 612 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 612 (734)
.. ..+....-....+|+.+++++|......+..+++|+|||+||.+++.++.++|++++++|+.+|+.++.......
T Consensus 102 ~~---~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EG---LRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CC---ccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 21 111001112236788889998876543444579999999999999999999999999999999876533211000
Q ss_pred --------cCccccccc-CCC---------CCHHHHHHHHhCCcc----------------------CCCCCCCCCccCC
Q psy4818 613 --------IAYYSESEF-GSP---------NNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYP 652 (734)
Q Consensus 613 --------~~~~~~~~~-g~~---------~~~~~~~~~~~~sp~----------------------~~~~~p~~~~~~P 652 (734)
....+.... ..+ ... ....+...+|. .++.. ++.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P 253 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVP-AKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKD----VSIP 253 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCH-HHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhh----cCCC
Confidence 000000000 000 000 00111111221 11222 6677
Q ss_pred cEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC--chHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 653 ATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT--PLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 653 ~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
+||+||++|..||+.++.+++++++.. ..++++++++||.... +..........+.+||.++++....
T Consensus 254 -vLii~G~~D~ivp~~~~~~l~~~i~~~---------~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~ 323 (330)
T PLN02298 254 -FIVLHGSADVVTDPDVSRALYEEAKSE---------DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKAT 323 (330)
T ss_pred -EEEEecCCCCCCCHHHHHHHHHHhccC---------CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999998887532 3578899999998753 3222245667789999999987655
Q ss_pred C
Q psy4818 731 P 731 (734)
Q Consensus 731 ~ 731 (734)
|
T Consensus 324 ~ 324 (330)
T PLN02298 324 P 324 (330)
T ss_pred C
Confidence 5
No 25
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.82 E-value=7e-19 Score=187.98 Aligned_cols=238 Identities=14% Similarity=0.051 Sum_probs=156.1
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
.+..+.+.++..||..|+++++.|+. +++.|+||+ |||.++.....|.. +...|+++||+|+++|+||.|+...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli-~gG~~~~~~~~~~~-~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLV-CGGLDSLQTDYYRL-FRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEE-eCCcccchhhhHHH-HHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 44688999998888889999999973 467888776 45555433333332 4566777899999999999664321
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc--c-c
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--F-T 612 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~--~-~ 612 (734)
+. ..........+++++|.+...+|++||+++|+|+||++++.++..+|++++++|+..|+++...... . .
T Consensus 239 ~~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 10 0111112235788999888889999999999999999999999988999999999998875221110 0 0
Q ss_pred cCc----ccccccCCCC-CH-HHHHHHHhCCccC--CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 613 IAY----YSESEFGSPN-NK-THFHNLLSYSPLH--NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 613 ~~~----~~~~~~g~~~-~~-~~~~~~~~~sp~~--~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
... .+...+|.+. +. .....+..++.-. .+.. +++.| +|+++|++|++||++++..+.+...
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~---~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~------ 382 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGR---RCPTP-MLSGYWKNDPFSPEEDSRLIASSSA------ 382 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhcc---CCCCc-EEEEecCCCCCCCHHHHHHHHHhCC------
Confidence 000 0111233322 21 2222333333211 1111 26777 9999999999999999886655433
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 685 PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
..+++++|++ |.+.. ..+....+.+||.++|
T Consensus 383 -----~~~l~~i~~~-~~~e~----~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 383 -----DGKLLEIPFK-PVYRN----FDKALQEISDWLEDRL 413 (414)
T ss_pred -----CCeEEEccCC-CccCC----HHHHHHHHHHHHHHHh
Confidence 3367888887 43332 2466777899999886
No 26
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=5.9e-18 Score=180.75 Aligned_cols=206 Identities=14% Similarity=0.141 Sum_probs=149.4
Q ss_pred cCCcEEeCCe-EEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEE
Q psy4818 93 YSAPQRQENN-YFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 171 (734)
Q Consensus 93 ~~~p~~~g~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~ 171 (734)
.+.|+|||++ +||..+.++. +.||+.+..+++.+.|++.... ...+.|||||++|+|+.+..|+ .+||
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~~--~~Iyv~dl~tg~~~~lt~~~g~-------~~~~~~SPDG~~la~~~~~~g~--~~Iy 260 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGERK--PTLYKYNLYTGKKEKIASSQGM-------LVVSDVSKDGSKLLLTMAPKGQ--PDIY 260 (419)
T ss_pred eEEECCCCCcEEEEEEccCCC--CEEEEEECCCCcEEEEecCCCc-------EEeeEECCCCCEEEEEEccCCC--cEEE
Confidence 4666799996 7887776433 5799999888888888764321 3568899999999999987664 7999
Q ss_pred EEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCee
Q psy4818 172 IKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL 251 (734)
Q Consensus 172 v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~ 251 (734)
++|+++|+..+.+........+.|||||++|+|++... ...+||++++.++..+. +.+.. . +
T Consensus 261 ~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~-------------g~~~Iy~~dl~~g~~~r-lt~~g-~---~ 322 (419)
T PRK04043 261 LYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRL-------------GYPNIFMKKLNSGSVEQ-VVFHG-K---N 322 (419)
T ss_pred EEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCC-------------CCceEEEEECCCCCeEe-CccCC-C---c
Confidence 99999998655554433235789999999999998632 23589999998876432 22221 1 1
Q ss_pred EEEEEEecCCcEEEEEEecCC-----CCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCC
Q psy4818 252 GLHSEVTDCGRYLLVSTSNNT-----QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAP 326 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~~~~-----~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~ 326 (734)
...|||||++|++...... ...+||++|++++. .+.|+.........|+|||+.|+|.++. +.
T Consensus 323 --~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---------~~~LT~~~~~~~p~~SPDG~~I~f~~~~-~~ 390 (419)
T PRK04043 323 --NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY---------IRRLTANGVNQFPRFSSDGGSIMFIKYL-GN 390 (419)
T ss_pred --CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC---------eEECCCCCCcCCeEECCCCCEEEEEEcc-CC
Confidence 2589999999999876532 12689999998843 3444433222224599999999999886 44
Q ss_pred CceEEEEecCCCC
Q psy4818 327 KGKVVTINLNNPC 339 (734)
Q Consensus 327 ~~~l~~~d~~~~~ 339 (734)
...|+.+++++..
T Consensus 391 ~~~L~~~~l~g~~ 403 (419)
T PRK04043 391 QSALGIIRLNYNK 403 (419)
T ss_pred cEEEEEEecCCCe
Confidence 6679999998764
No 27
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.79 E-value=3.6e-19 Score=175.06 Aligned_cols=205 Identities=21% Similarity=0.270 Sum_probs=140.4
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCC-CCchhhhc--ccccc----
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE-LGEDWHNA--GRLLK---- 544 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~-~g~~~~~~--~~~~~---- 544 (734)
|.+++..|++ .++.|.||++|+.+|.. .+...++..|+++||.|++||+-++.. ......+. .....
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~~G~~---~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDIFGLN---PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BTTBS----HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCCCCCc---hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 5789999987 26899999999988766 233345677888999999999876555 11111111 00000
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCC
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 624 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~ 624 (734)
.....+|+.+++++|.++..++++||+++|+|+||.+++.++.+. +.++++|+..|... +
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------------------~ 134 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-------------------P 134 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS-------------------G
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC-------------------C
Confidence 123457888999999998878999999999999999999999876 57899999888000 0
Q ss_pred CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 625 NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 625 ~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
.. +...... ++.| +|+++|++|+.++.++..++.++|++. +.++++++|++++|+|.
T Consensus 135 ~~-----------~~~~~~~----~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 135 PP-----------PLEDAPK----IKAP-VLILFGENDPFFPPEEVEALEEALKAA-------GVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp GG-----------HHHHGGG------S--EEEEEETT-TTS-HHHHHHHHHHHHCT-------TTTEEEEEETT--TTTT
T ss_pred Cc-----------chhhhcc----cCCC-EeecCccCCCCCChHHHHHHHHHHHhc-------CCcEEEEECCCCccccc
Confidence 00 0000111 4555 999999999999999999999999988 89999999999999997
Q ss_pred Cch------HHhHHHHHHHHHHHHHHc
Q psy4818 705 TPL------MKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 705 ~~~------~~~~~~~~~~~~fl~~~l 725 (734)
... ....+.+.++++||.++|
T Consensus 192 ~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 192 NPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp STTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 432 223567788999998876
No 28
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.79 E-value=1.5e-18 Score=177.33 Aligned_cols=244 Identities=22% Similarity=0.231 Sum_probs=156.0
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
...+.+..+.|.+.+|..|.++++.|++. .++.|+||.+||..+....+ . .... ++.+||+|+.+|.||-|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~~~--~-~~~~-~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSGDP--F-DLLP-WAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--GGGH--H-HHHH-HHHTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCCCCc--c-cccc-cccCCeEEEEecCCCCCCCC
Confidence 35668899999999999999999999953 58999999999864442221 1 1223 45579999999999976443
Q ss_pred chhhh-----------ccccccC-----CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEE
Q psy4818 534 EDWHN-----------AGRLLKK-----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAAL 597 (734)
Q Consensus 534 ~~~~~-----------~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v 597 (734)
.+... .+..... ...+.|.+.++++|.+...+|++||+++|.|.||.+++++++..| ++++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 33221 1111101 123689999999999999999999999999999999999999987 579999
Q ss_pred EcCCcc-hhcccccccc-Ccccc--ccc---CCC--C-CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCC
Q psy4818 598 ILVGAL-DMLRFNKFTI-AYYSE--SEF---GSP--N-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 667 (734)
Q Consensus 598 ~~~~~~-d~~~~~~~~~-~~~~~--~~~---g~~--~-~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~ 667 (734)
+.+|++ |+........ ...|. ..| ..+ . .++.++.|.=++....++. +++| +|+..|..|+.|||
T Consensus 204 ~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~r----i~~p-vl~~~gl~D~~cPP 278 (320)
T PF05448_consen 204 ADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARR----IKCP-VLFSVGLQDPVCPP 278 (320)
T ss_dssp EESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG------SE-EEEEEETT-SSS-H
T ss_pred ecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHH----cCCC-EEEEEecCCCCCCc
Confidence 999954 5444332221 11110 111 112 2 2344555554555555554 8888 99999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
.-....+++|. .+.++.+||..||...... ...+.+.||.+|
T Consensus 279 ~t~fA~yN~i~----------~~K~l~vyp~~~He~~~~~-----~~~~~~~~l~~~ 320 (320)
T PF05448_consen 279 STQFAAYNAIP----------GPKELVVYPEYGHEYGPEF-----QEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHHHCC------------SSEEEEEETT--SSTTHHH-----HHHHHHHHHHH-
T ss_pred hhHHHHHhccC----------CCeeEEeccCcCCCchhhH-----HHHHHHHHHhcC
Confidence 99888888774 3579999999999875322 234568898875
No 29
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.79 E-value=2.4e-18 Score=168.12 Aligned_cols=195 Identities=11% Similarity=0.109 Sum_probs=131.1
Q ss_pred EEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc--hhhhccccccCCCchhH
Q psy4818 474 MYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE--DWHNAGRLLKKQNCFDD 551 (734)
Q Consensus 474 ~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~--~~~~~~~~~~~~~~~~D 551 (734)
+++|.|++. +++.|+||++||+.+..........+..++.+.||+|++||+||++..+. .|..............|
T Consensus 1 ~~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 1 MYVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CEEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 468889874 46799999999987654322211124566667899999999999765443 33333222223456788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHH
Q psy4818 552 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFH 631 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~ 631 (734)
+...++++.++..+|++||+|+|+|+||++++.++.++|++|+++++.++..-.... . ..... .....+.....+.
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~-~--~~~~~-~~~~~~~~~~~~~ 154 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS-S--SISAT-PQMCTAATAASVC 154 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc-c--chhhH-hhcCCCCCHHHHH
Confidence 889999999887799999999999999999999999999999999888875421110 0 00000 1111112222222
Q ss_pred HH-HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q psy4818 632 NL-LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 681 (734)
Q Consensus 632 ~~-~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~ 681 (734)
.+ .... .... ...|+++|+||.+|.+||+..+.+++++|++.+
T Consensus 155 ~~~~~~~--~~~~-----~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~ 198 (212)
T TIGR01840 155 RLVRGMQ--SEYN-----GPTPIMSVVHGDADYTVLPGNADEIRDAMLKVY 198 (212)
T ss_pred HHHhccC--Cccc-----CCCCeEEEEEcCCCceeCcchHHHHHHHHHHhc
Confidence 22 2111 1111 345668999999999999999999999999884
No 30
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=2.5e-17 Score=179.30 Aligned_cols=242 Identities=11% Similarity=0.098 Sum_probs=166.2
Q ss_pred CcEEEEEEeCCCCc--eEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEE
Q psy4818 153 GKHFAYCLSKSGSD--WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 230 (734)
Q Consensus 153 G~~la~~~~~~g~~--~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (734)
..+|||+...+|++ ..+||++|.+++.....+........+.|||||+.|+|++... ...+||++
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~-------------g~~~i~~~ 231 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN-------------GRPRVYLL 231 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC-------------CCCEEEEE
Confidence 56899998876633 5799999998776554444433346899999999999998632 23589999
Q ss_pred ECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE-EE
Q psy4818 231 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EI 309 (734)
Q Consensus 231 ~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~-~~ 309 (734)
++.++... .+... .+....+.|||||+.|++..... ...+||++|++++. ...++....... ..
T Consensus 232 dl~~g~~~--~l~~~---~g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~Lt~~~~~~~~~~ 296 (435)
T PRK05137 232 DLETGQRE--LVGNF---PGMTFAPRFSPDGRKVVMSLSQG-GNTDIYTMDLRSGT---------TTRLTDSPAIDTSPS 296 (435)
T ss_pred ECCCCcEE--EeecC---CCcccCcEECCCCCEEEEEEecC-CCceEEEEECCCCc---------eEEccCCCCccCcee
Confidence 99877532 23222 22345789999999999887543 34789999998843 233433222222 34
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCcee
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~ 389 (734)
|+|||++|+|.+++.+ ..+||++|++++. .+.++... .........++++.|++.....+...|+++++.++. .
T Consensus 297 ~spDG~~i~f~s~~~g-~~~Iy~~d~~g~~---~~~lt~~~-~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~ 370 (435)
T PRK05137 297 YSPDGSQIVFESDRSG-SPQLYVMNADGSN---PRRISFGG-GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-E 370 (435)
T ss_pred EcCCCCEEEEEECCCC-CCeEEEEECCCCC---eEEeecCC-CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-e
Confidence 9999999999998754 4579999998765 45565443 222222334566777777765666789999995444 4
Q ss_pred eeeCCCCceEEeeccCcccceEEEEEecCCCC--ceEEEEeC
Q psy4818 390 HSFPLDLGQITHISGRRKYNEVFYGFTSFLQP--GTIYHCNI 429 (734)
Q Consensus 390 ~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P--~~~~~~d~ 429 (734)
+.++.. ..+..++++||++.+++........ ..+|.+|+
T Consensus 371 ~~lt~~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 371 RILTSG-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred EeccCC-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 566543 2355678899999998877655443 57999999
No 31
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=4.3e-17 Score=175.51 Aligned_cols=252 Identities=14% Similarity=0.141 Sum_probs=166.3
Q ss_pred eEEeCCCCcEEEEEEeCCCCc----eEEEEEEECCCCCcccccccccccCeeEEEcCCcE--EEEEEEecCCCCCCCCcc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSD----WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKG--FFYNQYCDINGTADGTET 219 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~----~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~--l~y~~~~~~~~~~~~~~~ 219 (734)
...++ +++|||+....+.+ .+.||++|.+++...+.+........+.|||||++ |+|++...
T Consensus 141 ~~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~---------- 208 (428)
T PRK01029 141 VPGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL---------- 208 (428)
T ss_pred CCccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC----------
Confidence 35555 99999998765422 46899999999887665554443468999999988 55676532
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEE--eCCCCCCCcccCCCCce
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYF--DLHSLPDGKISGKFPLK 297 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~--d~~~~~~~~l~~~~~~~ 297 (734)
...+||+++++++... .+...+. ....+.|||||++|+|...... ..++|+. ++.++.. ...+
T Consensus 209 ---g~~~I~~~~l~~g~~~--~lt~~~g---~~~~p~wSPDG~~Laf~s~~~g-~~di~~~~~~~~~g~~------g~~~ 273 (428)
T PRK01029 209 ---GVPKIFLGSLENPAGK--KILALQG---NQLMPTFSPRKKLLAFISDRYG-NPDLFIQSFSLETGAI------GKPR 273 (428)
T ss_pred ---CCceEEEEECCCCCce--EeecCCC---CccceEECCCCCEEEEEECCCC-CcceeEEEeecccCCC------Ccce
Confidence 2358999999987644 3333222 2346899999999999875432 3467774 5554211 1233
Q ss_pred eeecccc-c-eEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIPGMD-H-HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~~~~-~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.++.+.. . ....|||||++|+|.+++++ ..+||.+++++... ..+.++... .........++++.|++....++.
T Consensus 274 ~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g-~~~ly~~~~~~~g~-~~~~lt~~~-~~~~~p~wSPDG~~Laf~~~~~g~ 350 (428)
T PRK01029 274 RLLNEAFGTQGNPSFSPDGTRLVFVSNKDG-RPRIYIMQIDPEGQ-SPRLLTKKY-RNSSCPAWSPDGKKIAFCSVIKGV 350 (428)
T ss_pred EeecCCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECccccc-ceEEeccCC-CCccceeECCCCCEEEEEEcCCCC
Confidence 4443321 2 12349999999999998754 45799998853210 124444433 222233344666788888777777
Q ss_pred eeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+|+++|+.+|+. +.++...+.+..+.+++|++.+++..... ....+|.+|+
T Consensus 351 ~~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl 402 (428)
T PRK01029 351 RQICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISL 402 (428)
T ss_pred cEEEEEECCCCCe-EEccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEEC
Confidence 8999999987765 56664434455678899999888876543 3467999999
No 32
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=8e-17 Score=174.72 Aligned_cols=277 Identities=13% Similarity=0.068 Sum_probs=174.3
Q ss_pred HHHHHHHhccCCccCCcEEeCCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEE
Q psy4818 80 IKEQLLRMANYEKYSAPQRQENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAY 158 (734)
Q Consensus 80 l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~ 158 (734)
+..++...+.+.-...+-.-+.+++|+..+. +.....||+.+..+...++|+..+ ..+..++|||||++|||
T Consensus 148 ~ah~~~d~i~~~ltg~~g~f~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~-------~~v~~p~wSPDG~~la~ 220 (429)
T PRK01742 148 GAHTVSDEVFEKLTAIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSS-------QPLMSPAWSPDGSKLAY 220 (429)
T ss_pred HHHHHHHHHHHHHcCCCCccCCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCC-------CccccceEcCCCCEEEE
Confidence 3344444433333333445567888887653 233478888887666666665533 23678999999999999
Q ss_pred EEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC
Q psy4818 159 CLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK 238 (734)
Q Consensus 159 ~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~ 238 (734)
+...++ ..+||++|+.+|+.............++|||||+.|+|+...+ ...+||.+++.++...
T Consensus 221 ~s~~~~--~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~-------------g~~~Iy~~d~~~~~~~ 285 (429)
T PRK01742 221 VSFENK--KSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKD-------------GVLNIYVMGANGGTPS 285 (429)
T ss_pred EEecCC--CcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecC-------------CcEEEEEEECCCCCeE
Confidence 886543 4789999999987433221111225799999999999987422 2347999998765422
Q ss_pred CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEE
Q psy4818 239 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELI 318 (734)
Q Consensus 239 ~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~ 318 (734)
.+.. +......+.|||||++|++.+.+. ...+||.++..++. .. ++.... ....|+|||+.|+
T Consensus 286 --~lt~---~~~~~~~~~wSpDG~~i~f~s~~~-g~~~I~~~~~~~~~---------~~-~l~~~~-~~~~~SpDG~~ia 348 (429)
T PRK01742 286 --QLTS---GAGNNTEPSWSPDGQSILFTSDRS-GSPQVYRMSASGGG---------AS-LVGGRG-YSAQISADGKTLV 348 (429)
T ss_pred --eecc---CCCCcCCEEECCCCCEEEEEECCC-CCceEEEEECCCCC---------eE-EecCCC-CCccCCCCCCEEE
Confidence 2222 222345789999999999987543 33689999887621 11 222111 1123999999998
Q ss_pred EEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCce
Q psy4818 319 VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQ 398 (734)
Q Consensus 319 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~ 398 (734)
+.+. ..++.+|+.++. ++.++...... .....++++.+++...+++...++++++ +|+.+++|+...+.
T Consensus 349 ~~~~-----~~i~~~Dl~~g~---~~~lt~~~~~~--~~~~sPdG~~i~~~s~~g~~~~l~~~~~-~G~~~~~l~~~~g~ 417 (429)
T PRK01742 349 MING-----DNVVKQDLTSGS---TEVLSSTFLDE--SPSISPNGIMIIYSSTQGLGKVLQLVSA-DGRFKARLPGSDGQ 417 (429)
T ss_pred EEcC-----CCEEEEECCCCC---eEEecCCCCCC--CceECCCCCEEEEEEcCCCceEEEEEEC-CCCceEEccCCCCC
Confidence 8754 248889998765 34444332111 1122345456666665555556777777 78877888765566
Q ss_pred EEeeccCc
Q psy4818 399 ITHISGRR 406 (734)
Q Consensus 399 v~~~~~~~ 406 (734)
+..++++|
T Consensus 418 ~~~p~wsp 425 (429)
T PRK01742 418 VKFPAWSP 425 (429)
T ss_pred CCCcccCC
Confidence 65666665
No 33
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=1.8e-17 Score=162.44 Aligned_cols=216 Identities=20% Similarity=0.261 Sum_probs=163.8
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh-h
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH-N 538 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~-~ 538 (734)
+.+.+++.| .++++++.+|++ .++.|+||.+|+-+|... +...+...|+.+||+|++||+-+..+...... .
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~---~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNP---HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCch---HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 456677766 789999999987 345599999999877654 33346678888999999999966322222211 1
Q ss_pred cccccc-------CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc
Q psy4818 539 AGRLLK-------KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF 611 (734)
Q Consensus 539 ~~~~~~-------~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 611 (734)
...... ......|+.++++||..+..++++||+++|+|+||.+++.++.+.| .++|+|+..|..-..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~----- 149 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD----- 149 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-----
Confidence 101111 1456789999999999998899999999999999999999999877 679999988743100
Q ss_pred ccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcE
Q psy4818 612 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 691 (734)
Q Consensus 612 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~ 691 (734)
. + ....+ +++| +|+..|+.|..+|.....++.++|.++ ++.+
T Consensus 150 -----~--------------------~-~~~~~----~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~-------~~~~ 191 (236)
T COG0412 150 -----D--------------------T-ADAPK----IKVP-VLLHLAGEDPYIPAADVDALAAALEDA-------GVKV 191 (236)
T ss_pred -----c--------------------c-ccccc----ccCc-EEEEecccCCCCChhHHHHHHHHHHhc-------CCCe
Confidence 0 0 00112 5666 999999999999999999999999988 7889
Q ss_pred EEEEeCCCCCCCCCch---------HHhHHHHHHHHHHHHHHcC
Q psy4818 692 LLRVEQDAGHGQGTPL---------MKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 692 ~~~~~~~~gH~~~~~~---------~~~~~~~~~~~~fl~~~l~ 726 (734)
.+.+|+++.|+|.... ....+.++++++||.++++
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999997431 2235678889999999886
No 34
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.77 E-value=1.3e-17 Score=156.26 Aligned_cols=246 Identities=18% Similarity=0.184 Sum_probs=166.4
Q ss_pred CCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCC
Q psy4818 452 FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE 531 (734)
Q Consensus 452 ~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~ 531 (734)
+.....++-+++|++.+|.+|.+|+++|+.. .++.|+||..||-.+....+ ..++.|-+ .||+|+.+|.||-|+
T Consensus 49 ~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~~---~~~l~wa~-~Gyavf~MdvRGQg~ 122 (321)
T COG3458 49 FTLPRVEVYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGEW---HDMLHWAV-AGYAVFVMDVRGQGS 122 (321)
T ss_pred ccCCceEEEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCCCc---cccccccc-cceeEEEEecccCCC
Confidence 3344567889999999999999999999863 48999999999854444322 12344544 699999999999655
Q ss_pred CCc------------hhhhccccccC-----CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCcee
Q psy4818 532 LGE------------DWHNAGRLLKK-----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYG 594 (734)
Q Consensus 532 ~g~------------~~~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~ 594 (734)
+-. .|.-.|..+.+ ...+.|...+++-|.+...+|++||++.|+|.||.+++++++..| +.+
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 521 12222222211 245899999999999999999999999999999999999999987 679
Q ss_pred EEEEcCCcch-hccccccccCccc------ccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCC
Q psy4818 595 AALILVGALD-MLRFNKFTIAYYS------ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 667 (734)
Q Consensus 595 a~v~~~~~~d-~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~ 667 (734)
++++.+|++. ..+.........+ ..... |...+.++.|.-++- .|... +++.| +|+..|..|++|||
T Consensus 202 ~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~-~~e~~v~~TL~yfD~-~n~A~---RiK~p-vL~svgL~D~vcpP 275 (321)
T COG3458 202 AVVADYPFLSDFPRAIELATEGPYDEIQTYFKRHD-PKEAEVFETLSYFDI-VNLAA---RIKVP-VLMSVGLMDPVCPP 275 (321)
T ss_pred cccccccccccchhheeecccCcHHHHHHHHHhcC-chHHHHHHHHhhhhh-hhHHH---hhccc-eEEeecccCCCCCC
Confidence 9999999864 2222221111111 11112 223334443332222 23333 37888 99999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.-...++++|.. +.++.+||.-+|....... ..+++.|+....
T Consensus 276 stqFA~yN~l~~----------~K~i~iy~~~aHe~~p~~~-----~~~~~~~l~~l~ 318 (321)
T COG3458 276 STQFAAYNALTT----------SKTIEIYPYFAHEGGPGFQ-----SRQQVHFLKILF 318 (321)
T ss_pred hhhHHHhhcccC----------CceEEEeeccccccCcchh-----HHHHHHHHHhhc
Confidence 998888888743 3467788888897654322 123456665443
No 35
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.76 E-value=2.5e-17 Score=174.29 Aligned_cols=249 Identities=14% Similarity=0.065 Sum_probs=152.2
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
++..++..+...||.++.+..+.|++ ..+.|+||++||..+... .|...+...|+++||.|+++|+||.|.....
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDTCT--FFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCccc--hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 34445555566799999998888864 246789999999644321 1222344566667999999999996643210
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc------
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------ 609 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------ 609 (734)
.+....-....+|+.+.++.+..+...+..++.|+|||+||++++.++.++|++++++|+.+|+.......
T Consensus 133 ---~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 133 ---HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred ---CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH
Confidence 00000011124455556666544333445689999999999999999999999999999998865321100
Q ss_pred -----------ccc--cCcccccc--cCCCC-----------------CHHHHHHHHhCCc-cCCCCCCCCCccCCcEEE
Q psy4818 610 -----------KFT--IAYYSESE--FGSPN-----------------NKTHFHNLLSYSP-LHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 610 -----------~~~--~~~~~~~~--~g~~~-----------------~~~~~~~~~~~sp-~~~~~~p~~~~~~P~~Li 656 (734)
... ........ +..+. -......+..... ...+.. ++.| +||
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~----i~~P-~Li 284 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE----VSLP-LLI 284 (349)
T ss_pred HHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc----CCCC-EEE
Confidence 000 00000000 00000 0000111111001 112222 6777 999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch--HHhHHHHHHHHHHHHHHcC
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL--MKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~fl~~~l~ 726 (734)
+||++|..|++..+.++++++... ..++++++++||...... ....+.+..+++||.+++.
T Consensus 285 i~G~~D~vv~~~~~~~l~~~~~~~---------~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 285 LHGEADKVTDPSVSKFLYEKASSS---------DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred EEeCCCCccChHHHHHHHHHcCCC---------CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 999999999999999988877432 357888999999875322 2123477889999998874
No 36
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=3.3e-16 Score=169.40 Aligned_cols=240 Identities=15% Similarity=0.142 Sum_probs=161.4
Q ss_pred cEEEEEEeCCC-CceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEEC
Q psy4818 154 KHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 232 (734)
Q Consensus 154 ~~la~~~~~~g-~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l 232 (734)
++|||+....+ ...++||++|.+++.....+........+.|||||+.|+|++... ...+||++++
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~-------------g~~~i~i~dl 230 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-------------GRSALVIQTL 230 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecC-------------CCcEEEEEEC
Confidence 78999987543 335799999999876554444443346899999999999987532 2347999999
Q ss_pred CCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE-EEEE
Q psy4818 233 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIA 311 (734)
Q Consensus 233 ~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~-~~~s 311 (734)
.++..+ .+...+. ....+.|||||++|++..... ...+||++|++++. ...++....... ..|+
T Consensus 231 ~~G~~~--~l~~~~~---~~~~~~~SPDG~~La~~~~~~-g~~~I~~~d~~tg~---------~~~lt~~~~~~~~~~wS 295 (429)
T PRK03629 231 ANGAVR--QVASFPR---HNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQ---------IRQVTDGRSNNTEPTWF 295 (429)
T ss_pred CCCCeE--EccCCCC---CcCCeEECCCCCEEEEEEcCC-CCcEEEEEECCCCC---------EEEccCCCCCcCceEEC
Confidence 876532 2322222 234689999999999976542 33689999998842 233443322222 2499
Q ss_pred ecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeee
Q psy4818 312 NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 391 (734)
Q Consensus 312 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~ 391 (734)
|||++|+|.+++.+ ..+||.++++++. .+.++... .........++++.+++....++...|+++|+.+|+. +.
T Consensus 296 PDG~~I~f~s~~~g-~~~Iy~~d~~~g~---~~~lt~~~-~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~ 369 (429)
T PRK03629 296 PDSQNLAYTSDQAG-RPQVYKVNINGGA---PQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QV 369 (429)
T ss_pred CCCCEEEEEeCCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EE
Confidence 99999999998754 4579999998765 35554433 2222223345656787777777777899999977764 66
Q ss_pred eCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 392 FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 392 l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.. ......+++||++.+++....- .-..++.+++
T Consensus 370 Lt~~-~~~~~p~~SpDG~~i~~~s~~~-~~~~l~~~~~ 405 (429)
T PRK03629 370 LTDT-FLDETPSIAPNGTMVIYSSSQG-MGSVLNLVST 405 (429)
T ss_pred eCCC-CCCCCceECCCCCEEEEEEcCC-CceEEEEEEC
Confidence 6643 2233577889998887765532 2356888888
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.75 E-value=6.1e-18 Score=154.24 Aligned_cols=210 Identities=17% Similarity=0.180 Sum_probs=151.4
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..-.||++||.-|++..- .....+|.++||.|.+|+|||+|-..+.|-..+..+| ++|+.++.++|.+.++
T Consensus 13 ~G~~AVLllHGFTGt~~Dv---r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy- 84 (243)
T COG1647 13 GGNRAVLLLHGFTGTPRDV---RMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY- 84 (243)
T ss_pred cCCEEEEEEeccCCCcHHH---HHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC-
Confidence 3447889999976665432 2356788889999999999999988888888887777 8899999999998887
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-ccccCcccc---cccCCCCCHHHHHHHHhCC--cc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-KFTIAYYSE---SEFGSPNNKTHFHNLLSYS--PL 639 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-~~~~~~~~~---~~~g~~~~~~~~~~~~~~s--p~ 639 (734)
+.|+|.|.|+||.+++.++.++| .+++|..++-+...+.. ....--.|. +.|-.+..++.-+.++++. |.
T Consensus 85 --~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~ 160 (243)
T COG1647 85 --DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPM 160 (243)
T ss_pred --CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchH
Confidence 57999999999999999999998 46666555433322110 000000111 2222233222233444444 21
Q ss_pred --------------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC
Q psy4818 640 --------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT 705 (734)
Q Consensus 640 --------------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 705 (734)
.++.. |..| +||++|.+|+.||...+..++..+... +.+|..|.++||-+..
T Consensus 161 ~~~~~~~~~i~~~~~~~~~----I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~---------~KeL~~~e~SgHVIt~ 226 (243)
T COG1647 161 TTTAQLKKLIKDARRSLDK----IYSP-TLVVQGRQDEMVPAESANFIYDHVESD---------DKELKWLEGSGHVITL 226 (243)
T ss_pred HHHHHHHHHHHHHHhhhhh----cccc-hhheecccCCCCCHHHHHHHHHhccCC---------cceeEEEccCCceeec
Confidence 23443 6667 999999999999999999999887644 6689999999999987
Q ss_pred chHHhHHHHHHHHHHHH
Q psy4818 706 PLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 706 ~~~~~~~~~~~~~~fl~ 722 (734)
... +....+.++.||.
T Consensus 227 D~E-rd~v~e~V~~FL~ 242 (243)
T COG1647 227 DKE-RDQVEEDVITFLE 242 (243)
T ss_pred chh-HHHHHHHHHHHhh
Confidence 655 3677888999986
No 38
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.75 E-value=3e-17 Score=170.80 Aligned_cols=228 Identities=20% Similarity=0.207 Sum_probs=159.0
Q ss_pred EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc-HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 465 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS-ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 465 ~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
...++..+++.+|.| ......+.|+|||+|||.......... ..+..++...|+.|+.+|||-..+.
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 344566789999999 323356789999999996554433333 4456677778999999999987764
Q ss_pred cCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchhccccccccCcc
Q psy4818 544 KKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFNKFTIAYY 616 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~~ 616 (734)
.-...++|+.+++.|+.++. -+||++|+|+|+|+||.|++.++.+..+ ..++.+..+|.+|... .....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~--- 200 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL--- 200 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch---
Confidence 23445789999999999874 3899999999999999999998865432 4589999999998875 11000
Q ss_pred cccccCC--CCCHHHHH-----HH---------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 617 SESEFGS--PNNKTHFH-----NL---------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 617 ~~~~~g~--~~~~~~~~-----~~---------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
..++. ........ .+ ...+|+..... ...||+||++|+.|...+ ++..+.++|+++
T Consensus 201 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~----~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~a 272 (312)
T COG0657 201 --PGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDL----SGLPPTLIQTAEFDPLRD--EGEAYAERLRAA 272 (312)
T ss_pred --hhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccc----cCCCCEEEEecCCCcchh--HHHHHHHHHHHc
Confidence 01110 00000000 00 12344433321 237889999999998877 999999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCCCch-HHhHHHHHHHHHHHHH
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQGTPL-MKSIEEMTDIYVFLMK 723 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~ 723 (734)
|+++++..+++..|+|.... ....+...++..|+..
T Consensus 273 -------gv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 273 -------GVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred -------CCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999984322 2224445566777763
No 39
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.75 E-value=2.2e-16 Score=179.63 Aligned_cols=259 Identities=18% Similarity=0.152 Sum_probs=175.5
Q ss_pred CCCCCCCceEEEEEEEcC-----CCc--EEeEEEEEeccccCCCCCcEEEE----ecCCCCCc--------------CC-
Q psy4818 450 PEFEPTLFQTKQVYFRSK-----DGT--RVPMYIIHRVGALRNRRNPVIIY----GYGGYGVS--------------VL- 503 (734)
Q Consensus 450 ~~~~~~~~~~~~~~~~s~-----dg~--~i~~~~~~p~~~~~~~~~P~vv~----~hGg~~~~--------------~~- 503 (734)
+.|+...+..|.+++.+. ||+ .|.+.|++|+....+-+.|+|+- ..|..... ..
T Consensus 161 ~~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 161 PVFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKETASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred cccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCccCCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 346777777888888774 553 68899999987543347788875 22320000 00
Q ss_pred --------------------ccc----cHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHH
Q psy4818 504 --------------------PTF----SISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYM 559 (734)
Q Consensus 504 --------------------~~~----~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 559 (734)
..| ...+..+++++||+|++.|.||.++.+..|.. .+..+.+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHH
Confidence 000 11244677788999999999997765443322 2345688999999999
Q ss_pred HHc--CCCC------------CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc----cCccc----
Q psy4818 560 INK--KYTK------------PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IAYYS---- 617 (734)
Q Consensus 560 ~~~--~~~d------------~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~~~~~---- 617 (734)
..+ .++| .+|||++|.||||+++.++|+..|..++|+|+.+++.++..++... ....|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 854 2344 5799999999999999999998888889999999999876543210 00001
Q ss_pred ---cccc--------CCC-CCHHHH-------------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCC
Q psy4818 618 ---ESEF--------GSP-NNKTHF-------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 666 (734)
Q Consensus 618 ---~~~~--------g~~-~~~~~~-------------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~ 666 (734)
..++ |.- ...+.+ +++.+.+++.++.+ ++.| +|++||.+|.+|+
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~k----IkvP-vLlIhGw~D~~V~ 470 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADK----IKAS-VLVVHGLNDWNVK 470 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhC----CCCC-EEEEeeCCCCCCC
Confidence 0000 000 000000 12333455555554 7888 9999999999999
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 667 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 667 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+.++.+++++|++. +.+.++++.+ .+|....... ..+....+++||.++|..
T Consensus 471 ~~~s~~ly~aL~~~-------g~pkkL~l~~-g~H~~~~~~~-~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 471 PKQVYQWWDALPEN-------GVPKKLFLHQ-GGHVYPNNWQ-SIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred hHHHHHHHHHHHhc-------CCCeEEEEeC-CCccCCCchh-HHHHHHHHHHHHHhcccc
Confidence 99999999999998 8888887765 5786544332 357778889999999864
No 40
>PHA02857 monoglyceride lipase; Provisional
Probab=99.74 E-value=1.1e-16 Score=164.16 Aligned_cols=231 Identities=12% Similarity=0.096 Sum_probs=147.4
Q ss_pred EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc
Q psy4818 465 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 544 (734)
Q Consensus 465 ~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~ 544 (734)
.+.||..+++.++.|.. .+.|+|+++||....+. .|.. +...|+++||.|+++|+||.|..... .. ....
T Consensus 6 ~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~~--~~~~-~~~~l~~~g~~via~D~~G~G~S~~~--~~-~~~~ 75 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT----YPKALVFISHGAGEHSG--RYEE-LAENISSLGILVFSHDHIGHGRSNGE--KM-MIDD 75 (276)
T ss_pred ecCCCCEEEEEeccCCC----CCCEEEEEeCCCccccc--hHHH-HHHHHHhCCCEEEEccCCCCCCCCCc--cC-CcCC
Confidence 35699999999998852 45689999999754433 3433 45667777999999999996643211 00 0001
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc--------------cc
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--------------NK 610 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--------------~~ 610 (734)
-...++|+...++++.+. ....+++++|+|+||.+++.++.++|++++++|+.+|..+.... ..
T Consensus 76 ~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYP 153 (276)
T ss_pred HHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCC
Confidence 112256677777766543 22357999999999999999999999999999999997652110 00
Q ss_pred cccCcccccccCCCCCHHHHHHHHhCCc----------------------cCCCCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 611 FTIAYYSESEFGSPNNKTHFHNLLSYSP----------------------LHNIKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 611 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp----------------------~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
......+...+-.....+... ...+| ...+.. +++| +|+++|++|..||+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vliv~G~~D~i~~~~ 226 (276)
T PHA02857 154 NKIVGKLCPESVSRDMDEVYK--YQYDPLVNHEKIKAGFASQVLKATNKVRKIIPK----IKTP-ILILQGTNNEISDVS 226 (276)
T ss_pred CCccCCCCHhhccCCHHHHHH--HhcCCCccCCCccHHHHHHHHHHHHHHHHhccc----CCCC-EEEEecCCCCcCChH
Confidence 000000000000000000000 00111 112232 6777 999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHH
Q psy4818 669 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKS 724 (734)
Q Consensus 669 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 724 (734)
.+.++.+.+.. .+.+.+++++||....... .+.+.++++++||.++
T Consensus 227 ~~~~l~~~~~~----------~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 227 GAYYFMQHANC----------NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHccC----------CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99888776532 3578999999998875432 2467888999999986
No 41
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=3.2e-16 Score=170.14 Aligned_cols=207 Identities=19% Similarity=0.185 Sum_probs=145.4
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
.+.++|||.+++|.....+ ...||+.+..+++.+.+.+.... ...++|||||++|||+.+.+|. .+||+
T Consensus 222 ~p~wSPDG~~La~~s~~~g--~~~L~~~dl~tg~~~~lt~~~g~-------~~~~~wSPDG~~La~~~~~~g~--~~Iy~ 290 (448)
T PRK04792 222 SPAWSPDGRKLAYVSFENR--KAEIFVQDIYTQVREKVTSFPGI-------NGAPRFSPDGKKLALVLSKDGQ--PEIYV 290 (448)
T ss_pred CceECCCCCEEEEEEecCC--CcEEEEEECCCCCeEEecCCCCC-------cCCeeECCCCCEEEEEEeCCCC--eEEEE
Confidence 4566799999999987653 36799998777776666654321 2468999999999999877664 78999
Q ss_pred EECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeE
Q psy4818 173 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 252 (734)
Q Consensus 173 ~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~ 252 (734)
+|+++++..+.+........++|||||++|+|++... ...+||++++.++.... +.+.. .+.
T Consensus 291 ~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~-------------g~~~Iy~~dl~~g~~~~-Lt~~g----~~~ 352 (448)
T PRK04792 291 VDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERG-------------GKPQIYRVNLASGKVSR-LTFEG----EQN 352 (448)
T ss_pred EECCCCCeEECccCCCCccceEECCCCCEEEEEECCC-------------CCceEEEEECCCCCEEE-EecCC----CCC
Confidence 9999998655444333336799999999999987532 23589999998765322 22221 123
Q ss_pred EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEE
Q psy4818 253 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 332 (734)
Q Consensus 253 ~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 332 (734)
..+.|||||++|++..... ...+||++|++++. ...+..........|+|||+.|+|.++.++ ...|+.
T Consensus 353 ~~~~~SpDG~~l~~~~~~~-g~~~I~~~dl~~g~---------~~~lt~~~~d~~ps~spdG~~I~~~~~~~g-~~~l~~ 421 (448)
T PRK04792 353 LGGSITPDGRSMIMVNRTN-GKFNIARQDLETGA---------MQVLTSTRLDESPSVAPNGTMVIYSTTYQG-KQVLAA 421 (448)
T ss_pred cCeeECCCCCEEEEEEecC-CceEEEEEECCCCC---------eEEccCCCCCCCceECCCCCEEEEEEecCC-ceEEEE
Confidence 4579999999999976543 33689999998842 222332211112249999999999887654 456999
Q ss_pred EecCCCC
Q psy4818 333 INLNNPC 339 (734)
Q Consensus 333 ~d~~~~~ 339 (734)
+++++..
T Consensus 422 ~~~~G~~ 428 (448)
T PRK04792 422 VSIDGRF 428 (448)
T ss_pred EECCCCc
Confidence 9987654
No 42
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=1.2e-15 Score=165.23 Aligned_cols=238 Identities=13% Similarity=0.124 Sum_probs=159.4
Q ss_pred cEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC
Q psy4818 154 KHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG 233 (734)
Q Consensus 154 ~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 233 (734)
.+|||....++ ..+||++|.++....+.+........++|||||+.|+|++... ...+||++++.
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~-------------~~~~I~~~dl~ 228 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES-------------KKPVVYVHDLA 228 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC-------------CCcEEEEEECC
Confidence 67999886444 4789999987655443333333346899999999999988532 23479999998
Q ss_pred CCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE-EEEEe
Q psy4818 234 TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIAN 312 (734)
Q Consensus 234 t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~-~~~s~ 312 (734)
++... .+...+ .....+.|||||+.|++..... ...+||++|+.++. .+.++....... ..|+|
T Consensus 229 ~g~~~--~l~~~~---g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~~~~~~~~~~wSp 293 (427)
T PRK02889 229 TGRRR--VVANFK---GSNSAPAWSPDGRTLAVALSRD-GNSQIYTVNADGSG---------LRRLTQSSGIDTEPFFSP 293 (427)
T ss_pred CCCEE--EeecCC---CCccceEECCCCCEEEEEEccC-CCceEEEEECCCCC---------cEECCCCCCCCcCeEEcC
Confidence 77432 232222 2345789999999999876543 33799999998732 233333222222 24999
Q ss_pred cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 313 NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 313 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
||++|+|.+++.+ ..+||.++++++. .+.++... .........++++.+++....++..+|+++|+.+|+. +.+
T Consensus 294 DG~~l~f~s~~~g-~~~Iy~~~~~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~-~~l 367 (427)
T PRK02889 294 DGRSIYFTSDRGG-APQIYRMPASGGA---AQRVTFTG-SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV-TAL 367 (427)
T ss_pred CCCEEEEEecCCC-CcEEEEEECCCCc---eEEEecCC-CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe-EEc
Confidence 9999999988754 4579999987765 35555333 2222233345667787777666667899999977765 556
Q ss_pred CCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 393 PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 393 ~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.. +....++++||++.+++...... -..++.+++
T Consensus 368 t~~-~~~~~p~~spdg~~l~~~~~~~g-~~~l~~~~~ 402 (427)
T PRK02889 368 TDT-TRDESPSFAPNGRYILYATQQGG-RSVLAAVSS 402 (427)
T ss_pred cCC-CCccCceECCCCCEEEEEEecCC-CEEEEEEEC
Confidence 533 22346788999999888776543 356888888
No 43
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=9.4e-16 Score=166.75 Aligned_cols=241 Identities=16% Similarity=0.162 Sum_probs=161.3
Q ss_pred CcEEEEEEeCC--CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEE
Q psy4818 153 GKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 230 (734)
Q Consensus 153 G~~la~~~~~~--g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (734)
+++|||+.... +...++|+++|.+++.....+..+.....+.|||||+.|+|++... ...+||++
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~-------------~~~~l~~~ 233 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER-------------GRSAIYVQ 233 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC-------------CCcEEEEE
Confidence 56789987643 2346789999998776554444443447899999999999997532 23579999
Q ss_pred ECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE-EE
Q psy4818 231 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EI 309 (734)
Q Consensus 231 ~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~-~~ 309 (734)
++.++... .+...+ .....+.|||||++|+|..+.. ...+||++|++++. ...++....... ..
T Consensus 234 dl~~g~~~--~l~~~~---g~~~~~~~SpDG~~l~~~~s~~-g~~~Iy~~d~~~g~---------~~~lt~~~~~~~~~~ 298 (433)
T PRK04922 234 DLATGQRE--LVASFR---GINGAPSFSPDGRRLALTLSRD-GNPEIYVMDLGSRQ---------LTRLTNHFGIDTEPT 298 (433)
T ss_pred ECCCCCEE--EeccCC---CCccCceECCCCCEEEEEEeCC-CCceEEEEECCCCC---------eEECccCCCCccceE
Confidence 99876432 232221 2334689999999999887653 33699999998842 233333222222 24
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCcee
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~ 389 (734)
|+|||++|+|.+++.+ ..+||.++++++. .+.++... .........++++.+++....++..+|+++|+.+|+.
T Consensus 299 ~spDG~~l~f~sd~~g-~~~iy~~dl~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~- 372 (433)
T PRK04922 299 WAPDGKSIYFTSDRGG-RPQIYRVAASGGS---AERLTFQG-NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV- 372 (433)
T ss_pred ECCCCCEEEEEECCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-
Confidence 9999999999998755 3579999998765 45555433 2222223345657777776655566899999977765
Q ss_pred eeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 390 HSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 390 ~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++... ....+++++|++.+++.... ..-..+|.+++
T Consensus 373 ~~Lt~~~-~~~~p~~spdG~~i~~~s~~-~g~~~L~~~~~ 410 (433)
T PRK04922 373 RTLTPGS-LDESPSFAPNGSMVLYATRE-GGRGVLAAVST 410 (433)
T ss_pred EECCCCC-CCCCceECCCCCEEEEEEec-CCceEEEEEEC
Confidence 5665432 23356788999888877654 22357999998
No 44
>KOG1552|consensus
Probab=99.72 E-value=1.3e-16 Score=150.54 Aligned_cols=218 Identities=18% Similarity=0.217 Sum_probs=153.8
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcc-ccHHHHHHHHhcCeEEEEEecccCCCCCchh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDW 536 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~ 536 (734)
..+-+..++.-|..+....+.|.. ...++|+|.||- +...+ ....+..+-...++.|+..||+|.|..+
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGN---a~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~--- 103 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGN---AADLGQMVELFKELSIFLNCNVVSYDYSGYGRSS--- 103 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCc---ccchHHHHHHHHHHhhcccceEEEEecccccccC---
Confidence 455566667778888888888764 357999999995 11111 1111222323358999999999944322
Q ss_pred hhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-ccCc
Q psy4818 537 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-TIAY 615 (734)
Q Consensus 537 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~~~~ 615 (734)
|. ....+.++|+.++.+||.+..- .+++|+++|+|+|.-.+..+|.+.| .+|+|+.+|+++..+.+.. ....
T Consensus 104 ---G~-psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~ 176 (258)
T KOG1552|consen 104 ---GK-PSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTT 176 (258)
T ss_pred ---CC-cccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceE
Confidence 21 2234889999999999988754 7889999999999999999999998 6999999999998876532 1111
Q ss_pred ccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy4818 616 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 695 (734)
Q Consensus 616 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 695 (734)
.|+..| +-+..|+. +++| +||+||+.|.+|+..|+.+++++.++. ++-..
T Consensus 177 ~~~d~f---------------~~i~kI~~----i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~----------~epl~ 226 (258)
T KOG1552|consen 177 YCFDAF---------------PNIEKISK----ITCP-VLIIHGTDDEVVDFSHGKALYERCKEK----------VEPLW 226 (258)
T ss_pred Eeeccc---------------cccCccee----ccCC-EEEEecccCceecccccHHHHHhcccc----------CCCcE
Confidence 232222 12566665 8888 999999999999999999999988754 44556
Q ss_pred eCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 696 EQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
..|+||.......+-++ .+..|+...+
T Consensus 227 v~g~gH~~~~~~~~yi~---~l~~f~~~~~ 253 (258)
T KOG1552|consen 227 VKGAGHNDIELYPEYIE---HLRRFISSVL 253 (258)
T ss_pred EecCCCcccccCHHHHH---HHHHHHHHhc
Confidence 67999987654433333 3445555443
No 45
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=1.4e-15 Score=165.95 Aligned_cols=249 Identities=16% Similarity=0.138 Sum_probs=164.0
Q ss_pred EeeEEeCCCCcEEEEEEeCC--CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~--g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
+.+.... -.++|||..... +.+.++|+++|.+++.....+........+.|||||+.|+|++...
T Consensus 154 ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~------------ 220 (430)
T PRK00178 154 LTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ------------ 220 (430)
T ss_pred HhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC------------
Confidence 3343333 566799987543 3456799999999876544433333346889999999999998532
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...+||++++.++..+ .+...+ +....+.|||||++|+|..... ...+||++|++++. ...++.
T Consensus 221 -~~~~l~~~~l~~g~~~--~l~~~~---g~~~~~~~SpDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~ 284 (430)
T PRK00178 221 -KRPRIFVQNLDTGRRE--QITNFE---GLNGAPAWSPDGSKLAFVLSKD-GNPEIYVMDLASRQ---------LSRVTN 284 (430)
T ss_pred -CCCEEEEEECCCCCEE--EccCCC---CCcCCeEECCCCCEEEEEEccC-CCceEEEEECCCCC---------eEEccc
Confidence 2347999999877533 222221 2334689999999999887653 33799999998842 233333
Q ss_pred cccceE-EEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
...... ..|+|||++|+|.+++.+ ..+||.+++++++ ++.++... .........++++.+++....++...|++
T Consensus 285 ~~~~~~~~~~spDg~~i~f~s~~~g-~~~iy~~d~~~g~---~~~lt~~~-~~~~~~~~Spdg~~i~~~~~~~~~~~l~~ 359 (430)
T PRK00178 285 HPAIDTEPFWGKDGRTLYFTSDRGG-KPQIYKVNVNGGR---AERVTFVG-NYNARPRLSADGKTLVMVHRQDGNFHVAA 359 (430)
T ss_pred CCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECCCCC---EEEeecCC-CCccceEECCCCCEEEEEEccCCceEEEE
Confidence 222222 249999999999988754 4579999998765 45555433 11212223356677888776666678999
Q ss_pred EECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|+.+|+. +.++... .....+++||++.++++..... -..+|.+++
T Consensus 360 ~dl~tg~~-~~lt~~~-~~~~p~~spdg~~i~~~~~~~g-~~~l~~~~~ 405 (430)
T PRK00178 360 QDLQRGSV-RILTDTS-LDESPSVAPNGTMLIYATRQQG-RGVLMLVSI 405 (430)
T ss_pred EECCCCCE-EEccCCC-CCCCceECCCCCEEEEEEecCC-ceEEEEEEC
Confidence 99987765 6665432 2225678899988877654322 246888888
No 46
>PRK10749 lysophospholipase L2; Provisional
Probab=99.72 E-value=3.9e-16 Score=163.62 Aligned_cols=246 Identities=13% Similarity=0.068 Sum_probs=147.7
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
-+...+...||.++....+.|. .+.|+||++||...... .|.. ++..++++||.|+++|+||.|..+.....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~--~y~~-~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYV--KYAE-LAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHH--HHHH-HHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 3455666778988888776653 24578999999643221 2222 34445567999999999997765422111
Q ss_pred ccccccCCCchhHHHHHHHHHHHc--CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc------
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINK--KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK------ 610 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~--~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~------ 610 (734)
...+ ....++++.+.+..+++. ...+..++.++|||+||.+++.++.++|+.++++|+.+|.........
T Consensus 102 ~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 102 PHRG--HVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred CCcC--ccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH
Confidence 0000 112444444443333322 112456899999999999999999999999999999988653210000
Q ss_pred -------c--c------cCcccccccCCC----CCHHHH----HHHHhCCcc----------------------CCCCCC
Q psy4818 611 -------F--T------IAYYSESEFGSP----NNKTHF----HNLLSYSPL----------------------HNIKVP 645 (734)
Q Consensus 611 -------~--~------~~~~~~~~~g~~----~~~~~~----~~~~~~sp~----------------------~~~~~p 645 (734)
. . ....|....... ...+.+ +.+. ..|. .++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA-DDPELRVGGPTYHWVRESILAGEQVLAGAGD- 257 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH-hCCCcccCCCcHHHHHHHHHHHHHHHhhccC-
Confidence 0 0 000011000000 011111 1111 1121 22222
Q ss_pred CCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHH
Q psy4818 646 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKS 724 (734)
Q Consensus 646 ~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 724 (734)
++.| +||+||++|..|++..+.+++++++++ .......++++++++||....... .+.+.+..+++||.++
T Consensus 258 ---i~~P-~Lii~G~~D~vv~~~~~~~~~~~l~~~----~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 258 ---ITTP-LLLLQAEEERVVDNRMHDRFCEARTAA----GHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred ---CCCC-EEEEEeCCCeeeCHHHHHHHHHHHhhc----CCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 6777 999999999999999999999999876 111134578999999998654322 2356778889999764
No 47
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.71 E-value=4.8e-15 Score=156.44 Aligned_cols=303 Identities=13% Similarity=0.113 Sum_probs=185.0
Q ss_pred EEeCCeEEEEEEcCC----CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 97 QRQENNYFYFHNKGL----QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
++||+++++..+... .-...+|+.+...+..+.|.... ..+..+.|||||++|||+.+ ..||+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~-------~~~~~~~~sP~g~~~~~v~~------~nly~ 67 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPP-------PKLQDAKWSPDGKYIAFVRD------NNLYL 67 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EE-------TTBSEEEE-SSSTEEEEEET------TEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCc-------cccccceeecCCCeeEEEec------CceEE
Confidence 357888887665321 12345666666555555554431 12568999999999999985 36999
Q ss_pred EECCCCCcccccccc------------------cccCeeEEEcCCcEEEEEEEecCCCCC--------CCC---cc----
Q psy4818 173 KDVDTGKDYPEVLKN------------------VKFPSISWTHDHKGFFYNQYCDINGTA--------DGT---ET---- 219 (734)
Q Consensus 173 ~dl~~g~~~~~~~~~------------------~~~~~~~wSpDg~~l~y~~~~~~~~~~--------~~~---~~---- 219 (734)
+++.+++.++.+..+ ....++.|||||++|+|.+.++..... ... ..
T Consensus 68 ~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~ 147 (353)
T PF00930_consen 68 RDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIR 147 (353)
T ss_dssp ESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE
T ss_pred EECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccc
Confidence 999888755444322 023578899999999999998764321 110 00
Q ss_pred -----cccCCcEEEEEECCCCCCCCeeEEe-cCCCCeeEEEEEEecCCcEEEEE-EecCCCCceEEEEeCCCCCCCcccC
Q psy4818 220 -----TAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVS-TSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 220 -----~~~~~~~l~~~~l~t~~~~~~~v~~-~~~~~~~~~~~~~SpDG~~l~~~-~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
+.+...+|+++++.++....+.+-. ......++..+.|++|++.+++. .++......+.++|..++..+.+..
T Consensus 148 YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~ 227 (353)
T PF00930_consen 148 YPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLE 227 (353)
T ss_dssp --BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEE
T ss_pred cCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEE
Confidence 1122346788888776543222211 11335578899999999955544 4554445788999998743321110
Q ss_pred --CCCceeeeccccceEEEEE-ecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCEEEE
Q psy4818 293 --KFPLKTVIPGMDHHHEIIA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIV 368 (734)
Q Consensus 293 --~~~~~~l~~~~~~~~~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~ 368 (734)
...|. .. .....+. +++..+++++.+++ ..+||+++.+++. .+.|+.+. ..+.....+.. ++.|||
T Consensus 228 e~~~~Wv----~~-~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~~---~~~lT~G~-~~V~~i~~~d~~~~~iyf 297 (353)
T PF00930_consen 228 ETSDGWV----DV-YDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGGK---PRQLTSGD-WEVTSILGWDEDNNRIYF 297 (353)
T ss_dssp EESSSSS----SS-SSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSSE---EEESS-SS-S-EEEEEEEECTSSEEEE
T ss_pred ecCCcce----ee-ecccccccCCCCEEEEEEEcCC-CcEEEEEcccccc---eeccccCc-eeecccceEcCCCCEEEE
Confidence 00110 00 1112244 78999999998766 5569999998876 35565554 55544344433 468888
Q ss_pred EEEeCC--ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCc
Q psy4818 369 HYIQNV--RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPG 422 (734)
Q Consensus 369 ~~~~~~--~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~ 422 (734)
.+..+. ..+||+++++++..++.|+...+....+++||+++.++..|+++.+|+
T Consensus 298 ~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 298 TANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp EESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred EecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 887643 569999999624455888865333246778899999999999999985
No 48
>PRK11460 putative hydrolase; Provisional
Probab=99.70 E-value=9e-16 Score=151.51 Aligned_cols=186 Identities=15% Similarity=0.184 Sum_probs=128.4
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCC----CCCchhhhccccccCCCc-------hhHHH
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG----ELGEDWHNAGRLLKKQNC-------FDDFQ 553 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~----~~g~~~~~~~~~~~~~~~-------~~D~~ 553 (734)
....|+||++||..++... |. .+...|.+.++.+.++.+||.. ..|..|+... ....... .+.+.
T Consensus 13 ~~~~~~vIlLHG~G~~~~~--~~-~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVA--MG-EIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCCcEEEEEeCCCCChHH--HH-HHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHH
Confidence 3567899999997554432 22 2445666556655666666631 2356676531 1111121 23344
Q ss_pred HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHH
Q psy4818 554 AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNL 633 (734)
Q Consensus 554 ~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 633 (734)
+.++++.++..++++||+++|+|+||.+++.++.++|++++++|+..|... . .+..
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---------------~--~~~~------- 144 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---------------S--LPET------- 144 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------c--cccc-------
Confidence 556666666668899999999999999999999889998888877655221 0 0000
Q ss_pred HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHH
Q psy4818 634 LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEE 713 (734)
Q Consensus 634 ~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 713 (734)
+ . .+.| +|++||++|++||++.+.+++++|++. |.++++++|+++||.+.. +.
T Consensus 145 ----~-----~----~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~-------g~~~~~~~~~~~gH~i~~------~~ 197 (232)
T PRK11460 145 ----A-----P----TATT-IHLIHGGEDPVIDVAHAVAAQEALISL-------GGDVTLDIVEDLGHAIDP------RL 197 (232)
T ss_pred ----c-----c----CCCc-EEEEecCCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCCCCH------HH
Confidence 0 0 2334 999999999999999999999999998 889999999999999963 34
Q ss_pred HHHHHHHHHHHc
Q psy4818 714 MTDIYVFLMKSL 725 (734)
Q Consensus 714 ~~~~~~fl~~~l 725 (734)
...+.+||.+.|
T Consensus 198 ~~~~~~~l~~~l 209 (232)
T PRK11460 198 MQFALDRLRYTV 209 (232)
T ss_pred HHHHHHHHHHHc
Confidence 455677777776
No 49
>KOG1455|consensus
Probab=99.69 E-value=6.6e-16 Score=148.72 Aligned_cols=245 Identities=14% Similarity=0.117 Sum_probs=157.7
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
....-.++..+|.++....+.|.+- .++.-+|+++||. +....+.|+.. +..|+..||.|+..|++|+|... -
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~-g~~~s~~~~~~-a~~l~~~g~~v~a~D~~GhG~Sd---G 98 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGY-GEHSSWRYQST-AKRLAKSGFAVYAIDYEGHGRSD---G 98 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCC-cccchhhHHHH-HHHHHhCCCeEEEeeccCCCcCC---C
Confidence 3444556678898898888888652 2556688889985 44444455543 45566789999999999966432 1
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc------
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF------ 611 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------ 611 (734)
..+....-...++|+..-.+.+..+.--.--...++|+||||.+++.++.++|+.+.++|+.+|+.-...-...
T Consensus 99 l~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 99 LHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 11111111223455555555544443333346799999999999999999999999999999997643322100
Q ss_pred ------ccCccccc----ccCCC--CCHHHHHHHHhCCcc----------------------CCCCCCCCCccCCcEEEE
Q psy4818 612 ------TIAYYSES----EFGSP--NNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATLVL 657 (734)
Q Consensus 612 ------~~~~~~~~----~~g~~--~~~~~~~~~~~~sp~----------------------~~~~~p~~~~~~P~~Li~ 657 (734)
...+.|.. ....+ .+++.. .....+|+ .+... +..| +||+
T Consensus 179 ~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r-~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~----vtvP-flil 252 (313)
T KOG1455|consen 179 ILTLLSKLIPTWKIVPTKDIIDVAFKDPEKR-KILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE----VTVP-FLIL 252 (313)
T ss_pred HHHHHHHhCCceeecCCccccccccCCHHHH-HHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc----cccc-EEEE
Confidence 01111210 00000 122221 12222332 34443 6777 9999
Q ss_pred ecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC--chHHhHHHHHHHHHHHHHH
Q psy4818 658 TGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT--PLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 658 ~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 724 (734)
||+.|.++.+.-+.++++..... +..++.|||.-|.... +.........++++||.++
T Consensus 253 HG~dD~VTDp~~Sk~Lye~A~S~---------DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 253 HGTDDKVTDPKVSKELYEKASSS---------DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ecCCCcccCcHHHHHHHHhccCC---------CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999977654 5578999999998763 4444577889999999875
No 50
>KOG1515|consensus
Probab=99.68 E-value=2.3e-15 Score=152.73 Aligned_cols=242 Identities=17% Similarity=0.180 Sum_probs=164.7
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc---CCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
....+.+. ....++.++|.|.......+.|+|||+|||...- ..+.|...+..+..+.+.+|+.+|||-..|.
T Consensus 62 ~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-- 137 (336)
T KOG1515|consen 62 TSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-- 137 (336)
T ss_pred eeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC--
Confidence 45566554 3456899999999865447899999999985432 3444554455555778999999999987763
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHc----CCCCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcch
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINK----KYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALD 604 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d 604 (734)
.-...++|..+|+.|+.++ ..+|++||+|+|-|+||.+|..++.+. +-..++.|+..|++.
T Consensus 138 ---------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 138 ---------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred ---------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 3456689999999999886 458999999999999999999987543 235799999999987
Q ss_pred hccccccccCcccccccCCCC-CHHHHHHHH-hC-------------CccCCCC-CCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 605 MLRFNKFTIAYYSESEFGSPN-NKTHFHNLL-SY-------------SPLHNIK-VPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 605 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~-------------sp~~~~~-~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
..........+.+ -+.+. ....++.+. .. +|..+.. ........|++||+.++.|.. ..
T Consensus 209 ~~~~~~~e~~~~~---~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L--~D 283 (336)
T KOG1515|consen 209 GTDRTESEKQQNL---NGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVL--RD 283 (336)
T ss_pred CCCCCCHHHHHhh---cCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhh--hh
Confidence 6544321100000 01110 111111111 11 1222100 000036788899999999954 48
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC--c-hHHhHHHHHHHHHHHHHH
Q psy4818 669 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT--P-LMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 669 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~-~~~~~~~~~~~~~fl~~~ 724 (734)
++..++++|++. |++++++.++++.|++.. + .....+...++.+|+.+.
T Consensus 284 ~~~~Y~~~Lkk~-------Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 284 EGLAYAEKLKKA-------GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhHHHHHHHHHc-------CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 899999999998 999999999999998742 2 234467777778887653
No 51
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=1.9e-15 Score=160.17 Aligned_cols=245 Identities=16% Similarity=0.089 Sum_probs=153.7
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
+-......+...++..+.+..+.|.. ....|+||++||..+... .|. .++..|+++||.|+++|+||.|.....
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~--~~~-~~a~~L~~~Gy~V~~~D~rGhG~S~~~ 180 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHSG--RYL-HFAKQLTSCGFGVYAMDWIGHGGSDGL 180 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHHH--HHH-HHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 33456666777888899999988853 245689999999754322 233 345667778999999999996643321
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEcCCcchhcccccc-
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALDMLRFNKF- 611 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~~~~~~- 611 (734)
+ +.........+|+.++++++..+. +..++.++|||+||.+++.++. +|+ .++++|+.+|..++......
T Consensus 181 ~---~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~ 254 (395)
T PLN02652 181 H---GYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV 254 (395)
T ss_pred C---CCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH
Confidence 1 100011122467777788776541 2247999999999999997764 564 78999999997654321100
Q ss_pred ---------ccCcc---cccccCCC--CCHHHH-HHH------------------HhCC--ccCCCCCCCCCccCCcEEE
Q psy4818 612 ---------TIAYY---SESEFGSP--NNKTHF-HNL------------------LSYS--PLHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 612 ---------~~~~~---~~~~~g~~--~~~~~~-~~~------------------~~~s--p~~~~~~p~~~~~~P~~Li 656 (734)
..+.. ....++.+ .+++.. ..+ .+.. ...++.. ++.| +||
T Consensus 255 ~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~----I~vP-vLI 329 (395)
T PLN02652 255 GAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS----VTVP-FMV 329 (395)
T ss_pred HHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc----CCCC-EEE
Confidence 00000 00000111 011110 000 0000 0112232 6778 999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+||++|..||+.++.++++++... ..+++++++++|....... +.+.++.+.+||..+++.
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~~---------~k~l~~~~ga~H~l~~e~~-~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAASR---------HKDIKLYDGFLHDLLFEPE-REEVGRDIIDWMEKRLDL 390 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCCC---------CceEEEECCCeEEeccCCC-HHHHHHHHHHHHHHHhhc
Confidence 999999999999999999887532 3467889999998754422 357888899999998863
No 52
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.68 E-value=1.7e-16 Score=155.47 Aligned_cols=187 Identities=19% Similarity=0.182 Sum_probs=122.5
Q ss_pred EEEecCCCCCcCCccccHHHHHHHH-hcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc---CCCC
Q psy4818 491 IIYGYGGYGVSVLPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTK 566 (734)
Q Consensus 491 vv~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 566 (734)
|||+|||............+...++ +.|++|+.+|||-+++. .....++|+.++++|+.++ ...|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 7999999665443333344444444 47999999999986643 2234588999999999987 2478
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchhccccccccCccccccc-CCC-CCHHHHH----HH---
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFNKFTIAYYSESEF-GSP-NNKTHFH----NL--- 633 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~-~~~~~~~----~~--- 633 (734)
+++|+|+|.|+||.|++.++.+..+ ..+++++.+|++|+.......... ..++ ..+ ....... .+
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDD--SNENKDDPFLPAPKIDWFWKLYLPG 147 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHH--HHHHSTTSSSBHHHHHHHHHHHHST
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccc--ccccccccccccccccccccccccc
Confidence 9999999999999999999864322 479999999998872111000000 0000 000 0111111 11
Q ss_pred -----HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC
Q psy4818 634 -----LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 634 -----~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~ 703 (734)
...||+.. ... ...||++|++|+.|.. ..++..|+++|++. |++++++++++.+|.|
T Consensus 148 ~~~~~~~~sp~~~-~~~---~~~Pp~~i~~g~~D~l--~~~~~~~~~~L~~~-------gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 148 SDRDDPLASPLNA-SDL---KGLPPTLIIHGEDDVL--VDDSLRFAEKLKKA-------GVDVELHVYPGMPHGF 209 (211)
T ss_dssp GGTTSTTTSGGGS-SCC---TTCHEEEEEEETTSTT--HHHHHHHHHHHHHT-------T-EEEEEEETTEETTG
T ss_pred ccccccccccccc-ccc---ccCCCeeeeccccccc--hHHHHHHHHHHHHC-------CCCEEEEEECCCeEEe
Confidence 12455544 121 4688999999999965 46899999999998 9999999999999987
No 53
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.67 E-value=9.3e-15 Score=154.78 Aligned_cols=251 Identities=14% Similarity=0.157 Sum_probs=166.2
Q ss_pred cCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc
Q psy4818 109 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV 188 (734)
Q Consensus 109 ~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~ 188 (734)
..+.....++..+..+.....+.+.. ..+..+.|||||+.++|..-..+. ...++++|+.+|+.........
T Consensus 167 ~~~~~~~~l~~~D~dg~~~~~l~~~~-------~~~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g 238 (425)
T COG0823 167 DGGPLPYELALGDYDGYNQQKLTDSG-------SLILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNG 238 (425)
T ss_pred ccCCCCceEEEEccCCcceeEecccC-------cceeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCC
Confidence 34455677888876544555555544 336779999999999999765543 2689999999998543332222
Q ss_pred ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEE
Q psy4818 189 KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 268 (734)
Q Consensus 189 ~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~ 268 (734)
....+.|||||++|+|+...+ ...+||+.++.+.+... +.+ ..+....+.|||||++|+|.+
T Consensus 239 ~~~~P~fspDG~~l~f~~~rd-------------g~~~iy~~dl~~~~~~~--Lt~---~~gi~~~Ps~spdG~~ivf~S 300 (425)
T COG0823 239 NNGAPAFSPDGSKLAFSSSRD-------------GSPDIYLMDLDGKNLPR--LTN---GFGINTSPSWSPDGSKIVFTS 300 (425)
T ss_pred ccCCccCCCCCCEEEEEECCC-------------CCccEEEEcCCCCccee--ccc---CCccccCccCCCCCCEEEEEe
Confidence 337899999999999998643 35689999999887432 222 233445899999999999998
Q ss_pred ecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccce-EEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee
Q psy4818 269 SNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 347 (734)
Q Consensus 269 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 347 (734)
++.+. .+||+++++++ ....++...... ...|||||++|+|.+...+ ...++..++.++.. ++.+.
T Consensus 301 dr~G~-p~I~~~~~~g~---------~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g-~~~i~~~~~~~~~~--~~~lt 367 (425)
T COG0823 301 DRGGR-PQIYLYDLEGS---------QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGG-QWDIDKNDLASGGK--IRILT 367 (425)
T ss_pred CCCCC-cceEEECCCCC---------ceeEeeccCCCCcCccCCCCCCEEEEEeccCC-ceeeEEeccCCCCc--EEEcc
Confidence 77444 79999999983 223444333322 3459999999999984433 36788888876542 34333
Q ss_pred cCCCCceeEEEEE-eeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEee
Q psy4818 348 PEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 402 (734)
Q Consensus 348 ~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~ 402 (734)
... ..+...+ .++..+++.....+.+.+...++ +|+..+.+....+.+...
T Consensus 368 ~~~---~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~-~g~~~~~~~~~~~~~~~p 419 (425)
T COG0823 368 STY---LNESPSWAPNGRMIMFSSGQGGGSVLSLVSL-DGRVSRPLPLADGDVRVP 419 (425)
T ss_pred ccc---cCCCCCcCCCCceEEEeccCCCCceEEEeec-cceeEEEEeccCcceecc
Confidence 322 1122222 34456666666666778888887 787655555444444333
No 54
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=6.1e-14 Score=152.28 Aligned_cols=234 Identities=13% Similarity=0.135 Sum_probs=149.6
Q ss_pred CcEEEEEEeCCC-CceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEE
Q psy4818 153 GKHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 231 (734)
Q Consensus 153 G~~la~~~~~~g-~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (734)
+++|||+....+ ...++|+++|.+++.....+........+.|||||+.|+|++.+. ...+||+++
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~-------------~~~~i~i~d 234 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN-------------KKSQLVVHD 234 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC-------------CCcEEEEEe
Confidence 688999987543 345899999998776444333333347899999999999998632 234799999
Q ss_pred CCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EE
Q psy4818 232 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-II 310 (734)
Q Consensus 232 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~ 310 (734)
+.++..+ .+...+. ....+.|||||++|++..... ...+||++|++++. ...++.+...... .|
T Consensus 235 l~tg~~~--~l~~~~g---~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~~~~~~~~~~w 299 (429)
T PRK01742 235 LRSGARK--VVASFRG---HNGAPAFSPDGSRLAFASSKD-GVLNIYVMGANGGT---------PSQLTSGAGNNTEPSW 299 (429)
T ss_pred CCCCceE--EEecCCC---ccCceeECCCCCEEEEEEecC-CcEEEEEEECCCCC---------eEeeccCCCCcCCEEE
Confidence 9876432 2322221 223689999999999876542 23579999998732 2334433222222 49
Q ss_pred EecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceee
Q psy4818 311 ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH 390 (734)
Q Consensus 311 s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~ 390 (734)
+|||++|+|.+++.+ ..+||.++..++. ..++... . ......++++.+++... ..++++|+.+|+. +
T Consensus 300 SpDG~~i~f~s~~~g-~~~I~~~~~~~~~----~~~l~~~-~--~~~~~SpDG~~ia~~~~----~~i~~~Dl~~g~~-~ 366 (429)
T PRK01742 300 SPDGQSILFTSDRSG-SPQVYRMSASGGG----ASLVGGR-G--YSAQISADGKTLVMING----DNVVKQDLTSGST-E 366 (429)
T ss_pred CCCCCEEEEEECCCC-CceEEEEECCCCC----eEEecCC-C--CCccCCCCCCEEEEEcC----CCEEEEECCCCCe-E
Confidence 999999999988654 4579999987654 2333322 2 12222345566666543 3588899988875 3
Q ss_pred eeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 391 SFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 391 ~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++.. .....++++|++..+++... ...-..++..+.
T Consensus 367 ~lt~~-~~~~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~ 403 (429)
T PRK01742 367 VLSST-FLDESPSISPNGIMIIYSST-QGLGKVLQLVSA 403 (429)
T ss_pred EecCC-CCCCCceECCCCCEEEEEEc-CCCceEEEEEEC
Confidence 44422 12235678899987776643 333344566666
No 55
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.62 E-value=1.3e-14 Score=138.75 Aligned_cols=195 Identities=16% Similarity=0.174 Sum_probs=124.9
Q ss_pred eEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc--hhhhccccccCCCchh
Q psy4818 473 PMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE--DWHNAGRLLKKQNCFD 550 (734)
Q Consensus 473 ~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~--~~~~~~~~~~~~~~~~ 550 (734)
...+|.|++.. .++.|+||.+||+.+......-...+..+.+++||+|+.|+-........ .|.. .....+..+..
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~~ 79 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDVA 79 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccchh
Confidence 45788898753 35789999999986654321111124466777899999998543222222 3444 22223445566
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHH
Q psy4818 551 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHF 630 (734)
Q Consensus 551 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~ 630 (734)
.+.+.+++++.+.-+|++||.+.|.|+||.|+..++..+||+|+|+...+|+.--.... .........-|....+...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~--~~~a~~~m~~g~~~~p~~~ 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAAS--GASALSAMRSGPRPAPAAA 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccC--cccHHHHhhCCCCCChHHH
Confidence 67788999999888999999999999999999999999999999998887754211100 0000000111222222211
Q ss_pred HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 631 HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 631 ~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
......+. ..| .+| ++|+||+.|..|.+....++.+.+...
T Consensus 158 ~~a~~~~g----~~~----~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 158 WGARSDAG----AYP----GYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHhhhhcc----CCC----CCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 11111111 011 235 889999999999999999999988775
No 56
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.61 E-value=1.2e-13 Score=150.54 Aligned_cols=244 Identities=15% Similarity=0.145 Sum_probs=159.4
Q ss_pred CCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEE
Q psy4818 150 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 229 (734)
Q Consensus 150 SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (734)
...+.+++|....++.....|+++|..++.....+..+.....+.|||||+.|+|+.... ...+|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~-------------~~~~i~v 218 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES-------------GKPEIYV 218 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC-------------CCcEEEE
Confidence 445788999887654556889999998765444333332236789999999999987532 2357999
Q ss_pred EECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccce-EE
Q psy4818 230 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HE 308 (734)
Q Consensus 230 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~-~~ 308 (734)
+++.++... .+... ......+.|||||+.|++..... ...+||++++.++. ...+....... ..
T Consensus 219 ~d~~~g~~~--~~~~~---~~~~~~~~~spDg~~l~~~~~~~-~~~~i~~~d~~~~~---------~~~l~~~~~~~~~~ 283 (417)
T TIGR02800 219 QDLATGQRE--KVASF---PGMNGAPAFSPDGSKLAVSLSKD-GNPDIYVMDLDGKQ---------LTRLTNGPGIDTEP 283 (417)
T ss_pred EECCCCCEE--EeecC---CCCccceEECCCCCEEEEEECCC-CCccEEEEECCCCC---------EEECCCCCCCCCCE
Confidence 999876432 22221 11234689999999999876542 33689999998732 22232221111 22
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 309 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 309 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
.|++||++|+|.+++.+ ..+||.+++++++ ++.+.... .........++++.+++.....+..+|+++|+.++..
T Consensus 284 ~~s~dg~~l~~~s~~~g-~~~iy~~d~~~~~---~~~l~~~~-~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 284 SWSPDGKSIAFTSDRGG-SPQIYMMDADGGE---VRRLTFRG-GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred EECCCCCEEEEEECCCC-CceEEEEECCCCC---EEEeecCC-CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 48999999999988754 4479999998765 45555443 2222233334556677766655667899999976554
Q ss_pred eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 389 LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 389 ~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++.. ......+++++++.+++....... ..++.++.
T Consensus 359 -~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~ 396 (417)
T TIGR02800 359 -RVLTDT-GLDESPSFAPNGRMILYATTRGGR-GVLGLVST 396 (417)
T ss_pred -EEccCC-CCCCCceECCCCCEEEEEEeCCCc-EEEEEEEC
Confidence 555433 223345678899888887765443 56777776
No 57
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.61 E-value=2.7e-14 Score=145.52 Aligned_cols=242 Identities=18% Similarity=0.160 Sum_probs=154.8
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
..+..+.+.||..+....+.+.. .+..+||.+||....... |.. ++..|..+||.|+..|.||.|...+ ..
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~r--y~~-la~~l~~~G~~V~~~D~RGhG~S~r--~~ 79 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSGR--YEE-LADDLAARGFDVYALDLRGHGRSPR--GQ 79 (298)
T ss_pred cccceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHHH--HHH-HHHHHHhCCCEEEEecCCCCCCCCC--CC
Confidence 34555678899988888877654 233799999997543322 222 4566777899999999999776642 11
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCC--CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc---cccc--
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKY--TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR---FNKF-- 611 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---~~~~-- 611 (734)
......|+|....++.+++.-. .-..++.++||||||++++.++.+++..+.++|+.+|++.+.. ....
T Consensus 80 ----rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~ 155 (298)
T COG2267 80 ----RGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILAR 155 (298)
T ss_pred ----cCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHH
Confidence 1112336666666666555422 1235899999999999999999999999999999999987762 1100
Q ss_pred ---ccCccccccc--CC-------C----CCHHHHHHHHhCCcc------------------C--CC-CCCCCCccCCcE
Q psy4818 612 ---TIAYYSESEF--GS-------P----NNKTHFHNLLSYSPL------------------H--NI-KVPPNNTQYPAT 654 (734)
Q Consensus 612 ---~~~~~~~~~~--g~-------~----~~~~~~~~~~~~sp~------------------~--~~-~~p~~~~~~P~~ 654 (734)
.....+...+ +. . .+++..+.+ .-+|+ . .. ..+ .++.| +
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~-~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~--~~~~P-v 231 (298)
T COG2267 156 LALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY-EADPLIGVGGPVSRWVDLALLAGRVPALRDAP--AIALP-V 231 (298)
T ss_pred HhcccccccccccccCcccccCcCcchhhcCHHHHHHH-hcCCccccCCccHHHHHHHHHhhcccchhccc--cccCC-E
Confidence 0000010111 00 0 122222111 11221 0 00 011 36778 9
Q ss_pred EEEecCCCCCCC-ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHHcC
Q psy4818 655 LVLTGDHDDRVP-PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 655 Li~~g~~D~~v~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~l~ 726 (734)
||++|+.|.+|+ .....++++++... ..++++++++.|....... .+.+.++++.+||.+++.
T Consensus 232 Lll~g~~D~vv~~~~~~~~~~~~~~~~---------~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 232 LLLQGGDDRVVDNVEGLARFFERAGSP---------DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred EEEecCCCccccCcHHHHHHHHhcCCC---------CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 999999999999 67777777666432 2689999999998754332 126788889999998764
No 58
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.61 E-value=1.7e-14 Score=161.43 Aligned_cols=135 Identities=15% Similarity=0.110 Sum_probs=104.7
Q ss_pred EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-CccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 465 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 465 ~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
++.||.+|.+.+++|++ .++.|+||++||...... ...+......+|+++||+|+++|+||.|+.+..+...
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~---- 74 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL---- 74 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec----
Confidence 56899999999999975 357899999997533221 0112222235566789999999999977665433221
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
.....+|+.++++|+.++.+.+ .+|+++|+|+||++++.++.++|+.++++|+.+++.|+.+.
T Consensus 75 -~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 -GSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred -CcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 1457899999999999988776 69999999999999999999989999999999999887753
No 59
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.61 E-value=1.4e-14 Score=153.48 Aligned_cols=208 Identities=17% Similarity=0.111 Sum_probs=147.6
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
.+.+.++|..++|.....++. +.+|+.+...+..+++++.+.. ...++|||||++|||+..+.|+ .+||+
T Consensus 197 ~p~ws~~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~i~~~~g~-------~~~P~fspDG~~l~f~~~rdg~--~~iy~ 266 (425)
T COG0823 197 TPAWSPDGKKLAYVSFELGGC-PRIYYLDLNTGKRPVILNFNGN-------NGAPAFSPDGSKLAFSSSRDGS--PDIYL 266 (425)
T ss_pred ccccCcCCCceEEEEEecCCC-ceEEEEeccCCccceeeccCCc-------cCCccCCCCCCEEEEEECCCCC--ccEEE
Confidence 577778998888877655332 6688888777777888875533 4579999999999999998876 89999
Q ss_pred EECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeE
Q psy4818 173 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 252 (734)
Q Consensus 173 ~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~ 252 (734)
+|+.++.....+........+.|||||++|+|+++.. ...+||++++++.+.+. +.+.... .
T Consensus 267 ~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~-------------G~p~I~~~~~~g~~~~r-iT~~~~~----~ 328 (425)
T COG0823 267 MDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRG-------------GRPQIYLYDLEGSQVTR-LTFSGGG----N 328 (425)
T ss_pred EcCCCCcceecccCCccccCccCCCCCCEEEEEeCCC-------------CCcceEEECCCCCceeE-eeccCCC----C
Confidence 9999988544343333336899999999999998632 33489999999887632 2332221 1
Q ss_pred EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEE
Q psy4818 253 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 332 (734)
Q Consensus 253 ~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 332 (734)
..+.|||||++|+|..... ....|.+.++.++. .++.+..........|+++|+.+.|.+... ....|+.
T Consensus 329 ~~p~~SpdG~~i~~~~~~~-g~~~i~~~~~~~~~--------~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~-~~~~l~~ 398 (425)
T COG0823 329 SNPVWSPDGDKIVFESSSG-GQWDIDKNDLASGG--------KIRILTSTYLNESPSWAPNGRMIMFSSGQG-GGSVLSL 398 (425)
T ss_pred cCccCCCCCCEEEEEeccC-CceeeEEeccCCCC--------cEEEccccccCCCCCcCCCCceEEEeccCC-CCceEEE
Confidence 2689999999999988442 22567888887732 144444433333334999999999988765 3455777
Q ss_pred EecCCC
Q psy4818 333 INLNNP 338 (734)
Q Consensus 333 ~d~~~~ 338 (734)
++..+.
T Consensus 399 ~s~~g~ 404 (425)
T COG0823 399 VSLDGR 404 (425)
T ss_pred eeccce
Confidence 776654
No 60
>KOG4391|consensus
Probab=99.61 E-value=1.1e-14 Score=131.67 Aligned_cols=234 Identities=15% Similarity=0.171 Sum_probs=163.6
Q ss_pred CCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 453 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 453 ~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
+..+++-|++...+.|..+++++++..+ ...|+++|+|+.-|. ++ .+.+...-++.+.+..|++++||| |
T Consensus 48 ~~~n~pye~i~l~T~D~vtL~a~~~~~E-----~S~pTlLyfh~NAGN-mG-hr~~i~~~fy~~l~mnv~ivsYRG---Y 117 (300)
T KOG4391|consen 48 KEFNMPYERIELRTRDKVTLDAYLMLSE-----SSRPTLLYFHANAGN-MG-HRLPIARVFYVNLKMNVLIVSYRG---Y 117 (300)
T ss_pred cccCCCceEEEEEcCcceeEeeeeeccc-----CCCceEEEEccCCCc-cc-chhhHHHHHHHHcCceEEEEEeec---c
Confidence 3456788999999999999999999843 378999999986433 22 222333345667899999999999 5
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 612 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 612 (734)
|..=..+ ....-.-|-.++++||..+...|..+|.++|.|.||..+..++..+-++..|+|...-|+++....-..
T Consensus 118 G~S~Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 118 GKSEGSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred ccCCCCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe
Confidence 5321111 112234589999999999999999999999999999999999999999999999998888764432111
Q ss_pred c---CcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC
Q psy4818 613 I---AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 613 ~---~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~ 689 (734)
. +..+...|. ++ ..++-+..+.. .+.| .|++.|..|..|||-+..++++.-...
T Consensus 194 v~p~~~k~i~~lc-------~k--n~~~S~~ki~~----~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~--------- 250 (300)
T KOG4391|consen 194 VFPFPMKYIPLLC-------YK--NKWLSYRKIGQ----CRMP-FLFISGLKDELVPPVMMRQLYELCPSR--------- 250 (300)
T ss_pred eccchhhHHHHHH-------HH--hhhcchhhhcc----ccCc-eEEeecCccccCCcHHHHHHHHhCchh---------
Confidence 0 000001110 00 02233334443 5666 999999999999999998888866544
Q ss_pred cEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 690 PLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 690 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
..++..||++.|.-...-. -.++.+-+||.+...
T Consensus 251 ~Krl~eFP~gtHNDT~i~d---GYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWICD---GYFQAIEDFLAEVVK 284 (300)
T ss_pred hhhheeCCCCccCceEEec---cHHHHHHHHHHHhcc
Confidence 3468899999997543221 234456678877654
No 61
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.59 E-value=3.6e-14 Score=139.00 Aligned_cols=191 Identities=20% Similarity=0.211 Sum_probs=111.9
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHH-HHHhcCeEEEEEeccc------CCCCCchhhhccccccC-CCchhHHHHH-
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRHFNGIYAIPNIRG------GGELGEDWHNAGRLLKK-QNCFDDFQAA- 555 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~~G~~v~~~~~rG------~~~~g~~~~~~~~~~~~-~~~~~D~~~~- 555 (734)
+...|+||++||- |... ..+.. ... .+......++.++-+- +|....+|+........ ....+++..+
T Consensus 11 ~~~~~lvi~LHG~-G~~~-~~~~~-~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSE-DLFAL-LAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp ST-SEEEEEE--T-TS-H-HHHHH-HHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCceEEEEECCC-CCCc-chhHH-HHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 3678999999996 3332 22211 112 1222367777665431 12223378764322211 1223333332
Q ss_pred ------HHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHH
Q psy4818 556 ------AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTH 629 (734)
Q Consensus 556 ------~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~ 629 (734)
++.+++.+ ++++||.+.|+|.||.+++.++.++|+.|+++|+.+|.+-.... + .
T Consensus 88 ~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------~---------~-- 147 (216)
T PF02230_consen 88 ERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------L---------E-- 147 (216)
T ss_dssp HHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------C---------H--
T ss_pred HHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------c---------c--
Confidence 33333334 89999999999999999999999999999999999986632110 0 0
Q ss_pred HHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHH
Q psy4818 630 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMK 709 (734)
Q Consensus 630 ~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 709 (734)
...... .+.| +|++||..|++||...+++.++.|++. +.++++..|++.||.+.
T Consensus 148 ----------~~~~~~---~~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~-------~~~v~~~~~~g~gH~i~----- 201 (216)
T PF02230_consen 148 ----------DRPEAL---AKTP-ILIIHGDEDPVVPFEWAEKTAEFLKAA-------GANVEFHEYPGGGHEIS----- 201 (216)
T ss_dssp ----------CCHCCC---CTS--EEEEEETT-SSSTHHHHHHHHHHHHCT-------T-GEEEEEETT-SSS-------
T ss_pred ----------cccccc---CCCc-EEEEecCCCCcccHHHHHHHHHHHHhc-------CCCEEEEEcCCCCCCCC-----
Confidence 000110 1234 999999999999999999999999998 88999999999999885
Q ss_pred hHHHHHHHHHHHHHHc
Q psy4818 710 SIEEMTDIYVFLMKSL 725 (734)
Q Consensus 710 ~~~~~~~~~~fl~~~l 725 (734)
.++...+.+||.+++
T Consensus 202 -~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 202 -PEELRDLREFLEKHI 216 (216)
T ss_dssp -HHHHHHHHHHHHHH-
T ss_pred -HHHHHHHHHHHhhhC
Confidence 255667889998874
No 62
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.56 E-value=1.3e-14 Score=147.51 Aligned_cols=214 Identities=18% Similarity=0.151 Sum_probs=134.3
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc---CCc-cccHH---HHHHHHhcCeEEEEEecccCCCCCchhhhcc
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLP-TFSIS---RCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 540 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~-~~~~~---~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~ 540 (734)
||++|.+.+++| +...+++.|+||..++-.... ... ...+. ....++++||+|++.|.||.++.+..|...
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 799999999999 444578999999987643211 000 00110 011255679999999999977666554432
Q ss_pred ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc-ccc------ccc
Q psy4818 541 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR-FNK------FTI 613 (734)
Q Consensus 541 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-~~~------~~~ 613 (734)
..++.+|..++|+|+.++.+.+ .||+++|.||+|+.+..++.+.|...+|++..++..|+.. ... ...
T Consensus 79 ----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~ 153 (272)
T PF02129_consen 79 ----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGF 153 (272)
T ss_dssp ----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCH
T ss_pred ----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccc
Confidence 4557899999999999997765 6999999999999999999977778899999999998876 210 000
Q ss_pred Ccccc------cccCC-C-CCHHH------------------------H----------HHHHhCCccCCCCCCCCCccC
Q psy4818 614 AYYSE------SEFGS-P-NNKTH------------------------F----------HNLLSYSPLHNIKVPPNNTQY 651 (734)
Q Consensus 614 ~~~~~------~~~g~-~-~~~~~------------------------~----------~~~~~~sp~~~~~~p~~~~~~ 651 (734)
...|. ..... + ...+. . +++.+.++..++.+ ++.
T Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~----i~v 229 (272)
T PF02129_consen 154 FAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDK----IDV 229 (272)
T ss_dssp HHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG------S
T ss_pred hhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhh----CCC
Confidence 11220 00000 0 00000 0 11122222222333 777
Q ss_pred CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCCC
Q psy4818 652 PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHG 702 (734)
Q Consensus 652 P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~gH~ 702 (734)
| +|+++|-.|.... .++.+.+++|++. + ++..|++-| -+|+
T Consensus 230 P-~l~v~Gw~D~~~~-~~~~~~~~~l~~~-------~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 230 P-VLIVGGWYDTLFL-RGALRAYEALRAP-------GSKPQRLIIGP-WTHG 271 (272)
T ss_dssp E-EEEEEETTCSSTS-HHHHHHHHHHCTT-------STC-EEEEEES-ESTT
T ss_pred C-EEEecccCCcccc-hHHHHHHHHhhcC-------CCCCCEEEEeC-CCCC
Confidence 7 9999999997777 8999999999887 6 677888866 4664
No 63
>PRK10985 putative hydrolase; Provisional
Probab=99.56 E-value=1.2e-13 Score=144.38 Aligned_cols=242 Identities=14% Similarity=0.074 Sum_probs=139.1
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
.++..++..||..+......... .....|+||++||..+..... +...+...|.++||.|+++|+||.|+.......
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNSP-YAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcCH-HHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 33444667888776554332111 234579999999986654332 333345667778999999999996643211111
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc--eeEEEEcCCcchhcccc-------
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL--YGAALILVGALDMLRFN------- 609 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~~~------- 609 (734)
.......+|+..+++++.++. ...++.++|+|+||.+++.++.++++. ++++|+.++..++....
T Consensus 108 ----~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~ 181 (324)
T PRK10985 108 ----IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGF 181 (324)
T ss_pred ----eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhH
Confidence 111234789999999998753 335799999999999888877766543 67766666654432100
Q ss_pred ----cc----c----c---Ccccc----------------ccc----CCC--CCHHHHHHHHhCCccCCCCCCCCCccCC
Q psy4818 610 ----KF----T----I---AYYSE----------------SEF----GSP--NNKTHFHNLLSYSPLHNIKVPPNNTQYP 652 (734)
Q Consensus 610 ----~~----~----~---~~~~~----------------~~~----g~~--~~~~~~~~~~~~sp~~~~~~p~~~~~~P 652 (734)
.. . . ...|. .+| ..+ ......+++...++...++. ++.|
T Consensus 182 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~----i~~P 257 (324)
T PRK10985 182 SRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQ----IRKP 257 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhC----CCCC
Confidence 00 0 0 00000 000 000 00111233334444444443 7777
Q ss_pred cEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc----hHHhHHHHHHHHHHHHHHcC
Q psy4818 653 ATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP----LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 653 ~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l~ 726 (734)
+|+++|++|+.+++.....+ .+. ...+.+.+.+++||...-. ... .-....+.+||...++
T Consensus 258 -~lii~g~~D~~~~~~~~~~~----~~~-------~~~~~~~~~~~~GH~~~~~g~~~~~~-~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 258 -TLIIHAKDDPFMTHEVIPKP----ESL-------PPNVEYQLTEHGGHVGFVGGTLLKPQ-MWLEQRIPDWLTTYLE 322 (324)
T ss_pred -EEEEecCCCCCCChhhChHH----HHh-------CCCeEEEECCCCCceeeCCCCCCCCC-ccHHHHHHHHHHHhhc
Confidence 99999999999987655443 222 2346778889999953211 111 1122347888877654
No 64
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.56 E-value=2e-13 Score=141.71 Aligned_cols=236 Identities=14% Similarity=0.118 Sum_probs=134.4
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.+...+|.++...+. ..+ .+..|.||++||.+..... |.. ....|.++||.|+++|.||.|.....
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~-~~G---~~~~~~lvliHG~~~~~~~--w~~-~~~~L~~~gy~vi~~Dl~G~G~S~~~-- 90 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYV-DEG---PADGPPVLLLHGEPSWSYL--YRK-MIPILAAAGHRVIAPDLIGFGRSDKP-- 90 (302)
T ss_pred CceeEeecCCCCceEEEEEE-ecC---CCCCCEEEEECCCCCchhh--HHH-HHHHHHhCCCEEEEECCCCCCCCCCC--
Confidence 45566666656665554332 222 1235789999997544433 333 34567666999999999995532110
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc------c---
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR------F--- 608 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~------~--- 608 (734)
.......+++..+.+..++++ ++.+++.++|||+||.++..++.++|++++++|+.++..-... +
T Consensus 91 ----~~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 164 (302)
T PRK00870 91 ----TRREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAW 164 (302)
T ss_pred ----CCcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhh
Confidence 011223566666665555554 3445799999999999999999999999999988765321000 0
Q ss_pred cccc--cCcc----c-------------ccccCCCCCHHHH----HHHHh---CCcc-----------CCCCCCCCCccC
Q psy4818 609 NKFT--IAYY----S-------------ESEFGSPNNKTHF----HNLLS---YSPL-----------HNIKVPPNNTQY 651 (734)
Q Consensus 609 ~~~~--~~~~----~-------------~~~~g~~~~~~~~----~~~~~---~sp~-----------~~~~~p~~~~~~ 651 (734)
..+. .... + ...|..+...+.. ..+.. ..+. ..+. .+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~ 240 (302)
T PRK00870 165 RAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLE----RWDK 240 (302)
T ss_pred hcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhh----cCCC
Confidence 0000 0000 0 0001000000000 00000 0000 0112 2778
Q ss_pred CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 652 PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 652 P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
| +||++|++|..++... .++.+.+.+. .-+.+.+++++||...-... .+....+.+||.++
T Consensus 241 P-~lii~G~~D~~~~~~~-~~~~~~~~~~--------~~~~~~~i~~~gH~~~~e~p--~~~~~~l~~fl~~~ 301 (302)
T PRK00870 241 P-FLTAFSDSDPITGGGD-AILQKRIPGA--------AGQPHPTIKGAGHFLQEDSG--EELAEAVLEFIRAT 301 (302)
T ss_pred c-eEEEecCCCCcccCch-HHHHhhcccc--------cccceeeecCCCccchhhCh--HHHHHHHHHHHhcC
Confidence 8 9999999999999755 6665555432 11246788999998764433 36666788888654
No 65
>PLN02511 hydrolase
Probab=99.55 E-value=2.3e-13 Score=145.16 Aligned_cols=247 Identities=17% Similarity=0.103 Sum_probs=143.1
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..++..+...||..+....+.+.........|+||++||..+.+.. .|.......+.++||.|+++|+||.|+...
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~-~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~--- 145 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDD-SYVRHMLLRARSKGWRVVVFNSRGCADSPV--- 145 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHCCCEEEEEecCCCCCCCC---
Confidence 4455667778998887655543221123457899999998766543 232223333445799999999999654321
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc--eeEEEEcCCcchhcc-c---cc-
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL--YGAALILVGALDMLR-F---NK- 610 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~-~---~~- 610 (734)
.. .........+|+.+++++|..+. ...++.++|+|+||.+++.++.++|+. +.++++.++-.++.. . ..
T Consensus 146 ~~-~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~ 222 (388)
T PLN02511 146 TT-PQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG 222 (388)
T ss_pred CC-cCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc
Confidence 00 01112345789999999997652 235799999999999999999998875 566665554333310 0 00
Q ss_pred c------ccC----------c-------ccc-----------ccc----CCC--CCHHHHHHHHhCCccCCCCCCCCCcc
Q psy4818 611 F------TIA----------Y-------YSE-----------SEF----GSP--NNKTHFHNLLSYSPLHNIKVPPNNTQ 650 (734)
Q Consensus 611 ~------~~~----------~-------~~~-----------~~~----g~~--~~~~~~~~~~~~sp~~~~~~p~~~~~ 650 (734)
+ ... . .+. .+| ..+ .....-+++...|+...+.. ++
T Consensus 223 ~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~----I~ 298 (388)
T PLN02511 223 FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKH----VR 298 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhcc----CC
Confidence 0 000 0 000 000 000 00000112344555555654 88
Q ss_pred CCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHh----HHHHHHHHHHHHHHcC
Q psy4818 651 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKS----IEEMTDIYVFLMKSLG 726 (734)
Q Consensus 651 ~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~----~~~~~~~~~fl~~~l~ 726 (734)
.| +||++|.+|+.+|...... .+.+. ...+.+.+.+++||...-..... --....+.+||.....
T Consensus 299 vP-tLiI~g~dDpi~p~~~~~~---~~~~~-------~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 299 VP-LLCIQAANDPIAPARGIPR---EDIKA-------NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CC-eEEEEcCCCCcCCcccCcH---hHHhc-------CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 88 9999999999998764311 11122 34568899999999653221110 0123456788877653
No 66
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.54 E-value=1.5e-13 Score=141.01 Aligned_cols=238 Identities=16% Similarity=0.157 Sum_probs=140.8
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+..+++.++-.+ ..|++++..|+. +++.|+||.+-| ..+-....+. .+...++.+|++++.+|.+|-|...
T Consensus 161 ~~~~i~~v~iP~eg-~~I~g~LhlP~~---~~p~P~VIv~gG-lDs~qeD~~~-l~~~~l~~rGiA~LtvDmPG~G~s~- 233 (411)
T PF06500_consen 161 SDYPIEEVEIPFEG-KTIPGYLHLPSG---EKPYPTVIVCGG-LDSLQEDLYR-LFRDYLAPRGIAMLTVDMPGQGESP- 233 (411)
T ss_dssp SSSEEEEEEEEETT-CEEEEEEEESSS---SS-EEEEEEE---TTS-GGGGHH-HHHCCCHHCT-EEEEE--TTSGGGT-
T ss_pred CCCCcEEEEEeeCC-cEEEEEEEcCCC---CCCCCEEEEeCC-cchhHHHHHH-HHHHHHHhCCCEEEEEccCCCcccc-
Confidence 35678999998754 889999999984 578898888644 3333322222 2334566789999999999966421
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc-hhccccc--c
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL-DMLRFNK--F 611 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d~~~~~~--~ 611 (734)
.|- ..+....-..++++||.+..++|++||+++|.|+||+++.+++..++++++|+|+..|++ ++++-.. .
T Consensus 234 ~~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~ 307 (411)
T PF06500_consen 234 KWP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQ 307 (411)
T ss_dssp TT-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHT
T ss_pred cCC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHh
Confidence 111 111222345678999999999999999999999999999999987778899999887754 3332100 0
Q ss_pred ccCc----ccccccCCCC--CHHHHHHHHhCCccCC-CC-CCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q psy4818 612 TIAY----YSESEFGSPN--NKTHFHNLLSYSPLHN-IK-VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 683 (734)
Q Consensus 612 ~~~~----~~~~~~g~~~--~~~~~~~~~~~sp~~~-~~-~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~ 683 (734)
..+. .+...+|... +......+.++|-..+ +- .. +.++| +|.+.+++|+.+|.+++.-++. .
T Consensus 308 ~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~r--r~~~p-lL~i~~~~D~v~P~eD~~lia~----~--- 377 (411)
T PF06500_consen 308 RVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGR--RCPTP-LLAINGEDDPVSPIEDSRLIAE----S--- 377 (411)
T ss_dssp TS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS---BSS--EEEEEETT-SSS-HHHHHHHHH----T---
T ss_pred cCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCC--CCCcc-eEEeecCCCCCCCHHHHHHHHh----c---
Confidence 1111 1113345432 2223345677777553 21 11 26677 9999999999999888654433 2
Q ss_pred CCCCCCcEEEEEeCCCC-CCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 684 LPYQKNPLLLRVEQDAG-HGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+.+-+...++... |.. . -+....++.||.+.|
T Consensus 378 ----s~~gk~~~~~~~~~~~g----y--~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 378 ----STDGKALRIPSKPLHMG----Y--PQALDEIYKWLEDKL 410 (411)
T ss_dssp ----BTT-EEEEE-SSSHHHH----H--HHHHHHHHHHHHHHH
T ss_pred ----CCCCceeecCCCccccc----h--HHHHHHHHHHHHHhc
Confidence 2333444555433 532 1 244566899998876
No 67
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.54 E-value=9.3e-14 Score=140.44 Aligned_cols=206 Identities=16% Similarity=0.150 Sum_probs=124.9
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
.+.|+||++||..+... .|. .....|.+ ||.|+++|+||.|..... ......++|....+..+++. .
T Consensus 11 ~~~~~iv~lhG~~~~~~--~~~-~~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~i~~--~ 77 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS--YWA-PQLDVLTQ-RFHVVTYDHRGTGRSPGE-------LPPGYSIAHMADDVLQLLDA--L 77 (257)
T ss_pred CCCCEEEEEcCCCcchh--HHH-HHHHHHHh-ccEEEEEcCCCCCCCCCC-------CcccCCHHHHHHHHHHHHHH--h
Confidence 35788999999765543 233 23456664 999999999996644311 01123456665555555443 3
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-----------c-cc------------cCccccccc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-----------K-FT------------IAYYSESEF 621 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-----------~-~~------------~~~~~~~~~ 621 (734)
+..++.++|+|+||++++.++.++|+.++++|+..++....... . .. ....|....
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISEN 157 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhcc
Confidence 45689999999999999999999999889988877654321000 0 00 000010000
Q ss_pred C------------C-CCCHH---HHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCC
Q psy4818 622 G------------S-PNNKT---HFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 622 g------------~-~~~~~---~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~ 685 (734)
. . ..... .+..+..++....+.. ++.| +|+++|++|..+|++++.++++.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~----- 227 (257)
T TIGR03611 158 AARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDR----IQHP-VLLIANRDDMLVPYTQSLRLAAALPNA----- 227 (257)
T ss_pred chhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcc----cCcc-EEEEecCcCcccCHHHHHHHHHhcCCc-----
Confidence 0 0 00000 0111122222223333 6677 999999999999999988887765432
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 686 YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
.++.++++||.+.-... .+....+.+||.
T Consensus 228 ------~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~ 256 (257)
T TIGR03611 228 ------QLKLLPYGGHASNVTDP--ETFNRALLDFLK 256 (257)
T ss_pred ------eEEEECCCCCCccccCH--HHHHHHHHHHhc
Confidence 67788999998765433 355556777764
No 68
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.53 E-value=1.6e-13 Score=143.26 Aligned_cols=234 Identities=15% Similarity=0.086 Sum_probs=136.5
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-----------------------cccHHHHHHHHhcCeE
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-----------------------TFSISRCMFLRHFNGI 520 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-----------------------~~~~~~~~~l~~~G~~ 520 (734)
+.+.||..|....+.|+ .+..+|+++||..+..... .|...++..|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56779999988888775 2456999999953332210 1223466778788999
Q ss_pred EEEEecccCCCCC-chhhhccccccCCCchhHHHHHHHHHHHc------------------CCCCCCcEEEEEcChHHHH
Q psy4818 521 YAIPNIRGGGELG-EDWHNAGRLLKKQNCFDDFQAAAEYMINK------------------KYTKPKYITIMGGSNGGLL 581 (734)
Q Consensus 521 v~~~~~rG~~~~g-~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~ri~i~G~S~GG~~ 581 (734)
|+++|.||.|... .... .+....-..-++|+...++.+.+. .+-....+.|+||||||.+
T Consensus 77 V~~~D~rGHG~S~~~~~~-~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNL-RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred EEEecccccCCCcccccc-ccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999977532 1110 000000011134455555544331 1111246999999999999
Q ss_pred HHHHHhcCCC--------ceeEEEEcCCcchhcccc-----------------------ccccCc-ccccccCCCCCHHH
Q psy4818 582 VGACLNQRPE--------LYGAALILVGALDMLRFN-----------------------KFTIAY-YSESEFGSPNNKTH 629 (734)
Q Consensus 582 ~~~~~~~~p~--------~~~a~v~~~~~~d~~~~~-----------------------~~~~~~-~~~~~~g~~~~~~~ 629 (734)
+..++.+.++ .++++|+.+|.+.+.... .+..+. .+.. .++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~-----~~~~~ 230 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYE-----KSPYV 230 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccc-----cChhh
Confidence 9998765432 578889888765432100 000000 0000 01111
Q ss_pred HHHHHhCCcc----------------------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCC
Q psy4818 630 FHNLLSYSPL----------------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 687 (734)
Q Consensus 630 ~~~~~~~sp~----------------------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~ 687 (734)
.+. ...+|+ ..+... ..+.| +|++||++|..|++..+.++++++..
T Consensus 231 ~~~-~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i--~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~-------- 298 (332)
T TIGR01607 231 NDI-IKFDKFRYDGGITFNLASELIKATDTLDCDIDYI--PKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSI-------- 298 (332)
T ss_pred hhH-HhcCccccCCcccHHHHHHHHHHHHHHHhhHhhC--CCCCC-EEEEEeCCCCccCHHHHHHHHHhccC--------
Confidence 000 011111 111110 02566 99999999999999988887776542
Q ss_pred CCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 688 KNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
....++++++++|....... +.+..+.+.+||.
T Consensus 299 -~~~~l~~~~g~~H~i~~E~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 299 -SNKELHTLEDMDHVITIEPG-NEEVLKKIIEWIS 331 (332)
T ss_pred -CCcEEEEECCCCCCCccCCC-HHHHHHHHHHHhh
Confidence 24577889999999876543 3567778889985
No 69
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.53 E-value=9.4e-14 Score=142.84 Aligned_cols=208 Identities=16% Similarity=0.055 Sum_probs=118.5
Q ss_pred CCcEEEEecCCCCCcCCcc-ccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
..|.||++||.......+. +...+.. +.+.||.|+++|+||.|........ ........+|+.+.++.+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~-l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l------ 98 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGP-FVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL------ 98 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHH-HHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc------
Confidence 3467999999654433221 1122233 3446999999999996543211000 000001233444443332
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc------------ccc-ccCc--c---ccccc-CCC-C
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF------------NKF-TIAY--Y---SESEF-GSP-N 625 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~------------~~~-~~~~--~---~~~~~-g~~-~ 625 (734)
+.++++++|||+||+++..++.++|++++++|+.+|....... ... .... . +...+ -++ .
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 5568999999999999999999999999999987764211000 000 0000 0 00000 000 0
Q ss_pred -C--------------HHHHHHHH-h--CCcc------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q psy4818 626 -N--------------KTHFHNLL-S--YSPL------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 681 (734)
Q Consensus 626 -~--------------~~~~~~~~-~--~sp~------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~ 681 (734)
. ++....+. . ..++ ..++. +++| +|+++|++|..|++..+.++++.+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vlli~G~~D~~v~~~~~~~~~~~~~~-- 251 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGE----IKAK-TLVTWGRDDRFVPLDHGLKLLWNMPD-- 251 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhh----CCCC-EEEEEccCCCcCCchhHHHHHHhCCC--
Confidence 0 01111111 0 1111 11222 7788 99999999999999888888776653
Q ss_pred CCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 682 GSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+++++++++||....... .+..+.+.+||.
T Consensus 252 ---------~~~~~i~~agH~~~~e~p--~~~~~~i~~fl~ 281 (282)
T TIGR03343 252 ---------AQLHVFSRCGHWAQWEHA--DAFNRLVIDFLR 281 (282)
T ss_pred ---------CEEEEeCCCCcCCcccCH--HHHHHHHHHHhh
Confidence 377889999999865544 355566778874
No 70
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.52 E-value=4e-13 Score=128.96 Aligned_cols=230 Identities=15% Similarity=0.140 Sum_probs=148.6
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc---
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK--- 544 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~--- 544 (734)
+|.+-+.+++.|.+.+ .+.|+||++||+.++.....-...+-.+.++.||.|+.|| ++...|...+...+
T Consensus 43 ~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~p 115 (312)
T COG3509 43 NGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFGP 115 (312)
T ss_pred CCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCCc
Confidence 5677899999999863 4459999999987664322212234456677899999993 46667755444433
Q ss_pred -----CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc-hhc-cccccccCccc
Q psy4818 545 -----KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL-DML-RFNKFTIAYYS 617 (734)
Q Consensus 545 -----~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d~~-~~~~~~~~~~~ 617 (734)
+..++..+.+.+..|+.+.-+||.||.|.|.|+||.|+.+++..+|++|.++...++.. +-. ....... ..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~--~~ 193 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPV--SV 193 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCch--hH
Confidence 33456677888999999888999999999999999999999999999999998888765 211 1111000 00
Q ss_pred ccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC--------------
Q psy4818 618 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS-------------- 683 (734)
Q Consensus 618 ~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~-------------- 683 (734)
+..-|.++. ..|++-=. .| |-+|..|..|+..+..+..+++.....-
T Consensus 194 m~~~G~~Dp---------~~p~~gG~-------~~---~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~ 254 (312)
T COG3509 194 MAFHGTADP---------LNPYHGGG-------VP---IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTD 254 (312)
T ss_pred HHhcCCCCC---------CCCCCCCC-------cc---cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccce
Confidence 011122211 12332211 11 6788888877555555555555332100
Q ss_pred --CCCCCCcEEEEEeCCCCCCCCCchHH----------hHHHHHHHHHHHHHHc
Q psy4818 684 --LPYQKNPLLLRVEQDAGHGQGTPLMK----------SIEEMTDIYVFLMKSL 725 (734)
Q Consensus 684 --~~~~~~~~~~~~~~~~gH~~~~~~~~----------~~~~~~~~~~fl~~~l 725 (734)
-..++.++++..+.+.||........ .+.....+.+|+..+-
T Consensus 255 ~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~ 308 (312)
T COG3509 255 YDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQHR 308 (312)
T ss_pred eeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhcc
Confidence 01235789999999999987642211 2445667888988763
No 71
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.51 E-value=2.4e-12 Score=135.93 Aligned_cols=253 Identities=16% Similarity=0.179 Sum_probs=150.8
Q ss_pred CCCCcEEEEEEeCCC----CceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 150 SDNGKHFAYCLSKSG----SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 150 SPDG~~la~~~~~~g----~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
||||+++++..+... +-...++++|+++++..+..........+.|||||+.|+|++..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~----------------- 63 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDN----------------- 63 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETT-----------------
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecC-----------------
Confidence 899999999776421 22368999999999865544443344789999999999999842
Q ss_pred EEEEEECCCCCCCCeeEEec--------CC-----C-CeeEEEEEEecCCcEEEEEEecCCCC-----------------
Q psy4818 226 KIYYHVLGTEQDKDIPVVEF--------PN-----G-RSLGLHSEVTDCGRYLLVSTSNNTQG----------------- 274 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~--------~~-----~-~~~~~~~~~SpDG~~l~~~~~~~~~~----------------- 274 (734)
.||+.++.++... .+...+ ++ + -.....+.|||||++|+|...+....
T Consensus 64 nly~~~~~~~~~~-~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~ 142 (353)
T PF00930_consen 64 NLYLRDLATGQET-QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPE 142 (353)
T ss_dssp EEEEESSTTSEEE-ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-E
T ss_pred ceEEEECCCCCeE-EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCc
Confidence 5888876654221 111111 10 0 01124678999999999976322110
Q ss_pred ---------------ceEEEEeCCCCCCCcccCCCCcee-eeccccceEEE-EEecCCeEEE-EeCCCCCCceEEEEecC
Q psy4818 275 ---------------SDLHYFDLHSLPDGKISGKFPLKT-VIPGMDHHHEI-IANNGPELIV-KTTKNAPKGKVVTINLN 336 (734)
Q Consensus 275 ---------------~~i~~~d~~~~~~~~l~~~~~~~~-l~~~~~~~~~~-~s~dg~~l~~-~s~~~~~~~~l~~~d~~ 336 (734)
.+|++++++++....+. +.. +.........+ |++|++++++ ..++......|+.+|++
T Consensus 143 ~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~----~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~ 218 (353)
T PF00930_consen 143 VESIRYPKAGDPNPRVSLFVVDLASGKTTELD----PPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDAS 218 (353)
T ss_dssp EEEEE--BTTS---EEEEEEEESSSTCCCEE-------HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEEC
T ss_pred ccccccCCCCCcCCceEEEEEECCCCcEEEee----eccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECC
Confidence 26777777763221110 000 01111111223 9999985554 46787778889999998
Q ss_pred CCCCCCceEeecCCCCcee---EEE-EE-eeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEe-eccCcccce
Q psy4818 337 NPCEKNWKTLIPEDENRTL---DVV-AA-VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITH-ISGRRKYNE 410 (734)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~---~~~-~~-~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~-~~~~~d~~~ 410 (734)
++. .+.+..+....-+ ... .+ .+++.+++...++|..+|++++.. |...+.|+.....|.. +.++.+++.
T Consensus 219 tg~---~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~-~~~~~~lT~G~~~V~~i~~~d~~~~~ 294 (353)
T PF00930_consen 219 TGE---TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLD-GGKPRQLTSGDWEVTSILGWDEDNNR 294 (353)
T ss_dssp TTT---CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETT-SSEEEESS-SSS-EEEEEEEECTSSE
T ss_pred CCc---eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccc-ccceeccccCceeecccceEcCCCCE
Confidence 765 2333333222111 122 23 355788888889999999999995 5445788866555633 456677788
Q ss_pred EEEEEecCCCCc--eEEEEeC
Q psy4818 411 VFYGFTSFLQPG--TIYHCNI 429 (734)
Q Consensus 411 l~~~~ss~~~P~--~~~~~d~ 429 (734)
++|..+. ..|. .+|++++
T Consensus 295 iyf~a~~-~~p~~r~lY~v~~ 314 (353)
T PF00930_consen 295 IYFTANG-DNPGERHLYRVSL 314 (353)
T ss_dssp EEEEESS-GGTTSBEEEEEET
T ss_pred EEEEecC-CCCCceEEEEEEe
Confidence 8877665 3354 4888888
No 72
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.50 E-value=1.2e-12 Score=133.28 Aligned_cols=235 Identities=12% Similarity=0.006 Sum_probs=137.7
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-cccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
+.+.+.. +|..+.+++..|.+ ...+.||++|||+...... .....++..|+++||.|+++|+||.|......
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-- 75 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-- 75 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--
Confidence 4566764 56789999999864 2345777778876544322 11223456777789999999999966432110
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc--------
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-------- 610 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-------- 610 (734)
.......+|+.+++++|.++. ...++|+++|+|+||++++.++.. +..++++|+.+|.+.......
T Consensus 76 ----~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~ 149 (274)
T TIGR03100 76 ----LGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYY 149 (274)
T ss_pred ----CCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHH
Confidence 111234578999999987651 123579999999999999988765 567899999998753221100
Q ss_pred ---cccCccccccc-CCCCCHHHHHHHHh----CCccC--------------CCCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 611 ---FTIAYYSESEF-GSPNNKTHFHNLLS----YSPLH--------------NIKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 611 ---~~~~~~~~~~~-g~~~~~~~~~~~~~----~sp~~--------------~~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
...+..|...+ |.....+....+.. ..+.. .+.. ++.| +|+++|..|...+..
T Consensus 150 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~P-~ll~~g~~D~~~~~~ 224 (274)
T TIGR03100 150 LGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLER----FQGP-VLFILSGNDLTAQEF 224 (274)
T ss_pred HHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHh----cCCc-EEEEEcCcchhHHHH
Confidence 00011111111 11110100111111 11110 1111 5667 999999999764211
Q ss_pred H-----HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 669 H-----SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 669 ~-----~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
. +.++.+.+. ...+++..+++++|....... +.+..+.+.+||.
T Consensus 225 ~~~~~~~~~~~~~l~---------~~~v~~~~~~~~~H~l~~e~~-~~~v~~~i~~wL~ 273 (274)
T TIGR03100 225 ADSVLGEPAWRGALE---------DPGIERVEIDGADHTFSDRVW-REWVAARTTEWLR 273 (274)
T ss_pred HHHhccChhhHHHhh---------cCCeEEEecCCCCcccccHHH-HHHHHHHHHHHHh
Confidence 1 012222222 235788999999997754433 3577888999985
No 73
>PRK11071 esterase YqiA; Provisional
Probab=99.50 E-value=4e-13 Score=128.03 Aligned_cols=184 Identities=13% Similarity=0.038 Sum_probs=114.5
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHh--cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
|.||++||..++...+... .+..++.+ .+|.|+++|.||. + ++..+.+..++++. +
T Consensus 2 p~illlHGf~ss~~~~~~~-~~~~~l~~~~~~~~v~~~dl~g~---~----------------~~~~~~l~~l~~~~--~ 59 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKAT-LLKNWLAQHHPDIEMIVPQLPPY---P----------------ADAAELLESLVLEH--G 59 (190)
T ss_pred CeEEEECCCCCCcchHHHH-HHHHHHHHhCCCCeEEeCCCCCC---H----------------HHHHHHHHHHHHHc--C
Confidence 6899999976555432211 13355544 3799999999983 2 24555566666552 3
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccC--CCCCHHHHHHHHhCCccCCCCC
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFG--SPNNKTHFHNLLSYSPLHNIKV 644 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~sp~~~~~~ 644 (734)
.+++.++|+|+||++++.++.++|. + +|+.+|..+.......-.+.......+ .+...+.++.++++.+.. ++
T Consensus 60 ~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i~- 134 (190)
T PRK11071 60 GDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDP-LE- 134 (190)
T ss_pred CCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCcc-CC-
Confidence 3579999999999999999999883 3 466676665322211101110000001 112234455555554433 33
Q ss_pred CCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 645 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 645 p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
...| ++|+||++|..||+.++.+++++. .+++.++++|.+... .+....+.+|+.
T Consensus 135 ----~~~~-v~iihg~~De~V~~~~a~~~~~~~--------------~~~~~~ggdH~f~~~----~~~~~~i~~fl~ 189 (190)
T PRK11071 135 ----SPDL-IWLLQQTGDEVLDYRQAVAYYAAC--------------RQTVEEGGNHAFVGF----ERYFNQIVDFLG 189 (190)
T ss_pred ----Chhh-EEEEEeCCCCcCCHHHHHHHHHhc--------------ceEEECCCCcchhhH----HHhHHHHHHHhc
Confidence 2333 899999999999999999998842 245669999999643 245556777763
No 74
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.50 E-value=4.2e-13 Score=120.10 Aligned_cols=199 Identities=20% Similarity=0.176 Sum_probs=128.1
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCC--CCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG--YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg--~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
.++.++..-|. +.+..-.++ ....|+.|..|=- ++..+.+.-....+..|.++||+++.+|+||-|..
T Consensus 5 ~~v~i~Gp~G~-le~~~~~~~----~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S----- 74 (210)
T COG2945 5 PTVIINGPAGR-LEGRYEPAK----TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRS----- 74 (210)
T ss_pred CcEEecCCccc-ceeccCCCC----CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccc-----
Confidence 34455444442 444333222 2456666666532 23333332222345667788999999999995543
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 617 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 617 (734)
+|..+.+..+.+|..+|++||.++.- +..-..+.|+|.|+++++.++.+.|+. ...|+..|..+...
T Consensus 75 -~G~fD~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~~d---------- 141 (210)
T COG2945 75 -QGEFDNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINAYD---------- 141 (210)
T ss_pred -cCcccCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCchh----------
Confidence 34455677789999999999988742 322357899999999999999998875 45566665554110
Q ss_pred ccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 618 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 618 ~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
+ +-+. | ...| .|+++|+.|++|.+...+++.+ +.+..+++.+
T Consensus 142 ------------f------s~l~----P---~P~~-~lvi~g~~Ddvv~l~~~l~~~~------------~~~~~~i~i~ 183 (210)
T COG2945 142 ------------F------SFLA----P---CPSP-GLVIQGDADDVVDLVAVLKWQE------------SIKITVITIP 183 (210)
T ss_pred ------------h------hhcc----C---CCCC-ceeEecChhhhhcHHHHHHhhc------------CCCCceEEec
Confidence 1 0011 1 3344 9999999998888776665554 3456788899
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 698 DAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 698 ~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+++|+|.... .+..+.+.+||.
T Consensus 184 ~a~HFF~gKl---~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFHGKL---IELRDTIADFLE 205 (210)
T ss_pred CCCceecccH---HHHHHHHHHHhh
Confidence 9999997543 344455677773
No 75
>PLN00021 chlorophyllase
Probab=99.49 E-value=4e-12 Score=130.15 Aligned_cols=225 Identities=18% Similarity=0.164 Sum_probs=139.1
Q ss_pred CCCCCceEEEEE--EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccC
Q psy4818 452 FEPTLFQTKQVY--FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG 529 (734)
Q Consensus 452 ~~~~~~~~~~~~--~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~ 529 (734)
|+...+.+.... +.+.-...+++.+++|.. .+.+|+||++||+..... .|. ..+..|+++||+|+++|++|.
T Consensus 17 ~~~g~~~~~~~~~~~~~~~~~~~p~~v~~P~~---~g~~PvVv~lHG~~~~~~--~y~-~l~~~Las~G~~VvapD~~g~ 90 (313)
T PLN00021 17 FETGKFPVELITVDESSRPSPPKPLLVATPSE---AGTYPVLLFLHGYLLYNS--FYS-QLLQHIASHGFIVVAPQLYTL 90 (313)
T ss_pred cccCCceeEEEEecCCCcCCCCceEEEEeCCC---CCCCCEEEEECCCCCCcc--cHH-HHHHHHHhCCCEEEEecCCCc
Confidence 444444444433 322334578999999975 578999999999855422 232 345667778999999999873
Q ss_pred CCCCchhhhccccccCCCchhHHHHHHHHHHHc--------CCCCCCcEEEEEcChHHHHHHHHHhcCCC-----ceeEE
Q psy4818 530 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK--------KYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAA 596 (734)
Q Consensus 530 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~~~a~ 596 (734)
+.. .....++|..++++|+.+. ...|+++++|+|||+||++++.++.++++ .|+++
T Consensus 91 ~~~-----------~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~al 159 (313)
T PLN00021 91 AGP-----------DGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSAL 159 (313)
T ss_pred CCC-----------CchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeE
Confidence 211 1123456677777777652 23678899999999999999999988775 57888
Q ss_pred EEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCC-----CCC----C
Q psy4818 597 LILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDD-----RVP----P 667 (734)
Q Consensus 597 v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~-----~v~----~ 667 (734)
|...|+..+.... .+ .|.. ..+.| +.. ++..| +||+++..|. .+| .
T Consensus 160 i~ldPv~g~~~~~-~~----------~p~i-------l~~~~--~s~----~~~~P-~liig~g~~~~~~~~~~p~~ap~ 214 (313)
T PLN00021 160 IGLDPVDGTSKGK-QT----------PPPV-------LTYAP--HSF----NLDIP-VLVIGTGLGGEPRNPLFPPCAPD 214 (313)
T ss_pred Eeecccccccccc-CC----------CCcc-------cccCc--ccc----cCCCC-eEEEecCCCcccccccccccCCC
Confidence 8888875432110 00 0100 01111 111 14556 8999888663 222 3
Q ss_pred h-HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC--------------------Cch-HHhHHHHHHHHHHHHHHc
Q psy4818 668 L-HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG--------------------TPL-MKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 668 ~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~--------------------~~~-~~~~~~~~~~~~fl~~~l 725 (734)
. +-.+++.+. ..+..+.+.+++||.-. ..+ ..+......+.+||..+|
T Consensus 215 ~~~~~~f~~~~----------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l 284 (313)
T PLN00021 215 GVNHAEFFNEC----------KAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYL 284 (313)
T ss_pred CCCHHHHHHhc----------CCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3 236666554 44678888899999532 001 112233445799999999
Q ss_pred CCC
Q psy4818 726 GLK 728 (734)
Q Consensus 726 ~~~ 728 (734)
..+
T Consensus 285 ~~~ 287 (313)
T PLN00021 285 EGD 287 (313)
T ss_pred cCc
Confidence 654
No 76
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.49 E-value=1.4e-13 Score=130.56 Aligned_cols=174 Identities=13% Similarity=0.126 Sum_probs=121.3
Q ss_pred CCCcEEeEEEEEeccccCCCCC-cEEEEecCCCCCcCCccccHHHHHHHHhc----------CeEEEEEecccCCCCCch
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRN-PVIIYGYGGYGVSVLPTFSISRCMFLRHF----------NGIYAIPNIRGGGELGED 535 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~-P~vv~~hGg~~~~~~~~~~~~~~~~l~~~----------G~~v~~~~~rG~~~~g~~ 535 (734)
..|.++...+|.|+++.+++++ |++|++||+....... ...++... ++-|++|. |..-
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn-----~~~l~sg~gaiawa~pedqcfVlAPQ------y~~i 237 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDN-----DKVLSSGIGAIAWAGPEDQCFVLAPQ------YNPI 237 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchh-----hhhhhcCccceeeecccCceEEEccc------cccc
Confidence 4678999999999999999988 9999999985443321 11222222 33444444 2221
Q ss_pred hhhccccccCCCchhHHHHHHH-HHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccC
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA 614 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 614 (734)
|... ...-.+.....+..++ -|.++..+|.+||.++|.|+||+.+.+++.++||+|+|++..+|=-|-
T Consensus 238 f~d~--e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~--------- 306 (387)
T COG4099 238 FADS--EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR--------- 306 (387)
T ss_pred cccc--ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch---------
Confidence 2111 1111223344555555 666778899999999999999999999999999999999988873321
Q ss_pred cccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy4818 615 YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 694 (734)
Q Consensus 615 ~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 694 (734)
.. ..+++ .+.| +.+.|+.+|..+|.+.+.-++++|+.. ++++.+.
T Consensus 307 ------------v~------lv~~l---------k~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~-------~~kv~Yt 351 (387)
T COG4099 307 ------------VY------LVRTL---------KKAP-IWVFHSSDDKVIPVSNSRVLYERLKAL-------DRKVNYT 351 (387)
T ss_pred ------------hh------hhhhh---------ccCc-eEEEEecCCCccccCcceeehHHHHhh-------ccccchh
Confidence 00 01121 2344 999999999999999999999999998 7777666
Q ss_pred EeC
Q psy4818 695 VEQ 697 (734)
Q Consensus 695 ~~~ 697 (734)
.|.
T Consensus 352 af~ 354 (387)
T COG4099 352 AFL 354 (387)
T ss_pred hhh
Confidence 554
No 77
>PLN02872 triacylglycerol lipase
Probab=99.49 E-value=4.7e-13 Score=141.32 Aligned_cols=147 Identities=18% Similarity=0.189 Sum_probs=97.8
Q ss_pred CCCCceEEEEEEEcCCCcEEeEEEEEecccc-CCCCCcEEEEecCCCCCcCCcccc---HHHHHHHHhcCeEEEEEeccc
Q psy4818 453 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGAL-RNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRG 528 (734)
Q Consensus 453 ~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~-~~~~~P~vv~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG 528 (734)
...+|.+|+..+++.||..+.+.-+.+.... ...+.|+||++||...++..+... ...+..|+++||.|+++|.||
T Consensus 38 ~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG 117 (395)
T PLN02872 38 HPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRG 117 (395)
T ss_pred HHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccc
Confidence 3568899999999999988877665432211 123468899999987666554322 123445777899999999999
Q ss_pred CCC-CCchhhhcc-cc----ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEc
Q psy4818 529 GGE-LGEDWHNAG-RL----LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALIL 599 (734)
Q Consensus 529 ~~~-~g~~~~~~~-~~----~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~ 599 (734)
.+. +|....... .. .+......|+.++++++.+. ..+++.++|||+||.+++.++ .+|+ .++++++.
T Consensus 118 ~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l 193 (395)
T PLN02872 118 TRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALL 193 (395)
T ss_pred cccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHh
Confidence 652 342222211 11 11122346999999998764 236899999999999998666 4677 46677777
Q ss_pred CCcc
Q psy4818 600 VGAL 603 (734)
Q Consensus 600 ~~~~ 603 (734)
+|+.
T Consensus 194 ~P~~ 197 (395)
T PLN02872 194 CPIS 197 (395)
T ss_pred cchh
Confidence 7753
No 78
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.47 E-value=5.3e-13 Score=122.12 Aligned_cols=145 Identities=20% Similarity=0.251 Sum_probs=103.3
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
+||++||+.+... .|. .+...|+++||.|+.+|+||.+... ...+..++++++.+.. .++++
T Consensus 1 ~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWGGSRR--DYQ-PLAEALAEQGYAVVAFDYPGHGDSD--------------GADAVERVLADIRAGY-PDPDR 62 (145)
T ss_dssp EEEEECTTTTTTH--HHH-HHHHHHHHTTEEEEEESCTTSTTSH--------------HSHHHHHHHHHHHHHH-CTCCE
T ss_pred CEEEECCCCCCHH--HHH-HHHHHHHHCCCEEEEEecCCCCccc--------------hhHHHHHHHHHHHhhc-CCCCc
Confidence 5899999865432 343 3456677789999999999955431 0124445555543322 28899
Q ss_pred EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCc
Q psy4818 570 ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT 649 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~ 649 (734)
|+++|+|+||.++..++.+. ..++++|+..|+.+ .+.+ .. .
T Consensus 63 i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~----------------------~~~~---------~~-------~ 103 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD----------------------SEDL---------AK-------I 103 (145)
T ss_dssp EEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG----------------------CHHH---------TT-------T
T ss_pred EEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc----------------------hhhh---------hc-------c
Confidence 99999999999999999987 57899999988311 0111 11 3
Q ss_pred cCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCC
Q psy4818 650 QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 702 (734)
Q Consensus 650 ~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~ 702 (734)
+.| +|+++|++|..+++++..+++++++ .+.+++++++++|+
T Consensus 104 ~~p-v~~i~g~~D~~~~~~~~~~~~~~~~----------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIP-VLFIHGENDPLVPPEQVRRLYEALP----------GPKELYIIPGAGHF 145 (145)
T ss_dssp TSE-EEEEEETT-SSSHHHHHHHHHHHHC----------SSEEEEEETTS-TT
T ss_pred CCc-EEEEEECCCCcCCHHHHHHHHHHcC----------CCcEEEEeCCCcCc
Confidence 344 9999999999999999988888875 35789999999995
No 79
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.47 E-value=4.5e-13 Score=134.62 Aligned_cols=203 Identities=15% Similarity=0.091 Sum_probs=119.7
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||...... .|. .+...|. .||.|+++|+||.|.... ......++++.+.+..+++. .+
T Consensus 12 ~~~~li~~hg~~~~~~--~~~-~~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~i~~--~~ 77 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWD-PVLPALT-PDFRVLRYDKRGHGLSDA--------PEGPYSIEDLADDVLALLDH--LG 77 (251)
T ss_pred CCCeEEEEcCcccchh--hHH-HHHHHhh-cccEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHH--hC
Confidence 5689999999644332 233 3456666 599999999999654321 11234567777666666654 24
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc----------ccc-------Ccccc-cccCCCCCH-
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----------FTI-------AYYSE-SEFGSPNNK- 627 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----------~~~-------~~~~~-~~~g~~~~~- 627 (734)
.+++.++|+|+||++++.++.++|+.++++|+..+...+..... ... ...|. ..+..+...
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPAR 157 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHH
Confidence 46899999999999999999999999888887765432111000 000 00000 011111100
Q ss_pred -HHHH----------------HHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc
Q psy4818 628 -THFH----------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 690 (734)
Q Consensus 628 -~~~~----------------~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~ 690 (734)
+.+. .+........+.+ ++.| +|+++|++|..+|++...++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-vlii~g~~D~~~~~~~~~~~~~~~~~----------- 221 (251)
T TIGR02427 158 LDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGA----IAVP-TLCIAGDQDGSTPPELVREIADLVPG----------- 221 (251)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhh----cCCC-eEEEEeccCCcCChHHHHHHHHhCCC-----------
Confidence 0000 0111111122222 5677 99999999999999877766655432
Q ss_pred EEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 691 LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 691 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
.++++++++||...-... .+....+.+||
T Consensus 222 ~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl 250 (251)
T TIGR02427 222 ARFAEIRGAGHIPCVEQP--EAFNAALRDFL 250 (251)
T ss_pred ceEEEECCCCCcccccCh--HHHHHHHHHHh
Confidence 367889999998754332 23344455554
No 80
>COG0400 Predicted esterase [General function prediction only]
Probab=99.47 E-value=2.1e-12 Score=122.36 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=125.0
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh---ccccccC--CCchhHHHHHHHHH
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN---AGRLLKK--QNCFDDFQAAAEYM 559 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~---~~~~~~~--~~~~~D~~~~~~~l 559 (734)
+...|+||+.||-. .....|.+ +..++.- .+.++.++-+=.-+.+..|.. .+..+.+ ....+.+.+.++.+
T Consensus 15 ~p~~~~iilLHG~G--gde~~~~~-~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLG--GDELDLVP-LPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCC--CChhhhhh-hhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 45678999999953 33334444 3344443 555655433322222222222 2211110 12233444555555
Q ss_pred HHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCcc
Q psy4818 560 INKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPL 639 (734)
Q Consensus 560 ~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~ 639 (734)
.++.-+|++|+.+.|+|+|+.+++.++.++|++|+++|+..|+.-... . +.
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------~---------~~ 141 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------E---------LL 141 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------c---------cc
Confidence 666668999999999999999999999999999999999888652110 0 00
Q ss_pred CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHH
Q psy4818 640 HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYV 719 (734)
Q Consensus 640 ~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~ 719 (734)
.+. ...| +|++||..|++||..++.++.+.|++. |..++...++ .||.... ++.+.+.+
T Consensus 142 ~~~------~~~p-ill~hG~~Dpvvp~~~~~~l~~~l~~~-------g~~v~~~~~~-~GH~i~~------e~~~~~~~ 200 (207)
T COG0400 142 PDL------AGTP-ILLSHGTEDPVVPLALAEALAEYLTAS-------GADVEVRWHE-GGHEIPP------EELEAARS 200 (207)
T ss_pred ccc------CCCe-EEEeccCcCCccCHHHHHHHHHHHHHc-------CCCEEEEEec-CCCcCCH------HHHHHHHH
Confidence 111 2334 999999999999999999999999998 9999999999 8998853 44556677
Q ss_pred HHHHHc
Q psy4818 720 FLMKSL 725 (734)
Q Consensus 720 fl~~~l 725 (734)
|+.+.+
T Consensus 201 wl~~~~ 206 (207)
T COG0400 201 WLANTL 206 (207)
T ss_pred HHHhcc
Confidence 887754
No 81
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.46 E-value=2.7e-12 Score=131.59 Aligned_cols=203 Identities=15% Similarity=0.121 Sum_probs=121.6
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+||++||..+... .|.. +...|++ +|.|+.+|+||.|..... ......++++.+.+..++++. +.
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~-~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~~--~~ 94 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRD-LMPPLAR-SFRVVAPDLPGHGFTRAP-------FRFRFTLPSMAEDLSALCAAE--GL 94 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHH-HHHHHhh-CcEEEeecCCCCCCCCCc-------cccCCCHHHHHHHHHHHHHHc--CC
Confidence 588999999765443 2333 4466765 899999999996542211 111345677777766666542 33
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-c--------c----cccC-----------ccccccc--
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-N--------K----FTIA-----------YYSESEF-- 621 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-~--------~----~~~~-----------~~~~~~~-- 621 (734)
+++.|+|+|+||.+++.++.++|++++++|+.++..+.... . . .... ..+...+
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRD 174 (278)
T ss_pred CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhc
Confidence 57899999999999999999999988888877664331110 0 0 0000 0000000
Q ss_pred -CCCCCHH---HHH--------------HHHhCC--cc-CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 622 -GSPNNKT---HFH--------------NLLSYS--PL-HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 622 -g~~~~~~---~~~--------------~~~~~s--p~-~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
+...... .+. .+..++ ++ ..++. +++| +|+++|++|..||+.++..+.+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~lii~g~~D~~vp~~~~~~~~~~~~~- 248 (278)
T TIGR03056 175 TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPR----ITIP-LHLIAGEEDKAVPPDESKRAATRVPT- 248 (278)
T ss_pred cccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhccc----CCCC-EEEEEeCCCcccCHHHHHHHHHhccC-
Confidence 0000000 000 011111 00 11222 6677 99999999999999887776655433
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
+++.+++++||.+..... .+....+.+|+
T Consensus 249 ----------~~~~~~~~~gH~~~~e~p--~~~~~~i~~f~ 277 (278)
T TIGR03056 249 ----------ATLHVVPGGGHLVHEEQA--DGVVGLILQAA 277 (278)
T ss_pred ----------CeEEEECCCCCcccccCH--HHHHHHHHHHh
Confidence 367888999998765433 35555667775
No 82
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.45 E-value=2.8e-12 Score=133.15 Aligned_cols=122 Identities=21% Similarity=0.195 Sum_probs=80.0
Q ss_pred EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccc
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 542 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~ 542 (734)
++...||.+|..... + ....+.||++||+++..... .....+...+|.|+++|+||.|... .. .
T Consensus 8 ~~~~~~~~~l~y~~~---g---~~~~~~lvllHG~~~~~~~~----~~~~~~~~~~~~vi~~D~~G~G~S~---~~---~ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQS---G---NPDGKPVVFLHGGPGSGTDP----GCRRFFDPETYRIVLFDQRGCGKST---PH---A 71 (306)
T ss_pred eEEcCCCcEEEEEEC---c---CCCCCEEEEECCCCCCCCCH----HHHhccCccCCEEEEECCCCCCCCC---CC---C
Confidence 344557777665332 1 11235688999987664321 2223344459999999999954322 11 1
Q ss_pred ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 543 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 543 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.......+|+.+.+..+.+. ...+++.++|+|+||++++.++.++|+.++++|+..++
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREK--LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 11123466777777777665 23457999999999999999999999988888876543
No 83
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.45 E-value=3.3e-12 Score=130.75 Aligned_cols=221 Identities=17% Similarity=0.133 Sum_probs=130.4
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++...... + +...|.||++||..+... .|.. +...|.+ +|.|+++|+||.|... .. ....
T Consensus 10 ~~~~~~~~~~~--~---~~~~~plvllHG~~~~~~--~w~~-~~~~L~~-~~~vi~~Dl~G~G~S~---~~-----~~~~ 72 (276)
T TIGR02240 10 DGQSIRTAVRP--G---KEGLTPLLIFNGIGANLE--LVFP-FIEALDP-DLEVIAFDVPGVGGSS---TP-----RHPY 72 (276)
T ss_pred CCcEEEEEEec--C---CCCCCcEEEEeCCCcchH--HHHH-HHHHhcc-CceEEEECCCCCCCCC---CC-----CCcC
Confidence 66666554421 1 123367899999655443 3433 3455664 8999999999965432 11 1223
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc------c---c-cc--ccCc
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR------F---N-KF--TIAY 615 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~------~---~-~~--~~~~ 615 (734)
.++++.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+.++...... . . .. ....
T Consensus 73 ~~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 73 RFPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred cHHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 466666665555554 3456799999999999999999999999999998876543110 0 0 00 0000
Q ss_pred c----ccc-ccCCC--CCHHHH-----------------HHHH--hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH
Q psy4818 616 Y----SES-EFGSP--NNKTHF-----------------HNLL--SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 669 (734)
Q Consensus 616 ~----~~~-~~g~~--~~~~~~-----------------~~~~--~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~ 669 (734)
. ... .++.. .+++.. ..+. .......+.. +++| +|+++|++|+.+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHK----IQQP-TLVLAGDDDPIIPLIN 225 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhc----CCCC-EEEEEeCCCCcCCHHH
Confidence 0 000 00100 000000 0000 0111111233 7777 9999999999999998
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 670 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+.++.+.+... ++.++++ ||....... .+....+.+|+.+.-.
T Consensus 226 ~~~l~~~~~~~-----------~~~~i~~-gH~~~~e~p--~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 226 MRLLAWRIPNA-----------ELHIIDD-GHLFLITRA--EAVAPIIMKFLAEERQ 268 (276)
T ss_pred HHHHHHhCCCC-----------EEEEEcC-CCchhhccH--HHHHHHHHHHHHHhhh
Confidence 88787665433 5566665 998765433 4666778888887543
No 84
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.44 E-value=2.5e-12 Score=132.22 Aligned_cols=108 Identities=16% Similarity=0.061 Sum_probs=75.6
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||++++... +...+..++.+.||.|+++|.||.|... ... .......++++.+.+..+++. .+
T Consensus 24 ~~~~vl~~hG~~g~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~---~~~--~~~~~~~~~~~~~~~~~~~~~--~~ 94 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE--YLENLRELLKEEGREVIMYDQLGCGYSD---QPD--DSDELWTIDYFVDELEEVREK--LG 94 (288)
T ss_pred CCCeEEEEcCCCCccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCC---CCC--cccccccHHHHHHHHHHHHHH--cC
Confidence 35788999998776532 2233456666569999999999965421 100 001124566777766666654 33
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
.+++.++|+|+||.+++.++.++|+.++++|+..++.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 4569999999999999999999999999999877643
No 85
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.44 E-value=4.7e-13 Score=134.75 Aligned_cols=143 Identities=22% Similarity=0.183 Sum_probs=90.3
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc------------C---CccccHHHHHHHHhcC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS------------V---LPTFSISRCMFLRHFN 518 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~------------~---~~~~~~~~~~~l~~~G 518 (734)
.++|..|++.|.+.++..++++++.|++. .++.|.||++||-.+.. . .......+...|+++|
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 46789999999999999999999999985 68899999988732110 0 0011122456788899
Q ss_pred eEEEEEecccCCCCCchh-----------------hhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHH
Q psy4818 519 GIYAIPNIRGGGELGEDW-----------------HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLL 581 (734)
Q Consensus 519 ~~v~~~~~rG~~~~g~~~-----------------~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~ 581 (734)
|+|+++|.+|=|+.|..= ...|+...+...+ |.+.+++||..+..+|++||+++|+|+||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~-ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAW-DDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHH-HHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHH-HHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 999999999855544310 0011111122234 4556999999999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEEcC
Q psy4818 582 VGACLNQRPELYGAALILV 600 (734)
Q Consensus 582 ~~~~~~~~p~~~~a~v~~~ 600 (734)
++++++..+ +++|+|+.+
T Consensus 240 a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 240 AWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHHHHHH-T-T--EEEEES
T ss_pred HHHHHHcch-hhHhHhhhh
Confidence 999999976 456666544
No 86
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.43 E-value=2.8e-12 Score=129.76 Aligned_cols=206 Identities=14% Similarity=0.082 Sum_probs=117.9
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.+..|+||++||.++... .|.. +...|++ +|.|+.+|.||.|.... . ...++++...-+..+++.
T Consensus 13 ~~~~~~iv~lhG~~~~~~--~~~~-~~~~l~~-~~~vi~~D~~G~G~s~~---~------~~~~~~~~~~d~~~~l~~-- 77 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD--NLGV-LARDLVN-DHDIIQVDMRNHGLSPR---D------PVMNYPAMAQDLLDTLDA-- 77 (255)
T ss_pred CCCCCCEEEECCCCCchh--HHHH-HHHHHhh-CCeEEEECCCCCCCCCC---C------CCCCHHHHHHHHHHHHHH--
Confidence 456789999999876653 2333 3445654 89999999999664331 1 112444544433333333
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC--Ccchhcccc-----------ccccC------ccccc------
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV--GALDMLRFN-----------KFTIA------YYSES------ 619 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~~~~-----------~~~~~------~~~~~------ 619 (734)
...+++.++|||+||.+++.++.++|++++++|+.. |........ ..... ..+..
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEG 157 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHH
Confidence 244579999999999999999999999999988753 221100000 00000 00000
Q ss_pred -------ccCCCC----CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC
Q psy4818 620 -------EFGSPN----NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 688 (734)
Q Consensus 620 -------~~g~~~----~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~ 688 (734)
.+.... .+.....+.....+..+.. ++.| +|+++|++|..|+...+..+.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~---------- 222 (255)
T PRK10673 158 VIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPA----WPHP-ALFIRGGNSPYVTEAYRDDLLAQFP---------- 222 (255)
T ss_pred HHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCC----CCCC-eEEEECCCCCCCCHHHHHHHHHhCC----------
Confidence 000000 0000001111111112222 5667 9999999999998766665555443
Q ss_pred CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 689 NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.+++.+++++||....... .+....+..||.+
T Consensus 223 -~~~~~~~~~~gH~~~~~~p--~~~~~~l~~fl~~ 254 (255)
T PRK10673 223 -QARAHVIAGAGHWVHAEKP--DAVLRAIRRYLND 254 (255)
T ss_pred -CcEEEEeCCCCCeeeccCH--HHHHHHHHHHHhc
Confidence 3477889999998754333 3455667778764
No 87
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.43 E-value=9.4e-12 Score=121.97 Aligned_cols=237 Identities=18% Similarity=0.164 Sum_probs=145.9
Q ss_pred EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccc
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 542 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~ 542 (734)
.+...||..+......++. +...|+||..||--|++.++ |...+...+.++||.|+++|.||-++.-. .. ..
T Consensus 53 ~v~~pdg~~~~ldw~~~p~---~~~~P~vVl~HGL~G~s~s~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n---~~-p~ 124 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPR---AAKKPLVVLFHGLEGSSNSP-YARGLMRALSRRGWLVVVFHFRGCSGEAN---TS-PR 124 (345)
T ss_pred EEEcCCCCEEEEeeccCcc---ccCCceEEEEeccCCCCcCH-HHHHHHHHHHhcCCeEEEEecccccCCcc---cC-cc
Confidence 3445566655555554322 35679999999987777776 66666677778899999999999443211 01 11
Q ss_pred ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHH-HHHHHHHhcC--CCceeEEEEcCCcchhcc-ccccccC----
Q psy4818 543 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG-LLVGACLNQR--PELYGAALILVGALDMLR-FNKFTIA---- 614 (734)
Q Consensus 543 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG-~~~~~~~~~~--p~~~~a~v~~~~~~d~~~-~~~~~~~---- 614 (734)
.......+|+..+++++.++.. +.++.++|.|.|| .|+.+++.+. +-+-+|++..+|+ |+.. ......+
T Consensus 125 ~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 125 LYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEACAYRLDSGFSLR 201 (345)
T ss_pred eecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHHHHHhcCchhhh
Confidence 1222345899999999988643 5689999999999 5555554432 2244566666664 2110 0000000
Q ss_pred --------------------------cc---------ccccc----CCC--CCHHHHHHHHhCCccCCCCCCCCCccCCc
Q psy4818 615 --------------------------YY---------SESEF----GSP--NNKTHFHNLLSYSPLHNIKVPPNNTQYPA 653 (734)
Q Consensus 615 --------------------------~~---------~~~~~----g~~--~~~~~~~~~~~~sp~~~~~~p~~~~~~P~ 653 (734)
.. -..+| ..| .-++..++++..|.+..+.. |..|
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~----Ir~P- 276 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPK----IRKP- 276 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccc----cccc-
Confidence 00 00011 111 11234567888898888876 8888
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHh-hhCCCCCCCCcEEEEEeCCCCCCC-C--CchHHhHHHHHHHHHHHHHHcC
Q psy4818 654 TLVLTGDHDDRVPPLHSYKFIATLQE-KIGSLPYQKNPLLLRVEQDAGHGQ-G--TPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 654 ~Li~~g~~D~~v~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~gH~~-~--~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+||+|+.+|+.+++...- .++. . +..++|....-+||.. . +..+...-..+++.+||...+.
T Consensus 277 tLii~A~DDP~~~~~~iP----~~~~~~-------np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 277 TLIINAKDDPFMPPEVIP----KLQEML-------NPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred eEEEecCCCCCCChhhCC----cchhcC-------CCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999999999999874322 2222 2 5678899999999943 2 2222212344568899988764
No 88
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=8.6e-12 Score=129.08 Aligned_cols=207 Identities=12% Similarity=0.040 Sum_probs=121.8
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||.+++... |.. ....|++++ .|+++|.||.|..... .....+++....+..+++. ..
T Consensus 26 ~g~~vvllHG~~~~~~~--w~~-~~~~L~~~~-~via~D~~G~G~S~~~--------~~~~~~~~~a~dl~~ll~~--l~ 91 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYL--WRN-IIPHLAGLG-RCLAPDLIGMGASDKP--------DIDYTFADHARYLDAWFDA--LG 91 (295)
T ss_pred CCCEEEEECCCCCCHHH--HHH-HHHHHhhCC-EEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHH--hC
Confidence 34789999998765543 333 345666644 9999999996543211 1123455555555555544 23
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchh---ccc----------ccc-ccCcc-------ccc----cc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM---LRF----------NKF-TIAYY-------SES----EF 621 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~---~~~----------~~~-~~~~~-------~~~----~~ 621 (734)
.+++.++|+|+||.+++.++.++|++++++|+.+++... ... ... ..+.. ... .+
T Consensus 92 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
T PRK03592 92 LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGS 171 (295)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCc
Confidence 367999999999999999999999999999987763211 000 000 00000 000 00
Q ss_pred -CCCCCHHHHHHH-----------------HhCCcc--------------CCCCCCCCCccCCcEEEEecCCCCCCCChH
Q psy4818 622 -GSPNNKTHFHNL-----------------LSYSPL--------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLH 669 (734)
Q Consensus 622 -g~~~~~~~~~~~-----------------~~~sp~--------------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~ 669 (734)
.....++....+ ....+. ..+. .++.| +|+++|.+|..+++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P-~lii~G~~D~~~~~~~ 246 (295)
T PRK03592 172 ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLA----TSDVP-KLLINAEPGAILTTGA 246 (295)
T ss_pred ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhc----cCCCC-eEEEeccCCcccCcHH
Confidence 000011111111 110000 0011 26777 9999999999997666
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 670 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
..++...+.. ..++.+++++||....... .+..+.+.+|+.+.
T Consensus 247 ~~~~~~~~~~----------~~~~~~i~~~gH~~~~e~p--~~v~~~i~~fl~~~ 289 (295)
T PRK03592 247 IRDWCRSWPN----------QLEITVFGAGLHFAQEDSP--EEIGAAIAAWLRRL 289 (295)
T ss_pred HHHHHHHhhh----------hcceeeccCcchhhhhcCH--HHHHHHHHHHHHHh
Confidence 6666544332 2367888999998875433 46667788898865
No 89
>PLN02965 Probable pheophorbidase
Probab=99.43 E-value=8e-12 Score=126.25 Aligned_cols=204 Identities=11% Similarity=0.121 Sum_probs=119.7
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC-C
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP-K 568 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~ 568 (734)
.||++||...... .|.. ....|++.||.|+++|+||.|... .. .....+++++.+.+..+++. .+. +
T Consensus 5 ~vvllHG~~~~~~--~w~~-~~~~L~~~~~~via~Dl~G~G~S~---~~----~~~~~~~~~~a~dl~~~l~~--l~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGAW--CWYK-LATLLDAAGFKSTCVDLTGAGISL---TD----SNTVSSSDQYNRPLFALLSD--LPPDH 72 (255)
T ss_pred EEEEECCCCCCcC--cHHH-HHHHHhhCCceEEEecCCcCCCCC---CC----ccccCCHHHHHHHHHHHHHh--cCCCC
Confidence 4899999865543 3443 345565569999999999966432 11 11134466666655555554 223 4
Q ss_pred cEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc---hhc---ccc--ccccCccccc---------------------
Q psy4818 569 YITIMGGSNGGLLVGACLNQRPELYGAALILVGAL---DML---RFN--KFTIAYYSES--------------------- 619 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d~~---~~~--~~~~~~~~~~--------------------- 619 (734)
++.++|||+||.++..++.++|++++++|..++.. ... ... .......|..
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 89999999999999999999999999888766541 100 000 0000000100
Q ss_pred c--cCCCCCHHHHHHHHh---CCccC---C---CC--CCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCC
Q psy4818 620 E--FGSPNNKTHFHNLLS---YSPLH---N---IK--VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 686 (734)
Q Consensus 620 ~--~g~~~~~~~~~~~~~---~sp~~---~---~~--~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~ 686 (734)
. +.. ...+....... ..+.. . .. .+ .++.| +|+++|++|..+|+..+..+.+.+...
T Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~a------ 222 (255)
T PLN02965 153 HYYYNQ-SPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPE--AEKVP-RVYIKTAKDNLFDPVRQDVMVENWPPA------ 222 (255)
T ss_pred HHHhcC-CCHHHHHHHHHhcCCCCCcchhhhhhccchhh--cCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCcc------
Confidence 0 000 00000000000 00110 0 00 00 26777 999999999999998887777665543
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 687 QKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 687 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++.+++++||...-... .+....+.+|+.
T Consensus 223 -----~~~~i~~~GH~~~~e~p--~~v~~~l~~~~~ 251 (255)
T PLN02965 223 -----QTYVLEDSDHSAFFSVP--TTLFQYLLQAVS 251 (255)
T ss_pred -----eEEEecCCCCchhhcCH--HHHHHHHHHHHH
Confidence 67888999998865444 345555666654
No 90
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.42 E-value=2.3e-12 Score=133.35 Aligned_cols=211 Identities=14% Similarity=0.081 Sum_probs=124.1
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..++.. .|... ...|.+ .|.|+++|.||.|..... ............++|+...+..++++-. .
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~-~~~L~~-~~~vi~~DlpG~G~S~~~-~~~~~~~~~~~~~~~~a~~l~~~l~~l~--~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKN-TPVLAK-SHRVYAIDLLGYGYSDKP-NPRSAPPNSFYTFETWGEQLNDFCSDVV--G 101 (294)
T ss_pred CCeEEEECCCCCChh--HHHHH-HHHHHh-CCeEEEEcCCCCCCCCCC-ccccccccccCCHHHHHHHHHHHHHHhc--C
Confidence 378999999866654 34443 355665 579999999996643211 0000000123567777776666555422 3
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-----------------ccc-cCcccc-----------
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-----------------KFT-IAYYSE----------- 618 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-----------------~~~-~~~~~~----------- 618 (734)
+++.++|||+||++++.++.++|++++++|+.+|........ ... .+..+.
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKN 181 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHH
Confidence 679999999999999999999999999999887643111000 000 000000
Q ss_pred ---cccCCC--CCHHHHHH----------------HHhCCcc----CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHH
Q psy4818 619 ---SEFGSP--NNKTHFHN----------------LLSYSPL----HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKF 673 (734)
Q Consensus 619 ---~~~g~~--~~~~~~~~----------------~~~~sp~----~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~ 673 (734)
..|+.. ...+..+. +..++.. ..+. .+++| +|+++|++|..++...+.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P-~lvi~G~~D~~~~~~~~~~~ 256 (294)
T PLN02824 182 ILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLP----AVKCP-VLIAWGEKDPWEPVELGRAY 256 (294)
T ss_pred HHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHh----hcCCC-eEEEEecCCCCCChHHHHHH
Confidence 001111 01111111 1111111 1122 26777 99999999999998877654
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 674 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 674 ~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.+.+ ...++.+++++||....... .+....+.+||.+
T Consensus 257 ~~~~-----------~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 293 (294)
T PLN02824 257 ANFD-----------AVEDFIVLPGVGHCPQDEAP--ELVNPLIESFVAR 293 (294)
T ss_pred HhcC-----------CccceEEeCCCCCChhhhCH--HHHHHHHHHHHhc
Confidence 3322 12467888999998765443 4566667888865
No 91
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.40 E-value=4.3e-11 Score=119.12 Aligned_cols=214 Identities=10% Similarity=-0.039 Sum_probs=131.9
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC--ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL--PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~--~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
.+.+++..|. +.++++.|.+ .++.|+||++||..+.... ..|. .....|+++||.|+.+|+||.|........
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~---~~~~~~VlllHG~g~~~~~~~~~~~-~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~ 76 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVA---VGPRGVVIYLPPFAEEMNKSRRMVA-LQARAFAAGGFGVLQIDLYGCGDSAGDFAA 76 (266)
T ss_pred CEEecCCCCc-EEEEEecCCC---CCCceEEEEECCCcccccchhHHHH-HHHHHHHHCCCEEEEECCCCCCCCCCcccc
Confidence 3556666665 5577776654 2457899999995432221 1122 234567778999999999996543211111
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc----c---
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----F--- 611 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----~--- 611 (734)
. ......+|+.+++++|.+.+ ..+++++|+|+||.+++.++.++|+.++++|+.+|+++...+.. +
T Consensus 77 ~----~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~ 149 (266)
T TIGR03101 77 A----RWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLV 149 (266)
T ss_pred C----CHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHH
Confidence 0 01123578888999987753 46899999999999999999999999999999999876443321 0
Q ss_pred ---ccCcc---------------cccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEec-CCCCCCCChHHHH
Q psy4818 612 ---TIAYY---------------SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTG-DHDDRVPPLHSYK 672 (734)
Q Consensus 612 ---~~~~~---------------~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g-~~D~~v~~~~~~~ 672 (734)
..+.. ...-.|..-.++....|.+.....-+. ..+++|++.- ..+..-......+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (266)
T TIGR03101 150 ARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVP------KNCPVHWFEVRPEEGATLSPVFSR 223 (266)
T ss_pred HHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCC------CCCceEEEEeccccCCCCCHHHHH
Confidence 00000 000012222333334444333221111 1123666654 3333445567789
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCC
Q psy4818 673 FIATLQEKIGSLPYQKNPLLLRVEQDA 699 (734)
Q Consensus 673 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ 699 (734)
+.+++++. |..++...+++.
T Consensus 224 l~~~~~~~-------g~~v~~~~~~~~ 243 (266)
T TIGR03101 224 LGEQWVQS-------GVEVTVDLVPGP 243 (266)
T ss_pred HHHHHHHc-------CCeEeeeecCCc
Confidence 99999999 999999999988
No 92
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=6.6e-12 Score=128.88 Aligned_cols=103 Identities=16% Similarity=0.067 Sum_probs=74.3
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||.+.... .|.. +...|.+ +|.|+++|+||.|..+.. ......++++.+.+..++++ .+
T Consensus 33 ~~~~iv~lHG~~~~~~--~~~~-~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~--~~ 99 (286)
T PRK03204 33 TGPPILLCHGNPTWSF--LYRD-IIVALRD-RFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDH--LG 99 (286)
T ss_pred CCCEEEEECCCCccHH--HHHH-HHHHHhC-CcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hC
Confidence 3478999999764332 2332 3456664 899999999996543210 11124567888888887765 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.+++.++|||+||.++..++..+|++++++|+.++.
T Consensus 100 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 100 LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 467999999999999999999999999999876553
No 93
>KOG0293|consensus
Probab=99.39 E-value=4.2e-11 Score=118.15 Aligned_cols=241 Identities=16% Similarity=0.135 Sum_probs=155.2
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc--cccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~--~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
+...+..+.||||.++|.-... + ..+++||+.+|..+..-..+ ....+.+|-|||.+++..+.+
T Consensus 268 h~~~V~yi~wSPDdryLlaCg~----~-e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d--------- 333 (519)
T KOG0293|consen 268 HSQPVSYIMWSPDDRYLLACGF----D-EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD--------- 333 (519)
T ss_pred ccCceEEEEECCCCCeEEecCc----h-HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC---------
Confidence 4466889999999999874422 1 24999999999865433222 334789999999997665532
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
..++.+++++... --++....+ -+..++.++||++++.... ...|.+++.++... +
T Consensus 334 -------r~i~~wdlDgn~~---~~W~gvr~~-~v~dlait~Dgk~vl~v~~----d~~i~l~~~e~~~d---------r 389 (519)
T KOG0293|consen 334 -------RTIIMWDLDGNIL---GNWEGVRDP-KVHDLAITYDGKYVLLVTV----DKKIRLYNREARVD---------R 389 (519)
T ss_pred -------CcEEEecCCcchh---hcccccccc-eeEEEEEcCCCcEEEEEec----ccceeeechhhhhh---------h
Confidence 2678888876421 112222222 4567899999999987652 26888898887211 2
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.++......... +|.||+.++ .|-. ...+..||++... .++....+. ...++.+.+-..++.++++.+++
T Consensus 390 ~lise~~~its~~iS~d~k~~L--vnL~--~qei~LWDl~e~~--lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED-- 461 (519)
T KOG0293|consen 390 GLISEEQPITSFSISKDGKLAL--VNLQ--DQEIHLWDLEENK--LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSED-- 461 (519)
T ss_pred ccccccCceeEEEEcCCCcEEE--EEcc--cCeeEEeecchhh--HHHHhhcccccceEEEeccCCCCcceEEecCCC--
Confidence 233333333343 777776544 3332 3569999997432 112222222 12344444333335788887777
Q ss_pred eeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+++|+|+..+|+.+..|++....+..++++|....++.+.+.. +++.++-+
T Consensus 462 ~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDD---gtIRIWg~ 512 (519)
T KOG0293|consen 462 SKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDD---GTIRIWGP 512 (519)
T ss_pred ceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCC---CeEEEecC
Confidence 6899999999999999998888888899999888777655543 35555544
No 94
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.38 E-value=5e-12 Score=126.52 Aligned_cols=196 Identities=15% Similarity=0.042 Sum_probs=112.5
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..+... .|.. ....|.+ +|.|+++|+||.|.... ....+++++. +.+.+. . .
T Consensus 4 ~~~iv~~HG~~~~~~--~~~~-~~~~l~~-~~~vi~~d~~G~G~s~~---------~~~~~~~~~~---~~~~~~--~-~ 64 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE--VFRC-LDEELSA-HFTLHLVDLPGHGRSRG---------FGPLSLADAA---EAIAAQ--A-P 64 (245)
T ss_pred CceEEEEcCCCCchh--hHHH-HHHhhcc-CeEEEEecCCcCccCCC---------CCCcCHHHHH---HHHHHh--C-C
Confidence 478899999644433 3433 3456664 89999999999554210 1112344444 444432 1 2
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc--cccc------------cCc-------ccc--cccCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--NKFT------------IAY-------YSE--SEFGSP 624 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--~~~~------------~~~-------~~~--~~~g~~ 624 (734)
+++.++|+|+||++++.++.++|++++++|+..+...+... .... ... .+. ..++.+
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTP 144 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999988998876554321100 0000 000 000 001111
Q ss_pred CCHHHH----------------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 625 NNKTHF----------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 625 ~~~~~~----------------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
...+.. ..+...+....+.. +++| +|+++|++|..|++.....+.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vlii~g~~D~~~~~~~~~~~~~~~~---- 215 (245)
T TIGR01738 145 TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQN----ISVP-FLRLYGYLDGLVPAKVVPYLDKLAP---- 215 (245)
T ss_pred ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhc----CCCC-EEEEeecCCcccCHHHHHHHHHhCC----
Confidence 110000 00100111112222 6777 9999999999999887766665443
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHH
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVF 720 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 720 (734)
.+++++++++||...-... .+....+.+|
T Consensus 216 -------~~~~~~~~~~gH~~~~e~p--~~~~~~i~~f 244 (245)
T TIGR01738 216 -------HSELYIFAKAAHAPFLSHA--EAFCALLVAF 244 (245)
T ss_pred -------CCeEEEeCCCCCCccccCH--HHHHHHHHhh
Confidence 2478889999998765433 3444445555
No 95
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.37 E-value=1.3e-11 Score=132.75 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=81.1
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHH---hcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR---HFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
..+.+++.....|++ ....|.||++||..+... .|.......+. ++||.|+++|+||.|.... . .
T Consensus 183 ~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~---p----~ 250 (481)
T PLN03087 183 SSNESLFVHVQQPKD---NKAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPK---P----A 250 (481)
T ss_pred eCCeEEEEEEecCCC---CCCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcC---C----C
Confidence 345667776666654 133578999999865543 23322222232 3599999999999554321 1 1
Q ss_pred cCCCchhHHHHHH-HHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 544 KKQNCFDDFQAAA-EYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 544 ~~~~~~~D~~~~~-~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.....+++..+.+ ..+++. ...+++.++|||+||++++.++.++|++++++|+.+|.
T Consensus 251 ~~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 251 DSLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred CCcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 1224566666665 345544 23467999999999999999999999999999987753
No 96
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.37 E-value=3.2e-12 Score=123.90 Aligned_cols=163 Identities=20% Similarity=0.256 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc---ccc---ccCcccc----
Q psy4818 549 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF---NKF---TIAYYSE---- 618 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~---~~~---~~~~~~~---- 618 (734)
++=|..|++||.++..+++++|+|+|.|.||.+++.++.+.| .++++|+.+|-.-.... ... ..+..+.
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 466889999999999999999999999999999999999999 67999998884322211 010 0000000
Q ss_pred ccc---CCCCCHHHHHH------HHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHHHHHHhhhCCCCCCC
Q psy4818 619 SEF---GSPNNKTHFHN------LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGSLPYQK 688 (734)
Q Consensus 619 ~~~---g~~~~~~~~~~------~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~~~~~~~~~~ 688 (734)
..+ +.......+.. -.+.-|+++ ++.| +|+++|+.|...|-.+ +..+.++|+++ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~-------i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~-------~ 146 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEK-------IKGP-ILLISGEDDQIWPSSEMAEQIEERLKAA-------G 146 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG---------SE-EEEEEETT-SSS-HHHHHHHHHHHHHCT-------T
T ss_pred ceecCCcceehhhhhhcccccccccccccHHH-------cCCC-EEEEEeCCCCccchHHHHHHHHHHHHHh-------C
Confidence 000 00000000000 011223333 5556 9999999998887665 44556678777 5
Q ss_pred Cc--EEEEEeCCCCCCCCCch--------------------------HHhHHHHHHHHHHHHHHcCC
Q psy4818 689 NP--LLLRVEQDAGHGQGTPL--------------------------MKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 689 ~~--~~~~~~~~~gH~~~~~~--------------------------~~~~~~~~~~~~fl~~~l~~ 727 (734)
.+ ++++.|+++||.+..+. ..+.+.+.++++||.++|+.
T Consensus 147 ~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 147 FPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp -----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44 88899999999764220 12367888999999999973
No 97
>KOG4178|consensus
Probab=99.37 E-value=6e-11 Score=116.84 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=75.5
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.+..|+|+++||-|.....+.+.. ..|+.+||.|+++|.|| ||.. .........+++-+...+..|++.
T Consensus 41 ~~~gP~illlHGfPe~wyswr~q~---~~la~~~~rviA~DlrG---yG~S---d~P~~~~~Yt~~~l~~di~~lld~-- 109 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWYSWRHQI---PGLASRGYRVIAPDLRG---YGFS---DAPPHISEYTIDELVGDIVALLDH-- 109 (322)
T ss_pred CCCCCEEEEEccCCccchhhhhhh---hhhhhcceEEEecCCCC---CCCC---CCCCCcceeeHHHHHHHHHHHHHH--
Confidence 356899999999998888776653 45677899999999999 5532 111222233444444444444433
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
+--+|+.++||++|+.++..++..+|++.++.|+..
T Consensus 110 Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 110 LGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred hccceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 114689999999999999999999999999888654
No 98
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.36 E-value=3.6e-11 Score=128.89 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=68.3
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchh-HHHHHHHHHHHcCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD-DFQAAAEYMINKKY 564 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~-D~~~~~~~l~~~~~ 564 (734)
+..|+||++||..+... .|... ...|.+ +|.|+++|+||.|..... . .........+ .+++.+..+++.
T Consensus 103 ~~~p~vvllHG~~~~~~--~~~~~-~~~L~~-~~~vi~~D~rG~G~S~~~---~-~~~~~~~~~~~~~~~~i~~~~~~-- 172 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG--FFFRN-FDALAS-RFRVIAIDQLGWGGSSRP---D-FTCKSTEETEAWFIDSFEEWRKA-- 172 (402)
T ss_pred CCCCEEEEECCCCcchh--HHHHH-HHHHHh-CCEEEEECCCCCCCCCCC---C-cccccHHHHHHHHHHHHHHHHHH--
Confidence 45689999999754332 23333 355665 799999999996654311 0 0000001111 233333333332
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.+.+++.++|||+||++++.++.++|+.++++|+..|.
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 24568999999999999999999999999998887664
No 99
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.35 E-value=2.3e-11 Score=128.95 Aligned_cols=209 Identities=18% Similarity=0.149 Sum_probs=120.5
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..+... .|... ...|.+ +|.|+++|+||.|... ... .....++++...+..+++. ...
T Consensus 88 gp~lvllHG~~~~~~--~w~~~-~~~L~~-~~~via~Dl~G~G~S~---~~~----~~~~~~~~~a~~l~~~l~~--l~~ 154 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRN-IGVLAK-NYTVYAIDLLGFGASD---KPP----GFSYTMETWAELILDFLEE--VVQ 154 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHH-HHHHhc-CCEEEEECCCCCCCCC---CCC----CccccHHHHHHHHHHHHHH--hcC
Confidence 378999999765543 34433 355665 8999999999955322 110 0123455655554444443 234
Q ss_pred CcEEEEEcChHHHHHHHHHh-cCCCceeEEEEcCCcchhccc-----ccc--c---------------cCccc-------
Q psy4818 568 KYITIMGGSNGGLLVGACLN-QRPELYGAALILVGALDMLRF-----NKF--T---------------IAYYS------- 617 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~-----~~~--~---------------~~~~~------- 617 (734)
+++.++|+|+||++++.++. .+|++++++|+..+....... ... . ....+
T Consensus 155 ~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (360)
T PLN02679 155 KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQR 234 (360)
T ss_pred CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCH
Confidence 68999999999999988876 469999999877653211000 000 0 00000
Q ss_pred --c-----cccCCCC--CHHHHHH-------------HHhC-------CccCCCCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 618 --E-----SEFGSPN--NKTHFHN-------------LLSY-------SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 618 --~-----~~~g~~~--~~~~~~~-------------~~~~-------sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
. ..++.+. ..+..+. +... .....+.. ++.| +||++|++|..+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-tLii~G~~D~~~p~~ 309 (360)
T PLN02679 235 DNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPR----ISLP-ILVLWGDQDPFTPLD 309 (360)
T ss_pred HHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhh----cCCC-EEEEEeCCCCCcCch
Confidence 0 0011110 1111111 1100 00011222 6777 999999999999987
Q ss_pred HH-HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 669 HS-YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 669 ~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.. .++.+.|.+. -...++++++++||....... .+..+.+.+||.+
T Consensus 310 ~~~~~~~~~l~~~-------ip~~~l~~i~~aGH~~~~E~P--e~~~~~I~~FL~~ 356 (360)
T PLN02679 310 GPVGKYFSSLPSQ-------LPNVTLYVLEGVGHCPHDDRP--DLVHEKLLPWLAQ 356 (360)
T ss_pred hhHHHHHHhhhcc-------CCceEEEEcCCCCCCccccCH--HHHHHHHHHHHHh
Confidence 43 3455555544 234688999999998765443 4666778889874
No 100
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.35 E-value=1.5e-11 Score=123.27 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=72.0
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHH-HHHHHHcCCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKYTKP 567 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~ 567 (734)
|+||++||..+.... |.. ....|+ +||.|+++|.||.|..... .......++++... +..+.+. .+.
T Consensus 2 ~~vv~~hG~~~~~~~--~~~-~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD--WQA-LIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGI 69 (251)
T ss_pred CEEEEEcCCCCchhh--HHH-HHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCC
Confidence 789999997655443 333 345566 5999999999995543211 11122345555544 5555443 355
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
+++.++|||+||.+++.++.++|+.++++|+.++..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 689999999999999999999999999999877654
No 101
>KOG0271|consensus
Probab=99.34 E-value=7.9e-10 Score=108.35 Aligned_cols=254 Identities=15% Similarity=0.093 Sum_probs=146.1
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
++...+-..+|||||++|| .|+...++++||+.|..++-...+.. .+..++|||||+.|+-...+.
T Consensus 113 GH~e~Vl~~~fsp~g~~l~-----tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg-------- 179 (480)
T KOG0271|consen 113 GHGEAVLSVQFSPTGSRLV-----TGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDG-------- 179 (480)
T ss_pred CCCCcEEEEEecCCCceEE-----ecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCC--------
Confidence 3344567899999999999 56667899999999887654333222 236899999999999877543
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEe-----cCCcEEEEEEecCCCCceEEEEeCCCCCCC-ccc
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT-----DCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KIS 291 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S-----pDG~~l~~~~~~~~~~~~i~~~d~~~~~~~-~l~ 291 (734)
.|.+|+..+++..-. ..+.+..++.+++|- |..++++- ....+.+.+||+..+... .+.
T Consensus 180 --------~I~lwdpktg~~~g~---~l~gH~K~It~Lawep~hl~p~~r~las----~skDg~vrIWd~~~~~~~~~ls 244 (480)
T KOG0271|consen 180 --------SIRLWDPKTGQQIGR---ALRGHKKWITALAWEPLHLVPPCRRLAS----SSKDGSVRIWDTKLGTCVRTLS 244 (480)
T ss_pred --------eEEEecCCCCCcccc---cccCcccceeEEeecccccCCCccceec----ccCCCCEEEEEccCceEEEEec
Confidence 688888776653222 223455677788875 57776662 223367888888763211 111
Q ss_pred CCC-Cceeeecc-ccce--------EEEEEec-CC-------------eEEEEeC-------------------------
Q psy4818 292 GKF-PLKTVIPG-MDHH--------HEIIANN-GP-------------ELIVKTT------------------------- 322 (734)
Q Consensus 292 ~~~-~~~~l~~~-~~~~--------~~~~s~d-g~-------------~l~~~s~------------------------- 322 (734)
... ++..+--+ .+.. ...|... |. .|...++
T Consensus 245 gHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~A 324 (480)
T KOG0271|consen 245 GHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKA 324 (480)
T ss_pred cCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHH
Confidence 111 11111111 0000 0011111 00 0000000
Q ss_pred ----------------CCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCC
Q psy4818 323 ----------------KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG 386 (734)
Q Consensus 323 ----------------~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g 386 (734)
....++.|++|+..... ..+...+.+. ..+..+.+..+++++++++-+ ..+.+|+-.+|
T Consensus 325 l~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgHq--~lVn~V~fSPd~r~IASaSFD--kSVkLW~g~tG 399 (480)
T KOG0271|consen 325 LERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGHQ--ALVNHVSFSPDGRYIASASFD--KSVKLWDGRTG 399 (480)
T ss_pred HHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhchh--hheeeEEECCCccEEEEeecc--cceeeeeCCCc
Confidence 00112345555432211 0112222222 334445555556777777655 57899999999
Q ss_pred ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 387 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 387 ~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+..+....+.|+.+.++.|. +++++.|... ++-.+|+
T Consensus 400 k~lasfRGHv~~VYqvawsaDs-RLlVS~SkDs---TLKvw~V 438 (480)
T KOG0271|consen 400 KFLASFRGHVAAVYQVAWSADS-RLLVSGSKDS---TLKVWDV 438 (480)
T ss_pred chhhhhhhccceeEEEEeccCc-cEEEEcCCCc---eEEEEEe
Confidence 9877787777788888888775 6888887765 5777887
No 102
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.34 E-value=2.1e-11 Score=123.84 Aligned_cols=198 Identities=17% Similarity=0.142 Sum_probs=127.1
Q ss_pred HHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHH-cCCCCCCcEEEEEcChHHHHHHHHHhc-
Q psy4818 511 CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN-KKYTKPKYITIMGGSNGGLLVGACLNQ- 588 (734)
Q Consensus 511 ~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG~~~~~~~~~- 588 (734)
..+|. +||+|+++||-| .|..|... .......-|.+.|++.+.. .+.....+++++|+|-||..+++++..
T Consensus 20 ~~~L~-~GyaVv~pDY~G---lg~~y~~~---~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 20 AAWLA-RGYAVVAPDYEG---LGTPYLNG---RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHH-CCCEEEecCCCC---CCCcccCc---HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 45554 699999999998 34333221 1122345566666666654 244445799999999999999998754
Q ss_pred ---CCCc---eeEEEEcCCcchhccccccccCccc---------------------ccccCCCC----------------
Q psy4818 589 ---RPEL---YGAALILVGALDMLRFNKFTIAYYS---------------------ESEFGSPN---------------- 625 (734)
Q Consensus 589 ---~p~~---~~a~v~~~~~~d~~~~~~~~~~~~~---------------------~~~~g~~~---------------- 625 (734)
.||+ +.++++..|..|+..+.....+..+ ..++..+.
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 4776 6899999998887655422111100 00000000
Q ss_pred -------------------------CHHHHHHHHhCCc-cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHh
Q psy4818 626 -------------------------NKTHFHNLLSYSP-LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 679 (734)
Q Consensus 626 -------------------------~~~~~~~~~~~sp-~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~ 679 (734)
++.....+.+.+. +..-.. -+.| ++|.||..|..||+....++++++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWT----PTVP-VLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCC----CCCC-EEEEecCCCCCCChHHHHHHHHHHHH
Confidence 0001111222111 000011 2455 99999999999999999999999999
Q ss_pred hhCCCCCCC-CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCCCC
Q psy4818 680 KIGSLPYQK-NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYYPD 732 (734)
Q Consensus 680 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 732 (734)
. | .+++++.++..+|.... .......++||...|....+++
T Consensus 248 ~-------G~a~V~~~~~~~~~H~~~~-----~~~~~~a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 248 A-------GGADVEYVRYPGGGHLGAA-----FASAPDALAWLDDRFAGKPATS 289 (290)
T ss_pred c-------CCCCEEEEecCCCChhhhh-----hcCcHHHHHHHHHHHCCCCCCC
Confidence 9 8 89999999999997542 2233457899999998877654
No 103
>PRK06489 hypothetical protein; Provisional
Probab=99.34 E-value=2.6e-11 Score=128.90 Aligned_cols=110 Identities=17% Similarity=0.153 Sum_probs=69.3
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHH-------HhcCeEEEEEecccCCCCCchhhhccc-cccCCCchhHHHHHH-HH
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFL-------RHFNGIYAIPNIRGGGELGEDWHNAGR-LLKKQNCFDDFQAAA-EY 558 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l-------~~~G~~v~~~~~rG~~~~g~~~~~~~~-~~~~~~~~~D~~~~~-~~ 558 (734)
.|.||++||+.++...+. ...+...| ..++|.|+++|+||.|..... .... .......++++...+ ..
T Consensus 69 gpplvllHG~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p--~~~~~~~~~~~~~~~~a~~~~~~ 145 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL-SPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKP--SDGLRAAFPRYDYDDMVEAQYRL 145 (360)
T ss_pred CCeEEEeCCCCCchhhhc-cchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCC--CcCCCCCCCcccHHHHHHHHHHH
Confidence 578999999876543321 11222222 135899999999996643210 0000 001124567776543 33
Q ss_pred HHHcCCCCCCcEE-EEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 559 MINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 559 l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
+.++ .+-+++. |+|+|+||++++.++.++|++++++|+.++.
T Consensus 146 l~~~--lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 146 VTEG--LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred HHHh--cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 4443 2334664 8999999999999999999999999977653
No 104
>KOG4667|consensus
Probab=99.33 E-value=2.9e-11 Score=109.87 Aligned_cols=197 Identities=16% Similarity=0.119 Sum_probs=134.7
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..-++|+.||. .+.-...+....+..+++.|+.++.+|++|-|+....|+-. ......+|+..+++++.....
T Consensus 31 gs~e~vvlcHGf-rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G----n~~~eadDL~sV~q~~s~~nr- 104 (269)
T KOG4667|consen 31 GSTEIVVLCHGF-RSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG----NYNTEADDLHSVIQYFSNSNR- 104 (269)
T ss_pred CCceEEEEeecc-ccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC----cccchHHHHHHHHHHhccCce-
Confidence 566789999985 34434445556788899999999999999988766555542 333456999999999965322
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcc---cccccCCC------------CCHHHH
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY---SESEFGSP------------NNKTHF 630 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~---~~~~~g~~------------~~~~~~ 630 (734)
---+|.|||-||..++..+...++ ..-+|..+|-.|.........++. |..+-|.. ..++-.
T Consensus 105 --~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSl 181 (269)
T KOG4667|consen 105 --VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESL 181 (269)
T ss_pred --EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHH
Confidence 123789999999999999998887 467788888777665543333322 22221211 111111
Q ss_pred -HHHHhC-Cc-cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch
Q psy4818 631 -HNLLSY-SP-LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL 707 (734)
Q Consensus 631 -~~~~~~-sp-~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (734)
+.|..- ++ ...|+ +.+| +|-+||..|..||.+++.+|++.+..+ .|.+.+|+.|.+....
T Consensus 182 mdrLntd~h~aclkId-----~~C~-VLTvhGs~D~IVPve~AkefAk~i~nH-----------~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 182 MDRLNTDIHEACLKID-----KQCR-VLTVHGSEDEIVPVEDAKEFAKIIPNH-----------KLEIIEGADHNYTGHQ 244 (269)
T ss_pred HHHHhchhhhhhcCcC-----ccCc-eEEEeccCCceeechhHHHHHHhccCC-----------ceEEecCCCcCccchh
Confidence 111110 01 01232 6787 999999999999999999999888654 6888899999998654
Q ss_pred H
Q psy4818 708 M 708 (734)
Q Consensus 708 ~ 708 (734)
.
T Consensus 245 ~ 245 (269)
T KOG4667|consen 245 S 245 (269)
T ss_pred h
Confidence 4
No 105
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.33 E-value=2.3e-11 Score=128.71 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=79.3
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCcc--ccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCch
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT--FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 549 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~--~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~ 549 (734)
+..+.|.|.. ....+.| ||++||-........ -...+..+|+++||.|+++|+||.+..... ........
T Consensus 48 ~~l~~~~~~~-~~~~~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~~~~d~~~ 119 (350)
T TIGR01836 48 VVLYRYTPVK-DNTHKTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------LTLDDYIN 119 (350)
T ss_pred EEEEEecCCC-CcCCCCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------CCHHHHHH
Confidence 4455555542 1122345 777787422211110 012356677778999999999985431110 00011112
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML 606 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~ 606 (734)
+|+.++++++.++. ..+++.++|||+||.+++.++..+|+.++++|+.++.+++.
T Consensus 120 ~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 120 GYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 35677888887763 44689999999999999999999999999999988877653
No 106
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.33 E-value=1.7e-11 Score=131.53 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=75.8
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|+||++||..+.... |.. ....|.+ +|.|+++|+||.|.... ......++++.+.+..+++. .
T Consensus 129 ~~~~~vl~~HG~~~~~~~--~~~-~~~~l~~-~~~v~~~d~~g~G~s~~--------~~~~~~~~~~~~~~~~~~~~--~ 194 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN--WLF-NHAALAA-GRPVIALDLPGHGASSK--------AVGAGSLDELAAAVLAFLDA--L 194 (371)
T ss_pred CCCCeEEEECCCCCccch--HHH-HHHHHhc-CCEEEEEcCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHh--c
Confidence 346789999986554433 222 2345664 79999999999665431 12234577777777776654 5
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
++.++.++|||+||++++.++.++|+.++++|+.+|.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 6678999999999999999999999999999988765
No 107
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.32 E-value=3.8e-11 Score=127.19 Aligned_cols=130 Identities=16% Similarity=0.125 Sum_probs=80.8
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc---------cccHHH--HHHHHhcCeEEEEEeccc--CCCCCc
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP---------TFSISR--CMFLRHFNGIYAIPNIRG--GGELGE 534 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~---------~~~~~~--~~~l~~~G~~v~~~~~rG--~~~~g~ 534 (734)
+|.+|....+-+.+ ....|.||++||-.++.... .|.... ...|...+|.|+++|+|| +|..+.
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 34455444443321 12357899999976644211 122211 112334699999999999 443332
Q ss_pred -hhhhcccc---ccCCCchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 535 -DWHNAGRL---LKKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 535 -~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
++...+.. ......++|+.+.+..++++- ..++ +.++|+|+||.+++.++.++|++++++|+.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 22222110 112356788887777666652 3356 999999999999999999999999988887664
No 108
>PLN02578 hydrolase
Probab=99.31 E-value=3.4e-11 Score=127.55 Aligned_cols=95 Identities=14% Similarity=0.026 Sum_probs=64.8
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchh----HHHHHHHHHHHcCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD----DFQAAAEYMINKKY 564 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~----D~~~~~~~l~~~~~ 564 (734)
|.||++||..+.... |.. ....|++ +|.|+++|+||.|...... ...+.+ |+.+.++.+.
T Consensus 87 ~~vvliHG~~~~~~~--w~~-~~~~l~~-~~~v~~~D~~G~G~S~~~~--------~~~~~~~~a~~l~~~i~~~~---- 150 (354)
T PLN02578 87 LPIVLIHGFGASAFH--WRY-NIPELAK-KYKVYALDLLGFGWSDKAL--------IEYDAMVWRDQVADFVKEVV---- 150 (354)
T ss_pred CeEEEECCCCCCHHH--HHH-HHHHHhc-CCEEEEECCCCCCCCCCcc--------cccCHHHHHHHHHHHHHHhc----
Confidence 568899997554332 332 2355664 8999999999966543221 112333 3333333332
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.+++.++|||+||+++..++.++|++++++|+.++
T Consensus 151 --~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 151 --KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred --cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 35799999999999999999999999999987654
No 109
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.31 E-value=2.4e-10 Score=121.46 Aligned_cols=204 Identities=16% Similarity=0.177 Sum_probs=125.5
Q ss_pred EEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcC----eEEEEEecccCCCCC
Q psy4818 459 TKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN----GIYAIPNIRGGGELG 533 (734)
Q Consensus 459 ~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~~~~g 533 (734)
.+.+++.|. -|.+..+++|.|+++. .+++|+|+++||.........+ ..+..|.+.| .+|+.+|.-.+....
T Consensus 180 ~~~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~--~~ld~li~~g~i~P~ivV~id~~~~~~R~ 256 (411)
T PRK10439 180 AKEIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVW--PALDSLTHRGQLPPAVYLLIDAIDTTHRS 256 (411)
T ss_pred eEEEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHH--HHHHHHHHcCCCCceEEEEECCCCccccc
Confidence 455556553 4667889999999875 5689999999997644332221 2233333457 346777753211111
Q ss_pred chhhhccccccCCCchhHHH--HHHHHHHHcC--CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQ--AAAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 609 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 609 (734)
.. ......+.+++ ..+-++.++. ..|+++.+|+|.|+||+.++.++.++|++|.++++.+|-+-+..
T Consensus 257 ~e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-- 327 (411)
T PRK10439 257 QE-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-- 327 (411)
T ss_pred cc-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC--
Confidence 00 01112333332 2334444432 35889999999999999999999999999999999998541110
Q ss_pred ccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC
Q psy4818 610 KFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 610 ~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~ 689 (734)
..+. ......+.+.+.. ... ... .++|.+|..|... +....++++.|+++ |.
T Consensus 328 ----------~~~~-~~~~l~~~l~~~~----~~~----~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~-------G~ 379 (411)
T PRK10439 328 ----------RGGQ-QEGVLLEQLKAGE----VSA----RGL-RIVLEAGRREPMI-MRANQALYAQLHPA-------GH 379 (411)
T ss_pred ----------ccCC-chhHHHHHHHhcc----cCC----CCc-eEEEeCCCCCchH-HHHHHHHHHHHHHC-------CC
Confidence 0010 0111122222210 000 111 2899999988543 56789999999998 99
Q ss_pred cEEEEEeCCCCCCC
Q psy4818 690 PLLLRVEQDAGHGQ 703 (734)
Q Consensus 690 ~~~~~~~~~~gH~~ 703 (734)
++.+.+++| ||..
T Consensus 380 ~~~~~~~~G-GHd~ 392 (411)
T PRK10439 380 SVFWRQVDG-GHDA 392 (411)
T ss_pred cEEEEECCC-CcCH
Confidence 999999987 7965
No 110
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.31 E-value=2.4e-12 Score=126.97 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=73.6
Q ss_pred EEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcE
Q psy4818 491 IIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYI 570 (734)
Q Consensus 491 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 570 (734)
||++||..+.. ..|.. +...|+ +||.|+++|+||.|... ... ......+++....+..++++ +..+++
T Consensus 1 vv~~hG~~~~~--~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~---~~~---~~~~~~~~~~~~~l~~~l~~--~~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDP-LAEALA-RGYRVIAFDLPGHGRSD---PPP---DYSPYSIEDYAEDLAELLDA--LGIKKV 68 (228)
T ss_dssp EEEE-STTTTG--GGGHH-HHHHHH-TTSEEEEEECTTSTTSS---SHS---SGSGGSHHHHHHHHHHHHHH--TTTSSE
T ss_pred eEEECCCCCCH--HHHHH-HHHHHh-CCCEEEEEecCCccccc---ccc---ccCCcchhhhhhhhhhcccc--cccccc
Confidence 78999986665 34444 456666 69999999999955432 111 12234556666665555554 223689
Q ss_pred EEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy4818 571 TIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 605 (734)
Q Consensus 571 ~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~ 605 (734)
.++|||+||.+++.++.++|+.++++|+..|....
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred cccccccccccccccccccccccccceeecccccc
Confidence 99999999999999999999999999999887753
No 111
>PRK07581 hypothetical protein; Validated
Probab=99.30 E-value=2.3e-11 Score=128.44 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc---cccCCCch-hHHHHHHHHHHHc
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR---LLKKQNCF-DDFQAAAEYMINK 562 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~---~~~~~~~~-~D~~~~~~~l~~~ 562 (734)
+.|+||+.||+.+....+.+.......|...+|.|+++|+||.|........... .......+ +|+.+....|.+.
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 4567777666544333222110000245445899999999996643311110000 00001112 4444434445443
Q ss_pred CCCCCCcE-EEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 563 KYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 563 ~~~d~~ri-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
...+++ .|+|+|+||++++.++.++|++++++|+.++
T Consensus 120 --lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 120 --FGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred --hCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 233574 7899999999999999999999999887754
No 112
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.29 E-value=4e-11 Score=121.32 Aligned_cols=196 Identities=15% Similarity=0.064 Sum_probs=113.0
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..+... .|.. ....|.+ .|.|+++|+||.|... . .....++++. +.+.+. ..
T Consensus 13 ~~~ivllHG~~~~~~--~w~~-~~~~L~~-~~~vi~~Dl~G~G~S~------~---~~~~~~~~~~---~~l~~~---~~ 73 (256)
T PRK10349 13 NVHLVLLHGWGLNAE--VWRC-IDEELSS-HFTLHLVDLPGFGRSR------G---FGALSLADMA---EAVLQQ---AP 73 (256)
T ss_pred CCeEEEECCCCCChh--HHHH-HHHHHhc-CCEEEEecCCCCCCCC------C---CCCCCHHHHH---HHHHhc---CC
Confidence 356999999654443 3444 4456665 7999999999965321 0 1123344443 344433 24
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-c------------cCc-------cccc--ccCCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-T------------IAY-------YSES--EFGSPN 625 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~------------~~~-------~~~~--~~g~~~ 625 (734)
+++.++|||+||+++..++.++|++++.+|+..+..-....... . ... .+.. .++.+.
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTET 153 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCch
Confidence 68999999999999999999999999999876553211000000 0 000 0000 001110
Q ss_pred CHHHH----------------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q psy4818 626 NKTHF----------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 683 (734)
Q Consensus 626 ~~~~~----------------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~ 683 (734)
..... ..+...+....+.. +++| +||++|++|..+|...+..+.+.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~i~~---- 224 (256)
T PRK10349 154 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQN----VSMP-FLRLYGYLDGLVPRKVVPMLDKLWPH---- 224 (256)
T ss_pred HHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhh----cCCC-eEEEecCCCccCCHHHHHHHHHhCCC----
Confidence 00000 01111111122222 6777 99999999999988776555554443
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHH
Q psy4818 684 LPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVF 720 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 720 (734)
.++.+++++||...-... .+....+.+|
T Consensus 225 -------~~~~~i~~~gH~~~~e~p--~~f~~~l~~~ 252 (256)
T PRK10349 225 -------SESYIFAKAAHAPFISHP--AEFCHLLVAL 252 (256)
T ss_pred -------CeEEEeCCCCCCccccCH--HHHHHHHHHH
Confidence 378889999998765543 2444445554
No 113
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.28 E-value=4.6e-11 Score=127.58 Aligned_cols=221 Identities=14% Similarity=0.098 Sum_probs=129.7
Q ss_pred CCcEEEEecCCCCCcCCcc-----------ccHHH---HHHHHhcCeEEEEEecccCC--CCCchhhhc--ccc---ccC
Q psy4818 487 RNPVIIYGYGGYGVSVLPT-----------FSISR---CMFLRHFNGIYAIPNIRGGG--ELGEDWHNA--GRL---LKK 545 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~-----------~~~~~---~~~l~~~G~~v~~~~~rG~~--~~g~~~~~~--~~~---~~~ 545 (734)
..|.||++||..+...... |...+ ..++. .+|.|+++|++|++ ..+...... +.. ...
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 3689999999876654211 22211 12334 59999999999832 222111100 000 111
Q ss_pred CCchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc----c-----cccccCc
Q psy4818 546 QNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR----F-----NKFTIAY 615 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~----~-----~~~~~~~ 615 (734)
..+++|+.+.+..+++.- ..++ ..++|+|+||.+++.++.++|++++++|+.++...... + .......
T Consensus 126 ~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~ 203 (379)
T PRK00175 126 VITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADP 203 (379)
T ss_pred cCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCC
Confidence 456788888777777652 3356 48999999999999999999999999988765331100 0 0000000
Q ss_pred cc---------------------------c------cccCC----C---------CCHHHH------HHHHhCCcc----
Q psy4818 616 YS---------------------------E------SEFGS----P---------NNKTHF------HNLLSYSPL---- 639 (734)
Q Consensus 616 ~~---------------------------~------~~~g~----~---------~~~~~~------~~~~~~sp~---- 639 (734)
.| . ..++. + ...+.+ ......++-
T Consensus 204 ~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~ 283 (379)
T PRK00175 204 DWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLY 283 (379)
T ss_pred CCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHH
Confidence 00 0 00100 0 000000 001111110
Q ss_pred -------------------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC-CC
Q psy4818 640 -------------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ-DA 699 (734)
Q Consensus 640 -------------------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~ 699 (734)
..+. .+++| +|+++|++|..+|+..+.++.+.+... ++.+.+.+++ ++
T Consensus 284 ~~~~~~~~d~~~~~~~d~~~~l~----~I~~P-tLvI~G~~D~~~p~~~~~~la~~i~~a-------~~~~~l~~i~~~~ 351 (379)
T PRK00175 284 LTRALDYFDPARGRGGDLAAALA----RIKAR-FLVVSFTSDWLFPPARSREIVDALLAA-------GADVSYAEIDSPY 351 (379)
T ss_pred HHHHHHhccccCCCCCCHHHHHh----cCCCC-EEEEEECCccccCHHHHHHHHHHHHhc-------CCCeEEEEeCCCC
Confidence 0012 26777 999999999999999999999999876 6666777775 99
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 700 GHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 700 gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
||...-... .+..+.+.+||.+.
T Consensus 352 GH~~~le~p--~~~~~~L~~FL~~~ 374 (379)
T PRK00175 352 GHDAFLLDD--PRYGRLVRAFLERA 374 (379)
T ss_pred CchhHhcCH--HHHHHHHHHHHHhh
Confidence 998764433 24566678888764
No 114
>KOG0279|consensus
Probab=99.28 E-value=9.7e-10 Score=103.62 Aligned_cols=232 Identities=13% Similarity=0.158 Sum_probs=140.1
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
++...+.....|+||++.. +. +....+++||+++|+..+.-.+.. ..-++++|||.+.|.-.+.|.
T Consensus 61 GHsH~v~dv~~s~dg~~al-S~----swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDk-------- 127 (315)
T KOG0279|consen 61 GHSHFVSDVVLSSDGNFAL-SA----SWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDK-------- 127 (315)
T ss_pred ccceEecceEEccCCceEE-ec----cccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcc--------
Confidence 3456688999999999644 33 334689999999998654333333 446899999999998765433
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|.+|+.-+.. ...+.+. .+..|+..+.|||...-.++.+. +....+.+||+.+. ...
T Consensus 128 --------Tiklwnt~g~c--k~t~~~~-~~~~WVscvrfsP~~~~p~Ivs~--s~DktvKvWnl~~~---------~l~ 185 (315)
T KOG0279|consen 128 --------TIKLWNTLGVC--KYTIHED-SHREWVSCVRFSPNESNPIIVSA--SWDKTVKVWNLRNC---------QLR 185 (315)
T ss_pred --------eeeeeeecccE--EEEEecC-CCcCcEEEEEEcCCCCCcEEEEc--cCCceEEEEccCCc---------chh
Confidence 56777654432 1112222 22568899999999643333332 23368999999882 112
Q ss_pred eeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
....+...... .+||||..+.. ++...+++++|++.++ .+..-+....+....+..+...+.....
T Consensus 186 ~~~~gh~~~v~t~~vSpDGslcas----Ggkdg~~~LwdL~~~k-----~lysl~a~~~v~sl~fspnrywL~~at~--- 253 (315)
T KOG0279|consen 186 TTFIGHSGYVNTVTVSPDGSLCAS----GGKDGEAMLWDLNEGK-----NLYSLEAFDIVNSLCFSPNRYWLCAATA--- 253 (315)
T ss_pred hccccccccEEEEEECCCCCEEec----CCCCceEEEEEccCCc-----eeEeccCCCeEeeEEecCCceeEeeccC---
Confidence 11112222222 39999986663 5567889999998765 1222222456666666663443333322
Q ss_pred eeEEEEECCCCceeeeeCCC-Cce--------EEeeccCcccceEEEEEec
Q psy4818 376 SVMDLHDLNTGKRLHSFPLD-LGQ--------ITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~-~g~--------v~~~~~~~d~~~l~~~~ss 417 (734)
+.|.+||++++..+..+... .|. ..++.++.||..++--+++
T Consensus 254 ~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td 304 (315)
T KOG0279|consen 254 TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTD 304 (315)
T ss_pred CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecC
Confidence 34999999887765555432 111 1245566667666655543
No 115
>KOG1838|consensus
Probab=99.28 E-value=3.1e-10 Score=115.91 Aligned_cols=242 Identities=15% Similarity=0.100 Sum_probs=152.6
Q ss_pred eEEEEEEEcCCCcEEeEEEEEecccc---CCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
.-++.-++..||..+..-++.+.+-. ..+..|+||++||-.+++.. .|-..+...+.++||.+++.|.||-++--
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~-~YVr~lv~~a~~~G~r~VVfN~RG~~g~~- 169 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE-SYVRHLVHEAQRKGYRVVVFNHRGLGGSK- 169 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh-HHHHHHHHHHHhCCcEEEEECCCCCCCCc-
Confidence 34555566778888888888665531 13578999999998777766 44444555667789999999999933221
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCCcchh--cccc
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALDM--LRFN 609 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d~--~~~~ 609 (734)
-.. ....-...-+|+..+++++.++. - ..++.++|.|+||.+....+.+.- .+.+|+++..|+--+ .+..
T Consensus 170 -LtT--pr~f~ag~t~Dl~~~v~~i~~~~-P-~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~ 244 (409)
T KOG1838|consen 170 -LTT--PRLFTAGWTEDLREVVNHIKKRY-P-QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI 244 (409)
T ss_pred -cCC--CceeecCCHHHHHHHHHHHHHhC-C-CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH
Confidence 000 11122234689999999998762 2 237999999999999999987643 366777777775311 0000
Q ss_pred ------------------------cc---ccCccc-----------------ccccCCCCCHHHHHHHHhCCccCCCCCC
Q psy4818 610 ------------------------KF---TIAYYS-----------------ESEFGSPNNKTHFHNLLSYSPLHNIKVP 645 (734)
Q Consensus 610 ------------------------~~---~~~~~~-----------------~~~~g~~~~~~~~~~~~~~sp~~~~~~p 645 (734)
.. .....| ...||.+. .-+++++.|+...++.
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~aSs~~~v~~- 320 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKKASSSNYVDK- 320 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhhcchhhhccc-
Confidence 00 000000 01223333 2356788899999987
Q ss_pred CCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC-CCc--hHHhHHHHHH-HHHHH
Q psy4818 646 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ-GTP--LMKSIEEMTD-IYVFL 721 (734)
Q Consensus 646 ~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~--~~~~~~~~~~-~~~fl 721 (734)
++.| +|++++.+|+.||.. +.-.-.. .. ++.+.+.+-.-+||-. ... .+. .-++.+ +.+|+
T Consensus 321 ---I~VP-~L~ina~DDPv~p~~-~ip~~~~--~~-------np~v~l~~T~~GGHlgfleg~~p~~-~~w~~~~l~ef~ 385 (409)
T KOG1838|consen 321 ---IKVP-LLCINAADDPVVPEE-AIPIDDI--KS-------NPNVLLVITSHGGHLGFLEGLWPSA-RTWMDKLLVEFL 385 (409)
T ss_pred ---cccc-EEEEecCCCCCCCcc-cCCHHHH--hc-------CCcEEEEEeCCCceeeeeccCCCcc-chhHHHHHHHHH
Confidence 8999 999999999999874 2211111 12 4567888888899943 211 121 233444 67777
Q ss_pred HHHc
Q psy4818 722 MKSL 725 (734)
Q Consensus 722 ~~~l 725 (734)
.+..
T Consensus 386 ~~~~ 389 (409)
T KOG1838|consen 386 GNAI 389 (409)
T ss_pred HHHH
Confidence 7654
No 116
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.25 E-value=1.9e-08 Score=104.05 Aligned_cols=240 Identities=13% Similarity=0.097 Sum_probs=138.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
+..+.|||||+.++.+.... ..|+++|+.+++.+...........+.|+|||+.++.+...
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~--------------- 93 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANED--------------- 93 (300)
T ss_pred CCceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---------------
Confidence 35689999999876554322 46999999998764322222223578999999977665421
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
...|+++++.+.. .+..+.... ...++.|+|||+++++.... .+.++.+|..++. ....+..+.
T Consensus 94 ~~~l~~~d~~~~~--~~~~~~~~~---~~~~~~~~~dg~~l~~~~~~---~~~~~~~d~~~~~--------~~~~~~~~~ 157 (300)
T TIGR03866 94 DNLVTVIDIETRK--VLAEIPVGV---EPEGMAVSPDGKIVVNTSET---TNMAHFIDTKTYE--------IVDNVLVDQ 157 (300)
T ss_pred CCeEEEEECCCCe--EEeEeeCCC---CcceEEECCCCCEEEEEecC---CCeEEEEeCCCCe--------EEEEEEcCC
Confidence 1268888887642 122222111 22468999999998875432 2456777877621 111111111
Q ss_pred cceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-----CceeEEEEE-eeCCEEEEEEEeCCcee
Q psy4818 304 DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAA-VANNKLIVHYIQNVRSV 377 (734)
Q Consensus 304 ~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~-~~~~~l~~~~~~~~~~~ 377 (734)
......|++||+.+++.+.. ...|+.+|+++++. ...+..... ......+.+ .+++.+++.... ...
T Consensus 158 ~~~~~~~s~dg~~l~~~~~~---~~~v~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~--~~~ 230 (300)
T TIGR03866 158 RPRFAEFTADGKELWVSSEI---GGTVSVIDVATRKV--IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGP--ANR 230 (300)
T ss_pred CccEEEECCCCCEEEEEcCC---CCEEEEEEcCccee--eeeeeecccccccccCCccceEECCCCCEEEEEcCC--CCe
Confidence 22223489999988775443 24689999987541 122211110 111112323 343444444322 246
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+||+.+++..+.+... ..+..++++++++.++.... .-..+.++|+
T Consensus 231 i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~ 278 (300)
T TIGR03866 231 VAVVDAKTYEVLDYLLVG-QRVWQLAFTPDEKYLLTTNG---VSNDVSVIDV 278 (300)
T ss_pred EEEEECCCCcEEEEEEeC-CCcceEEECCCCCEEEEEcC---CCCeEEEEEC
Confidence 999999888765544322 23556778899887765422 1236999999
No 117
>KOG0318|consensus
Probab=99.23 E-value=2e-08 Score=102.61 Aligned_cols=258 Identities=12% Similarity=0.089 Sum_probs=149.8
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-cccccc--cccccCeeEEEcCCcEEEEEEEecCC-CC--
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVL--KNVKFPSISWTHDHKGFFYNQYCDIN-GT-- 213 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~-~~-- 213 (734)
+...+.-..+||.|-||| +|+....+++||....+ .+..+. -...+..++|+.||++|+.+..-... +.
T Consensus 58 H~~~vtVAkySPsG~yiA-----SGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F 132 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIA-----SGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVF 132 (603)
T ss_pred ccceeEEEEeCCCceEEe-----ecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEE
Confidence 346677899999999988 45555679999976533 333221 11134689999999999987642210 00
Q ss_pred --CCC----Ccc--------cccCCcEEEEEECCCCCCCCeeEEecC---------CCCeeEEEEEEecCCcEEEEEEec
Q psy4818 214 --ADG----TET--------TAHMGQKIYYHVLGTEQDKDIPVVEFP---------NGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 214 --~~~----~~~--------~~~~~~~l~~~~l~t~~~~~~~v~~~~---------~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
+.| ..+ ..-++.+=+|.--++. ..-+.+|+.| ++..|+..+.+||||+..+-...
T Consensus 133 ~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sd-Dn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs- 210 (603)
T KOG0318|consen 133 LWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSD-DNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS- 210 (603)
T ss_pred EecCCCccceeeccceeEeeeeccCCCceEEEeccC-CCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC-
Confidence 000 000 0001111122111111 1123345543 23456778999999998774332
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeee---ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 346 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~---~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 346 (734)
...++++|-.+|+. +-.+- .+....+.. |+||+++++-.+.. ..+-.||+.+.+. .+++
T Consensus 211 ---Dgki~iyDGktge~--------vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD----kt~KIWdVs~~sl--v~t~ 273 (603)
T KOG0318|consen 211 ---DGKIYIYDGKTGEK--------VGELEDSDAHKGSIFALSWSPDSTQFLTVSAD----KTIKIWDVSTNSL--VSTW 273 (603)
T ss_pred ---CccEEEEcCCCccE--------EEEecCCCCccccEEEEEECCCCceEEEecCC----ceEEEEEeeccce--EEEe
Confidence 26899999887432 11121 122334444 99999998865543 3466778776541 2333
Q ss_pred ecCCC-CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEE
Q psy4818 347 IPEDE-NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 425 (734)
Q Consensus 347 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~ 425 (734)
.-+.. ....-++.|.+ ++|+..... ..|-.+++.+++.++.+..+.-.|..++.++|++ .+|+.+-. +.+-
T Consensus 274 ~~~~~v~dqqvG~lWqk-d~lItVSl~---G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~-~i~SgsyD---G~I~ 345 (603)
T KOG0318|consen 274 PMGSTVEDQQVGCLWQK-DHLITVSLS---GTINYLNPSDPSVLKVISGHNKSITALTVSPDGK-TIYSGSYD---GHIN 345 (603)
T ss_pred ecCCchhceEEEEEEeC-CeEEEEEcC---cEEEEecccCCChhheecccccceeEEEEcCCCC-EEEeeccC---ceEE
Confidence 33321 23334556665 676655433 3577788878887777877777788899999884 44454433 4677
Q ss_pred EEeC
Q psy4818 426 HCNI 429 (734)
Q Consensus 426 ~~d~ 429 (734)
.||.
T Consensus 346 ~W~~ 349 (603)
T KOG0318|consen 346 SWDS 349 (603)
T ss_pred EEec
Confidence 7887
No 118
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.20 E-value=5.2e-10 Score=113.70 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=75.0
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
++..|.||++||..+... .|.. ....|.++||.|+++|+||.|... .. ......+++....+..++++..
T Consensus 15 ~~~~p~vvliHG~~~~~~--~w~~-~~~~L~~~g~~vi~~dl~g~G~s~---~~----~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSW--CWYK-IRCLMENSGYKVTCIDLKSAGIDQ---SD----ADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred cCCCCeEEEECCCCCCcC--cHHH-HHHHHHhCCCEEEEecccCCCCCC---CC----cccCCCHHHHHHHHHHHHHhcC
Confidence 456789999999765443 4443 345676679999999999965321 00 1112456666665555544421
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
..+++.++||||||+++..++.++|++++++|..++.
T Consensus 85 -~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 85 -ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred -CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 2368999999999999999999999999999887664
No 119
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.19 E-value=8.6e-12 Score=125.73 Aligned_cols=137 Identities=18% Similarity=0.194 Sum_probs=91.1
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcC----eEEEEEecccCCCCCchhhhc-----
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN----GIYAIPNIRGGGELGEDWHNA----- 539 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~~~~g~~~~~~----- 539 (734)
|..+.++|+.|+++...+++|+|++.||................++.+ | .++++++.-+.......|...
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~-~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAE-GKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHH-HTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHh-CCCCceEEEEEeccccccccccccccccccc
Confidence 667899999999987789999999999951111100111112223333 4 556666655444233344422
Q ss_pred -cccccCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc
Q psy4818 540 -GRLLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML 606 (734)
Q Consensus 540 -~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~ 606 (734)
.....+...+++++ ..+.++.++..+++++.+|+|+|+||+.++.++.++|++|.++++.+|.++..
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 11112223455654 35777777766777779999999999999999999999999999999987654
No 120
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.19 E-value=2.4e-08 Score=100.73 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=70.8
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC--CCCceEEEE
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK--SGSDWNTLH 171 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~--~g~~~~~l~ 171 (734)
-.|-..|+.+.|+..+. ||..+...|+.+.|+.- ...+..+.+||||+++||+.-- ++-...+||
T Consensus 44 l~PDI~GD~IiFt~~Dd------lWe~slk~g~~~ritS~-------lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly 110 (668)
T COG4946 44 LNPDIYGDRIIFTCCDD------LWEYSLKDGKPLRITSG-------LGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLY 110 (668)
T ss_pred cCCcccCcEEEEEechH------HHHhhhccCCeeEEecc-------cceeccccCCCCCcEEEEEEEEecCCCccccEE
Confidence 44557789999988765 56555556666666541 1235679999999999995432 222345899
Q ss_pred EEECCCCCcccccccccccC-eeEEEcCCcEEEEEEE
Q psy4818 172 IKDVDTGKDYPEVLKNVKFP-SISWTHDHKGFFYNQY 207 (734)
Q Consensus 172 v~dl~~g~~~~~~~~~~~~~-~~~wSpDg~~l~y~~~ 207 (734)
+++.++|+....+-.+..+. -..|+|||+-|+++..
T Consensus 111 ~v~~e~Ge~kRiTyfGr~fT~VaG~~~dg~iiV~TD~ 147 (668)
T COG4946 111 VVPSEDGEAKRITYFGRRFTRVAGWIPDGEIIVSTDF 147 (668)
T ss_pred EEeCCCCcEEEEEEeccccceeeccCCCCCEEEEecc
Confidence 99999999877665555443 4579999998887754
No 121
>KOG3101|consensus
Probab=99.19 E-value=5.5e-11 Score=107.40 Aligned_cols=211 Identities=15% Similarity=0.148 Sum_probs=127.1
Q ss_pred cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--ccCC----------CCCchhh
Q psy4818 470 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGG----------ELGEDWH 537 (734)
Q Consensus 470 ~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~~----------~~g~~~~ 537 (734)
..+..-+|.|+....+++.|+|.|+-|-........-...+++...+.|.+|+.||- ||-. |.|..|+
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFY 105 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFY 105 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeE
Confidence 457778888988766777999999988533322111112245666788999999985 5521 1122233
Q ss_pred hccccc-cCC--CchhHHHHHHHHHHHc--CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc
Q psy4818 538 NAGRLL-KKQ--NCFDDFQAAAEYMINK--KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 612 (734)
Q Consensus 538 ~~~~~~-~~~--~~~~D~~~~~~~l~~~--~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 612 (734)
-....+ |.. ..++=+..-+-.++.. --+|+.+++|.||||||+-++.+..++|.+|+.+.+.+|+.+...-..
T Consensus 106 vnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW-- 183 (283)
T KOG3101|consen 106 VNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW-- 183 (283)
T ss_pred EecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc--
Confidence 222211 111 1122222222222222 237999999999999999999999999999999999999998764310
Q ss_pred cCc-ccccccCCCCCHHHHHHHHhCCc------cCCCCCCCCCccCCcEEEEecCCCCCCCChH--HHHHHHHHHhhhCC
Q psy4818 613 IAY-YSESEFGSPNNKTHFHNLLSYSP------LHNIKVPPNNTQYPATLVLTGDHDDRVPPLH--SYKFIATLQEKIGS 683 (734)
Q Consensus 613 ~~~-~~~~~~g~~~~~~~~~~~~~~sp------~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~--~~~~~~~L~~~~~~ 683 (734)
+. ++....|. ++..+ ..|++ |.++.. - +||-+|..|...+ .| +..+.++.+..
T Consensus 184 -GqKAf~gYLG~--~ka~W---~~yDat~lik~y~~~~~-------~-ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~--- 245 (283)
T KOG3101|consen 184 -GQKAFTGYLGD--NKAQW---EAYDATHLIKNYRGVGD-------D-ILIDQGAADNFLA-EQLLPENLLEACKAT--- 245 (283)
T ss_pred -hHHHhhcccCC--ChHHH---hhcchHHHHHhcCCCCc-------c-EEEecCccchhhh-hhcChHHHHHHhhcc---
Confidence 11 11112243 33322 23333 333333 1 9999999998665 33 34444444322
Q ss_pred CCCCCCcEEEEEeCCCCCCC
Q psy4818 684 LPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~gH~~ 703 (734)
...++.++.-++-.|..
T Consensus 246 ---~~~~v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 246 ---WQAPVVFRLQEGYDHSY 262 (283)
T ss_pred ---ccccEEEEeecCCCcce
Confidence 24788999999999964
No 122
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.19 E-value=1.2e-08 Score=103.80 Aligned_cols=304 Identities=13% Similarity=0.051 Sum_probs=152.5
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEE
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 173 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~ 173 (734)
+++..+|.++.|..+..+ ...||.++..+++.++|+|...- . ..+..+||+.+.|.|..+. ..|+.+
T Consensus 41 ~~ft~dG~kllF~s~~dg--~~nly~lDL~t~~i~QLTdg~g~---~---~~g~~~s~~~~~~~Yv~~~-----~~l~~v 107 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDG--NRNLYLLDLATGEITQLTDGPGD---N---TFGGFLSPDDRALYYVKNG-----RSLRRV 107 (386)
T ss_dssp --B-TTS-EEEEEE-TTS--S-EEEEEETTT-EEEE---SS-B-------TTT-EE-TTSSEEEEEETT-----TEEEEE
T ss_pred CCcCCCCCEEEEEeccCC--CcceEEEEcccCEEEECccCCCC---C---ccceEEecCCCeEEEEECC-----CeEEEE
Confidence 556688999999777553 46699999999999999995421 1 1246789999999997642 368999
Q ss_pred ECCCCCcccc-cccccccCeeEEE--cCCcEEEEEEEecCCCCC-CCC-----cccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 174 DVDTGKDYPE-VLKNVKFPSISWT--HDHKGFFYNQYCDINGTA-DGT-----ETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 174 dl~~g~~~~~-~~~~~~~~~~~wS--pDg~~l~y~~~~~~~~~~-~~~-----~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
|++|++.... ...........|+ .|++.++.+......... ... ........+|+.+++.+++ ...|++
T Consensus 108 dL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~--~~~v~~ 185 (386)
T PF14583_consen 108 DLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE--RKVVFE 185 (386)
T ss_dssp ETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT----EEEEEE
T ss_pred ECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc--eeEEEe
Confidence 9999875321 1121111345674 467777776653321100 000 0012345689999999875 446666
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCC---ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEe
Q psy4818 245 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQG---SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKT 321 (734)
Q Consensus 245 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~---~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 321 (734)
+. .|...+.+||..-.++...+++... .+||+++.++....++ .+.......+++.|++||..|+|.+
T Consensus 186 ~~---~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v------~~~~~~e~~gHEfw~~DG~~i~y~~ 256 (386)
T PF14583_consen 186 DT---DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKV------HRRMEGESVGHEFWVPDGSTIWYDS 256 (386)
T ss_dssp ES---S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EES------S---TTEEEEEEEE-TTSS-EEEEE
T ss_pred cC---ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceee------ecCCCCcccccccccCCCCEEEEEe
Confidence 53 3777889999655444444443332 5999999887322111 1122223345567999999998876
Q ss_pred C-CCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC--------------CceeEEEEECCCC
Q psy4818 322 T-KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN--------------VRSVMDLHDLNTG 386 (734)
Q Consensus 322 ~-~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~~~~l~~~dl~~g 386 (734)
- ..+..+-|+.+++++++ ...+...+.. .-+....++.+++--..+ ..+.||+++++.+
T Consensus 257 ~~~~~~~~~i~~~d~~t~~----~~~~~~~p~~--~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~ 330 (386)
T PF14583_consen 257 YTPGGQDFWIAGYDPDTGE----RRRLMEMPWC--SHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAG 330 (386)
T ss_dssp EETTT--EEEEEE-TTT------EEEEEEE-SE--EEEEE-TTSSEEEEEE-------------------EEEEEETTTT
T ss_pred ecCCCCceEEEeeCCCCCC----ceEEEeCCce--eeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccC
Confidence 4 34445669999998876 2223322221 122222224444322211 1247888898766
Q ss_pred ceeeeeCCCC-----------ceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 387 KRLHSFPLDL-----------GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 387 ~~~~~l~~~~-----------g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+. ..|.... -.-..++++||++.++|. |.+.-++.||..++
T Consensus 331 ~~-~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~-Sd~~G~~~vY~v~i 382 (386)
T PF14583_consen 331 RF-RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFR-SDMEGPPAVYLVEI 382 (386)
T ss_dssp EE-EEEEE-------BTTBSSTT----EE-TTSSEEEEE-E-TTSS-EEEEEE-
T ss_pred ce-eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEE-CCCCCCccEEEEeC
Confidence 54 2221110 011246788999888876 45566788999988
No 123
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.18 E-value=3.6e-10 Score=119.34 Aligned_cols=182 Identities=16% Similarity=0.095 Sum_probs=104.9
Q ss_pred HHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhcCCCc
Q psy4818 514 LRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPEL 592 (734)
Q Consensus 514 l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~ 592 (734)
|...+|.|+++|+||.|+.. . ....++|+...+..+++.- +.++ +.++|+|+||++++.++.++|++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~----~------~~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~~ 162 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSL----D------VPIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPAR 162 (343)
T ss_pred cCccccEEEEEeCCCCCCCC----C------CCCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChHh
Confidence 43348999999999954321 1 1123455555555555442 2334 57999999999999999999999
Q ss_pred eeEEEEcCCcchhc-------ccccc------c-----cC---------c-c-----cccccCCCCC-------HHHH--
Q psy4818 593 YGAALILVGALDML-------RFNKF------T-----IA---------Y-Y-----SESEFGSPNN-------KTHF-- 630 (734)
Q Consensus 593 ~~a~v~~~~~~d~~-------~~~~~------~-----~~---------~-~-----~~~~~g~~~~-------~~~~-- 630 (734)
++++|+.++..... ..... . .+ . . +...|..... ....
T Consensus 163 V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T PRK08775 163 VRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDY 242 (343)
T ss_pred hheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHH
Confidence 99999887643210 00000 0 00 0 0 0001111000 0000
Q ss_pred ------HHHHhCCc-----------cC--CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcE
Q psy4818 631 ------HNLLSYSP-----------LH--NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 691 (734)
Q Consensus 631 ------~~~~~~sp-----------~~--~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~ 691 (734)
......++ .. .+. .++.| +||++|++|..+|+.++.++.+.+.. ..
T Consensus 243 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~I~~P-tLvi~G~~D~~~p~~~~~~~~~~i~p----------~a 307 (343)
T PRK08775 243 LDAAGAQYVARTPVNAYLRLSESIDLHRVDPE----AIRVP-TVVVAVEGDRLVPLADLVELAEGLGP----------RG 307 (343)
T ss_pred HHHHHHHHHHhcChhHHHHHHHHHhhcCCChh----cCCCC-eEEEEeCCCEeeCHHHHHHHHHHcCC----------CC
Confidence 00111111 01 122 27777 99999999999999988887776631 23
Q ss_pred EEEEeCC-CCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 692 LLRVEQD-AGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 692 ~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
++.++++ +||...-... .+....+.+||.+.
T Consensus 308 ~l~~i~~~aGH~~~lE~P--e~~~~~l~~FL~~~ 339 (343)
T PRK08775 308 SLRVLRSPYGHDAFLKET--DRIDAILTTALRST 339 (343)
T ss_pred eEEEEeCCccHHHHhcCH--HHHHHHHHHHHHhc
Confidence 6788884 9998765443 35555677888653
No 124
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.17 E-value=4.8e-10 Score=112.33 Aligned_cols=99 Identities=14% Similarity=0.056 Sum_probs=69.0
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..++.. .|.... ..| + +|.|+++|+||.|.... . ....++++...+..++++. ..
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~-~~l-~-~~~vi~~D~~G~G~S~~---~------~~~~~~~~~~~l~~~l~~~--~~ 65 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVG-EAL-P-DYPRLYIDLPGHGGSAA---I------SVDGFADVSRLLSQTLQSY--NI 65 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHH-HHc-C-CCCEEEecCCCCCCCCC---c------cccCHHHHHHHHHHHHHHc--CC
Confidence 478999999876654 444433 455 3 79999999999654321 1 1124556555555555542 34
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCC-ceeEEEEcCCc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGA 602 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~ 602 (734)
+++.++|||+||.+++.++.++|+ +++++|+.++.
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 689999999999999999999865 48888876644
No 125
>KOG3043|consensus
Probab=99.16 E-value=8.4e-10 Score=101.69 Aligned_cols=198 Identities=17% Similarity=0.261 Sum_probs=133.8
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc--------hhhhccccc
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE--------DWHNAGRLL 543 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~--------~~~~~~~~~ 543 (734)
+.+++..... .+ -+||.+---+|.+... -...+..++..||.|++||+-.|.-+.. .|.+ +.
T Consensus 28 ldaYv~gs~~----~~-~~li~i~DvfG~~~~n--~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~ 97 (242)
T KOG3043|consen 28 LDAYVVGSTS----SK-KVLIVIQDVFGFQFPN--TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GH 97 (242)
T ss_pred eeEEEecCCC----CC-eEEEEEEeeeccccHH--HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cC
Confidence 5566654332 12 3455544444433221 1224566777899999999975521111 1222 23
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCC
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 623 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 623 (734)
.-...+.|+.+.++||..++ ++.+||++|..+||-++..+.+..| +|.++++..|..
T Consensus 98 ~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~-------------------- 154 (242)
T KOG3043|consen 98 SPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF-------------------- 154 (242)
T ss_pred CcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc--------------------
Confidence 34566899999999999764 5679999999999999999988877 788888877633
Q ss_pred CCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC
Q psy4818 624 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 624 ~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~ 703 (734)
.+.++. .+ +++| +|++.|+.|..+|+.....+-++|++. . ..-..+.+|++-+|+|
T Consensus 155 -~d~~D~---------~~-------vk~P-ilfl~ae~D~~~p~~~v~~~ee~lk~~----~--~~~~~v~~f~g~~HGf 210 (242)
T KOG3043|consen 155 -VDSADI---------AN-------VKAP-ILFLFAELDEDVPPKDVKAWEEKLKEN----P--AVGSQVKTFSGVGHGF 210 (242)
T ss_pred -CChhHH---------hc-------CCCC-EEEEeecccccCCHHHHHHHHHHHhcC----c--ccceeEEEcCCccchh
Confidence 111111 23 4556 999999999999999888888888765 1 1225799999999998
Q ss_pred CC-------ch--HHhHHHHHHHHHHHHHHcC
Q psy4818 704 GT-------PL--MKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 704 ~~-------~~--~~~~~~~~~~~~fl~~~l~ 726 (734)
.. ++ ....+.+++++.||.++|.
T Consensus 211 ~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 211 VARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred hhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 63 21 2235677889999998873
No 126
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.15 E-value=2e-09 Score=113.64 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=75.1
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||.+.... .|.. .+..|++ +|.|+++|+||.|.... ... .......++++...+..++++- .
T Consensus 126 ~~~~ivllHG~~~~~~--~w~~-~~~~L~~-~~~Via~DlpG~G~S~~---p~~-~~~~~ys~~~~a~~l~~~i~~l--~ 195 (383)
T PLN03084 126 NNPPVLLIHGFPSQAY--SYRK-VLPVLSK-NYHAIAFDWLGFGFSDK---PQP-GYGFNYTLDEYVSSLESLIDEL--K 195 (383)
T ss_pred CCCeEEEECCCCCCHH--HHHH-HHHHHhc-CCEEEEECCCCCCCCCC---Ccc-cccccCCHHHHHHHHHHHHHHh--C
Confidence 4578999999765443 3443 3456765 99999999999553221 100 0011345677777666666552 3
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
.+++.|+|+|+||.+++.++.++|++++++|+.+|..
T Consensus 196 ~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 196 SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 3579999999999999999999999999999888753
No 127
>KOG0293|consensus
Probab=99.14 E-value=4.6e-09 Score=104.02 Aligned_cols=240 Identities=15% Similarity=0.137 Sum_probs=140.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-ccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..+-...||++|+|||-++.+. ..-||.+.-.+.-.+..+. +.. .+..+.||||.++|+-+..++
T Consensus 225 dEVWfl~FS~nGkyLAsaSkD~---Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e---------- 291 (519)
T KOG0293|consen 225 DEVWFLQFSHNGKYLASASKDS---TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE---------- 291 (519)
T ss_pred CcEEEEEEcCCCeeEeeccCCc---eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH----------
Confidence 3467899999999999665432 1234444333331121121 111 236789999999999887654
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.+++|++.++.. +..+... ......+.+|-|||..++.- .....++.||+++.. ...|+-.
T Consensus 292 ------~~~lwDv~tgd~--~~~y~~~-~~~S~~sc~W~pDg~~~V~G----s~dr~i~~wdlDgn~------~~~W~gv 352 (519)
T KOG0293|consen 292 ------VLSLWDVDTGDL--RHLYPSG-LGFSVSSCAWCPDGFRFVTG----SPDRTIIMWDLDGNI------LGNWEGV 352 (519)
T ss_pred ------heeeccCCcchh--hhhcccC-cCCCcceeEEccCCceeEec----CCCCcEEEecCCcch------hhccccc
Confidence 488999988753 2333322 11234578999999997632 222689999998722 1233321
Q ss_pred eccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 300 IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 300 ~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
-. ...+. ..++||++++.++.. .++..++..+... +.++.+. ..+..+.+..++++++....+ ..+
T Consensus 353 r~--~~v~dlait~Dgk~vl~v~~d----~~i~l~~~e~~~d---r~lise~--~~its~~iS~d~k~~LvnL~~--qei 419 (519)
T KOG0293|consen 353 RD--PKVHDLAITYDGKYVLLVTVD----KKIRLYNREARVD---RGLISEE--QPITSFSISKDGKLALVNLQD--QEI 419 (519)
T ss_pred cc--ceeEEEEEcCCCcEEEEEecc----cceeeechhhhhh---hcccccc--CceeEEEEcCCCcEEEEEccc--Cee
Confidence 11 11222 278999999887743 3577777765431 3345443 455666666667776665544 579
Q ss_pred EEEECCCCceeeeeCCC-CceE-EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 379 DLHDLNTGKRLHSFPLD-LGQI-THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 379 ~~~dl~~g~~~~~l~~~-~g~v-~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+||++..+.+++..+. .+.. ..-++-...+.++.+.|. -..+|+++.
T Consensus 420 ~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSE---D~kvyIWhr 469 (519)
T KOG0293|consen 420 HLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSE---DSKVYIWHR 469 (519)
T ss_pred EEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCC---CceEEEEEc
Confidence 99999755555555444 2322 122222222345444433 358999998
No 128
>KOG4627|consensus
Probab=99.14 E-value=8.6e-11 Score=105.82 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=141.0
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.|-- .|. --+-++.|. ...|++|++||||..............-+.++||+|+.++|--..+
T Consensus 44 r~e~l~Yg~-~g~-q~VDIwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q------ 110 (270)
T KOG4627|consen 44 RVEHLRYGE-GGR-QLVDIWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ------ 110 (270)
T ss_pred chhccccCC-CCc-eEEEEecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc------
Confidence 455555532 332 223444453 4678999999999776554443333344556799999998754221
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhccccccccCcc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFNKFTIAYY 616 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~~~~~ 616 (734)
...-...+.++...++|+.+. +-..+.+.+.|||+|+.|++.++++. ..++.+++..+|+.++......+.+
T Consensus 111 ----~htL~qt~~~~~~gv~filk~-~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g-- 183 (270)
T KOG4627|consen 111 ----VHTLEQTMTQFTHGVNFILKY-TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG-- 183 (270)
T ss_pred ----cccHHHHHHHHHHHHHHHHHh-cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc--
Confidence 111124577888899998765 33445699999999999999988753 2367899999999988765443322
Q ss_pred cccccCCCCCHHHHHHHHhCCcc-CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy4818 617 SESEFGSPNNKTHFHNLLSYSPL-HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 695 (734)
Q Consensus 617 ~~~~~g~~~~~~~~~~~~~~sp~-~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 695 (734)
...|.-... ....|+- ...+. ++.| +||+.+.+|.---++|.+.|+..++.+ .+..
T Consensus 184 --~dlgLt~~~-----ae~~Scdl~~~~~----v~~~-ilVv~~~~espklieQnrdf~~q~~~a-----------~~~~ 240 (270)
T KOG4627|consen 184 --NDLGLTERN-----AESVSCDLWEYTD----VTVW-ILVVAAEHESPKLIEQNRDFADQLRKA-----------SFTL 240 (270)
T ss_pred --cccCcccch-----hhhcCccHHHhcC----ceee-eeEeeecccCcHHHHhhhhHHHHhhhc-----------ceee
Confidence 122222111 1233332 12222 4455 999999999988899999999999876 5778
Q ss_pred eCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 696 EQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+++.+|.-.-... +.....+..|+.+.+
T Consensus 241 f~n~~hy~I~~~~--~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 241 FKNYDHYDIIEET--AIDDSDVSRFLRNIE 268 (270)
T ss_pred cCCcchhhHHHHh--ccccchHHHHHHHHh
Confidence 8999995321111 122234566666543
No 129
>KOG0271|consensus
Probab=99.12 E-value=1.1e-08 Score=100.42 Aligned_cols=123 Identities=13% Similarity=0.127 Sum_probs=79.1
Q ss_pred CCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC
Q psy4818 273 QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE 351 (734)
Q Consensus 273 ~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 351 (734)
+...+++|+... . ..+..+++.+......+ ||||+++|+-.+-. ..+-+|+..+++ .-..+.+.-
T Consensus 344 Dd~tlflW~p~~-~------kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD----kSVkLW~g~tGk---~lasfRGHv 409 (480)
T KOG0271|consen 344 DDFTLFLWNPFK-S------KKPITRMTGHQALVNHVSFSPDGRYIASASFD----KSVKLWDGRTGK---FLASFRGHV 409 (480)
T ss_pred CCceEEEecccc-c------ccchhhhhchhhheeeEEECCCccEEEEeecc----cceeeeeCCCcc---hhhhhhhcc
Confidence 346788887654 1 12334444444433343 99999877754432 347788887775 222223222
Q ss_pred CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEE
Q psy4818 352 NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 352 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~ 412 (734)
..+++ +.+..+.+|+++.+.+ +.|.+|++.+.+....|+.....|..+.++|||.++.
T Consensus 410 ~~VYq-vawsaDsRLlVS~SkD--sTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 410 AAVYQ-VAWSADSRLLVSGSKD--STLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred ceeEE-EEeccCccEEEEcCCC--ceEEEEEeeeeeecccCCCCCceEEEEEecCCCceee
Confidence 33444 3444558999998877 6899999987777677776666788999999997664
No 130
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.09 E-value=5.1e-08 Score=100.86 Aligned_cols=212 Identities=17% Similarity=0.120 Sum_probs=117.9
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
..+.|+|||++++.+.... ..|+++|+.+++.+...........+.|+|||+.+++...+.
T Consensus 76 ~~~~~~~~g~~l~~~~~~~----~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~--------------- 136 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDD----NLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETT--------------- 136 (300)
T ss_pred cEEEECCCCCEEEEEcCCC----CeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCC---------------
Confidence 4678999999886654322 379999999876543222222236789999999888766421
Q ss_pred cEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCC-cccCCCCceeeecc-
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KISGKFPLKTVIPG- 302 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~l~~~- 302 (734)
..++.++..+.... ....... ....+.|+|||++|++... ....|++||+.++... .+.. ........
T Consensus 137 ~~~~~~d~~~~~~~--~~~~~~~---~~~~~~~s~dg~~l~~~~~---~~~~v~i~d~~~~~~~~~~~~--~~~~~~~~~ 206 (300)
T TIGR03866 137 NMAHFIDTKTYEIV--DNVLVDQ---RPRFAEFTADGKELWVSSE---IGGTVSVIDVATRKVIKKITF--EIPGVHPEA 206 (300)
T ss_pred CeEEEEeCCCCeEE--EEEEcCC---CccEEEECCCCCEEEEEcC---CCCEEEEEEcCcceeeeeeee--ccccccccc
Confidence 13555565543211 1111111 1235789999999876532 2257999999873210 0000 00000000
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~ 381 (734)
.....-.+++||+.+++.... ..+|.++|+++.+ ....+... . .+..+.+. +++.+++....+ ..|.+|
T Consensus 207 ~~~~~i~~s~dg~~~~~~~~~---~~~i~v~d~~~~~---~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~~~--~~i~v~ 276 (300)
T TIGR03866 207 VQPVGIKLTKDGKTAFVALGP---ANRVAVVDAKTYE---VLDYLLVG-Q-RVWQLAFTPDEKYLLTTNGVS--NDVSVI 276 (300)
T ss_pred CCccceEECCCCCEEEEEcCC---CCeEEEEECCCCc---EEEEEEeC-C-CcceEEECCCCCEEEEEcCCC--CeEEEE
Confidence 000111388999987664432 2358999987654 22222222 1 22334443 434454433223 579999
Q ss_pred ECCCCceeeeeCCC
Q psy4818 382 DLNTGKRLHSFPLD 395 (734)
Q Consensus 382 dl~~g~~~~~l~~~ 395 (734)
|+.+++.++.+...
T Consensus 277 d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 277 DVAALKVIKSIKVG 290 (300)
T ss_pred ECCCCcEEEEEEcc
Confidence 99988877777643
No 131
>KOG0266|consensus
Probab=99.07 E-value=2e-08 Score=109.74 Aligned_cols=232 Identities=16% Similarity=0.134 Sum_probs=143.0
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC-CCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV-DTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl-~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
++...+..+.|||||++|+= ++...+|++||+ +.+..+....+. ......+|+|+|+.|+-.+.|.
T Consensus 201 ~h~~~v~~~~fs~d~~~l~s-----~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~------- 268 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLLS-----GSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDG------- 268 (456)
T ss_pred ccccceeeeEECCCCcEEEE-----ecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCC-------
Confidence 45677899999999997773 345579999999 444544322222 2347899999997666666543
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.|++|++.++... ..+. .+...+..+++++||++|+-. .....|.+||+.++... ..
T Consensus 269 ---------tvriWd~~~~~~~--~~l~--~hs~~is~~~f~~d~~~l~s~----s~d~~i~vwd~~~~~~~------~~ 325 (456)
T KOG0266|consen 269 ---------TVRIWDVRTGECV--RKLK--GHSDGISGLAFSPDGNLLVSA----SYDGTIRVWDLETGSKL------CL 325 (456)
T ss_pred ---------cEEEEeccCCeEE--Eeee--ccCCceEEEEECCCCCEEEEc----CCCccEEEEECCCCcee------ee
Confidence 6899999885422 2222 334466789999999999843 22368999999984211 01
Q ss_pred eeeeccccc--eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCC-ceeEEEEEeeCCEEEEEEEe
Q psy4818 297 KTVIPGMDH--HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 297 ~~l~~~~~~--~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~ 372 (734)
..+...... .... |+|+|+.++..+. +..|..|++..+.. ......+... .-+.......++.++++...
T Consensus 326 ~~~~~~~~~~~~~~~~fsp~~~~ll~~~~----d~~~~~w~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~ 399 (456)
T KOG0266|consen 326 KLLSGAENSAPVTSVQFSPNGKYLLSASL----DRTLKLWDLRSGKS--VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSE 399 (456)
T ss_pred ecccCCCCCCceeEEEECCCCcEEEEecC----CCeEEEEEccCCcc--eeeecccCCcceeEecccccCCCCeEEEEeC
Confidence 112222222 2223 8999988776543 34588888876541 2333333322 11112222333566666666
Q ss_pred CCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEE
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFY 413 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~ 413 (734)
+ ..+++|++.++..+..+... ...+..+++++....+..
T Consensus 400 d--~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s 439 (456)
T KOG0266|consen 400 D--GSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIAS 439 (456)
T ss_pred C--ceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeee
Confidence 5 47999999888777777766 566666666666654443
No 132
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.07 E-value=1.2e-07 Score=96.65 Aligned_cols=231 Identities=15% Similarity=0.115 Sum_probs=122.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
.....|.+||++|.|.++..|. .++|++|+++++.++.|.+.. ...+..+||+++.|+|....
T Consensus 38 F~~~~ft~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-------------- 101 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-------------- 101 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT--------------
T ss_pred ecCCCcCCCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC--------------
Confidence 3467899999999999998766 789999999999877765432 22467899999999998742
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE--ecCCcEEEEEEecCCC------------------CceEEEEeC
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV--TDCGRYLLVSTSNNTQ------------------GSDLHYFDL 282 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~------------------~~~i~~~d~ 282 (734)
..|+.++|.|.. ...|++.+++ |.....| +.|++.++.......+ .+.|+.+|+
T Consensus 102 --~~l~~vdL~T~e--~~~vy~~p~~--~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 102 --RSLRRVDLDTLE--ERVVYEVPDD--WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp --TEEEEEETTT----EEEEEE--TT--EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred --CeEEEEECCcCc--EEEEEECCcc--cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 279999999874 4478887653 4443455 4678887655432111 158999999
Q ss_pred CCCCCCcccCCCCceeeecccc-ceEEEEEecCCeEEEEeCCC---CCCceEEEEecCCCCCCCceEeecCCCCceeEEE
Q psy4818 283 HSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKN---APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 358 (734)
Q Consensus 283 ~~~~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~ 358 (734)
.+|. ...+..... -++..+||....++..+.++ .-..+|+.++.++.. .+.+.+..+...+.--
T Consensus 176 ~tG~---------~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~---~~~v~~~~~~e~~gHE 243 (386)
T PF14583_consen 176 KTGE---------RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN---VKKVHRRMEGESVGHE 243 (386)
T ss_dssp TT-----------EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS------EESS---TTEEEEEE
T ss_pred CCCc---------eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc---ceeeecCCCCcccccc
Confidence 9842 333433222 23334777554444444332 224589999988765 3555544444443333
Q ss_pred E-EeeCCEEEEEEE-eCCc-eeEEEEECCCCceeeeeCCCCceEEeeccCcccce
Q psy4818 359 A-AVANNKLIVHYI-QNVR-SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNE 410 (734)
Q Consensus 359 ~-~~~~~~l~~~~~-~~~~-~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~ 410 (734)
+ .+++..|.+... ..+. ..|+.+|+.+++.......+. .+ .+..++|++-
T Consensus 244 fw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p~-~~-H~~ss~Dg~L 296 (386)
T PF14583_consen 244 FWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMPW-CS-HFMSSPDGKL 296 (386)
T ss_dssp EE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE-S-EE-EEEE-TTSSE
T ss_pred cccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCCc-ee-eeEEcCCCCE
Confidence 3 345566666444 4442 368888998887633333332 22 3445566543
No 133
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.07 E-value=6.9e-09 Score=100.69 Aligned_cols=116 Identities=12% Similarity=0.143 Sum_probs=86.7
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhH
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD 551 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D 551 (734)
.+..+++|.. .+.+|+||+.||-. ..+.+-..+.+.+++.||+|+.+++..-.. .....+.++
T Consensus 4 ~~l~v~~P~~---~g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~ 66 (259)
T PF12740_consen 4 KPLLVYYPSS---AGTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVAS 66 (259)
T ss_pred CCeEEEecCC---CCCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHH
Confidence 4678889987 58899999999864 223333345567788999999999654111 122345678
Q ss_pred HHHHHHHHHHc--C------CCCCCcEEEEEcChHHHHHHHHHhcC-----CCceeEEEEcCCcch
Q psy4818 552 FQAAAEYMINK--K------YTKPKYITIMGGSNGGLLVGACLNQR-----PELYGAALILVGALD 604 (734)
Q Consensus 552 ~~~~~~~l~~~--~------~~d~~ri~i~G~S~GG~~~~~~~~~~-----p~~~~a~v~~~~~~d 604 (734)
+...++||.+. . ..|-+||+|+|||.||-++..++.++ +.+|+++|+.-|+--
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 88889998763 1 25888999999999999999998876 458999999998763
No 134
>KOG1454|consensus
Probab=99.07 E-value=2e-09 Score=111.11 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=125.2
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
...|.||++||.-++ ...|...+-.+-...|+.|.++|..|.|-. .....+ ......+....++.+..+...
T Consensus 56 ~~~~pvlllHGF~~~--~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~--s~~~~~----~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGAS--SFSWRRVVPLLSKAKGLRVLAIDLPGHGYS--SPLPRG----PLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCC--cccHhhhccccccccceEEEEEecCCCCcC--CCCCCC----CceehhHHHHHHHHHHHhhcC
Confidence 467889999996443 334444332222223699999999994421 112211 125566777777666555333
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEE---EcCCcchhcccc--------c-------------cccC-cccccc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAAL---ILVGALDMLRFN--------K-------------FTIA-YYSESE 620 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v---~~~~~~d~~~~~--------~-------------~~~~-~~~~~~ 620 (734)
. ++.++|+|+||+++..+|+.+|+..+.+| ...+........ . .... ..|...
T Consensus 128 ~--~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 E--PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred c--ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 3 39999999999999999999999999988 444322111000 0 0000 001000
Q ss_pred --------cCCC-CCHHHHHHH------------------Hh-----CCccCCCCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 621 --------FGSP-NNKTHFHNL------------------LS-----YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 621 --------~g~~-~~~~~~~~~------------------~~-----~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
+.++ ...+....+ .. ..+...++.. .++| +||++|+.|..+|.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~p-vlii~G~~D~~~p~~ 281 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKI---WKCP-VLIIWGDKDQIVPLE 281 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccc---cCCc-eEEEEcCcCCccCHH
Confidence 0011 001110000 00 1111233431 3477 999999999999998
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 669 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 669 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.+..+.+.+. .+++.+.+++||.-.-... .+..+.+..|+..+.
T Consensus 282 ~~~~~~~~~p-----------n~~~~~I~~~gH~~h~e~P--e~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 282 LAEELKKKLP-----------NAELVEIPGAGHLPHLERP--EEVAALLRSFIARLR 325 (326)
T ss_pred HHHHHHhhCC-----------CceEEEeCCCCcccccCCH--HHHHHHHHHHHHHhc
Confidence 7766666552 3588999999998766443 466777889988753
No 135
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.06 E-value=4.2e-10 Score=125.22 Aligned_cols=131 Identities=18% Similarity=0.104 Sum_probs=92.7
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcC-eEEEEEecc-cCCCCCchhhhccccccCCCc
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN-GIYAIPNIR-GGGELGEDWHNAGRLLKKQNC 548 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~r-G~~~~g~~~~~~~~~~~~~~~ 548 (734)
-+...++.|......++.|+||++|||.......... ....++.+.+ ++|+.+||| |..+|...... ...+-..
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g 153 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYG 153 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchh
Confidence 5778888887654457889999999996443333221 1223444334 999999999 55555432211 1223345
Q ss_pred hhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCcchh
Q psy4818 549 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALDM 605 (734)
Q Consensus 549 ~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d~ 605 (734)
+.|++++++|+.++ --.||++|.|+|+|+||+++.+++.. .+.+|+++|+.+|....
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 78999999999775 13799999999999999999998875 34589999998886543
No 136
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.06 E-value=3.7e-10 Score=117.00 Aligned_cols=218 Identities=20% Similarity=0.189 Sum_probs=131.5
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCC---CCcCCccccHHHHHHHHhcC-eEEEEEecccCCCCCc-hhhhcc--ccc
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFN-GIYAIPNIRGGGELGE-DWHNAG--RLL 543 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~~l~~~G-~~v~~~~~rG~~~~g~-~~~~~~--~~~ 543 (734)
-+..-|+.|+ .+.++.||+||+|||. |+...+.|.. +.|+++| ++|+.+|||-|- +|- ++.... ...
T Consensus 79 CL~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg---s~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~ 152 (491)
T COG2272 79 CLYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDG---SALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAF 152 (491)
T ss_pred ceeEEeeccC--CCCCCCcEEEEEeccccccCCCcccccCh---HHHHhcCCEEEEEeCccccc-ceeeehhhccccccc
Confidence 4678888888 3456799999999983 3444555665 4466678 999999999754 331 222211 111
Q ss_pred cCCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEcCCcchhccccc--cccCc
Q psy4818 544 KKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALDMLRFNK--FTIAY 615 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~~~~~--~~~~~ 615 (734)
..-.-+.|++.+++|+.++ ---||+.|.|+|.|+|++.++.+++. |. +|+-+|+.+|-.-...... ...+.
T Consensus 153 ~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~~~~s~~~A~~~a~ 231 (491)
T COG2272 153 ASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAASRVTSREEAREKAA 231 (491)
T ss_pred cccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCCccCcHHHHHHHHH
Confidence 1124588999999999776 23699999999999999999999875 55 8888888877654222110 01112
Q ss_pred ccccccCCCCCHHHHHHHHhCCccCCCCCCCCC-ccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy4818 616 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN-TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 694 (734)
Q Consensus 616 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~-~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 694 (734)
.+...+|.+ .+..+.|...++..-++.-... ....-+....-.-|+.+-+....++.+.-+.. ++|+.+-
T Consensus 232 ~f~~~lG~~--~~~~~~L~~~~~~~L~~~~~~~~~~~~~~~~~~p~~~d~~lp~~P~e~~~~g~~~-------~vpl~iG 302 (491)
T COG2272 232 AFARALGIP--EATLDKLRALSAEDLVKARLPLIGRTFGAVPYGPVLGDSLLPRDPLEAIAQGRSH-------GVPLMIG 302 (491)
T ss_pred HHHHHhCCC--HHHHHHHhcCCHHHHHhhhhhhccccCCCcCCCCccCcccccCChhhhhhccccc-------CCcEEee
Confidence 233445766 3445555555553221110000 00000111122234446666777777766666 7888776
Q ss_pred EeCCCCCCCC
Q psy4818 695 VEQDAGHGQG 704 (734)
Q Consensus 695 ~~~~~gH~~~ 704 (734)
+.-++|-.|.
T Consensus 303 tn~dEg~~f~ 312 (491)
T COG2272 303 TNHDEGSLFI 312 (491)
T ss_pred ccCCcceEEe
Confidence 6666666553
No 137
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.02 E-value=8.2e-09 Score=128.31 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=125.8
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||..+... .|.. ....|.+ +|.|+++|+||.|.....-............++++.+.+..++++ ..
T Consensus 1370 ~~~~vVllHG~~~s~~--~w~~-~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~--l~ 1443 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE--DWIP-IMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH--IT 1443 (1655)
T ss_pred CCCeEEEECCCCCCHH--HHHH-HHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH--hC
Confidence 4578999999866654 3443 3355654 799999999996644211000000011123466666666555554 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc--c--ccc-----------cCc-ccccccCCC------
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--N--KFT-----------IAY-YSESEFGSP------ 624 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--~--~~~-----------~~~-~~~~~~g~~------ 624 (734)
.+++.++|||+||.+++.++.++|++++++|+..+...+... . ... .+. .+...|..+
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 1523 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSL 1523 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhh
Confidence 568999999999999999999999999988876643211100 0 000 000 000001000
Q ss_pred -CCHHH----------------HHHHHhCCcc------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q psy4818 625 -NNKTH----------------FHNLLSYSPL------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 681 (734)
Q Consensus 625 -~~~~~----------------~~~~~~~sp~------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~ 681 (734)
..+.. ...+...+.. ..+.. ++.| +|+++|++|..++ ..+.++.+.+.+..
T Consensus 1524 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~----I~~P-tLlI~Ge~D~~~~-~~a~~~~~~i~~a~ 1597 (1655)
T PLN02980 1524 RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQ----CDTP-LLLVVGEKDVKFK-QIAQKMYREIGKSK 1597 (1655)
T ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhh----CCCC-EEEEEECCCCccH-HHHHHHHHHccccc
Confidence 00000 0011111100 11222 6777 9999999998764 66777776665420
Q ss_pred CCCC-CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 682 GSLP-YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 682 ~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.... .....+++++++++||...-... .+....+..||.+.-
T Consensus 1598 ~~~~~~~~~~a~lvvI~~aGH~~~lE~P--e~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1598 ESGNDKGKEIIEIVEIPNCGHAVHLENP--LPVIRALRKFLTRLH 1640 (1655)
T ss_pred cccccccccceEEEEECCCCCchHHHCH--HHHHHHHHHHHHhcc
Confidence 0000 00112688999999998764433 356666788988754
No 138
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.02 E-value=2.8e-08 Score=100.28 Aligned_cols=232 Identities=11% Similarity=0.111 Sum_probs=147.5
Q ss_pred CcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEEC
Q psy4818 153 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 232 (734)
Q Consensus 153 G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l 232 (734)
|.+|.|++.. +||.+++.+|+.+..+.+-.-...+.+||||+.|+|++.-.. ++.....||.++.
T Consensus 50 GD~IiFt~~D------dlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~---------ss~~taDly~v~~ 114 (668)
T COG4946 50 GDRIIFTCCD------DLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLG---------SSLQTADLYVVPS 114 (668)
T ss_pred CcEEEEEech------HHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEec---------CCCccccEEEEeC
Confidence 8889998853 599999999987665543322367889999999999765321 1334457999999
Q ss_pred CCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC--ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEE
Q psy4818 233 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG--SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEII 310 (734)
Q Consensus 233 ~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~--~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~ 310 (734)
..++.+.+.-|.. .+..-+.|+|||+.|+.+.-..... ..+|.+..++... .+|- .......+
T Consensus 115 e~Ge~kRiTyfGr----~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~---------e~Ln--lGpathiv 179 (668)
T COG4946 115 EDGEAKRITYFGR----RFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKT---------EPLN--LGPATHIV 179 (668)
T ss_pred CCCcEEEEEEecc----ccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCcee---------eecc--CCceeeEE
Confidence 8888776665532 2334468999999998754332221 6788888877322 1221 12222334
Q ss_pred EecCCeEEEEeC----------CCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 311 ANNGPELIVKTT----------KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 311 s~dg~~l~~~s~----------~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
-.|| .+++-.| +++.+++|+.-.-.+.. ++.++.-. .++ ++..+.. +++||.+..+|..+||.
T Consensus 180 ~~dg-~ivigRntydLP~WK~YkGGtrGklWis~d~g~t---FeK~vdl~-~~v-S~PmIV~-~RvYFlsD~eG~GnlYS 252 (668)
T COG4946 180 IKDG-IIVIGRNTYDLPHWKGYKGGTRGKLWISSDGGKT---FEKFVDLD-GNV-SSPMIVG-ERVYFLSDHEGVGNLYS 252 (668)
T ss_pred EeCC-EEEEccCcccCcccccccCCccceEEEEecCCcc---eeeeeecC-CCc-CCceEEc-ceEEEEecccCccceEE
Confidence 4555 3444333 23556667654433323 34444333 333 3333444 79999999999999999
Q ss_pred EECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|+ +|+.+++-+.- +.. .-..+.||++++|+.. +.+|.||.
T Consensus 253 vdl-dGkDlrrHTnFtdYY--~R~~nsDGkrIvFq~~-----GdIylydP 294 (668)
T COG4946 253 VDL-DGKDLRRHTNFTDYY--PRNANSDGKRIVFQNA-----GDIYLYDP 294 (668)
T ss_pred ecc-CCchhhhcCCchhcc--ccccCCCCcEEEEecC-----CcEEEeCC
Confidence 999 78877665532 222 2334568888887654 47999999
No 139
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.01 E-value=1.8e-09 Score=115.16 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=107.8
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccc--cHHHHH---HHHhcCeEEEEEecccCC
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF--SISRCM---FLRHFNGIYAIPNIRGGG 530 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~--~~~~~~---~l~~~G~~v~~~~~rG~~ 530 (734)
.+..+.+.++-+||+++...||+|++ .++.|+++..+-.|-......+ +...+. +++.+||+|+..|.||.+
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 36778899999999999999999997 3889999988733221111111 111122 455679999999999977
Q ss_pred CCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc
Q psy4818 531 ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 607 (734)
Q Consensus 531 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 607 (734)
+....|... .. .+.+|-.++|+||.++.+.+ .+|+.+|.||+|+...++|+..|--.||++..++..|+.+
T Consensus 93 ~SeG~~~~~----~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 93 GSEGVFDPE----SS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred cCCccccee----cc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 654333321 11 37889999999999999977 5899999999999999999877666699999999888653
No 140
>KOG4409|consensus
Probab=99.01 E-value=8.3e-09 Score=102.12 Aligned_cols=128 Identities=14% Similarity=0.116 Sum_probs=81.1
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.+. ++.++...-+.+.. ...+.+|++||- |.... .|..++ .-|++ ...|.++|..| +|..-+
T Consensus 66 ~~~~v~i~--~~~~iw~~~~~~~~----~~~~plVliHGy-GAg~g-~f~~Nf-~~La~-~~~vyaiDllG---~G~SSR 132 (365)
T KOG4409|consen 66 SKKYVRIP--NGIEIWTITVSNES----ANKTPLVLIHGY-GAGLG-LFFRNF-DDLAK-IRNVYAIDLLG---FGRSSR 132 (365)
T ss_pred ceeeeecC--CCceeEEEeecccc----cCCCcEEEEecc-chhHH-HHHHhh-hhhhh-cCceEEecccC---CCCCCC
Confidence 34444443 55566555555543 344556777874 33322 233333 44565 89999999999 443322
Q ss_pred hccccccCCCchhHHHHHHH-HHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
..- ........+.++..++ |-++.+. +++.|+|||+|||++...|.++|+.++-.|+..|.
T Consensus 133 P~F-~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 133 PKF-SIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred CCC-CCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 221 1223334446666665 4444443 48999999999999999999999999999988774
No 141
>COG0627 Predicted esterase [General function prediction only]
Probab=99.01 E-value=4.8e-09 Score=106.32 Aligned_cols=228 Identities=18% Similarity=0.118 Sum_probs=141.9
Q ss_pred CCCCCcEEEEecCCCCCc-CCccccHHHHHHHHhcCeEEEEEecc--------------cC-CCCCchhhhccccccCCC
Q psy4818 484 RNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIR--------------GG-GELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 484 ~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~r--------------G~-~~~g~~~~~~~~~~~~~~ 547 (734)
.+.+.|++++.||--... .-..+. .+....+..|++++.+|.. |+ .+|=.+|........ ..
T Consensus 50 m~~~ipV~~~l~G~t~~~~~~~~~~-g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~ 127 (316)
T COG0627 50 MGRDIPVLYLLSGLTCNEPNVYLLD-GLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PY 127 (316)
T ss_pred cCCCCCEEEEeCCCCCCCCceEecc-chhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-cc
Confidence 356789999998864332 111112 2334556679999887433 31 223234444321111 35
Q ss_pred chhHHHHH-HH-HHHHcCCCCC--CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc-------cCcc
Q psy4818 548 CFDDFQAA-AE-YMINKKYTKP--KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-------IAYY 616 (734)
Q Consensus 548 ~~~D~~~~-~~-~l~~~~~~d~--~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-------~~~~ 616 (734)
.+++++.. +- .+.+...++. ++.+|.|+||||+-++.++.++|++|+.+.+.+|+++.......+ -+..
T Consensus 128 q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~ 207 (316)
T COG0627 128 QWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKA 207 (316)
T ss_pred chhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCcc
Confidence 56776653 33 3333444454 388999999999999999999999999999999999876433222 0111
Q ss_pred cccccCCCCCHHHHHHHHhCCccCCCCCCCCCc---------cCCcEEEEecCCCCCCC--ChHHHHHHHHHHhhhCCCC
Q psy4818 617 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT---------QYPATLVLTGDHDDRVP--PLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 617 ~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~---------~~P~~Li~~g~~D~~v~--~~~~~~~~~~L~~~~~~~~ 685 (734)
+...||...+. ..++++|..++.+..... .-|++++.+|..|.... ...+..+.+++++.
T Consensus 208 ~~~~~G~~~~~----~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~----- 278 (316)
T COG0627 208 FNAMLGPDSDP----AWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAA----- 278 (316)
T ss_pred HHHhcCCCccc----cccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhc-----
Confidence 22234544321 234566655554200001 33558889999887553 23378899999988
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 686 YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|.+..+...++..|...- .-......+.|+...|+..
T Consensus 279 --g~~~~~~~~~~G~Hsw~~----w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 279 --GIPNGVRDQPGGDHSWYF----WASQLADHLPWLAGALGLA 315 (316)
T ss_pred --CCCceeeeCCCCCcCHHH----HHHHHHHHHHHHHHHhccC
Confidence 889888888889997632 2455667889999988753
No 142
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.99 E-value=4.4e-07 Score=92.23 Aligned_cols=237 Identities=17% Similarity=0.167 Sum_probs=141.8
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..+.|+|||++|++... ...|++|++.+++...... .......+.|+|+++.|+....+.
T Consensus 9 ~~~i~~~~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---------- 73 (289)
T cd00200 9 TGGVTCVAFSPDGKLLATGSG-----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDK---------- 73 (289)
T ss_pred CCCEEEEEEcCCCCEEEEeec-----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCC----------
Confidence 345889999999999987653 2479999998876432221 122224789999998887766432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|+++++.+... +..+.. .......+.|+|+++.++... ....|++|++.++. ....+
T Consensus 74 ------~i~i~~~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~--------~~~~~ 131 (289)
T cd00200 74 ------TIRLWDLETGEC--VRTLTG--HTSYVSSVAFSPDGRILSSSS----RDKTIKVWDVETGK--------CLTTL 131 (289)
T ss_pred ------eEEEEEcCcccc--eEEEec--cCCcEEEEEEcCCCCEEEEec----CCCeEEEEECCCcE--------EEEEe
Confidence 688888876432 222222 222456789999988766432 23689999998621 11112
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC-EEEEEEEeCCcee
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNVRSV 377 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~ 377 (734)
.......... |+++++.++..+ . +..|..+|+.++.. ...+... ...+..+.+..++ .+++... + ..
T Consensus 132 ~~~~~~i~~~~~~~~~~~l~~~~-~---~~~i~i~d~~~~~~---~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-~--~~ 200 (289)
T cd00200 132 RGHTDWVNSVAFSPDGTFVASSS-Q---DGTIKLWDLRTGKC---VATLTGH-TGEVNSVAFSPDGEKLLSSSS-D--GT 200 (289)
T ss_pred ccCCCcEEEEEEcCcCCEEEEEc-C---CCcEEEEEcccccc---ceeEecC-ccccceEEECCCcCEEEEecC-C--Cc
Confidence 1122222222 788866555433 1 24588899875441 2222222 2234445454434 4544443 3 57
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+||+.+++.+..+......+..+.++++ +.+++..+ ....++.+|+
T Consensus 201 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~---~~~~i~i~~~ 248 (289)
T cd00200 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPD-GYLLASGS---EDGTIRVWDL 248 (289)
T ss_pred EEEEECCCCceecchhhcCCceEEEEEcCC-CcEEEEEc---CCCcEEEEEc
Confidence 999999777776666444456667778877 44555544 2347889998
No 143
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.98 E-value=1.5e-08 Score=95.11 Aligned_cols=180 Identities=17% Similarity=0.175 Sum_probs=104.8
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCe--EEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNG--IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+|+||--.+..+... ....+++++.|. .+.++|++- ..++.++.++.++++. .+
T Consensus 1 ~ilYlHGF~Ssp~S~Ka-~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~--~~ 58 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKA-QALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEEL--KP 58 (187)
T ss_pred CeEEecCCCCCCCCHHH-HHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhC--CC
Confidence 48999996443332211 123456666553 455555432 1345566666666653 33
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc----ccccccCCCCCHHHHHHHHhCCccCCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY----YSESEFGSPNNKTHFHNLLSYSPLHNIK 643 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~sp~~~~~ 643 (734)
+.++|+|.|+||+.+.+++.+++ .++ |+.+|.+........-++. .|...|.. ..+....++++.. ..+.
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~--~~~~~~~l~~l~~-~~~~ 132 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYEL--TEEHIEELKALEV-PYPT 132 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCcccee--chHhhhhcceEec-cccC
Confidence 45999999999999999998875 345 7888888766554433333 22222211 2222333333221 1122
Q ss_pred CCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 644 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 644 ~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
.| . ++|+++++.|..+++.++.+.++ .. ...+.+|.+|.|..- .+....+++|+
T Consensus 133 ~~-----~-~~lvll~~~DEvLd~~~a~~~~~---~~-----------~~~i~~ggdH~f~~f----~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NP-----E-RYLVLLQTGDEVLDYREAVAKYR---GC-----------AQIIEEGGDHSFQDF----EEYLPQIIAFL 186 (187)
T ss_pred CC-----c-cEEEEEecCCcccCHHHHHHHhc---Cc-----------eEEEEeCCCCCCccH----HHHHHHHHHhh
Confidence 21 1 39999999999999966544443 21 334668899999753 34455677776
No 144
>KOG0272|consensus
Probab=98.98 E-value=2.7e-08 Score=99.13 Aligned_cols=232 Identities=11% Similarity=0.064 Sum_probs=151.6
Q ss_pred CCcEEEeeEEeCCC--CcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 139 DGTTALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 139 ~~~~~~~~~~~SPD--G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
+++..++++.|+|. +..||-.+ ....+.+|++++...+.+.. ...+++.++|.|+|+.|.-.++|.
T Consensus 215 gH~~~v~~~~fhP~~~~~~lat~s-----~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~------ 283 (459)
T KOG0272|consen 215 GHTSRVGAAVFHPVDSDLNLATAS-----ADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDS------ 283 (459)
T ss_pred ccccceeeEEEccCCCccceeeec-----cCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeeccccc------
Confidence 45567899999998 55666433 33468999998877665433 334668899999999999888754
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.=.+|++.++.. ++.++. +..-+.+++|.|||..++ .++-.+--.+||+.+|. .
T Consensus 284 ----------tWRlWD~~tk~E---lL~QEG-Hs~~v~~iaf~~DGSL~~----tGGlD~~~RvWDlRtgr--------~ 337 (459)
T KOG0272|consen 284 ----------TWRLWDLETKSE---LLLQEG-HSKGVFSIAFQPDGSLAA----TGGLDSLGRVWDLRTGR--------C 337 (459)
T ss_pred ----------chhhcccccchh---hHhhcc-cccccceeEecCCCceee----ccCccchhheeecccCc--------E
Confidence 234567776642 444443 344567899999999876 22222444678998842 2
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 373 (734)
...+-.+....+.+ |||+|-.++-- +.+...-+||+..... .-++|.. ...+..+.+. ..+.++++...|
T Consensus 338 im~L~gH~k~I~~V~fsPNGy~lATg----s~Dnt~kVWDLR~r~~---ly~ipAH-~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 338 IMFLAGHIKEILSVAFSPNGYHLATG----SSDNTCKVWDLRMRSE---LYTIPAH-SNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred EEEecccccceeeEeECCCceEEeec----CCCCcEEEeeeccccc---ceecccc-cchhhheEecccCCeEEEEcccC
Confidence 23343444555665 99999777632 2344577888876541 3344443 3445555544 357778877766
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFL 419 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~ 419 (734)
..+.+|+..+...++.|....+-|.++..++|+..+ ..+++.
T Consensus 410 --~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i--~t~s~D 451 (459)
T KOG0272|consen 410 --NTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAI--ATSSFD 451 (459)
T ss_pred --cceeeecCCCcccchhhcCCccceEEEEeccCCceE--EEeccC
Confidence 467788877788888888888888888888887533 334444
No 145
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.98 E-value=6.3e-07 Score=91.09 Aligned_cols=224 Identities=14% Similarity=0.163 Sum_probs=135.9
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..+.|+|++++|+.... ...|++||+.+++.+.... .......+.|+|+++.|+....+
T Consensus 53 ~i~~~~~~~~~~~l~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------- 114 (289)
T cd00200 53 PVRDVAASADGTYLASGSS-----DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRD------------- 114 (289)
T ss_pred ceeEEEECCCCCEEEEEcC-----CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCC-------------
Confidence 3568999999988887653 2479999999876433221 22234678999997644443312
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
..|+++++.+... ...+. ........+.|+|++++|+... ....|++||+.++. ....+..
T Consensus 115 ---~~i~~~~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~----~~~~i~i~d~~~~~--------~~~~~~~ 175 (289)
T cd00200 115 ---KTIKVWDVETGKC--LTTLR--GHTDWVNSVAFSPDGTFVASSS----QDGTIKLWDLRTGK--------CVATLTG 175 (289)
T ss_pred ---CeEEEEECCCcEE--EEEec--cCCCcEEEEEEcCcCCEEEEEc----CCCcEEEEEccccc--------cceeEec
Confidence 2688888875431 12222 2233466789999988877532 22579999997621 1122222
Q ss_pred cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
....... .|+++++.+++.+. +..|..+|+.++. ....+... ...+..+.+..++.+++....+ ..+++
T Consensus 176 ~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~---~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~--~~i~i 245 (289)
T cd00200 176 HTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGK---CLGTLRGH-ENGVNSVAFSPDGYLLASGSED--GTIRV 245 (289)
T ss_pred CccccceEEECCCcCEEEEecC----CCcEEEEECCCCc---eecchhhc-CCceEEEEEcCCCcEEEEEcCC--CcEEE
Confidence 2212223 38899888877655 3458889987644 12222122 2244455555545666665534 47899
Q ss_pred EECCCCceeeeeCCCCceEEeeccCcccceEEE
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFY 413 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~ 413 (734)
|++.+++....+......+..+.+++++..++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 278 (289)
T cd00200 246 WDLRTGECVQTLSGHTNSVTSLAWSPDGKRLAS 278 (289)
T ss_pred EEcCCceeEEEccccCCcEEEEEECCCCCEEEE
Confidence 999777776777655556777888877655443
No 146
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.96 E-value=1.1e-08 Score=108.23 Aligned_cols=114 Identities=13% Similarity=0.018 Sum_probs=74.8
Q ss_pred CCCcEEEEecCCCCCcC----------CccccHHH---HHHHHhcCeEEEEEecccCCC--------CCchhhhcccc--
Q psy4818 486 RRNPVIIYGYGGYGVSV----------LPTFSISR---CMFLRHFNGIYAIPNIRGGGE--------LGEDWHNAGRL-- 542 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~----------~~~~~~~~---~~~l~~~G~~v~~~~~rG~~~--------~g~~~~~~~~~-- 542 (734)
.+.++||+.|+-.+.+. .++|-..+ ...++-.-|-|+++|+-|++. -|..-...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 34689999998655321 12222111 123555579999999998753 12111111111
Q ss_pred ---ccCCCchhHHHHHHHHHHHcCCCCCCcEE-EEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 543 ---LKKQNCFDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 543 ---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.....+++|+.+++..|+++- .-+++. ++|+|+||++++.++.++|++++.+|+.+.
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 123467899988888877653 335675 999999999999999999999998887754
No 147
>KOG0266|consensus
Probab=98.94 E-value=3.3e-07 Score=100.21 Aligned_cols=242 Identities=14% Similarity=0.169 Sum_probs=145.0
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC--ccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~--~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
..++....|||||+.++.+... ..+.++++.+++ .+... .....+..+.|||||+.|+-.+.|.
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~-----~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~-------- 225 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSD-----GLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDK-------- 225 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCC-----CcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCc--------
Confidence 3557779999999998876532 368888887666 33222 2222347899999999666555432
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
+|++|++.... ..+.....+..++..+.|+|+|+.|+ .. .....|++||+.++. ...
T Consensus 226 --------tiriwd~~~~~---~~~~~l~gH~~~v~~~~f~p~g~~i~-Sg---s~D~tvriWd~~~~~--------~~~ 282 (456)
T KOG0266|consen 226 --------TLRIWDLKDDG---RNLKTLKGHSTYVTSVAFSPDGNLLV-SG---SDDGTVRIWDVRTGE--------CVR 282 (456)
T ss_pred --------eEEEeeccCCC---eEEEEecCCCCceEEEEecCCCCEEE-Ee---cCCCcEEEEeccCCe--------EEE
Confidence 78889883221 12333335566788999999995554 33 333689999998832 233
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc-eeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR-TLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.+..+....... +++||..|+-.+ .++.|..||+.++... +...+...+.. .+..+.+..++..++....+
T Consensus 283 ~l~~hs~~is~~~f~~d~~~l~s~s----~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-- 355 (456)
T KOG0266|consen 283 KLKGHSDGISGLAFSPDGNLLVSAS----YDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-- 355 (456)
T ss_pred eeeccCCceEEEEECCCCCEEEEcC----CCccEEEEECCCCcee-eeecccCCCCCCceeEEEECCCCcEEEEecCC--
Confidence 344443433333 888888766432 2456999999876511 11223333233 45555554434444444444
Q ss_pred eeEEEEECCCCceeeeeCCC-Cc--eEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGKRLHSFPLD-LG--QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~-~g--~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+.+|++..++..+..... .+ .+.....++.+ .++++.+. ...++.+|+
T Consensus 356 ~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~sg~~---d~~v~~~~~ 408 (456)
T KOG0266|consen 356 RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGG-KLIYSGSE---DGSVYVWDS 408 (456)
T ss_pred CeEEEEEccCCcceeeecccCCcceeEecccccCCC-CeEEEEeC---CceEEEEeC
Confidence 47899999778776666544 22 23233334444 34333332 246888888
No 148
>PRK05855 short chain dehydrogenase; Validated
Probab=98.94 E-value=1e-08 Score=117.09 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=66.4
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccC
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 545 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~ 545 (734)
..||.+|....+-+ ...|+||++||..+... .|.. +...|. .||.|+++|+||.|.... . ....
T Consensus 9 ~~~g~~l~~~~~g~------~~~~~ivllHG~~~~~~--~w~~-~~~~L~-~~~~Vi~~D~~G~G~S~~---~---~~~~ 72 (582)
T PRK05855 9 SSDGVRLAVYEWGD------PDRPTVVLVHGYPDNHE--VWDG-VAPLLA-DRFRVVAYDVRGAGRSSA---P---KRTA 72 (582)
T ss_pred eeCCEEEEEEEcCC------CCCCeEEEEcCCCchHH--HHHH-HHHHhh-cceEEEEecCCCCCCCCC---C---Cccc
Confidence 45787776654321 23689999999865543 3443 345565 599999999999554321 1 1112
Q ss_pred CCchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhc
Q psy4818 546 QNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~ 588 (734)
..+++++...+..+++. ....+ +.|+|||+||.+++.++.+
T Consensus 73 ~~~~~~~a~dl~~~i~~--l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 73 AYTLARLADDFAAVIDA--VSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccCHHHHHHHHHHHHHH--hCCCCcEEEEecChHHHHHHHHHhC
Confidence 23455665555555543 12234 9999999999998877665
No 149
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.91 E-value=1.7e-06 Score=94.18 Aligned_cols=260 Identities=17% Similarity=0.166 Sum_probs=157.4
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCc------eE
Q psy4818 95 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD------WN 168 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~------~~ 168 (734)
.++|+|.+++|....+|.+...|++++..+| +.+-|. +. ....+++.|++||+.+.|........ ..
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d~--i~---~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETG--KFLPDG--IE---NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTT--EEEEEE--EE---EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCC--cCcCCc--cc---ccccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 3458999999999998899999999998666 333321 10 01122499999999999998766544 68
Q ss_pred EEEEEECCCCCcc-----cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCC---CCCCe
Q psy4818 169 TLHIKDVDTGKDY-----PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE---QDKDI 240 (734)
Q Consensus 169 ~l~v~dl~~g~~~-----~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~---~~~~~ 240 (734)
+||.+.+.++..- ........+..+.+|+||++|+....... . ...+|+.++... ...-.
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~-----------~-~s~v~~~d~~~~~~~~~~~~ 270 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGT-----------S-ESEVYLLDLDDGGSPDAKPK 270 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSS-----------S-EEEEEEEECCCTTTSS-SEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccc-----------c-CCeEEEEeccccCCCcCCcE
Confidence 9999999887532 11111111347889999999888776331 1 368999999875 22333
Q ss_pred eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce-eeeccccc-eEEEEEecCCeEE
Q psy4818 241 PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGMDH-HHEIIANNGPELI 318 (734)
Q Consensus 241 ~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-~l~~~~~~-~~~~~s~dg~~l~ 318 (734)
++....... ...+... |..+++.++.+.....|+.+++++.. ...+. .++..... ....++..+++|+
T Consensus 271 ~l~~~~~~~--~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~------~~~~~~~l~~~~~~~~l~~~~~~~~~Lv 340 (414)
T PF02897_consen 271 LLSPREDGV--EYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPS------PAEWWTVLIPEDEDVSLEDVSLFKDYLV 340 (414)
T ss_dssp EEEESSSS---EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTS------GGGEEEEEE--SSSEEEEEEEEETTEEE
T ss_pred EEeCCCCce--EEEEEcc--CCEEEEeeCCCCCCcEEEEecccccc------cccceeEEcCCCCceeEEEEEEECCEEE
Confidence 444432222 2222222 66677777665555899999998821 11234 34433332 2334778888888
Q ss_pred EEeCCCCCCceEEEEecC-CCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCC-ceeEEEEECCCCce
Q psy4818 319 VKTTKNAPKGKVVTINLN-NPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNV-RSVMDLHDLNTGKR 388 (734)
Q Consensus 319 ~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~l~~~dl~~g~~ 388 (734)
+....++ ..+|.++++. +.. ...+.... ...+..... .+.+.+.+..+.-. .+.+|.+|+++|+.
T Consensus 341 l~~~~~~-~~~l~v~~~~~~~~---~~~~~~p~-~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 341 LSYRENG-SSRLRVYDLDDGKE---SREIPLPE-AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp EEEEETT-EEEEEEEETT-TEE---EEEEESSS-SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred EEEEECC-ccEEEEEECCCCcE---EeeecCCc-ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 8777654 6689999998 433 12222222 233333321 23366777766544 45899999988875
No 150
>KOG0272|consensus
Probab=98.91 E-value=2.7e-08 Score=99.11 Aligned_cols=231 Identities=12% Similarity=0.068 Sum_probs=141.1
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcC--CcEEEEEEEecCCCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHD--HKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpD--g~~l~y~~~~~~~~~~~~~ 217 (734)
.-.+....||+|++.||-.+- + ..+.||...++..+....+.. ....+.|+|. +..++-.+.|.
T Consensus 175 ~rPis~~~fS~ds~~laT~sw-s----G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg-------- 241 (459)
T KOG0272|consen 175 TRPISGCSFSRDSKHLATGSW-S----GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADG-------- 241 (459)
T ss_pred CCcceeeEeecCCCeEEEeec-C----CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCC--------
Confidence 445788999999999995442 2 468899988886444333322 4578999998 45676666543
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.+.+|++.+.. ++-+...+..-+..++|.|+|++|+-.. ......+||+.++. . ..
T Consensus 242 --------tvklw~~~~e~----~l~~l~gH~~RVs~VafHPsG~~L~Tas----fD~tWRlWD~~tk~-E-------lL 297 (459)
T KOG0272|consen 242 --------TVKLWKLSQET----PLQDLEGHLARVSRVAFHPSGKFLGTAS----FDSTWRLWDLETKS-E-------LL 297 (459)
T ss_pred --------ceeeeccCCCc----chhhhhcchhhheeeeecCCCceeeecc----cccchhhcccccch-h-------hH
Confidence 46666665532 1222223334566799999999998433 23566789999831 1 11
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
..-.+....+.. |.+||..+. .. +.+.-=.+||+.++. ...++.+. -..+-.+.|..+++.+++.+.| .
T Consensus 298 ~QEGHs~~v~~iaf~~DGSL~~-tG---GlD~~~RvWDlRtgr---~im~L~gH-~k~I~~V~fsPNGy~lATgs~D--n 367 (459)
T KOG0272|consen 298 LQEGHSKGVFSIAFQPDGSLAA-TG---GLDSLGRVWDLRTGR---CIMFLAGH-IKEILSVAFSPNGYHLATGSSD--N 367 (459)
T ss_pred hhcccccccceeEecCCCceee-cc---CccchhheeecccCc---EEEEeccc-ccceeeEeECCCceEEeecCCC--C
Confidence 111222233333 889988544 22 222223458988876 23344443 3334456666668888777666 5
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
...+|||.-.+.+-.|+.....|+.+.++|..+.++++.+-.
T Consensus 368 t~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 368 TCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred cEEEeeecccccceecccccchhhheEecccCCeEEEEcccC
Confidence 788999964445556665555677788888666676665433
No 151
>KOG0279|consensus
Probab=98.90 E-value=3.3e-06 Score=80.27 Aligned_cols=239 Identities=12% Similarity=0.089 Sum_probs=149.6
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC-----CCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-----GKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~-----g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
++.-+...+..+++.-+.++.++. ..+.+|++.. |.++....+.. .+...+-|+||...+-.+.|.
T Consensus 14 h~d~Vt~la~~~~~~~~l~sasrD----k~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~---- 85 (315)
T KOG0279|consen 14 HTDWVTALAIKIKNSDILVSASRD----KTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG---- 85 (315)
T ss_pred CCceEEEEEeecCCCceEEEcccc----eEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc----
Confidence 445577888888888888877654 5788888764 33333222222 346788999997555444332
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.+++|++.+++.. ..|.. +...+.++++|||.++|+ .+...+.|.+|+.-+.
T Consensus 86 ------------~lrlWDl~~g~~t--~~f~G--H~~dVlsva~s~dn~qiv----SGSrDkTiklwnt~g~-------- 137 (315)
T KOG0279|consen 86 ------------TLRLWDLATGEST--RRFVG--HTKDVLSVAFSTDNRQIV----SGSRDKTIKLWNTLGV-------- 137 (315)
T ss_pred ------------eEEEEEecCCcEE--EEEEe--cCCceEEEEecCCCceee----cCCCcceeeeeeeccc--------
Confidence 7999999988543 34443 233567899999999987 3333478889988761
Q ss_pred CCceeeeccccce--EEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEE
Q psy4818 294 FPLKTVIPGMDHH--HEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 370 (734)
Q Consensus 294 ~~~~~l~~~~~~~--~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 370 (734)
..-.+..+...+ ..+ |+|+....++++.. .+..|-+||+++-+ ...-..+. ...+..+.+..++.+..+.
T Consensus 138 -ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s--~DktvKvWnl~~~~---l~~~~~gh-~~~v~t~~vSpDGslcasG 210 (315)
T KOG0279|consen 138 -CKYTIHEDSHREWVSCVRFSPNESNPIIVSAS--WDKTVKVWNLRNCQ---LRTTFIGH-SGYVNTVTVSPDGSLCASG 210 (315)
T ss_pred -EEEEEecCCCcCcEEEEEEcCCCCCcEEEEcc--CCceEEEEccCCcc---hhhccccc-cccEEEEEECCCCCEEecC
Confidence 111222222122 223 99997666666542 34558889998754 23333333 3455666666657888776
Q ss_pred EeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 371 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 371 ~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++ .++++||++.++.+..+.. ...|.+++++|.. +++.... -..+-++|+
T Consensus 211 gkd--g~~~LwdL~~~k~lysl~a-~~~v~sl~fspnr--ywL~~at---~~sIkIwdl 261 (315)
T KOG0279|consen 211 GKD--GEAMLWDLNEGKNLYSLEA-FDIVNSLCFSPNR--YWLCAAT---ATSIKIWDL 261 (315)
T ss_pred CCC--ceEEEEEccCCceeEeccC-CCeEeeEEecCCc--eeEeecc---CCceEEEec
Confidence 555 4899999988887666643 3456678888764 3332221 224778888
No 152
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.89 E-value=1.9e-08 Score=105.88 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=62.8
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc----------------cccC---
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR----------------LLKK--- 545 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~----------------~~~~--- 545 (734)
.++.|+|||.||..+.+.. |+..+ .-||++||+|++++.|-+.....-...... ....
T Consensus 97 ~~~~PvvIFSHGlgg~R~~--yS~~~-~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 97 PGKFPVVIFSHGLGGSRTS--YSAIC-GELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp SS-EEEEEEE--TT--TTT--THHHH-HHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCCCCEEEEeCCCCcchhh--HHHHH-HHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 3789999999998766553 45444 456778999999999965432211100000 0000
Q ss_pred -C-----------CchhHHHHHHHHHHH--c------------------CCCCCCcEEEEEcChHHHHHHHHHhcCCCce
Q psy4818 546 -Q-----------NCFDDFQAAAEYMIN--K------------------KYTKPKYITIMGGSNGGLLVGACLNQRPELY 593 (734)
Q Consensus 546 -~-----------~~~~D~~~~~~~l~~--~------------------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~ 593 (734)
. .-..|+..+++.|.+ . +.+|.++|+++|||.||..++.++.+. ..|
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCc
Confidence 0 013556666666643 1 346788999999999999999998876 578
Q ss_pred eEEEEcCCc
Q psy4818 594 GAALILVGA 602 (734)
Q Consensus 594 ~a~v~~~~~ 602 (734)
+++|+.-|.
T Consensus 253 ~~~I~LD~W 261 (379)
T PF03403_consen 253 KAGILLDPW 261 (379)
T ss_dssp -EEEEES--
T ss_pred ceEEEeCCc
Confidence 999866553
No 153
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.87 E-value=4.1e-08 Score=106.99 Aligned_cols=124 Identities=14% Similarity=0.030 Sum_probs=76.0
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc--HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCch
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS--ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 549 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~ 549 (734)
+..+-|.|... ....+.||++||........... ..+..+|.++||.|+++|.||.|.....+ .......
T Consensus 174 ~eLi~Y~P~t~--~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~------~~ddY~~ 245 (532)
T TIGR01838 174 FQLIQYEPTTE--TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK------TFDDYIR 245 (532)
T ss_pred EEEEEeCCCCC--cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC------ChhhhHH
Confidence 44555555431 12345567778864333222111 23567777789999999999955432211 1112334
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHH----HHhcC-CCceeEEEEcCCcchh
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA----CLNQR-PELYGAALILVGALDM 605 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~----~~~~~-p~~~~a~v~~~~~~d~ 605 (734)
+++.++++++.+. +..+++.++|+|+||.+++. ++... |+++++++..+..+|+
T Consensus 246 ~~i~~al~~v~~~--~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 246 DGVIAALEVVEAI--TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred HHHHHHHHHHHHh--cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 5677888888754 46678999999999998632 34444 7778888877665554
No 154
>KOG0315|consensus
Probab=98.86 E-value=2.7e-06 Score=79.42 Aligned_cols=229 Identities=14% Similarity=0.138 Sum_probs=136.3
Q ss_pred EEEeCCCCcCC-------CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCc
Q psy4818 128 EVFLDPNKLSK-------DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHK 200 (734)
Q Consensus 128 ~~l~d~~~~~~-------~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~ 200 (734)
..|+|.+.-.+ +++..+..+.|--||++++ .|+|..+++|||+..-...+.-.....+..+.-.|.-.
T Consensus 63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMy-----TgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQt 137 (311)
T KOG0315|consen 63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMY-----TGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQT 137 (311)
T ss_pred eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEE-----ecCCCceEEEEeccCcccchhccCCCCcceEEecCCcc
Confidence 34566654433 1234577899999999987 46677899999998743322222223335677778766
Q ss_pred EEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEE
Q psy4818 201 GFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYF 280 (734)
Q Consensus 201 ~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~ 280 (734)
.|+.... ...|++|++++..-...++ |++...+.++...|||++++-..+ ....|+|
T Consensus 138 eLis~dq----------------sg~irvWDl~~~~c~~~li---Pe~~~~i~sl~v~~dgsml~a~nn----kG~cyvW 194 (311)
T KOG0315|consen 138 ELISGDQ----------------SGNIRVWDLGENSCTHELI---PEDDTSIQSLTVMPDGSMLAAANN----KGNCYVW 194 (311)
T ss_pred eEEeecC----------------CCcEEEEEccCCccccccC---CCCCcceeeEEEcCCCcEEEEecC----CccEEEE
Confidence 6654432 2269999999764333332 333456778999999999985432 3578999
Q ss_pred eCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEE
Q psy4818 281 DLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 359 (734)
Q Consensus 281 d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 359 (734)
++-+.. ..++-.|..++-........ .+|||+++|+-.+.+ ..++.++.++- ......+....+.+-.-.+
T Consensus 195 ~l~~~~--~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd----ktv~iwn~~~~--~kle~~l~gh~rWvWdc~F 266 (311)
T KOG0315|consen 195 RLLNHQ--TASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD----KTVKIWNTDDF--FKLELVLTGHQRWVWDCAF 266 (311)
T ss_pred EccCCC--ccccceEhhheecccceEEEEEECCCCcEEEeecCC----ceEEEEecCCc--eeeEEEeecCCceEEeeee
Confidence 987621 11111222222222222333 399999988755443 35777777653 1123344444333333333
Q ss_pred EeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC
Q psy4818 360 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 395 (734)
Q Consensus 360 ~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~ 395 (734)
..+ +..+|+...+ ....+|++..|+.++.-...
T Consensus 267 S~d-g~YlvTassd--~~~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 267 SAD-GEYLVTASSD--HTARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred ccC-ccEEEecCCC--CceeecccccCceeeecCCc
Confidence 334 6666666665 56778899889877666543
No 155
>PTZ00421 coronin; Provisional
Probab=98.85 E-value=8.1e-07 Score=97.00 Aligned_cols=211 Identities=9% Similarity=-0.008 Sum_probs=118.2
Q ss_pred CcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCc-------ccc-cccccccCeeEEEcCCcEEEEEEEecC
Q psy4818 140 GTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKD-------YPE-VLKNVKFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 140 ~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~-------~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
+...+..+.||| |+++||-+.. ...|++||+.++.. +.. ......+..+.|+|++..++.+...
T Consensus 74 H~~~V~~v~fsP~d~~~LaSgS~-----DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~-- 146 (493)
T PTZ00421 74 QEGPIIDVAFNPFDPQKLFTASE-----DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA-- 146 (493)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeC-----CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC--
Confidence 345688999999 8888875543 35799999976531 111 1111234678999997655554432
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
...|.+|++.++.. +..+. .+...+..+.|+|||+.|+... ....|.+||+.++.
T Consensus 147 -------------DgtVrIWDl~tg~~--~~~l~--~h~~~V~sla~spdG~lLatgs----~Dg~IrIwD~rsg~---- 201 (493)
T PTZ00421 147 -------------DMVVNVWDVERGKA--VEVIK--CHSDQITSLEWNLDGSLLCTTS----KDKKLNIIDPRDGT---- 201 (493)
T ss_pred -------------CCEEEEEECCCCeE--EEEEc--CCCCceEEEEEECCCCEEEEec----CCCEEEEEECCCCc----
Confidence 12689999987642 22222 2333567899999999887432 23689999998731
Q ss_pred cCCCCceeeeccccce--EEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEE
Q psy4818 291 SGKFPLKTVIPGMDHH--HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIV 368 (734)
Q Consensus 291 ~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 368 (734)
....+....... ...|.+++..++........+..|.+||+.+... ............+....+..+..+++
T Consensus 202 ----~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~--p~~~~~~d~~~~~~~~~~d~d~~~L~ 275 (493)
T PTZ00421 202 ----IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS--PYSTVDLDQSSALFIPFFDEDTNLLY 275 (493)
T ss_pred ----EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC--ceeEeccCCCCceEEEEEcCCCCEEE
Confidence 122222221111 2248888776654443323345699999875431 11122111111222222222244444
Q ss_pred EEEeCCceeEEEEECCCCcee
Q psy4818 369 HYIQNVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 369 ~~~~~~~~~l~~~dl~~g~~~ 389 (734)
.... +...|++|++.+++..
T Consensus 276 lggk-gDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 276 IGSK-GEGNIRCFELMNERLT 295 (493)
T ss_pred EEEe-CCCeEEEEEeeCCceE
Confidence 4332 2357999999777643
No 156
>KOG0286|consensus
Probab=98.85 E-value=1.6e-06 Score=82.75 Aligned_cols=244 Identities=11% Similarity=0.083 Sum_probs=146.3
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
++...+..+.||+|.|+|+=++ .. ..|-|||.-|..... .+.....+-.-++||.|+.|+-...+.
T Consensus 53 GH~~Ki~~~~ws~Dsr~ivSaS-qD----GklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN-------- 119 (343)
T KOG0286|consen 53 GHLNKIYAMDWSTDSRRIVSAS-QD----GKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN-------- 119 (343)
T ss_pred ccccceeeeEecCCcCeEEeec-cC----CeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc--------
Confidence 3345588999999999987443 33 359999987654322 233333446789999999888766543
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
...||...............+.+.+.+|.....|.+|+..|- + ......-+||+++|. ..
T Consensus 120 ------~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT--~---SGD~TCalWDie~g~---------~~ 179 (343)
T KOG0286|consen 120 ------KCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILT--G---SGDMTCALWDIETGQ---------QT 179 (343)
T ss_pred ------eeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEe--c---CCCceEEEEEcccce---------EE
Confidence 235555443211211122223345666877788888776543 1 233688999999841 12
Q ss_pred eeeccccceEE-E-EEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC
Q psy4818 298 TVIPGMDHHHE-I-IAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 298 ~l~~~~~~~~~-~-~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
..+.+...+.. . ++| +++.++ . .+-+..-++||+..+. ...-++..+ .-+..+.+++++.-+++.++++
T Consensus 180 ~~f~GH~gDV~slsl~p~~~ntFv-S---g~cD~~aklWD~R~~~---c~qtF~ghe-sDINsv~ffP~G~afatGSDD~ 251 (343)
T KOG0286|consen 180 QVFHGHTGDVMSLSLSPSDGNTFV-S---GGCDKSAKLWDVRSGQ---CVQTFEGHE-SDINSVRFFPSGDAFATGSDDA 251 (343)
T ss_pred EEecCCcccEEEEecCCCCCCeEE-e---cccccceeeeeccCcc---eeEeecccc-cccceEEEccCCCeeeecCCCc
Confidence 23333333333 2 777 666554 2 2223447788987765 455555553 3445666665566677777775
Q ss_pred ceeEEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+||+....++.....+ ...|.++.++..|+-++.-|..++ ..++|.
T Consensus 252 --tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~----c~vWDt 302 (343)
T KOG0286|consen 252 --TCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFT----CNVWDT 302 (343)
T ss_pred --eeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCc----eeEeec
Confidence 4556688666665555433 445667777777765655566654 778886
No 157
>KOG0305|consensus
Probab=98.85 E-value=1.1e-06 Score=92.79 Aligned_cols=250 Identities=14% Similarity=0.087 Sum_probs=153.9
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc--ccccCeeE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSIS 194 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~--~~~~~~~~ 194 (734)
+|+-+...+....|.+.+ ...+..+.|||+|++||..... ..+.+||++..+.++.... ..+++.++
T Consensus 199 vylW~~~s~~v~~l~~~~------~~~vtSv~ws~~G~~LavG~~~-----g~v~iwD~~~~k~~~~~~~~h~~rvg~la 267 (484)
T KOG0305|consen 199 VYLWSASSGSVTELCSFG------EELVTSVKWSPDGSHLAVGTSD-----GTVQIWDVKEQKKTRTLRGSHASRVGSLA 267 (484)
T ss_pred EEEEecCCCceEEeEecC------CCceEEEEECCCCCEEEEeecC-----CeEEEEehhhccccccccCCcCceeEEEe
Confidence 444444445555666654 2447899999999999987642 4799999988775543332 44568899
Q ss_pred EEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC
Q psy4818 195 WTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG 274 (734)
Q Consensus 195 wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 274 (734)
|. +. ++-+.. +...|..+++...+..-. . ...+..-+.++.|++||++++ ++...
T Consensus 268 W~--~~-~lssGs---------------r~~~I~~~dvR~~~~~~~-~--~~~H~qeVCgLkws~d~~~lA----SGgnD 322 (484)
T KOG0305|consen 268 WN--SS-VLSSGS---------------RDGKILNHDVRISQHVVS-T--LQGHRQEVCGLKWSPDGNQLA----SGGND 322 (484)
T ss_pred cc--Cc-eEEEec---------------CCCcEEEEEEecchhhhh-h--hhcccceeeeeEECCCCCeec----cCCCc
Confidence 96 32 332222 122466666655432111 1 122344567899999999998 44555
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
+.+++||..+ ..+...+..+...... .|+|.-+-|+.... +..+..|..+|..++.. +..+ ....
T Consensus 323 N~~~Iwd~~~--------~~p~~~~~~H~aAVKA~awcP~q~~lLAsGG-Gs~D~~i~fwn~~~g~~--i~~v---dtgs 388 (484)
T KOG0305|consen 323 NVVFIWDGLS--------PEPKFTFTEHTAAVKALAWCPWQSGLLATGG-GSADRCIKFWNTNTGAR--IDSV---DTGS 388 (484)
T ss_pred cceEeccCCC--------ccccEEEeccceeeeEeeeCCCccCceEEcC-CCcccEEEEEEcCCCcE--eccc---ccCC
Confidence 8999999955 1233444444333333 38888776665543 34466799999887651 1111 2245
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEe
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~s 416 (734)
.+..+.|.....-+++.-.....+|.+|+..+-+.+..+..+...|..++.+||+..++....
T Consensus 389 QVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~ 451 (484)
T KOG0305|consen 389 QVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAA 451 (484)
T ss_pred ceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecc
Confidence 567777765333333333334468888888776666677777666778899999877665443
No 158
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.84 E-value=4.4e-06 Score=86.08 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=125.8
Q ss_pred EeCCCCcEEEEEEe-----CCCCceEEEEEEECCCCCccccccc--------ccccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 148 AFSDNGKHFAYCLS-----KSGSDWNTLHIKDVDTGKDYPEVLK--------NVKFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 148 ~~SPDG~~la~~~~-----~~g~~~~~l~v~dl~~g~~~~~~~~--------~~~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
.+||||+.|+.+.. ..|.+...|-|+|+++++.+.+..- ......++.|||||+||....+.
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p----- 126 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP----- 126 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC-----
Confidence 49999999887765 1344445799999999986532221 11224789999999888765331
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeE-----EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG-----LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 289 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~-----~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 289 (734)
...|-++++.+...- .-...++....+ .....+.||+.+.+.....+. ... .+
T Consensus 127 ---------~~~V~VvD~~~~kvv--~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~---~~----- 184 (352)
T TIGR02658 127 ---------SPAVGVVDLEGKAFV--RMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKI---KP----- 184 (352)
T ss_pred ---------CCEEEEEECCCCcEE--EEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEE---ee-----
Confidence 225777777665311 001111111000 011234555555443322111 110 00
Q ss_pred ccCCCCceeeecc-ccc--eEEEEEe-cCCeEEEEeCCCCCCceEEEEecCCCCC---CCceEeecCCC--C---ceeEE
Q psy4818 290 ISGKFPLKTVIPG-MDH--HHEIIAN-NGPELIVKTTKNAPKGKVVTINLNNPCE---KNWKTLIPEDE--N---RTLDV 357 (734)
Q Consensus 290 l~~~~~~~~l~~~-~~~--~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~---~~~~~l~~~~~--~---~~~~~ 357 (734)
..++.. ... ..+.+++ || +.+|+++. +.|+.+|+.+.+. ..|..+..... . .-.+.
T Consensus 185 -------~~vf~~~~~~v~~rP~~~~~dg-~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ 252 (352)
T TIGR02658 185 -------TEVFHPEDEYLINHPAYSNKSG-RLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQ 252 (352)
T ss_pred -------eeeecCCccccccCCceEcCCC-cEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCccee
Confidence 011111 000 0012456 55 56666765 5699999755321 11222221110 1 11223
Q ss_pred EEEe-eCCEEEEEEEe-------CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 358 VAAV-ANNKLIVHYIQ-------NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 358 ~~~~-~~~~l~~~~~~-------~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+. +++++|+.... ++..+|.++|.++++.+..|..... ..++.+++|++-+++..+.. ...+..+|+
T Consensus 253 ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~-~~~iavS~Dgkp~lyvtn~~--s~~VsViD~ 329 (352)
T TIGR02658 253 VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHE-IDSINVSQDAKPLLYALSTG--DKTLYIFDA 329 (352)
T ss_pred EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCc-eeeEEECCCCCeEEEEeCCC--CCcEEEEEC
Confidence 4444 44667764422 2225899999999998888875533 44778889998344443322 346899998
No 159
>KOG2624|consensus
Probab=98.81 E-value=1.2e-07 Score=98.82 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=107.5
Q ss_pred CCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc---HHHHHHHHhcCeEEEEEeccc
Q psy4818 452 FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRG 528 (734)
Q Consensus 452 ~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG 528 (734)
+...+|.+|...+++.||. |-..--.|... ++.|+|++.||-..++..+--+ ...+-.|+.+||-|..-|.||
T Consensus 41 i~~~gy~~E~h~V~T~DgY-iL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGY-ILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHHcCCceEEEEEEccCCe-EEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 4456788999999999997 44444445442 7899999999987776654332 224556788899999999999
Q ss_pred CCCCCchhhhcccc--------ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEE
Q psy4818 529 GGELGEDWHNAGRL--------LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAAL 597 (734)
Q Consensus 529 ~~~~g~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v 597 (734)
..|++.-...... .+..-...|+-+.++++.+. +..+++..+|||.|+.....++..+|+ .++.++
T Consensus 117 -n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 117 -NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred -cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 5566442221110 12233457999999999875 677899999999999999999998887 578888
Q ss_pred EcCCcchh
Q psy4818 598 ILVGALDM 605 (734)
Q Consensus 598 ~~~~~~d~ 605 (734)
+.+|++-+
T Consensus 194 aLAP~~~~ 201 (403)
T KOG2624|consen 194 ALAPAAFP 201 (403)
T ss_pred eecchhhh
Confidence 88887633
No 160
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.81 E-value=6.3e-08 Score=95.87 Aligned_cols=217 Identities=16% Similarity=0.107 Sum_probs=82.9
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEeccc-CCCCCchhhhccccccCCCchhHHHHHHHHHHHcC--
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG-GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK-- 563 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG-~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-- 563 (734)
+.-+||++-|-...-..-.|....+..|...||.|+.+..+- -++||.. .-.++.+|+.++++||....
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhcc
Confidence 344788886644434444455667777876799999999986 3456622 12346899999999998873
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCC-----CceeEEEEcCCcchhccccccc-------------------------c
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRP-----ELYGAALILVGALDMLRFNKFT-------------------------I 613 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p-----~~~~a~v~~~~~~d~~~~~~~~-------------------------~ 613 (734)
.-..++|+|+|||-|.--++.++.... ....++|+++|+.|-....... +
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 236789999999999999999987542 4689999999998754322110 0
Q ss_pred Ccccccc--cCCCCCHHHHHHHHhCCcc----------------CCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHH
Q psy4818 614 AYYSESE--FGSPNNKTHFHNLLSYSPL----------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFI 674 (734)
Q Consensus 614 ~~~~~~~--~g~~~~~~~~~~~~~~sp~----------------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~ 674 (734)
+..+... |+.|-.+. .++.-.+|- .... .+..| +|++.+.+|.-||.+. -.++.
T Consensus 184 p~~~~~~~~~~~PiTA~--Rf~SL~s~~gdDD~FSSDL~de~l~~tfG----~v~~p-lLvl~Sg~DEyvP~~vdk~~Ll 256 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAY--RFLSLASPGGDDDYFSSDLSDERLKKTFG----KVSKP-LLVLYSGKDEYVPPWVDKEALL 256 (303)
T ss_dssp ----GGTTT-SS---HH--HHHT-S-SSHHHHTHHHHHTT-HHHHTGG----G--S--EEEEEE--TT------------
T ss_pred eccccccccCCCcccHH--HHHhccCCCCcccccCCCCCHHHHHHHhc----cCCCc-eEEEecCCCceecccccccccc
Confidence 0000001 12222221 111112221 0111 14455 9999999999999874 56777
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHH--hHHHHHHHHHHH
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMK--SIEEMTDIYVFL 721 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~--~~~~~~~~~~fl 721 (734)
++++.+.... -..-.-.+.||+.|........ +.....++..||
T Consensus 257 ~rw~~a~~~~---~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 257 ERWKAATNPK---IWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccc---cccccccccccccccccccccccccccccccccccC
Confidence 8887762110 0112345779999998754432 123455566665
No 161
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.79 E-value=4e-07 Score=86.92 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=88.8
Q ss_pred eEEeCCCCcEEEEEEeC----CCC---ceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 146 LYAFSDNGKHFAYCLSK----SGS---DWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~----~g~---~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
.+.|+|+|++|++.+.. ++. ....|+.++..+......... ...+..++|||+|+.|+.+...
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~--------- 80 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS--------- 80 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEcc---------
Confidence 58899999999998872 221 124788887766543222221 1124789999999999887632
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.+.++.++++... .++..+.. ....+.|||+|++|++.... ....+|.+||..+.. ..
T Consensus 81 -----~~~~v~lyd~~~~-----~i~~~~~~--~~n~i~wsP~G~~l~~~g~~-n~~G~l~~wd~~~~~---------~i 138 (194)
T PF08662_consen 81 -----MPAKVTLYDVKGK-----KIFSFGTQ--PRNTISWSPDGRFLVLAGFG-NLNGDLEFWDVRKKK---------KI 138 (194)
T ss_pred -----CCcccEEEcCccc-----EeEeecCC--CceEEEECCCCCEEEEEEcc-CCCcEEEEEECCCCE---------Ee
Confidence 1225666666421 23333222 23468999999999986543 222579999998611 11
Q ss_pred eeeccccceEEEEEecCCeEEEEeC
Q psy4818 298 TVIPGMDHHHEIIANNGPELIVKTT 322 (734)
Q Consensus 298 ~l~~~~~~~~~~~s~dg~~l~~~s~ 322 (734)
............|||||++|+..+.
T Consensus 139 ~~~~~~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 139 STFEHSDATDVEWSPDGRYLATATT 163 (194)
T ss_pred eccccCcEEEEEEcCCCCEEEEEEe
Confidence 1111111122239999999887654
No 162
>KOG0291|consensus
Probab=98.79 E-value=2.9e-06 Score=90.88 Aligned_cols=237 Identities=13% Similarity=0.143 Sum_probs=150.4
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc-cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~-~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..++|+--|.+|||....- .+|-||+..+...+ .....-.+...+++||||+.|+-...|.
T Consensus 309 ~I~t~~~N~tGDWiA~g~~kl----gQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDg------------ 372 (893)
T KOG0291|consen 309 KILTVSFNSTGDWIAFGCSKL----GQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDG------------ 372 (893)
T ss_pred eeeEEEecccCCEEEEcCCcc----ceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCC------------
Confidence 355788889999999977643 47888887765532 2111112336899999999888776544
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
+|.+|+..++- ++.+-.++..-...+.|+.+|+.|+-.+.+ ..+..||+... ...+..+.
T Consensus 373 ----KVKvWn~~Sgf----C~vTFteHts~Vt~v~f~~~g~~llssSLD----GtVRAwDlkRY--------rNfRTft~ 432 (893)
T KOG0291|consen 373 ----KVKVWNTQSGF----CFVTFTEHTSGVTAVQFTARGNVLLSSSLD----GTVRAWDLKRY--------RNFRTFTS 432 (893)
T ss_pred ----cEEEEeccCce----EEEEeccCCCceEEEEEEecCCEEEEeecC----CeEEeeeeccc--------ceeeeecC
Confidence 67788765542 333322334456789999999998754433 46888898762 23344444
Q ss_pred cccceEEE--EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 302 GMDHHHEI--IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 302 ~~~~~~~~--~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
........ +.|.|. +++.... ..+.|++|++.++. ..+++.+.+. .+....+...+.++++.+-+ ..+.
T Consensus 433 P~p~QfscvavD~sGe-lV~AG~~--d~F~IfvWS~qTGq---llDiLsGHEg-PVs~l~f~~~~~~LaS~SWD--kTVR 503 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGE-LVCAGAQ--DSFEIFVWSVQTGQ---LLDILSGHEG-PVSGLSFSPDGSLLASGSWD--KTVR 503 (893)
T ss_pred CCceeeeEEEEcCCCC-EEEeecc--ceEEEEEEEeecCe---eeehhcCCCC-cceeeEEccccCeEEecccc--ceEE
Confidence 33333333 444465 4444443 36899999999987 5677776644 44444333335677777666 5788
Q ss_pred EEECCCC-ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTG-KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g-~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||+-+. .....|... ..+.+++++|||+++.++..+ +++-.+|.
T Consensus 504 iW~if~s~~~vEtl~i~-sdvl~vsfrPdG~elaVaTld----gqItf~d~ 549 (893)
T KOG0291|consen 504 IWDIFSSSGTVETLEIR-SDVLAVSFRPDGKELAVATLD----GQITFFDI 549 (893)
T ss_pred EEEeeccCceeeeEeec-cceeEEEEcCCCCeEEEEEec----ceEEEEEh
Confidence 8887332 123455443 335578899999999887654 36777777
No 163
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.79 E-value=1.5e-05 Score=83.91 Aligned_cols=251 Identities=14% Similarity=0.104 Sum_probs=124.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC-CCCcc--cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDY--PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~-~g~~~--~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
...+++||||++|+.+.... ..|.+++++ +|+.. ...........++++|||+.||.+...
T Consensus 37 ~~~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~------------ 100 (330)
T PRK11028 37 VQPMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN------------ 100 (330)
T ss_pred CccEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC------------
Confidence 34679999999886654322 357777775 45421 111111123578999999988766532
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc-eee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL-KTV 299 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~l 299 (734)
...|..+++.+.......+...+... ....+.++|||++|++... ..+.|+++|+++. ..+...... ...
T Consensus 101 ---~~~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~~p~g~~l~v~~~---~~~~v~v~d~~~~--g~l~~~~~~~~~~ 171 (330)
T PRK11028 101 ---ANCVSVSPLDKDGIPVAPIQIIEGLE-GCHSANIDPDNRTLWVPCL---KEDRIRLFTLSDD--GHLVAQEPAEVTT 171 (330)
T ss_pred ---CCeEEEEEECCCCCCCCceeeccCCC-cccEeEeCCCCCEEEEeeC---CCCEEEEEEECCC--CcccccCCCceec
Confidence 22577777653221111111111111 1235689999999876442 2368999998761 122110000 111
Q ss_pred eccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCC--CCCCCceEe--ecCC---CCceeEEEEE-eeCCEEEEEEE
Q psy4818 300 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKNWKTL--IPED---ENRTLDVVAA-VANNKLIVHYI 371 (734)
Q Consensus 300 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~--~~~~~~~~l--~~~~---~~~~~~~~~~-~~~~~l~~~~~ 371 (734)
..+.......|+|||+++|+.... ...|..++++. +....+..+ ++.. +... ..+.+ ++++.+|+. .
T Consensus 172 ~~g~~p~~~~~~pdg~~lyv~~~~---~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~i~~~pdg~~lyv~-~ 246 (330)
T PRK11028 172 VEGAGPRHMVFHPNQQYAYCVNEL---NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWA-ADIHITPDGRHLYAC-D 246 (330)
T ss_pred CCCCCCceEEECCCCCEEEEEecC---CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccc-eeEEECCCCCEEEEe-c
Confidence 122222333589999988775432 24577777753 221111111 1111 0111 12323 343455554 3
Q ss_pred eCCceeEEEEECCC-Cceee---eeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 372 QNVRSVMDLHDLNT-GKRLH---SFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 372 ~~~~~~l~~~dl~~-g~~~~---~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ +...|.+|++.. +..++ .+.... ....+.++++++.++++.... ..+.++++
T Consensus 247 ~-~~~~I~v~~i~~~~~~~~~~~~~~~~~-~p~~~~~~~dg~~l~va~~~~---~~v~v~~~ 303 (330)
T PRK11028 247 R-TASLISVFSVSEDGSVLSFEGHQPTET-QPRGFNIDHSGKYLIAAGQKS---HHISVYEI 303 (330)
T ss_pred C-CCCeEEEEEEeCCCCeEEEeEEEeccc-cCCceEECCCCCEEEEEEccC---CcEEEEEE
Confidence 3 234677777632 22222 222111 123566788998888765422 24555544
No 164
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.77 E-value=7.6e-07 Score=85.04 Aligned_cols=160 Identities=15% Similarity=0.202 Sum_probs=94.4
Q ss_pred CCcEEeCCeEEEEEE-c---CCCC---eeEEEEEeCCCCCeEEE-eCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCC
Q psy4818 94 SAPQRQENNYFYFHN-K---GLQN---HSILYVQRNLTGSTEVF-LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS 165 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~-~---~~~~---~~~l~~~~~~~g~~~~l-~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~ 165 (734)
-.|.+.|.++...-. + .++. ...||+.+..+.....+ ++. ...+..++|||+|+++|......
T Consensus 11 ~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~-------~~~I~~~~WsP~g~~favi~g~~-- 81 (194)
T PF08662_consen 11 LHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKK-------EGPIHDVAWSPNGNEFAVIYGSM-- 81 (194)
T ss_pred EEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccC-------CCceEEEEECcCCCEEEEEEccC--
Confidence 345678888776544 1 1121 24566665443332222 221 12388999999999998776322
Q ss_pred ceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 166 DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
...+.++|+++..... ........+.|||+|+.|+...... ....|.++++.+.. .+...
T Consensus 82 -~~~v~lyd~~~~~i~~--~~~~~~n~i~wsP~G~~l~~~g~~n-------------~~G~l~~wd~~~~~----~i~~~ 141 (194)
T PF08662_consen 82 -PAKVTLYDVKGKKIFS--FGTQPRNTISWSPDGRFLVLAGFGN-------------LNGDLEFWDVRKKK----KISTF 141 (194)
T ss_pred -CcccEEEcCcccEeEe--ecCCCceEEEECCCCCEEEEEEccC-------------CCcEEEEEECCCCE----Eeecc
Confidence 2378899987333222 2222235799999999999987632 22368888887432 23222
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCC--CCceEEEEeCCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNT--QGSDLHYFDLHS 284 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~i~~~d~~~ 284 (734)
... ....+.|||||++++....... ..+.+.+|+..+
T Consensus 142 -~~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 142 -EHS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred -ccC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecC
Confidence 122 3467899999999997654211 124555565544
No 165
>KOG2984|consensus
Probab=98.77 E-value=6e-09 Score=93.82 Aligned_cols=210 Identities=17% Similarity=0.162 Sum_probs=119.8
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
.|+.+-|.-|+... .|.+...++....-+.++..|.|| ||.+--. .+...-+.-.+|..+|++-+.. ++-.+
T Consensus 44 ~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpG---YG~SrPP-~Rkf~~~ff~~Da~~avdLM~a---Lk~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPG---YGTSRPP-ERKFEVQFFMKDAEYAVDLMEA---LKLEP 115 (277)
T ss_pred eeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCC---CCCCCCC-cccchHHHHHHhHHHHHHHHHH---hCCCC
Confidence 56666787666554 466666565544348999999999 7643111 1111111223566666666644 46678
Q ss_pred EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc--hhccccccc---cCccccc--------ccCCCCCHHHHH-HHHh
Q psy4818 570 ITIMGGSNGGLLVGACLNQRPELYGAALILVGAL--DMLRFNKFT---IAYYSES--------EFGSPNNKTHFH-NLLS 635 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~--d~~~~~~~~---~~~~~~~--------~~g~~~~~~~~~-~~~~ 635 (734)
+.|+|+|-||..++.+|+++++.+...|...+-. +-...+.+. .-..|.. -||...-+...+ +...
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999998655444433321 111111000 0011211 122110011110 0000
Q ss_pred CCccC--------CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch
Q psy4818 636 YSPLH--------NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL 707 (734)
Q Consensus 636 ~sp~~--------~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (734)
..-++ ....| .+++| +||+||..|+.|+-.++--+-..+.. .++.++|.++|.+.-..
T Consensus 196 v~qf~~~~dG~fCr~~lp--~vkcP-tli~hG~kDp~~~~~hv~fi~~~~~~-----------a~~~~~peGkHn~hLry 261 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLP--QVKCP-TLIMHGGKDPFCGDPHVCFIPVLKSL-----------AKVEIHPEGKHNFHLRY 261 (277)
T ss_pred HHHHhhcCCCchHhhhcc--cccCC-eeEeeCCcCCCCCCCCccchhhhccc-----------ceEEEccCCCcceeeec
Confidence 01111 11122 28888 99999999999998886544433332 37888999999987543
Q ss_pred HHhHHHHHHHHHHHHH
Q psy4818 708 MKSIEEMTDIYVFLMK 723 (734)
Q Consensus 708 ~~~~~~~~~~~~fl~~ 723 (734)
. .+....+.+||.+
T Consensus 262 a--~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 262 A--KEFNKLVLDFLKS 275 (277)
T ss_pred h--HHHHHHHHHHHhc
Confidence 3 4667778888864
No 166
>PTZ00420 coronin; Provisional
Probab=98.75 E-value=2e-05 Score=86.75 Aligned_cols=208 Identities=10% Similarity=0.028 Sum_probs=116.6
Q ss_pred CcEEEeeEEeCCC-CcEEEEEEeCCCCceEEEEEEECCCCCc-cc--------ccccccccCeeEEEcCCcEEEEEEEec
Q psy4818 140 GTTALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKD-YP--------EVLKNVKFPSISWTHDHKGFFYNQYCD 209 (734)
Q Consensus 140 ~~~~~~~~~~SPD-G~~la~~~~~~g~~~~~l~v~dl~~g~~-~~--------~~~~~~~~~~~~wSpDg~~l~y~~~~~ 209 (734)
+...+..++|||+ +++||-+. ....|++||+.++.. .. .......+..++|+|++..++.+...+
T Consensus 73 H~~~V~~lafsP~~~~lLASgS-----~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~D 147 (568)
T PTZ00420 73 HTSSILDLQFNPCFSEILASGS-----EDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD 147 (568)
T ss_pred CCCCEEEEEEcCCCCCEEEEEe-----CCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCC
Confidence 3446889999997 67666433 335799999976431 11 011112346889999998877654322
Q ss_pred CCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc
Q psy4818 210 INGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 289 (734)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 289 (734)
..|.+|++.++.. +..+.. ...+.++.|+|||+.|+... ....|.+||+.++.
T Consensus 148 ---------------gtIrIWDl~tg~~--~~~i~~---~~~V~SlswspdG~lLat~s----~D~~IrIwD~Rsg~--- 200 (568)
T PTZ00420 148 ---------------SFVNIWDIENEKR--AFQINM---PKKLSSLKWNIKGNLLSGTC----VGKHMHIIDPRKQE--- 200 (568)
T ss_pred ---------------CeEEEEECCCCcE--EEEEec---CCcEEEEEECCCCCEEEEEe----cCCEEEEEECCCCc---
Confidence 2688999987642 122221 22467899999999887532 22579999998731
Q ss_pred ccCCCCceeeeccccc--eEEE----EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC
Q psy4818 290 ISGKFPLKTVIPGMDH--HHEI----IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN 363 (734)
Q Consensus 290 l~~~~~~~~l~~~~~~--~~~~----~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 363 (734)
....+..+... .... ++++++.|+-.+........|.+||+.+... ....+..+.....+......+.
T Consensus 201 -----~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~ld~~~~~L~p~~D~~t 274 (568)
T PTZ00420 201 -----IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMSIDNASAPLIPHYDEST 274 (568)
T ss_pred -----EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEEecCCccceEEeeeCCC
Confidence 11222222111 1111 3477776665554333334699999875321 1222211111122222222333
Q ss_pred CEEEEEEEeCCceeEEEEECCCCc
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
+.++++...+ ..+++|++..+.
T Consensus 275 g~l~lsGkGD--~tIr~~e~~~~~ 296 (568)
T PTZ00420 275 GLIYLIGKGD--GNCRYYQHSLGS 296 (568)
T ss_pred CCEEEEEECC--CeEEEEEccCCc
Confidence 5666666544 578888886553
No 167
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.73 E-value=2.8e-07 Score=110.83 Aligned_cols=233 Identities=10% Similarity=0.021 Sum_probs=126.9
Q ss_pred EeEEEEEeccccC--CCCCcEEEEecCCCCCcCCccccH--HHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 472 VPMYIIHRVGALR--NRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 472 i~~~~~~p~~~~~--~~~~P~vv~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+..+-|.|...+. ....|.||++||.......+...+ .+..+|.++||.|+++|+.. ... ... . ...
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~-~~~-----~~~--~-~~~ 119 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGS-PDK-----VEG--G-MER 119 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCC-CCh-----hHc--C-ccC
Confidence 4455555543211 124478899999876665544332 23567777899999999622 111 100 0 112
Q ss_pred chhHH----HHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhccccccc----------
Q psy4818 548 CFDDF----QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFNKFT---------- 612 (734)
Q Consensus 548 ~~~D~----~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~---------- 612 (734)
.+.|. .++++.+.+.. .+++.++|+|+||.+++.+++.+ +++++.+|+.+..+|+.......
T Consensus 120 ~l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~ 196 (994)
T PRK07868 120 NLADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAA 196 (994)
T ss_pred CHHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhccc
Confidence 33333 33333333222 24799999999999998887644 55788887654443321100000
Q ss_pred -----------cCcccc---------------------cccCCCC---C---------------------HHHHHHHHhC
Q psy4818 613 -----------IAYYSE---------------------SEFGSPN---N---------------------KTHFHNLLSY 636 (734)
Q Consensus 613 -----------~~~~~~---------------------~~~g~~~---~---------------------~~~~~~~~~~ 636 (734)
.-+.|. ..+.++. + .+....+...
T Consensus 197 ~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~ 276 (994)
T PRK07868 197 DFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAH 276 (994)
T ss_pred ccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHh
Confidence 000000 0001100 0 0000111110
Q ss_pred -CccC----------CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEE-EEeCCCCCCCC
Q psy4818 637 -SPLH----------NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL-RVEQDAGHGQG 704 (734)
Q Consensus 637 -sp~~----------~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~-~~~~~~gH~~~ 704 (734)
.... ++. +++.| +|+++|+.|..+|+..+..+.+.+... .+ .+.+++||...
T Consensus 277 n~~~~g~~~~~~~~~~L~----~i~~P-~L~i~G~~D~ivp~~~~~~l~~~i~~a-----------~~~~~~~~~GH~g~ 340 (994)
T PRK07868 277 NRMMTGGFAINGQMVTLA----DITCP-VLAFVGEVDDIGQPASVRGIRRAAPNA-----------EVYESLIRAGHFGL 340 (994)
T ss_pred CcccCceEEECCEEcchh----hCCCC-EEEEEeCCCCCCCHHHHHHHHHhCCCC-----------eEEEEeCCCCCEee
Confidence 0111 122 27788 999999999999999988887665332 33 56689999742
Q ss_pred -CchHHhHHHHHHHHHHHHHHcCCCCCCC
Q psy4818 705 -TPLMKSIEEMTDIYVFLMKSLGLKYYPD 732 (734)
Q Consensus 705 -~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 732 (734)
.......+.+..+.+||.++=+....|+
T Consensus 341 ~~g~~a~~~~wp~i~~wl~~~~~~~~~~~ 369 (994)
T PRK07868 341 VVGSRAAQQTWPTVADWVKWLEGDGDKPE 369 (994)
T ss_pred eechhhhhhhChHHHHHHHHhccCCCCCc
Confidence 1112235778889999999876555553
No 168
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.72 E-value=1.6e-08 Score=100.16 Aligned_cols=78 Identities=22% Similarity=0.128 Sum_probs=61.5
Q ss_pred eEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEE
Q psy4818 519 GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 598 (734)
Q Consensus 519 ~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 598 (734)
|.|+++|.||.|..... ..........+|+.+.++.+.+.-- -+++.++|+|+||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG--IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC--CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 67999999996643311 1123445568899999999888633 34599999999999999999999999999999
Q ss_pred cCCc
Q psy4818 599 LVGA 602 (734)
Q Consensus 599 ~~~~ 602 (734)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 8885
No 169
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.70 E-value=2.5e-08 Score=112.64 Aligned_cols=127 Identities=21% Similarity=0.241 Sum_probs=82.0
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCC---ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc--cC
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL---PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL--KK 545 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~--~~ 545 (734)
-+..-|+.|+......+.||+||+|||...... ..+.. ..++++++.+||.+|||-|- +| |-...... .+
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~--~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~g 182 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG--ASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSG 182 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT--HHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBS
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccc--cccccCCCEEEEEecccccc-cc--cccccccccCch
Confidence 578899999987545579999999998433222 22222 34556679999999999642 22 11100000 12
Q ss_pred CCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCc
Q psy4818 546 QNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGA 602 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 602 (734)
-..+.|.+.|++|+.++ ---||++|-|+|+|+||..+..++.. ...+|+.+|+.+|.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 33578999999999876 12699999999999999999998764 23599999999883
No 170
>KOG0275|consensus
Probab=98.69 E-value=5.1e-07 Score=86.87 Aligned_cols=244 Identities=15% Similarity=0.109 Sum_probs=142.6
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc---------ccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV---------KFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~---------~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
+....|||||++|+- |+-..-|-|||-.+|+...+..-.. .+--+.||.|+.-++-.+.+.
T Consensus 216 ~EcA~FSPDgqyLvs-----gSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG----- 285 (508)
T KOG0275|consen 216 VECARFSPDGQYLVS-----GSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG----- 285 (508)
T ss_pred hhheeeCCCCceEee-----ccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC-----
Confidence 557899999999984 4444579999999998654432211 113456777777666555433
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
+|.+|++.+++-- .-|+. .+..-+..+.||.|+..|+- .+....+.+--+.+|+ +|
T Consensus 286 -----------kIKvWri~tG~Cl--RrFdr-AHtkGvt~l~FSrD~SqiLS----~sfD~tvRiHGlKSGK--~L---- 341 (508)
T KOG0275|consen 286 -----------KIKVWRIETGQCL--RRFDR-AHTKGVTCLSFSRDNSQILS----ASFDQTVRIHGLKSGK--CL---- 341 (508)
T ss_pred -----------cEEEEEEecchHH--HHhhh-hhccCeeEEEEccCcchhhc----ccccceEEEeccccch--hH----
Confidence 5777777776521 11221 22334567899999999872 2222445555555531 11
Q ss_pred CceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeC-CEEEEEEE
Q psy4818 295 PLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VAN-NKLIVHYI 371 (734)
Q Consensus 295 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~-~~l~~~~~ 371 (734)
.....+...... .+++||.+++-.+.. ..+-+|+.++.+. ....-+...+..+..+.+ +.+ .++++...
T Consensus 342 --KEfrGHsSyvn~a~ft~dG~~iisaSsD----gtvkvW~~KtteC--~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr 413 (508)
T KOG0275|consen 342 --KEFRGHSSYVNEATFTDDGHHIISASSD----GTVKVWHGKTTEC--LSTFKPLGTDYPVNSVILLPKNPEHFIVCNR 413 (508)
T ss_pred --HHhcCccccccceEEcCCCCeEEEecCC----ccEEEecCcchhh--hhhccCCCCcccceeEEEcCCCCceEEEEcC
Confidence 111111111111 389999988755443 4578888877652 122222222344444433 332 46666543
Q ss_pred eCCceeEEEEECCCCceeeeeCCC---CceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCcee
Q psy4818 372 QNVRSVMDLHDLNTGKRLHSFPLD---LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPT 442 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~~~~~l~~~---~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~ 442 (734)
. +.+|++++ .|..++.++.. -|.......+|.|..++...... .+|-+.. .+|+++.+
T Consensus 414 s---ntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~----vlYCF~~-----~sG~LE~t 474 (508)
T KOG0275|consen 414 S---NTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDG----VLYCFSV-----LSGKLERT 474 (508)
T ss_pred C---CeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccCc----EEEEEEe-----ecCceeee
Confidence 3 47999999 79888888654 34444666788887776655443 5788887 56754443
No 171
>KOG1407|consensus
Probab=98.68 E-value=5.3e-06 Score=78.11 Aligned_cols=232 Identities=13% Similarity=0.155 Sum_probs=140.5
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
++.++....|+|-..-+.++.+.+ ..|++||...+++...+........+.|||||+++++...++
T Consensus 63 h~~svdql~w~~~~~d~~atas~d----k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD---------- 128 (313)
T KOG1407|consen 63 HTDSVDQLCWDPKHPDLFATASGD----KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD---------- 128 (313)
T ss_pred CCcchhhheeCCCCCcceEEecCC----ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc----------
Confidence 345677889999887666665422 579999999998765433322235789999999999987644
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|-.++..+-+. +.++ .-..+.....|+-++...+++.. .+.-+|.-|+ .. .++..+
T Consensus 129 ------~it~id~r~~~~----~~~~-~~~~e~ne~~w~~~nd~Fflt~G--lG~v~ILsyp--sL--------kpv~si 185 (313)
T KOG1407|consen 129 ------RITFIDARTYKI----VNEE-QFKFEVNEISWNNSNDLFFLTNG--LGCVEILSYP--SL--------KPVQSI 185 (313)
T ss_pred ------cEEEEEecccce----eehh-cccceeeeeeecCCCCEEEEecC--CceEEEEecc--cc--------cccccc
Confidence 344454443221 1111 11223346788866665544321 1212333333 21 123333
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
..+...-+.. ++|+|++|+.-+. +..+-+||++.-. +...++-. +..+..+.+.-+++++.+++++ .-|
T Consensus 186 ~AH~snCicI~f~p~GryfA~GsA----DAlvSLWD~~ELi---C~R~isRl-dwpVRTlSFS~dg~~lASaSED--h~I 255 (313)
T KOG1407|consen 186 KAHPSNCICIEFDPDGRYFATGSA----DALVSLWDVDELI---CERCISRL-DWPVRTLSFSHDGRMLASASED--HFI 255 (313)
T ss_pred ccCCcceEEEEECCCCceEeeccc----cceeeccChhHhh---hheeeccc-cCceEEEEeccCcceeeccCcc--ceE
Confidence 3333334444 9999998886433 3457778886543 34444444 3556666666668888888777 356
Q ss_pred EEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCC
Q psy4818 379 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFL 419 (734)
Q Consensus 379 ~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~ 419 (734)
-+-+.++|..+.+|+-. +....+.+.|+..-|+|.++...
T Consensus 256 DIA~vetGd~~~eI~~~-~~t~tVAWHPk~~LLAyA~ddk~ 295 (313)
T KOG1407|consen 256 DIAEVETGDRVWEIPCE-GPTFTVAWHPKRPLLAYACDDKD 295 (313)
T ss_pred EeEecccCCeEEEeecc-CCceeEEecCCCceeeEEecCCC
Confidence 66677899887777643 34447888998877777776544
No 172
>KOG2112|consensus
Probab=98.68 E-value=8.2e-07 Score=81.94 Aligned_cols=187 Identities=20% Similarity=0.217 Sum_probs=117.5
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecc------cCCCCCchhhhcccccc-CCCchhHHHHH---HHH
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR------GGGELGEDWHNAGRLLK-KQNCFDDFQAA---AEY 558 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r------G~~~~g~~~~~~~~~~~-~~~~~~D~~~~---~~~ 558 (734)
-+||++||-..+... +. .++.-+.-.+.-.++|.-+ -+|..+..|.+...... ...+-+.+..+ +..
T Consensus 4 atIi~LHglGDsg~~--~~-~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSG--WA-QFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred EEEEEEecCCCCCcc--HH-HHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 479999996444433 22 2222244446666666322 14555667777533221 22233333333 334
Q ss_pred HHHc---CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHh
Q psy4818 559 MINK---KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLS 635 (734)
Q Consensus 559 l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 635 (734)
|+++ .-++++||+|.|.|+||.+++.++..+|....+++...++.--.. -+.|.
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~-------------~~~~~---------- 137 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS-------------IGLPG---------- 137 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch-------------hhccC----------
Confidence 4443 337899999999999999999999888655444444444432100 00000
Q ss_pred CCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHH
Q psy4818 636 YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMT 715 (734)
Q Consensus 636 ~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 715 (734)
... ..+++|++..||+.|+.||..=..+....|+.. +..++++.|++-+|.... ++..
T Consensus 138 ------~~~---~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~-------~~~~~f~~y~g~~h~~~~------~e~~ 195 (206)
T KOG2112|consen 138 ------WLP---GVNYTPILLCHGTADPLVPFRFGEKSAQFLKSL-------GVRVTFKPYPGLGHSTSP------QELD 195 (206)
T ss_pred ------Ccc---ccCcchhheecccCCceeehHHHHHHHHHHHHc-------CCceeeeecCCccccccH------HHHH
Confidence 000 022345999999999999999999999999998 888999999999997753 4455
Q ss_pred HHHHHHHH
Q psy4818 716 DIYVFLMK 723 (734)
Q Consensus 716 ~~~~fl~~ 723 (734)
++..|+.+
T Consensus 196 ~~~~~~~~ 203 (206)
T KOG2112|consen 196 DLKSWIKT 203 (206)
T ss_pred HHHHHHHH
Confidence 67788776
No 173
>PTZ00420 coronin; Provisional
Probab=98.68 E-value=3.7e-05 Score=84.74 Aligned_cols=241 Identities=8% Similarity=-0.028 Sum_probs=131.3
Q ss_pred EeCCCCcEEEEEEeC-CCCceEEEEEEECCCCCcccccc-cccccCeeEEEcC-CcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 148 AFSDNGKHFAYCLSK-SGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHD-HKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 148 ~~SPDG~~la~~~~~-~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpD-g~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
.++..++++|+..+. +|+-...|.++++.....+.... ....+..++|+|+ +..|+-...+.
T Consensus 33 ~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~Dg--------------- 97 (568)
T PTZ00420 33 GIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDL--------------- 97 (568)
T ss_pred eEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCC---------------
Confidence 356668888887764 34445678888876554332211 1223468899997 55555444332
Q ss_pred cEEEEEECCCCCC--C----CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 225 QKIYYHVLGTEQD--K----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 225 ~~l~~~~l~t~~~--~----~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|.+|++.+... . .+..+. .+...+..+.|+|++..++.+++. ...|.+||+.++. ....
T Consensus 98 -tIrIWDi~t~~~~~~~i~~p~~~L~--gH~~~V~sVaf~P~g~~iLaSgS~---DgtIrIWDl~tg~--------~~~~ 163 (568)
T PTZ00420 98 -TIRVWEIPHNDESVKEIKDPQCILK--GHKKKISIIDWNPMNYYIMCSSGF---DSFVNIWDIENEK--------RAFQ 163 (568)
T ss_pred -eEEEEECCCCCccccccccceEEee--cCCCcEEEEEECCCCCeEEEEEeC---CCeEEEEECCCCc--------EEEE
Confidence 688888865321 0 111222 223356789999999988765543 2579999998731 1111
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeE-EEEE---eeCCEEEEEEEeC
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLD-VVAA---VANNKLIVHYIQN 373 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~~---~~~~~l~~~~~~~ 373 (734)
+ ......... |+++|+.|+..+. +..|.+||+.++.. ...+..+. ..... .+.. ..++..+++...+
T Consensus 164 i-~~~~~V~SlswspdG~lLat~s~----D~~IrIwD~Rsg~~--i~tl~gH~-g~~~s~~v~~~~fs~d~~~IlTtG~d 235 (568)
T PTZ00420 164 I-NMPKKLSSLKWNIKGNLLSGTCV----GKHMHIIDPRKQEI--ASSFHIHD-GGKNTKNIWIDGLGGDDNYILSTGFS 235 (568)
T ss_pred E-ecCCcEEEEEECCCCCEEEEEec----CCEEEEEECCCCcE--EEEEeccc-CCceeEEEEeeeEcCCCCEEEEEEcC
Confidence 2 111222333 9999997754332 34699999987641 22332232 22211 1111 1223444444433
Q ss_pred C--ceeEEEEECCC-CceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 V--RSVMDLHDLNT-GKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~--~~~l~~~dl~~-g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. ..++.+||+.+ ++.+..+... .+.+ ....+++.+.++++.++.. .++.|++
T Consensus 236 ~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L-~p~~D~~tg~l~lsGkGD~---tIr~~e~ 292 (568)
T PTZ00420 236 KNNMREMKLWDLKNTTSALVTMSIDNASAPL-IPHYDESTGLIYLIGKGDG---NCRYYQH 292 (568)
T ss_pred CCCccEEEEEECCCCCCceEEEEecCCccce-EEeeeCCCCCEEEEEECCC---eEEEEEc
Confidence 3 24799999964 4444444333 2333 1233445556666655543 6777777
No 174
>KOG0318|consensus
Probab=98.67 E-value=5.8e-06 Score=85.11 Aligned_cols=227 Identities=14% Similarity=0.128 Sum_probs=125.9
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc----cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
-+..+++||||++.|-+..+ ..++++|=.+|+.+-... ....+.+++||||+++|+-++.+.
T Consensus 192 FV~~VRysPDG~~Fat~gsD-----gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk--------- 257 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGSD-----GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK--------- 257 (603)
T ss_pred ceeeEEECCCCCeEEEecCC-----ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc---------
Confidence 47789999999998855432 479999999988543211 111346899999999999888654
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.+.+|++.+............-+. ...+.-|. .+..|.+ +-. ..|-+++.+.. . ...
T Consensus 258 -------t~KIWdVs~~slv~t~~~~~~v~d-qqvG~lWq-kd~lItV--Sl~---G~in~ln~~d~--------~-~~~ 314 (603)
T KOG0318|consen 258 -------TIKIWDVSTNSLVSTWPMGSTVED-QQVGCLWQ-KDHLITV--SLS---GTINYLNPSDP--------S-VLK 314 (603)
T ss_pred -------eEEEEEeeccceEEEeecCCchhc-eEEEEEEe-CCeEEEE--EcC---cEEEEecccCC--------C-hhh
Confidence 566777776543222222222112 44567787 3333332 221 35666777662 2 222
Q ss_pred eecccc-ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 299 VIPGMD-HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 299 l~~~~~-~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
++.+.. ..... .++|+++||-.+ ..+.|..|+..++.. ..+........+..+.....+.++-..-++
T Consensus 315 ~i~GHnK~ITaLtv~~d~~~i~Sgs----yDG~I~~W~~~~g~~---~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd--- 384 (603)
T KOG0318|consen 315 VISGHNKSITALTVSPDGKTIYSGS----YDGHINSWDSGSGTS---DRLAGKGHTNQIKGMAASESGELFTIGWDD--- 384 (603)
T ss_pred eecccccceeEEEEcCCCCEEEeec----cCceEEEEecCCccc---cccccccccceEEEEeecCCCcEEEEecCC---
Confidence 333333 33333 889997776322 245799999877652 334444334455555444424444444333
Q ss_pred eEEEEECCCCceee--eeCCCCceEEeeccCcccceEEEEEec
Q psy4818 377 VMDLHDLNTGKRLH--SFPLDLGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 377 ~l~~~dl~~g~~~~--~l~~~~g~v~~~~~~~d~~~l~~~~ss 417 (734)
.|.+.++..+.... .+.++.. --+++...++..+++++-+
T Consensus 385 ~l~~~~~~~~~~t~~~~~~lg~Q-P~~lav~~d~~~avv~~~~ 426 (603)
T KOG0318|consen 385 TLRVISLKDNGYTKSEVVKLGSQ-PKGLAVLSDGGTAVVACIS 426 (603)
T ss_pred eEEEEecccCcccccceeecCCC-ceeEEEcCCCCEEEEEecC
Confidence 57777774332111 1222211 1144455566566666654
No 175
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.67 E-value=9.8e-06 Score=85.49 Aligned_cols=249 Identities=17% Similarity=0.152 Sum_probs=122.8
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
....+||||+++.. .+++| .|.++|+.+++.+.....+....++++|+||++++..... +
T Consensus 40 ~~~~~s~Dgr~~yv-~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~---------------~ 99 (369)
T PF02239_consen 40 AGLKFSPDGRYLYV-ANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYE---------------P 99 (369)
T ss_dssp EEEE-TT-SSEEEE-EETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEE---------------T
T ss_pred eEEEecCCCCEEEE-EcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecC---------------C
Confidence 45789999998655 45443 5999999999866543333334689999999988766543 2
Q ss_pred cEEEEEECCCCCCCCeeEE-ecCC--CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce-eee
Q psy4818 225 QKIYYHVLGTEQDKDIPVV-EFPN--GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVI 300 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~-~~~~--~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-~l~ 300 (734)
..+.+++..+.+.-...-. ..+. ......++.-||++...++... +..+||++|..+. .++. ..+
T Consensus 100 ~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk---d~~~I~vVdy~d~--------~~~~~~~i 168 (369)
T PF02239_consen 100 GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK---DTGEIWVVDYSDP--------KNLKVTTI 168 (369)
T ss_dssp TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET---TTTEEEEEETTTS--------SCEEEEEE
T ss_pred CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEc---cCCeEEEEEeccc--------cccceeee
Confidence 3677777665432111000 0000 0113345667888886665543 2368999998772 1111 111
Q ss_pred c-cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC---------------------CC---ce---------Ee
Q psy4818 301 P-GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE---------------------KN---WK---------TL 346 (734)
Q Consensus 301 ~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~---------------------~~---~~---------~l 346 (734)
. +.......|+|+|++++...+.. .+|..+|.++.+. .. |. .+
T Consensus 169 ~~g~~~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ 245 (369)
T PF02239_consen 169 KVGRFPHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPL 245 (369)
T ss_dssp E--TTEEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEE
T ss_pred cccccccccccCcccceeeeccccc---ceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceeccc
Confidence 1 11111224899998877654431 1344444433210 00 00 01
Q ss_pred ecCC--------CCceeEEEE----------EeeCCEEEEEEE-eCCceeEEEEECCCCceeeeeCCCCc-eEEeeccCc
Q psy4818 347 IPED--------ENRTLDVVA----------AVANNKLIVHYI-QNVRSVMDLHDLNTGKRLHSFPLDLG-QITHISGRR 406 (734)
Q Consensus 347 ~~~~--------~~~~~~~~~----------~~~~~~l~~~~~-~~~~~~l~~~dl~~g~~~~~l~~~~g-~v~~~~~~~ 406 (734)
+..+ .+.++..+. .+++.++++... ......|.++|.++-+....+....+ .+..+.+++
T Consensus 246 ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~ 325 (369)
T PF02239_consen 246 IGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNP 325 (369)
T ss_dssp EE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-T
T ss_pred ccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECC
Confidence 1100 011111111 123234444311 12245788899877766555543222 245788899
Q ss_pred ccceEEEEEecCCCCceEEEEeC
Q psy4818 407 KYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 407 d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
||++++++.-... ..+.+||.
T Consensus 326 dG~~v~vS~~~~~--~~i~v~D~ 346 (369)
T PF02239_consen 326 DGKEVWVSVWDGN--GAIVVYDA 346 (369)
T ss_dssp TSSEEEEEEE--T--TEEEEEET
T ss_pred CCCEEEEEEecCC--CEEEEEEC
Confidence 9999998754433 38999998
No 176
>PTZ00421 coronin; Provisional
Probab=98.67 E-value=2.6e-05 Score=85.36 Aligned_cols=240 Identities=13% Similarity=0.070 Sum_probs=127.9
Q ss_pred EeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc---ccc-cccccCeeEEEc-CCcEEEEEEEecCCCCCCCCccccc
Q psy4818 148 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP---EVL-KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 148 ~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~---~~~-~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
-++++++++|+..+..|. ...+...+.|+... ... ....+..+.|+| |++.|+..+.+.
T Consensus 35 ~~~~n~~~~a~~w~~~gg---~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg------------- 98 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGS---TAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG------------- 98 (493)
T ss_pred cEeECCceEEEEEecCCc---eEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC-------------
Confidence 367778888888776554 12233334455321 111 112346899999 888776665433
Q ss_pred CCcEEEEEECCCCCC-----CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 223 MGQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~-----~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|.+|++.+... ..+..+. .+...+..+.|+|++..++++.+. ...|.+||+.++. ...
T Consensus 99 ---tIkIWdi~~~~~~~~~~~~l~~L~--gH~~~V~~l~f~P~~~~iLaSgs~---DgtVrIWDl~tg~--------~~~ 162 (493)
T PTZ00421 99 ---TIMGWGIPEEGLTQNISDPIVHLQ--GHTKKVGIVSFHPSAMNVLASAGA---DMVVNVWDVERGK--------AVE 162 (493)
T ss_pred ---EEEEEecCCCccccccCcceEEec--CCCCcEEEEEeCcCCCCEEEEEeC---CCEEEEEECCCCe--------EEE
Confidence 688888865421 1112222 233456679999997654444432 2679999998731 122
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEe-CC
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQ-NV 374 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~-~~ 374 (734)
.+.......... |+++|+.|+..+. +..|.+||+.++.. ...+..+. ........+ .+++.++..... ..
T Consensus 163 ~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~rsg~~--v~tl~~H~-~~~~~~~~w~~~~~~ivt~G~s~s~ 235 (493)
T PTZ00421 163 VIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDPRDGTI--VSSVEAHA-SAKSQRCLWAKRKDLIITLGCSKSQ 235 (493)
T ss_pred EEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEECCCCcE--EEEEecCC-CCcceEEEEcCCCCeEEEEecCCCC
Confidence 222222233333 9999987664332 35689999977541 23333332 222222223 333344333221 22
Q ss_pred ceeEEEEECCCCc-eeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 375 RSVMDLHDLNTGK-RLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 ~~~l~~~dl~~g~-~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...|.+||+.+.. ....+... ...+....++++++.+++...+. ..+..||+
T Consensus 236 Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgD---g~Iriwdl 289 (493)
T PTZ00421 236 QRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGE---GNIRCFEL 289 (493)
T ss_pred CCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCC---CeEEEEEe
Confidence 3579999996543 22223222 22233344567776665543322 36888888
No 177
>KOG0973|consensus
Probab=98.66 E-value=8.6e-07 Score=98.86 Aligned_cols=242 Identities=15% Similarity=0.130 Sum_probs=131.7
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC----------C-Ccc--------cccccccccCeeEEEcCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----------G-KDY--------PEVLKNVKFPSISWTHDHK 200 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~----------g-~~~--------~~~~~~~~~~~~~wSpDg~ 200 (734)
+...+..+.|||||++||..+ +...|.||..+. | ..- .......++..+.||||++
T Consensus 68 h~~sv~CVR~S~dG~~lAsGS-----DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~ 142 (942)
T KOG0973|consen 68 HDGSVNCVRFSPDGSYLASGS-----DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS 142 (942)
T ss_pred ccCceeEEEECCCCCeEeecc-----CcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc
Confidence 445678899999999999654 446677777652 1 100 0111223457899999999
Q ss_pred EEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEE
Q psy4818 201 GFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYF 280 (734)
Q Consensus 201 ~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~ 280 (734)
.|+-...+. .|.+|+..+- +.+.++. ++...+-++.|.|-|+|++-.+ +...|.+|
T Consensus 143 ~lvS~s~Dn----------------sViiwn~~tF--~~~~vl~--~H~s~VKGvs~DP~Gky~ASqs----dDrtikvw 198 (942)
T KOG0973|consen 143 LLVSVSLDN----------------SVIIWNAKTF--ELLKVLR--GHQSLVKGVSWDPIGKYFASQS----DDRTLKVW 198 (942)
T ss_pred EEEEecccc----------------eEEEEccccc--eeeeeee--cccccccceEECCccCeeeeec----CCceEEEE
Confidence 888877654 5777776655 2233333 3444667899999999999543 23567777
Q ss_pred eCCCCCCCcccCCCCceeee-ccccc-----eE-E-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCC
Q psy4818 281 DLHSLPDGKISGKFPLKTVI-PGMDH-----HH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN 352 (734)
Q Consensus 281 d~~~~~~~~l~~~~~~~~l~-~~~~~-----~~-~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 352 (734)
+..+ ......+ ..++. .+ . .|||||++|.....-+++...+-.++-.+=+ .-..++.+...
T Consensus 199 rt~d---------w~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk--~~~~LvGH~~p 267 (942)
T KOG0973|consen 199 RTSD---------WGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWK--VDKDLVGHSAP 267 (942)
T ss_pred Eccc---------ceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCce--eeeeeecCCCc
Confidence 7544 1112222 12211 11 1 2999999887654444444445555542210 00245544422
Q ss_pred ceeEEEEE-----eeCCE------------EEEEEEeCCceeEEEEECCCCceeeeeC-CCCceEEeeccCcccceEEEE
Q psy4818 353 RTLDVVAA-----VANNK------------LIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 353 ~~~~~~~~-----~~~~~------------l~~~~~~~~~~~l~~~dl~~g~~~~~l~-~~~g~v~~~~~~~d~~~l~~~ 414 (734)
++-+.+ -++.. ++....+| ..|.+|....-+.+-.+. .-.-+|..++|++||-.++ .
T Consensus 268 --~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD--rSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~Lf-a 342 (942)
T KOG0973|consen 268 --VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD--RSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLF-A 342 (942)
T ss_pred --eEEEEeChHHhccccccCCccCCCcceEEEEEecCC--ccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEE-E
Confidence 121111 01011 34444444 468888652222211111 1145677899999985544 3
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
+|-. +.++.+..
T Consensus 343 cS~D---GtV~~i~F 354 (942)
T KOG0973|consen 343 CSLD---GTVALIHF 354 (942)
T ss_pred EecC---CeEEEEEc
Confidence 3322 35666665
No 178
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.66 E-value=5e-07 Score=83.91 Aligned_cols=157 Identities=17% Similarity=0.133 Sum_probs=92.9
Q ss_pred EEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcE
Q psy4818 491 IIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYI 570 (734)
Q Consensus 491 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 570 (734)
|+.+||-.++. ...|.+-+..-|... +.|-.++. ..-..++.+..++.-+.. +| +.+
T Consensus 1 v~IvhG~~~s~-~~HW~~wl~~~l~~~-~~V~~~~~------------------~~P~~~~W~~~l~~~i~~--~~-~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSP-PDHWQPWLERQLENS-VRVEQPDW------------------DNPDLDEWVQALDQAIDA--ID-EPT 57 (171)
T ss_dssp EEEE--TTSST-TTSTHHHHHHHHTTS-EEEEEC--------------------TS--HHHHHHHHHHCCHC---T-TTE
T ss_pred CEEeCCCCCCC-ccHHHHHHHHhCCCC-eEEecccc------------------CCCCHHHHHHHHHHHHhh--cC-CCe
Confidence 45667743333 356776666666654 66665553 112344555555444332 33 359
Q ss_pred EEEEcChHHHHHHHHH-hcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCc
Q psy4818 571 TIMGGSNGGLLVGACL-NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT 649 (734)
Q Consensus 571 ~i~G~S~GG~~~~~~~-~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~ 649 (734)
.++|||.|+.+++..+ .+....++++++.+|+-.-.... ...+. ..+.+..... .
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~-------~~~~~------------~~f~~~p~~~-----l 113 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP-------FPPEL------------DGFTPLPRDP-----L 113 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC-------CTCGG------------CCCTTSHCCH-----H
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc-------hhhhc------------cccccCcccc-----c
Confidence 9999999999999999 77777899999999985310000 00000 0111111111 3
Q ss_pred cCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch
Q psy4818 650 QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL 707 (734)
Q Consensus 650 ~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (734)
..| .+++.+++|+.||+..+.+++++|.. +++..+++||......
T Consensus 114 ~~~-~~viaS~nDp~vp~~~a~~~A~~l~a------------~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 114 PFP-SIVIASDNDPYVPFERAQRLAQRLGA------------ELIILGGGGHFNAASG 158 (171)
T ss_dssp HCC-EEEEEETTBSSS-HHHHHHHHHHHT-------------EEEEETS-TTSSGGGT
T ss_pred CCC-eEEEEcCCCCccCHHHHHHHHHHcCC------------CeEECCCCCCcccccC
Confidence 445 58899999999999999999999854 4788899999876543
No 179
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.65 E-value=3.3e-07 Score=84.98 Aligned_cols=236 Identities=15% Similarity=0.073 Sum_probs=131.3
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
..++..||..+++..+... ++.+-.+.+-|+++.. ..|-..+++.++++||.|+..||||.|+.-..-.....
T Consensus 8 ~~l~~~DG~~l~~~~~pA~-----~~~~g~~~va~a~Gv~--~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD-----GKASGRLVVAGATGVG--QYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccccccCC-----CCCCCcEEecccCCcc--hhHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 5577889999998877543 3444344445655543 34445577888899999999999997765432111111
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC--Ccchhccc-c------ccc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV--GALDMLRF-N------KFT 612 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~~~-~------~~~ 612 (734)
-........|+.++++++.+.. ....+..+|||+||.+...+. ++|..-.+.|..+ ++.-+... . ...
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeecccc-cCcccceeeEeccccccccchhhhhcccceeecc
Confidence 1122334578889999987742 223588999999999887665 4563222223222 21111100 0 000
Q ss_pred c----Ccccccc-----cCCCC-CH----HHHHHHHhCCccCC----------CCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 613 I----AYYSESE-----FGSPN-NK----THFHNLLSYSPLHN----------IKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 613 ~----~~~~~~~-----~g~~~-~~----~~~~~~~~~sp~~~----------~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
+ -..|... .|..+ .+ .+...+-+..-+.. +-. .+++| +..+....|+.+|+.
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~ya---aVrtP-i~~~~~~DD~w~P~A 233 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYA---AVRTP-ITFSRALDDPWAPPA 233 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHH---HhcCc-eeeeccCCCCcCCHH
Confidence 0 0012111 12221 11 11222222211111 001 26777 999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC----CCCCCCchHHhHHHHHHHHHHH
Q psy4818 669 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDA----GHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 669 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~~~~fl 721 (734)
...++.....++ |++++.++.+ ||...-... ..-.+.+++.||
T Consensus 234 s~d~f~~~y~nA---------pl~~~~~~~~~~~lGH~gyfR~~-~Ealwk~~L~w~ 280 (281)
T COG4757 234 SRDAFASFYRNA---------PLEMRDLPRAEGPLGHMGYFREP-FEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhhhcC---------cccceecCcccCcccchhhhccc-hHHHHHHHHHhh
Confidence 888888877755 7777777765 786431111 023344556665
No 180
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.65 E-value=1.8e-06 Score=95.88 Aligned_cols=172 Identities=11% Similarity=0.086 Sum_probs=104.2
Q ss_pred EEeeEEeCCCCcEEEEEEeC---CCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSK---SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~---~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.++++++||||+++||.... .++....||+.+.. |...+.+.+.. ...+.|||||+.|+|......-. ...
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~~-~t~PsWspDG~~lw~v~dg~~~~----~v~ 424 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGHS-LTRPSWSLDADAVWVVVDGNTVV----RVI 424 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCCC-CCCceECCCCCceEEEecCcceE----EEe
Confidence 46789999999999999842 12245799999974 43333333332 47899999999999987421100 000
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEE---EeCCCCCCCcccCCCCc
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHY---FDLHSLPDGKISGKFPL 296 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~---~d~~~~~~~~l~~~~~~ 296 (734)
......++|++.++++.... .. ..-+..+.|||||++|+|... .+||+ ...++|. ..|+ ..
T Consensus 425 ~~~~~gql~~~~vd~ge~~~----~~---~g~Issl~wSpDG~RiA~i~~-----g~v~Va~Vvr~~~G~-~~l~---~~ 488 (591)
T PRK13616 425 RDPATGQLARTPVDASAVAS----RV---PGPISELQLSRDGVRAAMIIG-----GKVYLAVVEQTEDGQ-YALT---NP 488 (591)
T ss_pred ccCCCceEEEEeccCchhhh----cc---CCCcCeEEECCCCCEEEEEEC-----CEEEEEEEEeCCCCc-eeec---cc
Confidence 01123478877777654321 11 112467899999999999872 37887 4544432 2231 22
Q ss_pred eeeeccccce-EE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 297 KTVIPGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 297 ~~l~~~~~~~-~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
+.+....... .. .|..++. |++.+. +....++.+++++..
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~-L~V~~~--~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDS-LVVGRS--DPEHPVWYVNLDGSN 530 (591)
T ss_pred EEeecccCCccccceEecCCE-EEEEec--CCCCceEEEecCCcc
Confidence 3343333221 22 3888766 666654 234569999998754
No 181
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.64 E-value=1.4e-07 Score=95.47 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=78.6
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHH-HHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRC-MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|++|++||..+... ..|...+. .++.+.++.|+++|+++++... +..+. ..-...-+++...+++|.++.
T Consensus 33 ~~~~p~vilIHG~~~~~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~--~~~~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGE-ESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV--NNTRVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCCCcEEEEcCCCCCCC-CcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 355789999999765442 23433333 3555568999999999853211 11110 001112346777888887765
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
..+.+++.++|||+||.+++.++.+.|++++.++...|..
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 5678899999999999999999999999889999877653
No 182
>KOG2096|consensus
Probab=98.63 E-value=3.6e-06 Score=81.27 Aligned_cols=266 Identities=15% Similarity=0.149 Sum_probs=132.8
Q ss_pred eCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-----cccccccccccCeeEEEcCCcEEEEE
Q psy4818 131 LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-----DYPEVLKNVKFPSISWTHDHKGFFYN 205 (734)
Q Consensus 131 ~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-----~~~~~~~~~~~~~~~wSpDg~~l~y~ 205 (734)
++.+.| +++...+..+.||.||++||-...+ ..|++|++..=+ .++...+-.....++|+||-+.|++.
T Consensus 77 l~~~~L-KgH~~~vt~~~FsSdGK~lat~~~D-----r~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~ 150 (420)
T KOG2096|consen 77 LNVSVL-KGHKKEVTDVAFSSDGKKLATISGD-----RSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVS 150 (420)
T ss_pred hhhhhh-hccCCceeeeEEcCCCceeEEEeCC-----ceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEE
Confidence 344455 3455668999999999999977642 479999987521 22222221123567888888887776
Q ss_pred EEecCC-------CCCCCCcc------c---ccCCcEEEEEECCCCC----------CCCeeEEecCC--------CCee
Q psy4818 206 QYCDIN-------GTADGTET------T---AHMGQKIYYHVLGTEQ----------DKDIPVVEFPN--------GRSL 251 (734)
Q Consensus 206 ~~~~~~-------~~~~~~~~------~---~~~~~~l~~~~l~t~~----------~~~~~v~~~~~--------~~~~ 251 (734)
-..+.. ..++|..+ | ..+-+++-.+++|+.. ..+++++.... +...
T Consensus 151 ~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~ 230 (420)
T KOG2096|consen 151 VKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSS 230 (420)
T ss_pred EccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeecccccc
Confidence 543211 01122211 1 1111233333333221 12334443321 1112
Q ss_pred EEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceE
Q psy4818 252 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKV 330 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l 330 (734)
....+.|||||+|+... ...++.+|..-=+....+++-...-.|..+...... .||++..+++-++.. + ..+|
T Consensus 231 n~~aavSP~GRFia~~g----FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD-G-~wri 304 (420)
T KOG2096|consen 231 NYDAAVSPDGRFIAVSG----FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD-G-KWRI 304 (420)
T ss_pred ccceeeCCCCcEEEEec----CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC-C-cEEE
Confidence 34678999999998542 335677776421122222221222223222222222 388888887766543 2 3456
Q ss_pred EEEecCCCCCCCceEeecC------CCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-CCceEEeec
Q psy4818 331 VTINLNNPCEKNWKTLIPE------DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITHIS 403 (734)
Q Consensus 331 ~~~d~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~-~~g~v~~~~ 403 (734)
+-.|+.=...+..+.|-.. .....+.-...+.++.+.++.. +.|.++..++|+....+.. ..+.|++++
T Consensus 305 wdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g----s~l~~~~se~g~~~~~~e~~h~~~Is~is 380 (420)
T KOG2096|consen 305 WDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG----SDLKVFASEDGKDYPELEDIHSTTISSIS 380 (420)
T ss_pred eeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC----CceEEEEcccCccchhHHHhhcCceeeEE
Confidence 5555431110011111111 0112222222344333433322 4588888888876544433 256788999
Q ss_pred cCcccceEE
Q psy4818 404 GRRKYNEVF 412 (734)
Q Consensus 404 ~~~d~~~l~ 412 (734)
++++|+.++
T Consensus 381 ~~~~g~~~a 389 (420)
T KOG2096|consen 381 YSSDGKYIA 389 (420)
T ss_pred ecCCCcEEe
Confidence 999886554
No 183
>PRK10115 protease 2; Provisional
Probab=98.62 E-value=3.8e-05 Score=87.94 Aligned_cols=260 Identities=10% Similarity=0.024 Sum_probs=147.8
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC-CceEEEEEE
Q psy4818 95 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG-SDWNTLHIK 173 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g-~~~~~l~v~ 173 (734)
.++++|.+++|....+|.+...|++++..+|. .|.+ .+.. .. ..++|++||+.|.|+....+ ....+||..
T Consensus 133 ~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~--~l~~--~i~~---~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 133 AITPDNTIMALAEDFLSRRQYGIRFRNLETGN--WYPE--LLDN---VE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EECCCCCEEEEEecCCCcEEEEEEEEECCCCC--CCCc--cccC---cc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 44689999999999988999999999876553 1211 1110 11 35899999999999987543 234789999
Q ss_pred ECCCCC--cccc-cccccccCeeEEEc-CCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCC
Q psy4818 174 DVDTGK--DYPE-VLKNVKFPSISWTH-DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR 249 (734)
Q Consensus 174 dl~~g~--~~~~-~~~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~ 249 (734)
++.++. .... ......+.-..|.+ |+++++...... ....+++++......+...+.....+.
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 271 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASA-------------TTSEVLLLDAELADAEPFVFLPRRKDH 271 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECC-------------ccccEEEEECcCCCCCceEEEECCCCC
Confidence 999983 1111 11111112234555 999887554322 223567666432222223333333223
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc-ceEEEEEecCCeEEEEeCCCCCCc
Q psy4818 250 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKG 328 (734)
Q Consensus 250 ~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~ 328 (734)
.+ .+ ...+..+++..+.+.....|..+++.+ + ..|..++.... .....+...++.|++..+.++ ..
T Consensus 272 ~~--~~--~~~~~~ly~~tn~~~~~~~l~~~~~~~-~-------~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g-~~ 338 (686)
T PRK10115 272 EY--SL--DHYQHRFYLRSNRHGKNFGLYRTRVRD-E-------QQWEELIPPRENIMLEGFTLFTDWLVVEERQRG-LT 338 (686)
T ss_pred EE--EE--EeCCCEEEEEEcCCCCCceEEEecCCC-c-------ccCeEEECCCCCCEEEEEEEECCEEEEEEEeCC-EE
Confidence 22 12 123466666665544557788888764 1 34666666532 233334445778888777654 55
Q ss_pred eEEEEecCCCCCCCceEeecCCCCceeEEEEE---eeCCEEEEEEEeC-CceeEEEEECCCCceeeeeC
Q psy4818 329 KVVTINLNNPCEKNWKTLIPEDENRTLDVVAA---VANNKLIVHYIQN-VRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 329 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~l~~~~~~~-~~~~l~~~dl~~g~~~~~l~ 393 (734)
+|+.+++.++. ...+.-..+.. ...... .+++.+++....- ....++.+|+.+++. +.++
T Consensus 339 ~l~~~~~~~~~---~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~-~~l~ 402 (686)
T PRK10115 339 SLRQINRKTRE---VIGIAFDDPAY-VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGER-RVLK 402 (686)
T ss_pred EEEEEcCCCCc---eEEecCCCCce-EeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcE-EEEE
Confidence 69999986543 34443122122 222222 2224566655543 346899999977653 4443
No 184
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.62 E-value=7.4e-05 Score=74.26 Aligned_cols=259 Identities=14% Similarity=0.156 Sum_probs=133.4
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 177 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~ 177 (734)
+++..+|-.-..+.+..-.-|..+..+|. -.+++...+..... -.+++++||++|.-+.-..| .|.|..+..
T Consensus 49 ~~~~~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p---~yvsvd~~g~~vf~AnY~~g----~v~v~p~~~ 120 (346)
T COG2706 49 PDQRHLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPP---CYVSVDEDGRFVFVANYHSG----SVSVYPLQA 120 (346)
T ss_pred CCCCEEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCC---eEEEECCCCCEEEEEEccCc----eEEEEEccc
Confidence 45556665555544444555666654444 33444333322222 45789999998876655443 577777743
Q ss_pred -CCcccc---c--ccc--------cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCee--
Q psy4818 178 -GKDYPE---V--LKN--------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP-- 241 (734)
Q Consensus 178 -g~~~~~---~--~~~--------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~-- 241 (734)
|..... . .+. .......++||++.|+.... ...+|+..++..+..+...
T Consensus 121 dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL---------------G~Dri~~y~~~dg~L~~~~~~ 185 (346)
T COG2706 121 DGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL---------------GTDRIFLYDLDDGKLTPADPA 185 (346)
T ss_pred CCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec---------------CCceEEEEEcccCcccccccc
Confidence 542110 0 011 01245688999998876653 1236777777654332211
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC--CCCCcccCCCCceeeeccccceEEE-EEecCCeEE
Q psy4818 242 VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS--LPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELI 318 (734)
Q Consensus 242 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~ 318 (734)
.+.....+ ..+.|+|+||++++.. +-+ +.|-++..+. ++-.+|+.-..++.-..+....... +++||+.||
T Consensus 186 ~v~~G~GP---RHi~FHpn~k~aY~v~-EL~--stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLY 259 (346)
T COG2706 186 EVKPGAGP---RHIVFHPNGKYAYLVN-ELN--STVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLY 259 (346)
T ss_pred ccCCCCCc---ceEEEcCCCcEEEEEe-ccC--CEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEE
Confidence 11222233 3578999999987654 222 4455554443 2211221101111111222222223 899988555
Q ss_pred EEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc-eeEEEEECCCCce
Q psy4818 319 VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR-SVMDLHDLNTGKR 388 (734)
Q Consensus 319 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~l~~~dl~~g~~ 388 (734)
.+|+....-.++.+|.+++... ....++. +......+.+..++.+++.+.+++. -.++..|.++|+.
T Consensus 260 -asNRg~dsI~~f~V~~~~g~L~-~~~~~~t-eg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L 327 (346)
T COG2706 260 -ASNRGHDSIAVFSVDPDGGKLE-LVGITPT-EGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRL 327 (346)
T ss_pred -EecCCCCeEEEEEEcCCCCEEE-EEEEecc-CCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceE
Confidence 6888665555666776665410 1111111 1232344555554555555655543 4677777778875
No 185
>KOG1446|consensus
Probab=98.61 E-value=0.0003 Score=68.49 Aligned_cols=245 Identities=14% Similarity=0.120 Sum_probs=142.5
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+.++.+|+||..|+-++.. ..|.++|..+|+.+.... ......-+.|......+.+.+.-
T Consensus 15 ~~i~sl~fs~~G~~litss~d-----Dsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk------------ 77 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSED-----DSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTK------------ 77 (311)
T ss_pred CceeEEEecCCCCEEEEecCC-----CeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCC------------
Confidence 447889999999999875432 379999999998654321 21112467788888888887752
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
....|.+..+-+.. -+..|. .+...+.++..||-+...+ ++ .....|++||+..... +-+.
T Consensus 78 --~d~tIryLsl~dNk--ylRYF~--GH~~~V~sL~~sP~~d~Fl-S~---S~D~tvrLWDlR~~~c---------qg~l 138 (311)
T KOG1446|consen 78 --EDDTIRYLSLHDNK--YLRYFP--GHKKRVNSLSVSPKDDTFL-SS---SLDKTVRLWDLRVKKC---------QGLL 138 (311)
T ss_pred --CCCceEEEEeecCc--eEEEcC--CCCceEEEEEecCCCCeEE-ec---ccCCeEEeeEecCCCC---------ceEE
Confidence 12367777776542 223333 3455677899999885433 32 2336899999986222 1122
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-CCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
.-.......++|.|-.++...+ . . .|-++|+..-.....+..... .+......+.+.++++.++....+ +.++
T Consensus 139 ~~~~~pi~AfDp~GLifA~~~~--~-~-~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~--s~~~ 212 (311)
T KOG1446|consen 139 NLSGRPIAAFDPEGLIFALANG--S-E-LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA--SFIY 212 (311)
T ss_pred ecCCCcceeECCCCcEEEEecC--C-C-eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC--CcEE
Confidence 2122223347787754443322 2 2 577788764222223333322 222333444454445444444433 5788
Q ss_pred EEECCCCceeeeeCCC--CceE-EeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy4818 380 LHDLNTGKRLHSFPLD--LGQI-THISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 437 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~--~g~v-~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~ 437 (734)
++|.-+|..+..+... .+.+ .+.+++||++ +++..++. +.+..|++ +++
T Consensus 213 ~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~-Fvl~gs~d---g~i~vw~~-----~tg 264 (311)
T KOG1446|consen 213 LLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK-FVLSGSDD---GTIHVWNL-----ETG 264 (311)
T ss_pred EEEccCCcEeeeEeeccCCCCcceeEEECCCCc-EEEEecCC---CcEEEEEc-----CCC
Confidence 8888889876666544 2211 2456778885 44444443 47999999 566
No 186
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.58 E-value=1.8e-05 Score=83.52 Aligned_cols=215 Identities=16% Similarity=0.206 Sum_probs=105.3
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC-CCcccc--cc------------cccccCeeEEEcCCcEEEEEEEec
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPE--VL------------KNVKFPSISWTHDHKGFFYNQYCD 209 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~-g~~~~~--~~------------~~~~~~~~~wSpDg~~l~y~~~~~ 209 (734)
-.++++|||++|+.+-..+| .+.++++.. |..... .. .......+.++|||+.++....
T Consensus 90 ~~i~~~~~g~~l~vany~~g----~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl-- 163 (345)
T PF10282_consen 90 CHIAVDPDGRFLYVANYGGG----SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL-- 163 (345)
T ss_dssp EEEEECTTSSEEEEEETTTT----EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET--
T ss_pred EEEEEecCCCEEEEEEccCC----eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec--
Confidence 35889999998876654443 477777765 442111 00 1112246899999998865432
Q ss_pred CCCCCCCCcccccCCcEEEEEECCCCCCC--CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 210 INGTADGTETTAHMGQKIYYHVLGTEQDK--DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~l~t~~~~--~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
...+|++++++....+ .......+... --..+.|+|||+++++.. + ..+.|.++++.. ..
T Consensus 164 -------------G~D~v~~~~~~~~~~~l~~~~~~~~~~G~-GPRh~~f~pdg~~~Yv~~-e--~s~~v~v~~~~~-~~ 225 (345)
T PF10282_consen 164 -------------GADRVYVYDIDDDTGKLTPVDSIKVPPGS-GPRHLAFSPDGKYAYVVN-E--LSNTVSVFDYDP-SD 225 (345)
T ss_dssp -------------TTTEEEEEEE-TTS-TEEEEEEEECSTTS-SEEEEEE-TTSSEEEEEE-T--TTTEEEEEEEET-TT
T ss_pred -------------CCCEEEEEEEeCCCceEEEeeccccccCC-CCcEEEEcCCcCEEEEec-C--CCCcEEEEeecc-cC
Confidence 2237888888765422 11111222222 124689999999987754 2 225677777663 11
Q ss_pred CcccCCCCceeeecccc---ceEE-EEEecCCeEEEEeCCCCCCceEEEEec--CCCCCCCceEeecCCCCceeEEEEEe
Q psy4818 288 GKISGKFPLKTVIPGMD---HHHE-IIANNGPELIVKTTKNAPKGKVVTINL--NNPCEKNWKTLIPEDENRTLDVVAAV 361 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~---~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~--~~~~~~~~~~l~~~~~~~~~~~~~~~ 361 (734)
..++.......+-.+.. .... .++|||+.||+ +|+... .|..+++ +++..... ..++-. ......+.+.
T Consensus 226 g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyv-snr~~~--sI~vf~~d~~~g~l~~~-~~~~~~-G~~Pr~~~~s 300 (345)
T PF10282_consen 226 GSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYV-SNRGSN--SISVFDLDPATGTLTLV-QTVPTG-GKFPRHFAFS 300 (345)
T ss_dssp TEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEE-EECTTT--EEEEEEECTTTTTEEEE-EEEEES-SSSEEEEEE-
T ss_pred CceeEEEEeeeccccccccCCceeEEEecCCCEEEE-EeccCC--EEEEEEEecCCCceEEE-EEEeCC-CCCccEEEEe
Confidence 12211000011111111 1222 38999987665 666533 3666665 33431111 222222 2223445444
Q ss_pred -eCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 362 -ANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 362 -~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
+++.+++.....+.-.++.+|.++|+.
T Consensus 301 ~~g~~l~Va~~~s~~v~vf~~d~~tG~l 328 (345)
T PF10282_consen 301 PDGRYLYVANQDSNTVSVFDIDPDTGKL 328 (345)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence 434555544333333555666677764
No 187
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.58 E-value=5.8e-06 Score=72.02 Aligned_cols=169 Identities=14% Similarity=0.101 Sum_probs=99.5
Q ss_pred CCCc-EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc-cccCCCchhH-HHHHHHHHHHc
Q psy4818 486 RRNP-VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR-LLKKQNCFDD-FQAAAEYMINK 562 (734)
Q Consensus 486 ~~~P-~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~-~~~~~~~~~D-~~~~~~~l~~~ 562 (734)
++.| +||+.||...+..++... ..+..|+++|+.|+.+++.- =..-....+ ...+....++ .+.++-.|...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~-~~a~~la~~G~~vaRfefpY----ma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~ 85 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMT-AVAAALARRGWLVARFEFPY----MAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG 85 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHH-HHHHHHHhCceeEEEeecch----hhhccccCCCCcCccccCCHHHHHHHHHHHhc
Confidence 3444 778899986555554433 45567788899999998752 100000000 1122233333 44555556544
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc-CCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCC
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL-VGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 641 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 641 (734)
.+...++|.|+||||-++.+++..---.+.+.+|. +||.- =|.|+. .. ..+
T Consensus 86 --l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp----------------pGKPe~---~R-------t~H 137 (213)
T COG3571 86 --LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP----------------PGKPEQ---LR-------TEH 137 (213)
T ss_pred --ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC----------------CCCccc---ch-------hhh
Confidence 45567999999999999998875311113444432 33220 133322 11 133
Q ss_pred CCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 642 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 642 ~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
+.. +++| +||+||+.|..-...+. +... . ..+++++...++.|-..
T Consensus 138 L~g----l~tP-tli~qGtrD~fGtr~~V---a~y~--l-------s~~iev~wl~~adHDLk 183 (213)
T COG3571 138 LTG----LKTP-TLITQGTRDEFGTRDEV---AGYA--L-------SDPIEVVWLEDADHDLK 183 (213)
T ss_pred ccC----CCCC-eEEeecccccccCHHHH---Hhhh--c-------CCceEEEEeccCccccc
Confidence 333 7788 99999999987666554 2211 2 56899999999999765
No 188
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.57 E-value=6e-05 Score=75.51 Aligned_cols=229 Identities=15% Similarity=0.119 Sum_probs=131.5
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEE-cCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWT-HDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wS-pDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
.++.|.+....|.|+--.. ..|+.++..+++........ ..+.... +| ..|+.+...
T Consensus 3 Egp~~d~~~g~l~~~D~~~----~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~-g~l~v~~~~--------------- 60 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPG----GRIYRVDPDTGEVEVIDLPG--PNGMAFDRPD-GRLYVADSG--------------- 60 (246)
T ss_dssp EEEEEETTTTEEEEEETTT----TEEEEEETTTTEEEEEESSS--EEEEEEECTT-SEEEEEETT---------------
T ss_pred cceEEECCCCEEEEEEcCC----CEEEEEECCCCeEEEEecCC--CceEEEEccC-CEEEEEEcC---------------
Confidence 3688999666666654333 37999999998754322222 2466777 56 456655421
Q ss_pred CcEEEEEECCCCCCCCeeEEecC--C-CCeeEEEEEEecCCcEEEEEEecCCCC-----ceEEEEeCCCCCCCcccCCCC
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFP--N-GRSLGLHSEVTDCGRYLLVSTSNNTQG-----SDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~--~-~~~~~~~~~~SpDG~~l~~~~~~~~~~-----~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.+.+.++.++..+ .+.... . ......++.++|||+ |+++....... ..||.++.+. .
T Consensus 61 --~~~~~d~~~g~~~--~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~-~--------- 125 (246)
T PF08450_consen 61 --GIAVVDPDTGKVT--VLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG-K--------- 125 (246)
T ss_dssp --CEEEEETTTTEEE--EEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS-E---------
T ss_pred --ceEEEecCCCcEE--EEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCCC-e---------
Confidence 2444476665322 233321 1 233556789999999 66665432221 4699998874 1
Q ss_pred ceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCC--CCceEeecCCCC-ceeEEEEEeeCCEEEEEEE
Q psy4818 296 LKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE--KNWKTLIPEDEN-RTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 296 ~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~ 371 (734)
...+..+...... .|+||++.||+.... ..+|++++++.... ...+.+...... ....++.+..++.|+++..
T Consensus 126 ~~~~~~~~~~pNGi~~s~dg~~lyv~ds~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~ 202 (246)
T PF08450_consen 126 VTVVADGLGFPNGIAFSPDGKTLYVADSF---NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW 202 (246)
T ss_dssp EEEEEEEESSEEEEEEETTSSEEEEEETT---TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE
T ss_pred EEEEecCcccccceEECCcchheeecccc---cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc
Confidence 2333333332223 399999988875432 45799999864321 111222222211 2356676666677777654
Q ss_pred eCCceeEEEEECCCCceeeeeCCCCceEEeecc-CcccceEEEEEe
Q psy4818 372 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFT 416 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~-~~d~~~l~~~~s 416 (734)
+...|++++. +|+.+..+..+...++++++ -++.++|+++.+
T Consensus 203 --~~~~I~~~~p-~G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 203 --GGGRIVVFDP-DGKLLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp --TTTEEEEEET-TSCEEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred --CCCEEEEECC-CccEEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 3368999999 59988888877335556665 356778887654
No 189
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.56 E-value=3.9e-07 Score=86.33 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=95.6
Q ss_pred CCCCCceEEEEEEEcC----CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecc
Q psy4818 452 FEPTLFQTKQVYFRSK----DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR 527 (734)
Q Consensus 452 ~~~~~~~~~~~~~~s~----dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r 527 (734)
|....|..+.+.+.+. ---..|..|+.|.. .+.+|+|++.||..-. .+|-...++.++..||+|++|+.-
T Consensus 9 F~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~---~G~yPVilF~HG~~l~---ns~Ys~lL~HIASHGfIVVAPQl~ 82 (307)
T PF07224_consen 9 FETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSE---AGTYPVILFLHGFNLY---NSFYSQLLAHIASHGFIVVAPQLY 82 (307)
T ss_pred eecCCceeEEEeecCCCCCCCCCCCCeEEecCCc---CCCccEEEEeechhhh---hHHHHHHHHHHhhcCeEEEechhh
Confidence 4555666666666321 22457899999976 6899999999996443 233334556678889999999975
Q ss_pred cCCCCCchhhhccccccCCCchhHHHHHHHHHHHc--------CCCCCCcEEEEEcChHHHHHHHHHhcC-CC-ceeEEE
Q psy4818 528 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK--------KYTKPKYITIMGGSNGGLLVGACLNQR-PE-LYGAAL 597 (734)
Q Consensus 528 G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~-~~~a~v 597 (734)
... ...+..++++...+++||-+. -..+.++++++|||.||-.+.+++..+ .+ .|.+.|
T Consensus 83 ~~~-----------~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLI 151 (307)
T PF07224_consen 83 TLF-----------PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALI 151 (307)
T ss_pred ccc-----------CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhhee
Confidence 421 123445678888899998653 125778999999999999999998755 23 377777
Q ss_pred EcCCcch
Q psy4818 598 ILVGALD 604 (734)
Q Consensus 598 ~~~~~~d 604 (734)
..-|+.-
T Consensus 152 GiDPV~G 158 (307)
T PF07224_consen 152 GIDPVAG 158 (307)
T ss_pred cccccCC
Confidence 7777653
No 190
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.55 E-value=0.00029 Score=70.11 Aligned_cols=270 Identities=15% Similarity=0.111 Sum_probs=135.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc---ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP---EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~---~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.+.++|+|++++|.-....+....-.-|-+|-.+|+... ....+...-.++.++||+.|+-.....
T Consensus 42 ptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~----------- 110 (346)
T COG2706 42 PTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS----------- 110 (346)
T ss_pred CceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC-----------
Confidence 456899999997755544322222345666666676311 112221124678899998666554321
Q ss_pred ccCCcEEEEEECCCCCC-C---CeeEEecC--C---CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 221 AHMGQKIYYHVLGTEQD-K---DIPVVEFP--N---GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~-~---~~~v~~~~--~---~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
..|.+..+..... . ++....+. . +........++|||++|+...- ...+|++++++.|. |+
T Consensus 111 ----g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL---G~Dri~~y~~~dg~---L~ 180 (346)
T COG2706 111 ----GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL---GTDRIFLYDLDDGK---LT 180 (346)
T ss_pred ----ceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec---CCceEEEEEcccCc---cc
Confidence 1333333322110 0 00001110 0 0112345789999999986432 22588999988643 22
Q ss_pred CCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE--eecCC--CCceeEEEEEeeCCEEE
Q psy4818 292 GKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT--LIPED--ENRTLDVVAAVANNKLI 367 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~--~~~~~~~~~~~~~~~l~ 367 (734)
...+ -.+..+.....-.|.|+|+..|+++..++ .-.++.++-..++.+.++. .+|.+ .......+.+..+++++
T Consensus 181 ~~~~-~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL 258 (346)
T COG2706 181 PADP-AEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL 258 (346)
T ss_pred cccc-cccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEE
Confidence 1111 11233444445569999998888776643 2234444443344222222 22222 01122334444445555
Q ss_pred EEEEeCCc-eeEEEEECCCCceeeeeCC--CCce-EEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeE
Q psy4818 368 VHYIQNVR-SVMDLHDLNTGKRLHSFPL--DLGQ-ITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTI 443 (734)
Q Consensus 368 ~~~~~~~~-~~l~~~dl~~g~~~~~l~~--~~g~-v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~ 443 (734)
+..++... -.++.+|..+|+. ..+.. ..|. -..+.+++.++.|+.+.+...+ -.+|..|- ++| .+++
T Consensus 259 YasNRg~dsI~~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~-i~vf~~d~-----~TG--~L~~ 329 (346)
T COG2706 259 YASNRGHDSIAVFSVDPDGGKL-ELVGITPTEGQFPRDFNINPSGRFLIAANQKSDN-ITVFERDK-----ETG--RLTL 329 (346)
T ss_pred EEecCCCCeEEEEEEcCCCCEE-EEEEEeccCCcCCccceeCCCCCEEEEEccCCCc-EEEEEEcC-----CCc--eEEe
Confidence 54544332 2455556655653 33221 1233 2456677777777666555443 56788887 677 5554
Q ss_pred Ee
Q psy4818 444 FR 445 (734)
Q Consensus 444 ~~ 445 (734)
+.
T Consensus 330 ~~ 331 (346)
T COG2706 330 LG 331 (346)
T ss_pred cc
Confidence 43
No 191
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.55 E-value=9.1e-07 Score=90.62 Aligned_cols=206 Identities=18% Similarity=0.268 Sum_probs=117.9
Q ss_pred EEEEE-eccccCCCCCcEEEEecCCC-CCcCCccc---cHHHHHHHHhcCeEEEEEecccCC--CCCchhhhccccccCC
Q psy4818 474 MYIIH-RVGALRNRRNPVIIYGYGGY-GVSVLPTF---SISRCMFLRHFNGIYAIPNIRGGG--ELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 474 ~~~~~-p~~~~~~~~~P~vv~~hGg~-~~~~~~~~---~~~~~~~l~~~G~~v~~~~~rG~~--~~g~~~~~~~~~~~~~ 546 (734)
.|++. |.+.++ +.-|+|||+|||. .....+.. ...+..+|. ..++++.||.... +.| ..-.
T Consensus 108 ~Wlvk~P~~~~p-k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~---------~~yP 175 (374)
T PF10340_consen 108 YWLVKAPNRFKP-KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHG---------HKYP 175 (374)
T ss_pred EEEEeCCcccCC-CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCC---------CcCc
Confidence 56666 655432 3459999999982 22333321 112334454 4689999998643 222 2233
Q ss_pred CchhHHHHHHHHHH-HcCCCCCCcEEEEEcChHHHHHHHHHhc--C--C-CceeEEEEcCCcchhcccccccc-------
Q psy4818 547 NCFDDFQAAAEYMI-NKKYTKPKYITIMGGSNGGLLVGACLNQ--R--P-ELYGAALILVGALDMLRFNKFTI------- 613 (734)
Q Consensus 547 ~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~~~~~~~~~--~--p-~~~~a~v~~~~~~d~~~~~~~~~------- 613 (734)
..+.++++..++|+ +.|. +.|.++|-||||.|++.++.. . + -.-+.+|+.+|.+++........
T Consensus 176 tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~ 252 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNE 252 (374)
T ss_pred hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccc
Confidence 45679999999999 5554 679999999999999988642 1 1 12479999999988762111000
Q ss_pred -----Cc----cccccc-CCCCCHHHHHHHHhCCccCCCCCCCC-----C--ccCCcEEEEecCCCCCCCChHHHHHHHH
Q psy4818 614 -----AY----YSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPN-----N--TQYPATLVLTGDHDDRVPPLHSYKFIAT 676 (734)
Q Consensus 614 -----~~----~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~-----~--~~~P~~Li~~g~~D~~v~~~~~~~~~~~ 676 (734)
.. .|...| |+ .+++. .....|+.++..+-+ . -++ .++|+.|+++ |-..+.++|+++
T Consensus 253 ~~D~l~~~~~~~~~~~y~~~-~~~~~---~~~~~~~~n~~~n~d~~~W~~I~~~~-~vfVi~Ge~E--vfrddI~~~~~~ 325 (374)
T PF10340_consen 253 KRDMLSYKGLSMFGDAYIGN-NDPEN---DLNSLPFVNIEYNFDAEDWKDILKKY-SVFVIYGEDE--VFRDDILEWAKK 325 (374)
T ss_pred cccccchhhHHHHHHhhccc-ccccc---ccccCCccCcccCCChhHHHHhccCC-cEEEEECCcc--ccHHHHHHHHHH
Confidence 00 000011 11 00000 011222222211000 0 112 3999999865 567899999999
Q ss_pred HHhhhCCCCCCCCcEEEEEeCCCCCCC
Q psy4818 677 LQEKIGSLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 677 L~~~~~~~~~~~~~~~~~~~~~~gH~~ 703 (734)
+...... +. +.+....+.+++.|..
T Consensus 326 ~~~~~~~-~~-~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 326 LNDVKPN-KF-SNSNNVYIDEGGIHIG 350 (374)
T ss_pred HhhcCcc-cc-CCcceEEEecCCcccc
Confidence 9866110 00 3356777889999965
No 192
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.54 E-value=4.1e-05 Score=90.43 Aligned_cols=236 Identities=14% Similarity=0.170 Sum_probs=131.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC----Ccc--c--ccccccccCeeEEEcC-CcEEEEEEEecCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG----KDY--P--EVLKNVKFPSISWTHD-HKGFFYNQYCDING 212 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g----~~~--~--~~~~~~~~~~~~wSpD-g~~l~y~~~~~~~~ 212 (734)
..+..++|||||++||-+. ....|++||+.+. ... + ..........+.|+|. ++.|+....+
T Consensus 484 ~~V~~i~fs~dg~~latgg-----~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~D---- 554 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAG-----VNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFE---- 554 (793)
T ss_pred CcEEEEEECCCCCEEEEEe-----CCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCC----
Confidence 4477899999999988544 2347999997642 110 0 0111223467899886 4555444432
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
..|.+|++.+++ .+..+. .+...+..+.|+| ||.+|+-. .....|.+||+.++.
T Consensus 555 ------------g~v~lWd~~~~~--~~~~~~--~H~~~V~~l~~~p~~~~~L~Sg----s~Dg~v~iWd~~~~~----- 609 (793)
T PLN00181 555 ------------GVVQVWDVARSQ--LVTEMK--EHEKRVWSIDYSSADPTLLASG----SDDGSVKLWSINQGV----- 609 (793)
T ss_pred ------------CeEEEEECCCCe--EEEEec--CCCCCEEEEEEcCCCCCEEEEE----cCCCEEEEEECCCCc-----
Confidence 268889987653 122222 3344567899997 67776632 223679999998721
Q ss_pred CCCCceeeeccccceEEE-EE-ecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEE
Q psy4818 292 GKFPLKTVIPGMDHHHEI-IA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~-~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 369 (734)
....+. ........ |. ++|..|+..+. ++.|+.||+.+... ....+..+ ...+..+.+.+ +..+++
T Consensus 610 ---~~~~~~-~~~~v~~v~~~~~~g~~latgs~----dg~I~iwD~~~~~~-~~~~~~~h--~~~V~~v~f~~-~~~lvs 677 (793)
T PLN00181 610 ---SIGTIK-TKANICCVQFPSESGRSLAFGSA----DHKVYYYDLRNPKL-PLCTMIGH--SKTVSYVRFVD-SSTLVS 677 (793)
T ss_pred ---EEEEEe-cCCCeEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCCc-cceEecCC--CCCEEEEEEeC-CCEEEE
Confidence 111221 11222222 54 45666554332 34699999875431 12233322 23455565555 445555
Q ss_pred EEeCCceeEEEEECCCC------ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 370 YIQNVRSVMDLHDLNTG------KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g------~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+ ..|.+||+..+ +.+..+......+..+.+++++. ++++.+.. ..+++|+.
T Consensus 678 ~s~D--~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~-~lasgs~D---~~v~iw~~ 737 (793)
T PLN00181 678 SSTD--NTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDG-YIATGSET---NEVFVYHK 737 (793)
T ss_pred EECC--CEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCC-EEEEEeCC---CEEEEEEC
Confidence 5555 46889998532 33455554444455566777765 33333322 36888887
No 193
>KOG0315|consensus
Probab=98.54 E-value=4.8e-05 Score=71.31 Aligned_cols=217 Identities=15% Similarity=0.161 Sum_probs=135.7
Q ss_pred EEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecC
Q psy4818 168 NTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 246 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~ 246 (734)
.+|++|.+.||....... ....+..+..+||++.|+.... +.|.++++.+.....+..|+..
T Consensus 20 hTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----------------qhvRlyD~~S~np~Pv~t~e~h 82 (311)
T KOG0315|consen 20 HTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----------------QHVRLYDLNSNNPNPVATFEGH 82 (311)
T ss_pred ceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----------------CeeEEEEccCCCCCceeEEecc
Confidence 689999999998644221 2223467889999998876553 3688889998877666777764
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCC
Q psy4818 247 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNA 325 (734)
Q Consensus 247 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~ 325 (734)
...+..+.|--||+|++- +++...+.+||+.... ..+..........+ ..|+...| |.++.
T Consensus 83 --~kNVtaVgF~~dgrWMyT----gseDgt~kIWdlR~~~---------~qR~~~~~spVn~vvlhpnQteL-is~dq-- 144 (311)
T KOG0315|consen 83 --TKNVTAVGFQCDGRWMYT----GSEDGTVKIWDLRSLS---------CQRNYQHNSPVNTVVLHPNQTEL-ISGDQ-- 144 (311)
T ss_pred --CCceEEEEEeecCeEEEe----cCCCceEEEEeccCcc---------cchhccCCCCcceEEecCCcceE-EeecC--
Confidence 235678899999999972 2334678889987721 12222221222223 44554444 44444
Q ss_pred CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCcee------eeeCCCCceE
Q psy4818 326 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL------HSFPLDLGQI 399 (734)
Q Consensus 326 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~------~~l~~~~g~v 399 (734)
++.|.+||+..... -.+++|+. ...++......++..++..+.. ...|+|++-++... .++....+.+
T Consensus 145 -sg~irvWDl~~~~c--~~~liPe~-~~~i~sl~v~~dgsml~a~nnk--G~cyvW~l~~~~~~s~l~P~~k~~ah~~~i 218 (311)
T KOG0315|consen 145 -SGNIRVWDLGENSC--THELIPED-DTSIQSLTVMPDGSMLAAANNK--GNCYVWRLLNHQTASELEPVHKFQAHNGHI 218 (311)
T ss_pred -CCcEEEEEccCCcc--ccccCCCC-CcceeeEEEcCCCcEEEEecCC--ccEEEEEccCCCccccceEhhheecccceE
Confidence 34699999975431 35677776 5666766665445555555433 57999998554322 2233335666
Q ss_pred EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 400 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..--.|||++.++ ++++.. ++++++.
T Consensus 219 l~C~lSPd~k~la-t~ssdk---tv~iwn~ 244 (311)
T KOG0315|consen 219 LRCLLSPDVKYLA-TCSSDK---TVKIWNT 244 (311)
T ss_pred EEEEECCCCcEEE-eecCCc---eEEEEec
Confidence 5666788886554 455543 6888887
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.54 E-value=1.9e-06 Score=83.31 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=79.8
Q ss_pred EEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCe-EEEEEeccc---------CC
Q psy4818 462 VYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG-IYAIPNIRG---------GG 530 (734)
Q Consensus 462 ~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~-~v~~~~~rG---------~~ 530 (734)
..+.|. .|++-.+++..|+++.++.++|||.+.-|. .. .+.....+...+++.=. ..+...|+. ..
T Consensus 12 ~~l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn-~v--f~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~ 88 (264)
T COG2819 12 RDLKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGN-AV--FNALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAY 88 (264)
T ss_pred EeeeecCCCcEEEEEecCCCCCCCCCCCcEEEEecch-hh--hchHHHHhhhhhhcCCCceEEEeccccccccccccccc
Confidence 334444 456778999999998777779886655443 21 11111122333433211 122222222 11
Q ss_pred CCCchh----hh---cc-cc-ccCCCchhHHH-HHHHHHHHcC-CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 531 ELGEDW----HN---AG-RL-LKKQNCFDDFQ-AAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 531 ~~g~~~----~~---~~-~~-~~~~~~~~D~~-~~~~~l~~~~-~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
.|-..- .. .+ .. ..+...|.+|+ .-++=++++. -++++|.+|+|||+||++++.++..+|+.|...++.
T Consensus 89 DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~ 168 (264)
T COG2819 89 DYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLI 168 (264)
T ss_pred cCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeee
Confidence 111100 00 00 11 11223344443 4555555654 489999999999999999999999999999999999
Q ss_pred CCcc
Q psy4818 600 VGAL 603 (734)
Q Consensus 600 ~~~~ 603 (734)
+|-.
T Consensus 169 SPSl 172 (264)
T COG2819 169 SPSL 172 (264)
T ss_pred cchh
Confidence 9855
No 195
>KOG0263|consensus
Probab=98.54 E-value=6.6e-06 Score=88.88 Aligned_cols=193 Identities=12% Similarity=0.114 Sum_probs=122.6
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
+.+..||||.+.|+-++.|. .+++|.+++.. -+.++.....|.| .+.|+|-|-|.+-.
T Consensus 454 Vyg~sFsPd~rfLlScSED~----------------svRLWsl~t~s--~~V~y~GH~~PVw--dV~F~P~GyYFata-- 511 (707)
T KOG0263|consen 454 VYGCSFSPDRRFLLSCSEDS----------------SVRLWSLDTWS--CLVIYKGHLAPVW--DVQFAPRGYYFATA-- 511 (707)
T ss_pred eeeeeecccccceeeccCCc----------------ceeeeecccce--eEEEecCCCccee--eEEecCCceEEEec--
Confidence 35678999999887766433 57778887753 4456665555544 56789999876632
Q ss_pred cCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-E-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee
Q psy4818 270 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-I-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 347 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 347 (734)
++....++|-.|-.. +.+ ++.+...+.. + |.|+..+++ +. +.+..+-.||+.++. ..+++
T Consensus 512 s~D~tArLWs~d~~~----------PlR-ifaghlsDV~cv~FHPNs~Y~a--TG--SsD~tVRlWDv~~G~---~VRiF 573 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNK----------PLR-IFAGHLSDVDCVSFHPNSNYVA--TG--SSDRTVRLWDVSTGN---SVRIF 573 (707)
T ss_pred CCCceeeeeecccCC----------chh-hhcccccccceEEECCcccccc--cC--CCCceEEEEEcCCCc---EEEEe
Confidence 222224566555422 333 3333333333 3 888876444 22 334568889998876 35666
Q ss_pred cCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 348 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
.+. ...+..+.+...++.+++...+ ..|.+||+.+|+.+..+....+.+.+++++.|+..++ +.+..+ .+..|
T Consensus 574 ~GH-~~~V~al~~Sp~Gr~LaSg~ed--~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLa-sgg~Dn---sV~lW 646 (707)
T KOG0263|consen 574 TGH-KGPVTALAFSPCGRYLASGDED--GLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLA-SGGADN---SVRLW 646 (707)
T ss_pred cCC-CCceEEEEEcCCCceEeecccC--CcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEE-ecCCCC---eEEEE
Confidence 654 4555666555546666666555 5799999998887777766678888999999886554 433333 56777
Q ss_pred eC
Q psy4818 428 NI 429 (734)
Q Consensus 428 d~ 429 (734)
|+
T Consensus 647 D~ 648 (707)
T KOG0263|consen 647 DL 648 (707)
T ss_pred Ec
Confidence 87
No 196
>KOG0286|consensus
Probab=98.54 E-value=6.7e-05 Score=72.00 Aligned_cols=199 Identities=9% Similarity=0.079 Sum_probs=120.9
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
+..+.|++|+|.|+-.+.+. ++-+|+.-|..... .+. -...|++..++||.|++++--
T Consensus 58 i~~~~ws~Dsr~ivSaSqDG----------------klIvWDs~TtnK~h--aip--l~s~WVMtCA~sPSg~~VAcG-- 115 (343)
T KOG0286|consen 58 IYAMDWSTDSRRIVSASQDG----------------KLIVWDSFTTNKVH--AIP--LPSSWVMTCAYSPSGNFVACG-- 115 (343)
T ss_pred eeeeEecCCcCeEEeeccCC----------------eEEEEEccccccee--EEe--cCceeEEEEEECCCCCeEEec--
Confidence 36889999999998887654 68888887765432 222 235699999999999999852
Q ss_pred cCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee
Q psy4818 270 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 347 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 347 (734)
+-.+..-++++.+..... ..+..+.+.+...-.. .|..|++ |+ + ..++.....||++++. ....+
T Consensus 116 --GLdN~Csiy~ls~~d~~g---~~~v~r~l~gHtgylScC~f~dD~~-il--T--~SGD~TCalWDie~g~---~~~~f 182 (343)
T KOG0286|consen 116 --GLDNKCSIYPLSTRDAEG---NVRVSRELAGHTGYLSCCRFLDDNH-IL--T--GSGDMTCALWDIETGQ---QTQVF 182 (343)
T ss_pred --CcCceeEEEecccccccc---cceeeeeecCccceeEEEEEcCCCc-eE--e--cCCCceEEEEEcccce---EEEEe
Confidence 223566677776521111 0112222222221111 1555544 43 2 2235679999999876 23344
Q ss_pred cCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 348 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
.+...+++.-...+.+...+++..-+ ...++||+.+|...+.+......|.++.+.|++..+ ...|.. .....|
T Consensus 183 ~GH~gDV~slsl~p~~~ntFvSg~cD--~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~af--atGSDD--~tcRly 256 (343)
T KOG0286|consen 183 HGHTGDVMSLSLSPSDGNTFVSGGCD--KSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAF--ATGSDD--ATCRLY 256 (343)
T ss_pred cCCcccEEEEecCCCCCCeEEecccc--cceeeeeccCcceeEeecccccccceEEEccCCCee--eecCCC--ceeEEE
Confidence 44334554333233235566665544 467889998898888888877788888888988433 333332 346677
Q ss_pred eC
Q psy4818 428 NI 429 (734)
Q Consensus 428 d~ 429 (734)
|+
T Consensus 257 Dl 258 (343)
T KOG0286|consen 257 DL 258 (343)
T ss_pred ee
Confidence 77
No 197
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.53 E-value=1.4e-06 Score=85.33 Aligned_cols=206 Identities=17% Similarity=0.133 Sum_probs=119.2
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHh---cCeEEEEEecccCCCCCchh
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH---FNGIYAIPNIRGGGELGEDW 536 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~rG~~~~g~~~ 536 (734)
+.+.+.+.=..+....++.|.++.+..++|++++.||-......+-. ..+-.++++ ..-+++.+++=---.....+
T Consensus 70 ~~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~ 148 (299)
T COG2382 70 EEILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKKRREEL 148 (299)
T ss_pred hhhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHh
Confidence 34444443224567888899998888999999999986444433221 122233332 13566766642111001111
Q ss_pred hhccccccCCCchhHHHH--HHHHHHHcC--CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc
Q psy4818 537 HNAGRLLKKQNCFDDFQA--AAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 612 (734)
Q Consensus 537 ~~~~~~~~~~~~~~D~~~--~~~~l~~~~--~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 612 (734)
+ .-..+.++++ .+-++.+.. .-++++-+++|-|+||+.+++++.++|+.|..+++++|.+++.--...
T Consensus 149 ~-------~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~- 220 (299)
T COG2382 149 H-------CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQ- 220 (299)
T ss_pred c-------ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccc-
Confidence 1 1111222211 233333332 246778899999999999999999999999999999998865321110
Q ss_pred cCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 613 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 613 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
.++ +....+. -++-+... .. -++...++.+...++ .+.+++.|+.. +.+..
T Consensus 221 ------~~~------~~~~~l~---~~~a~~~~----~~-~~l~~g~~~~~~~~p--Nr~L~~~L~~~-------g~~~~ 271 (299)
T COG2382 221 ------PQG------EVAESLK---ILHAIGTD----ER-IVLTTGGEEGDFLRP--NRALAAQLEKK-------GIPYY 271 (299)
T ss_pred ------ccc------chhhhhh---hhhccCcc----ce-EEeecCCccccccch--hHHHHHHHHhc-------CCcce
Confidence 000 1111111 12222221 11 155555555555444 56788999888 99999
Q ss_pred EEEeCCCCCCCC
Q psy4818 693 LRVEQDAGHGQG 704 (734)
Q Consensus 693 ~~~~~~~gH~~~ 704 (734)
+..|+| ||-..
T Consensus 272 yre~~G-gHdw~ 282 (299)
T COG2382 272 YREYPG-GHDWA 282 (299)
T ss_pred eeecCC-CCchh
Confidence 999998 99764
No 198
>KOG0296|consensus
Probab=98.53 E-value=0.00011 Score=72.80 Aligned_cols=243 Identities=12% Similarity=0.133 Sum_probs=138.4
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
++.-++....||-||.+|| .|+-...|.|+..++|.........+ ...-+.|.|-+..|++...+.
T Consensus 104 gHKDSVt~~~FshdgtlLA-----TGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DG-------- 170 (399)
T KOG0296|consen 104 GHKDSVTCCSFSHDGTLLA-----TGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDG-------- 170 (399)
T ss_pred CCCCceEEEEEccCceEEE-----ecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCC--------
Confidence 4556799999999999999 34444679999999987532221111 223568899887777666543
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc-cc--CCC
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-IS--GKF 294 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~-l~--~~~ 294 (734)
.||.|.+..+. ...++..... ....-.++||||.|+-... ...|.+|++.++..-. ++ +..
T Consensus 171 --------svWmw~ip~~~--~~kv~~Gh~~--~ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg~p~~~~~~~e~~ 234 (399)
T KOG0296|consen 171 --------SVWMWQIPSQA--LCKVMSGHNS--PCTCGEFIPDGKRILTGYD----DGTIIVWNPKTGQPLHKITQAEGL 234 (399)
T ss_pred --------cEEEEECCCcc--eeeEecCCCC--CcccccccCCCceEEEEec----CceEEEEecCCCceeEEecccccC
Confidence 69999998752 3346655322 2334579999999975432 2578889988842100 00 000
Q ss_pred Cce---------eeeccccceEEEEEecC-CeEEEEeCC------------------------------CCCCceEEEEe
Q psy4818 295 PLK---------TVIPGMDHHHEIIANNG-PELIVKTTK------------------------------NAPKGKVVTIN 334 (734)
Q Consensus 295 ~~~---------~l~~~~~~~~~~~s~dg-~~l~~~s~~------------------------------~~~~~~l~~~d 334 (734)
+.+ .++.+.......+...+ .++++..|. +.-.++|..||
T Consensus 235 ~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD 314 (399)
T KOG0296|consen 235 ELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYD 314 (399)
T ss_pred cCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEe
Confidence 010 01111111111111111 122222221 01235677777
Q ss_pred cCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEE
Q psy4818 335 LNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~ 414 (734)
++... ++...++. ..++ ...|.+ ...+++...+ ..|+.||..+|..+...+.+...|..++.+++.+ ++++
T Consensus 315 ~a~~~---~R~~c~he-~~V~-~l~w~~-t~~l~t~c~~--g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~-~vvT 385 (399)
T KOG0296|consen 315 LAAST---LRHICEHE-DGVT-KLKWLN-TDYLLTACAN--GKVRQWDARTGQLKFTYTGHQMGILDFALSPQKR-LVVT 385 (399)
T ss_pred cccch---hheeccCC-CceE-EEEEcC-cchheeeccC--ceEEeeeccccceEEEEecCchheeEEEEcCCCc-EEEE
Confidence 76544 34444444 2333 333443 3334444444 4789999989998888887766677888888764 4455
Q ss_pred EecCC
Q psy4818 415 FTSFL 419 (734)
Q Consensus 415 ~ss~~ 419 (734)
.|..+
T Consensus 386 ~s~D~ 390 (399)
T KOG0296|consen 386 VSDDN 390 (399)
T ss_pred ecCCC
Confidence 55443
No 199
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.52 E-value=0.00012 Score=77.24 Aligned_cols=268 Identities=16% Similarity=0.151 Sum_probs=129.2
Q ss_pred EeeEEeCCCCcEEEEEEeCC-CCceEEEEEEECCCCCcccc---cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKS-GSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~-g~~~~~l~v~dl~~g~~~~~---~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
-+.+++||++++|..+.... ....-..+-++-++|+.... ...+...-.++.+||++.|+.....
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~----------- 107 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG----------- 107 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc-----------
Confidence 45688999998765444322 22223344444444553221 1122222467889999988776532
Q ss_pred cccCCcEEEEEECCCCCC-CCe-eEEe----cC----CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc
Q psy4818 220 TAHMGQKIYYHVLGTEQD-KDI-PVVE----FP----NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 289 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~-~~~-~v~~----~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 289 (734)
...|.++++..... ... .++. .+ ........+.++|||+++++.. . ....|++++++. ....
T Consensus 108 ----~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~d-l--G~D~v~~~~~~~-~~~~ 179 (345)
T PF10282_consen 108 ----GGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPD-L--GADRVYVYDIDD-DTGK 179 (345)
T ss_dssp ----TTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEE-T--TTTEEEEEEE-T-TS-T
T ss_pred ----CCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEe-c--CCCEEEEEEEeC-CCce
Confidence 22466666654211 000 0110 01 0112345689999999997643 2 225788888876 2222
Q ss_pred ccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecC--CCCCCCceE--eecCCC--CceeEEEEEe-e
Q psy4818 290 ISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKT--LIPEDE--NRTLDVVAAV-A 362 (734)
Q Consensus 290 l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~--l~~~~~--~~~~~~~~~~-~ 362 (734)
|+. .....+-.+.......|+|||+.+|++.... ..|..+++. ++....++. .++... ......+.+. +
T Consensus 180 l~~-~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s---~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispd 255 (345)
T PF10282_consen 180 LTP-VDSIKVPPGSGPRHLAFSPDGKYAYVVNELS---NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPD 255 (345)
T ss_dssp EEE-EEEEECSTTSSEEEEEE-TTSSEEEEEETTT---TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TT
T ss_pred EEE-eeccccccCCCCcEEEEcCCcCEEEEecCCC---CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecC
Confidence 321 0001122233334445999999888876543 346665655 332111111 122211 1123344444 4
Q ss_pred CCEEEEEEEeCCceeEEEEEC--CCCceeeeeCC-C-Cce-EEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy4818 363 NNKLIVHYIQNVRSVMDLHDL--NTGKRLHSFPL-D-LGQ-ITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 437 (734)
Q Consensus 363 ~~~l~~~~~~~~~~~l~~~dl--~~g~~~~~l~~-~-~g~-v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~ 437 (734)
++++|++. +. ...|.++++ .+|+. +.+.. + .|. -..+.++++++.+++....-. --.+|.+|. ++|
T Consensus 256 g~~lyvsn-r~-~~sI~vf~~d~~~g~l-~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~-~v~vf~~d~-----~tG 326 (345)
T PF10282_consen 256 GRFLYVSN-RG-SNSISVFDLDPATGTL-TLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSN-TVSVFDIDP-----DTG 326 (345)
T ss_dssp SSEEEEEE-CT-TTEEEEEEECTTTTTE-EEEEEEEESSSSEEEEEE-TTSSEEEEEETTTT-EEEEEEEET-----TTT
T ss_pred CCEEEEEe-cc-CCEEEEEEEecCCCce-EEEEEEeCCCCCccEEEEeCCCCEEEEEecCCC-eEEEEEEeC-----CCC
Confidence 34555543 33 356777776 44553 33321 1 122 346777899988887665443 234556665 566
Q ss_pred CCceeEEe
Q psy4818 438 DFKPTIFR 445 (734)
Q Consensus 438 ~~~~~~~~ 445 (734)
.++...
T Consensus 327 --~l~~~~ 332 (345)
T PF10282_consen 327 --KLTPVG 332 (345)
T ss_dssp --EEEEEE
T ss_pred --cEEEec
Confidence 444433
No 200
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.51 E-value=1.2e-05 Score=89.55 Aligned_cols=154 Identities=12% Similarity=0.056 Sum_probs=97.2
Q ss_pred EEeCCeEEEEEEc---CCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC-------CCc
Q psy4818 97 QRQENNYFYFHNK---GLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-------GSD 166 (734)
Q Consensus 97 ~~~g~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~-------g~~ 166 (734)
+++|++++|+... ..+....||+.+. ++..+.++... .+..++|||||++|+|..+.+ ...
T Consensus 358 SpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--------~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~ 428 (591)
T PRK13616 358 SRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--------SLTRPSWSLDADAVWVVVDGNTVVRVIRDPA 428 (591)
T ss_pred CCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--------CCCCceECCCCCceEEEecCcceEEEeccCC
Confidence 4889999999852 1234568888775 44556655422 267899999999999987531 123
Q ss_pred eEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEE---EECCCCCCCCe---
Q psy4818 167 WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY---HVLGTEQDKDI--- 240 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~---~~l~t~~~~~~--- 240 (734)
..+|+++++++|+... .... .+..+.|||||++|+|+.. .+|++ ...+.+. ..+
T Consensus 429 ~gql~~~~vd~ge~~~-~~~g-~Issl~wSpDG~RiA~i~~-----------------g~v~Va~Vvr~~~G~-~~l~~~ 488 (591)
T PRK13616 429 TGQLARTPVDASAVAS-RVPG-PISELQLSRDGVRAAMIIG-----------------GKVYLAVVEQTEDGQ-YALTNP 488 (591)
T ss_pred CceEEEEeccCchhhh-ccCC-CcCeEEECCCCCEEEEEEC-----------------CEEEEEEEEeCCCCc-eeeccc
Confidence 3689999998887543 2222 2479999999999999872 15666 3323332 111
Q ss_pred -eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 241 -PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 241 -~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+.... .....++.|..|++.+ +.. . .....+|.+++++
T Consensus 489 ~~l~~~l--~~~~~~l~W~~~~~L~-V~~-~-~~~~~v~~v~vDG 528 (591)
T PRK13616 489 REVGPGL--GDTAVSLDWRTGDSLV-VGR-S-DPEHPVWYVNLDG 528 (591)
T ss_pred EEeeccc--CCccccceEecCCEEE-EEe-c-CCCCceEEEecCC
Confidence 011111 1112568899999944 332 2 2336789999987
No 201
>KOG0291|consensus
Probab=98.50 E-value=0.00012 Score=78.97 Aligned_cols=238 Identities=13% Similarity=0.118 Sum_probs=142.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc-cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~-~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+...++.+--+.||.... +| ..+++.+.+-..+ ...+........+|+--|.+|++....
T Consensus 268 vtaa~fH~~t~~lvvgFs-sG----~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~k-------------- 328 (893)
T KOG0291|consen 268 VTAAAFHKGTNLLVVGFS-SG----EFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSK-------------- 328 (893)
T ss_pred eeeeeccCCceEEEEEec-CC----eeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCc--------------
Confidence 445556655555554432 11 2233333333222 123443445788999999999998642
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
-.+|-+|+..+.. .|+.-..+......+++||||++|+- +.+...|.+||..+|- .......+
T Consensus 329 -lgQLlVweWqsEs----YVlKQQgH~~~i~~l~YSpDgq~iaT----G~eDgKVKvWn~~Sgf--------C~vTFteH 391 (893)
T KOG0291|consen 329 -LGQLLVWEWQSES----YVLKQQGHSDRITSLAYSPDGQLIAT----GAEDGKVKVWNTQSGF--------CFVTFTEH 391 (893)
T ss_pred -cceEEEEEeeccc----eeeeccccccceeeEEECCCCcEEEe----ccCCCcEEEEeccCce--------EEEEeccC
Confidence 2256666654321 33333333334567899999999983 3445789999988732 22333333
Q ss_pred ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
....... |+.+|+.++ .+.- ++.+-.||+.... +.+..+.+. +....-+.....+-+++....+. -.|++|
T Consensus 392 ts~Vt~v~f~~~g~~ll-ssSL---DGtVRAwDlkRYr--NfRTft~P~-p~QfscvavD~sGelV~AG~~d~-F~IfvW 463 (893)
T KOG0291|consen 392 TSGVTAVQFTARGNVLL-SSSL---DGTVRAWDLKRYR--NFRTFTSPE-PIQFSCVAVDPSGELVCAGAQDS-FEIFVW 463 (893)
T ss_pred CCceEEEEEEecCCEEE-Eeec---CCeEEeeeecccc--eeeeecCCC-ceeeeEEEEcCCCCEEEeeccce-EEEEEE
Confidence 2223333 888877554 3333 3568889986533 466666655 33333333333255666655553 579999
Q ss_pred ECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++++|+.+..|..+.|-|++++++++++ ++++ .|+. .++.+||+
T Consensus 464 S~qTGqllDiLsGHEgPVs~l~f~~~~~-~LaS-~SWD--kTVRiW~i 507 (893)
T KOG0291|consen 464 SVQTGQLLDILSGHEGPVSGLSFSPDGS-LLAS-GSWD--KTVRIWDI 507 (893)
T ss_pred EeecCeeeehhcCCCCcceeeEEccccC-eEEe-cccc--ceEEEEEe
Confidence 9999999888888888898889999887 3344 3444 25666665
No 202
>KOG2314|consensus
Probab=98.50 E-value=4.6e-05 Score=79.16 Aligned_cols=294 Identities=18% Similarity=0.220 Sum_probs=152.5
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCC----eEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEe------
Q psy4818 92 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGS----TEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS------ 161 (734)
Q Consensus 92 ~~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~----~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~------ 161 (734)
.+-.|+|.|.|++-.+.+| -.|| ||+ .+.+..+ .+..+.|||..+||+--+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G----I~lW-----GG~~f~r~~RF~Hp---------~Vq~idfSP~EkYLVT~s~~p~~~~ 275 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG----IALW-----GGESFDRIQRFYHP---------GVQFIDFSPNEKYLVTYSPEPIIVE 275 (698)
T ss_pred eeEEecCCceEEEEEeccc----eeee-----cCccHHHHHhccCC---------CceeeecCCccceEEEecCCccccC
Confidence 3567788898888777665 3344 332 1223332 3678899999999874322
Q ss_pred CCCCceEEEEEEECCCCCcccc-cc--cc-cccCeeEEEcCCcEEEEEEEecCCC--CC------------CCCccccc-
Q psy4818 162 KSGSDWNTLHIKDVDTGKDYPE-VL--KN-VKFPSISWTHDHKGFFYNQYCDING--TA------------DGTETTAH- 222 (734)
Q Consensus 162 ~~g~~~~~l~v~dl~~g~~~~~-~~--~~-~~~~~~~wSpDg~~l~y~~~~~~~~--~~------------~~~~~~~~- 222 (734)
....|..+|.+||+.||..... .. .. ....-+.||.|+|+++-...+...- .+ +|...-+.
T Consensus 276 ~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~Fsws 355 (698)
T KOG2314|consen 276 EDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWS 355 (698)
T ss_pred cccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccC
Confidence 1233557899999999975321 11 11 1225689999999877654432110 00 01000000
Q ss_pred -CCcEEEEEECCCCC-CCCeeEEecCCCC---------eeEEEEEEecCCcEEEEEEecCCCC------c--eEEEEeCC
Q psy4818 223 -MGQKIYYHVLGTEQ-DKDIPVVEFPNGR---------SLGLHSEVTDCGRYLLVSTSNNTQG------S--DLHYFDLH 283 (734)
Q Consensus 223 -~~~~l~~~~l~t~~-~~~~~v~~~~~~~---------~~~~~~~~SpDG~~l~~~~~~~~~~------~--~i~~~d~~ 283 (734)
...-|-+|.-.+.+ +..+.+.+.|... .....+.|-..|.||.+...+.... + +|+.++-.
T Consensus 356 P~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireK 435 (698)
T KOG2314|consen 356 PTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREK 435 (698)
T ss_pred CCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeecc
Confidence 01123333222211 1112222222111 0113567999999999988764432 2 34444332
Q ss_pred CCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCC-CCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-
Q psy4818 284 SLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNA-PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA- 360 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~-~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~- 360 (734)
. .++..+ .-.+....+ |.|.|+++.+++.... .+-+.|.+...... +. |+..-+......+.+
T Consensus 436 d---------Ipve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~---~~-lVk~~dk~~~N~vfws 501 (698)
T KOG2314|consen 436 D---------IPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK---PS-LVKELDKKFANTVFWS 501 (698)
T ss_pred C---------CCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc---hh-hhhhhcccccceEEEc
Confidence 2 233222 222333344 9999999998876543 34455655543333 23 333322222333444
Q ss_pred eeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecC
Q psy4818 361 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 361 ~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
+.|+.+++.........|+.+|+.-.. .+.+..+ ....+.+.++|.|+.+....+++
T Consensus 502 PkG~fvvva~l~s~~g~l~F~D~~~a~-~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 502 PKGRFVVVAALVSRRGDLEFYDTDYAD-LKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred CCCcEEEEEEecccccceEEEecchhh-hhhccCccccccccceECCCCCEEEEeeehh
Confidence 444556666666556789999884222 2333333 23345677888887665554444
No 203
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.50 E-value=5.2e-07 Score=90.98 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=90.3
Q ss_pred EEEEEEEcCC-CcEEeEEEEEecccc---CCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 459 TKQVYFRSKD-GTRVPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 459 ~~~~~~~s~d-g~~i~~~~~~p~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
...+++.... +.+++..+++|.... .....|+|++.||.... ...|. ..++.+++.||+|+.++..|+..-+.
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~--~~~f~-~~A~~lAs~Gf~Va~~~hpgs~~~~~ 114 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY--VTGFA-WLAEHLASYGFVVAAPDHPGSNAGGA 114 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC--ccchh-hhHHHHhhCceEEEeccCCCcccccC
Confidence 4556665543 568999999987642 11489999999995333 22333 24577888999999999999765443
Q ss_pred hhhhccccc----cCCCchhHHHHHHHHHHHc---C----CCCCCcEEEEEcChHHHHHHHHHhcCCC
Q psy4818 535 DWHNAGRLL----KKQNCFDDFQAAAEYMINK---K----YTKPKYITIMGGSNGGLLVGACLNQRPE 591 (734)
Q Consensus 535 ~~~~~~~~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~ri~i~G~S~GG~~~~~~~~~~p~ 591 (734)
.=+.++... .......|+...+++|.+. . .+|+.+|++.|||+||+.++.++.-+.+
T Consensus 115 ~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 115 PAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 333333111 1123356888888888776 3 5899999999999999999999865544
No 204
>KOG2055|consensus
Probab=98.47 E-value=8e-06 Score=82.81 Aligned_cols=204 Identities=12% Similarity=0.096 Sum_probs=114.7
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
++..+.+|||+++||+.-. ...|+++...|++.+....-......+.||-||+.|+.+..+
T Consensus 305 ~~e~FeVShd~~fia~~G~-----~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~-------------- 365 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAGN-----NGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGT-------------- 365 (514)
T ss_pred hhheeEecCCCCeEEEccc-----CceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCC--------------
Confidence 5678999999999997532 247999999999866533333345899999999888876542
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
.+||+++++..... ..|.. ++...-.+++.|++|+|+|.-+. ..-|-+||.++.... +...|...+-.-
T Consensus 366 --GeV~v~nl~~~~~~--~rf~D-~G~v~gts~~~S~ng~ylA~GS~----~GiVNIYd~~s~~~s--~~PkPik~~dNL 434 (514)
T KOG2055|consen 366 --GEVYVWNLRQNSCL--HRFVD-DGSVHGTSLCISLNGSYLATGSD----SGIVNIYDGNSCFAS--TNPKPIKTVDNL 434 (514)
T ss_pred --ceEEEEecCCcceE--EEEee-cCccceeeeeecCCCceEEeccC----cceEEEeccchhhcc--CCCCchhhhhhh
Confidence 27999999876322 22222 12224457889999999985332 234556665441110 011122211111
Q ss_pred ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCC-CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 303 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNP-CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 303 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
...... .|+||++.|++.++......+| +.+.+- ...+|... ...-..+..+.+..++.++...+..|+..|+.
T Consensus 435 tt~Itsl~Fn~d~qiLAiaS~~~knalrL--VHvPS~TVFsNfP~~--n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 435 TTAITSLQFNHDAQILAIASRVKKNALRL--VHVPSCTVFSNFPTS--NTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK 510 (514)
T ss_pred heeeeeeeeCcchhhhhhhhhccccceEE--EeccceeeeccCCCC--CCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence 111222 3999999999888764433444 444332 12223211 11112233444444455555666666544443
No 205
>KOG2055|consensus
Probab=98.46 E-value=8.8e-06 Score=82.52 Aligned_cols=232 Identities=13% Similarity=0.116 Sum_probs=132.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc----cccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN----VKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~----~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
+.+....|+|+|+..+|++.+ +.-+|.||+.+++..+..... -....+..|||++.|++.....
T Consensus 258 fPi~~a~f~p~G~~~i~~s~r----rky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G-------- 325 (514)
T KOG2055|consen 258 FPIQKAEFAPNGHSVIFTSGR----RKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNG-------- 325 (514)
T ss_pred CccceeeecCCCceEEEeccc----ceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCc--------
Confidence 446678999999966666543 367999999999864432211 1235688899999888766422
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|++....|+. ++...+ -.+.+.++.||.||+.|+.... ..+||+||+... ....
T Consensus 326 --------~I~lLhakT~e----li~s~K-ieG~v~~~~fsSdsk~l~~~~~----~GeV~v~nl~~~--------~~~~ 380 (514)
T KOG2055|consen 326 --------HIHLLHAKTKE----LITSFK-IEGVVSDFTFSSDSKELLASGG----TGEVYVWNLRQN--------SCLH 380 (514)
T ss_pred --------eEEeehhhhhh----hhheee-eccEEeeEEEecCCcEEEEEcC----CceEEEEecCCc--------ceEE
Confidence 45555444432 222221 1335678999999999886532 259999999871 1122
Q ss_pred eeecc-ccceEEE-EEecCCeEEEEeCCCCCCceEEEEec--CCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEe
Q psy4818 298 TVIPG-MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINL--NNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 298 ~l~~~-~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~--~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
+.+.+ .-.+... .|++|++++.-++. +--.||-.+- .+..+ +.+..-. -...+.++.+..+..|+...++
T Consensus 381 rf~D~G~v~gts~~~S~ng~ylA~GS~~--GiVNIYd~~s~~~s~~P---kPik~~dNLtt~Itsl~Fn~d~qiLAiaS~ 455 (514)
T KOG2055|consen 381 RFVDDGSVHGTSLCISLNGSYLATGSDS--GIVNIYDGNSCFASTNP---KPIKTVDNLTTAITSLQFNHDAQILAIASR 455 (514)
T ss_pred EEeecCccceeeeeecCCCceEEeccCc--ceEEEeccchhhccCCC---CchhhhhhhheeeeeeeeCcchhhhhhhhh
Confidence 22221 1122333 78899866654443 2223444221 11221 2221111 0233455555555667766666
Q ss_pred CCceeEEEEECCCCceeeeeC---CCCceEEeeccCcccceEEEEE
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFP---LDLGQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~---~~~g~v~~~~~~~d~~~l~~~~ 415 (734)
.....|.++-+.+-..-.-++ .+.+.+.++.++|.+..+++..
T Consensus 456 ~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGN 501 (514)
T KOG2055|consen 456 VKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGN 501 (514)
T ss_pred ccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeec
Confidence 655666666664443322222 2356778888999888777653
No 206
>KOG0772|consensus
Probab=98.44 E-value=1.7e-05 Score=81.59 Aligned_cols=240 Identities=14% Similarity=0.134 Sum_probs=139.3
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc------------cccccc-ccCeeEEEcCCcEEEEEE
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP------------EVLKNV-KFPSISWTHDHKGFFYNQ 206 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~------------~~~~~~-~~~~~~wSpDg~~l~y~~ 206 (734)
....+.+.+|||.|..|+..+ |+ .+..|+|-++-+... .+.+.+ ....-.|.|+.+..|.+.
T Consensus 213 E~h~i~sl~ys~Tg~~iLvvs---g~--aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~ 287 (641)
T KOG0772|consen 213 ETHQINSLQYSVTGDQILVVS---GS--AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTC 287 (641)
T ss_pred cccccceeeecCCCCeEEEEe---cC--cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEe
Confidence 345688999999999988765 32 567777766533211 122222 124568999999998887
Q ss_pred EecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe-cCCCC--eeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 207 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE-FPNGR--SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~-~~~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
..+ ..+.+|++.....+ +.|+. .+... ......+|+|||++||-- .....|-+|+..
T Consensus 288 s~D---------------gtlRiWdv~~~k~q-~qVik~k~~~g~Rv~~tsC~~nrdg~~iAag----c~DGSIQ~W~~~ 347 (641)
T KOG0772|consen 288 SYD---------------GTLRIWDVNNTKSQ-LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAG----CLDGSIQIWDKG 347 (641)
T ss_pred cCC---------------CcEEEEecCCchhh-eeEEeeccCCCcccCceeeecCCCcchhhhc----ccCCceeeeecC
Confidence 543 25677776654433 23332 22111 123468999999998733 233567777764
Q ss_pred CCCCCcccCCCCceeeecccc---ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCC--CCceEeecCCCCceeEE
Q psy4818 284 SLPDGKISGKFPLKTVIPGMD---HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCE--KNWKTLIPEDENRTLDV 357 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~---~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~~~~ 357 (734)
+ ... .+...+-.... ....+ ||.||+.|+-.+. +..|-+||+...+. ..+..|...- ....
T Consensus 348 ~-~~v-----~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~----D~tLKvWDLrq~kkpL~~~tgL~t~~---~~td 414 (641)
T KOG0772|consen 348 S-RTV-----RPVMKVKDAHLPGQDITSISFSYDGNYLLSRGF----DDTLKVWDLRQFKKPLNVRTGLPTPF---PGTD 414 (641)
T ss_pred C-ccc-----ccceEeeeccCCCCceeEEEeccccchhhhccC----CCceeeeeccccccchhhhcCCCccC---CCCc
Confidence 4 110 11111111111 22333 9999998874333 34588999976431 0111121111 1122
Q ss_pred EEEeeCCEEEEEEEeC----CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEec
Q psy4818 358 VAAVANNKLIVHYIQN----VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 358 ~~~~~~~~l~~~~~~~----~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss 417 (734)
+.+..++.|+++...- +...|+.+|..+-+.+.+|..+..+|....|.|.-+.+++....
T Consensus 415 c~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgd 478 (641)
T KOG0772|consen 415 CCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGD 478 (641)
T ss_pred cccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCC
Confidence 3333347888776532 23479999987777777887776677788888888777766544
No 207
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.41 E-value=1.1e-05 Score=87.25 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=60.0
Q ss_pred HHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhH----HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHH-
Q psy4818 510 RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD----FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA- 584 (734)
Q Consensus 510 ~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D----~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~- 584 (734)
+.++|.++|+.|++++.|.-+... ....++| +.+|++.+.+. +..++|-++|+|+||.++++
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~-----------r~~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~ 305 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAH-----------REWGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAAL 305 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhh-----------cCCCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHH
Confidence 567777789999999998733221 2222334 44566665443 56678999999999999997
Q ss_pred ---HHhcCCC-ceeEEEEcCCcchhc
Q psy4818 585 ---CLNQRPE-LYGAALILVGALDML 606 (734)
Q Consensus 585 ---~~~~~p~-~~~a~v~~~~~~d~~ 606 (734)
+++++++ .++.++..+..+|+.
T Consensus 306 ~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 306 VGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHHhcCCCCceeeEEeeecccccC
Confidence 6777786 689888877766643
No 208
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.41 E-value=2.6e-06 Score=79.93 Aligned_cols=213 Identities=13% Similarity=0.169 Sum_probs=112.7
Q ss_pred EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCC----CCCchhhhcc
Q psy4818 465 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG----ELGEDWHNAG 540 (734)
Q Consensus 465 ~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~----~~g~~~~~~~ 540 (734)
.-.+|+.|..|--.|+.- ...++|+||..-| |+..+. .|. ..+.+|+.+||.|+.+|.--+= |-=.+|...
T Consensus 8 ~~~~~~~I~vwet~P~~~-~~~~~~tiliA~G-f~rrmd-h~a-gLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms- 82 (294)
T PF02273_consen 8 RLEDGRQIRVWETRPKNN-EPKRNNTILIAPG-FARRMD-HFA-GLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS- 82 (294)
T ss_dssp EETTTEEEEEEEE---TT-S---S-EEEEE-T-T-GGGG-GGH-HHHHHHHTTT--EEEE---B-------------HH-
T ss_pred EcCCCCEEEEeccCCCCC-CcccCCeEEEecc-hhHHHH-HHH-HHHHHHhhCCeEEEeccccccccCCCCChhhcchH-
Confidence 446899999999999873 4567788888765 455543 343 4567888899999999864321 111111110
Q ss_pred ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccc
Q psy4818 541 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESE 620 (734)
Q Consensus 541 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~ 620 (734)
...+|+..+++||...|. .+++++-.|.-|-++...++. ++ ..-.|..+|++|+..+.....+..+...
T Consensus 83 ------~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~~ 151 (294)
T PF02273_consen 83 ------IGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQL 151 (294)
T ss_dssp ------HHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS
T ss_pred ------HhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhhc
Confidence 124688899999997764 569999999999999999985 55 4788888899998766432222211110
Q ss_pred c--CCCCC---------HHHH-HHHH--hCCc----cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 621 F--GSPNN---------KTHF-HNLL--SYSP----LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 621 ~--g~~~~---------~~~~-~~~~--~~sp----~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
. +.|.+ .+.| .... .+.+ ...++. ...| ++..++..|..|...+..++...+..
T Consensus 152 ~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~----l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s--- 223 (294)
T PF02273_consen 152 PIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKR----LSIP-FIAFTANDDDWVKQSEVEELLDNINS--- 223 (294)
T ss_dssp -GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT------S--EEEEEETT-TTS-HHHHHHHHTT-TT---
T ss_pred chhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhh----CCCC-EEEEEeCCCccccHHHHHHHHHhcCC---
Confidence 0 11111 1111 1111 1111 223443 6677 99999999999988877766655433
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCch
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPL 707 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (734)
..+.+...+|++|-.....
T Consensus 224 ------~~~klysl~Gs~HdL~enl 242 (294)
T PF02273_consen 224 ------NKCKLYSLPGSSHDLGENL 242 (294)
T ss_dssp --------EEEEEETT-SS-TTSSH
T ss_pred ------CceeEEEecCccchhhhCh
Confidence 3578888899999987654
No 209
>KOG3847|consensus
Probab=98.41 E-value=1.1e-05 Score=78.28 Aligned_cols=112 Identities=21% Similarity=0.231 Sum_probs=72.4
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCC--------------CCchhhhcccccc--C---
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE--------------LGEDWHNAGRLLK--K--- 545 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~--------------~g~~~~~~~~~~~--~--- 545 (734)
++++|+||+.||-.+++. .|+..+.. |+.+||+|+++..|-.+- +-..|..--.... +
T Consensus 115 ~~k~PvvvFSHGLggsRt--~YSa~c~~-LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRT--LYSAYCTS-LASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCccEEEEecccccchh--hHHHHhhh-HhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 678999999999755543 35555544 567899999999997321 1122322110000 0
Q ss_pred -CC-----chhHHHHHHHHHHH---------------------cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEE
Q psy4818 546 -QN-----CFDDFQAAAEYMIN---------------------KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 598 (734)
Q Consensus 546 -~~-----~~~D~~~~~~~l~~---------------------~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 598 (734)
+| -...+..|++-|.+ ++.+|..+++|+|||.||..+++....+. .|+++|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 01 13455555555433 23467889999999999999999988654 6888886
Q ss_pred cC
Q psy4818 599 LV 600 (734)
Q Consensus 599 ~~ 600 (734)
.-
T Consensus 271 lD 272 (399)
T KOG3847|consen 271 LD 272 (399)
T ss_pred ee
Confidence 54
No 210
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.41 E-value=9.2e-05 Score=76.43 Aligned_cols=205 Identities=11% Similarity=0.062 Sum_probs=107.5
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeE--------EEcCCcEEEEEEEecCCCCCCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSIS--------WTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~--------wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
.+.+|||||+|.+.-- .. ...+-|+|+++++.+... ..++. ..+. -+.||+.+.++...+
T Consensus 109 ~~~ls~dgk~l~V~n~-~p--~~~V~VvD~~~~kvv~ei~vp~~~-~vy~t~e~~~~~~~~Dg~~~~v~~d~~------- 177 (352)
T TIGR02658 109 MTSLTPDNKTLLFYQF-SP--SPAVGVVDLEGKAFVRMMDVPDCY-HIFPTANDTFFMHCRDGSLAKVGYGTK------- 177 (352)
T ss_pred eEEECCCCCEEEEecC-CC--CCEEEEEECCCCcEEEEEeCCCCc-EEEEecCCccEEEeecCceEEEEecCC-------
Confidence 6899999998775432 21 257999999999865421 22221 1222 245555444433211
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
+ ++... ...+|...+++ .+..+.+++ ||++++++. + ..|+++|+.+..... ..+
T Consensus 178 -----g---~~~~~--------~~~vf~~~~~~-v~~rP~~~~~dg~~~~vs~-e----G~V~~id~~~~~~~~---~~~ 232 (352)
T TIGR02658 178 -----G---NPKIK--------PTEVFHPEDEY-LINHPAYSNKSGRLVWPTY-T----GKIFQIDLSSGDAKF---LPA 232 (352)
T ss_pred -----C---ceEEe--------eeeeecCCccc-cccCCceEcCCCcEEEEec-C----CeEEEEecCCCccee---cce
Confidence 0 11111 11222211111 122234566 888877543 2 689999976622111 112
Q ss_pred ceeeecc------ccceEE--EEEecCCeEEEEeCCC------CCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe
Q psy4818 296 LKTVIPG------MDHHHE--IIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV 361 (734)
Q Consensus 296 ~~~l~~~------~~~~~~--~~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 361 (734)
|..+... +..++. .+++||+++|++.... .+...|..+|.++.+ ....++-. .....+.+.
T Consensus 233 ~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k---vi~~i~vG--~~~~~iavS 307 (352)
T TIGR02658 233 IEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK---RLRKIELG--HEIDSINVS 307 (352)
T ss_pred eeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe---EEEEEeCC--CceeeEEEC
Confidence 2222111 112222 2889999999865421 122469999998765 23333322 122344444
Q ss_pred eCCE-EEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 362 ANNK-LIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 362 ~~~~-l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
.+++ +++..+. ....|.++|.++++.++.+
T Consensus 308 ~Dgkp~lyvtn~-~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 308 QDAKPLLYALST-GDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCCeEEEEeCC-CCCcEEEEECcCCeEEeee
Confidence 4445 5555443 2356999999999887777
No 211
>KOG0772|consensus
Probab=98.41 E-value=1.4e-05 Score=82.03 Aligned_cols=208 Identities=16% Similarity=0.110 Sum_probs=117.7
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCC-----CCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEE
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLT-----GSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 171 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~-----g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~ 171 (734)
++-|+.+..+. +..|..|+=|+... .+-+.+.|.+ ..+++...+..-.|.|+.+-...+.+..| +++
T Consensus 223 s~Tg~~iLvvs---g~aqakl~DRdG~~~~e~~KGDQYI~Dm~-nTKGHia~lt~g~whP~~k~~FlT~s~Dg----tlR 294 (641)
T KOG0772|consen 223 SVTGDQILVVS---GSAQAKLLDRDGFEIVEFSKGDQYIRDMY-NTKGHIAELTCGCWHPDNKEEFLTCSYDG----TLR 294 (641)
T ss_pred cCCCCeEEEEe---cCcceeEEccCCceeeeeeccchhhhhhh-ccCCceeeeeccccccCcccceEEecCCC----cEE
Confidence 34566555444 23355565544221 1123344543 23556677889999999999888887665 589
Q ss_pred EEECCCCC-cccc------cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCe-eEE
Q psy4818 172 IKDVDTGK-DYPE------VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI-PVV 243 (734)
Q Consensus 172 v~dl~~g~-~~~~------~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~-~v~ 243 (734)
+||+..-+ .++. ....+.....+|+|||+.|+-...+. .|-.|+.+....... .+-
T Consensus 295 iWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DG----------------SIQ~W~~~~~~v~p~~~vk 358 (641)
T KOG0772|consen 295 IWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDG----------------SIQIWDKGSRTVRPVMKVK 358 (641)
T ss_pred EEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCC----------------ceeeeecCCcccccceEee
Confidence 99987543 1111 11222346789999999987766543 455666554332221 222
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCC
Q psy4818 244 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTK 323 (734)
Q Consensus 244 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~ 323 (734)
.......-+.++.||+||++|+ ++ +....+.+|||.. ...+|. .+..|...+......||||.+ |++....
T Consensus 359 ~AH~~g~~Itsi~FS~dg~~Ll---SR-g~D~tLKvWDLrq-~kkpL~---~~tgL~t~~~~tdc~FSPd~k-li~TGtS 429 (641)
T KOG0772|consen 359 DAHLPGQDITSISFSYDGNYLL---SR-GFDDTLKVWDLRQ-FKKPLN---VRTGLPTPFPGTDCCFSPDDK-LILTGTS 429 (641)
T ss_pred eccCCCCceeEEEeccccchhh---hc-cCCCceeeeeccc-cccchh---hhcCCCccCCCCccccCCCce-EEEeccc
Confidence 2211112456899999999998 23 3447899999987 333331 122233333333345999965 5554332
Q ss_pred ---CCCCceEEEEecCC
Q psy4818 324 ---NAPKGKVVTINLNN 337 (734)
Q Consensus 324 ---~~~~~~l~~~d~~~ 337 (734)
+.....|+.+|..+
T Consensus 430 ~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 430 APNGMTAGTLFFFDRMT 446 (641)
T ss_pred ccCCCCCceEEEEeccc
Confidence 11233577777654
No 212
>KOG1553|consensus
Probab=98.40 E-value=1.4e-06 Score=85.15 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=96.0
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccC-CCCCchhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWH 537 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~~~~ 537 (734)
-.+.++++.||.+|...++.......+...-+|++.-|.-|.-...- +..-+ +.||.|+-.|.+|- |.-|
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEvG~----m~tP~-~lgYsvLGwNhPGFagSTG---- 284 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEVGV----MNTPA-QLGYSVLGWNHPGFAGSTG---- 284 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEeee----ecChH-HhCceeeccCCCCccccCC----
Confidence 46788889999999988886443222334557788777433221111 11223 36999999999982 2223
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
.....++..-..+++++.++.--..++.|.++|||-||+.+++++..+||. +|+|+.+-|-|++-.
T Consensus 285 ----~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllpL 350 (517)
T KOG1553|consen 285 ----LPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLPL 350 (517)
T ss_pred ----CCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhhH
Confidence 123455666677788888887555778899999999999999999999986 999999998887643
No 213
>KOG0263|consensus
Probab=98.40 E-value=9.1e-06 Score=87.83 Aligned_cols=195 Identities=10% Similarity=0.095 Sum_probs=117.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+.+.+||||.++|.= .+|...+++|.+.+-..+-.-.++ ..+..+.|+|-| .||.+.-.
T Consensus 452 GPVyg~sFsPd~rfLlS-----cSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G--yYFatas~----------- 513 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLLS-----CSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG--YYFATASH----------- 513 (707)
T ss_pred Cceeeeeecccccceee-----ccCCcceeeeecccceeEEEecCCCcceeeEEecCCc--eEEEecCC-----------
Confidence 45778999999998873 345578899998887654322222 223567788876 55555311
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
....+|| ..+...+. .||...-. -+..+.|.|+..|++ .++....+.+||..+|. ..+++
T Consensus 514 -D~tArLW--s~d~~~Pl--Rifaghls--DV~cv~FHPNs~Y~a----TGSsD~tVRlWDv~~G~---------~VRiF 573 (707)
T KOG0263|consen 514 -DQTARLW--STDHNKPL--RIFAGHLS--DVDCVSFHPNSNYVA----TGSSDRTVRLWDVSTGN---------SVRIF 573 (707)
T ss_pred -Cceeeee--ecccCCch--hhhccccc--ccceEEECCcccccc----cCCCCceEEEEEcCCCc---------EEEEe
Confidence 1122444 33333322 34433211 123478999999998 23334789999998842 24455
Q ss_pred ccccce-EEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 301 PGMDHH-HEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 301 ~~~~~~-~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
.+.... ... +||+|++|.- ++..+.|..||+.++.. +..+..+ ...+..+.+..++.++++...+ ..|
T Consensus 574 ~GH~~~V~al~~Sp~Gr~LaS----g~ed~~I~iWDl~~~~~--v~~l~~H--t~ti~SlsFS~dg~vLasgg~D--nsV 643 (707)
T KOG0263|consen 574 TGHKGPVTALAFSPCGRYLAS----GDEDGLIKIWDLANGSL--VKQLKGH--TGTIYSLSFSRDGNVLASGGAD--NSV 643 (707)
T ss_pred cCCCCceEEEEEcCCCceEee----cccCCcEEEEEcCCCcc--hhhhhcc--cCceeEEEEecCCCEEEecCCC--CeE
Confidence 444333 333 9999987773 23356799999988652 3444445 3445556555546666665443 679
Q ss_pred EEEECC
Q psy4818 379 DLHDLN 384 (734)
Q Consensus 379 ~~~dl~ 384 (734)
.+||+.
T Consensus 644 ~lWD~~ 649 (707)
T KOG0263|consen 644 RLWDLT 649 (707)
T ss_pred EEEEch
Confidence 999984
No 214
>KOG2564|consensus
Probab=98.39 E-value=1.2e-06 Score=83.65 Aligned_cols=118 Identities=19% Similarity=0.274 Sum_probs=76.0
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.++..++ ++..++-.|. ....|++++.|||..+.. +|.....++..+.-..++++|.||+|+---+
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~-- 119 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVE-- 119 (343)
T ss_pred cccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccC--
Confidence 445666665554 4666665554 356799999999855544 3444334444444567799999998764311
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~ 588 (734)
............|+.+.++++... ++..|.++||||||.++...+..
T Consensus 120 -~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 120 -NEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred -ChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 111112223457888888777532 45579999999999999887764
No 215
>KOG0273|consensus
Probab=98.39 E-value=7.7e-05 Score=76.09 Aligned_cols=254 Identities=12% Similarity=0.091 Sum_probs=149.2
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCC-------CC-
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDIN-------GT- 213 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~-------~~- 213 (734)
..+..+.|+-||..||+.+ +...+++|+..++...........+.++.|+.+|.+|+-...+... +.
T Consensus 236 kdVT~L~Wn~~G~~LatG~-----~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~ 310 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGS-----EDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV 310 (524)
T ss_pred CCcceEEecCCCCeEEEee-----cCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE
Confidence 4578899999999999865 3457999998776654433333334688999999888765543311 00
Q ss_pred -------CCC-Ccc---------cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCce
Q psy4818 214 -------ADG-TET---------TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 276 (734)
Q Consensus 214 -------~~~-~~~---------~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 276 (734)
+.. -+- .......|++..++...+.. .+.. +..-+..+.|.|-|+.|+-.+ +...
T Consensus 311 ~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~--t~~G--H~g~V~alk~n~tg~LLaS~S----dD~T 382 (524)
T KOG0273|consen 311 KQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVK--TFIG--HHGEVNALKWNPTGSLLASCS----DDGT 382 (524)
T ss_pred EEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcce--eeec--ccCceEEEEECCCCceEEEec----CCCe
Confidence 000 000 01122356777776654332 2222 223456789999999887322 2356
Q ss_pred EEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCe-------EEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 277 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPE-------LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 277 i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~-------l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
+.+|..... .....+-......+.. |+|+|.- +.+++. ..+..|-.||+..+.+ .-.+..
T Consensus 383 lkiWs~~~~--------~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa--s~dstV~lwdv~~gv~--i~~f~k 450 (524)
T KOG0273|consen 383 LKIWSMGQS--------NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA--SFDSTVKLWDVESGVP--IHTLMK 450 (524)
T ss_pred eEeeecCCC--------cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEe--ecCCeEEEEEccCCce--eEeecc
Confidence 777776541 1122222333344443 7776541 111111 2244588888887652 334445
Q ss_pred CCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEe
Q psy4818 349 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 428 (734)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d 428 (734)
+. ..+-.+.+..++..+++.+.+ ..|.+|+..+|+..+.... .+.|..+.++.+++++...++.- .+..+|
T Consensus 451 H~--~pVysvafS~~g~ylAsGs~d--g~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~----~vcvld 521 (524)
T KOG0273|consen 451 HQ--EPVYSVAFSPNGRYLASGSLD--GCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASDG----SVCVLD 521 (524)
T ss_pred CC--CceEEEEecCCCcEEEecCCC--CeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecCC----CceEEE
Confidence 54 334455555546666666555 4788999999998777764 46677899999998887776542 345555
Q ss_pred C
Q psy4818 429 I 429 (734)
Q Consensus 429 ~ 429 (734)
+
T Consensus 522 l 522 (524)
T KOG0273|consen 522 L 522 (524)
T ss_pred e
Confidence 4
No 216
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.39 E-value=1.9e-06 Score=91.26 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=76.3
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHH-HHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 562 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 562 (734)
+...|++|++||.........|...+.. ++.+ ..+.|+++|.+|++... +..+. ..-...-+++.+.+++|.+.
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~--~~t~~vg~~la~lI~~L~~~ 113 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSA--AYTKLVGKDVAKFVNWMQEE 113 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--Ccccc--ccHHHHHHHHHHHHHHHHHh
Confidence 3457899999997654332345544433 3322 26999999999865321 11111 01111224566677777655
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
...+.+++.++|||+||.+++.++.+.|+++..++...|.
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 3467889999999999999999999989989999887764
No 217
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.39 E-value=6.6e-06 Score=78.19 Aligned_cols=204 Identities=14% Similarity=0.110 Sum_probs=109.5
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC-
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY- 564 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~- 564 (734)
.+.-++.+-|-|.+...-..| ...|.. -+.++.+.++| .|.. .+...++|+.+.++.|...-.
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W----~~~lp~-~iel~avqlPG---R~~r--------~~ep~~~di~~Lad~la~el~~ 69 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSW----SRRLPA-DIELLAVQLPG---RGDR--------FGEPLLTDIESLADELANELLP 69 (244)
T ss_pred CCceEEEecCCCCCHHHHHHH----HhhCCc-hhheeeecCCC---cccc--------cCCcccccHHHHHHHHHHHhcc
Confidence 344466666666443332222 233332 47799999999 3322 223335677777777766532
Q ss_pred -CCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcchhcccc-ccccCccc---cccc-CCC----CCHH
Q psy4818 565 -TKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRFN-KFTIAYYS---ESEF-GSP----NNKT 628 (734)
Q Consensus 565 -~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~-~~~~~~~~---~~~~-g~~----~~~~ 628 (734)
.--...+++||||||.++.-++.+. |..|=..-+.+|..+-.... .... ..+ ..++ |.| +++|
T Consensus 70 ~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D-~~~l~~l~~lgG~p~e~led~E 148 (244)
T COG3208 70 PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDD-ADFLADLVDLGGTPPELLEDPE 148 (244)
T ss_pred ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCH-HHHHHHHHHhCCCChHHhcCHH
Confidence 2223699999999999999987542 32232333445522221111 0000 001 1122 444 3344
Q ss_pred HHHHH--------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCC
Q psy4818 629 HFHNL--------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAG 700 (734)
Q Consensus 629 ~~~~~--------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~g 700 (734)
.+..+ ....-|.....+ .+.+| +.++.|++|..|...+...|.+.. +..+.+.+++ +|
T Consensus 149 l~~l~LPilRAD~~~~e~Y~~~~~~--pl~~p-i~~~~G~~D~~vs~~~~~~W~~~t----------~~~f~l~~fd-Gg 214 (244)
T COG3208 149 LMALFLPILRADFRALESYRYPPPA--PLACP-IHAFGGEKDHEVSRDELGAWREHT----------KGDFTLRVFD-GG 214 (244)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCC--CcCcc-eEEeccCcchhccHHHHHHHHHhh----------cCCceEEEec-Cc
Confidence 32211 111122222221 27888 999999999998876655555443 4467888887 59
Q ss_pred CCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 701 HGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 701 H~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
|++..... ..+++++.++++
T Consensus 215 HFfl~~~~------~~v~~~i~~~l~ 234 (244)
T COG3208 215 HFFLNQQR------EEVLARLEQHLA 234 (244)
T ss_pred ceehhhhH------HHHHHHHHHHhh
Confidence 99875432 234566666664
No 218
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.38 E-value=0.00019 Score=75.42 Aligned_cols=116 Identities=12% Similarity=0.138 Sum_probs=68.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC-CCccc--ccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYP--EVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~-g~~~~--~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+.++|||++|+.+.... ..|.++++++ |.... ... .........++|||+.++.....
T Consensus 82 p~~i~~~~~g~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~----------- 146 (330)
T PRK11028 82 PTHISTDHQGRFLFSASYNA----NCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK----------- 146 (330)
T ss_pred ceEEEECCCCCEEEEEEcCC----CeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC-----------
Confidence 35789999999877654322 4688888863 32211 111 11122467899999888765432
Q ss_pred cccCCcEEEEEECCCCCC-CC--eeEEe--cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQD-KD--IPVVE--FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~-~~--~~v~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
...|+++++.+... .. ..... ....+ ..+.++|||++++.... ..+.|.+++++.
T Consensus 147 ----~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p---~~~~~~pdg~~lyv~~~---~~~~v~v~~~~~ 206 (330)
T PRK11028 147 ----EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGP---RHMVFHPNQQYAYCVNE---LNSSVDVWQLKD 206 (330)
T ss_pred ----CCEEEEEEECCCCcccccCCCceecCCCCCC---ceEEECCCCCEEEEEec---CCCEEEEEEEeC
Confidence 23688888865221 00 00011 11122 35799999999876532 226788888764
No 219
>KOG1446|consensus
Probab=98.35 E-value=9e-05 Score=72.04 Aligned_cols=225 Identities=12% Similarity=0.168 Sum_probs=138.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
+++.-+.|--....+.+++. . +..+|+..++.+.+.++--.+.. .+.++.-||-+..+.-.+.|.
T Consensus 57 yG~~~~~Fth~~~~~i~sSt-k--~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~----------- 122 (311)
T KOG1446|consen 57 YGVDLACFTHHSNTVIHSST-K--EDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDK----------- 122 (311)
T ss_pred ccccEEEEecCCceEEEccC-C--CCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCC-----------
Confidence 45566677666666777665 2 33689999999988765433322 346888899887777666544
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|++|++.+..-+-++.... .+ -+++.|.|-.+|+... ...|.++|+..-. ..|.....
T Consensus 123 -----tvrLWDlR~~~cqg~l~~~~--~p----i~AfDp~GLifA~~~~----~~~IkLyD~Rs~d------kgPF~tf~ 181 (311)
T KOG1446|consen 123 -----TVRLWDLRVKKCQGLLNLSG--RP----IAAFDPEGLIFALANG----SELIKLYDLRSFD------KGPFTTFS 181 (311)
T ss_pred -----eEEeeEecCCCCceEEecCC--Cc----ceeECCCCcEEEEecC----CCeEEEEEecccC------CCCceeEc
Confidence 78999998765443332222 12 3789999987775432 2488999987622 23333322
Q ss_pred --ccccceEE-E-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 301 --PGMDHHHE-I-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 301 --~~~~~~~~-~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
.+....+. . |||||+.|++.++. ..++++|.=.+....-...-+......++....++ +.+++....+ .
T Consensus 182 i~~~~~~ew~~l~FS~dGK~iLlsT~~----s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPd-s~Fvl~gs~d--g 254 (311)
T KOG1446|consen 182 ITDNDEAEWTDLEFSPDGKSILLSTNA----SFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPD-SKFVLSGSDD--G 254 (311)
T ss_pred cCCCCccceeeeEEcCCCCEEEEEeCC----CcEEEEEccCCcEeeeEeeccCCCCcceeEEECCC-CcEEEEecCC--C
Confidence 12233343 2 99999999988775 24788886555410001111222122233343344 7777777666 4
Q ss_pred eEEEEECCCCceeeeeCCC-CceEEeeccCccc
Q psy4818 377 VMDLHDLNTGKRLHSFPLD-LGQITHISGRRKY 408 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~ 408 (734)
.|.+|++++|+....+..+ .+.+..+-++|..
T Consensus 255 ~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~ 287 (311)
T KOG1446|consen 255 TIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRY 287 (311)
T ss_pred cEEEEEcCCCcEeeEecCCCCCCccccccCCce
Confidence 7999999999877777665 4445555566654
No 220
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.33 E-value=1.3e-05 Score=80.98 Aligned_cols=120 Identities=13% Similarity=0.061 Sum_probs=74.7
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch-----hhhc-----cc
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED-----WHNA-----GR 541 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~-----~~~~-----~~ 541 (734)
....++.|+.. .....|++|++.|-...............++. .|++-+++..+- ||.. +... ..
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~-~gi~s~~le~Py---yg~RkP~~Q~~s~l~~VsDl 151 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLK-EGIASLILENPY---YGQRKPKDQRRSSLRNVSDL 151 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHH-cCcceEEEeccc---ccccChhHhhcccccchhHH
Confidence 34566678765 23568999998885332221111111234444 599999887654 4321 1100 00
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
...+...+.+....+.|+.++|+ .++++.|.||||.+|..+++..|.....+-+.
T Consensus 152 ~~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~l 206 (348)
T PF09752_consen 152 FVMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCL 206 (348)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEee
Confidence 11233456777788999998876 48999999999999999999988764444333
No 221
>KOG2139|consensus
Probab=98.33 E-value=0.00013 Score=72.16 Aligned_cols=117 Identities=18% Similarity=0.275 Sum_probs=76.3
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
++..+.+++|.+||..++-++-. + ..|.+||+++|..++.. .+...++.+.|||||..|+-.+.+.
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~g--s--ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da--------- 260 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASFG--S--SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA--------- 260 (445)
T ss_pred CCceeeEEEEcCCCCEEeecccC--c--ceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc---------
Confidence 35668899999999998866542 2 67999999999866544 2333346889999999998887653
Q ss_pred ccccCCcEEE-EEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 219 TTAHMGQKIY-YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 219 ~~~~~~~~l~-~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
..+|| .+.--+.. .-+. .++......|||+|++|+|..+.. ..||.+...+
T Consensus 261 -----vfrlw~e~q~wt~e---rw~l----gsgrvqtacWspcGsfLLf~~sgs---p~lysl~f~~ 312 (445)
T KOG2139|consen 261 -----VFRLWQENQSWTKE---RWIL----GSGRVQTACWSPCGSFLLFACSGS---PRLYSLTFDG 312 (445)
T ss_pred -----eeeeehhcccceec---ceec----cCCceeeeeecCCCCEEEEEEcCC---ceEEEEeecC
Confidence 12344 11111111 1111 233566789999999999986532 4566655443
No 222
>KOG0310|consensus
Probab=98.31 E-value=0.00013 Score=74.75 Aligned_cols=229 Identities=13% Similarity=0.156 Sum_probs=143.4
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+.+..|=.||+.+|- |++...+.|+|..+...+.... .........|+|++++++....|+.
T Consensus 70 ~v~s~~fR~DG~Llaa-----GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~----------- 133 (487)
T KOG0310|consen 70 VVYSVDFRSDGRLLAA-----GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDK----------- 133 (487)
T ss_pred ceeEEEeecCCeEEEc-----cCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCc-----------
Confidence 3678999999999883 5566789999966643332211 1112246678999998888776542
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.+.+|++.+.. + ..+...+..++...+|+|-...|+++.+ ....|.+||+... ..+..-.+
T Consensus 134 ----v~k~~d~s~a~---v-~~~l~~htDYVR~g~~~~~~~hivvtGs---YDg~vrl~DtR~~--------~~~v~eln 194 (487)
T KOG0310|consen 134 ----VVKYWDLSTAY---V-QAELSGHTDYVRCGDISPANDHIVVTGS---YDGKVRLWDTRSL--------TSRVVELN 194 (487)
T ss_pred ----eEEEEEcCCcE---E-EEEecCCcceeEeeccccCCCeEEEecC---CCceEEEEEeccC--------CceeEEec
Confidence 56778887764 2 4444555668889999999999998654 3367899998771 12222222
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
........ +-|.|+.|+- .++ ..+-+||+.++. +.+.... ....+....+..+++-+++..-| .++.
T Consensus 195 hg~pVe~vl~lpsgs~ias----AgG-n~vkVWDl~~G~----qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD--~~VK 263 (487)
T KOG0310|consen 195 HGCPVESVLALPSGSLIAS----AGG-NSVKVWDLTTGG----QLLTSMFNHNKTVTCLRLASDSTRLLSGSLD--RHVK 263 (487)
T ss_pred CCCceeeEEEcCCCCEEEE----cCC-CeEEEEEecCCc----eehhhhhcccceEEEEEeecCCceEeecccc--cceE
Confidence 22222222 5677776652 122 348889998664 3333322 23445555555445666666555 3677
Q ss_pred EEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 380 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
+||+.+=+.+.....+ +.|-+++.++++..+++..++.
T Consensus 264 Vfd~t~~Kvv~s~~~~-~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 264 VFDTTNYKVVHSWKYP-GPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred EEEccceEEEEeeecc-cceeeEEecCCCceEEEecccc
Confidence 7886455554555444 4566888889888888876654
No 223
>KOG0265|consensus
Probab=98.30 E-value=0.00068 Score=65.54 Aligned_cols=124 Identities=15% Similarity=0.101 Sum_probs=79.3
Q ss_pred CCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc-c-cccccccccCeeEEEcCCcEEEEEEEecC
Q psy4818 133 PNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-Y-PEVLKNVKFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 133 ~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~-~-~~~~~~~~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
|...-.++...+....|+|||..+| +|.-..+|++|++.+... . ........+..+.|++|++.|+-+..|.
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~a-----SgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk- 112 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFA-----SGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK- 112 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEe-----ecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCc-
Confidence 3333345556688899999999988 333457899999765431 1 1111222236789999999888776543
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
+|+.|+..+++. ++....+..+...+.-+.-|-.|+.+.+ +...+.+||+.+
T Consensus 113 ---------------~v~~wD~~tG~~----~rk~k~h~~~vNs~~p~rrg~~lv~Sgs---dD~t~kl~D~R~ 164 (338)
T KOG0265|consen 113 ---------------TVRGWDAETGKR----IRKHKGHTSFVNSLDPSRRGPQLVCSGS---DDGTLKLWDIRK 164 (338)
T ss_pred ---------------eEEEEeccccee----eehhccccceeeecCccccCCeEEEecC---CCceEEEEeecc
Confidence 789999988763 3333334445555554555667665443 336788889875
No 224
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.30 E-value=2.2e-05 Score=76.24 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=88.2
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
...+.+.+.+|..+..--++-.....+.+..+||-+||.||+...-.| +...|.+.|..++.+||+|.+.-
T Consensus 6 ~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkY---i~~~l~~~~iR~I~iN~PGf~~t------ 76 (297)
T PF06342_consen 6 RKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKY---IRPPLDEAGIRFIGINYPGFGFT------ 76 (297)
T ss_pred EEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhh---hhhHHHHcCeEEEEeCCCCCCCC------
Confidence 344566677787777666665443333445689999999999876443 45778889999999999994421
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.+.. .-...-.+-..-++.|.++--++ +++.++|||.|+-.++.++..+| . .++++..|
T Consensus 77 ~~~~-~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~-~-~g~~lin~ 135 (297)
T PF06342_consen 77 PGYP-DQQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP-L-HGLVLINP 135 (297)
T ss_pred CCCc-ccccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc-c-ceEEEecC
Confidence 1111 11222334445555566654455 78999999999999999999987 3 46666665
No 225
>KOG0275|consensus
Probab=98.30 E-value=1.3e-05 Score=77.35 Aligned_cols=228 Identities=13% Similarity=0.227 Sum_probs=137.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
+-.+.||-|...|| +|+....|.||.+.+|.++..-. ....+..+.||.|+..|+-.+++.
T Consensus 266 Vlci~FSRDsEMlA-----sGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~------------ 328 (508)
T KOG0275|consen 266 VLCISFSRDSEMLA-----SGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ------------ 328 (508)
T ss_pred eEEEeecccHHHhh-----ccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccc------------
Confidence 55788999999988 45555679999999999765211 111235789999999998877643
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.+.+|-+.++. ++-+-..+..++..+.|++||.+|+-.++ ...+.+|+..+ +.++.. +..+-.
T Consensus 329 ----tvRiHGlKSGK----~LKEfrGHsSyvn~a~ft~dG~~iisaSs----DgtvkvW~~Kt--teC~~T---fk~~~~ 391 (508)
T KOG0275|consen 329 ----TVRIHGLKSGK----CLKEFRGHSSYVNEATFTDDGHHIISASS----DGTVKVWHGKT--TECLST---FKPLGT 391 (508)
T ss_pred ----eEEEeccccch----hHHHhcCccccccceEEcCCCCeEEEecC----CccEEEecCcc--hhhhhh---ccCCCC
Confidence 67778776653 22233345667788999999999874332 25688899887 334321 111111
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--CCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED--ENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
+. ....+ .-|.+-.-+++.|+. ..+|.+++.+.. ++....+. .+..+.....+.++.+|... ++ ..+
T Consensus 392 d~-~vnsv~~~PKnpeh~iVCNrs---ntv~imn~qGQv---VrsfsSGkREgGdFi~~~lSpkGewiYcig-ED--~vl 461 (508)
T KOG0275|consen 392 DY-PVNSVILLPKNPEHFIVCNRS---NTVYIMNMQGQV---VRSFSSGKREGGDFINAILSPKGEWIYCIG-ED--GVL 461 (508)
T ss_pred cc-cceeEEEcCCCCceEEEEcCC---CeEEEEeccceE---EeeeccCCccCCceEEEEecCCCcEEEEEc-cC--cEE
Confidence 11 11111 335444455667763 358899887643 23333322 13344555556655666544 44 368
Q ss_pred EEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEe
Q psy4818 379 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 379 ~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~s 416 (734)
|-++..+|+..+.++...-.+.++.-.|..+ ++.+|+
T Consensus 462 YCF~~~sG~LE~tl~VhEkdvIGl~HHPHqN-llAsYs 498 (508)
T KOG0275|consen 462 YCFSVLSGKLERTLPVHEKDVIGLTHHPHQN-LLASYS 498 (508)
T ss_pred EEEEeecCceeeeeecccccccccccCcccc-hhhhhc
Confidence 8888878987677765433344565555443 433443
No 226
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.29 E-value=0.0001 Score=75.88 Aligned_cols=165 Identities=16% Similarity=0.113 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHHcCCC--CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc-ccc-ccc------------
Q psy4818 549 FDDFQAAAEYMINKKYT--KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML-RFN-KFT------------ 612 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~--d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-~~~-~~~------------ 612 (734)
.-|++.|+.+|+++-.. +.-++..+|+|+||||+..++.-+|..|.+++-.++.+-.. ++. ...
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~ 242 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEF 242 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccc
Confidence 46888888888876322 23489999999999999999999999999999776643221 110 000
Q ss_pred -----------cCcccccccCCCC--CHHHHHHHHhCCccCCCCCCCCCc-cCCcEEEEecCCCCCCCChHHHHHHHHHH
Q psy4818 613 -----------IAYYSESEFGSPN--NKTHFHNLLSYSPLHNIKVPPNNT-QYPATLVLTGDHDDRVPPLHSYKFIATLQ 678 (734)
Q Consensus 613 -----------~~~~~~~~~g~~~--~~~~~~~~~~~sp~~~~~~p~~~~-~~P~~Li~~g~~D~~v~~~~~~~~~~~L~ 678 (734)
....|...-+.|. ..+.+ .++..--..++.... .. +-|-....|+..|+.+|+.+-.++++.|+
T Consensus 243 ~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~-~IR~iLn~~HL~iqs-~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~ 320 (403)
T PF11144_consen 243 FNFKNIRIYCFDKTFWTRNKNSPYYFSKARY-IIRSILNPDHLKIQS-NYNKKIIYVSYHSIKDDLAPAEDKEELYEILK 320 (403)
T ss_pred cccCCEEEEEEeccccccCCCCccccChHHH-HHHHhcChHHHHHHH-hcccceEEEEEeccCCCCCCHHHHHHHHHHHH
Confidence 0112333223331 11111 122111111111000 00 11336778999999999999999999999
Q ss_pred hhhCCCCCCCCcEEEEEe-----------CCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 679 EKIGSLPYQKNPLLLRVE-----------QDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~-----------~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+. |-.++++.. .+-.||++-+. .......+.-+.+.+
T Consensus 321 ~l-------gfda~l~lIkdes~iDGkfIKnl~HGmgis~---k~Lf~KeLp~~lek~ 368 (403)
T PF11144_consen 321 NL-------GFDATLHLIKDESEIDGKFIKNLEHGMGISD---KALFKKELPLMLEKL 368 (403)
T ss_pred Hc-------CCCeEEEEecChhhccchheeccccCCCCCH---HHHHHHHhHHHHHHh
Confidence 99 888888777 44578876442 233444455555554
No 227
>KOG0283|consensus
Probab=98.28 E-value=0.00012 Score=79.97 Aligned_cols=174 Identities=10% Similarity=0.123 Sum_probs=93.9
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 304 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~ 304 (734)
.|.+|.++... =+.+|.. ..|+..++|.| |.+|++ ++.-...+.+|++... ++ ..|. +-.+
T Consensus 391 TVRLWh~~~~~--CL~~F~H---ndfVTcVaFnPvDDryFi----SGSLD~KvRiWsI~d~---~V---v~W~---Dl~~ 452 (712)
T KOG0283|consen 391 TVRLWHPGRKE--CLKVFSH---NDFVTCVAFNPVDDRYFI----SGSLDGKVRLWSISDK---KV---VDWN---DLRD 452 (712)
T ss_pred cEEeecCCCcc--eeeEEec---CCeeEEEEecccCCCcEe----ecccccceEEeecCcC---ee---Eeeh---hhhh
Confidence 67888887653 4557764 34899999999 566654 2233368888988761 11 1111 1112
Q ss_pred ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC-CceEeecCC---CCceeEEEEEeeC--CEEEEEEEeCCcee
Q psy4818 305 HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPED---ENRTLDVVAAVAN--NKLIVHYIQNVRSV 377 (734)
Q Consensus 305 ~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~---~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 377 (734)
..... ++|||+..++-+-. +....++..+.... .+..-.... ....+.++.+..+ +.++|+. .| ++
T Consensus 453 lITAvcy~PdGk~avIGt~~----G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTS-nD--Sr 525 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFN----GYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTS-ND--SR 525 (712)
T ss_pred hheeEEeccCCceEEEEEec----cEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEec-CC--Cc
Confidence 22233 89999877765542 33555555443210 011111110 0123555554432 3455554 33 68
Q ss_pred EEEEECCCCceeeeeCCC---CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLD---LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~---~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|.++|+.+-+.+..+... ...+ ..+++.|++.++... . -..+|+|+.
T Consensus 526 IRI~d~~~~~lv~KfKG~~n~~SQ~-~Asfs~Dgk~IVs~s-e---Ds~VYiW~~ 575 (712)
T KOG0283|consen 526 IRIYDGRDKDLVHKFKGFRNTSSQI-SASFSSDGKHIVSAS-E---DSWVYIWKN 575 (712)
T ss_pred eEEEeccchhhhhhhcccccCCcce-eeeEccCCCEEEEee-c---CceEEEEeC
Confidence 999998666655566543 2223 445556777665443 2 247999988
No 228
>PRK04940 hypothetical protein; Provisional
Probab=98.28 E-value=1.3e-05 Score=73.65 Aligned_cols=119 Identities=13% Similarity=0.037 Sum_probs=74.7
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPN 647 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~ 647 (734)
++++|+|.|+|||.|.+++.++. . -+|+..|.+.....+..-++. ..+|. ...++..+.++ ++.|+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~--~aVLiNPAv~P~~~L~~~ig~--~~~y~-~~~~~h~~eL~-------~~~p~- 125 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I--RQVIFNPNLFPEENMEGKIDR--PEEYA-DIATKCVTNFR-------EKNRD- 125 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C--CEEEECCCCChHHHHHHHhCC--Ccchh-hhhHHHHHHhh-------hcCcc-
Confidence 46999999999999999999864 2 455677777654432211111 01122 12233344444 23332
Q ss_pred CccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 648 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 648 ~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
..+++..+.|.+..+.++.+.++ +. ..+.+.+|+.|.|..-. +....+++|+.
T Consensus 126 -----r~~vllq~gDEvLDyr~a~~~y~------------~~-y~~~v~~GGdH~f~~fe----~~l~~I~~F~~ 178 (180)
T PRK04940 126 -----RCLVILSRNDEVLDSQRTAEELH------------PY-YEIVWDEEQTHKFKNIS----PHLQRIKAFKT 178 (180)
T ss_pred -----cEEEEEeCCCcccCHHHHHHHhc------------cC-ceEEEECCCCCCCCCHH----HHHHHHHHHHh
Confidence 17888889999998877665543 11 14678899999997532 45667888874
No 229
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.28 E-value=0.00018 Score=76.07 Aligned_cols=221 Identities=16% Similarity=0.133 Sum_probs=106.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--------cccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------KNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--------~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
..++++||||++++.+....+ ++.++|.++.+.+.... ...+..++.-||++..+++.-.+
T Consensus 80 ~~~i~~s~DG~~~~v~n~~~~----~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd------- 148 (369)
T PF02239_consen 80 PRGIAVSPDGKYVYVANYEPG----TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD------- 148 (369)
T ss_dssp EEEEEE--TTTEEEEEEEETT----EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT-------
T ss_pred cceEEEcCCCCEEEEEecCCC----ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc-------
Confidence 467999999999987665443 69999999988654211 11233466778888876666532
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc----
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS---- 291 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~---- 291 (734)
..+|+..+...... ..+.... ...+..+..|+|||||++...... +.|-++|++++....+.
T Consensus 149 --------~~~I~vVdy~d~~~--~~~~~i~-~g~~~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k~v~~i~~g~ 214 (369)
T PF02239_consen 149 --------TGEIWVVDYSDPKN--LKVTTIK-VGRFPHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGKLVALIDTGK 214 (369)
T ss_dssp --------TTEEEEEETTTSSC--EEEEEEE---TTEEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTEEEEEEE-SS
T ss_pred --------CCeEEEEEeccccc--cceeeec-ccccccccccCcccceeeeccccc---ceeEEEeeccceEEEEeeccc
Confidence 23788888765422 2211111 122456789999999987643221 23333333331100000
Q ss_pred ----------------------------------------CCCCcee--eeccccceEE-EEEecCCeEEEEeCCCCCCc
Q psy4818 292 ----------------------------------------GKFPLKT--VIPGMDHHHE-IIANNGPELIVKTTKNAPKG 328 (734)
Q Consensus 292 ----------------------------------------~~~~~~~--l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 328 (734)
....|.. -+.....+.- ..+||++++|+-+..+....
T Consensus 215 ~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~ 294 (369)
T PF02239_consen 215 KPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDAD 294 (369)
T ss_dssp SBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT
T ss_pred cccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCc
Confidence 0000000 0111111111 25788888777533222245
Q ss_pred eEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 329 KVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 329 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
.|.++|.++.+ ....+.+.. ...+-.+.+. +++.++++. .+....|.++|.++.+++++|+
T Consensus 295 ~v~viD~~tl~--~~~~i~~~~-~~~~~h~ef~~dG~~v~vS~-~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 295 TVQVIDKKTLK--VVKTITPGP-GKRVVHMEFNPDGKEVWVSV-WDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp -EEEEECCGTE--EEE-HHHHH-T--EEEEEE-TTSSEEEEEE-E--TTEEEEEETTTTEEEEEEE
T ss_pred eEEEEECcCcc--eeEEEeccC-CCcEeccEECCCCCEEEEEE-ecCCCEEEEEECCCcEEEEEEE
Confidence 68889987653 112222222 2112233444 444555554 3443489999999998887776
No 230
>KOG2382|consensus
Probab=98.28 E-value=1.3e-05 Score=79.76 Aligned_cols=214 Identities=14% Similarity=0.094 Sum_probs=112.6
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
.+.|.++.+||-.|+...| ...-..+-.+.|--|+.+|.|-+|..- +.. ........+|+..-++..... +
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw--~sv~k~Ls~~l~~~v~~vd~RnHG~Sp---~~~--~h~~~~ma~dv~~Fi~~v~~~--~ 120 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENW--RSVAKNLSRKLGRDVYAVDVRNHGSSP---KIT--VHNYEAMAEDVKLFIDGVGGS--T 120 (315)
T ss_pred CCCCceEEecccccCCCCH--HHHHHHhcccccCceEEEecccCCCCc---ccc--ccCHHHHHHHHHHHHHHcccc--c
Confidence 5788999999988876433 221122333446679999999866543 111 112222333444434333222 2
Q ss_pred CCCcEEEEEcChHH-HHHHHHHhcCCCceeEE-EE-cCCc-c--------hhcccc---ccc----cCcc----------
Q psy4818 566 KPKYITIMGGSNGG-LLVGACLNQRPELYGAA-LI-LVGA-L--------DMLRFN---KFT----IAYY---------- 616 (734)
Q Consensus 566 d~~ri~i~G~S~GG-~~~~~~~~~~p~~~~a~-v~-~~~~-~--------d~~~~~---~~~----~~~~---------- 616 (734)
--.++.|.|||||| -++++.....|++..-+ |. ..|. + ..+..+ ... .+..
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 34568999999999 55555555668754433 33 3341 0 000000 001 0000
Q ss_pred -------ccc------------cc-CCCC-CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHH
Q psy4818 617 -------SES------------EF-GSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIA 675 (734)
Q Consensus 617 -------~~~------------~~-g~~~-~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~ 675 (734)
|.. .| ++.. ..+.+..+...+.-.....+ ....| +|+++|.++..|+..+-.++.+
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~--~~~~p-vlfi~g~~S~fv~~~~~~~~~~ 277 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDG--PYTGP-VLFIKGLQSKFVPDEHYPRMEK 277 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccccc--ccccc-eeEEecCCCCCcChhHHHHHHH
Confidence 000 00 1111 11222232222322222111 15566 9999999999999876544444
Q ss_pred HHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 676 TLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 676 ~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
... .++++..+++||+...... .+...-+..|+..+
T Consensus 278 ~fp-----------~~e~~~ld~aGHwVh~E~P--~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 278 IFP-----------NVEVHELDEAGHWVHLEKP--EEFIESISEFLEEP 313 (315)
T ss_pred hcc-----------chheeecccCCceeecCCH--HHHHHHHHHHhccc
Confidence 333 3588999999999875544 35566677777654
No 231
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.26 E-value=8.5e-06 Score=82.17 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCCcEEEEecCCCCCcCCc--------cccHHHH---HHHHhcCeEEEEEecccCC--CCCchhh-hcccc---ccCCCc
Q psy4818 486 RRNPVIIYGYGGYGVSVLP--------TFSISRC---MFLRHFNGIYAIPNIRGGG--ELGEDWH-NAGRL---LKKQNC 548 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~--------~~~~~~~---~~l~~~G~~v~~~~~rG~~--~~g~~~~-~~~~~---~~~~~~ 548 (734)
.+..+||++|+-.+.+..- +|-..+. ..++-.-|-|++.|.-||+ .-|..-. ..|+. .....+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 4566888889865543221 2322110 1233345999999999875 2222111 11110 123356
Q ss_pred hhHHHHHHHHHHHcCCCCCCcE-EEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 549 FDDFQAAAEYMINKKYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~d~~ri-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
+.|.+.+-+.|+++--+ +++ +|+|+||||+.++..+..+||....+|..+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 88999988888776333 345 4999999999999999999998776666554
No 232
>KOG0296|consensus
Probab=98.24 E-value=0.00019 Score=71.06 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=102.4
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
++.++-.++.+|+.+++| .|++...-++|++.+|+..- .+...-.+....||.||..|+-....
T Consensus 63 H~~svFavsl~P~~~l~a-----TGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdms---------- 127 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNNLVA-----TGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMS---------- 127 (399)
T ss_pred cCCceEEEEeCCCCceEE-----ecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCC----------
Confidence 455677899999888777 34455678999999998432 22222234788999999876654332
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.+|.+++..++..+- .+..+-+ -+..+.|.|-+..|+.- .....+|+|.+..+ ..-+
T Consensus 128 ------G~v~v~~~stg~~~~-~~~~e~~---dieWl~WHp~a~illAG----~~DGsvWmw~ip~~---------~~~k 184 (399)
T KOG0296|consen 128 ------GKVLVFKVSTGGEQW-KLDQEVE---DIEWLKWHPRAHILLAG----STDGSVWMWQIPSQ---------ALCK 184 (399)
T ss_pred ------ccEEEEEcccCceEE-EeecccC---ceEEEEecccccEEEee----cCCCcEEEEECCCc---------ceee
Confidence 268888888775432 2332222 23457899988777643 23367999998772 1233
Q ss_pred eeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 299 VIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 299 l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
+..+...... -+.|||++++-... ++.|.+|+++++.
T Consensus 185 v~~Gh~~~ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 185 VMSGHNSPCTCGEFIPDGKRILTGYD----DGTIIVWNPKTGQ 223 (399)
T ss_pred EecCCCCCcccccccCCCceEEEEec----CceEEEEecCCCc
Confidence 4444333222 28999999886554 4569999999875
No 233
>KOG1407|consensus
Probab=98.20 E-value=0.00016 Score=68.43 Aligned_cols=219 Identities=11% Similarity=0.031 Sum_probs=123.3
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec--CCCCeeEEEEEEecCCcEEEEEE
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF--PNGRSLGLHSEVTDCGRYLLVST 268 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~--~~~~~~~~~~~~SpDG~~l~~~~ 268 (734)
.+++|.-||..++-.+++. .+.++++.... +..+. ..+...+.++.|+|-..-+++++
T Consensus 24 ~Sv~wn~~g~~lasgs~dk----------------tv~v~n~e~~r----~~~~~~~~gh~~svdql~w~~~~~d~~ata 83 (313)
T KOG1407|consen 24 HSVAWNCDGTKLASGSFDK----------------TVSVWNLERDR----FRKELVYRGHTDSVDQLCWDPKHPDLFATA 83 (313)
T ss_pred eEEEEcccCceeeecccCC----------------ceEEEEecchh----hhhhhcccCCCcchhhheeCCCCCcceEEe
Confidence 6899999999999888754 23344443221 11111 11222445678988877777665
Q ss_pred ecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 269 SNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 269 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
+. ...|.+||...+ .+...+....+.....|+|+|+++++..+. ..|..+|..+-. .+-.
T Consensus 84 s~---dk~ir~wd~r~~--------k~~~~i~~~~eni~i~wsp~g~~~~~~~kd----D~it~id~r~~~-----~~~~ 143 (313)
T KOG1407|consen 84 SG---DKTIRIWDIRSG--------KCTARIETKGENINITWSPDGEYIAVGNKD----DRITFIDARTYK-----IVNE 143 (313)
T ss_pred cC---CceEEEEEeccC--------cEEEEeeccCcceEEEEcCCCCEEEEecCc----ccEEEEEecccc-----eeeh
Confidence 43 257888998773 222223222333344599999999876554 247778876533 1111
Q ss_pred -CCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 349 -EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 349 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
+....+.+-.+. ..+.++|..+..|. +.++...+-|.++.|.........+.++|+|+++++..+.. .+-++
T Consensus 144 ~~~~~e~ne~~w~-~~nd~Fflt~GlG~--v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADA----lvSLW 216 (313)
T KOG1407|consen 144 EQFKFEVNEISWN-NSNDLFFLTNGLGC--VEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADA----LVSLW 216 (313)
T ss_pred hcccceeeeeeec-CCCCEEEEecCCce--EEEEeccccccccccccCCcceEEEEECCCCceEeeccccc----eeecc
Confidence 111223333333 33677777655444 44444445666677776644444788899998887654332 45677
Q ss_pred eCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcE
Q psy4818 428 NIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTR 471 (734)
Q Consensus 428 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 471 (734)
|+. ++.-++ -+..-++.++.+.| |.||+.
T Consensus 217 D~~---------ELiC~R-----~isRldwpVRTlSF-S~dg~~ 245 (313)
T KOG1407|consen 217 DVD---------ELICER-----CISRLDWPVRTLSF-SHDGRM 245 (313)
T ss_pred Chh---------Hhhhhe-----eeccccCceEEEEe-ccCcce
Confidence 771 122111 13344556677766 456653
No 234
>KOG0973|consensus
Probab=98.14 E-value=6.4e-05 Score=84.34 Aligned_cols=123 Identities=11% Similarity=-0.042 Sum_probs=77.5
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..+.||||++++|-.. -.+.|.+||..+.+.+....+.. .+-+++|-|=||+|+-.++|.
T Consensus 129 ~~DV~Dv~Wsp~~~~lvS~s-----~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr---------- 193 (942)
T KOG0973|consen 129 DSDVLDVNWSPDDSLLVSVS-----LDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR---------- 193 (942)
T ss_pred CCccceeccCCCccEEEEec-----ccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc----------
Confidence 34477899999999988433 33679999999886554333222 346899999999998877643
Q ss_pred cccCCcEEEEEECCCCCCCCe--eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDI--PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~--~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.|.+|+...-+-+.. -.|++.....++..++|||||++|+....-....+-+-+++-++
T Consensus 194 ------tikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~t 254 (942)
T KOG0973|consen 194 ------TLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGT 254 (942)
T ss_pred ------eEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCC
Confidence 455555433111110 12222222347888999999999985433322335556665544
No 235
>KOG0305|consensus
Probab=98.13 E-value=0.0002 Score=76.08 Aligned_cols=248 Identities=15% Similarity=0.100 Sum_probs=147.0
Q ss_pred EeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEe
Q psy4818 130 FLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYC 208 (734)
Q Consensus 130 l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~ 208 (734)
++|...+..+ +.+.-+.|| ....||.+.. ..+|+|+..+|+.+..... ...+.++.|++||+.|+....+
T Consensus 168 vLDaP~l~dD--fY~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~ 238 (484)
T KOG0305|consen 168 VLDAPGLQDD--FYLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSD 238 (484)
T ss_pred hccCCccccc--HhhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecC
Confidence 4554444322 335568899 5556887763 4799999999986543322 3345799999999999988764
Q ss_pred cCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCC
Q psy4818 209 DINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 288 (734)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~ 288 (734)
. .|.++++.+..... -+... +...+..++|. ..++.... ....|..+|+.... .
T Consensus 239 g----------------~v~iwD~~~~k~~~--~~~~~-h~~rvg~laW~---~~~lssGs---r~~~I~~~dvR~~~-~ 292 (484)
T KOG0305|consen 239 G----------------TVQIWDVKEQKKTR--TLRGS-HASRVGSLAWN---SSVLSSGS---RDGKILNHDVRISQ-H 292 (484)
T ss_pred C----------------eEEEEehhhccccc--cccCC-cCceeEEEecc---CceEEEec---CCCcEEEEEEecch-h
Confidence 3 68888877643221 11111 34466778887 22332222 22466777776511 0
Q ss_pred cccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEE
Q psy4818 289 KISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKL 366 (734)
Q Consensus 289 ~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l 366 (734)
....+..+....-. -|++|+..++- ++.+..++.+|..... ....+..+. ..+..+.| +-...+
T Consensus 293 ------~~~~~~~H~qeVCgLkws~d~~~lAS----GgnDN~~~Iwd~~~~~--p~~~~~~H~--aAVKA~awcP~q~~l 358 (484)
T KOG0305|consen 293 ------VVSTLQGHRQEVCGLKWSPDGNQLAS----GGNDNVVFIWDGLSPE--PKFTFTEHT--AAVKALAWCPWQSGL 358 (484)
T ss_pred ------hhhhhhcccceeeeeEECCCCCeecc----CCCccceEeccCCCcc--ccEEEeccc--eeeeEeeeCCCccCc
Confidence 01111112222112 29999988773 3445679999985443 245555555 23333322 222456
Q ss_pred EEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 367 IVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 367 ~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+++........|..||..+|+.+..+... ..|.++.+++..++++.++.-.. .++.+|+.
T Consensus 359 LAsGGGs~D~~i~fwn~~~g~~i~~vdtg-sQVcsL~Wsk~~kEi~sthG~s~--n~i~lw~~ 418 (484)
T KOG0305|consen 359 LATGGGSADRCIKFWNTNTGARIDSVDTG-SQVCSLIWSKKYKELLSTHGYSE--NQITLWKY 418 (484)
T ss_pred eEEcCCCcccEEEEEEcCCCcEecccccC-CceeeEEEcCCCCEEEEecCCCC--CcEEEEec
Confidence 66655444568999999989877666543 45778889999988876654333 25555655
No 236
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.13 E-value=8.9e-05 Score=77.64 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=65.8
Q ss_pred CCCcEEEE----ecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHH
Q psy4818 486 RRNPVIIY----GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 561 (734)
Q Consensus 486 ~~~P~vv~----~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 561 (734)
.+.|.||. +|| ++...... ...+...|. .|.-|..+-+.--.+ ...+++|+..+....++
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~-~GHPvYFV~F~p~P~-------------pgQTl~DV~~ae~~Fv~ 130 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALR-AGHPVYFVGFFPEPE-------------PGQTLEDVMRAEAAFVE 130 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHH-cCCCeEEEEecCCCC-------------CCCcHHHHHHHHHHHHH
Confidence 56787777 676 23332222 223445565 498877776653222 22367788776443333
Q ss_pred c---CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEE-EEcCCcchh
Q psy4818 562 K---KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA-LILVGALDM 605 (734)
Q Consensus 562 ~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~-v~~~~~~d~ 605 (734)
+ -.-+..|..++|...||++++.+++.+|+++.-+ ++.+|+.-|
T Consensus 131 ~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 131 EVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred HHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcccc
Confidence 2 1223348999999999999999999999998754 567776543
No 237
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.09 E-value=0.00016 Score=65.01 Aligned_cols=123 Identities=18% Similarity=0.223 Sum_probs=85.7
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccccccc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF 621 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 621 (734)
..+....++|.++.++.-+..- ++.+.+++||.|+.+++..+.+.-..++++++.+|.- ..+
T Consensus 36 ~~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~-------------- 97 (181)
T COG3545 36 DDWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSR-------------- 97 (181)
T ss_pred CCCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccc--------------
Confidence 3566677899988877655542 4459999999999999999887555678888877743 111
Q ss_pred CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCC
Q psy4818 622 GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGH 701 (734)
Q Consensus 622 g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH 701 (734)
+. .....+..++|+...+ ...| .+++++.||+.|+++++..+++++-.. ++....+||
T Consensus 98 --~~--~~~~~~~tf~~~p~~~-----lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~------------lv~~g~~GH 155 (181)
T COG3545 98 --PE--IRPKHLMTFDPIPREP-----LPFP-SVVVASRNDPYVSYEHAEDLANAWGSA------------LVDVGEGGH 155 (181)
T ss_pred --cc--cchhhccccCCCcccc-----CCCc-eeEEEecCCCCCCHHHHHHHHHhccHh------------heecccccc
Confidence 00 0011223445544443 3345 899999999999999999999988765 666678888
Q ss_pred CCC
Q psy4818 702 GQG 704 (734)
Q Consensus 702 ~~~ 704 (734)
...
T Consensus 156 iN~ 158 (181)
T COG3545 156 INA 158 (181)
T ss_pred cch
Confidence 543
No 238
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.07 E-value=0.0027 Score=75.08 Aligned_cols=237 Identities=13% Similarity=0.123 Sum_probs=124.3
Q ss_pred EEeeEEeCCC-CcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEc-CCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTH-DHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~SPD-G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.+..+.|+|. +++||-+. .+ ..|++||+.+++.+..... ...+..++|+| |+..|+-...+.
T Consensus 534 ~v~~l~~~~~~~~~las~~-~D----g~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg---------- 598 (793)
T PLN00181 534 KLSGICWNSYIKSQVASSN-FE----GVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG---------- 598 (793)
T ss_pred ceeeEEeccCCCCEEEEEe-CC----CeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC----------
Confidence 3567889875 56665433 22 4799999998875443222 22346889997 676665555432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE-ecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV-TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~-SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|.+|++.++.. +..+... .....+.| +++|.+|+... ....|++||+.++. .+...
T Consensus 599 ------~v~iWd~~~~~~--~~~~~~~---~~v~~v~~~~~~g~~latgs----~dg~I~iwD~~~~~-------~~~~~ 656 (793)
T PLN00181 599 ------SVKLWSINQGVS--IGTIKTK---ANICCVQFPSESGRSLAFGS----ADHKVYYYDLRNPK-------LPLCT 656 (793)
T ss_pred ------EEEEEECCCCcE--EEEEecC---CCeEEEEEeCCCCCEEEEEe----CCCeEEEEECCCCC-------ccceE
Confidence 688899876532 2222221 13456777 45788887543 22689999997621 11222
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC----CCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC----EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
+.......... |. ++..|+..+. +..|..||+.... ...+..+..+. ..+..+.+..++.++++...+
T Consensus 657 ~~~h~~~V~~v~f~-~~~~lvs~s~----D~~ikiWd~~~~~~~~~~~~l~~~~gh~--~~i~~v~~s~~~~~lasgs~D 729 (793)
T PLN00181 657 MIGHSKTVSYVRFV-DSSTLVSSST----DNTLKLWDLSMSISGINETPLHSFMGHT--NVKNFVGLSVSDGYIATGSET 729 (793)
T ss_pred ecCCCCCEEEEEEe-CCCEEEEEEC----CCEEEEEeCCCCccccCCcceEEEcCCC--CCeeEEEEcCCCCEEEEEeCC
Confidence 22222222223 54 6666554433 3458888876421 01122222222 223334444335566666665
Q ss_pred CceeEEEEECCCCceeeeeC-------------CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFP-------------LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~-------------~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+++|+...+..+.... .....|..+.+++++..++. .++. +.+.++++
T Consensus 730 --~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva-~~~d---G~I~i~~~ 792 (793)
T PLN00181 730 --NEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVA-ANST---GNIKILEM 792 (793)
T ss_pred --CEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEE-ecCC---CcEEEEec
Confidence 367888864443211110 01234667777777655443 3322 24555554
No 239
>KOG0316|consensus
Probab=98.07 E-value=0.00067 Score=63.30 Aligned_cols=224 Identities=9% Similarity=0.089 Sum_probs=127.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+-....|-|..++| .+.....+++||++||+.+..- .....+..+.|..++.-++-.+++
T Consensus 60 ~EVlD~~~s~Dnskf~-----s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD------------ 122 (307)
T KOG0316|consen 60 HEVLDAALSSDNSKFA-----SCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFD------------ 122 (307)
T ss_pred ceeeeccccccccccc-----cCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEecccc------------
Confidence 3455677888998887 3334578999999999975432 222344678886655444333443
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
..+..|+..+...+.+.++.+..+. +.++..+ +.-|+ ..+ ....+..+|+..|. +.
T Consensus 123 ----~s~r~wDCRS~s~ePiQildea~D~--V~Si~v~--~heIv-aGS---~DGtvRtydiR~G~------------l~ 178 (307)
T KOG0316|consen 123 ----SSVRLWDCRSRSFEPIQILDEAKDG--VSSIDVA--EHEIV-AGS---VDGTVRTYDIRKGT------------LS 178 (307)
T ss_pred ----ceeEEEEcccCCCCccchhhhhcCc--eeEEEec--ccEEE-eec---cCCcEEEEEeecce------------ee
Confidence 2688888887777766676654322 2233332 22222 221 12456677776531 11
Q ss_pred cc-cc-ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCcee-EEEEEeeCCEEEEEEEeCCce
Q psy4818 301 PG-MD-HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL-DVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 301 ~~-~~-~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~ 376 (734)
.+ +. +.... +|+||+-.+..+- +..|.++|-++++. ++....+. ...+ -...+...+..++..+++|
T Consensus 179 sDy~g~pit~vs~s~d~nc~La~~l----~stlrLlDk~tGkl--L~sYkGhk-n~eykldc~l~qsdthV~sgSEDG-- 249 (307)
T KOG0316|consen 179 SDYFGHPITSVSFSKDGNCSLASSL----DSTLRLLDKETGKL--LKSYKGHK-NMEYKLDCCLNQSDTHVFSGSEDG-- 249 (307)
T ss_pred hhhcCCcceeEEecCCCCEEEEeec----cceeeecccchhHH--HHHhcccc-cceeeeeeeecccceeEEeccCCc--
Confidence 11 11 12223 8999987665433 34578888777651 11111121 1111 1223333367788888885
Q ss_pred eEEEEECCCCceeeeeCCCCce-EEeeccCcccceEEEEE
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQ-ITHISGRRKYNEVFYGF 415 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~-v~~~~~~~d~~~l~~~~ 415 (734)
.+|.|||.+++.+..+..+... +.+++..|.-..+++..
T Consensus 250 ~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~ 289 (307)
T KOG0316|consen 250 KVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT 289 (307)
T ss_pred eEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec
Confidence 7999999888776666554433 45666666655555443
No 240
>KOG0645|consensus
Probab=98.06 E-value=0.0024 Score=61.00 Aligned_cols=116 Identities=11% Similarity=0.154 Sum_probs=72.7
Q ss_pred EEEeeEEeCCC-CcEEEEEEeCCCCceEEEEEEECCCCCcc--cccc---cccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDY--PEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPD-G~~la~~~~~~g~~~~~l~v~dl~~g~~~--~~~~---~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
..+-.++|+|- |..||- ++....|+++++.++... ...+ ..-.+.+++|||.|+.|+-.+++.
T Consensus 15 ~r~W~~awhp~~g~ilAs-----cg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~------ 83 (312)
T KOG0645|consen 15 DRVWSVAWHPGKGVILAS-----CGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA------ 83 (312)
T ss_pred CcEEEEEeccCCceEEEe-----ecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc------
Confidence 35778999998 886662 234468999998864421 1111 111246899999999999888865
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+-++.-..+.-+-+.+.++.++ -+-.++||++|++||--+ + ...+|+|..+.
T Consensus 84 ----------t~~Iw~k~~~efecv~~lEGHEn--EVK~Vaws~sG~~LATCS-R---DKSVWiWe~de 136 (312)
T KOG0645|consen 84 ----------TVVIWKKEDGEFECVATLEGHEN--EVKCVAWSASGNYLATCS-R---DKSVWIWEIDE 136 (312)
T ss_pred ----------eEEEeecCCCceeEEeeeecccc--ceeEEEEcCCCCEEEEee-C---CCeEEEEEecC
Confidence 23333333222222334444332 245789999999999532 2 26799998875
No 241
>KOG4497|consensus
Probab=98.03 E-value=7.6e-05 Score=72.65 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=89.2
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
-.+|||+|++||-.++ +.+.+.|..|=+..+.-.--..+..+.|+.|+-.|.-....++
T Consensus 13 ~c~fSp~g~yiAs~~~------yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~--------------- 71 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSR------YRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDP--------------- 71 (447)
T ss_pred ceeECCCCCeeeeeee------eEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccc---------------
Confidence 3689999999997664 6899999888765442211112367899999988887765331
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
.|..+++....- ..-.++ ++.-....+||||||.|+.++. ...+|-+|.+.+... .++.....
T Consensus 72 ~vqvwsl~Qpew--~ckIde--g~agls~~~WSPdgrhiL~tse---F~lriTVWSL~t~~~----------~~~~~pK~ 134 (447)
T KOG4497|consen 72 KVQVWSLVQPEW--YCKIDE--GQAGLSSISWSPDGRHILLTSE---FDLRITVWSLNTQKG----------YLLPHPKT 134 (447)
T ss_pred eEEEEEeeccee--EEEecc--CCCcceeeeECCCcceEeeeec---ceeEEEEEEecccee----------EEeccccc
Confidence 566676654321 111122 1223456899999999987542 237888899887211 11111111
Q ss_pred e--EEEEEecCCeEEEEeCCCC
Q psy4818 306 H--HEIIANNGPELIVKTTKNA 325 (734)
Q Consensus 306 ~--~~~~s~dg~~l~~~s~~~~ 325 (734)
. ...+.+||+...+.+.++-
T Consensus 135 ~~kg~~f~~dg~f~ai~sRrDC 156 (447)
T KOG4497|consen 135 NVKGYAFHPDGQFCAILSRRDC 156 (447)
T ss_pred CceeEEECCCCceeeeeecccH
Confidence 1 1128899999998887753
No 242
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.03 E-value=5.5e-05 Score=78.05 Aligned_cols=232 Identities=15% Similarity=0.106 Sum_probs=122.7
Q ss_pred cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--ccCCCCCchhhhccccccCCC
Q psy4818 470 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 470 ~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~~~~g~~~~~~~~~~~~~~ 547 (734)
..+.+.++.|++....++.|.++..||.......... ....++..++.++..+. +|....-........ .
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~ 102 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLG---YAVLLAEKGYRVLAGDASLFGESGGDPRGLADSE-----G 102 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcch---HHHHhhhceeEEeeeccccccccccccccccCcc-----c
Confidence 6688889988875444689999999997554433221 34556666888777664 111111000000000 0
Q ss_pred chhHHHHHHHHHHHc---------CCCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCCcchhcccccc----
Q psy4818 548 CFDDFQAAAEYMINK---------KYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALDMLRFNKF---- 611 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~---------~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d~~~~~~~---- 611 (734)
...++.......... .....++....|.+.||..+...+...+ +..+.++...++-........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~ 182 (299)
T COG1073 103 YAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANP 182 (299)
T ss_pred cccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccch
Confidence 011111111110000 0112357788888888888888776655 222222222221111100000
Q ss_pred ----ccCccccc-----c-------cCCCCCHHHHHHHHhCCccCCCCCCCCCcc-CCcEEEEecCCCCCCCChHHHHHH
Q psy4818 612 ----TIAYYSES-----E-------FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLHSYKFI 674 (734)
Q Consensus 612 ----~~~~~~~~-----~-------~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~-~P~~Li~~g~~D~~v~~~~~~~~~ 674 (734)
........ . +..+.. . ...+...++...+.. +. .| +|++||..|..||..++..++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~d~~~~~~~----i~~~P-~l~~~G~~D~~vp~~~~~~~~ 255 (299)
T COG1073 183 ELARELIDYLITPGGFAPLPAPEAPLDTLPL-R-AVLLLLLDPFDDAEK----ISPRP-VLLVHGERDEVVPLRDAEDLY 255 (299)
T ss_pred HHHHhhhhhhccCCCCCCCCccccccccccc-c-hhhhccCcchhhHhh----cCCcc-eEEEecCCCcccchhhhHHHH
Confidence 00000000 0 000000 1 112445556666554 33 45 999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch-HHhHHHHHHHHHHHHHHc
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL-MKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l 725 (734)
.+.+.. +....++++++|...... ....+...++..||.++|
T Consensus 256 ~~~~~~---------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 256 EAARER---------PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhhccC---------CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 887642 567788899999887422 212367778899998876
No 243
>KOG0295|consensus
Probab=98.03 E-value=0.00073 Score=67.01 Aligned_cols=248 Identities=14% Similarity=0.117 Sum_probs=146.9
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-cccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
+++.++..++++..|++||-.+.+ ..+.+||.++-. .+.... .....+.+.+-|-|..|+-...|.
T Consensus 148 GHt~sv~di~~~a~Gk~l~tcSsD-----l~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~------- 215 (406)
T KOG0295|consen 148 GHTDSVFDISFDASGKYLATCSSD-----LSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDN------- 215 (406)
T ss_pred ccccceeEEEEecCccEEEecCCc-----cchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeeccccc-------
Confidence 455668899999999998865532 347888877632 222111 222347888889998887665443
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCC-cccCC-C
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KISGK-F 294 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~ 294 (734)
.|..|+++++- .+..-+.++.|+..+..+-||..++ +.+....|.+|-++++... .++.. -
T Consensus 216 ---------tik~We~~tg~----cv~t~~~h~ewvr~v~v~~DGti~A----s~s~dqtl~vW~~~t~~~k~~lR~hEh 278 (406)
T KOG0295|consen 216 ---------TIKAWECDTGY----CVKTFPGHSEWVRMVRVNQDGTIIA----SCSNDQTLRVWVVATKQCKAELREHEH 278 (406)
T ss_pred ---------ceeEEecccce----eEEeccCchHhEEEEEecCCeeEEE----ecCCCceEEEEEeccchhhhhhhcccc
Confidence 68888988875 3445455667888899999999877 2233467888888773211 11111 1
Q ss_pred CceeeeccccceEEE---E--EecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEE
Q psy4818 295 PLKTVIPGMDHHHEI---I--ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 295 ~~~~l~~~~~~~~~~---~--s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 369 (734)
+...+.-.....++. - +-+|..+.+...+ +..|-.||+.++. -+-+|..++ .-+.++.+..+++.+++
T Consensus 279 ~vEci~wap~~~~~~i~~at~~~~~~~~l~s~Sr---DktIk~wdv~tg~--cL~tL~ghd--nwVr~~af~p~Gkyi~S 351 (406)
T KOG0295|consen 279 PVECIAWAPESSYPSISEATGSTNGGQVLGSGSR---DKTIKIWDVSTGM--CLFTLVGHD--NWVRGVAFSPGGKYILS 351 (406)
T ss_pred ceEEEEecccccCcchhhccCCCCCccEEEeecc---cceEEEEeccCCe--EEEEEeccc--ceeeeeEEcCCCeEEEE
Confidence 111111000011111 1 1123334444333 3457788988875 134454444 44566666665777777
Q ss_pred EEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEE
Q psy4818 370 YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 426 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~ 426 (734)
..+| ..|.+||++++.....+..+..-+..+.+..+. .++...+-.++..++.
T Consensus 352 caDD--ktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~--p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 352 CADD--KTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 404 (406)
T ss_pred EecC--CcEEEEEeccceeeeccCCCcceeEEEecCCCC--ceEEeccccceeeeee
Confidence 7776 468999998888777777666666666654333 3445555556655554
No 244
>KOG0295|consensus
Probab=98.02 E-value=0.00084 Score=66.58 Aligned_cols=240 Identities=10% Similarity=0.012 Sum_probs=139.8
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..++...-+.|+--.++-++ +..+|+++|..+|+...-..+.. ....++++.-||.|+-++.+-
T Consensus 108 r~~vt~v~~hp~~~~v~~as-----~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl---------- 172 (406)
T KOG0295|consen 108 RSSVTRVIFHPSEALVVSAS-----EDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL---------- 172 (406)
T ss_pred ccceeeeeeccCceEEEEec-----CCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc----------
Confidence 35566777788776555433 44789999999998643222222 135788888898887766532
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.+.+|+.++........ ..+...+..+.+-|-|.+|+ +....+.|..|++++|.. ...+
T Consensus 173 ------~~~LWd~~~~~~c~ks~---~gh~h~vS~V~f~P~gd~il----S~srD~tik~We~~tg~c--------v~t~ 231 (406)
T KOG0295|consen 173 ------SAKLWDFDTFFRCIKSL---IGHEHGVSSVFFLPLGDHIL----SCSRDNTIKAWECDTGYC--------VKTF 231 (406)
T ss_pred ------chhheeHHHHHHHHHHh---cCcccceeeEEEEecCCeee----ecccccceeEEeccccee--------EEec
Confidence 25666666532111111 12223456788889998876 222336889999998432 2222
Q ss_pred eccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE---------------eeCC
Q psy4818 300 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA---------------VANN 364 (734)
Q Consensus 300 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~---------------~~~~ 364 (734)
....+ -+..+.+.++..++.+.. ....|-+|-++++. ++.++.+. ..+++-+.+ .++.
T Consensus 232 ~~h~e-wvr~v~v~~DGti~As~s--~dqtl~vW~~~t~~---~k~~lR~h-Eh~vEci~wap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 232 PGHSE-WVRMVRVNQDGTIIASCS--NDQTLRVWVVATKQ---CKAELREH-EHPVECIAWAPESSYPSISEATGSTNGG 304 (406)
T ss_pred cCchH-hEEEEEecCCeeEEEecC--CCceEEEEEeccch---hhhhhhcc-ccceEEEEecccccCcchhhccCCCCCc
Confidence 22222 222344444445554443 24457777776653 12222222 111111111 1223
Q ss_pred EEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+.+..++| ..+..||+.+|..+-.|......|.++.++|.|+ +++++.... .+..||+
T Consensus 305 ~~l~s~SrD--ktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gk-yi~ScaDDk---tlrvwdl 363 (406)
T KOG0295|consen 305 QVLGSGSRD--KTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGK-YILSCADDK---TLRVWDL 363 (406)
T ss_pred cEEEeeccc--ceEEEEeccCCeEEEEEecccceeeeeEEcCCCe-EEEEEecCC---cEEEEEe
Confidence 566666666 4788999999998777776667788888988774 556666554 6888888
No 245
>KOG0282|consensus
Probab=98.02 E-value=4.7e-05 Score=77.85 Aligned_cols=232 Identities=13% Similarity=0.122 Sum_probs=130.3
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
+...+..+.||++|+.+.-++ -...|.+||++||+.+..-..+....-+.+-||+.-++++..-
T Consensus 257 H~k~Vrd~~~s~~g~~fLS~s-----fD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~s----------- 320 (503)
T KOG0282|consen 257 HRKPVRDASFNNCGTSFLSAS-----FDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGS----------- 320 (503)
T ss_pred chhhhhhhhccccCCeeeeee-----cceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecC-----------
Confidence 345578899999999876433 2367999999999976533233333567889999767766532
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
..+|..|++.++.. +.+-..+-+-+..+.|-++|++.+-++. .+.+.+|+.... .+.. .
T Consensus 321 ----d~ki~~wDiRs~kv----vqeYd~hLg~i~~i~F~~~g~rFissSD----dks~riWe~~~~--------v~ik-~ 379 (503)
T KOG0282|consen 321 ----DKKIRQWDIRSGKV----VQEYDRHLGAILDITFVDEGRRFISSSD----DKSVRIWENRIP--------VPIK-N 379 (503)
T ss_pred ----CCcEEEEeccchHH----HHHHHhhhhheeeeEEccCCceEeeecc----CccEEEEEcCCC--------ccch-h
Confidence 22788899887641 1111122334567888999998764332 245666666541 1111 1
Q ss_pred eccccceEE--E-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--CCceeEEEEEeeCCEEEEEEEeCC
Q psy4818 300 IPGMDHHHE--I-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED--ENRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 300 ~~~~~~~~~--~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
+........ . ..|++++++-.+.. ..++.+.+...-+.+-+..+.+. .+..++--+.++ +..+++.+.+
T Consensus 380 i~~~~~hsmP~~~~~P~~~~~~aQs~d----N~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD-G~~l~SGdsd- 453 (503)
T KOG0282|consen 380 IADPEMHTMPCLTLHPNGKWFAAQSMD----NYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD-GRTLCSGDSD- 453 (503)
T ss_pred hcchhhccCcceecCCCCCeehhhccC----ceEEEEecccccccCHhhhhcceeccCceeeEEEcCC-CCeEEeecCC-
Confidence 111111111 1 56777766543332 23555544322111112222211 122222223344 6666666444
Q ss_pred ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEE
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ 415 (734)
..++.||.++-+....+..+.+.+.++.+.|-....++++
T Consensus 454 -G~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~ 493 (503)
T KOG0282|consen 454 -GKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATC 493 (503)
T ss_pred -ccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEec
Confidence 5899999888777777777766666777777665444443
No 246
>KOG1273|consensus
Probab=97.99 E-value=0.0016 Score=63.48 Aligned_cols=158 Identities=15% Similarity=0.110 Sum_probs=88.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc---ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~---~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.....||+.|.+||..... ..+.+||..|-.+ +...... +.+++||+||+.|+-.+.|.
T Consensus 26 a~~~~Fs~~G~~lAvGc~n-----G~vvI~D~~T~~iar~lsaH~~p--i~sl~WS~dgr~LltsS~D~----------- 87 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCAN-----GRVVIYDFDTFRIARMLSAHVRP--ITSLCWSRDGRKLLTSSRDW----------- 87 (405)
T ss_pred cceEEeccCcceeeeeccC-----CcEEEEEccccchhhhhhccccc--eeEEEecCCCCEeeeecCCc-----------
Confidence 4568999999999987753 2588899887543 2222333 36899999999887766433
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+..|++-.+..-....|.. -+.+..|.|-.+..++..--. ..-++.++.......|..+.+ ..+
T Consensus 88 -----si~lwDl~~gs~l~rirf~s-----pv~~~q~hp~k~n~~va~~~~---~sp~vi~~s~~~h~~Lp~d~d-~dl- 152 (405)
T KOG1273|consen 88 -----SIKLWDLLKGSPLKRIRFDS-----PVWGAQWHPRKRNKCVATIME---ESPVVIDFSDPKHSVLPKDDD-GDL- 152 (405)
T ss_pred -----eeEEEeccCCCceeEEEccC-----ccceeeeccccCCeEEEEEec---CCcEEEEecCCceeeccCCCc-ccc-
Confidence 67788877665333333332 234577877554443332211 123455555421111110000 000
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
........+.+.|++||.-+. .++|..++..+.+
T Consensus 153 -n~sas~~~fdr~g~yIitGts----KGkllv~~a~t~e 186 (405)
T KOG1273|consen 153 -NSSASHGVFDRRGKYIITGTS----KGKLLVYDAETLE 186 (405)
T ss_pred -ccccccccccCCCCEEEEecC----cceEEEEecchhe
Confidence 000111137788887774332 4578888887754
No 247
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.98 E-value=4.5e-05 Score=86.22 Aligned_cols=98 Identities=14% Similarity=0.076 Sum_probs=63.2
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc--c----------c---------ccc
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA--G----------R---------LLK 544 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~--~----------~---------~~~ 544 (734)
...|+||++||..+... .|. .++..|+++||.|+++|+||+|... |... + + ++.
T Consensus 447 ~g~P~VVllHG~~g~~~--~~~-~lA~~La~~Gy~VIaiDlpGHG~S~--~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKE--NAL-AFAGTLAAAGVATIAIDHPLHGARS--FDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCCcEEEEeCCCCCCHH--HHH-HHHHHHHhCCcEEEEeCCCCCCccc--cccccccccccccCccceeccccccccccC
Confidence 34689999999765543 233 2446677679999999999976542 2200 0 0 011
Q ss_pred CCCchhHHHHHHHHHH------Hc----CCCCCCcEEEEEcChHHHHHHHHHhc
Q psy4818 545 KQNCFDDFQAAAEYMI------NK----KYTKPKYITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~------~~----~~~d~~ri~i~G~S~GG~~~~~~~~~ 588 (734)
-...+.|+......|. .+ +..+..++.++|||+||.+...++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1223456666655554 11 12456799999999999999999875
No 248
>KOG0643|consensus
Probab=97.97 E-value=0.00075 Score=64.20 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=84.9
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+++.++-.+.++-|.++|. .|+..+.+.+||+++|+.+-....+.......|+++|..++++....
T Consensus 50 GHtGavW~~Did~~s~~li-----TGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~--------- 115 (327)
T KOG0643|consen 50 GHTGAVWCCDIDWDSKHLI-----TGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQ--------- 115 (327)
T ss_pred CCCceEEEEEecCCcceee-----eccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhh---------
Confidence 3456677888888888887 46666899999999999765444444446789999999999988643
Q ss_pred ccccCCcEEEEEECCCCC----CCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 219 TTAHMGQKIYYHVLGTEQ----DKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~----~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
......|.+.++.... .++ .+....++ .-...+-|+|-|++|+.- .....|-.||+.+|
T Consensus 116 --mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~--skit~a~Wg~l~~~ii~G----he~G~is~~da~~g 179 (327)
T KOG0643|consen 116 --MGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD--SKITSALWGPLGETIIAG----HEDGSISIYDARTG 179 (327)
T ss_pred --cCcceEEEEEEccCChhhhcccCceEEecCCc--cceeeeeecccCCEEEEe----cCCCcEEEEEcccC
Confidence 3445566666665322 111 22222222 234568899999999842 22357889999884
No 249
>KOG0306|consensus
Probab=97.96 E-value=0.0012 Score=71.42 Aligned_cols=236 Identities=13% Similarity=0.106 Sum_probs=132.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+-...|-|-+++|..... ...|-++|+.++..+.... ......+++-+||+++++-.+.|.
T Consensus 415 ~l~~~Fvpgd~~Iv~G~k-----~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDk------------- 476 (888)
T KOG0306|consen 415 ILASKFVPGDRYIVLGTK-----NGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADK------------- 476 (888)
T ss_pred EEEEEecCCCceEEEecc-----CCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCc-------------
Confidence 335678888888876543 2468999999887544322 122236778899999998877543
Q ss_pred CCcEEEEEEC------CCCCCC-----CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 223 MGQKIYYHVL------GTEQDK-----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 223 ~~~~l~~~~l------~t~~~~-----~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
.|..|+. ++.+.+ ...+.+.++ -+..+++||||++|++..-+ +.+.++-+++. .
T Consensus 477 ---tVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d---dvL~v~~Spdgk~LaVsLLd----nTVkVyflDtl-K---- 541 (888)
T KOG0306|consen 477 ---TVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED---DVLCVSVSPDGKLLAVSLLD----NTVKVYFLDTL-K---- 541 (888)
T ss_pred ---EEEEEeEEEEeccCcccceeeeeccceEEeccc---cEEEEEEcCCCcEEEEEecc----CeEEEEEecce-e----
Confidence 2333321 111111 001223322 35678999999999987654 33444444441 0
Q ss_pred CCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEE
Q psy4818 292 GKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 370 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 370 (734)
=...|-.+.-+.... +|||++.++ .+..+ .+-+++-.|. +.. -+.++.++ +.+. .+.+-+..+++|+.
T Consensus 542 ---FflsLYGHkLPV~smDIS~DSkliv-TgSAD-KnVKiWGLdF--GDC--HKS~fAHd-DSvm-~V~F~P~~~~FFt~ 610 (888)
T KOG0306|consen 542 ---FFLSLYGHKLPVLSMDISPDSKLIV-TGSAD-KNVKIWGLDF--GDC--HKSFFAHD-DSVM-SVQFLPKTHLFFTC 610 (888)
T ss_pred ---eeeeecccccceeEEeccCCcCeEE-eccCC-CceEEecccc--chh--hhhhhccc-Ccee-EEEEcccceeEEEe
Confidence 011222222233333 889987554 33322 2444555444 431 14566665 3333 33333448899998
Q ss_pred EeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 371 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 371 ~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+ ..+..||-..=+.++.+......+..++.+|+|+.+ ++.+... .+..|..
T Consensus 611 gKD--~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~v-vs~shD~---sIRlwE~ 663 (888)
T KOG0306|consen 611 GKD--GKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFV-VSSSHDK---SIRLWER 663 (888)
T ss_pred cCc--ceEEeechhhhhhheeeccchheeeeeEEcCCCCeE-EeccCCc---eeEeeec
Confidence 877 478899754344556776666667788888888644 4443322 4555554
No 250
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.95 E-value=5.4e-05 Score=75.45 Aligned_cols=138 Identities=20% Similarity=0.229 Sum_probs=90.0
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-----cccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-----TFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-----~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
..+++.+.. |+..|..+.+.-++. .+.--||+.-|- +..+.. .....+..+....|..|+..||||-|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a---~~~RWiL~s~GN-g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~- 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA---KPQRWILVSNGN-GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS- 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC---CCCcEEEEEcCC-hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc-
Confidence 577888875 999999888764332 344466666553 222222 223345566677799999999999331
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC-CCCCCcEEEEEcChHHHHHHHHHhcCC----Ccee-EEEEcCCcchhc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQRP----ELYG-AALILVGALDML 606 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~ri~i~G~S~GG~~~~~~~~~~p----~~~~-a~v~~~~~~d~~ 606 (734)
..|.. ....-+.|..++++||.++. -+.+++|.+.|+|.||.+++.++.++. |-.+ .+|...++.++.
T Consensus 185 -----S~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~ 258 (365)
T PF05677_consen 185 -----STGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLA 258 (365)
T ss_pred -----CCCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHH
Confidence 12222 12345778899999998764 368999999999999999988776542 1122 244456666554
Q ss_pred c
Q psy4818 607 R 607 (734)
Q Consensus 607 ~ 607 (734)
.
T Consensus 259 ~ 259 (365)
T PF05677_consen 259 A 259 (365)
T ss_pred H
Confidence 3
No 251
>KOG1516|consensus
Probab=97.95 E-value=1.5e-05 Score=89.99 Aligned_cols=128 Identities=21% Similarity=0.214 Sum_probs=85.7
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHH-HHHHHHhcCeEEEEEecccCCCCCchhhhcccccc-CCC
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK-KQN 547 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~-~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~-~~~ 547 (734)
-+..-++.|+.....+ .|++||+|||...... ..|... ....+..+..+|+.++||-|- +| |...+.... +-.
T Consensus 96 CLylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN~ 171 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGNL 171 (545)
T ss_pred CceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCcc
Confidence 4677888887643223 9999999998432221 112111 123445558999999999753 33 333322222 334
Q ss_pred chhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCc
Q psy4818 548 CFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGA 602 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 602 (734)
.+.|.+.|++|+.++ ---||++|.|+|+|+||.++..++.- ...+|+.+|+.+|.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 567999999999775 22699999999999999999888652 22488888887774
No 252
>KOG0285|consensus
Probab=97.93 E-value=0.0011 Score=65.45 Aligned_cols=235 Identities=14% Similarity=0.115 Sum_probs=138.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.-+..+.+-|-..+++ .|+...+|.+||+++|+... .+..-....++++|+-.-++|-...+
T Consensus 152 gWVr~vavdP~n~wf~-----tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ged------------ 214 (460)
T KOG0285|consen 152 GWVRSVAVDPGNEWFA-----TGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGED------------ 214 (460)
T ss_pred ceEEEEeeCCCceeEE-----ecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCC------------
Confidence 3467788889888887 34455799999999998532 22111123578899877766655433
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+|..|++...+. |..--.+-.-+..+...|--..|+ +. +..+.+.+||+.+. ..+..+.
T Consensus 215 ----k~VKCwDLe~nkv----IR~YhGHlS~V~~L~lhPTldvl~-t~---grDst~RvWDiRtr--------~~V~~l~ 274 (460)
T KOG0285|consen 215 ----KQVKCWDLEYNKV----IRHYHGHLSGVYCLDLHPTLDVLV-TG---GRDSTIRVWDIRTR--------ASVHVLS 274 (460)
T ss_pred ----CeeEEEechhhhh----HHHhccccceeEEEeccccceeEE-ec---CCcceEEEeeeccc--------ceEEEec
Confidence 2789999876531 211111222345567777666665 22 23378899999882 3344454
Q ss_pred ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
.+......+ +.|-.-.++-.+. +..|.+||+..+. ....++.+. ..+...........++++.. ..+.
T Consensus 275 GH~~~V~~V~~~~~dpqvit~S~----D~tvrlWDl~agk--t~~tlt~hk--ksvral~lhP~e~~fASas~---dnik 343 (460)
T KOG0285|consen 275 GHTNPVASVMCQPTDPQVITGSH----DSTVRLWDLRAGK--TMITLTHHK--KSVRALCLHPKENLFASASP---DNIK 343 (460)
T ss_pred CCCCcceeEEeecCCCceEEecC----CceEEEeeeccCc--eeEeeeccc--ceeeEEecCCchhhhhccCC---ccce
Confidence 444443333 3333333553322 3468899997665 244555554 33344433332445554433 4688
Q ss_pred EEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|++..|+.++.+....+.+..++.+.|+ ++++.+. -..++.+|.
T Consensus 344 ~w~~p~g~f~~nlsgh~~iintl~~nsD~--v~~~G~d---ng~~~fwdw 388 (460)
T KOG0285|consen 344 QWKLPEGEFLQNLSGHNAIINTLSVNSDG--VLVSGGD---NGSIMFWDW 388 (460)
T ss_pred eccCCccchhhccccccceeeeeeeccCc--eEEEcCC---ceEEEEEec
Confidence 89998888777776665556666666554 5554433 356888888
No 253
>KOG1274|consensus
Probab=97.91 E-value=0.00041 Score=76.67 Aligned_cols=178 Identities=12% Similarity=0.055 Sum_probs=110.1
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISW 195 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~w 195 (734)
+.+.+-..+++..+++.=+ ..+...++|-+|+++|+.+ +...|.++++.++.... .......+..+.+
T Consensus 78 v~~y~fps~~~~~iL~Rft------lp~r~~~v~g~g~~iaags-----dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~ 146 (933)
T KOG1274|consen 78 VLRYKFPSGEEDTILARFT------LPIRDLAVSGSGKMIAAGS-----DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSY 146 (933)
T ss_pred EEEeeCCCCCccceeeeee------ccceEEEEecCCcEEEeec-----CceeEEEEeccccchheeecccCCceeeeeE
Confidence 4444444566665665432 4478899999999999754 45789999887765322 1222223468999
Q ss_pred EcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCee--EEe--cCCCCeeEEEEEEecCCcEEEEEEecC
Q psy4818 196 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP--VVE--FPNGRSLGLHSEVTDCGRYLLVSTSNN 271 (734)
Q Consensus 196 SpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~--v~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~ 271 (734)
.|.+..|+.+..+. .|++|++.++.....+ +.. +.........++|+|+|..+++...+
T Consensus 147 ~p~~~fLAvss~dG----------------~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d- 209 (933)
T KOG1274|consen 147 DPKGNFLAVSSCDG----------------KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD- 209 (933)
T ss_pred cCCCCEEEEEecCc----------------eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC-
Confidence 99999999888755 6888888765422111 000 01112345678999997766664433
Q ss_pred CCCceEEEEeCCCCCCCcccCCCCceeeeccc-cceEE--EEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 272 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-DHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 272 ~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
+.|-+++..+... .-.+.... ...+. .|+|.|++|+-.+- +++|.+||+++
T Consensus 210 ---~~Vkvy~r~~we~--------~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~----~g~I~vWnv~t 263 (933)
T KOG1274|consen 210 ---NTVKVYSRKGWEL--------QFKLRDKLSSSKFSDLQWSPNGKYIAASTL----DGQILVWNVDT 263 (933)
T ss_pred ---CeEEEEccCCcee--------heeecccccccceEEEEEcCCCcEEeeecc----CCcEEEEeccc
Confidence 5788888776211 11122111 12233 39999998885433 45699999885
No 254
>KOG0650|consensus
Probab=97.90 E-value=0.00072 Score=71.22 Aligned_cols=234 Identities=13% Similarity=0.114 Sum_probs=121.7
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
++..+.+++..|.|.+|| +|++..+++||.+.||.++........+..++|+|.++.=+.....+
T Consensus 399 Htg~Vr~iSvdp~G~wla-----sGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~---------- 463 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLA-----SGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVG---------- 463 (733)
T ss_pred cCCeEEEEEecCCcceee-----ecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEec----------
Confidence 345578899999999999 56677789999999999876443333447899999987433333211
Q ss_pred cccCCcEEEEEECCCCC--C---CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQ--D---KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~--~---~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
. .+.+.+-.-+. . .+.+++..+.. -.||+ .+ ..|.-.. ...+ ..
T Consensus 464 ----~-~~~ivnp~~G~~~e~~~t~ell~~~~~~--------~~p~~-~~-------------~~W~~~~--~~e~--~~ 512 (733)
T KOG0650|consen 464 ----E-CVLIVNPIFGDRLEVGPTKELLASAPNE--------SEPDA-AV-------------VTWSRAS--LDEL--EK 512 (733)
T ss_pred ----C-ceEEeCccccchhhhcchhhhhhcCCCc--------cCCcc-cc-------------eeechhh--hhhh--cc
Confidence 1 24444322110 0 01111111110 11222 11 1111110 0000 00
Q ss_pred CceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 295 PLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 295 ~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
.+...+......... |..+|++|..+...++ +..+++..+..... +.-+.-. ...++.+.+..-...+|.+++.
T Consensus 513 ~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~-~~~VliHQLSK~~s---Q~PF~ks-kG~vq~v~FHPs~p~lfVaTq~ 587 (733)
T KOG0650|consen 513 GVCIVIKHPKSIRQVTWHRKGDYLATVMPDSG-NKSVLIHQLSKRKS---QSPFRKS-KGLVQRVKFHPSKPYLFVATQR 587 (733)
T ss_pred ceEEEEecCCccceeeeecCCceEEEeccCCC-cceEEEEecccccc---cCchhhc-CCceeEEEecCCCceEEEEecc
Confidence 111122222222233 8888998887776544 45688888875431 1112112 2334444443323334444332
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|.+||+...+..+.+-...-.++.++.++.|+.+++. +...--.+|.+|+
T Consensus 588 ---~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~g--s~d~k~~WfDldl 638 (733)
T KOG0650|consen 588 ---SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILG--SYDKKMCWFDLDL 638 (733)
T ss_pred ---ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEe--cCCCeeEEEEccc
Confidence 48899996555444443335567888999988888764 4443334555555
No 255
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.90 E-value=0.037 Score=56.20 Aligned_cols=252 Identities=17% Similarity=0.178 Sum_probs=124.5
Q ss_pred eeEEeCCCCcEEEEEEe-----CCCCceEEEEEEECCCCCcccc-cccc-------cccCeeEEEcCCcEEEEEEEecCC
Q psy4818 145 KLYAFSDNGKHFAYCLS-----KSGSDWNTLHIKDVDTGKDYPE-VLKN-------VKFPSISWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~-----~~g~~~~~l~v~dl~~g~~~~~-~~~~-------~~~~~~~wSpDg~~l~y~~~~~~~ 211 (734)
..+.+||||+.++.... ..|...-.|-+||.+|=.+..+ .+.. .....++.|.|||++++.....
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TP-- 116 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTP-- 116 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESS--
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCC--
Confidence 46889999999886542 2343334578999987543211 1110 1125678999999998877633
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
...|-++++.... .+- +-+-++-.. +.-++..++..+ +....+..+.++...+..
T Consensus 117 ------------a~SVtVVDl~~~k----vv~-ei~~PGC~~-iyP~~~~~F~~l-----C~DGsl~~v~Ld~~Gk~~-- 171 (342)
T PF06433_consen 117 ------------ATSVTVVDLAAKK----VVG-EIDTPGCWL-IYPSGNRGFSML-----CGDGSLLTVTLDADGKEA-- 171 (342)
T ss_dssp ------------SEEEEEEETTTTE----EEE-EEEGTSEEE-EEEEETTEEEEE-----ETTSCEEEEEETSTSSEE--
T ss_pred ------------CCeEEEEECCCCc----eee-eecCCCEEE-EEecCCCceEEE-----ecCCceEEEEECCCCCEe--
Confidence 2368888887542 121 111222221 111222222221 111122333333200000
Q ss_pred CCCCceeeecc-ccce--EEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCC---CceEeecCC--CCcee---EEEEE
Q psy4818 292 GKFPLKTVIPG-MDHH--HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK---NWKTLIPED--ENRTL---DVVAA 360 (734)
Q Consensus 292 ~~~~~~~l~~~-~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~---~~~~l~~~~--~~~~~---~~~~~ 360 (734)
......+.. .+.. ...++.++.+++|.|-. ++||.+|+.+.... .|..+.... +.... +.+.+
T Consensus 172 --~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~----G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~ 245 (342)
T PF06433_consen 172 --QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE----GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAY 245 (342)
T ss_dssp --EEEEEESSTTTS-B-S--EEETTTTEEEEEBTT----SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEE
T ss_pred --EeeccccCCCCcccccccceECCCCeEEEEecC----CEEEEEeccCCcccccCcccccCccccccCcCCcceeeeee
Confidence 000111111 1111 12356677889997754 57999998765410 122111110 01111 11222
Q ss_pred -eeCCEEEEEEEeC-------CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCC
Q psy4818 361 -VANNKLIVHYIQN-------VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPEN 432 (734)
Q Consensus 361 -~~~~~l~~~~~~~-------~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~ 432 (734)
...+++|+.-..+ +..+|+++|+++++.++++.+. ..+.++.++.+.+=+++..+.- -..++++|.
T Consensus 246 ~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~--~~~l~v~D~--- 319 (342)
T PF06433_consen 246 HAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAG--DGTLDVYDA--- 319 (342)
T ss_dssp ETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETT--TTEEEEEET---
T ss_pred ccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCC--CCeEEEEeC---
Confidence 2336777654432 2358999999999998888765 2333566666666566665542 257999999
Q ss_pred cCCCC
Q psy4818 433 ITDQD 437 (734)
Q Consensus 433 ~~~~~ 437 (734)
.+|
T Consensus 320 --~tG 322 (342)
T PF06433_consen 320 --ATG 322 (342)
T ss_dssp --TT-
T ss_pred --cCC
Confidence 677
No 256
>KOG2551|consensus
Probab=97.90 E-value=0.00079 Score=62.96 Aligned_cols=184 Identities=17% Similarity=0.208 Sum_probs=106.8
Q ss_pred CCcEEEEecCCCCCcCCccccH---HHHHHHHhcCeEEEEEeccc-------CCCCC--------------chhhhccc-
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSI---SRCMFLRHFNGIYAIPNIRG-------GGELG--------------EDWHNAGR- 541 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~---~~~~~l~~~G~~v~~~~~rG-------~~~~g--------------~~~~~~~~- 541 (734)
+.+-||++||-- +....|+. .+...|.+. +-.+.++-+- .-.-+ ..|.....
T Consensus 4 ~k~rvLcLHGfr--Qsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFR--QSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CCceEEEecchh--hccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc
Confidence 467899999953 33334432 244555543 4455554431 00000 22444322
Q ss_pred cccCCCchhH-HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc---------CCCceeEEEEcCCcchhcccccc
Q psy4818 542 LLKKQNCFDD-FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ---------RPELYGAALILVGALDMLRFNKF 611 (734)
Q Consensus 542 ~~~~~~~~~D-~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~---------~p~~~~a~v~~~~~~d~~~~~~~ 611 (734)
.......++. +....+|+.++|--| ||.|+|.|+.|++.+++. .| -|+-+|...|+.-.-
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~----- 150 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPS----- 150 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCc-----
Confidence 1122233444 445566778888777 899999999999999872 12 256666666654210
Q ss_pred ccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcE
Q psy4818 612 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 691 (734)
Q Consensus 612 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~ 691 (734)
.+.+.. . ...+ +++| .|-+.|+.|..||...+..+++...+.
T Consensus 151 -----------~~~~~~---~---------~~~~---i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a----------- 192 (230)
T KOG2551|consen 151 -----------KKLDES---A---------YKRP---LSTP-SLHIFGETDTIVPSERSEQLAESFKDA----------- 192 (230)
T ss_pred -----------chhhhh---h---------hccC---CCCC-eeEEecccceeecchHHHHHHHhcCCC-----------
Confidence 000000 0 1122 7788 999999999999999999999876543
Q ss_pred EEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 692 LLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
. ++.-.+||.+..... ....+.+||...+.
T Consensus 193 ~-vl~HpggH~VP~~~~----~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 193 T-VLEHPGGHIVPNKAK----YKEKIADFIQSFLQ 222 (230)
T ss_pred e-EEecCCCccCCCchH----HHHHHHHHHHHHHH
Confidence 3 334457999876542 23345666665543
No 257
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.89 E-value=0.011 Score=59.11 Aligned_cols=257 Identities=11% Similarity=0.019 Sum_probs=130.4
Q ss_pred CeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc
Q psy4818 101 NNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 180 (734)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~ 180 (734)
.-++|-|+.+ . -+++.+..++.....+.+. .+..-.+.-.|||||++|.-+..+-.+.+..|-|||++.+-.
T Consensus 18 ~avafaRRPG-~---~~~v~D~~~g~~~~~~~a~----~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ 89 (305)
T PF07433_consen 18 EAVAFARRPG-T---FALVFDCRTGQLLQRLWAP----PGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYR 89 (305)
T ss_pred eEEEEEeCCC-c---EEEEEEcCCCceeeEEcCC----CCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcE
Confidence 3455555554 2 2445555556555555432 334446778999999998877766555667899999984432
Q ss_pred -ccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc---ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEE
Q psy4818 181 -YPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE---TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS 255 (734)
Q Consensus 181 -~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 255 (734)
+.+ ...++....+.|.|||++|+...---....+.|.. -+...+ .|-+.+..++..-+........+...+..+
T Consensus 90 ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~p-sL~~ld~~sG~ll~q~~Lp~~~~~lSiRHL 168 (305)
T PF07433_consen 90 RIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQP-SLVYLDARSGALLEQVELPPDLHQLSIRHL 168 (305)
T ss_pred EEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCC-ceEEEecCCCceeeeeecCccccccceeeE
Confidence 221 23334445789999999988753211001111111 112223 345555555432111111111122235678
Q ss_pred EEecCCcEEEEEEecCCCC---ceEEEEeCCCCCCCcccCCCCceeeeccc-cceEEE-EEecCCeEEEEeCCCCCCceE
Q psy4818 256 EVTDCGRYLLVSTSNNTQG---SDLHYFDLHSLPDGKISGKFPLKTVIPGM-DHHHEI-IANNGPELIVKTTKNAPKGKV 330 (734)
Q Consensus 256 ~~SpDG~~l~~~~~~~~~~---~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-~~~~~~-~s~dg~~l~~~s~~~~~~~~l 330 (734)
++++||.-++-....+... .-|.+.+... .-..+. .+.. ..... ...-++ ++.+|+.+++.+-+. ..+
T Consensus 169 a~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~-~~~~~~--~p~~-~~~~l~~Y~gSIa~~~~g~~ia~tsPrG---g~~ 241 (305)
T PF07433_consen 169 AVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG-ALRLLP--APEE-QWRRLNGYIGSIAADRDGRLIAVTSPRG---GRV 241 (305)
T ss_pred EecCCCcEEEEEecCCCCCccCCeEEEEcCCC-cceecc--CChH-HHHhhCCceEEEEEeCCCCEEEEECCCC---CEE
Confidence 9999998766554443321 3455554443 111110 0000 00011 122233 788888888877764 358
Q ss_pred EEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 331 VTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 331 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
.++|.+++. +....+-. -..++...+ +.++++ +|...+...+.
T Consensus 242 ~~~d~~tg~---~~~~~~l~---D~cGva~~~-~~f~~s---sG~G~~~~~~~ 284 (305)
T PF07433_consen 242 AVWDAATGR---LLGSVPLP---DACGVAPTD-DGFLVS---SGQGQLIRLSP 284 (305)
T ss_pred EEEECCCCC---EeeccccC---ceeeeeecC-CceEEe---CCCccEEEccC
Confidence 888988776 33333222 234454444 333333 23345555543
No 258
>KOG0316|consensus
Probab=97.89 E-value=0.0052 Score=57.55 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=137.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..+.+.-||+|..-. |++ .+|++|++..|..+..-.+.. .+-..+-|-|+..|+-...
T Consensus 18 gaV~avryN~dGnY~ltc----Gsd-rtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg------------- 79 (307)
T KOG0316|consen 18 GAVRAVRYNVDGNYCLTC----GSD-RTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG------------- 79 (307)
T ss_pred cceEEEEEccCCCEEEEc----CCC-ceEEeecccccceeeeecCCCceeeeccccccccccccCCC-------------
Confidence 457789999999987643 333 589999998887655332221 2234555667766665443
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
...+++|++.|++... -|. .+..-+..+.|..+...++ ++...+.+.+||-.+.. ..+.+++
T Consensus 80 ---Dk~v~vwDV~TGkv~R--r~r--gH~aqVNtV~fNeesSVv~----SgsfD~s~r~wDCRS~s-------~ePiQil 141 (307)
T KOG0316|consen 80 ---DKAVQVWDVNTGKVDR--RFR--GHLAQVNTVRFNEESSVVA----SGSFDSSVRLWDCRSRS-------FEPIQIL 141 (307)
T ss_pred ---CceEEEEEcccCeeee--ecc--cccceeeEEEecCcceEEE----eccccceeEEEEcccCC-------CCccchh
Confidence 3379999999986422 122 2333455678887776655 33344788888876611 2233445
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
.....+...+.-.+..|+ .... ++.+-.+|+..+. +...--...+..+.+.+++.+.+...-+ +.|.+
T Consensus 142 dea~D~V~Si~v~~heIv-aGS~---DGtvRtydiR~G~------l~sDy~g~pit~vs~s~d~nc~La~~l~--stlrL 209 (307)
T KOG0316|consen 142 DEAKDGVSSIDVAEHEIV-AGSV---DGTVRTYDIRKGT------LSSDYFGHPITSVSFSKDGNCSLASSLD--STLRL 209 (307)
T ss_pred hhhcCceeEEEecccEEE-eecc---CCcEEEEEeecce------eehhhcCCcceeEEecCCCCEEEEeecc--ceeee
Confidence 555555544444444444 3322 3457777876553 2222224556666666656666666555 57899
Q ss_pred EECCCCceeeeeCCCCceEEeeccCc-ccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRR-KYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~-d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|-.+|+.++........-.-+.... .....+++.|. -+.+|.||+
T Consensus 210 lDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSE---DG~Vy~wdL 256 (307)
T KOG0316|consen 210 LDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSE---DGKVYFWDL 256 (307)
T ss_pred cccchhHHHHHhcccccceeeeeeeecccceeEEeccC---CceEEEEEe
Confidence 99999998766554421111222211 23345555443 357999999
No 259
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.89 E-value=4.4e-05 Score=74.22 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=77.4
Q ss_pred CCcEEEEecCCCCCcCCccccH---HHHHHHHhcCeEEEEEecccC--------------------CCCCchhhhccccc
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSI---SRCMFLRHFNGIYAIPNIRGG--------------------GELGEDWHNAGRLL 543 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~---~~~~~l~~~G~~v~~~~~rG~--------------------~~~g~~~~~~~~~~ 543 (734)
+++-||++||...+.. -|.. .+...|.+.++-++.+|-+-- .+....|......
T Consensus 3 ~k~riLcLHG~~~na~--if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE--IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--HH--HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCHH--HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC-
Confidence 4678999999754432 2222 233445433777777764321 1112233332211
Q ss_pred cCCCchhHHHHHHHHHHH----cCCCCCCcEEEEEcChHHHHHHHHHhcC--------CCceeEEEEcCCcchhcccccc
Q psy4818 544 KKQNCFDDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLRFNKF 611 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~ 611 (734)
.....++..++++|.+ +|- -.||+|+|.||.+++.++.+. ...||.+|+.+|+.-....
T Consensus 80 --~~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--- 150 (212)
T PF03959_consen 80 --DHEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--- 150 (212)
T ss_dssp --SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----
T ss_pred --cccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---
Confidence 2234455555555543 332 359999999999999887531 1247888888876531110
Q ss_pred ccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcE
Q psy4818 612 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 691 (734)
Q Consensus 612 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~ 691 (734)
+..+. ... .++.| +|-++|.+|..+++..++++++..... .
T Consensus 151 ------------------------~~~~~-~~~---~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~----------~ 191 (212)
T PF03959_consen 151 ------------------------YQELY-DEP---KISIP-TLHVIGENDPVVPPERSEALAEMFDPD----------A 191 (212)
T ss_dssp ------------------------GTTTT---T---T---E-EEEEEETT-SSS-HHHHHHHHHHHHHH----------E
T ss_pred ------------------------hhhhh-ccc---cCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC----------c
Confidence 00111 111 16677 999999999999999999888887652 2
Q ss_pred EEEEeCCCCCCCCCc
Q psy4818 692 LLRVEQDAGHGQGTP 706 (734)
Q Consensus 692 ~~~~~~~~gH~~~~~ 706 (734)
.++. -+.||.+...
T Consensus 192 ~v~~-h~gGH~vP~~ 205 (212)
T PF03959_consen 192 RVIE-HDGGHHVPRK 205 (212)
T ss_dssp EEEE-ESSSSS----
T ss_pred EEEE-ECCCCcCcCC
Confidence 4444 4579988654
No 260
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.89 E-value=0.0022 Score=65.48 Aligned_cols=237 Identities=14% Similarity=0.066 Sum_probs=121.0
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
.++.|-|+++.|.|+- ..| ..|+.+|.++|+......... ++....--++..|+ +...
T Consensus 28 EgP~w~~~~~~L~w~D-I~~---~~i~r~~~~~g~~~~~~~p~~-~~~~~~~d~~g~Lv-~~~~---------------- 85 (307)
T COG3386 28 EGPVWDPDRGALLWVD-ILG---GRIHRLDPETGKKRVFPSPGG-FSSGALIDAGGRLI-ACEH---------------- 85 (307)
T ss_pred cCccCcCCCCEEEEEe-CCC---CeEEEecCCcCceEEEECCCC-cccceeecCCCeEE-EEcc----------------
Confidence 4689999999887754 343 369999998886433222221 13333323333333 3321
Q ss_pred cEEEEEECCCCCCCCeeEEecCCC-C-eeEEEEEEecCCcEEEEEEec-----CCC---CceEEEEeCCCCCCCcccCCC
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNG-R-SLGLHSEVTDCGRYLLVSTSN-----NTQ---GSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~-~-~~~~~~~~SpDG~~l~~~~~~-----~~~---~~~i~~~d~~~~~~~~l~~~~ 294 (734)
.+++.+..++... .++.+..++ . ...-.....|||++-+ .... ... ...||+++..++
T Consensus 86 -g~~~~~~~~~~~~-t~~~~~~~~~~~~r~ND~~v~pdG~~wf-gt~~~~~~~~~~~~~~G~lyr~~p~g~--------- 153 (307)
T COG3386 86 -GVRLLDPDTGGKI-TLLAEPEDGLPLNRPNDGVVDPDGRIWF-GDMGYFDLGKSEERPTGSLYRVDPDGG--------- 153 (307)
T ss_pred -ccEEEeccCCcee-EEeccccCCCCcCCCCceeEcCCCCEEE-eCCCccccCccccCCcceEEEEcCCCC---------
Confidence 2344443322110 122211111 0 1222467788887543 3322 111 147899986541
Q ss_pred Cceeeecc-ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCC--CCC-CCceEeecCCCCceeEEEEEeeCCEEEEE
Q psy4818 295 PLKTVIPG-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN--PCE-KNWKTLIPEDENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 295 ~~~~l~~~-~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~--~~~-~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 369 (734)
..+++.+ ...... .|||||+.+|+.-. ...+|++++++. +.. ..-..+....+.....++....++.+++.
T Consensus 154 -~~~l~~~~~~~~NGla~SpDg~tly~aDT---~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~ 229 (307)
T COG3386 154 -VVRLLDDDLTIPNGLAFSPDGKTLYVADT---PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVA 229 (307)
T ss_pred -EEEeecCcEEecCceEECCCCCEEEEEeC---CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEe
Confidence 2233322 221112 39999998887533 345799998862 111 11111222112233344545544556554
Q ss_pred EEeCCceeEEEEECCCCceeeeeCCCCceEEeecc-CcccceEEEEEecCCCC
Q psy4818 370 YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFTSFLQP 421 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~-~~d~~~l~~~~ss~~~P 421 (734)
...++ ..|.+++. +|+.+..+..|...++..++ .++.+.|+++.+....+
T Consensus 230 a~~~g-~~v~~~~p-dG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 230 AVWGG-GRVVRFNP-DGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred cccCC-ceEEEECC-CCcEEEEEECCCCCCccceEeCCCcCEEEEEecCCCCC
Confidence 43333 58999999 59988888877433333322 35567888776665443
No 261
>KOG0273|consensus
Probab=97.86 E-value=0.0052 Score=63.16 Aligned_cols=234 Identities=13% Similarity=0.116 Sum_probs=128.6
Q ss_pred EEeeEEeCCCCc-EEEEEEeCCCCceEEEEEEECCC----CCc---c--------cccccccccCeeEEEcCCcEEEEEE
Q psy4818 143 ALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDVDT----GKD---Y--------PEVLKNVKFPSISWTHDHKGFFYNQ 206 (734)
Q Consensus 143 ~~~~~~~SPDG~-~la~~~~~~g~~~~~l~v~dl~~----g~~---~--------~~~~~~~~~~~~~wSpDg~~l~y~~ 206 (734)
.+-..+|+|--. .+|+.. +...-+++++.. +.. + .....+-....++|+.||..|++..
T Consensus 180 ~V~~~~WnP~~~~llasg~-----~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~ 254 (524)
T KOG0273|consen 180 EVFICAWNPLRDGLLASGS-----GDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGS 254 (524)
T ss_pred ceEEEecCchhhhhhhccC-----CccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEee
Confidence 356678888766 566433 223445555432 111 0 1122223457899999999999988
Q ss_pred EecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCC
Q psy4818 207 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 286 (734)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~ 286 (734)
.+. .+.+|+..+... ..+. .+.+-+.++.|+.+|.||+- ..-...+.+||..+|.
T Consensus 255 ~~G----------------~~riw~~~G~l~---~tl~--~HkgPI~slKWnk~G~yilS----~~vD~ttilwd~~~g~ 309 (524)
T KOG0273|consen 255 EDG----------------EARIWNKDGNLI---STLG--QHKGPIFSLKWNKKGTYILS----GGVDGTTILWDAHTGT 309 (524)
T ss_pred cCc----------------EEEEEecCchhh---hhhh--ccCCceEEEEEcCCCCEEEe----ccCCccEEEEeccCce
Confidence 754 577777765432 2222 22334568999999999983 2233678889987732
Q ss_pred CCcccCCCCceeeec-cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC
Q psy4818 287 DGKISGKFPLKTVIP-GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 364 (734)
Q Consensus 287 ~~~l~~~~~~~~l~~-~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 364 (734)
+...+. .......+ |-.+ +.++..+. + ....||.++.+.+. ..++.+. ..+..+.+.+-+
T Consensus 310 ---------~~q~f~~~s~~~lDVdW~~~-~~F~ts~t-d-~~i~V~kv~~~~P~----~t~~GH~--g~V~alk~n~tg 371 (524)
T KOG0273|consen 310 ---------VKQQFEFHSAPALDVDWQSN-DEFATSST-D-GCIHVCKVGEDRPV----KTFIGHH--GEVNALKWNPTG 371 (524)
T ss_pred ---------EEEeeeeccCCccceEEecC-ceEeecCC-C-ceEEEEEecCCCcc----eeeeccc--CceEEEEECCCC
Confidence 121111 11111222 5433 33443222 2 23446666655543 6666544 445566665547
Q ss_pred EEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCccc--------ceEEEEEecCCCCceEEEEeC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY--------NEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~--------~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|+.+.+.|+ .|.+|+...+.....+....-.|..+.++|.+ +..+++.++. ..+-.||+
T Consensus 372 ~LLaS~SdD~--TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~d---stV~lwdv 439 (524)
T KOG0273|consen 372 SLLASCSDDG--TLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFD---STVKLWDV 439 (524)
T ss_pred ceEEEecCCC--eeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecC---CeEEEEEc
Confidence 8888888874 68888865554444454443344455555442 3344443332 36778888
No 262
>KOG0289|consensus
Probab=97.86 E-value=0.0036 Score=63.64 Aligned_cols=235 Identities=15% Similarity=0.168 Sum_probs=135.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..+..+|....++ .|.+...+.++|-.+++.+..-.++. ......++||...++-.+.+.
T Consensus 222 i~ald~~~s~~~il-----TGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~------------- 283 (506)
T KOG0289|consen 222 ITALDIIPSSSKIL-----TGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADE------------- 283 (506)
T ss_pred eeEEeecCCCCcce-----ecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcc-------------
Confidence 44555666544443 34455578888988887665444333 335677788887666554432
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
.|++|..+........ ...+. -+..+...|.|.|++-.+++ ..+-..|..+| .........
T Consensus 284 ---~i~vws~~~~s~~~~~--~~h~~--~V~~ls~h~tgeYllsAs~d----~~w~Fsd~~~g--------~~lt~vs~~ 344 (506)
T KOG0289|consen 284 ---IIRVWSVPLSSEPTSS--RPHEE--PVTGLSLHPTGEYLLSASND----GTWAFSDISSG--------SQLTVVSDE 344 (506)
T ss_pred ---eEEeeccccccCcccc--ccccc--cceeeeeccCCcEEEEecCC----ceEEEEEccCC--------cEEEEEeec
Confidence 5777777655432221 11111 34567888999998754433 22333455552 122222221
Q ss_pred -ccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 303 -MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 303 -~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
.+-.+. .|.||| ++|.+. ..++.|-.||++.+. + ..-+++. ...+..+.+..+++.++...+++ .+.
T Consensus 345 ~s~v~~ts~~fHpDg--Lifgtg--t~d~~vkiwdlks~~--~-~a~Fpgh-t~~vk~i~FsENGY~Lat~add~--~V~ 414 (506)
T KOG0289|consen 345 TSDVEYTSAAFHPDG--LIFGTG--TPDGVVKIWDLKSQT--N-VAKFPGH-TGPVKAISFSENGYWLATAADDG--SVK 414 (506)
T ss_pred cccceeEEeeEcCCc--eEEecc--CCCceEEEEEcCCcc--c-cccCCCC-CCceeEEEeccCceEEEEEecCC--eEE
Confidence 111222 388887 455443 345678889998754 1 2234443 45677777777787777777775 399
Q ss_pred EEECCCCceeeeeCCCC-ceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTGKRLHSFPLDL-GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~-g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|||.--+..+.++.+. ..+.+++++..|..+.+..++ -++|.++-
T Consensus 415 lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~----l~Vy~~~k 461 (506)
T KOG0289|consen 415 LWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD----LQVYICKK 461 (506)
T ss_pred EEEehhhcccceeeccccccceeEEEcCCCCeEEeecce----eEEEEEec
Confidence 99996555556666652 245577777777766665332 25777764
No 263
>KOG1274|consensus
Probab=97.85 E-value=0.0093 Score=66.38 Aligned_cols=241 Identities=12% Similarity=0.134 Sum_probs=138.0
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
++.+...+.|-|||+.|. +...+| .|.+|+.-.-...+.++........+.+-++..|+-.+.
T Consensus 12 ht~G~t~i~~d~~gefi~-tcgsdg----~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~------------ 74 (933)
T KOG1274|consen 12 HTGGLTLICYDPDGEFIC-TCGSDG----DIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSE------------ 74 (933)
T ss_pred ccCceEEEEEcCCCCEEE-EecCCC----ceEEeecCCcccCCchhhccCceeEEEeecccceEEeec------------
Confidence 344567899999999655 443343 477777544423333443221122334455655554443
Q ss_pred cccCCcEEEEEECCCCCCCCeeE-EecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPV-VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.+.|.+++++.++...++. |+.+ ...++++-+|+++++-+ +...|.++++.+... ...
T Consensus 75 ----~~tv~~y~fps~~~~~iL~Rftlp-----~r~~~v~g~g~~iaags----dD~~vK~~~~~D~s~--------~~~ 133 (933)
T KOG1274|consen 75 ----QNTVLRYKFPSGEEDTILARFTLP-----IRDLAVSGSGKMIAAGS----DDTAVKLLNLDDSSQ--------EKV 133 (933)
T ss_pred ----cceEEEeeCCCCCccceeeeeecc-----ceEEEEecCCcEEEeec----CceeEEEEeccccch--------hee
Confidence 2378999999887664432 2222 23578999999999643 336788888877321 122
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC-CceEeecCCCCc---eeEEEEE-eeCCEEEEEEEe
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENR---TLDVVAA-VANNKLIVHYIQ 372 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~---~~~~~~~-~~~~~l~~~~~~ 372 (734)
+.......... +.|.+..|+..+. +++|+.|++.++... .+..+.+..+.. ...-..| ++++++++...+
T Consensus 134 lrgh~apVl~l~~~p~~~fLAvss~----dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d 209 (933)
T KOG1274|consen 134 LRGHDAPVLQLSYDPKGNFLAVSSC----DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD 209 (933)
T ss_pred ecccCCceeeeeEcCCCCEEEEEec----CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC
Confidence 22222233333 7888887776554 357999999876421 233343333211 1222333 455677766554
Q ss_pred CCceeEEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ .|.+|+.++.+....+... ...+..+.++|.|.+++. ++. -..|.+||.
T Consensus 210 ~---~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA--s~~--~g~I~vWnv 261 (933)
T KOG1274|consen 210 N---TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA--STL--DGQILVWNV 261 (933)
T ss_pred C---eEEEEccCCceeheeecccccccceEEEEEcCCCcEEee--ecc--CCcEEEEec
Confidence 4 6888888777665555443 223667888998866553 222 246667776
No 264
>KOG4497|consensus
Probab=97.84 E-value=0.003 Score=61.88 Aligned_cols=93 Identities=11% Similarity=0.093 Sum_probs=52.9
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC-CEEEEEEEeCCceeEEEEECCCCc
Q psy4818 309 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-NKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 309 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
.|++|...+. ..|...++. |+++|+...+ +..++.+. ..+..+.+..+ -++++.. |.++||.|.+ +|-
T Consensus 325 afs~Ds~y~a-Trnd~~Pna-lW~Wdlq~l~---l~avLiQk--~piraf~WdP~~prL~vct---g~srLY~W~p-sg~ 393 (447)
T KOG4497|consen 325 AFSCDSTYAA-TRNDKYPNA-LWLWDLQNLK---LHAVLIQK--HPIRAFEWDPGRPRLVVCT---GKSRLYFWAP-SGP 393 (447)
T ss_pred eecCCceEEe-eecCCCCce-EEEEechhhh---hhhhhhhc--cceeEEEeCCCCceEEEEc---CCceEEEEcC-CCc
Confidence 3888865433 445555554 9999997654 33344443 34455555543 3566654 4578999998 674
Q ss_pred eeeeeCCCCceEEeeccCcccceEE
Q psy4818 388 RLHSFPLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 388 ~~~~l~~~~g~v~~~~~~~d~~~l~ 412 (734)
..-..+.+-..|..+.+.-++.-++
T Consensus 394 ~~V~vP~~GF~i~~l~W~~~g~~i~ 418 (447)
T KOG4497|consen 394 RVVGVPKKGFNIQKLQWLQPGEFIV 418 (447)
T ss_pred eEEecCCCCceeeeEEecCCCcEEE
Confidence 3223333323455565655554433
No 265
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.80 E-value=0.0028 Score=63.33 Aligned_cols=121 Identities=12% Similarity=0.056 Sum_probs=71.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..+..+++||||+.+|+..... ....|++....+...... .......++|++|| ++++.....
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~--~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g-~~W~v~~~~------------ 86 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGD--GGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDG-WVWTVDDGS------------ 86 (253)
T ss_pred ccccceEECCCCCeEEEEEEcC--CCCEEEEEcCCCcceeec--cCCccccccccCCC-CEEEEEcCC------------
Confidence 3477899999999999988322 336899987655433222 22245789999996 455554321
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
....+.+ +..++....+.+ ..+....-+..+.+||||.++++....... .+|++.-+.
T Consensus 87 -~~~~~~~-~~~~g~~~~~~v-~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~-~~v~va~V~ 144 (253)
T PF10647_consen 87 -GGVRVVR-DSASGTGEPVEV-DWPGLRGRITALRVSPDGTRVAVVVEDGGG-GRVYVAGVV 144 (253)
T ss_pred -CceEEEE-ecCCCcceeEEe-cccccCCceEEEEECCCCcEEEEEEecCCC-CeEEEEEEE
Confidence 1112222 111222111111 111111145689999999999999866444 688887654
No 266
>KOG2048|consensus
Probab=97.80 E-value=0.025 Score=60.94 Aligned_cols=159 Identities=12% Similarity=0.118 Sum_probs=91.5
Q ss_pred CeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc---c-cceEEEEEecCCeEEEEeCCC
Q psy4818 249 RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG---M-DHHHEIIANNGPELIVKTTKN 324 (734)
Q Consensus 249 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~---~-~~~~~~~s~dg~~l~~~s~~~ 324 (734)
...+...+.||||.+|++..-. ...||.+.-+. .+ ....+-.. . ....-.++-|+..+++.+..
T Consensus 382 ~~nIs~~aiSPdg~~Ia~st~~---~~~iy~L~~~~----~v----k~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~- 449 (691)
T KOG2048|consen 382 KENISCAAISPDGNLIAISTVS---RTKIYRLQPDP----NV----KVINVDDVPLALLDASAISFTIDKNKLFLVSKN- 449 (691)
T ss_pred ccceeeeccCCCCCEEEEeecc---ceEEEEeccCc----ce----eEEEeccchhhhccceeeEEEecCceEEEEecc-
Confidence 3466778999999999986532 13455444332 11 11111000 1 11122388899988888732
Q ss_pred CCCceEEEEecCCCCCCCceEeecCCCCceeE-EEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC-CCCceEEee
Q psy4818 325 APKGKVVTINLNNPCEKNWKTLIPEDENRTLD-VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHI 402 (734)
Q Consensus 325 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~-~~~g~v~~~ 402 (734)
.+.|..++++++.......+.+...-..+. -+...+|+++++.. ....+++|++++++. +.+. .....+...
T Consensus 450 --~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~~-~~l~~rln~~vTa~ 523 (691)
T KOG2048|consen 450 --IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLES-HLLKVRLNIDVTAA 523 (691)
T ss_pred --cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEccccee-ecchhccCcceeee
Confidence 356888888876543344444442122233 33445667777665 346899999987764 3333 223334455
Q ss_pred ccC-cccceEEEEEecCCCCceEEEEeC
Q psy4818 403 SGR-RKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 403 ~~~-~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+ ++.+.+++.+++ .++|.+|+
T Consensus 524 ~~~~~~~~~lvvats~----nQv~efdi 547 (691)
T KOG2048|consen 524 AFSPFVRNRLVVATSN----NQVFEFDI 547 (691)
T ss_pred eccccccCcEEEEecC----CeEEEEec
Confidence 555 345678777765 37999999
No 267
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.79 E-value=0.00069 Score=71.30 Aligned_cols=85 Identities=18% Similarity=0.095 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCeEEEEEecccCCCCCchhhhccc--cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHH
Q psy4818 508 ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR--LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 585 (734)
Q Consensus 508 ~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~ 585 (734)
....+.|.. |+-|.+.|-+ .+.. ...+...++|.+..+...++. +.++ +.++|.|+||.+++++
T Consensus 120 RS~V~~Ll~-g~dVYl~DW~----------~p~~vp~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa 185 (406)
T TIGR01849 120 RSTVEALLP-DHDVYITDWV----------NARMVPLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAA 185 (406)
T ss_pred HHHHHHHhC-CCcEEEEeCC----------CCCCCchhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHH
Confidence 345566776 9999998853 3321 123556678877654444433 3455 9999999999998876
Q ss_pred HhcC-----CCceeEEEEcCCcchhc
Q psy4818 586 LNQR-----PELYGAALILVGALDML 606 (734)
Q Consensus 586 ~~~~-----p~~~~a~v~~~~~~d~~ 606 (734)
++.. |+..+.+++..+.+|..
T Consensus 186 ~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 186 VALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HHHHHhcCCCCCcceEEEEecCccCC
Confidence 6543 55678888877776654
No 268
>KOG1273|consensus
Probab=97.78 E-value=0.0027 Score=61.89 Aligned_cols=226 Identities=11% Similarity=0.143 Sum_probs=115.1
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
+...+.+++||+||++|.-++. ...|.+||+..|.++.....+..+.+..|.|-.+..+.+..-+.
T Consensus 64 H~~pi~sl~WS~dgr~LltsS~-----D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~--------- 129 (405)
T KOG1273|consen 64 HVRPITSLCWSRDGRKLLTSSR-----DWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEE--------- 129 (405)
T ss_pred cccceeEEEecCCCCEeeeecC-----CceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecC---------
Confidence 4456889999999999986553 25799999999987654433333456777775554444432111
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEE---EEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS---EVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~---~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.-++..++.+ ...++-..++.. ....+ .+.+-|++|+. ++....+.+++.++.+ ++ .+
T Consensus 130 ------sp~vi~~s~~--~h~~Lp~d~d~d-ln~sas~~~fdr~g~yIit----GtsKGkllv~~a~t~e--~v----as 190 (405)
T KOG1273|consen 130 ------SPVVIDFSDP--KHSVLPKDDDGD-LNSSASHGVFDRRGKYIIT----GTSKGKLLVYDAETLE--CV----AS 190 (405)
T ss_pred ------CcEEEEecCC--ceeeccCCCccc-cccccccccccCCCCEEEE----ecCcceEEEEecchhe--ee----ee
Confidence 1223333321 111111111111 11222 37888999973 3344688889988821 11 11
Q ss_pred eeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCC---CCCCCceEeecCCC-Ccee---E--EEEEeeCCEE
Q psy4818 297 KTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN---PCEKNWKTLIPEDE-NRTL---D--VVAAVANNKL 366 (734)
Q Consensus 297 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~~-~~~~---~--~~~~~~~~~l 366 (734)
-+++. ....-. .++..|+.|++-+.. .-|-.+++.. ... -.++.+... .+++ + .+.+.. +..
T Consensus 191 ~rits-~~~IK~I~~s~~g~~liiNtsD----RvIR~ye~~di~~~~r--~~e~e~~~K~qDvVNk~~Wk~ccfs~-dge 262 (405)
T KOG1273|consen 191 FRITS-VQAIKQIIVSRKGRFLIINTSD----RVIRTYEISDIDDEGR--DGEVEPEHKLQDVVNKLQWKKCCFSG-DGE 262 (405)
T ss_pred eeech-heeeeEEEEeccCcEEEEecCC----ceEEEEehhhhcccCc--cCCcChhHHHHHHHhhhhhhheeecC-Ccc
Confidence 11211 111112 277788877765443 2244455431 100 011111000 0111 1 122222 334
Q ss_pred EEEEEeCCceeEEEEECCCCceeeeeCCCCce-EEeeccCc
Q psy4818 367 IVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQ-ITHISGRR 406 (734)
Q Consensus 367 ~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~-v~~~~~~~ 406 (734)
|+.+.......||+|....|..++.|.++.|. ...+.+.|
T Consensus 263 Yv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp 303 (405)
T KOG1273|consen 263 YVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHP 303 (405)
T ss_pred EEEeccccceeEEEEecCCcceeeeecCCchhheeeccccc
Confidence 44443344468999998889888888776543 22444444
No 269
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.77 E-value=9e-05 Score=80.94 Aligned_cols=127 Identities=15% Similarity=0.110 Sum_probs=72.6
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh--ccccccC---
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN--AGRLLKK--- 545 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~--~~~~~~~--- 545 (734)
-.-+.+.-..+-..+ .|++|++-| -+.... ......+..+..+.|..+++...|- ||...-- ......+
T Consensus 14 f~qRY~~n~~~~~~~-gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~s~~nL~yLt 88 (434)
T PF05577_consen 14 FSQRYWVNDQYYKPG-GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRY---YGKSQPFGDLSTENLRYLT 88 (434)
T ss_dssp EEEEEEEE-TT--TT-SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TT---STTB-TTGGGGGSTTTC-S
T ss_pred EEEEEEEEhhhcCCC-CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhh---hcCCCCccccchhhHHhcC
Confidence 333444444443223 889888844 332211 1112234466667799999999998 7765421 1111111
Q ss_pred -CCchhHHHHHHHHHHHcC-CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 546 -QNCFDDFQAAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 546 -~~~~~D~~~~~~~l~~~~-~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
...++|+..-++++..+. ..+..+++++|+||||.|++++-.++|++|.++++.++.+
T Consensus 89 ~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 89 SEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 234778888888887553 3355699999999999999999999999998888766644
No 270
>KOG0282|consensus
Probab=97.75 E-value=0.00066 Score=69.74 Aligned_cols=241 Identities=9% Similarity=0.065 Sum_probs=131.7
Q ss_pred CCcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCC-CCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 139 DGTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 139 ~~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~-g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
+++-+++.+.|.| .|..|+ +.. -...|+||++-+ ++.++.-.+.. .+..+.||.+|..|+-+++|.
T Consensus 212 gH~kgvsai~~fp~~~hLlL-S~g----mD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~------ 280 (503)
T KOG0282|consen 212 GHTKGVSAIQWFPKKGHLLL-SGG----MDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDR------ 280 (503)
T ss_pred CCccccchhhhccceeeEEE-ecC----CCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecce------
Confidence 4566788999999 555444 332 336799999876 65555433322 236889999999999888865
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.|.+|+..|++.. .-|.... ....+.+.||+..+++... ....|..||+.+++ +
T Consensus 281 ----------~lKlwDtETG~~~--~~f~~~~---~~~cvkf~pd~~n~fl~G~---sd~ki~~wDiRs~k---v----- 334 (503)
T KOG0282|consen 281 ----------FLKLWDTETGQVL--SRFHLDK---VPTCVKFHPDNQNIFLVGG---SDKKIRQWDIRSGK---V----- 334 (503)
T ss_pred ----------eeeeeccccceEE--EEEecCC---CceeeecCCCCCcEEEEec---CCCcEEEEeccchH---H-----
Confidence 6888898888532 2233221 2345789999977777543 33789999998832 1
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
++..-.+....... |-++|++++-.++.. .+..|+...+.. .+.+.... ......+....++..++..+-+
T Consensus 335 vqeYd~hLg~i~~i~F~~~g~rFissSDdk----s~riWe~~~~v~--ik~i~~~~-~hsmP~~~~~P~~~~~~aQs~d- 406 (503)
T KOG0282|consen 335 VQEYDRHLGAILDITFVDEGRRFISSSDDK----SVRIWENRIPVP--IKNIADPE-MHTMPCLTLHPNGKWFAAQSMD- 406 (503)
T ss_pred HHHHHhhhhheeeeEEccCCceEeeeccCc----cEEEEEcCCCcc--chhhcchh-hccCcceecCCCCCeehhhccC-
Confidence 01000111111222 667888777655543 355555544331 12222111 2222223322223333332222
Q ss_pred ceeEEEEECCCCc---eeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 375 RSVMDLHDLNTGK---RLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 ~~~l~~~dl~~g~---~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..++++.+..-- ..+.+... .|.-..+.+|||++.|. +.++ -+.++.||.
T Consensus 407 -N~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~-SGds---dG~v~~wdw 461 (503)
T KOG0282|consen 407 -NYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLC-SGDS---DGKVNFWDW 461 (503)
T ss_pred -ceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEE-eecC---CccEEEeec
Confidence 345555431100 01233332 33333677889987554 3333 357899998
No 271
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.74 E-value=0.015 Score=58.12 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=118.6
Q ss_pred CeeEEEc-CCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 191 PSISWTH-DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 191 ~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
.+++.+| ++.-++|.+.+. ..+++++..+++.. .....+.+..|+....||+||++|+.+.+
T Consensus 8 H~~a~~p~~~~avafaRRPG---------------~~~~v~D~~~g~~~--~~~~a~~gRHFyGHg~fs~dG~~LytTEn 70 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPG---------------TFALVFDCRTGQLL--QRLWAPPGRHFYGHGVFSPDGRLLYTTEN 70 (305)
T ss_pred cceeeCCCCCeEEEEEeCCC---------------cEEEEEEcCCCcee--eEEcCCCCCEEecCEEEcCCCCEEEEecc
Confidence 4678889 555666666543 25677777776533 34444556667778899999999987765
Q ss_pred cCCC-CceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCC------C---------CCceEEEE
Q psy4818 270 NNTQ-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN------A---------PKGKVVTI 333 (734)
Q Consensus 270 ~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~------~---------~~~~l~~~ 333 (734)
+-.. ...|-+||+..+ -..+ ..+ -..+.......+.|||+.|++. |-+ . -...|..+
T Consensus 71 d~~~g~G~IgVyd~~~~-~~ri---~E~--~s~GIGPHel~l~pDG~tLvVA-NGGI~Thpd~GR~kLNl~tM~psL~~l 143 (305)
T PF07433_consen 71 DYETGRGVIGVYDAARG-YRRI---GEF--PSHGIGPHELLLMPDGETLVVA-NGGIETHPDSGRAKLNLDTMQPSLVYL 143 (305)
T ss_pred ccCCCcEEEEEEECcCC-cEEE---eEe--cCCCcChhhEEEcCCCCEEEEE-cCCCccCcccCceecChhhcCCceEEE
Confidence 4322 268899999841 1110 000 0111122222388999887764 311 1 12346667
Q ss_pred ecCCCCCCCceE-eec-CCCCceeEEEEEeeCCEEEEEEEeCC-----ceeEEEEECCCCceeeeeCCC-------CceE
Q psy4818 334 NLNNPCEKNWKT-LIP-EDENRTLDVVAAVANNKLIVHYIQNV-----RSVMDLHDLNTGKRLHSFPLD-------LGQI 399 (734)
Q Consensus 334 d~~~~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~l~~~dl~~g~~~~~l~~~-------~g~v 399 (734)
|..+++. ... -++ ......+.-+.+..++.+++.....+ .+-|.+++. |+.++.+..+ .+.+
T Consensus 144 d~~sG~l--l~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~ 219 (305)
T PF07433_consen 144 DARSGAL--LEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYI 219 (305)
T ss_pred ecCCCce--eeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCce
Confidence 6666541 111 122 22223455555655556665554333 245666654 4434555443 3567
Q ss_pred EeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy4818 400 THISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 437 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~ 437 (734)
.++..+.+++.++++ |+. -..+..+|. +++
T Consensus 220 gSIa~~~~g~~ia~t--sPr-Gg~~~~~d~-----~tg 249 (305)
T PF07433_consen 220 GSIAADRDGRLIAVT--SPR-GGRVAVWDA-----ATG 249 (305)
T ss_pred EEEEEeCCCCEEEEE--CCC-CCEEEEEEC-----CCC
Confidence 778888887766654 443 356888888 566
No 272
>KOG0265|consensus
Probab=97.73 E-value=0.0017 Score=62.97 Aligned_cols=193 Identities=12% Similarity=0.086 Sum_probs=113.0
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
....|+|||..|+-...| ++|++|++-.... ...+. +.+.+-+.++.|++||+.|+-.
T Consensus 51 ~~~~F~P~gs~~aSgG~D----------------r~I~LWnv~gdce-N~~~l--kgHsgAVM~l~~~~d~s~i~S~--- 108 (338)
T KOG0265|consen 51 YTIKFHPDGSCFASGGSD----------------RAIVLWNVYGDCE-NFWVL--KGHSGAVMELHGMRDGSHILSC--- 108 (338)
T ss_pred EEEEECCCCCeEeecCCc----------------ceEEEEecccccc-ceeee--ccccceeEeeeeccCCCEEEEe---
Confidence 567899999877765543 3799998765432 22222 2345677899999999998732
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE--EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI--IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
+....++.||+++|... ++. .....-... .+..|..++-.. ..+..+.++|..+++ ...+++
T Consensus 109 -gtDk~v~~wD~~tG~~~--------rk~-k~h~~~vNs~~p~rrg~~lv~Sg---sdD~t~kl~D~R~k~---~~~t~~ 172 (338)
T KOG0265|consen 109 -GTDKTVRGWDAETGKRI--------RKH-KGHTSFVNSLDPSRRGPQLVCSG---SDDGTLKLWDIRKKE---AIKTFE 172 (338)
T ss_pred -cCCceEEEEecccceee--------ehh-ccccceeeecCccccCCeEEEec---CCCceEEEEeecccc---hhhccc
Confidence 23378999999995321 111 111111111 222344343322 234568889987654 122222
Q ss_pred CCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEe
Q psy4818 349 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 428 (734)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d 428 (734)
. ...+..+.+.+...-+++..-+ ..|.+||+..++.+..+......|.+++.++++..+. ..++. ..+-++|
T Consensus 173 ~--kyqltAv~f~d~s~qv~sggId--n~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~ll--snsMd--~tvrvwd 244 (338)
T KOG0265|consen 173 N--KYQLTAVGFKDTSDQVISGGID--NDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLL--SNSMD--NTVRVWD 244 (338)
T ss_pred c--ceeEEEEEecccccceeecccc--CceeeeccccCcceEEeecccCceeeEEeccCCCccc--ccccc--ceEEEEE
Confidence 2 2444555555544444444444 4799999976666667776666788888888886543 23333 2455555
Q ss_pred C
Q psy4818 429 I 429 (734)
Q Consensus 429 ~ 429 (734)
+
T Consensus 245 ~ 245 (338)
T KOG0265|consen 245 V 245 (338)
T ss_pred e
Confidence 5
No 273
>KOG1445|consensus
Probab=97.72 E-value=0.00064 Score=71.89 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=93.8
Q ss_pred CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-cc
Q psy4818 112 QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KF 190 (734)
Q Consensus 112 ~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~ 190 (734)
+.+-.||+.... |-++....|...-..+...+..+.|.|=-.-+.-+.+ -..+|.+||+.+++......+.. .+
T Consensus 649 dg~i~lWr~~a~-gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~as----yd~Ti~lWDl~~~~~~~~l~gHtdqI 723 (1012)
T KOG1445|consen 649 DGQINLWRLTAN-GLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVAS----YDSTIELWDLANAKLYSRLVGHTDQI 723 (1012)
T ss_pred CceEEEEEeccC-CCCcccCCcceeeecccceEEEEEecchhhhHhhhhh----ccceeeeeehhhhhhhheeccCcCce
Confidence 346677877654 3445555555544455567888999985543332222 23689999999987432222221 34
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCC-eeEEEEEEecCCcEEEEEEe
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR-SLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~-~~~~~~~~SpDG~~l~~~~~ 269 (734)
.+++|||||+.++-+..|. +|++++-.+... .+++.+.-- .....+.|-=||++|+++..
T Consensus 724 f~~AWSpdGr~~AtVcKDg----------------~~rVy~Prs~e~---pv~Eg~gpvgtRgARi~wacdgr~viv~Gf 784 (1012)
T KOG1445|consen 724 FGIAWSPDGRRIATVCKDG----------------TLRVYEPRSREQ---PVYEGKGPVGTRGARILWACDGRIVIVVGF 784 (1012)
T ss_pred eEEEECCCCcceeeeecCc----------------eEEEeCCCCCCC---ccccCCCCccCcceeEEEEecCcEEEEecc
Confidence 6899999999999887654 577776554422 345443211 12235678899999998876
Q ss_pred cCCCCceEEEEeCCC
Q psy4818 270 NNTQGSDLHYFDLHS 284 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~ 284 (734)
......+|-+||..+
T Consensus 785 dk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 785 DKSSERQVQMYDAQT 799 (1012)
T ss_pred cccchhhhhhhhhhh
Confidence 555556778888776
No 274
>KOG3253|consensus
Probab=97.71 E-value=0.00062 Score=72.16 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=100.0
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeE--EEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHH--
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGI--YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN-- 561 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~--v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-- 561 (734)
...|++++.||++...-...|...+.+.|.-.|-+ |..+|++-..+ +.+-....+-.+...++.+.
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig----------G~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG----------GANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC----------CcchHHHHHHHHHHhhhhhhhh
Confidence 35689999999883333333344455555544533 44445543110 01111122333333332222
Q ss_pred cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCC
Q psy4818 562 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 641 (734)
Q Consensus 562 ~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 641 (734)
.+......|.++|+|+|..+++.+...+-|.+-.++...++.+-. ..+. -|..++ ++..
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~-----vdgp-----rgirDE-----------~Lld 302 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT-----VDGP-----RGIRDE-----------ALLD 302 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC-----CCcc-----cCCcch-----------hhHh
Confidence 244456789999999998888888776666554444333332110 0000 133222 1122
Q ss_pred CCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 642 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 642 ~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
++.| +|++.|.+|.++++..-+++.+++++. +++++..+++|.+.
T Consensus 303 -------mk~P-VLFV~Gsnd~mcspn~ME~vreKMqA~----------~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 -------MKQP-VLFVIGSNDHMCSPNSMEEVREKMQAE----------VELHVIGGADHSMA 347 (784)
T ss_pred -------cCCc-eEEEecCCcccCCHHHHHHHHHHhhcc----------ceEEEecCCCcccc
Confidence 4445 999999999999999999999998765 57899999999875
No 275
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.70 E-value=0.067 Score=64.64 Aligned_cols=248 Identities=8% Similarity=0.018 Sum_probs=124.1
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-c----------c---cccCeeEEEcCCcEEEEEEEecC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-K----------N---VKFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~----------~---~~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
+++++++++..|.++ +... ..|+++|..+........ + . ....++++.+++..||++..
T Consensus 571 ~gvavd~~~g~lyVa-Ds~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt--- 643 (1057)
T PLN02919 571 GKLAIDLLNNRLFIS-DSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADT--- 643 (1057)
T ss_pred ceEEEECCCCeEEEE-ECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeC---
Confidence 468898877665544 4332 478999986543211100 0 0 02367889998876655432
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecC--------CC-------CeeEEEEEEecCCcEEEEEEecCCCCc
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP--------NG-------RSLGLHSEVTDCGRYLLVSTSNNTQGS 275 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~--------~~-------~~~~~~~~~SpDG~~l~~~~~~~~~~~ 275 (734)
....|.++++.++. +..+... .. -..-.+++++|++..|++... ...
T Consensus 644 ------------~n~~Ir~id~~~~~---V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~---~~~ 705 (1057)
T PLN02919 644 ------------ENHALREIDFVNET---VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA---GQH 705 (1057)
T ss_pred ------------CCceEEEEecCCCE---EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC---CCC
Confidence 12356666654432 1111100 00 001136899998777776532 336
Q ss_pred eEEEEeCCCCCCCcccCCCCceee------eccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTV------IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l------~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
.|+++|..++....+......... ......-.. .+++||+.||+... .+.+|.++|++++. ...+..
T Consensus 706 ~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---~n~~Irv~D~~tg~---~~~~~g 779 (1057)
T PLN02919 706 QIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---ESSSIRALDLKTGG---SRLLAG 779 (1057)
T ss_pred eEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC---CCCeEEEEECCCCc---EEEEEe
Confidence 899999876321111000000000 000111111 38899998887543 24679999987654 111111
Q ss_pred CC-------------CC-------ceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-C-----------
Q psy4818 349 ED-------------EN-------RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-L----------- 396 (734)
Q Consensus 349 ~~-------------~~-------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~----------- 396 (734)
.. +. ....++.+..++.+|++... ...|.+||+.++...+..... .
T Consensus 780 g~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~--N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~ 857 (1057)
T PLN02919 780 GDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSY--NHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQ 857 (1057)
T ss_pred cccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECC--CCEEEEEECCCCeEEEEeccCCcCCCCCcccccc
Confidence 00 00 00123334444567666543 368999999766543222110 0
Q ss_pred -ceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 397 -GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 397 -g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
....++..+++++ ++++- +.+ ..+.++|+
T Consensus 858 l~~P~GIavd~dG~-lyVaD-t~N--n~Irvid~ 887 (1057)
T PLN02919 858 LSEPAGLALGENGR-LFVAD-TNN--SLIRYLDL 887 (1057)
T ss_pred cCCceEEEEeCCCC-EEEEE-CCC--CEEEEEEC
Confidence 1223556667764 55543 332 37888998
No 276
>KOG0284|consensus
Probab=97.70 E-value=0.00044 Score=69.50 Aligned_cols=192 Identities=10% Similarity=0.141 Sum_probs=114.9
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
+..+.|+|+|++|+..+... ..-+|+.-+-.-+ .+.+. ++.-+....||++|.|++
T Consensus 99 V~~v~WtPeGRRLltgs~SG----------------EFtLWNg~~fnFE--tilQa--HDs~Vr~m~ws~~g~wmi---- 154 (464)
T KOG0284|consen 99 VNVVRWTPEGRRLLTGSQSG----------------EFTLWNGTSFNFE--TILQA--HDSPVRTMKWSHNGTWMI---- 154 (464)
T ss_pred eeeEEEcCCCceeEeecccc----------------cEEEecCceeeHH--HHhhh--hcccceeEEEccCCCEEE----
Confidence 36789999999999877532 2233332111111 12222 233466789999999987
Q ss_pred cCCCCceEEEEeCCCCCCCcccCCCCceeeec-cc-cceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe
Q psy4818 270 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GM-DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 346 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~-~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 346 (734)
++....-|.+|+..-. . ...+. .. ..... .+||...+|+-.++ ++.|-++|..-..+ ..+
T Consensus 155 SgD~gG~iKyWqpnmn-n---------Vk~~~ahh~eaIRdlafSpnDskF~t~Sd----Dg~ikiWdf~~~ke---e~v 217 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPNMN-N---------VKIIQAHHAEAIRDLAFSPNDSKFLTCSD----DGTIKIWDFRMPKE---ERV 217 (464)
T ss_pred EcCCCceEEecccchh-h---------hHHhhHhhhhhhheeccCCCCceeEEecC----CCeEEEEeccCCch---hhe
Confidence 3233356777776541 0 11111 11 11222 38887666654443 34588888765442 223
Q ss_pred ecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEE
Q psy4818 347 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 426 (734)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~ 426 (734)
+.+. +..+..+.|-....++++..++. -+.+||..+|..+-.+......|..+.++++++ ++.+.+... .+-.
T Consensus 218 L~GH-gwdVksvdWHP~kgLiasgskDn--lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N-~Llt~skD~---~~kv 290 (464)
T KOG0284|consen 218 LRGH-GWDVKSVDWHPTKGLIASGSKDN--LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGN-WLLTGSKDQ---SCKV 290 (464)
T ss_pred eccC-CCCcceeccCCccceeEEccCCc--eeEeecCCCcchhhhhhhccceEEEEEEcCCCC-eeEEccCCc---eEEE
Confidence 3333 34456666665578888887774 789999999988767766666788899999884 444444332 4666
Q ss_pred EeC
Q psy4818 427 CNI 429 (734)
Q Consensus 427 ~d~ 429 (734)
+|+
T Consensus 291 ~Di 293 (464)
T KOG0284|consen 291 FDI 293 (464)
T ss_pred Eeh
Confidence 776
No 277
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.70 E-value=0.00034 Score=64.46 Aligned_cols=98 Identities=11% Similarity=0.031 Sum_probs=64.9
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
++|++-|-.|+. .+...++..|+++|+.|+-+|-+- -|.. ....+....|+.+.+++..++ -..+|
T Consensus 4 ~~v~~SGDgGw~---~~d~~~a~~l~~~G~~VvGvdsl~------Yfw~---~rtP~~~a~Dl~~~i~~y~~~--w~~~~ 69 (192)
T PF06057_consen 4 LAVFFSGDGGWR---DLDKQIAEALAKQGVPVVGVDSLR------YFWS---ERTPEQTAADLARIIRHYRAR--WGRKR 69 (192)
T ss_pred EEEEEeCCCCch---hhhHHHHHHHHHCCCeEEEechHH------HHhh---hCCHHHHHHHHHHHHHHHHHH--hCCce
Confidence 344444433443 455667788899999999999542 1121 112234467777777776655 23468
Q ss_pred EEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCC
Q psy4818 570 ITIMGGSNGGLLVGACLNQRPEL----YGAALILVG 601 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~ 601 (734)
+.++|.|.|+=+...+.++-|.- ++.+++.+|
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHHHHhheeEEEEecc
Confidence 99999999999999999988874 455555554
No 278
>KOG0640|consensus
Probab=97.70 E-value=0.0011 Score=64.28 Aligned_cols=209 Identities=18% Similarity=0.229 Sum_probs=118.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC------------CC-----cccccc-ccc-ccCeeEEEcCCcEEEE
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT------------GK-----DYPEVL-KNV-KFPSISWTHDHKGFFY 204 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~------------g~-----~~~~~~-~~~-~~~~~~wSpDg~~l~y 204 (734)
....+|||||..+| .|+-...|.++|++. |. ++..+. ..+ .+..+.|.|-..-|+-
T Consensus 115 cR~aafs~DG~lvA-----TGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS 189 (430)
T KOG0640|consen 115 CRAAAFSPDGSLVA-----TGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS 189 (430)
T ss_pred eeeeeeCCCCcEEE-----ccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence 45689999999998 455667899999861 11 111111 111 1256777776643333
Q ss_pred EEEecCCCCCCCCcccccCCcEEEEEECCCCCCC-CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 205 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK-DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~-~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
.+. ...|.+.+......+ .-.+|++. ..+.++++.|.|.+|++- ++...+.++|++
T Consensus 190 ~sr----------------D~tvKlFDfsK~saKrA~K~~qd~---~~vrsiSfHPsGefllvg----TdHp~~rlYdv~ 246 (430)
T KOG0640|consen 190 GSR----------------DNTVKLFDFSKTSAKRAFKVFQDT---EPVRSISFHPSGEFLLVG----TDHPTLRLYDVN 246 (430)
T ss_pred ccC----------------CCeEEEEecccHHHHHHHHHhhcc---ceeeeEeecCCCceEEEe----cCCCceeEEecc
Confidence 332 225666666543221 11234332 245689999999999863 334678889998
Q ss_pred CCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec-CCCCceeEEEEEe
Q psy4818 284 SLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-EDENRTLDVVAAV 361 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 361 (734)
+ .+++....|-. ........+ .++.|+ +|+....+ +.|-+||--+.. +.+-+. ..++..+.+..++
T Consensus 247 T--~QcfvsanPd~---qht~ai~~V~Ys~t~~-lYvTaSkD---G~IklwDGVS~r---Cv~t~~~AH~gsevcSa~Ft 314 (430)
T KOG0640|consen 247 T--YQCFVSANPDD---QHTGAITQVRYSSTGS-LYVTASKD---GAIKLWDGVSNR---CVRTIGNAHGGSEVCSAVFT 314 (430)
T ss_pred c--eeEeeecCccc---ccccceeEEEecCCcc-EEEEeccC---CcEEeeccccHH---HHHHHHhhcCCceeeeEEEc
Confidence 8 22221111111 011122223 666654 77776654 357777754332 222222 2234556677777
Q ss_pred eCCEEEEEEEeCCceeEEEEECCCCceeeeeCC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 394 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~ 394 (734)
.+++.+++...+ +.+++|.+.+|..+++.+.
T Consensus 315 kn~kyiLsSG~D--S~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 315 KNGKYILSSGKD--STVKLWEISTGRMLKEYTG 345 (430)
T ss_pred cCCeEEeecCCc--ceeeeeeecCCceEEEEec
Confidence 767777766555 6899999988987766654
No 279
>KOG0284|consensus
Probab=97.68 E-value=0.0011 Score=66.80 Aligned_cols=228 Identities=9% Similarity=0.016 Sum_probs=122.6
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+...+....||+||.++. +|+....|.+|+..-........ ....+..+++||....|+-++.|.
T Consensus 137 HDs~Vr~m~ws~~g~wmi-----SgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg--------- 202 (464)
T KOG0284|consen 137 HDSPVRTMKWSHNGTWMI-----SGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDG--------- 202 (464)
T ss_pred hcccceeEEEccCCCEEE-----EcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCC---------
Confidence 345688999999999876 23333578888865432211111 111235788999666565555433
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|.+|+.--...+.++ ... .-..-++.|.|.-..|+- . +..+-|.+||..+|. +| -.
T Consensus 203 -------~ikiWdf~~~kee~vL--~GH--gwdVksvdWHP~kgLias-g---skDnlVKlWDprSg~--cl------~t 259 (464)
T KOG0284|consen 203 -------TIKIWDFRMPKEERVL--RGH--GWDVKSVDWHPTKGLIAS-G---SKDNLVKLWDPRSGS--CL------AT 259 (464)
T ss_pred -------eEEEEeccCCchhhee--ccC--CCCcceeccCCccceeEE-c---cCCceeEeecCCCcc--hh------hh
Confidence 5777776655544333 221 112347899998776662 2 233689999998842 22 11
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
+-......... |++++.+|+-.+. +..+-++|+.+-+ .+...-.+. ..+......+-...|+.+...+| .
T Consensus 260 lh~HKntVl~~~f~~n~N~Llt~sk----D~~~kv~DiR~mk--El~~~r~Hk-kdv~~~~WhP~~~~lftsgg~Dg--s 330 (464)
T KOG0284|consen 260 LHGHKNTVLAVKFNPNGNWLLTGSK----DQSCKVFDIRTMK--ELFTYRGHK-KDVTSLTWHPLNESLFTSGGSDG--S 330 (464)
T ss_pred hhhccceEEEEEEcCCCCeeEEccC----CceEEEEehhHhH--HHHHhhcch-hhheeeccccccccceeeccCCC--c
Confidence 22222222233 9999976664433 3457778886422 112111122 22322222222245666655554 5
Q ss_pred EEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEE
Q psy4818 378 MDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~ 414 (734)
|+.|.+...+.+..+... ++.|-++.+.|=| .++.+
T Consensus 331 vvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlG-hil~t 367 (464)
T KOG0284|consen 331 VVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLG-HILAT 367 (464)
T ss_pred eEEEeccccccccCCCcccccceeeeeccccc-eeEee
Confidence 666665323333334322 6677778887766 34444
No 280
>KOG2315|consensus
Probab=97.67 E-value=0.0063 Score=64.05 Aligned_cols=234 Identities=15% Similarity=0.085 Sum_probs=133.5
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
.++||+|....|..+. ..++++++.+-+...-.+....++.+..||-+.--+....-.. ..+.+.
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe---------~kGaPa 194 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPE---------KKGAPA 194 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccC---------CCCCCc
Confidence 5889999998887663 3588888776332222233334578889987553333333211 134455
Q ss_pred EEEEEECCCCCCCC----eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC--------CceEEEEeCCCCCCCcccCC
Q psy4818 226 KIYYHVLGTEQDKD----IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--------GSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 226 ~l~~~~l~t~~~~~----~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.++......... ...|.. .-....|.+-|.-|++.....-+ ...||+++.++ ..
T Consensus 195 ~vri~~~~~~~~~~~~a~ksFFka-----dkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g-~s------ 262 (566)
T KOG2315|consen 195 SVRIYKYPEEGQHQPVANKSFFKA-----DKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG-ES------ 262 (566)
T ss_pred EEEEeccccccccchhhhcccccc-----ceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC-ce------
Confidence 66666655221111 111111 11467899999888766543211 16899999885 21
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
....| ......+.+ |+++|+.+.++-.-- -.++-.+|++... .--++++++..+ .+.+.++.+++..-.
T Consensus 263 -~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfM--PAkvtifnlr~~~----v~df~egpRN~~--~fnp~g~ii~lAGFG 332 (566)
T KOG2315|consen 263 -VSVPL-LKEGPVHDVTWSPSGREFAVVYGFM--PAKVTIFNLRGKP----VFDFPEGPRNTA--FFNPHGNIILLAGFG 332 (566)
T ss_pred -EEEec-CCCCCceEEEECCCCCEEEEEEecc--cceEEEEcCCCCE----eEeCCCCCccce--EECCCCCEEEEeecC
Confidence 11122 223445555 999999988775421 2357777876542 333444434332 222344555555556
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
+-...+.+||..+-+.+..+.....+ -+.++|||..++...+++
T Consensus 333 NL~G~mEvwDv~n~K~i~~~~a~~tt--~~eW~PdGe~flTATTaP 376 (566)
T KOG2315|consen 333 NLPGDMEVWDVPNRKLIAKFKAANTT--VFEWSPDGEYFLTATTAP 376 (566)
T ss_pred CCCCceEEEeccchhhccccccCCce--EEEEcCCCcEEEEEeccc
Confidence 66779999999775554444433333 477899998777666553
No 281
>KOG0645|consensus
Probab=97.66 E-value=0.0092 Score=57.18 Aligned_cols=188 Identities=9% Similarity=0.072 Sum_probs=102.9
Q ss_pred cCeeEEEcC-CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-CCeeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy4818 190 FPSISWTHD-HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 267 (734)
Q Consensus 190 ~~~~~wSpD-g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~ 267 (734)
...++|.|- |. |+++... ...|.++...++.. .-+.+..+ .+...+.+++|||.|++|+-.
T Consensus 17 ~W~~awhp~~g~-ilAscg~---------------Dk~vriw~~~~~~s~~ck~vld~-~hkrsVRsvAwsp~g~~La~a 79 (312)
T KOG0645|consen 17 VWSVAWHPGKGV-ILASCGT---------------DKAVRIWSTSSGDSWTCKTVLDD-GHKRSVRSVAWSPHGRYLASA 79 (312)
T ss_pred EEEEEeccCCce-EEEeecC---------------CceEEEEecCCCCcEEEEEeccc-cchheeeeeeecCCCcEEEEe
Confidence 468999997 54 4444432 22677777764221 11112222 233456789999999999854
Q ss_pred EecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT 345 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 345 (734)
+-+ ..+-+|.-.+++ ......+.+.+.... .|+++|..|+-.+.. -.++.+.++......+..
T Consensus 80 SFD----~t~~Iw~k~~~e-------fecv~~lEGHEnEVK~Vaws~sG~~LATCSRD----KSVWiWe~deddEfec~a 144 (312)
T KOG0645|consen 80 SFD----ATVVIWKKEDGE-------FECVATLEGHENEVKCVAWSASGNYLATCSRD----KSVWIWEIDEDDEFECIA 144 (312)
T ss_pred ecc----ceEEEeecCCCc-------eeEEeeeeccccceeEEEEcCCCCEEEEeeCC----CeEEEEEecCCCcEEEEe
Confidence 322 334444333311 111222333333332 399999988765543 247777776544333444
Q ss_pred eecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECC-CCc--eeeeeCCCCceEEeeccCcccceEE
Q psy4818 346 LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-TGK--RLHSFPLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~-~g~--~~~~l~~~~g~v~~~~~~~d~~~l~ 412 (734)
++.+. ..-+..+.+.+-.-|+++.+.+. .|.+|.-. ++. ..+.|.....++-++.+++.|.++.
T Consensus 145 VL~~H-tqDVK~V~WHPt~dlL~S~SYDn--TIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~ 211 (312)
T KOG0645|consen 145 VLQEH-TQDVKHVIWHPTEDLLFSCSYDN--TIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLV 211 (312)
T ss_pred eeccc-cccccEEEEcCCcceeEEeccCC--eEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEE
Confidence 44433 23334444544357888888774 44444433 333 3456666666777788888776664
No 282
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.66 E-value=0.0033 Score=63.57 Aligned_cols=213 Identities=17% Similarity=0.169 Sum_probs=108.8
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
...++|.|||++.+.--. ....+-|+|++.++.+.+. ..+|. .-+-|.++ +++-...|.
T Consensus 98 ~~~~ls~dgk~~~V~N~T---Pa~SVtVVDl~~~kvv~ei~~PGC~-~iyP~~~~--~F~~lC~DG-------------- 157 (342)
T PF06433_consen 98 NMFALSADGKFLYVQNFT---PATSVTVVDLAAKKVVGEIDTPGCW-LIYPSGNR--GFSMLCGDG-------------- 157 (342)
T ss_dssp GGEEE-TTSSEEEEEEES---SSEEEEEEETTTTEEEEEEEGTSEE-EEEEEETT--EEEEEETTS--------------
T ss_pred cceEEccCCcEEEEEccC---CCCeEEEEECCCCceeeeecCCCEE-EEEecCCC--ceEEEecCC--------------
Confidence 458999999998765432 2368999999999876532 44452 22334333 232222111
Q ss_pred CcEEEEEECCCCCCCC---eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 224 GQKIYYHVLGTEQDKD---IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~---~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+..+.++...... ..+|...+++ .+..+.++.++.+++|.+.. ..||-+|+.+ ....+ ..+|..+.
T Consensus 158 --sl~~v~Ld~~Gk~~~~~t~~F~~~~dp-~f~~~~~~~~~~~~~F~Sy~----G~v~~~dlsg-~~~~~--~~~~~~~t 227 (342)
T PF06433_consen 158 --SLLTVTLDADGKEAQKSTKVFDPDDDP-LFEHPAYSRDGGRLYFVSYE----GNVYSADLSG-DSAKF--GKPWSLLT 227 (342)
T ss_dssp --CEEEEEETSTSSEEEEEEEESSTTTS--B-S--EEETTTTEEEEEBTT----SEEEEEEETT-SSEEE--EEEEESS-
T ss_pred --ceEEEEECCCCCEeEeeccccCCCCcc-cccccceECCCCeEEEEecC----CEEEEEeccC-Ccccc--cCcccccC
Confidence 23444444221111 1234333333 55567888877777776543 5899999887 22221 11222222
Q ss_pred c-cccceEE-----E--EEecCCeEEEEeCCC------CCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCE-
Q psy4818 301 P-GMDHHHE-----I--IANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNK- 365 (734)
Q Consensus 301 ~-~~~~~~~-----~--~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~- 365 (734)
. +...+|. . +.+..++||++.... .+...|+.+|+++++. ..-++-. ..+.++..+.++.
T Consensus 228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~kr---v~Ri~l~--~~~~Si~Vsqd~~P 302 (342)
T PF06433_consen 228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKR---VARIPLE--HPIDSIAVSQDDKP 302 (342)
T ss_dssp HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEE---EEEEEEE--EEESEEEEESSSS-
T ss_pred ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeE---EEEEeCC--CccceEEEccCCCc
Confidence 1 1122333 2 556677888886532 2234799999988752 2222211 1222444444333
Q ss_pred EEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 366 LIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
+++.... +...|+++|..+|+.++.+.
T Consensus 303 ~L~~~~~-~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 303 LLYALSA-GDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEET-TTTEEEEEETTT--EEEEE-
T ss_pred EEEEEcC-CCCeEEEEeCcCCcEEeehh
Confidence 4444433 34689999999999877775
No 283
>KOG0643|consensus
Probab=97.65 E-value=0.013 Score=56.12 Aligned_cols=230 Identities=13% Similarity=0.168 Sum_probs=127.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEc----CCcEEEEEEEecCCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTH----DHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSp----Dg~~l~y~~~~~~~~~~~~~ 217 (734)
-.+..+.+.-||. |.|+.... ...-||=.-.|+.+-.-.+. .+..|+- |.+.+.-.+.|
T Consensus 11 RplTqiKyN~eGD-LlFscaKD----~~~~vw~s~nGerlGty~GH---tGavW~~Did~~s~~liTGSAD--------- 73 (327)
T KOG0643|consen 11 RPLTQIKYNREGD-LLFSCAKD----STPTVWYSLNGERLGTYDGH---TGAVWCCDIDWDSKHLITGSAD--------- 73 (327)
T ss_pred cccceEEecCCCc-EEEEecCC----CCceEEEecCCceeeeecCC---CceEEEEEecCCcceeeecccc---------
Confidence 4466778888888 45666433 23444444456655322222 3445543 44555444432
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC-CceEEEEeCCCCCCCcccCCCCc
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ-GSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
+.+.+|++.+++ . +...+- +.-+..+.||++|.++++.....-. ...|.++|+.. ....+..+.|.
T Consensus 74 -------~t~kLWDv~tGk--~--la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~-~~~~~~s~ep~ 140 (327)
T KOG0643|consen 74 -------QTAKLWDVETGK--Q--LATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRD-DSSDIDSEEPY 140 (327)
T ss_pred -------ceeEEEEcCCCc--E--EEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccC-ChhhhcccCce
Confidence 367788888875 2 232221 2245578999999999987654333 27888898875 22233334445
Q ss_pred eeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--CCceeEEEEEeeCCEEEEEEEeC
Q psy4818 297 KTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED--ENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 297 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
.++......... .|+|-++.|+.- . .++.|-.+|+.++. .++... ....+..+.+..+...++..+.+
T Consensus 141 ~kI~t~~skit~a~Wg~l~~~ii~G-h---e~G~is~~da~~g~-----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~D 211 (327)
T KOG0643|consen 141 LKIPTPDSKITSALWGPLGETIIAG-H---EDGSISIYDARTGK-----ELVDSDEEHSSKINDLQFSRDRTYFITGSKD 211 (327)
T ss_pred EEecCCccceeeeeecccCCEEEEe-c---CCCcEEEEEcccCc-----eeeechhhhccccccccccCCcceEEecccC
Confidence 555443333333 499998877642 2 24569999998764 223222 12345666666657777777777
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEE
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFY 413 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~ 413 (734)
. .-.++|..+-+.++..... .-+...+.+|-.+.+++
T Consensus 212 t--takl~D~~tl~v~Kty~te-~PvN~aaisP~~d~Vil 248 (327)
T KOG0643|consen 212 T--TAKLVDVRTLEVLKTYTTE-RPVNTAAISPLLDHVIL 248 (327)
T ss_pred c--cceeeeccceeeEEEeeec-ccccceecccccceEEe
Confidence 4 4455666555554444322 12233344454444443
No 284
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.65 E-value=0.033 Score=67.18 Aligned_cols=211 Identities=13% Similarity=0.106 Sum_probs=110.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc---------c-------c-ccCeeEEEcCCcEEEEEE
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK---------N-------V-KFPSISWTHDHKGFFYNQ 206 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~---------~-------~-~~~~~~wSpDg~~l~y~~ 206 (734)
-.+++++++|..|.+ .+..+ ..|+++|+.++........ + . ....++++|++..||.+.
T Consensus 626 P~GIavd~~gn~LYV-aDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLLYV-ADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEEEE-EeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 357899999987654 44332 4789999887754221100 0 0 124689999776676554
Q ss_pred EecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCC-------------CCeeEEEEEEecCCcEEEEEEecCCC
Q psy4818 207 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN-------------GRSLGLHSEVTDCGRYLLVSTSNNTQ 273 (734)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~-------------~~~~~~~~~~SpDG~~l~~~~~~~~~ 273 (734)
.. ..+|++++..++.. .++.... .-..-.+++++|||++|++... .
T Consensus 702 ~~---------------~~~I~v~d~~~g~v---~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---~ 760 (1057)
T PLN02919 702 AG---------------QHQIWEYNISDGVT---RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---E 760 (1057)
T ss_pred CC---------------CCeEEEEECCCCeE---EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC---C
Confidence 21 33677777654321 1111100 0001236889999999887542 3
Q ss_pred CceEEEEeCCCCCCCcccCCCCc--eee--ecc---------ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 274 GSDLHYFDLHSLPDGKISGKFPL--KTV--IPG---------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 274 ~~~i~~~d~~~~~~~~l~~~~~~--~~l--~~~---------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
.+.|+++|++++....+....+. ..+ ... ...-.. .++++|+ +|+. + ..+++|.++|.+++.
T Consensus 761 n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVA-D--s~N~rIrviD~~tg~ 836 (1057)
T PLN02919 761 SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVA-D--SYNHKIKKLDPATKR 836 (1057)
T ss_pred CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEE-E--CCCCEEEEEECCCCe
Confidence 36899999886321101000000 000 000 000011 2778876 5543 3 235679999987654
Q ss_pred CCCceEeecCCC------------CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 340 EKNWKTLIPEDE------------NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 340 ~~~~~~l~~~~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
+..+..... .....++.+..++++|++-.. ...|.++|+.+++.
T Consensus 837 ---v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~--Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 837 ---VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTN--NSLIRYLDLNKGEA 892 (1057)
T ss_pred ---EEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECC--CCEEEEEECCCCcc
Confidence 233322110 012234444444677665433 36899999977764
No 285
>KOG0294|consensus
Probab=97.64 E-value=0.012 Score=57.60 Aligned_cols=234 Identities=16% Similarity=0.162 Sum_probs=124.7
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCc--EEEEEEEecCCCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHK--GFFYNQYCDINGTADGT 217 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~--~l~y~~~~~~~~~~~~~ 217 (734)
..++..+++| |.++| +|+..-+|+++|+.....+...... .....+.|.++-. .|+-.+.|.
T Consensus 43 ~~sitavAVs--~~~~a-----SGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG-------- 107 (362)
T KOG0294|consen 43 AGSITALAVS--GPYVA-----SGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDG-------- 107 (362)
T ss_pred ccceeEEEec--ceeEe-----ccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCC--------
Confidence 3456666665 88777 4444568999999876654332222 1235666777654 455444322
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|..|+.+.- .++-....+.+-+.+++..|.||. |++... ...+.+|++-.|....+ .
T Consensus 108 --------~i~iw~~~~W----~~~~slK~H~~~Vt~lsiHPS~KL-ALsVg~---D~~lr~WNLV~Gr~a~v------~ 165 (362)
T KOG0294|consen 108 --------HIIIWRVGSW----ELLKSLKAHKGQVTDLSIHPSGKL-ALSVGG---DQVLRTWNLVRGRVAFV------L 165 (362)
T ss_pred --------cEEEEEcCCe----EEeeeecccccccceeEecCCCce-EEEEcC---CceeeeehhhcCcccee------e
Confidence 5667766542 123222333344667899999985 444432 25788999887543211 1
Q ss_pred eeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 298 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 298 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
+| .. ....-.|+|.|+++++...+ +|-.+.+++..- +.++.-+ ...+ .+.+.+++.+++ ..++ ..
T Consensus 166 ~L-~~-~at~v~w~~~Gd~F~v~~~~-----~i~i~q~d~A~v--~~~i~~~--~r~l-~~~~l~~~~L~v-G~d~--~~ 230 (362)
T KOG0294|consen 166 NL-KN-KATLVSWSPQGDHFVVSGRN-----KIDIYQLDNASV--FREIENP--KRIL-CATFLDGSELLV-GGDN--EW 230 (362)
T ss_pred cc-CC-cceeeEEcCCCCEEEEEecc-----EEEEEecccHhH--hhhhhcc--ccce-eeeecCCceEEE-ecCC--ce
Confidence 11 11 11112399999999886543 244444433220 1222211 1122 233344344444 3333 46
Q ss_pred EEEEECCCCceeeeeCCCCceEEeec-cCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHIS-GRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~-~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+|-.++..+..+......|-++. ......+++++.+|.. .+.+||+
T Consensus 231 i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG---~I~vWd~ 280 (362)
T KOG0294|consen 231 ISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDG---FIKVWDI 280 (362)
T ss_pred EEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCc---eEEEEEc
Confidence 77888866666556655544443333 2222346777777754 5666666
No 286
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.64 E-value=0.0058 Score=61.09 Aligned_cols=171 Identities=19% Similarity=0.175 Sum_probs=94.3
Q ss_pred eCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCC--ce--EEEEEEECCCCCcccccccccccCeeEEE
Q psy4818 121 RNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS--DW--NTLHIKDVDTGKDYPEVLKNVKFPSISWT 196 (734)
Q Consensus 121 ~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~--~~--~~l~v~dl~~g~~~~~~~~~~~~~~~~wS 196 (734)
+..++..+++.+... ............+.|||+ |.|+...... .. ..||.++.. ++.......-....+++||
T Consensus 66 d~~~g~~~~~~~~~~-~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s 142 (246)
T PF08450_consen 66 DPDTGKVTVLADLPD-GGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFS 142 (246)
T ss_dssp ETTTTEEEEEEEEET-TCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEE
T ss_pred ecCCCcEEEEeeccC-CCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEEC
Confidence 555666677766521 111346678899999999 5555443211 11 679999988 5532211111123689999
Q ss_pred cCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC--C-CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC
Q psy4818 197 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD--K-DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ 273 (734)
Q Consensus 197 pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~--~-~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 273 (734)
||++.||++.. ...+|++.+++.... . ...+.+.+.......++++..+|+ |++... .
T Consensus 143 ~dg~~lyv~ds---------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~---~ 203 (246)
T PF08450_consen 143 PDGKTLYVADS---------------FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW---G 203 (246)
T ss_dssp TTSSEEEEEET---------------TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE---T
T ss_pred Ccchheeeccc---------------ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc---C
Confidence 99998887653 234799998864432 1 122333333333566889999997 343332 2
Q ss_pred CceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEE-ecCCeEEEEeC
Q psy4818 274 GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIA-NNGPELIVKTT 322 (734)
Q Consensus 274 ~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~ 322 (734)
...|++++.++ . ....+......... .|. ++.+.||+++.
T Consensus 204 ~~~I~~~~p~G-~--------~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 204 GGRIVVFDPDG-K--------LLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp TTEEEEEETTS-C--------EEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred CCEEEEECCCc-c--------EEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 36899999875 2 11112111112222 253 67778888764
No 287
>KOG0289|consensus
Probab=97.64 E-value=0.0091 Score=60.84 Aligned_cols=184 Identities=12% Similarity=0.201 Sum_probs=109.7
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.+.+.+..|.|.|+..++++ ..+-..|.++|..+... ...+.+.+.++.||| +.|...-
T Consensus 305 ~V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg--Lifgtgt----------- 366 (506)
T KOG0289|consen 305 PVTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG--LIFGTGT----------- 366 (506)
T ss_pred cceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc--eEEeccC-----------
Confidence 36788999999999877653 35667788888864422 233446789999998 4444321
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
....|.+|++..+. .+.-| +.+.+-+..++||.+|-||+....+ ..|.+||+.... .+..+
T Consensus 367 ---~d~~vkiwdlks~~--~~a~F--pght~~vk~i~FsENGY~Lat~add----~~V~lwDLRKl~--------n~kt~ 427 (506)
T KOG0289|consen 367 ---PDGVVKIWDLKSQT--NVAKF--PGHTGPVKAISFSENGYWLATAADD----GSVKLWDLRKLK--------NFKTI 427 (506)
T ss_pred ---CCceEEEEEcCCcc--ccccC--CCCCCceeEEEeccCceEEEEEecC----CeEEEEEehhhc--------cccee
Confidence 12368888887654 22222 3344456789999999999976543 349999997621 22222
Q ss_pred e-ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc-eeEEEEEeeCCEEEEEE
Q psy4818 300 I-PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR-TLDVVAAVANNKLIVHY 370 (734)
Q Consensus 300 ~-~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~l~~~~ 370 (734)
. ........+ |...|..+.+. +..-+||.++-.+.. |+.+..-.+.. ....+.+.....+++..
T Consensus 428 ~l~~~~~v~s~~fD~SGt~L~~~----g~~l~Vy~~~k~~k~---W~~~~~~~~~sg~st~v~Fg~~aq~l~s~ 494 (506)
T KOG0289|consen 428 QLDEKKEVNSLSFDQSGTYLGIA----GSDLQVYICKKKTKS---WTEIKELADHSGLSTGVRFGEHAQYLAST 494 (506)
T ss_pred eccccccceeEEEcCCCCeEEee----cceeEEEEEeccccc---ceeeehhhhcccccceeeecccceEEeec
Confidence 2 122222222 77777777654 334567877755544 87665443222 23344444423344443
No 288
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.63 E-value=0.00019 Score=71.81 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=64.1
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.|+++||+++....+............. |.++.+|.||.|... . . ..........+..+.+.- ..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~----~---~---~~~~~~~~~~~~~~~~~~--~~ 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD----P---A---GYSLSAYADDLAALLDAL--GL 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC----c---c---cccHHHHHHHHHHHHHHh--CC
Confidence 458999999987665443311111112222 999999999855432 0 0 111122233333333332 22
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.++.++|+|+||.++..++.++|+.++.+|+..+.
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 23999999999999999999999988988887754
No 289
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.62 E-value=0.0098 Score=61.91 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=133.8
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc---cccccccCeeEEEcC--CcEEEEEEEecCCCCCCCCccc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHD--HKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~---~~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.+.||-|.+++|..+. ..|++.++ |+..-+. .+....+..+.|||- +..|+|..-..
T Consensus 136 ~~k~s~~D~y~ARvv~------~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk----------- 197 (561)
T COG5354 136 VLKFSIDDKYVARVVG------SSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEK----------- 197 (561)
T ss_pred eeeeeecchhhhhhcc------CeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEcccc-----------
Confidence 5789999999998853 35888887 4432111 111123468899996 45677765321
Q ss_pred ccCCcEEEEEECCCCCCC-CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-----CC--ceEEEEeCCCCCCCcccC
Q psy4818 221 AHMGQKIYYHVLGTEQDK-DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-----QG--SDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~-~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-----~~--~~i~~~d~~~~~~~~l~~ 292 (734)
.+.+.++.++.+...... ...+|... ...+.|.+.|++|++...... .. +.||++++...
T Consensus 198 ~~kpa~~~i~sIp~~s~l~tk~lfk~~-----~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~------- 265 (561)
T COG5354 198 LNKPAMVRILSIPKNSVLVTKNLFKVS-----GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER------- 265 (561)
T ss_pred CCCCcEEEEEEccCCCeeeeeeeEeec-----ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc-------
Confidence 345566777776633211 11123221 246899999999998765433 12 78999998751
Q ss_pred CCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEE
Q psy4818 293 KFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 293 ~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 371 (734)
..+....-.+..+.+ |+|+++++.+++.-. ...+..+|+.+. +.-.+++.....+ ++.+.++++++..-
T Consensus 266 --~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~N----l~~~~Pe~~rNT~--~fsp~~r~il~agF 335 (561)
T COG5354 266 --SIPVEKDLKDPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRGN----LRFYFPEQKRNTI--FFSPHERYILFAGF 335 (561)
T ss_pred --ccceeccccccceeeeecccCCceeEEeccc--ccceeecccccc----eEEecCCcccccc--cccCcccEEEEecC
Confidence 122221112334445 999999999887432 234677777653 3556666544332 22334466676666
Q ss_pred eCCceeEEEEECCCCce--eeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 372 QNVRSVMDLHDLNTGKR--LHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~~--~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
.+-...+.+|+.. |+- ...+.....++ ..++||+..+...+.|.
T Consensus 336 ~nl~gni~i~~~~-~rf~~~~~~~~~n~s~--~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 336 DNLQGNIEIFDPA-GRFKVAGAFNGLNTSY--CDWSPDGQFYDTDTTSE 381 (561)
T ss_pred CccccceEEeccC-CceEEEEEeecCCceE--eeccCCceEEEecCCCc
Confidence 6666788899884 442 11232222222 35778876665555544
No 290
>KOG0278|consensus
Probab=97.61 E-value=0.0019 Score=60.85 Aligned_cols=194 Identities=15% Similarity=0.170 Sum_probs=115.0
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc--ccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~--~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.-+...+||.|.++|. .|+...-|+|+|+..-+.-+....+. .+..+.|....+.|+-.+.+.
T Consensus 101 hivk~~af~~ds~~ll-----tgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~---------- 165 (334)
T KOG0278|consen 101 HIVKAVAFSQDSNYLL-----TGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK---------- 165 (334)
T ss_pred heeeeEEecccchhhh-----ccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC----------
Confidence 3467889999999887 33334578899987655322222111 224678988888887765432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|++|+..++..-..+-+.. ...++..|+||++|.+.- .+.|..||..+.. .|+. ...+.
T Consensus 166 ------tVRLWD~rTgt~v~sL~~~s-----~VtSlEvs~dG~ilTia~-----gssV~Fwdaksf~--~lKs-~k~P~- 225 (334)
T KOG0278|consen 166 ------TVRLWDHRTGTEVQSLEFNS-----PVTSLEVSQDGRILTIAY-----GSSVKFWDAKSFG--LLKS-YKMPC- 225 (334)
T ss_pred ------ceEEEEeccCcEEEEEecCC-----CCcceeeccCCCEEEEec-----CceeEEecccccc--ceee-ccCcc-
Confidence 57888888775333222221 235689999999988642 2567888887721 1100 00000
Q ss_pred eccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee-cCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 300 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI-PEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 300 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
.......+|+. .+|+..+ ..+.+|++|..+++. .... .+. ...+-.+.+..++-+|.+.+++|.-+|
T Consensus 226 ----nV~SASL~P~k-~~fVaGg---ed~~~~kfDy~TgeE---i~~~nkgh-~gpVhcVrFSPdGE~yAsGSEDGTirl 293 (334)
T KOG0278|consen 226 ----NVESASLHPKK-EFFVAGG---EDFKVYKFDYNTGEE---IGSYNKGH-FGPVHCVRFSPDGELYASGSEDGTIRL 293 (334)
T ss_pred ----ccccccccCCC-ceEEecC---cceEEEEEeccCCce---eeecccCC-CCceEEEEECCCCceeeccCCCceEEE
Confidence 00111266765 5665444 467899999998762 2222 232 344555666666889999988875444
Q ss_pred EEEE
Q psy4818 379 DLHD 382 (734)
Q Consensus 379 ~~~d 382 (734)
+...
T Consensus 294 WQt~ 297 (334)
T KOG0278|consen 294 WQTT 297 (334)
T ss_pred EEec
Confidence 4443
No 291
>KOG2048|consensus
Probab=97.61 E-value=0.06 Score=58.17 Aligned_cols=236 Identities=12% Similarity=0.139 Sum_probs=136.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc---cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~---~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
+.++++|.+.+.||.+... ..|-+|++..+=.+...+ .+....+++|+ +|.+|+-+....
T Consensus 28 I~slA~s~kS~~lAvsRt~-----g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg----------- 90 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTD-----GNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSG----------- 90 (691)
T ss_pred eEEEEEeccCCceeeeccC-----CcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCc-----------
Confidence 6789999999999976542 358888888764332222 22234789998 455777665432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|..|++-+... +...+. ..+-+.+++.+|.+..+++...+ ..++.++...+ .+ .....+
T Consensus 91 -----~i~EwDl~~lk~--~~~~d~--~gg~IWsiai~p~~~~l~Igcdd----Gvl~~~s~~p~---~I----~~~r~l 150 (691)
T KOG2048|consen 91 -----SITEWDLHTLKQ--KYNIDS--NGGAIWSIAINPENTILAIGCDD----GVLYDFSIGPD---KI----TYKRSL 150 (691)
T ss_pred -----eEEEEecccCce--eEEecC--CCcceeEEEeCCccceEEeecCC----ceEEEEecCCc---eE----EEEeec
Confidence 677788776542 222222 23356678899999988875332 35666665541 12 122222
Q ss_pred ccccc-eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-----C-CCceeEEEEEeeCCEEEEEEEe
Q psy4818 301 PGMDH-HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-----D-ENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 301 ~~~~~-~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~-~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
..... .... |.+++.+|+--+ .++.|-.+|+.++.. ...++.+ . +...+-++.+.. +..+++.
T Consensus 151 ~rq~sRvLslsw~~~~~~i~~Gs----~Dg~Iriwd~~~~~t--~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sg-- 221 (691)
T KOG2048|consen 151 MRQKSRVLSLSWNPTGTKIAGGS----IDGVIRIWDVKSGQT--LHIITMQLDRLSKREPTIVWSVLFLR-DSTIASG-- 221 (691)
T ss_pred ccccceEEEEEecCCccEEEecc----cCceEEEEEcCCCce--EEEeeecccccccCCceEEEEEEEee-cCcEEEe--
Confidence 21112 2233 888887777433 245688889876541 1111111 1 112222233333 2334443
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|....+..||...|..++.+....+.|.++..++++++++.+. ..| .++.|..
T Consensus 222 DS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaG---vd~-~ii~~~~ 274 (691)
T KOG2048|consen 222 DSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAG---VDP-KIIQYSL 274 (691)
T ss_pred cCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEcc---CCC-ceEEEEe
Confidence 3345899999988887666665566777788887777776433 333 4667776
No 292
>KOG0307|consensus
Probab=97.60 E-value=0.00049 Score=77.97 Aligned_cols=251 Identities=13% Similarity=0.089 Sum_probs=140.7
Q ss_pred eeEEeCCCCc-EEEEEEe-------CCCCceEEEEEEECCCCCc----ccccccccccCeeEEEcCCcE---EEEEEEec
Q psy4818 145 KLYAFSDNGK-HFAYCLS-------KSGSDWNTLHIKDVDTGKD----YPEVLKNVKFPSISWTHDHKG---FFYNQYCD 209 (734)
Q Consensus 145 ~~~~~SPDG~-~la~~~~-------~~g~~~~~l~v~dl~~g~~----~~~~~~~~~~~~~~wSpDg~~---l~y~~~~~ 209 (734)
..++|||++. +||-... .+-+-.-+|+..|..+.+. +.......+|..++|++-|+. |.....+
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~e- 88 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLE- 88 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeecccc-
Confidence 3589999996 3432211 1112224677777766552 211223446788999998876 3333321
Q ss_pred CCCCCCCCcccccCCcEEEEEECCC--CCCCCeeEEecCCCCeeEEEEEEecCCc-EEEEEEecCCCCceEEEEeCCCCC
Q psy4818 210 INGTADGTETTAHMGQKIYYHVLGT--EQDKDIPVVEFPNGRSLGLHSEVTDCGR-YLLVSTSNNTQGSDLHYFDLHSLP 286 (734)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~l~t--~~~~~~~v~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~i~~~d~~~~~ 286 (734)
...|-+++... ...+..++.+...+.+-+.++.|++.+. .|+ ++.+..+|++||+.. .
T Consensus 89 --------------dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLA----SGa~~geI~iWDlnn-~ 149 (1049)
T KOG0307|consen 89 --------------DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLA----SGADDGEILIWDLNK-P 149 (1049)
T ss_pred --------------CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceee----ccCCCCcEEEeccCC-c
Confidence 11455555443 1111122333334455677899999987 555 445558999999987 3
Q ss_pred CCcccCCCCceeeeccccceEEE--EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC-
Q psy4818 287 DGKISGKFPLKTVIPGMDHHHEI--IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN- 363 (734)
Q Consensus 287 ~~~l~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 363 (734)
....+. ........... |...-++|+-.. ..+++...||+...+ .+..+.....+.....+.|..+
T Consensus 150 ~tP~~~------~~~~~~~eI~~lsWNrkvqhILAS~---s~sg~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~ 218 (1049)
T KOG0307|consen 150 ETPFTP------GSQAPPSEIKCLSWNRKVSHILASG---SPSGRAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDH 218 (1049)
T ss_pred CCCCCC------CCCCCcccceEeccchhhhHHhhcc---CCCCCceeccccCCC--cccccccCCCccceeeeeeCCCC
Confidence 222111 11111112222 433333444222 335578899997653 2344443333333455555443
Q ss_pred -CEEEEEEEeCCceeEEEEECCCC-ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 364 -NKLIVHYIQNVRSVMDLHDLNTG-KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 -~~l~~~~~~~~~~~l~~~dl~~g-~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++++...++..+.|.+||+..- ..++.++.+...|.++++.+.+.++++++.-.. +++.++.
T Consensus 219 aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~---~ii~wN~ 283 (1049)
T KOG0307|consen 219 ATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDN---RIICWNP 283 (1049)
T ss_pred ceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCC---CeeEecC
Confidence 36777777888889999998433 234566656444558999988878887654443 6788887
No 293
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.59 E-value=0.0025 Score=64.12 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=70.9
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHh---cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHH-HHHHHH--
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRH---FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMIN-- 561 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~-- 561 (734)
.++||++-|-||... |-..++..|.+ ..+.|++..+.|....... ..........+++|.+.- ++++.+
T Consensus 2 ~~li~~IPGNPGlv~---fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~--~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE---FYEEFLSALYEKLNPQFEILGISHAGHSTSPSN--SKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHH---HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc--ccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 468899998887642 32334444432 3799999999885433221 000012344566776654 333322
Q ss_pred -cCCCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCCcc
Q psy4818 562 -KKYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGAL 603 (734)
Q Consensus 562 -~~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~ 603 (734)
+......++.++|||.|+|+++.++.+.+ ..++.++...|.+
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 21114568999999999999999999998 5678888888854
No 294
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.59 E-value=0.0047 Score=64.09 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=103.9
Q ss_pred HHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc-CCcchhccccc---cccCccccc---cc---CCC---C
Q psy4818 559 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL-VGALDMLRFNK---FTIAYYSES---EF---GSP---N 625 (734)
Q Consensus 559 l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~---~~~~~~~~~---~~---g~~---~ 625 (734)
+.+....+.++.+|.|.|==|..+-.+++-. .+++|++.. .+++++...+. ...|..|.. .| |.. .
T Consensus 163 ~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~ 241 (367)
T PF10142_consen 163 LKKKFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLD 241 (367)
T ss_pred HHhhcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcC
Confidence 3333456788999999999999998888744 466776644 34444432211 112211211 11 221 3
Q ss_pred CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC
Q psy4818 626 NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT 705 (734)
Q Consensus 626 ~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 705 (734)
.++..+.+.-.+|+...++ ...| -||+.|.+|+...+..+.-++..|. | +..+++.|+++|+...
T Consensus 242 tp~f~~L~~ivDP~~Y~~r----L~~P-K~ii~atgDeFf~pD~~~~y~d~L~---------G-~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 242 TPEFDKLMQIVDPYSYRDR----LTMP-KYIINATGDEFFVPDSSNFYYDKLP---------G-EKYLRYVPNAGHSLIG 306 (367)
T ss_pred CHHHHHHHHhcCHHHHHHh----cCcc-EEEEecCCCceeccCchHHHHhhCC---------C-CeeEEeCCCCCcccch
Confidence 3444455566789988765 6777 8999999999999999999999885 3 4578999999999875
Q ss_pred chHHhHHHHHHHHHHHHHHcCCCCCCC
Q psy4818 706 PLMKSIEEMTDIYVFLMKSLGLKYYPD 732 (734)
Q Consensus 706 ~~~~~~~~~~~~~~fl~~~l~~~~~~~ 732 (734)
.+....+.+|+...+.....|.
T Consensus 307 -----~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 307 -----SDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred -----HHHHHHHHHHHHHHHcCCCCCe
Confidence 2344557899998887766663
No 295
>KOG0771|consensus
Probab=97.58 E-value=0.0029 Score=64.17 Aligned_cols=191 Identities=12% Similarity=0.094 Sum_probs=100.2
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..+++++||+.||- |..+..++||+...-. .+.+......+..+.||||||.|+++..+
T Consensus 148 k~vaf~~~gs~lat-----gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d--------------- 207 (398)
T KOG0771|consen 148 KVVAFNGDGSKLAT-----GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD--------------- 207 (398)
T ss_pred eEEEEcCCCCEeee-----ccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC---------------
Confidence 46899999999994 4455789999954443 23333333344689999999999999854
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCC--cEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCG--RYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...+|+..++..-..+ +..+.+..+....|+-|+ ..+.+....... ..|..+++..-.... -.++.+.+.
T Consensus 208 --~~~VW~~~~g~~~a~~--t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~-~~v~~~~~~~w~~~~---~l~~~~~~~ 279 (398)
T KOG0771|consen 208 --SARVWSVNTGAALARK--TPFSKDEMFSSCRFSVDNAQETLRLAASQFPG-GGVRLCDISLWSGSN---FLRLRKKIK 279 (398)
T ss_pred --ceEEEEeccCchhhhc--CCcccchhhhhceecccCCCceEEEEEecCCC-CceeEEEeeeecccc---ccchhhhhh
Confidence 2445555554211101 001112234566777776 222222222111 233333333200000 122333344
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEE
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 370 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 370 (734)
..+..... +|.||+.+++-++. +.+..++..+-+ ...++++.....+..+.+..+.+.....
T Consensus 280 ~~~siSsl~VS~dGkf~AlGT~d----GsVai~~~~~lq---~~~~vk~aH~~~VT~ltF~Pdsr~~~sv 342 (398)
T KOG0771|consen 280 RFKSISSLAVSDDGKFLALGTMD----GSVAIYDAKSLQ---RLQYVKEAHLGFVTGLTFSPDSRYLASV 342 (398)
T ss_pred ccCcceeEEEcCCCcEEEEeccC----CcEEEEEeceee---eeEeehhhheeeeeeEEEcCCcCccccc
Confidence 34333333 89999988877763 347777765543 2345555444455555554434444443
No 296
>KOG1009|consensus
Probab=97.56 E-value=0.0095 Score=60.22 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=81.2
Q ss_pred cCCCCeeEEEEEeCC---CCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC--------C
Q psy4818 109 KGLQNHSILYVQRNL---TGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--------T 177 (734)
Q Consensus 109 ~~~~~~~~l~~~~~~---~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~--------~ 177 (734)
.+++.+-.+|..... ++...+.+ ...|+ .+...+..+.|||+|..||= |.+...+.+|-.. +
T Consensus 32 ~G~D~~iriW~v~r~~~~~~~~~V~y-~s~Ls-~H~~aVN~vRf~p~gelLAS-----g~D~g~v~lWk~~~~~~~~~d~ 104 (434)
T KOG1009|consen 32 AGGDKDIRIWKVNRSEPGGGDMKVEY-LSSLS-RHTRAVNVVRFSPDGELLAS-----GGDGGEVFLWKQGDVRIFDADT 104 (434)
T ss_pred ccCccceeeeeeeecCCCCCceeEEE-eeccc-CCcceeEEEEEcCCcCeeee-----cCCCceEEEEEecCcCCccccc
Confidence 345566677775432 22222222 22332 34567889999999999993 3333456666543 2
Q ss_pred -----CC-c-cccc--ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC
Q psy4818 178 -----GK-D-YPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 248 (734)
Q Consensus 178 -----g~-~-~~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~ 248 (734)
.+ . +... ........++|+||+..+.+.+.+. .++.+++..++.. .+ ..++
T Consensus 105 e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn----------------s~~l~Dv~~G~l~--~~--~~dh 164 (434)
T KOG1009|consen 105 EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN----------------SVRLWDVHAGQLL--AI--LDDH 164 (434)
T ss_pred hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc----------------eEEEEEeccceeE--ee--cccc
Confidence 11 0 0001 1112346789999999998888654 6888888877532 22 2344
Q ss_pred CeeEEEEEEecCCcEEEEEEe
Q psy4818 249 RSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 249 ~~~~~~~~~SpDG~~l~~~~~ 269 (734)
..+..+++|.|-+++++-.+.
T Consensus 165 ~~yvqgvawDpl~qyv~s~s~ 185 (434)
T KOG1009|consen 165 EHYVQGVAWDPLNQYVASKSS 185 (434)
T ss_pred ccccceeecchhhhhhhhhcc
Confidence 557788999999999885543
No 297
>COG3150 Predicted esterase [General function prediction only]
Probab=97.55 E-value=0.0012 Score=58.68 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc--cc--ccccCCCC
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY--YS--ESEFGSPN 625 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~--~~--~~~~g~~~ 625 (734)
...++-++-++++. .|+ .++|+|-|.|||.+-+++.++- +++++ ..|.+-..+.+..-++. .| -.+|-.
T Consensus 43 ~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~G--irav~-~NPav~P~e~l~gylg~~en~ytg~~y~l-- 115 (191)
T COG3150 43 QQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVL-- 115 (191)
T ss_pred HHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHhC--Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEe--
Confidence 34455555555542 333 3899999999999999998863 44544 44433222211111111 00 011100
Q ss_pred CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCC-CCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 626 NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH-DDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 626 ~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~-D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
.+.....+.. .+++. .+.|..|++.... |.+..+.++... ++.. ..++..|+.|.|.
T Consensus 116 e~~hI~~l~~----~~~~~----l~~p~~~~lL~qtgDEvLDyr~a~a~---y~~~-----------~~~V~dgg~H~F~ 173 (191)
T COG3150 116 ESRHIATLCV----LQFRE----LNRPRCLVLLSQTGDEVLDYRQAVAY---YHPC-----------YEIVWDGGDHKFK 173 (191)
T ss_pred ehhhHHHHHH----hhccc----cCCCcEEEeecccccHHHHHHHHHHH---hhhh-----------hheeecCCCcccc
Confidence 1111222211 12222 3344455555544 876666554433 3333 4567789999997
Q ss_pred CchHHhHHHHHHHHHHHH
Q psy4818 705 TPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 705 ~~~~~~~~~~~~~~~fl~ 722 (734)
.-. ....++.+|+.
T Consensus 174 ~f~----~~l~~i~aF~g 187 (191)
T COG3150 174 GFS----RHLQRIKAFKG 187 (191)
T ss_pred chH----HhHHHHHHHhc
Confidence 532 34556777753
No 298
>KOG2919|consensus
Probab=97.55 E-value=0.005 Score=60.35 Aligned_cols=200 Identities=14% Similarity=0.088 Sum_probs=98.6
Q ss_pred EEEEEECCCCCccc--------ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC-CCCCCC
Q psy4818 169 TLHIKDVDTGKDYP--------EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG-TEQDKD 239 (734)
Q Consensus 169 ~l~v~dl~~g~~~~--------~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-t~~~~~ 239 (734)
-|++||.-+|+..- +.... ..++.|||||..|+-.-. ..|.+.++. .+...+
T Consensus 134 PIh~wdaftG~lraSy~~ydh~de~ta--AhsL~Fs~DGeqlfaGyk-----------------rcirvFdt~RpGr~c~ 194 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRASYRAYDHQDEYTA--AHSLQFSPDGEQLFAGYK-----------------RCIRVFDTSRPGRDCP 194 (406)
T ss_pred ceeeeeccccccccchhhhhhHHhhhh--heeEEecCCCCeEeeccc-----------------ceEEEeeccCCCCCCc
Confidence 46777777776321 11121 257899999999875432 134444442 111111
Q ss_pred -e-eEEec-CCCCeeEEEEEEecCCc-EEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE-E-EEEec
Q psy4818 240 -I-PVVEF-PNGRSLGLHSEVTDCGR-YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-E-IIANN 313 (734)
Q Consensus 240 -~-~v~~~-~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~-~-~~s~d 313 (734)
. .++.. ....+.+..+++||-.. .+++-+.. ....||..+-. .++..+ .+...+. . .|-+|
T Consensus 195 vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~--q~~giy~~~~~----------~pl~ll-ggh~gGvThL~~~ed 261 (406)
T KOG2919|consen 195 VYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG--QRVGIYNDDGR----------RPLQLL-GGHGGGVTHLQWCED 261 (406)
T ss_pred chhhhhcccccccceeeeeeccCCCCcceeeeccc--ceeeeEecCCC----------Cceeee-cccCCCeeeEEeccC
Confidence 1 11111 11133566788999554 55543321 12345544322 233333 3444443 3 39999
Q ss_pred CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEE--EEeeCCEEEEEEEeCCceeEEEEECCC-Cceee
Q psy4818 314 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV--AAVANNKLIVHYIQNVRSVMDLHDLNT-GKRLH 390 (734)
Q Consensus 314 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~l~~~dl~~-g~~~~ 390 (734)
|.+|+.-+.. .-+|..||+..... .+-.|-.+.. ...+-+ .+...+.++++...+ ..|.+||+++ |.+..
T Consensus 262 Gn~lfsGaRk---~dkIl~WDiR~~~~-pv~~L~rhv~-~TNQRI~FDld~~~~~LasG~td--G~V~vwdlk~~gn~~s 334 (406)
T KOG2919|consen 262 GNKLFSGARK---DDKILCWDIRYSRD-PVYALERHVG-DTNQRILFDLDPKGEILASGDTD--GSVRVWDLKDLGNEVS 334 (406)
T ss_pred cCeecccccC---CCeEEEEeehhccc-hhhhhhhhcc-CccceEEEecCCCCceeeccCCC--ccEEEEecCCCCCccc
Confidence 9988753332 34699999865321 0111211211 111112 222235566555444 4788999976 66433
Q ss_pred eeCCCCceEEeeccCcc
Q psy4818 391 SFPLDLGQITHISGRRK 407 (734)
Q Consensus 391 ~l~~~~g~v~~~~~~~d 407 (734)
.+....-.+.+++.+|-
T Consensus 335 v~~~~sd~vNgvslnP~ 351 (406)
T KOG2919|consen 335 VTGNYSDTVNGVSLNPI 351 (406)
T ss_pred ccccccccccceecCcc
Confidence 33222444567777765
No 299
>KOG0292|consensus
Probab=97.50 E-value=0.026 Score=62.77 Aligned_cols=217 Identities=13% Similarity=0.179 Sum_probs=119.6
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccccc-CeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~-~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+.++.|.|++-..+ +|.+.+.|.||+.++.+++-...+..++ ....|.+.=-+|+-.++|
T Consensus 51 dGpVRgv~FH~~qplFV-----SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDD----------- 114 (1202)
T KOG0292|consen 51 DGPVRGVDFHPTQPLFV-----SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDD----------- 114 (1202)
T ss_pred CCccceeeecCCCCeEE-----ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCC-----------
Confidence 35688999999998644 4567799999999988765333333321 344555555566655543
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC------
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK------ 293 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~------ 293 (734)
+.|.+|+.-+.. -+.+.+ .+..+++...|.|....|+ ++ +-...|.+||+.+.......+.
T Consensus 115 -----QTIrIWNwqsr~--~iavlt--GHnHYVMcAqFhptEDlIV-Sa---SLDQTVRVWDisGLRkk~~~pg~~e~~~ 181 (1202)
T KOG0292|consen 115 -----QTIRIWNWQSRK--CIAVLT--GHNHYVMCAQFHPTEDLIV-SA---SLDQTVRVWDISGLRKKNKAPGSLEDQM 181 (1202)
T ss_pred -----CeEEEEeccCCc--eEEEEe--cCceEEEeeccCCccceEE-Ee---cccceEEEEeecchhccCCCCCCchhhh
Confidence 367888876653 223333 4566888999999777765 22 2226789999876433322211
Q ss_pred ------C------C--ceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEE
Q psy4818 294 ------F------P--LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 359 (734)
Q Consensus 294 ------~------~--~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 359 (734)
. + +..+..+.+.+....+-.+..=++++..+...-+|++++- +.. |..=+.-+....+..+.
T Consensus 182 ~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne-tKa---WEvDtcrgH~nnVssvl 257 (1202)
T KOG0292|consen 182 RGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE-TKA---WEVDTCRGHYNNVSSVL 257 (1202)
T ss_pred hccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc-ccc---eeehhhhcccCCcceEE
Confidence 0 0 0011222222222111122222333433333456777764 333 65433333344555665
Q ss_pred EeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 360 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 360 ~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
+.....++++..++ ..+.+||+...+.++.+
T Consensus 258 fhp~q~lIlSnsED--ksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 258 FHPHQDLILSNSED--KSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred ecCccceeEecCCC--ccEEEEecccccceeee
Confidence 55435677777776 46888888544434443
No 300
>KOG1063|consensus
Probab=97.48 E-value=0.001 Score=71.27 Aligned_cols=125 Identities=7% Similarity=0.065 Sum_probs=80.6
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+.+-+...+.||+|+.||-+...+-.+...|++|+.++=..... ......+..++|||||++|+-++.|.
T Consensus 524 HGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR--------- 594 (764)
T KOG1063|consen 524 HGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR--------- 594 (764)
T ss_pred CceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCc---------
Confidence 45778999999999999987766666778899999876443331 22222346789999999999887543
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+-++............-..+.+...+.+..|+||+++++ +.+++ ..+.+|....
T Consensus 595 -------t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~Fa-TaSRD---K~VkVW~~~~ 649 (764)
T KOG1063|consen 595 -------TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFA-TASRD---KKVKVWEEPD 649 (764)
T ss_pred -------eEEeeeeecccchhhhhccccccceEEEEcccCcccceeE-EecCC---ceEEEEeccC
Confidence 2333333222111000001334556778899999999943 44442 5677776655
No 301
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.48 E-value=0.013 Score=64.18 Aligned_cols=154 Identities=15% Similarity=0.160 Sum_probs=84.4
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcE
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 226 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 226 (734)
.=++|||+.|.-. ......+.++|.++-+......-+.+.....++|||+++|.+..+.+. ...
T Consensus 198 ~PlpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~------------G~t 261 (635)
T PRK02888 198 IPLPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEE------------GVT 261 (635)
T ss_pred cccCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCccc------------Ccc
Confidence 4578999976321 234467889999987653322222234578999999999888764321 123
Q ss_pred EEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-ccccc
Q psy4818 227 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDH 305 (734)
Q Consensus 227 l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~-~~~~~ 305 (734)
+..++.++. ....+|.... .-.+.+||++..+. .+.|-++|..+.... .......+ .+...
T Consensus 262 l~em~a~e~--d~~vvfni~~------iea~vkdGK~~~V~------gn~V~VID~~t~~~~----~~~v~~yIPVGKsP 323 (635)
T PRK02888 262 LAEMMAAER--DWVVVFNIAR------IEEAVKAGKFKTIG------GSKVPVVDGRKAANA----GSALTRYVPVPKNP 323 (635)
T ss_pred eeeeccccC--ceEEEEchHH------HHHhhhCCCEEEEC------CCEEEEEECCccccC----CcceEEEEECCCCc
Confidence 443333221 1222332211 12567899987751 267889997761000 01122222 22222
Q ss_pred eEEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 306 HHEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 306 ~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
.--.+||||+++|... .. ...+-++|+++
T Consensus 324 HGV~vSPDGkylyVan-kl--S~tVSVIDv~k 352 (635)
T PRK02888 324 HGVNTSPDGKYFIANG-KL--SPTVTVIDVRK 352 (635)
T ss_pred cceEECCCCCEEEEeC-CC--CCcEEEEEChh
Confidence 2123899999888643 32 23477788865
No 302
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.47 E-value=0.00039 Score=55.16 Aligned_cols=77 Identities=18% Similarity=0.158 Sum_probs=51.2
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCc
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNC 548 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~ 548 (734)
|.+|....+.|++ .+..+|+++||....+. .|. .+++.|+++||.|+..|.||.|... +. ......
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~--ry~-~~a~~L~~~G~~V~~~D~rGhG~S~------g~-rg~~~~ 66 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSG--RYA-HLAEFLAEQGYAVFAYDHRGHGRSE------GK-RGHIDS 66 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHH--HHH-HHHHHHHhCCCEEEEECCCcCCCCC------Cc-ccccCC
Confidence 5677888888765 26889999999643322 333 3567788899999999999977543 11 112345
Q ss_pred hhHHHHHHHHH
Q psy4818 549 FDDFQAAAEYM 559 (734)
Q Consensus 549 ~~D~~~~~~~l 559 (734)
+++++.-+..+
T Consensus 67 ~~~~v~D~~~~ 77 (79)
T PF12146_consen 67 FDDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHHH
Confidence 66666655544
No 303
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.47 E-value=0.0055 Score=69.28 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=70.5
Q ss_pred cEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEE-EEEecCCCCCCCCcccccCCcEEEEEE
Q psy4818 154 KHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFY-NQYCDINGTADGTETTAHMGQKIYYHV 231 (734)
Q Consensus 154 ~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (734)
.+|||..+..| .|.+.|..++..... ........+|.|||||+.|+| ++... ..+...||+.+
T Consensus 319 tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~-----------~~g~s~vYv~~ 383 (912)
T TIGR02171 319 AKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEG-----------LPGKSSVYVRN 383 (912)
T ss_pred eeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecC-----------CCCCceEEEEe
Confidence 46999988654 799999988775443 333334468999999999999 55422 12345799999
Q ss_pred CCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC--------ceEEEEeCCCCC
Q psy4818 232 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG--------SDLHYFDLHSLP 286 (734)
Q Consensus 232 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~--------~~i~~~d~~~~~ 286 (734)
|.+....-+.+--+. . -+..-...+.|...++.+++...+ ..-|.+..+.|+
T Consensus 384 L~t~~~~~vkl~ve~--a-aiprwrv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gk 443 (912)
T TIGR02171 384 LNASGSGLVKLPVEN--A-AIPRWRVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGK 443 (912)
T ss_pred hhccCCCceEeeccc--c-cccceEecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCC
Confidence 998765433322111 1 111234567776555444332221 356777777643
No 304
>KOG4840|consensus
Probab=97.45 E-value=0.0051 Score=57.20 Aligned_cols=107 Identities=16% Similarity=0.184 Sum_probs=75.2
Q ss_pred cEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCC-CCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 489 PVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 489 P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
-.|||+ ||-+.... --|.......|.+.+|.++.+..|-+- |||.. .-..+.+|+..++++++..++..
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred EEEEEE-cccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCccc
Confidence 345555 55454432 123333456677889999999998754 36621 22356789999999988766543
Q ss_pred CCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcchhc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDML 606 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~ 606 (734)
.|+++|||-|.-=.+..+++. |....|+|+++|+.|-.
T Consensus 108 --~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 --DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred --ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 799999999999888888532 44678999999998864
No 305
>KOG0639|consensus
Probab=97.45 E-value=0.0055 Score=63.36 Aligned_cols=228 Identities=13% Similarity=0.121 Sum_probs=126.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc-cccc----ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEV----LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~-~~~~----~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+....++|||+.|.. |.+..+|-|||+++-.. +... ...+ ..++-|||.| ++|....+
T Consensus 468 iRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaC--yALa~spDak-vcFsccsd--------- 530 (705)
T KOG0639|consen 468 IRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPAC--YALAISPDAK-VCFSCCSD--------- 530 (705)
T ss_pred eeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhh--hhhhcCCccc-eeeeeccC---------
Confidence 788999999999884 55678999999987543 2211 1223 5788899997 56655422
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
..|.+|+|... ++|.+...+..-...+..|+||..|. .++-.+.|..||+.++. ++ .
T Consensus 531 ------GnI~vwDLhnq----~~VrqfqGhtDGascIdis~dGtklW----TGGlDntvRcWDlregr--ql------q- 587 (705)
T KOG0639|consen 531 ------GNIAVWDLHNQ----TLVRQFQGHTDGASCIDISKDGTKLW----TGGLDNTVRCWDLREGR--QL------Q- 587 (705)
T ss_pred ------CcEEEEEcccc----eeeecccCCCCCceeEEecCCCceee----cCCCccceeehhhhhhh--hh------h-
Confidence 15778888643 24444443443445788999999987 33334789999998732 11 1
Q ss_pred eeccccc-eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 299 VIPGMDH-HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 299 l~~~~~~-~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
..++.. .+.. ..|.++++++--. +..+.+....+++ +-.+...+..++ ++.+..-++.+++...+.
T Consensus 588 -qhdF~SQIfSLg~cP~~dWlavGMe----ns~vevlh~skp~----kyqlhlheScVL-SlKFa~cGkwfvStGkDn-- 655 (705)
T KOG0639|consen 588 -QHDFSSQIFSLGYCPTGDWLAVGME----NSNVEVLHTSKPE----KYQLHLHESCVL-SLKFAYCGKWFVSTGKDN-- 655 (705)
T ss_pred -hhhhhhhheecccCCCccceeeecc----cCcEEEEecCCcc----ceeecccccEEE-EEEecccCceeeecCchh--
Confidence 011111 1222 5688998886433 3346676665554 222333323444 343333255566655543
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEE
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 426 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~ 426 (734)
-|-.|...-|..+-+... ...|.+-..+.|+ +++++.|+.. -..+|.
T Consensus 656 lLnawrtPyGasiFqskE-~SsVlsCDIS~dd-kyIVTGSGdk-kATVYe 702 (705)
T KOG0639|consen 656 LLNAWRTPYGASIFQSKE-SSSVLSCDISFDD-KYIVTGSGDK-KATVYE 702 (705)
T ss_pred hhhhccCccccceeeccc-cCcceeeeeccCc-eEEEecCCCc-ceEEEE
Confidence 344454444654333321 2334333444443 4555554432 344554
No 306
>KOG0283|consensus
Probab=97.44 E-value=0.0039 Score=68.65 Aligned_cols=197 Identities=10% Similarity=0.120 Sum_probs=108.6
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEE-EEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYN-QYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~-~~~~~~~~~~~~~~~~ 221 (734)
.|-.++||-++-.|-=+.| .++++|++...+.|..-..+--+..++|.|-.+..|.. +.|.
T Consensus 371 DILDlSWSKn~fLLSSSMD------KTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~------------ 432 (712)
T KOG0283|consen 371 DILDLSWSKNNFLLSSSMD------KTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDG------------ 432 (712)
T ss_pred hheecccccCCeeEecccc------ccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeeccccc------------
Confidence 3557889988865553333 57999999988887644444444788999955554444 3332
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc-----
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL----- 296 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~----- 296 (734)
++.+|.|-..+ |....+-...+..++++|||++.++-... ..+++++..+.. +.....+
T Consensus 433 ----KvRiWsI~d~~-----Vv~W~Dl~~lITAvcy~PdGk~avIGt~~----G~C~fY~t~~lk---~~~~~~I~~~~~ 496 (712)
T KOG0283|consen 433 ----KVRLWSISDKK-----VVDWNDLRDLITAVCYSPDGKGAVIGTFN----GYCRFYDTEGLK---LVSDFHIRLHNK 496 (712)
T ss_pred ----ceEEeecCcCe-----eEeehhhhhhheeEEeccCCceEEEEEec----cEEEEEEccCCe---EEEeeeEeeccC
Confidence 68888875432 22333334577899999999998875433 355666655411 1000000
Q ss_pred eeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--CCceeEEEEEeeCCEEEEEEEeCC
Q psy4818 297 KTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED--ENRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 297 ~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
++....+-.+..++.-+.+.+++.+|. .+|-.+|+...+ +...+.+. ....+...+..++++|+ ...++
T Consensus 497 Kk~~~~rITG~Q~~p~~~~~vLVTSnD----SrIRI~d~~~~~---lv~KfKG~~n~~SQ~~Asfs~Dgk~IV-s~seD- 567 (712)
T KOG0283|consen 497 KKKQGKRITGLQFFPGDPDEVLVTSND----SRIRIYDGRDKD---LVHKFKGFRNTSSQISASFSSDGKHIV-SASED- 567 (712)
T ss_pred ccccCceeeeeEecCCCCCeEEEecCC----CceEEEeccchh---hhhhhcccccCCcceeeeEccCCCEEE-EeecC-
Confidence 000011111223333344568887775 468888874432 12222221 11223333334545555 44455
Q ss_pred ceeEEEEEC
Q psy4818 375 RSVMDLHDL 383 (734)
Q Consensus 375 ~~~l~~~dl 383 (734)
..+|+|+.
T Consensus 568 -s~VYiW~~ 575 (712)
T KOG0283|consen 568 -SWVYIWKN 575 (712)
T ss_pred -ceEEEEeC
Confidence 68999987
No 307
>KOG2314|consensus
Probab=97.43 E-value=0.027 Score=59.32 Aligned_cols=267 Identities=13% Similarity=0.101 Sum_probs=128.7
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc--cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE--VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~--~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+.-..+.|||-|.||+- ....| |-+| +|+.... ........-+.+||..++|+--+..... -.
T Consensus 210 nWTetyv~wSP~GTYL~t-~Hk~G-----I~lW---GG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~-----~~ 275 (698)
T KOG2314|consen 210 NWTETYVRWSPKGTYLVT-FHKQG-----IALW---GGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPII-----VE 275 (698)
T ss_pred cceeeeEEecCCceEEEE-Eeccc-----eeee---cCccHHHHHhccCCCceeeecCCccceEEEecCCccc-----cC
Confidence 456677999999999873 22232 3333 4442110 1111122467899999988755432211 11
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCe-eEEEEEEecCCcEEEEEEecCCC---CceEEEEeCCCCCCCccc---
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS-LGLHSEVTDCGRYLLVSTSNNTQ---GSDLHYFDLHSLPDGKIS--- 291 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~-~~~~~~~SpDG~~l~~~~~~~~~---~~~i~~~d~~~~~~~~l~--- 291 (734)
.+....+++.+|++.|+.... -|...+.+. ...-+.||-|+||+|-....+-. ....+++|..+.....+.
T Consensus 276 ~~d~e~~~l~IWDI~tG~lkr--sF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~Fs 353 (698)
T KOG2314|consen 276 EDDNEGQQLIIWDIATGLLKR--SFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFS 353 (698)
T ss_pred cccCCCceEEEEEccccchhc--ceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcc
Confidence 123456789999999876432 122111110 11235677777777643321100 011233332221111100
Q ss_pred ---------------CCCCcee-e--------e--cc-cc--ceEEEEEecCCeEEEEeCCCCC--------CceEEEEe
Q psy4818 292 ---------------GKFPLKT-V--------I--PG-MD--HHHEIIANNGPELIVKTTKNAP--------KGKVVTIN 334 (734)
Q Consensus 292 ---------------~~~~~~~-l--------~--~~-~~--~~~~~~s~dg~~l~~~s~~~~~--------~~~l~~~d 334 (734)
...+.+. | + .. ++ ..-..|...|++|.|-.++... +..|++++
T Consensus 354 wsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrir 433 (698)
T KOG2314|consen 354 WSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIR 433 (698)
T ss_pred cCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEee
Confidence 0000000 0 0 00 00 0111388899999988776311 33455555
Q ss_pred cCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECC-CCceeeee-CCCCceEEeeccCcccceEE
Q psy4818 335 LNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-TGKRLHSF-PLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~-~g~~~~~l-~~~~g~v~~~~~~~d~~~l~ 412 (734)
-+.-. ...++-. ..++...+-+.++++.+.........+..|-++ ++.....+ .++.-....+.++|.|.-++
T Consensus 434 eKdIp----ve~velk-e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvv 508 (698)
T KOG2314|consen 434 EKDIP----VEVVELK-ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVV 508 (698)
T ss_pred ccCCC----ceeeecc-hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEE
Confidence 33211 3333333 344544444556777666665555556665554 33322222 22323344677889997766
Q ss_pred EEEecCCCCceEEEEeC
Q psy4818 413 YGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 413 ~~~ss~~~P~~~~~~d~ 429 (734)
+..-.. .-+.++-||+
T Consensus 509 va~l~s-~~g~l~F~D~ 524 (698)
T KOG2314|consen 509 VAALVS-RRGDLEFYDT 524 (698)
T ss_pred EEEecc-cccceEEEec
Confidence 543221 4567888887
No 308
>KOG0319|consensus
Probab=97.43 E-value=0.022 Score=62.00 Aligned_cols=204 Identities=11% Similarity=0.119 Sum_probs=120.5
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc--ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
...+..+.++||+++|..... + ..|.+|.+.+|+.+..- +........++.|-| .+.-+..
T Consensus 62 ~d~ita~~l~~d~~~L~~a~r-s----~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g-~LlAtgg----------- 124 (775)
T KOG0319|consen 62 EDEITALALTPDEEVLVTASR-S----QLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTG-TLLATGG----------- 124 (775)
T ss_pred hhhhheeeecCCccEEEEeec-c----ceEEEEEcccchHhHhHhhccCCCeEEEEEcCCC-ceEEecc-----------
Confidence 344778999999988876653 2 57999999999865422 222223467888888 4443321
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
....+.+|++..+. .+....+.++.+..+.|.|+-.+.++.+ +.....+++||+.++.. + ...
T Consensus 125 ----aD~~v~VWdi~~~~----~th~fkG~gGvVssl~F~~~~~~~lL~s--g~~D~~v~vwnl~~~~t-c------l~~ 187 (775)
T KOG0319|consen 125 ----ADGRVKVWDIKNGY----CTHSFKGHGGVVSSLLFHPHWNRWLLAS--GATDGTVRVWNLNDKRT-C------LHT 187 (775)
T ss_pred ----ccceEEEEEeeCCE----EEEEecCCCceEEEEEeCCccchhheee--cCCCceEEEEEcccCch-H------HHH
Confidence 12268888887653 3444455677788889999876533332 23347899999987221 1 112
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC-----CEEEEEEEe
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-----NKLIVHYIQ 372 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~~~ 372 (734)
+..+....... +++|+..++.++.. .-+++||+..-+ ...++|. ...++++...++ +..+++.
T Consensus 188 ~~~H~S~vtsL~~~~d~~~~ls~~RD----kvi~vwd~~~~~---~l~~lp~--ye~~E~vv~l~~~~~~~~~~~~Ta-- 256 (775)
T KOG0319|consen 188 MILHKSAVTSLAFSEDSLELLSVGRD----KVIIVWDLVQYK---KLKTLPL--YESLESVVRLREELGGKGEYIITA-- 256 (775)
T ss_pred HHhhhhheeeeeeccCCceEEEeccC----cEEEEeehhhhh---hhheech--hhheeeEEEechhcCCcceEEEEe--
Confidence 22232333332 78888777655432 347888985432 1233333 344555544332 1244443
Q ss_pred CCceeEEEEECCCCcee
Q psy4818 373 NVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~ 389 (734)
++...+..||.++++..
T Consensus 257 G~~g~~~~~d~es~~~~ 273 (775)
T KOG0319|consen 257 GGSGVVQYWDSESGKCV 273 (775)
T ss_pred cCCceEEEEecccchhh
Confidence 44568889999887753
No 309
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.41 E-value=0.00024 Score=62.87 Aligned_cols=119 Identities=21% Similarity=0.326 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccccc--ccCCC------
Q psy4818 553 QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSES--EFGSP------ 624 (734)
Q Consensus 553 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~--~~g~~------ 624 (734)
.+--+|++++ +-|.+..+.|.|+||+.++....++|++|..+|+.+|+.|...+... ++.. -|..|
T Consensus 88 ~AyerYv~eE--alpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~----yyddDv~ynsP~dylpg 161 (227)
T COG4947 88 RAYERYVIEE--ALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGG----YYDDDVYYNSPSDYLPG 161 (227)
T ss_pred HHHHHHHHHh--hcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccc----cccCceeecChhhhccC
Confidence 3445577766 34567889999999999999999999999999999999988754321 1100 01111
Q ss_pred -CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCC
Q psy4818 625 -NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 702 (734)
Q Consensus 625 -~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~ 702 (734)
.++-..+.++ . + .+.+..|..|+..+ +..++.+.|..+ .+|..+.++.+-.|-
T Consensus 162 ~~dp~~l~rlr---------~----~---~~vfc~G~e~~~L~--~~~~L~~~l~dK-------qipaw~~~WggvaHd 215 (227)
T COG4947 162 LADPFRLERLR---------R----I---DMVFCIGDEDPFLD--NNQHLSRLLSDK-------QIPAWMHVWGGVAHD 215 (227)
T ss_pred CcChHHHHHHh---------h----c---cEEEEecCcccccc--chHHHHHHhccc-------cccHHHHHhcccccc
Confidence 1111111111 1 1 27788898887544 456777888776 778888777666664
No 310
>KOG0299|consensus
Probab=97.41 E-value=0.029 Score=57.71 Aligned_cols=239 Identities=12% Similarity=0.125 Sum_probs=115.3
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
-.+-..++||||+|||+. .....|.|||..+.+.+....+.. .+.+++|=-.-..+|-.+.+.
T Consensus 203 keil~~avS~Dgkylatg-----g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr----------- 266 (479)
T KOG0299|consen 203 KEILTLAVSSDGKYLATG-----GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR----------- 266 (479)
T ss_pred ceeEEEEEcCCCcEEEec-----CCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC-----------
Confidence 345679999999999963 233678899999998766533222 235677743333444444332
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|.+|+++.-. -...+|..+ .-+.++.-..-++-+ ++.. ....+.+|++.. .. +.+.
T Consensus 267 -----svkvw~~~~~s-~vetlyGHq---d~v~~IdaL~reR~v--tVGg--rDrT~rlwKi~e-es---------qlif 323 (479)
T KOG0299|consen 267 -----SVKVWSIDQLS-YVETLYGHQ---DGVLGIDALSRERCV--TVGG--RDRTVRLWKIPE-ES---------QLIF 323 (479)
T ss_pred -----ceEEEehhHhH-HHHHHhCCc---cceeeechhcccceE--Eecc--ccceeEEEeccc-cc---------eeee
Confidence 45566654321 011223222 123334433344433 2221 123455566543 11 1112
Q ss_pred ccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCce----EeecCCC--C--ceeEEEEEeeCCEEEEEEE
Q psy4818 301 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK----TLIPEDE--N--RTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 301 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~----~l~~~~~--~--~~~~~~~~~~~~~l~~~~~ 371 (734)
.+...... .---+..+++. +..++.|++|++....+--.. .+.+..+ . ..+.++....+.-++.+.+
T Consensus 324 rg~~~sidcv~~In~~Hfvs----GSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS 399 (479)
T KOG0299|consen 324 RGGEGSIDCVAFINDEHFVS----GSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGS 399 (479)
T ss_pred eCCCCCeeeEEEecccceee----ccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecC
Confidence 22222222 11122344442 233567888888764421001 1111100 0 0223333334355666655
Q ss_pred eCCceeEEEEECCCCc-eeeeeC-CC-CceEEeeccCcccceEEEEEecCCCCceEE
Q psy4818 372 QNVRSVMDLHDLNTGK-RLHSFP-LD-LGQITHISGRRKYNEVFYGFTSFLQPGTIY 425 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~-~~~~l~-~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~ 425 (734)
-+| .|.+|-+++|- .+..|. .+ .|.|.++.++.+++.++....--..-++++
T Consensus 400 ~~G--~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 400 WSG--CVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred CCC--ceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceee
Confidence 554 56677666662 122221 22 577888888888887776654444444444
No 311
>KOG0278|consensus
Probab=97.38 E-value=0.003 Score=59.56 Aligned_cols=217 Identities=11% Similarity=0.056 Sum_probs=120.9
Q ss_pred ceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 166 DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
..++-.|||.-+|..+..-...--+-..+||.|.++|+-...+. -|.+.++.....+.. +.
T Consensus 79 adftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ek----------------llrvfdln~p~App~---E~ 139 (334)
T KOG0278|consen 79 ADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEK----------------LLRVFDLNRPKAPPK---EI 139 (334)
T ss_pred ccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHH----------------HhhhhhccCCCCCch---hh
Confidence 34677889988887553221111225788999998887655422 133334433322211 11
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNA 325 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 325 (734)
..+++-+..+-|--..+.|+= + .+...|.+||..++. ....|.-.......-+++||+.|.+.-
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLS---S-add~tVRLWD~rTgt--------~v~sL~~~s~VtSlEvs~dG~ilTia~---- 203 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILS---S-ADDKTVRLWDHRTGT--------EVQSLEFNSPVTSLEVSQDGRILTIAY---- 203 (334)
T ss_pred cCCCCcceeEEEeccCceEEe---e-ccCCceEEEEeccCc--------EEEEEecCCCCcceeeccCCCEEEEec----
Confidence 123333445556555555541 1 344689999998842 233332222211122889988665421
Q ss_pred CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee-CCCCceEEeecc
Q psy4818 326 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHISG 404 (734)
Q Consensus 326 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l-~~~~g~v~~~~~ 404 (734)
...|..+|.++-. .|-.-.-...+.+..+..+..+++...++ ..+|.+|..+|+++... ....|-|.++.+
T Consensus 204 -gssV~Fwdaksf~-----~lKs~k~P~nV~SASL~P~k~~fVaGged--~~~~kfDy~TgeEi~~~nkgh~gpVhcVrF 275 (334)
T KOG0278|consen 204 -GSSVKFWDAKSFG-----LLKSYKMPCNVESASLHPKKEFFVAGGED--FKVYKFDYNTGEEIGSYNKGHFGPVHCVRF 275 (334)
T ss_pred -CceeEEecccccc-----ceeeccCccccccccccCCCceEEecCcc--eEEEEEeccCCceeeecccCCCCceEEEEE
Confidence 1347778876532 12122223455666665556777776665 57889999999986664 444778888999
Q ss_pred CcccceEEEEEecCCCCceEEEEeC
Q psy4818 405 RRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 405 ~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||| .++.+. ..-+.+.++-+
T Consensus 276 SPdG-E~yAsG---SEDGTirlWQt 296 (334)
T KOG0278|consen 276 SPDG-ELYASG---SEDGTIRLWQT 296 (334)
T ss_pred CCCC-ceeecc---CCCceEEEEEe
Confidence 9998 343333 33345666655
No 312
>KOG1524|consensus
Probab=97.38 E-value=0.019 Score=60.13 Aligned_cols=114 Identities=11% Similarity=0.152 Sum_probs=75.1
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
...+..-+|||||.-|.-+ | |...|.+|.-.+--.-........+...+|.|++..|+|+..+
T Consensus 104 ~~A~~~gRW~~dGtgLlt~----G-EDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~------------ 166 (737)
T KOG1524|consen 104 AAAISSGRWSPDGAGLLTA----G-EDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGG------------ 166 (737)
T ss_pred hhhhhhcccCCCCceeeee----c-CCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCC------------
Confidence 3456678999999877632 2 4468999985432111111222334688999999999998742
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
++++..+.... .+.....+++.+..+.|++....|+ +++...+..+||.-+
T Consensus 167 -----h~~IKpL~~n~----k~i~WkAHDGiiL~~~W~~~s~lI~----sgGED~kfKvWD~~G 217 (737)
T KOG1524|consen 167 -----HISIKPLAANS----KIIRWRAHDGLVLSLSWSTQSNIIA----SGGEDFRFKIWDAQG 217 (737)
T ss_pred -----eEEEeeccccc----ceeEEeccCcEEEEeecCcccccee----ecCCceeEEeecccC
Confidence 56666665432 2444455677888999999998877 334446677888766
No 313
>KOG0641|consensus
Probab=97.36 E-value=0.035 Score=51.61 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=40.5
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCce
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGK 329 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~ 329 (734)
-+..++..|.|+.|+ .+...+...++|+.++ ...+..-........+ |||-.. |+++. ..+.+
T Consensus 233 avaav~vdpsgrll~----sg~~dssc~lydirg~--------r~iq~f~phsadir~vrfsp~a~--yllt~--syd~~ 296 (350)
T KOG0641|consen 233 AVAAVAVDPSGRLLA----SGHADSSCMLYDIRGG--------RMIQRFHPHSADIRCVRFSPGAH--YLLTC--SYDMK 296 (350)
T ss_pred eeEEEEECCCcceee----eccCCCceEEEEeeCC--------ceeeeeCCCccceeEEEeCCCce--EEEEe--cccce
Confidence 456788999999887 2333467788899873 2222222222222233 887543 33332 12456
Q ss_pred EEEEecCC
Q psy4818 330 VVTINLNN 337 (734)
Q Consensus 330 l~~~d~~~ 337 (734)
|-+.|+.+
T Consensus 297 ikltdlqg 304 (350)
T KOG0641|consen 297 IKLTDLQG 304 (350)
T ss_pred EEEeeccc
Confidence 88888875
No 314
>KOG2106|consensus
Probab=97.35 E-value=0.038 Score=57.58 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=73.6
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
.....|.|.| .||...- ...+.|+|.++...++....+...+...+||||..|+..+.+.
T Consensus 410 ~~~~~fhpsg-~va~Gt~-----~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~-------------- 469 (626)
T KOG2106|consen 410 AECADFHPSG-VVAVGTA-----TGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDN-------------- 469 (626)
T ss_pred eeEeeccCcc-eEEEeec-----cceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCC--------------
Confidence 4567889999 7776543 2468899999977666555555567889999999999887654
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeC
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~ 282 (734)
.||++.+...... ...... ....++..+.||+|+++|.-. +...+|.+|..
T Consensus 470 --~iyiy~Vs~~g~~-y~r~~k-~~gs~ithLDwS~Ds~~~~~~----S~d~eiLyW~~ 520 (626)
T KOG2106|consen 470 --HIYIYRVSANGRK-YSRVGK-CSGSPITHLDWSSDSQFLVSN----SGDYEILYWKP 520 (626)
T ss_pred --eEEEEEECCCCcE-EEEeee-ecCceeEEeeecCCCceEEec----cCceEEEEEcc
Confidence 4666665543221 111111 112477889999999998722 23367888843
No 315
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.34 E-value=0.19 Score=55.09 Aligned_cols=255 Identities=14% Similarity=0.135 Sum_probs=143.2
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
++|+..+.|..+..+.++..|-+++..+|.+. -| .++ ....++.|.+||+.+.|...........++-..+.
T Consensus 137 s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~--~d--~i~----~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~g 208 (682)
T COG1770 137 SPDHNLLAYSVDVLGDEQYTLRFKDLATGEEL--PD--EIT----NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG 208 (682)
T ss_pred CCCCceEEEEEecccccEEEEEEEeccccccc--ch--hhc----ccccceEEecCCCeEEEEEEcCCCCcceEEEEecC
Confidence 47788888888877788888888776554422 11 111 11467999999999999988766555677776665
Q ss_pred C--CCc--ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeE
Q psy4818 177 T--GKD--YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 252 (734)
Q Consensus 177 ~--g~~--~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~ 252 (734)
+ ... +-+......+-++.=|-+.++|+....+ ....++++.+.+.+..+-.++...+.+-.+.
T Consensus 209 t~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~-------------~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~ 275 (682)
T COG1770 209 TPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGS-------------HITSEVRLLDADDPEAEPKVVLPRENGVEYS 275 (682)
T ss_pred CCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCC-------------CcceeEEEEecCCCCCceEEEEEcCCCcEEe
Confidence 5 211 1111111111233334555566555432 2234788888776665555555544322222
Q ss_pred EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEE
Q psy4818 253 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVV 331 (734)
Q Consensus 253 ~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~ 331 (734)
. ..-|.+.++.++.....-.|+...+.. ....|+.++.+...... .++--.++|++.-.. +...+|+
T Consensus 276 ~----eh~~d~f~i~sN~~gknf~l~~ap~~~-------~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~-~glp~v~ 343 (682)
T COG1770 276 V----EHGGDRFYILSNADGKNFKLVRAPVSA-------DKSNWRELIPHREDVRLEGVDLFADHLVLLERQ-EGLPRVV 343 (682)
T ss_pred e----eecCcEEEEEecCCCcceEEEEccCCC-------ChhcCeeeeccCCCceeeeeeeeccEEEEEecc-cCCceEE
Confidence 1 223666666666544335666666621 12457777766554433 366666777766554 4456788
Q ss_pred EEecCCCCCCCceEeecCCCCceeEEEE---EeeCCEEEEEEEeC-CceeEEEEECCCCce
Q psy4818 332 TINLNNPCEKNWKTLIPEDENRTLDVVA---AVANNKLIVHYIQN-VRSVMDLHDLNTGKR 388 (734)
Q Consensus 332 ~~d~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~l~~~~~~~-~~~~l~~~dl~~g~~ 388 (734)
+.+.++++. ..+.-.++... .+.. -.+.+.|-+.++.- ...+++-+|+.+++.
T Consensus 344 v~~~~~~~~---~~i~f~~~ay~-~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er 400 (682)
T COG1770 344 VRDRKTGEE---RGIAFDDEAYS-AGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGER 400 (682)
T ss_pred EEecCCCce---eeEEecchhhh-ccccCCCCCCCccEEEEeecccccceeEEeeccCCcE
Confidence 898876652 22222221111 1111 11224555555443 345899999998885
No 316
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.33 E-value=0.00096 Score=72.68 Aligned_cols=132 Identities=12% Similarity=0.114 Sum_probs=78.1
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc----------------HHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS----------------ISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~----------------~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
+..+..+++..++ .....|+||+++||||.+...++. ..-..|. + -..++.+|.+-|.||
T Consensus 60 ~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~-~~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-N-EAYVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-c-ccCeEEEeCCCCcCc
Confidence 4567777776554 245689999999999987433110 0011233 2 356777786533334
Q ss_pred Cchhhhcccc-ccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcC----------CCceeEEEEcC
Q psy4818 533 GEDWHNAGRL-LKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQR----------PELYGAALILV 600 (734)
Q Consensus 533 g~~~~~~~~~-~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~----------p~~~~a~v~~~ 600 (734)
+.. ..... .......+|+...++.+.++ ......++.|+|+||||..+..++.+- +=.++++++..
T Consensus 136 S~~--~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYA--DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccC--CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 422 11110 11123456666666654433 334457899999999999887776431 11478999999
Q ss_pred Ccchhc
Q psy4818 601 GALDML 606 (734)
Q Consensus 601 ~~~d~~ 606 (734)
|++|..
T Consensus 214 g~~dp~ 219 (462)
T PTZ00472 214 GLTDPY 219 (462)
T ss_pred cccChh
Confidence 988764
No 317
>KOG1445|consensus
Probab=97.32 E-value=0.0081 Score=63.88 Aligned_cols=196 Identities=10% Similarity=0.125 Sum_probs=105.7
Q ss_pred CCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-----ccccccCeeEEEc-CCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 150 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-----LKNVKFPSISWTH-DHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 150 SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-----~~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
--+.+++|.-....| ..|-|+++..--.+++. ..+..+..+.|.| |..+|+....+.
T Consensus 588 can~~rvAVPL~g~g---G~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg-------------- 650 (1012)
T KOG1445|consen 588 CANNKRVAVPLAGSG---GVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDG-------------- 650 (1012)
T ss_pred eeccceEEEEecCCC---ceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCc--------------
Confidence 345677777665544 36788887642233332 3344457789998 778888877543
Q ss_pred CcEEEEEECCCCCCC---CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 224 GQKIYYHVLGTEQDK---DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~---~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.-+||++..+..... ...+... +..-+.++.|.|=-.-++.++ .....|.+||+.++. ..-.+.
T Consensus 651 ~i~lWr~~a~gl~e~~~tPe~~lt~--h~eKI~slRfHPLAadvLa~a---syd~Ti~lWDl~~~~--------~~~~l~ 717 (1012)
T KOG1445|consen 651 QINLWRLTANGLPENEMTPEKILTI--HGEKITSLRFHPLAADVLAVA---SYDSTIELWDLANAK--------LYSRLV 717 (1012)
T ss_pred eEEEEEeccCCCCcccCCcceeeec--ccceEEEEEecchhhhHhhhh---hccceeeeeehhhhh--------hhheec
Confidence 223444443322110 0011111 122456788888544333332 223689999998832 223455
Q ss_pred ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC--CceeEEEEEeeCCEEEEEEEeCC--c
Q psy4818 301 PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE--NRTLDVVAAVANNKLIVHYIQNV--R 375 (734)
Q Consensus 301 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~~--~ 375 (734)
.+.+..+.. |||||+.++-+.. +++|.++...+.+ +.+..... +..-.-+.|.-++++++...-+. .
T Consensus 718 gHtdqIf~~AWSpdGr~~AtVcK----Dg~~rVy~Prs~e----~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~Se 789 (1012)
T KOG1445|consen 718 GHTDQIFGIAWSPDGRRIATVCK----DGTLRVYEPRSRE----QPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSE 789 (1012)
T ss_pred cCcCceeEEEECCCCcceeeeec----CceEEEeCCCCCC----CccccCCCCccCcceeEEEEecCcEEEEecccccch
Confidence 555666665 9999999886654 3568888877654 33333221 01111222333355555544332 2
Q ss_pred eeEEEEEC
Q psy4818 376 SVMDLHDL 383 (734)
Q Consensus 376 ~~l~~~dl 383 (734)
.+|.+||.
T Consensus 790 RQv~~Y~A 797 (1012)
T KOG1445|consen 790 RQVQMYDA 797 (1012)
T ss_pred hhhhhhhh
Confidence 36777764
No 318
>KOG2139|consensus
Probab=97.31 E-value=0.05 Score=54.39 Aligned_cols=198 Identities=11% Similarity=0.090 Sum_probs=103.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|.+ -.++|++-... -.|+++|-+...+... .....+...++|-|-+..-+.+....
T Consensus 99 ~dlr~~aWhq--H~~~fava~nd---dvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~----------- 162 (445)
T KOG2139|consen 99 IDLRGVAWHQ--HIIAFAVATND---DVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA----------- 162 (445)
T ss_pred cceeeEeech--hhhhhhhhccC---cEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecc-----------
Confidence 3477899998 44566553322 3678888666332211 11222346899999877655555422
Q ss_pred ccCCcEEEEEECCCC----------CCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 221 AHMGQKIYYHVLGTE----------QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~----------~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
-|.+|..... ......++..+.+ ..+.+..|.+||..++-.+ -..+.|.+||.+++..
T Consensus 163 -----gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS---~gsssi~iWdpdtg~~--- 230 (445)
T KOG2139|consen 163 -----GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTAS---FGSSSIMIWDPDTGQK--- 230 (445)
T ss_pred -----eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecc---cCcceEEEEcCCCCCc---
Confidence 2333322210 1112235555544 3677899999999887322 2237899999998432
Q ss_pred cCCCCceeeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEe-cCCCCCCCceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 291 SGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTIN-LNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
.++.....++.. -|||||++|+-.+-.. .++|+..+ .-+.+ .| ++.. ..+-..+..+.+..++
T Consensus 231 ------~pL~~~glgg~slLkwSPdgd~lfaAt~da--vfrlw~e~q~wt~e--rw--~lgs--grvqtacWspcGsfLL 296 (445)
T KOG2139|consen 231 ------IPLIPKGLGGFSLLKWSPDGDVLFAATCDA--VFRLWQENQSWTKE--RW--ILGS--GRVQTACWSPCGSFLL 296 (445)
T ss_pred ------ccccccCCCceeeEEEcCCCCEEEEecccc--eeeeehhcccceec--ce--eccC--CceeeeeecCCCCEEE
Confidence 122211223333 3999999887655432 34454211 11111 12 2222 2333344445555666
Q ss_pred EEEEeCCceeEEEEEC
Q psy4818 368 VHYIQNVRSVMDLHDL 383 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl 383 (734)
|+.. +.+.||....
T Consensus 297 f~~s--gsp~lysl~f 310 (445)
T KOG2139|consen 297 FACS--GSPRLYSLTF 310 (445)
T ss_pred EEEc--CCceEEEEee
Confidence 6553 4477877755
No 319
>KOG1036|consensus
Probab=97.31 E-value=0.18 Score=49.58 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=47.8
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..++.+.|||.+..|+.++- .| .|.++|+.+...+..-......-..+|.+ ...++....+.
T Consensus 14 d~IS~v~f~~~~~~LLvssW-Dg----slrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg------------ 75 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSSW-DG----SLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDG------------ 75 (323)
T ss_pred hceeeEEEcCcCCcEEEEec-cC----cEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCc------------
Confidence 45889999999999887763 33 58888887664332222222123456654 45666665433
Q ss_pred cCCcEEEEEECCCCCCC
Q psy4818 222 HMGQKIYYHVLGTEQDK 238 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~ 238 (734)
+|.++++.++...
T Consensus 76 ----~vr~~Dln~~~~~ 88 (323)
T KOG1036|consen 76 ----QVRRYDLNTGNED 88 (323)
T ss_pred ----eEEEEEecCCcce
Confidence 7899999887653
No 320
>KOG4389|consensus
Probab=97.30 E-value=0.00033 Score=72.51 Aligned_cols=127 Identities=25% Similarity=0.265 Sum_probs=79.9
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHH-HhcCeEEEEEecccCCCCCchhhhcccc-ccCCCch
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RHFNGIYAIPNIRGGGELGEDWHNAGRL-LKKQNCF 549 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~rG~~~~g~~~~~~~~~-~~~~~~~ 549 (734)
+.+-++.|. .++ .+.-++|++|||...+.+++....-...| +....+|+.+|||-|. +|-=+- .+.. ..+--.+
T Consensus 121 LYlNVW~P~-~~p-~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l-~~~~eaPGNmGl 196 (601)
T KOG4389|consen 121 LYLNVWAPA-ADP-YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYL-PGHPEAPGNMGL 196 (601)
T ss_pred eEEEEeccC-CCC-CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEec-CCCCCCCCccch
Confidence 455555663 122 22338999999865554444332222333 3346889999999754 552111 1111 1222346
Q ss_pred hHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEcCCcc
Q psy4818 550 DDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGAL 603 (734)
Q Consensus 550 ~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~ 603 (734)
-|..-|++|+.++- -.||+||.++|.|+|...+.+-+. .|. +|+-+|+++|-.
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCC
Confidence 78889999998762 269999999999999987766543 243 899999888754
No 321
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.28 E-value=0.0016 Score=66.97 Aligned_cols=90 Identities=17% Similarity=0.122 Sum_probs=60.9
Q ss_pred HHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc
Q psy4818 509 SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 509 ~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~ 588 (734)
.+..+|.++|..|++++.|+-. .+.+ ...+.....+++..|++.+.+. +-.++|-+.|++.||.+...+++.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd-~~~~-----~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPD-ASLA-----AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCch-Hhhh-----hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHHHHHHHh
Confidence 4567888899999999977522 2211 1112222234555677777654 445689999999999999999988
Q ss_pred CCCc-eeEEEEcCCcchhc
Q psy4818 589 RPEL-YGAALILVGALDML 606 (734)
Q Consensus 589 ~p~~-~~a~v~~~~~~d~~ 606 (734)
.+.. .+.++...-.+|+.
T Consensus 202 ~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 202 MAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred hhhcccccceeeecchhhc
Confidence 8876 77776665555543
No 322
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.25 E-value=0.15 Score=58.22 Aligned_cols=252 Identities=13% Similarity=0.091 Sum_probs=135.4
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEe-----C----
Q psy4818 92 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS-----K---- 162 (734)
Q Consensus 92 ~~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~-----~---- 162 (734)
....++++|..+++..++++. ..++|+.+.. + .+.. ....+..+.|||+|+.+++... .
T Consensus 63 ~~~~~spdg~~~~~~~~~~~~-~~~l~l~~~~-g----~~~~------~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~ 130 (620)
T COG1506 63 SELRWSPDGSVLAFVSTDGGR-VAQLYLVDVG-G----LITK------TAFGVSDARWSPDGDRIAFLTAEGASKRDGGD 130 (620)
T ss_pred cccccCCCCCEEEEEeccCCC-cceEEEEecC-C----ceee------eecccccceeCCCCCeEEEEecccccccCCce
Confidence 345557999999999865533 5677877654 3 1111 1244778999999999999311 1
Q ss_pred -------------CCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEE
Q psy4818 163 -------------SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 229 (734)
Q Consensus 163 -------------~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (734)
.|.+..+++++|.++ ........+..+..+.|.+|++.++........ .......+.
T Consensus 131 ~~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 200 (620)
T COG1506 131 HLFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDA---------DPWVTNLYV 200 (620)
T ss_pred eeeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeecccc---------CCceEeeEE
Confidence 122456778888766 322333444444566777777777776654310 011122333
Q ss_pred EECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC----CceEEEEeCCCCCCCcccCCCCceeeecc-cc
Q psy4818 230 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ----GSDLHYFDLHSLPDGKISGKFPLKTVIPG-MD 304 (734)
Q Consensus 230 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~----~~~i~~~d~~~~~~~~l~~~~~~~~l~~~-~~ 304 (734)
....++ .+.... + .......+.+.+||+.+++....... ...+++++.+.+..... . ...+ ..
T Consensus 201 ~~~~~~---~~~~~~-~-~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~------~-~~~~~~~ 268 (620)
T COG1506 201 LIEGNG---ELESLT-P-GEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGD------L-SSGDDTR 268 (620)
T ss_pred EecCCC---ceEEEc-C-CCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEecccccccee------e-ccCCccc
Confidence 322222 111111 2 22346678999999998887765432 15667766333111110 0 0000 00
Q ss_pred ceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC-ceeEEEEE
Q psy4818 305 HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV-RSVMDLHD 382 (734)
Q Consensus 305 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~~d 382 (734)
.... ...-++..++|.+........++..+..+.. ..+.... ...+..+.. +++.+++...... .+++++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~----~~~~~~~-~~~v~~f~~-~~~~~~~~~s~~~~p~~i~~~~ 342 (620)
T COG1506 269 GAWAVEGGLDGDGLLFIATDGGGSSPLFRVDDLGGG----VEGLSGD-DGGVPGFDV-DGRKLALAYSSPTEPPEIYLYD 342 (620)
T ss_pred CcHHhccccCCCcEEEEEecCCCceEEEEEeccCCc----eeeecCC-CceEEEEee-CCCEEEEEecCCCCccceEEEc
Confidence 0011 1224667788777764445556666654433 3333333 344455544 5577777776554 56899998
Q ss_pred C
Q psy4818 383 L 383 (734)
Q Consensus 383 l 383 (734)
.
T Consensus 343 ~ 343 (620)
T COG1506 343 R 343 (620)
T ss_pred C
Confidence 6
No 323
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.24 E-value=0.036 Score=57.87 Aligned_cols=256 Identities=11% Similarity=0.002 Sum_probs=133.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc-cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~-~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
+.+...+|||.|++|++.-. ..|.+++-..+..+ +..-.. .....+||.+++|.--......+ ++.....
T Consensus 33 ~p~~~~~~SP~G~~l~~~~~------~~V~~~~g~~~~~l~~~~~~~--V~~~~fSP~~kYL~tw~~~pi~~-pe~e~sp 103 (561)
T COG5354 33 WPVAYVSESPLGTYLFSEHA------AGVECWGGPSKAKLVRFRHPD--VKYLDFSPNEKYLVTWSREPIIE-PEIEISP 103 (561)
T ss_pred cchhheeecCcchheehhhc------cceEEccccchhheeeeecCC--ceecccCcccceeeeeccCCccC-hhhccCC
Confidence 45678999999999986432 23555554443322 222222 35678899999887655433211 1111111
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEe--cCCCC--eeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVE--FPNGR--SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~--~~~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
...-.++++|++.++. +++. ....+ +|- -+.||-|.++++.... +.++++++.. .-. ..+.
T Consensus 104 ~~~~n~~~vwd~~sg~----iv~sf~~~~q~~~~Wp-~~k~s~~D~y~ARvv~-----~sl~i~e~t~-n~~----~~p~ 168 (561)
T COG5354 104 FTSKNNVFVWDIASGM----IVFSFNGISQPYLGWP-VLKFSIDDKYVARVVG-----SSLYIHEITD-NIE----EHPF 168 (561)
T ss_pred ccccCceeEEeccCce----eEeeccccCCcccccc-eeeeeecchhhhhhcc-----CeEEEEecCC-ccc----cCch
Confidence 2222378899988763 3333 22222 221 3689999999985532 5789998732 211 1222
Q ss_pred eeeeccccceEEE-EEecC--CeEEEEeCC-CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 297 KTVIPGMDHHHEI-IANNG--PELIVKTTK-NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg--~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
..+-. .....+ |+|-| +.|++.+-+ .+....+..+.+.....-..+.++.-. ...+-+- ..++.+++....
T Consensus 169 ~~lr~--~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~-~~qLkW~--~~g~~ll~l~~t 243 (561)
T COG5354 169 KNLRP--VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVS-GVQLKWQ--VLGKYLLVLVMT 243 (561)
T ss_pred hhccc--cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeec-ccEEEEe--cCCceEEEEEEE
Confidence 22211 111222 66653 445555433 333333444444322210112333222 2222222 223555554433
Q ss_pred C--------CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 N--------VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~--------~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ |.+.||++++ ++...+....-.+.|..++++|+++++.+.+ ...|..+-.+|+
T Consensus 244 ~~ksnKsyfgesnLyl~~~-~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~--g~~pa~~s~~~l 305 (561)
T COG5354 244 HTKSNKSYFGESNLYLLRI-TERSIPVEKDLKDPVHDFTWEPLSSRFAVIS--GYMPASVSVFDL 305 (561)
T ss_pred eeecccceeccceEEEEee-cccccceeccccccceeeeecccCCceeEEe--cccccceeeccc
Confidence 2 3468999998 4544332222256688999999998887654 234777777777
No 324
>KOG2315|consensus
Probab=97.21 E-value=0.021 Score=60.26 Aligned_cols=145 Identities=16% Similarity=0.197 Sum_probs=89.3
Q ss_pred eEEeCCCCcEEEEEEeC----CCC---ceEEEEEEECCCCCc-ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 146 LYAFSDNGKHFAYCLSK----SGS---DWNTLHIKDVDTGKD-YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~----~g~---~~~~l~v~dl~~g~~-~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
.+.|.+-|.-|...... +|. ....||++++++... ++.... ..+..+.|||+|+.++.+.--
T Consensus 222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~-GPVhdv~W~~s~~EF~VvyGf--------- 291 (566)
T KOG2315|consen 222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKE-GPVHDVTWSPSGREFAVVYGF--------- 291 (566)
T ss_pred EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCC-CCceEEEECCCCCEEEEEEec---------
Confidence 47788888877665432 221 125899999984433 233322 223689999999988877532
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|..+-++++... .+|+.+..+. -.+.|||-|++|++..-. .-..++-+||+.+. .++ .
T Consensus 292 -----MPAkvtifnlr~~-----~v~df~egpR--N~~~fnp~g~ii~lAGFG-NL~G~mEvwDv~n~--K~i------~ 350 (566)
T KOG2315|consen 292 -----MPAKVTIFNLRGK-----PVFDFPEGPR--NTAFFNPHGNIILLAGFG-NLPGDMEVWDVPNR--KLI------A 350 (566)
T ss_pred -----ccceEEEEcCCCC-----EeEeCCCCCc--cceEECCCCCEEEEeecC-CCCCceEEEeccch--hhc------c
Confidence 2446777777654 4555544442 247899999999986543 22368888998871 111 1
Q ss_pred eeeccccceEEEEEecCCeEEEEeC
Q psy4818 298 TVIPGMDHHHEIIANNGPELIVKTT 322 (734)
Q Consensus 298 ~l~~~~~~~~~~~s~dg~~l~~~s~ 322 (734)
-+...+..+.-|+|||++|+-.+.
T Consensus 351 -~~~a~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 351 -KFKAANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred -ccccCCceEEEEcCCCcEEEEEec
Confidence 111122233349999998886655
No 325
>KOG0313|consensus
Probab=97.19 E-value=0.0092 Score=59.78 Aligned_cols=120 Identities=18% Similarity=0.152 Sum_probs=86.7
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+++..++.+.|++ .-.+|+.+- ..+|.+||+++|........+..+..+..+|+.+.|+-...+.
T Consensus 258 GHt~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr--------- 322 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDR--------- 322 (423)
T ss_pred ccccceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCC---------
Confidence 3456688999999 447787753 3789999999998765555555567889999888777766543
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+.+|+..++... +..+....+..|+.++.|||-..+++++.+. .+.+.+||+.+
T Consensus 323 -------~irl~DPR~~~gs-~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~---D~t~klWDvRS 377 (423)
T KOG0313|consen 323 -------HIRLWDPRTGDGS-VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSY---DNTVKLWDVRS 377 (423)
T ss_pred -------ceeecCCCCCCCc-eeEEeeecchhhhhheecCCCCceEEEEEec---CCeEEEEEecc
Confidence 5777777766443 2333333444588899999999999987653 36788999887
No 326
>KOG0646|consensus
Probab=97.18 E-value=0.029 Score=57.90 Aligned_cols=217 Identities=12% Similarity=0.142 Sum_probs=112.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..+.-||+|.+|+- |....+||+|.+++|+.+....... ...-+.||-||+.|+-.+.|.
T Consensus 84 v~al~s~n~G~~l~a-----g~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg------------- 145 (476)
T KOG0646|consen 84 VHALASSNLGYFLLA-----GTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDG------------- 145 (476)
T ss_pred eeeeecCCCceEEEe-----ecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCc-------------
Confidence 567888999999884 3344579999999999654322111 235678999998776655433
Q ss_pred CCcEEEEEECCC-------CCCCCeeEEecCCCCeeEEEEEEecCC--cEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 223 MGQKIYYHVLGT-------EQDKDIPVVEFPNGRSLGLHSEVTDCG--RYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 223 ~~~~l~~~~l~t-------~~~~~~~v~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|..|.+-. .....+.+|. ++..-+.++..++-| .+| |+++ ....+.+||+..|.
T Consensus 146 ---~V~vW~l~~lv~a~~~~~~~p~~~f~--~HtlsITDl~ig~Gg~~~rl-~TaS---~D~t~k~wdlS~g~------- 209 (476)
T KOG0646|consen 146 ---AVLVWLLTDLVSADNDHSVKPLHIFS--DHTLSITDLQIGSGGTNARL-YTAS---EDRTIKLWDLSLGV------- 209 (476)
T ss_pred ---cEEEEEEEeecccccCCCccceeeec--cCcceeEEEEecCCCccceE-EEec---CCceEEEEEeccce-------
Confidence 344443321 1111222332 222233444444443 222 2322 22578888988731
Q ss_pred CCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCC--C------------CCceEeecCCCCceeEEEE
Q psy4818 294 FPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC--E------------KNWKTLIPEDENRTLDVVA 359 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~------------~~~~~l~~~~~~~~~~~~~ 359 (734)
-+..++-+.....-..+|-+..+|+-+ ++ ++|+..++.+.. . .+...++.+..+..+.-..
T Consensus 210 -LLlti~fp~si~av~lDpae~~~yiGt-~~---G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa 284 (476)
T KOG0646|consen 210 -LLLTITFPSSIKAVALDPAERVVYIGT-EE---GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA 284 (476)
T ss_pred -eeEEEecCCcceeEEEcccccEEEecC-Cc---ceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE
Confidence 111122111111113677666666533 33 345554443211 0 1123333333223444444
Q ss_pred EeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEe
Q psy4818 360 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITH 401 (734)
Q Consensus 360 ~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~ 401 (734)
..-++.++++...+ ..+.+||+.+.+.++.+..-.|.|+.
T Consensus 285 is~DgtlLlSGd~d--g~VcvWdi~S~Q~iRtl~~~kgpVtn 324 (476)
T KOG0646|consen 285 ISTDGTLLLSGDED--GKVCVWDIYSKQCIRTLQTSKGPVTN 324 (476)
T ss_pred EecCccEEEeeCCC--CCEEEEecchHHHHHHHhhhccccce
Confidence 44447888888776 47889999766666666522344433
No 327
>KOG1538|consensus
Probab=97.17 E-value=0.083 Score=56.92 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=45.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEe
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYC 208 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~ 208 (734)
..+..+++-|||..|..+.+ ..++++|+..|..++...+.- .+.-++||.||++++-.+.|
T Consensus 13 hci~d~afkPDGsqL~lAAg------~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aD 74 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAG------SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSAD 74 (1081)
T ss_pred cchheeEECCCCceEEEecC------CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCc
Confidence 35788999999999988763 469999999988655333222 23678999999988766543
No 328
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.16 E-value=0.032 Score=63.40 Aligned_cols=96 Identities=11% Similarity=0.184 Sum_probs=57.3
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEE-eCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC-CceEEEEEEECCCCC
Q psy4818 102 NYFYFHNKGLQNHSILYVQRNLTGSTEVF-LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG-SDWNTLHIKDVDTGK 179 (734)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~l-~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g-~~~~~l~v~dl~~g~ 179 (734)
++.|.....+ .|.+.+..+...+++ +.-+ ..+..|.|||||++|||+++..+ .....||+.||.+..
T Consensus 320 kiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~-------~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~ 388 (912)
T TIGR02171 320 KLAFRNDVTG----NLAYIDYTKGASRAVEIEDT-------ISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASG 388 (912)
T ss_pred eEEEEEcCCC----eEEEEecCCCCceEEEecCC-------CceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccC
Confidence 4555554322 466777666666655 4433 34778999999999999555444 123679999997643
Q ss_pred --cccccccccccCeeEEEcCCcE-EEEEEEe
Q psy4818 180 --DYPEVLKNVKFPSISWTHDHKG-FFYNQYC 208 (734)
Q Consensus 180 --~~~~~~~~~~~~~~~wSpDg~~-l~y~~~~ 208 (734)
.+....++..+.-..-...|.+ |.|++.-
T Consensus 389 ~~~vkl~ve~aaiprwrv~e~gdt~ivyv~~a 420 (912)
T TIGR02171 389 SGLVKLPVENAAIPRWRVLENGDTVIVYVSDA 420 (912)
T ss_pred CCceEeecccccccceEecCCCCeEEEEEcCC
Confidence 3333344442222333566665 5677653
No 329
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.15 E-value=0.0005 Score=71.14 Aligned_cols=114 Identities=16% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCCCCcEEEEecCCCCCcCCccccHHHHH-HHHh--cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHH
Q psy4818 484 RNRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRH--FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI 560 (734)
Q Consensus 484 ~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~--~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 560 (734)
.+...|++|++||..+......|...+.. ++.+ .++.|+++|...+... .+..+.. .-...-..+...+..|.
T Consensus 67 fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~--n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 67 FNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVA--NTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp --TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhh--hHHHHHHHHHHHHHHHH
Confidence 35679999999998666634444444433 5554 5899999998753321 1222211 00011123334566776
Q ss_pred HcCCCCCCcEEEEEcChHHHHHHHHHhcCCC--ceeEEEEcCC
Q psy4818 561 NKKYTKPKYITIMGGSNGGLLVGACLNQRPE--LYGAALILVG 601 (734)
Q Consensus 561 ~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~ 601 (734)
+...+++++|.|+|||.|+.+++.+..+... .+..++..-|
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 5555789999999999999999999877554 4455555444
No 330
>KOG4283|consensus
Probab=97.14 E-value=0.29 Score=47.73 Aligned_cols=169 Identities=11% Similarity=0.027 Sum_probs=91.8
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcE--EEEEEEecCCCCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKG--FFYNQYCDINGTADGT 217 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~--l~y~~~~~~~~~~~~~ 217 (734)
+.+++....|=|=..=+..+ ++-..+|.|||+.|-+...+-.-...+.+-+|||=... |+-+..
T Consensus 100 Hky~iss~~WyP~DtGmFts----sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gt---------- 165 (397)
T KOG4283|consen 100 HKYAISSAIWYPIDTGMFTS----SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGT---------- 165 (397)
T ss_pred ceeeeeeeEEeeecCceeec----ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEec----------
Confidence 35666666666644444332 33447899999988664332222223467788886542 333322
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc---C-C
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS---G-K 293 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~---~-~ 293 (734)
+..+|.+-++.++.-...+ ..+.+-+..+.|||...|++++.+. ...|.+||+.. ...++. . .
T Consensus 166 -----r~~~VrLCDi~SGs~sH~L----sGHr~~vlaV~Wsp~~e~vLatgsa---Dg~irlWDiRr-asgcf~~lD~hn 232 (397)
T KOG4283|consen 166 -----RDVQVRLCDIASGSFSHTL----SGHRDGVLAVEWSPSSEWVLATGSA---DGAIRLWDIRR-ASGCFRVLDQHN 232 (397)
T ss_pred -----CCCcEEEEeccCCcceeee----ccccCceEEEEeccCceeEEEecCC---CceEEEEEeec-ccceeEEeeccc
Confidence 2336777788776543322 2334456789999999999987643 25677777654 222221 0 0
Q ss_pred -CCceee---eccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 294 -FPLKTV---IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 294 -~~~~~l---~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
...+.+ +........ .|+.||++++..+. ..++-.++..++.
T Consensus 233 ~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gt----d~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 233 TKRPPILKTNTAHYGKVNGLAWTSDARYLASCGT----DDRIRVWNMESGR 279 (397)
T ss_pred CccCccccccccccceeeeeeecccchhhhhccC----ccceEEeecccCc
Confidence 011111 111111111 38888887775443 3456667765543
No 331
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.13 E-value=0.0047 Score=61.15 Aligned_cols=150 Identities=22% Similarity=0.220 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcchhccccccccCcccccccCC
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRFNKFTIAYYSESEFGS 623 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 623 (734)
.-+..++.+|.++..+ +++-++||||||+.+..++..+ |.+=+.+....||-....... .....-...-|
T Consensus 87 ~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~~~~~~~~~~g- 162 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-DQNQNDLNKNG- 162 (255)
T ss_dssp HHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--TTTT-CSTT--
T ss_pred HHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-cchhhhhcccC-
Confidence 3455678888777444 5899999999999999998763 444455555555544332211 10000011124
Q ss_pred CC-CHHHHHHHHhC-CccCCCCCCCCCccCCcEEEEecC------CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy4818 624 PN-NKTHFHNLLSY-SPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 695 (734)
Q Consensus 624 ~~-~~~~~~~~~~~-sp~~~~~~p~~~~~~P~~Li~~g~------~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 695 (734)
|. ..+.+..|.+. . .+++. ... +|-+.|. .|.+||...++.+..-++.. .....-.+
T Consensus 163 p~~~~~~y~~l~~~~~--~~~p~-----~i~-VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~-------~~~Y~e~~ 227 (255)
T PF06028_consen 163 PKSMTPMYQDLLKNRR--KNFPK-----NIQ-VLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR-------AKSYQEKT 227 (255)
T ss_dssp BSS--HHHHHHHHTHG--GGSTT-----T-E-EEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT-------SSEEEEEE
T ss_pred CcccCHHHHHHHHHHH--hhCCC-----CeE-EEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc-------cCceEEEE
Confidence 43 23445555433 1 12221 122 8999998 89999998887777766655 45555555
Q ss_pred eCC--CCCCCCCchHHhHHHHHHHHHHH
Q psy4818 696 EQD--AGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 696 ~~~--~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
+.| +.|.-... + .+....+..||
T Consensus 228 v~G~~a~HS~Lhe-N--~~V~~~I~~FL 252 (255)
T PF06028_consen 228 VTGKDAQHSQLHE-N--PQVDKLIIQFL 252 (255)
T ss_dssp EESGGGSCCGGGC-C--HHHHHHHHHHH
T ss_pred EECCCCccccCCC-C--HHHHHHHHHHh
Confidence 554 67865543 2 24445566666
No 332
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.13 E-value=0.0016 Score=43.76 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=21.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
...+.|||||++|+|++...+....+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 46899999999999999988333377875
No 333
>KOG0302|consensus
Probab=97.12 E-value=0.012 Score=58.83 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=96.7
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc----cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY----PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~----~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
++.||| +.+....+|+=...|+++-..+|... +.+.....+-.+.|||-.+.++++..-+
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D------------ 279 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD------------ 279 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC------------
Confidence 588999 22222234555568999998888742 2222222346799999999998876422
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
..|.+|++..++.+. .++.. .+..-+.-++|+.+-..|+ .+.+...+.+||+.... ...++-....
T Consensus 280 ---gsIrIWDiRs~~~~~-~~~~k-Ah~sDVNVISWnr~~~lLa----sG~DdGt~~iwDLR~~~-----~~~pVA~fk~ 345 (440)
T KOG0302|consen 280 ---GSIRIWDIRSGPKKA-AVSTK-AHNSDVNVISWNRREPLLA----SGGDDGTLSIWDLRQFK-----SGQPVATFKY 345 (440)
T ss_pred ---ceEEEEEecCCCccc-eeEee-ccCCceeeEEccCCcceee----ecCCCceEEEEEhhhcc-----CCCcceeEEe
Confidence 268888888775433 33332 2222344578988777555 23444688999997722 2233333333
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
+....... |+|.....+..+.. +.+|..||++-
T Consensus 346 Hk~pItsieW~p~e~s~iaasg~---D~QitiWDlsv 379 (440)
T KOG0302|consen 346 HKAPITSIEWHPHEDSVIAASGE---DNQITIWDLSV 379 (440)
T ss_pred ccCCeeEEEeccccCceEEeccC---CCcEEEEEeec
Confidence 44455555 99887766655433 44699999864
No 334
>KOG0319|consensus
Probab=97.02 E-value=0.06 Score=58.77 Aligned_cols=241 Identities=12% Similarity=0.129 Sum_probs=127.1
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcC---Cc-EEEEEEEecCCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHD---HK-GFFYNQYCDINGTAD 215 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpD---g~-~l~y~~~~~~~~~~~ 215 (734)
++-.+.+..+++|+.-+.++.. ...+.|||+..-+.+..........+....++ +| .++|++..
T Consensus 191 H~S~vtsL~~~~d~~~~ls~~R-----Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~------- 258 (775)
T KOG0319|consen 191 HKSAVTSLAFSEDSLELLSVGR-----DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGG------- 258 (775)
T ss_pred hhhheeeeeeccCCceEEEecc-----CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecC-------
Confidence 3456789999999988876542 25799999965543321111111124444444 33 24444421
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
...+.+++..++.- +.....++.+..........+++.++++.. ..++++|.+++. .
T Consensus 259 --------~g~~~~~d~es~~~--~~~~~~~~~~e~~~~~~~~~~~~~l~vtae-----Qnl~l~d~~~l~--------i 315 (775)
T KOG0319|consen 259 --------SGVVQYWDSESGKC--VYKQRQSDSEEIDHLLAIESMSQLLLVTAE-----QNLFLYDEDELT--------I 315 (775)
T ss_pred --------CceEEEEecccchh--hhhhccCCchhhhcceeccccCceEEEEcc-----ceEEEEEccccE--------E
Confidence 12455555544321 111011111112223444556676665432 468888887721 1
Q ss_pred ceeeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
...++...+.... ++.|+.+++++.+|.. ..++| ++.+.. ++ ++++..+.++ +......+.++++.+.|
T Consensus 316 ~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~--~lr~y--~~~~~~---c~-ii~GH~e~vl-SL~~~~~g~llat~sKD 386 (775)
T KOG0319|consen 316 VKQIVGYNDEILDMKFLGPEESHLAVATNSP--ELRLY--TLPTSY---CQ-IIPGHTEAVL-SLDVWSSGDLLATGSKD 386 (775)
T ss_pred ehhhcCCchhheeeeecCCccceEEEEeCCC--ceEEE--ecCCCc---eE-EEeCchhhee-eeeecccCcEEEEecCC
Confidence 1223332233333 4888889999988853 44555 777765 34 6666544444 33323325677777777
Q ss_pred CceeEEEEECCCCce----eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKR----LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~----~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..-.|+++ +++.. ....+...+++..+..+..+..++++.|+.. .+-+|++
T Consensus 387 ~svilWr~--~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~---tlK~W~l 441 (775)
T KOG0319|consen 387 KSVILWRL--NNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDC---TLKLWDL 441 (775)
T ss_pred ceEEEEEe--cCCcchhhhhhhhcccccccceeeecccCccEEEEecCCc---eEEEecC
Confidence 54455555 33322 1223334555666666666666777766654 4566666
No 335
>KOG0268|consensus
Probab=96.97 E-value=0.0097 Score=59.27 Aligned_cols=158 Identities=9% Similarity=0.164 Sum_probs=97.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
-.+..+.++|-...|.-+... ...|.++|+.++.++...+-..+-..++|+| ..+-|+..++
T Consensus 188 Dti~svkfNpvETsILas~~s----DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a~E------------ 249 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASCAS----DRSIVLYDLRQASPLKKVILTMRTNTICWNP--EAFNFVAANE------------ 249 (433)
T ss_pred CceeEEecCCCcchheeeecc----CCceEEEecccCCccceeeeeccccceecCc--cccceeeccc------------
Confidence 346678888888776654422 2469999999999877655555557899999 4566666433
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...||.++..--. ..+.++. ++..-+.++.|||-|+-++ +++....|.++....+..+.+- -+.
T Consensus 250 --D~nlY~~DmR~l~-~p~~v~~--dhvsAV~dVdfsptG~Efv----sgsyDksIRIf~~~~~~SRdiY-------htk 313 (433)
T KOG0268|consen 250 --DHNLYTYDMRNLS-RPLNVHK--DHVSAVMDVDFSPTGQEFV----SGSYDKSIRIFPVNHGHSRDIY-------HTK 313 (433)
T ss_pred --cccceehhhhhhc-ccchhhc--ccceeEEEeccCCCcchhc----cccccceEEEeecCCCcchhhh-------hHh
Confidence 3468888765332 1222333 3344677899999999987 3344477888888774322211 112
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
.++....+ ||.|.+.++--++ ..+-+|+....
T Consensus 314 RMq~V~~Vk~S~Dskyi~SGSd--d~nvRlWka~A 346 (433)
T KOG0268|consen 314 RMQHVFCVKYSMDSKYIISGSD--DGNVRLWKAKA 346 (433)
T ss_pred hhheeeEEEEeccccEEEecCC--Ccceeeeecch
Confidence 23344455 9999875543232 33556766554
No 336
>KOG0639|consensus
Probab=96.97 E-value=0.0064 Score=62.93 Aligned_cols=188 Identities=11% Similarity=0.116 Sum_probs=105.8
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccc-cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVK-FPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~-~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..+++|||.+ ++|+.-.+|+ |.|||+.....+....+..+ .+.+..|+||..|+-...|.
T Consensus 513 yALa~spDak-vcFsccsdGn----I~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDn-------------- 573 (705)
T KOG0639|consen 513 YALAISPDAK-VCFSCCSDGN----IAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDN-------------- 573 (705)
T ss_pred hhhhcCCccc-eeeeeccCCc----EEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCcc--------------
Confidence 3578999998 7788776664 99999988765543332221 25788999999887655433
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
.|..|++.++.. +.-++. ..-++++..+|.|.|+++- -..+.+++..... +. ...+....
T Consensus 574 --tvRcWDlregrq--lqqhdF---~SQIfSLg~cP~~dWlavG----Mens~vevlh~sk-p~--------kyqlhlhe 633 (705)
T KOG0639|consen 574 --TVRCWDLREGRQ--LQQHDF---SSQIFSLGYCPTGDWLAVG----MENSNVEVLHTSK-PE--------KYQLHLHE 633 (705)
T ss_pred --ceeehhhhhhhh--hhhhhh---hhhheecccCCCccceeee----cccCcEEEEecCC-cc--------ceeecccc
Confidence 688888876532 111111 1234678899999999963 2336778877665 21 11121111
Q ss_pred cceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 304 DHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 304 ~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
.-.... |++-|++++-+... +. |-.|...-+. .++...+...+....+..+++++++.+.+-...+|-
T Consensus 634 ScVLSlKFa~cGkwfvStGkD---nl-LnawrtPyGa-----siFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 634 SCVLSLKFAYCGKWFVSTGKD---NL-LNAWRTPYGA-----SIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYE 702 (705)
T ss_pred cEEEEEEecccCceeeecCch---hh-hhhccCcccc-----ceeeccccCcceeeeeccCceEEEecCCCcceEEEE
Confidence 111223 78888876633222 11 3223222121 233333333444444444477777765554445553
No 337
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.97 E-value=0.0069 Score=59.24 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=55.7
Q ss_pred CcEEEEecCCCCCcCC-ccccHHHH-HH-H--HhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc
Q psy4818 488 NPVIIYGYGGYGVSVL-PTFSISRC-MF-L--RHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 562 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~-~~~~~~~~-~~-l--~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 562 (734)
...|||+||..|+... .++..... .. . ....+.++..|+..- ...++-. .-....+-+..+++++.+.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~---~s~~~g~----~l~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEE---LSAFHGR----TLQRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcc---ccccccc----cHHHHHHHHHHHHHHHHHh
Confidence 4568899996444221 11111110 00 0 112577888887651 1111110 0001123344566666554
Q ss_pred C---CCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEE
Q psy4818 563 K---YTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALI 598 (734)
Q Consensus 563 ~---~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~ 598 (734)
. ...+++|.++||||||.++-.++...+ +..+.+|.
T Consensus 77 ~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 77 YKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred hhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 3 467889999999999999988886543 34566654
No 338
>KOG0313|consensus
Probab=96.96 E-value=0.09 Score=52.97 Aligned_cols=245 Identities=12% Similarity=0.068 Sum_probs=127.6
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEE-Ec-CCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISW-TH-DHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~w-Sp-Dg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
++++..+ +++|.-.+. ...+++||.++....+...........+| .+ +.+..+.++..+
T Consensus 108 VSsv~~~--~~~IltgsY-----Dg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~D------------ 168 (423)
T KOG0313|consen 108 VSSVKGA--SKWILTGSY-----DGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMD------------ 168 (423)
T ss_pred hhhhccc--CceEEEeec-----CCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCC------------
Confidence 5556666 666664332 24789999887654443322222234555 22 233333333211
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc----------
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS---------- 291 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~---------- 291 (734)
..-.+|.++.+....+ .+..-..+...+..++..+||..++= +.-.+.|-+|+.++-....+.
T Consensus 169 -qtl~Lw~~~~~~~~~~--~~~~~~GHk~~V~sVsv~~sgtr~~S----gS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 169 -QTLRLWKWNVGENKVK--ALKVCRGHKRSVDSVSVDSSGTRFCS----GSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred -ceEEEEEecCchhhhh--HHhHhcccccceeEEEecCCCCeEEe----ecccceeeecccCCCccccccccchhhhhhh
Confidence 1224555554433222 21111123335567888899988762 222356677763221111111
Q ss_pred -------CCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC
Q psy4818 292 -------GKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN 363 (734)
Q Consensus 292 -------~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 363 (734)
...|...+..+.+..-.+ |++ ...+|-.+ .++.|.+||+.++.. ...++... .+..+.....
T Consensus 242 ~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~S----wDHTIk~WDletg~~--~~~~~~~k---sl~~i~~~~~ 311 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVS----WDHTIKVWDLETGGL--KSTLTTNK---SLNCISYSPL 311 (423)
T ss_pred hhhhcccccCceEEecccccceeeEEEcC-CCceEeec----ccceEEEEEeecccc--eeeeecCc---ceeEeecccc
Confidence 011222232333333333 654 45555333 356799999988652 23444333 3333333333
Q ss_pred CEEEEEEEeCCceeEEEEECCCCc--e-eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGK--R-LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~--~-~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..++++...+ ..+.+||+.++. . .+.+..+...|+++.++|.....+++.+-.. .+-.+|+
T Consensus 312 ~~Ll~~gssd--r~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~---t~klWDv 375 (423)
T KOG0313|consen 312 SKLLASGSSD--RHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN---TVKLWDV 375 (423)
T ss_pred cceeeecCCC--CceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCC---eEEEEEe
Confidence 5677766555 578899997653 2 3455556667888889998877777765544 5667777
No 339
>KOG0277|consensus
Probab=96.96 E-value=0.066 Score=51.06 Aligned_cols=239 Identities=11% Similarity=0.107 Sum_probs=130.1
Q ss_pred eEEeCC-CCcEEEEEEeC----CCCceEEEEEEECCCCCcccc-----cccccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 146 LYAFSD-NGKHFAYCLSK----SGSDWNTLHIKDVDTGKDYPE-----VLKNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 146 ~~~~SP-DG~~la~~~~~----~g~~~~~l~v~dl~~g~~~~~-----~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
++.||| -..+||.+... .|+ ..|++.++..++-+.+ +... ...++||+...-++++..-+
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~--G~L~ile~~~~~gi~e~~s~d~~D~--LfdV~Wse~~e~~~~~a~GD------ 82 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGN--GRLFILEVTDPKGIQECQSYDTEDG--LFDVAWSENHENQVIAASGD------ 82 (311)
T ss_pred eeEecccccchhheeehhhcccccC--ceEEEEecCCCCCeEEEEeeecccc--eeEeeecCCCcceEEEEecC------
Confidence 577888 23446655432 344 5799999875443332 1222 25789999988888887522
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
..|.++++..+. ..+.++.+. ..-+.++.|++-.+++++++ +.. ..|.+|+..-+ ..
T Consensus 83 ---------GSLrl~d~~~~s-~Pi~~~kEH--~~EV~Svdwn~~~r~~~lts-SWD--~TiKLW~~~r~--------~S 139 (311)
T KOG0277|consen 83 ---------GSLRLFDLTMPS-KPIHKFKEH--KREVYSVDWNTVRRRIFLTS-SWD--GTIKLWDPNRP--------NS 139 (311)
T ss_pred ---------ceEEEeccCCCC-cchhHHHhh--hhheEEeccccccceeEEee-ccC--CceEeecCCCC--------cc
Confidence 257777755433 344455543 22356789999888888776 322 45667765541 12
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 373 (734)
+........-.+.. |+|.-.-++..... +..+-.+|+..+.. ...++-...+. -...+.+ +..++++...+
T Consensus 140 v~Tf~gh~~~Iy~a~~sp~~~nlfas~Sg---d~~l~lwdvr~~gk---~~~i~ah~~Ei-l~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 140 VQTFNGHNSCIYQAAFSPHIPNLFASASG---DGTLRLWDVRSPGK---FMSIEAHNSEI-LCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred eEeecCCccEEEEEecCCCCCCeEEEccC---CceEEEEEecCCCc---eeEEEecccee-EeecccccCCcEEEecCCC
Confidence 23333322333443 88865544433222 34466677765431 22233321222 2333332 25666666554
Q ss_pred CceeEEEEECCCCc-eeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~-~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..|+.||+..=+ .+-+|......|..+.+||....++.+.|-.- ++.++|.
T Consensus 213 --~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm---T~riw~~ 264 (311)
T KOG0277|consen 213 --NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM---TVRIWDP 264 (311)
T ss_pred --ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc---eEEeccc
Confidence 578999985433 23344434455677788887766666554322 3445555
No 340
>KOG0303|consensus
Probab=96.96 E-value=0.17 Score=51.30 Aligned_cols=116 Identities=9% Similarity=0.088 Sum_probs=78.4
Q ss_pred cEEEeeEEeCCCCcE-EEEEEeCCCCceEEEEEEECCCCCc-ccc-------cccccccCeeEEEcCCcEEEEEEEecCC
Q psy4818 141 TTALKLYAFSDNGKH-FAYCLSKSGSDWNTLHIKDVDTGKD-YPE-------VLKNVKFPSISWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~-la~~~~~~g~~~~~l~v~dl~~g~~-~~~-------~~~~~~~~~~~wSpDg~~l~y~~~~~~~ 211 (734)
+..+-...|.|-... || +|+|..+|.||.+-.+-. ... ....-+.+.+.|.|--.-++.++.
T Consensus 81 t~~vLDi~w~PfnD~vIA-----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag---- 151 (472)
T KOG0303|consen 81 TAPVLDIDWCPFNDCVIA-----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG---- 151 (472)
T ss_pred cccccccccCccCCceee-----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc----
Confidence 445667889996654 55 678889999999764432 111 111224567889887766666553
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
..+.|.+|+++|+.. ++ +. +++..+.+.+|+-||.+|+-+. ....|.++|..++
T Consensus 152 -----------~Dn~v~iWnv~tgea---li-~l-~hpd~i~S~sfn~dGs~l~Ttc----kDKkvRv~dpr~~ 205 (472)
T KOG0303|consen 152 -----------SDNTVSIWNVGTGEA---LI-TL-DHPDMVYSMSFNRDGSLLCTTC----KDKKVRVIDPRRG 205 (472)
T ss_pred -----------CCceEEEEeccCCce---ee-ec-CCCCeEEEEEeccCCceeeeec----ccceeEEEcCCCC
Confidence 234899999999853 22 22 2566888999999999998432 3378999998873
No 341
>KOG2394|consensus
Probab=96.91 E-value=0.0026 Score=66.39 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=58.5
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.+..++|||||++||.++.+ ..|+|+|..+.+.+-.. .++. --+.||||||+|+-...|+
T Consensus 292 ~in~f~FS~DG~~LA~VSqD-----GfLRvF~fdt~eLlg~mkSYFGGL--LCvcWSPDGKyIvtGGEDD---------- 354 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQD-----GFLRIFDFDTQELLGVMKSYFGGL--LCVCWSPDGKYIVTGGEDD---------- 354 (636)
T ss_pred cccceeEcCCCceEEEEecC-----ceEEEeeccHHHHHHHHHhhccce--EEEEEcCCccEEEecCCcc----------
Confidence 46679999999999987743 47999998876643221 1111 3469999999988766543
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD 259 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp 259 (734)
--+|| .+. +.++|-....+..|+..++|.|
T Consensus 355 ----LVtVw--Sf~----erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 355 ----LVTVW--SFE----ERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred ----eEEEE--Eec----cceEEEeccccccceeeEeecc
Confidence 12344 332 2334545445566877777766
No 342
>KOG0310|consensus
Probab=96.89 E-value=0.064 Score=55.72 Aligned_cols=222 Identities=14% Similarity=0.097 Sum_probs=121.3
Q ss_pred EEEeeEEeCCCCcE-EEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 142 TALKLYAFSDNGKH-FAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 142 ~~~~~~~~SPDG~~-la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..++.++|||..-+ +|.+.+ ..+-+++..+-..+. .....-...+..|-.||+-++....
T Consensus 27 ~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~------------ 88 (487)
T KOG0310|consen 27 NSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE------------ 88 (487)
T ss_pred CcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC------------
Confidence 45889999995433 454443 345566665544332 1111112367888899976554321
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce-e
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-T 298 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-~ 298 (734)
...|.+.+..+. ..+..+.....+ .....|+|++..++.+.+ +...+.+||+.+. ... .
T Consensus 89 ----sG~V~vfD~k~r--~iLR~~~ah~ap--v~~~~f~~~d~t~l~s~s---Dd~v~k~~d~s~a---------~v~~~ 148 (487)
T KOG0310|consen 89 ----SGHVKVFDMKSR--VILRQLYAHQAP--VHVTKFSPQDNTMLVSGS---DDKVVKYWDLSTA---------YVQAE 148 (487)
T ss_pred ----cCcEEEeccccH--HHHHHHhhccCc--eeEEEecccCCeEEEecC---CCceEEEEEcCCc---------EEEEE
Confidence 113555553321 111122221122 234678999998886553 3367778888872 111 2
Q ss_pred eeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 299 VIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 299 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
+....+.... .|+|-.+++++... .++.|-.||..... ..+..-+.+..++.+..-.++.+++++ |-++
T Consensus 149 l~~htDYVR~g~~~~~~~hivvtGs---YDg~vrl~DtR~~~----~~v~elnhg~pVe~vl~lpsgs~iasA---gGn~ 218 (487)
T KOG0310|consen 149 LSGHTDYVRCGDISPANDHIVVTGS---YDGKVRLWDTRSLT----SRVVELNHGCPVESVLALPSGSLIASA---GGNS 218 (487)
T ss_pred ecCCcceeEeeccccCCCeEEEecC---CCceEEEEEeccCC----ceeEEecCCCceeeEEEcCCCCEEEEc---CCCe
Confidence 2222232222 28888888887644 45678889987653 122222334666766655546777665 3368
Q ss_pred EEEEECCCCce-eeeeCCCCceEEeeccCcccceE
Q psy4818 378 MDLHDLNTGKR-LHSFPLDLGQITHISGRRKYNEV 411 (734)
Q Consensus 378 l~~~dl~~g~~-~~~l~~~~g~v~~~~~~~d~~~l 411 (734)
+.+||+.+|.. +.......-+|+++....++..+
T Consensus 219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rL 253 (487)
T KOG0310|consen 219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRL 253 (487)
T ss_pred EEEEEecCCceehhhhhcccceEEEEEeecCCceE
Confidence 99999965653 22222234566666665555444
No 343
>KOG2183|consensus
Probab=96.89 E-value=0.0047 Score=63.00 Aligned_cols=133 Identities=15% Similarity=0.197 Sum_probs=82.4
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc---HHHHHHHHhcCeEEEEEecccCC---CCCchhhhcccc
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRGGG---ELGEDWHNAGRL 542 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG~~---~~g~~~~~~~~~ 542 (734)
-.+.+...+....+-..+..|+++|. |- ..... .|. .-+.....+.+-.++.+..|-=| -||..-+.....
T Consensus 62 ~~tF~qRylin~~fw~~g~gPIffYt-GN-EGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~h 138 (492)
T KOG2183|consen 62 NKTFDQRYLINDDFWKKGEGPIFFYT-GN-EGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARH 138 (492)
T ss_pred ccceeeEEEEecccccCCCCceEEEe-CC-cccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhh
Confidence 34556666666555444457777664 32 22211 111 11234455678889999999622 223221111110
Q ss_pred ---ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEE-EEcCCcch
Q psy4818 543 ---LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA-LILVGALD 604 (734)
Q Consensus 543 ---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~-v~~~~~~d 604 (734)
..-+..+.|+...+.+|....-.....|.++|+||||+|++|.=.++|++..++ .+.+|++-
T Consensus 139 lgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 139 LGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLY 204 (492)
T ss_pred hccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEe
Confidence 112345789999999998775556678999999999999999999999977655 46777653
No 344
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.88 E-value=0.0017 Score=69.63 Aligned_cols=83 Identities=18% Similarity=0.260 Sum_probs=58.0
Q ss_pred HHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC
Q psy4818 510 RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR 589 (734)
Q Consensus 510 ~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~ 589 (734)
+.+.|.+.||.+ ..|++| +|-+|+.... ....++++...++.+.++ ....++.|+||||||+++...+.++
T Consensus 113 li~~L~~~GY~~-~~dL~g---~gYDwR~~~~---~~~~~~~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 113 MIEQLIKWGYKE-GKTLFG---FGYDFRQSNR---LPETMDGLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHcCCcc-CCCccc---CCCCcccccc---HHHHHHHHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHHHHC
Confidence 456678889877 679998 7777776421 122356676677766554 2235799999999999999999888
Q ss_pred CCc----eeEEEEcCC
Q psy4818 590 PEL----YGAALILVG 601 (734)
Q Consensus 590 p~~----~~a~v~~~~ 601 (734)
|+. .+..|+.++
T Consensus 184 p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 184 SDVFEKYVNSWIAIAA 199 (440)
T ss_pred CHhHHhHhccEEEECC
Confidence 874 355555444
No 345
>KOG0640|consensus
Probab=96.87 E-value=0.024 Score=55.33 Aligned_cols=228 Identities=15% Similarity=0.138 Sum_probs=124.8
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC------cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK------DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~------~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
.+..+.|.|-...|+ +|+...+|.++|...-. .+++ ... ..+++|.|.|..|+......
T Consensus 174 evn~l~FHPre~ILi-----S~srD~tvKlFDfsK~saKrA~K~~qd-~~~--vrsiSfHPsGefllvgTdHp------- 238 (430)
T KOG0640|consen 174 EVNDLDFHPRETILI-----SGSRDNTVKLFDFSKTSAKRAFKVFQD-TEP--VRSISFHPSGEFLLVGTDHP------- 238 (430)
T ss_pred cccceeecchhheEE-----eccCCCeEEEEecccHHHHHHHHHhhc-cce--eeeEeecCCCceEEEecCCC-------
Confidence 366788999998777 34455789999976422 1221 122 25889999999888766422
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCC--CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPN--GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
.+.++++.|-+- .+-..|+ +.+-+..+.+|+.|+. +++.+. ...|.+||--+ .+++.
T Consensus 239 ---------~~rlYdv~T~Qc---fvsanPd~qht~ai~~V~Ys~t~~l-YvTaSk---DG~IklwDGVS--~rCv~--- 297 (430)
T KOG0640|consen 239 ---------TLRLYDVNTYQC---FVSANPDDQHTGAITQVRYSSTGSL-YVTASK---DGAIKLWDGVS--NRCVR--- 297 (430)
T ss_pred ---------ceeEEeccceeE---eeecCcccccccceeEEEecCCccE-EEEecc---CCcEEeecccc--HHHHH---
Confidence 466667776542 1212222 1234567899999984 444433 25788998655 22221
Q ss_pred Cceeeeccccce--E--EEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--CCceeEEEEEeeCCEEEE
Q psy4818 295 PLKTVIPGMDHH--H--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED--ENRTLDVVAAVANNKLIV 368 (734)
Q Consensus 295 ~~~~l~~~~~~~--~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~ 368 (734)
. +.....+ . ..|+.+|++|+ + .|.+.-+++|.+.++.. +++.+..+ .......-..++..-=|+
T Consensus 298 ---t-~~~AH~gsevcSa~Ftkn~kyiL--s--SG~DS~vkLWEi~t~R~--l~~YtGAg~tgrq~~rtqAvFNhtEdyV 367 (430)
T KOG0640|consen 298 ---T-IGNAHGGSEVCSAVFTKNGKYIL--S--SGKDSTVKLWEISTGRM--LKEYTGAGTTGRQKHRTQAVFNHTEDYV 367 (430)
T ss_pred ---H-HHhhcCCceeeeEEEccCCeEEe--e--cCCcceeeeeeecCCce--EEEEecCCcccchhhhhhhhhcCccceE
Confidence 1 1111111 1 23888887655 2 24455688888877642 23333221 111122112222121222
Q ss_pred EEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEec
Q psy4818 369 HYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 369 ~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss 417 (734)
..-+.....+..||-.++..+..+.+. .+.+..+.-+|.+. .++.++.
T Consensus 368 l~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p-~FmTcsd 416 (430)
T KOG0640|consen 368 LFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEP-AFMTCSD 416 (430)
T ss_pred EccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCC-ceeeecc
Confidence 233344467999998888766666654 55555555555543 3444443
No 346
>KOG0647|consensus
Probab=96.85 E-value=0.2 Score=49.09 Aligned_cols=238 Identities=16% Similarity=0.155 Sum_probs=118.5
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC-CCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~-g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
-+++.++|||.-..++-+ |+...++++|+++. |...+... .....-...||-||..+|-...+.
T Consensus 28 DsIS~l~FSP~~~~~~~A----~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk--------- 94 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAA----GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDK--------- 94 (347)
T ss_pred cchheeEeccccCceEEe----cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCC---------
Confidence 458899999944433333 33445789999875 44333111 111125689999997777666544
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
++.+|+|.+++...+-.++. -+-...|-+...+-.+...+ -...|..||... . .++..
T Consensus 95 -------~~k~wDL~S~Q~~~v~~Hd~-----pvkt~~wv~~~~~~cl~TGS--WDKTlKfWD~R~-~-------~pv~t 152 (347)
T KOG0647|consen 95 -------QAKLWDLASGQVSQVAAHDA-----PVKTCHWVPGMNYQCLVTGS--WDKTLKFWDTRS-S-------NPVAT 152 (347)
T ss_pred -------ceEEEEccCCCeeeeeeccc-----ceeEEEEecCCCcceeEecc--cccceeecccCC-C-------Ceeee
Confidence 68889999987654433222 23346666555433333222 236889999876 1 12222
Q ss_pred eeccccceEEEEEecC-CeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 299 VIPGMDHHHEIIANNG-PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 299 l~~~~~~~~~~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
+- -.+..+ ..|- .-++++... .+ .|.+++|+++. ...+....+. ...+..+..+.++..++...-.|+-.
T Consensus 153 ~~-LPeRvY---a~Dv~~pm~vVata--~r-~i~vynL~n~~-te~k~~~SpL-k~Q~R~va~f~d~~~~alGsiEGrv~ 223 (347)
T KOG0647|consen 153 LQ-LPERVY---AADVLYPMAVVATA--ER-HIAVYNLENPP-TEFKRIESPL-KWQTRCVACFQDKDGFALGSIEGRVA 223 (347)
T ss_pred ee-ccceee---ehhccCceeEEEec--CC-cEEEEEcCCCc-chhhhhcCcc-cceeeEEEEEecCCceEeeeecceEE
Confidence 11 111111 1221 123333322 23 38888887643 1122222222 33344555554444445555555444
Q ss_pred EEEEECCCCceeeee----------CCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSF----------PLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l----------~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+| .+.....+ ..+ .+.|.++.+.|-.+.++-..+. +.+--+|-
T Consensus 224 iq~id--~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsD----Gtf~FWDk 280 (347)
T KOG0647|consen 224 IQYID--DPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSD----GTFSFWDK 280 (347)
T ss_pred EEecC--CCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCC----ceEEEecc
Confidence 44443 33111111 111 4456667777765555544333 23444554
No 347
>KOG0306|consensus
Probab=96.82 E-value=0.2 Score=55.10 Aligned_cols=243 Identities=12% Similarity=0.104 Sum_probs=138.8
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
+...+.++.+|.|...++ +..+ ..|.+|+..+++.+.....+ ..-...|-|-++.|+......
T Consensus 372 HR~dVRsl~vS~d~~~~~--Sga~----~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd~~Iv~G~k~G---------- 434 (888)
T KOG0306|consen 372 HRSDVRSLCVSSDSILLA--SGAG----ESIKIWNRDTLKCIRTITCG-YILASKFVPGDRYIVLGTKNG---------- 434 (888)
T ss_pred chhheeEEEeecCceeee--ecCC----CcEEEEEccCcceeEEeccc-cEEEEEecCCCceEEEeccCC----------
Confidence 345688899999987665 2212 35899999998876533222 224567788888887766432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC-----CCCCCc-ccCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-----SLPDGK-ISGK 293 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~-----~~~~~~-l~~~ 293 (734)
.|-+.++.+.. ++-..+.+.+...+++.+||++..+-.+. .+.|..||.. .|.+.+ |+
T Consensus 435 ------el~vfdlaS~~----l~Eti~AHdgaIWsi~~~pD~~g~vT~sa----DktVkfWdf~l~~~~~gt~~k~ls-- 498 (888)
T KOG0306|consen 435 ------ELQVFDLASAS----LVETIRAHDGAIWSISLSPDNKGFVTGSA----DKTVKFWDFKLVVSVPGTQKKVLS-- 498 (888)
T ss_pred ------ceEEEEeehhh----hhhhhhccccceeeeeecCCCCceEEecC----CcEEEEEeEEEEeccCcccceeee--
Confidence 46666766542 11112234456778999999999874322 2445555432 111111 11
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
..-.+...-.+..... +||||+.+++.-=. ..-++|.+| +-+. .-.|..+. -.+..+.+..+..++++.+.
T Consensus 499 l~~~rtLel~ddvL~v~~Spdgk~LaVsLLd--nTVkVyflD--tlKF--flsLYGHk--LPV~smDIS~DSklivTgSA 570 (888)
T KOG0306|consen 499 LKHTRTLELEDDVLCVSVSPDGKLLAVSLLD--NTVKVYFLD--TLKF--FLSLYGHK--LPVLSMDISPDSKLIVTGSA 570 (888)
T ss_pred eccceEEeccccEEEEEEcCCCcEEEEEecc--CeEEEEEec--ceee--eeeecccc--cceeEEeccCCcCeEEeccC
Confidence 0000111111222333 89999987764321 134566655 3331 12343333 33444555555788887766
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ ..+.+|-+.=|...+.+-.++.+|.++.+-|+ ..++|+++-. ..+-.||.
T Consensus 571 D--KnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~-~~~FFt~gKD---~kvKqWDg 621 (888)
T KOG0306|consen 571 D--KNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPK-THLFFTCGKD---GKVKQWDG 621 (888)
T ss_pred C--CceEEeccccchhhhhhhcccCceeEEEEccc-ceeEEEecCc---ceEEeech
Confidence 5 46888877668876777666667777777774 4566666543 35666765
No 348
>KOG1009|consensus
Probab=96.81 E-value=0.052 Score=55.12 Aligned_cols=113 Identities=15% Similarity=0.089 Sum_probs=68.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+...+||||+..+.+.+- ...+++||+..|..+....+.. ...+++|.|-+++|+-.+.+... .+ ...+
T Consensus 126 iydL~Ws~d~~~l~s~s~-----dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~---~~--~~~~ 195 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSV-----DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHP---EG--FSAK 195 (434)
T ss_pred hhhhhccCCCceeeeeec-----cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCccc---ce--eeee
Confidence 557899999999987653 3579999999998654333322 34789999999988877665410 00 0001
Q ss_pred CCcEEEEEE-----CCCC---CCCCeeEEecCCCCeeEEEEEEecCCcEEEE
Q psy4818 223 MGQKIYYHV-----LGTE---QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLV 266 (734)
Q Consensus 223 ~~~~l~~~~-----l~t~---~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~ 266 (734)
.-..++++. .+.. ......+|...--..|+...+|||||..++.
T Consensus 196 ~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvt 247 (434)
T KOG1009|consen 196 LKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVT 247 (434)
T ss_pred eeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEc
Confidence 111223322 1111 1111224443333457888999999998874
No 349
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.79 E-value=0.15 Score=50.96 Aligned_cols=149 Identities=13% Similarity=0.042 Sum_probs=80.5
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
..+.+++|+.++++.... ....||+... ++....++.. ..+..++|++||...++... .. ....+
T Consensus 28 s~AvS~dg~~~A~v~~~~--~~~~L~~~~~-~~~~~~~~~g--------~~l~~PS~d~~g~~W~v~~~---~~-~~~~~ 92 (253)
T PF10647_consen 28 SPAVSPDGSRVAAVSEGD--GGRSLYVGPA-GGPVRPVLTG--------GSLTRPSWDPDGWVWTVDDG---SG-GVRVV 92 (253)
T ss_pred ceEECCCCCeEEEEEEcC--CCCEEEEEcC-CCcceeeccC--------CccccccccCCCCEEEEEcC---CC-ceEEE
Confidence 344458999999988333 2345777654 3444444421 24788999999775554332 21 12222
Q ss_pred EECCCCCc--cccccc-cc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC--CeeE--Ee
Q psy4818 173 KDVDTGKD--YPEVLK-NV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK--DIPV--VE 244 (734)
Q Consensus 173 ~dl~~g~~--~~~~~~-~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~--~~~v--~~ 244 (734)
.+..+|+. +..... .. .+..+.+||||.+++++..... ..+|++..+-..... ..+. ..
T Consensus 93 ~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~-------------~~~v~va~V~r~~~g~~~~l~~~~~ 159 (253)
T PF10647_consen 93 RDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGG-------------GGRVYVAGVVRDGDGVPRRLTGPRR 159 (253)
T ss_pred EecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCC-------------CCeEEEEEEEeCCCCCcceeccceE
Confidence 24444432 211111 11 4578999999999999986431 235665543321111 1110 01
Q ss_pred -cCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 245 -FPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 245 -~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
......-..++.|+++++.+++...
T Consensus 160 ~~~~~~~~v~~v~W~~~~~L~V~~~~ 185 (253)
T PF10647_consen 160 VAPPLLSDVTDVAWSDDSTLVVLGRS 185 (253)
T ss_pred ecccccCcceeeeecCCCEEEEEeCC
Confidence 0011123457999999997776543
No 350
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.79 E-value=0.0055 Score=66.85 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=87.1
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccH-HHHHHHHhcCeEEEEEecccCCCCC----chhhh--ccccc
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI-SRCMFLRHFNGIYAIPNIRGGGELG----EDWHN--AGRLL 543 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~rG~~~~g----~~~~~--~~~~~ 543 (734)
.|...+.+|.++ + ...+..+-||+.......... .+...++ +||+++.-|- |+.+.. ..|.. ....+
T Consensus 16 ~i~fev~LP~~W--N--gR~~~~GgGG~~G~i~~~~~~~~~~~~~~-~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW--N--GRFLQVGGGGFAGGINYADGKASMATALA-RGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh--c--cCeEEECCCeeeCcccccccccccchhhh-cCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 677778888865 2 235666666665444332210 0223455 6999999983 332221 12221 11223
Q ss_pred cCCCchhHHHHHHHHHHHcCC-CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc
Q psy4818 544 KKQNCFDDFQAAAEYMINKKY-TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML 606 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~-~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~ 606 (734)
++...+.+...+.+.|++..| ..|++-...|.|.||--.+.++.++|+.|.++|+.+|..++.
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 445556677778888888755 578899999999999999999999999999999999976553
No 351
>KOG0264|consensus
Probab=96.77 E-value=0.34 Score=50.09 Aligned_cols=226 Identities=12% Similarity=0.103 Sum_probs=127.5
Q ss_pred EEEEEEECCCCCc--------cccc--ccccc-cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC
Q psy4818 168 NTLHIKDVDTGKD--------YPEV--LKNVK-FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ 236 (734)
Q Consensus 168 ~~l~v~dl~~g~~--------~~~~--~~~~~-~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~ 236 (734)
.+++|+|.+.-.- .++. .+... ..++.|++....-..+..++ ..|.+|++....
T Consensus 147 ~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d---------------~~i~lwdi~~~~ 211 (422)
T KOG0264|consen 147 GDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD---------------HTICLWDINAES 211 (422)
T ss_pred CCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC---------------CcEEEEeccccc
Confidence 5799999664321 1111 11111 25688988877666555432 368888877544
Q ss_pred CC-----CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-E
Q psy4818 237 DK-----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-I 310 (734)
Q Consensus 237 ~~-----~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~ 310 (734)
.+ .+.+|.. +...+..++|.+-.+.++-+.. +...+.+||+.++ +.+. .............. |
T Consensus 212 ~~~~~~~p~~~~~~--h~~~VeDV~~h~~h~~lF~sv~---dd~~L~iwD~R~~-~~~~-----~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 212 KEDKVVDPKTIFSG--HEDVVEDVAWHPLHEDLFGSVG---DDGKLMIWDTRSN-TSKP-----SHSVKAHSAEVNCVAF 280 (422)
T ss_pred cCCccccceEEeec--CCcceehhhccccchhhheeec---CCCeEEEEEcCCC-CCCC-----cccccccCCceeEEEe
Confidence 32 1234433 3335667899998888876553 3368999999862 2111 11111222223333 8
Q ss_pred EecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCC-Ccee
Q psy4818 311 ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT-GKRL 389 (734)
Q Consensus 311 s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~-g~~~ 389 (734)
.|-+..|+..... +..|.++|+.+-.. .+. .+.+.+..+++--+.+....+++++..+ .+|.+||+.. |+..
T Consensus 281 np~~~~ilAT~S~---D~tV~LwDlRnL~~-~lh-~~e~H~dev~~V~WSPh~etvLASSg~D--~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 281 NPFNEFILATGSA---DKTVALWDLRNLNK-PLH-TFEGHEDEVFQVEWSPHNETVLASSGTD--RRLNVWDLSRIGEEQ 353 (422)
T ss_pred CCCCCceEEeccC---CCcEEEeechhccc-Cce-eccCCCcceEEEEeCCCCCceeEecccC--CcEEEEecccccccc
Confidence 8887766654332 45699999976541 122 2233334554444445556788777666 5788888832 3221
Q ss_pred e---------e--eC--CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 390 H---------S--FP--LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 390 ~---------~--l~--~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. + +. +....|..++++|....++.+.+.. ..+.++.+
T Consensus 354 ~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD---N~LqIW~~ 403 (422)
T KOG0264|consen 354 SPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED---NILQIWQM 403 (422)
T ss_pred ChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC---ceEEEeec
Confidence 0 0 11 1134466788888887777766655 36777776
No 352
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.77 E-value=0.55 Score=55.85 Aligned_cols=264 Identities=10% Similarity=0.099 Sum_probs=127.7
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEE-eCCCCCeEEEeCCCCcCC-CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEE--
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQ-RNLTGSTEVFLDPNKLSK-DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK-- 173 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~d~~~~~~-~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~-- 173 (734)
...+.+|+........ ..+-+. ...++..+++.+...-.. .....+-++.+-+|...|.++.. +| +|.++
T Consensus 31 ~~sd~i~~~~~~~~~~-~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~-~G----di~~~~~ 104 (928)
T PF04762_consen 31 SDSDSIYFVLGPNEID-YVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALA-SG----DIILVRE 104 (928)
T ss_pred cCCCeEEEEECCCCcc-eEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEEC-Cc----eEEEEEc
Confidence 3445677766543221 222221 122334456666543211 12345778888899988887764 22 46666
Q ss_pred --ECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCC-----CCC---CCC--cccccCCcEEEEEECCCCCCC---
Q psy4818 174 --DVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDIN-----GTA---DGT--ETTAHMGQKIYYHVLGTEQDK--- 238 (734)
Q Consensus 174 --dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~-----~~~---~~~--~~~~~~~~~l~~~~l~t~~~~--- 238 (734)
+..+.+.-....-.......+||||+..|++++....- ..+ +.. ..+.+.. .-+.+|=+..+
T Consensus 105 ~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~---~~VsVGWGkKeTQF 181 (928)
T PF04762_consen 105 DPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGES---KHVSVGWGKKETQF 181 (928)
T ss_pred cCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCC---ceeeeccCcccCcc
Confidence 44444321111111123688999999999988743210 000 000 0000000 00111100000
Q ss_pred --------------------CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC--CceEEEEeCCCCCCCcccCCCCc
Q psy4818 239 --------------------DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 239 --------------------~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
+..... .++ ....++|-.||+|+++..-.... ...+.+|+-++ . |.....
T Consensus 182 ~Gs~gK~aa~~~~~p~~~~~d~~~~s--~dd-~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG-~---L~stSE- 253 (928)
T PF04762_consen 182 HGSAGKAAARQLRDPTVPKVDEGKLS--WDD-GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG-E---LQSTSE- 253 (928)
T ss_pred CcchhhhhhhhccCCCCCccccCccc--cCC-CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc-e---EEeccc-
Confidence 000000 111 23568999999999988763222 36788888765 1 111000
Q ss_pred eeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 297 KTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 297 ~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
-+.+.... -.|-|.|..|+-... .....+|..+.-++-....+..-. ......+....|..++.+++....+.
T Consensus 254 --~v~gLe~~-l~WrPsG~lIA~~q~-~~~~~~VvFfErNGLrhgeF~l~~-~~~~~~v~~l~Wn~ds~iLAv~~~~~-- 326 (928)
T PF04762_consen 254 --PVDGLEGA-LSWRPSGNLIASSQR-LPDRHDVVFFERNGLRHGEFTLRF-DPEEEKVIELAWNSDSEILAVWLEDR-- 326 (928)
T ss_pred --cCCCccCC-ccCCCCCCEEEEEEE-cCCCcEEEEEecCCcEeeeEecCC-CCCCceeeEEEECCCCCEEEEEecCC--
Confidence 01111111 139999987776553 444567888887664332222212 12234456677766566665555432
Q ss_pred eEEEEECCCC
Q psy4818 377 VMDLHDLNTG 386 (734)
Q Consensus 377 ~l~~~dl~~g 386 (734)
|.+|-..+-
T Consensus 327 -vqLWt~~NY 335 (928)
T PF04762_consen 327 -VQLWTRSNY 335 (928)
T ss_pred -ceEEEeeCC
Confidence 666755433
No 353
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.74 E-value=0.0065 Score=66.12 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=79.4
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccc---------c--------HHHHHHHHhcCeEEEEE
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF---------S--------ISRCMFLRHFNGIYAIP 524 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------~--------~~~~~~l~~~G~~v~~~ 524 (734)
+.+....+..+..+++..++ .....|+||++.||||++....+ . ..-..|.. -..++.+
T Consensus 16 l~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~l~i 91 (415)
T PF00450_consen 16 LPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK--FANLLFI 91 (415)
T ss_dssp EEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEEEEE
T ss_pred EecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc--ccceEEE
Confidence 33433456678777776655 24678999999999998653211 0 01123432 4778999
Q ss_pred ecccCCCCCchhhhccccccCCCchhHHHHHHHH-HHHcCCCCCCcEEEEEcChHHHHHHHHHh----cC------CCce
Q psy4818 525 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACLN----QR------PELY 593 (734)
Q Consensus 525 ~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~ri~i~G~S~GG~~~~~~~~----~~------p~~~ 593 (734)
|.+-|.||...-........-....+|+..+++. +..........+.|.|.||||..+..++. +. +=.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 9887777764422221111112334555555443 33344455668999999999987766543 23 2247
Q ss_pred eEEEEcCCcchhc
Q psy4818 594 GAALILVGALDML 606 (734)
Q Consensus 594 ~a~v~~~~~~d~~ 606 (734)
+++++..|++|..
T Consensus 172 kGi~IGng~~dp~ 184 (415)
T PF00450_consen 172 KGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEESE-SBHH
T ss_pred ccceecCcccccc
Confidence 9999999987754
No 354
>KOG2110|consensus
Probab=96.68 E-value=0.0095 Score=59.57 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=63.2
Q ss_pred eEEEeCCCCcCCC-----CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc---ccccCeeEEEcC
Q psy4818 127 TEVFLDPNKLSKD-----GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK---NVKFPSISWTHD 198 (734)
Q Consensus 127 ~~~l~d~~~~~~~-----~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~---~~~~~~~~wSpD 198 (734)
..+|+|...+... +...+..++|||||.+||-+++.+ ..|+|+.+.+|+.+.+-.. .+...+++||||
T Consensus 154 dV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKG----TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d 229 (391)
T KOG2110|consen 154 DVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKG----TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD 229 (391)
T ss_pred eEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCc----eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC
Confidence 3455665544332 345688899999999999877644 6899999999986443222 345679999999
Q ss_pred CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCC
Q psy4818 199 HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE 235 (734)
Q Consensus 199 g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~ 235 (734)
++.|..++..+ .|++.+|+..
T Consensus 230 s~~L~~sS~Te----------------TVHiFKL~~~ 250 (391)
T KOG2110|consen 230 SQFLAASSNTE----------------TVHIFKLEKV 250 (391)
T ss_pred CCeEEEecCCC----------------eEEEEEeccc
Confidence 99877766432 6777777654
No 355
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.65 E-value=0.14 Score=52.31 Aligned_cols=153 Identities=12% Similarity=0.031 Sum_probs=75.9
Q ss_pred EEeeEEeCCCCcEEEEEEeC-----CC--CceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSK-----SG--SDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~-----~g--~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
......+.|||+. .|.... .. .+...||.+|..++.. ..... -....+++|||||+.+|++-..
T Consensus 112 r~ND~~v~pdG~~-wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~-~l~~~~~~~~NGla~SpDg~tly~aDT~------ 183 (307)
T COG3386 112 RPNDGVVDPDGRI-WFGDMGYFDLGKSEERPTGSLYRVDPDGGVV-RLLDDDLTIPNGLAFSPDGKTLYVADTP------ 183 (307)
T ss_pred CCCceeEcCCCCE-EEeCCCccccCccccCCcceEEEEcCCCCEE-EeecCcEEecCceEECCCCCEEEEEeCC------
Confidence 3456788999984 444332 11 2234688888754432 22222 1223689999999988887542
Q ss_pred CCCcccccCCcEEEEEECCC---CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 215 DGTETTAHMGQKIYYHVLGT---EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t---~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
..+|++..++. ........+....+++.--+.+...||..-+ .. . .....|-+++.++ ..
T Consensus 184 ---------~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~-~a-~-~~g~~v~~~~pdG-~l---- 246 (307)
T COG3386 184 ---------ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWV-AA-V-WGGGRVVRFNPDG-KL---- 246 (307)
T ss_pred ---------CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEE-ec-c-cCCceEEEECCCC-cE----
Confidence 23688877652 1111111111111222223455556665432 11 1 1224666776664 11
Q ss_pred CCCCceeeecc-c-cceEEEEEecCCeEEEEeCCC
Q psy4818 292 GKFPLKTVIPG-M-DHHHEIIANNGPELIVKTTKN 324 (734)
Q Consensus 292 ~~~~~~~l~~~-~-~~~~~~~s~dg~~l~~~s~~~ 324 (734)
...+.-. . -....+-.++.+.||+++++.
T Consensus 247 ----~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 247 ----LGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred ----EEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 1111111 1 111123457778888888765
No 356
>KOG1539|consensus
Probab=96.64 E-value=0.0074 Score=66.40 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=67.1
Q ss_pred eEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 167 WNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
...|.++|+.|.+.++.-. ...+...++||||||+|+-.+.|. .|+.|++-++.--|.+.++.
T Consensus 555 df~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~----------------tIr~wDlpt~~lID~~~vd~ 618 (910)
T KOG1539|consen 555 DFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS----------------TIRTWDLPTGTLIDGLLVDS 618 (910)
T ss_pred ceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC----------------cEEEEeccCcceeeeEecCC
Confidence 3689999998887655433 223457899999999999888754 69999999887655555443
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~ 282 (734)
+ ..++++||.|.+||-+.. +.+.||+|.-
T Consensus 619 ~-----~~sls~SPngD~LAT~Hv---d~~gIylWsN 647 (910)
T KOG1539|consen 619 P-----CTSLSFSPNGDFLATVHV---DQNGIYLWSN 647 (910)
T ss_pred c-----ceeeEECCCCCEEEEEEe---cCceEEEEEc
Confidence 2 246899999999996542 2367888853
No 357
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.58 Score=50.02 Aligned_cols=214 Identities=13% Similarity=0.054 Sum_probs=118.4
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
.+..++++|+++...... ...+.++|+.+-+.+.....+....+++++||++.+|...... ..
T Consensus 77 ~~i~v~~~~~~vyv~~~~----~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~-------------~~ 139 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGD----SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN-------------GN 139 (381)
T ss_pred cceeeCCCCCeEEEecCC----CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc-------------CC
Confidence 467899999976544322 2479999977766543222222346899999999888776421 23
Q ss_pred cEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 304 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~ 304 (734)
..+...+-.+...... ++.. ..+ .+.+++|||+.++... ...+.|.++|..+.. +..............
T Consensus 140 ~~vsvid~~t~~~~~~-~~vG-~~P---~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~---v~~~~~~~~~~~~~~ 208 (381)
T COG3391 140 NTVSVIDAATNKVTAT-IPVG-NTP---TGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNS---VVRGSVGSLVGVGTG 208 (381)
T ss_pred ceEEEEeCCCCeEEEE-EecC-CCc---ceEEECCCCCeEEEEe---cCCCeEEEEeCCCcc---eeccccccccccCCC
Confidence 4677777665532221 2222 123 5789999999988754 233789999976621 110000000111112
Q ss_pred ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe-ecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 305 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 305 ~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
...-.+++||.++|+.-.... ...+..+|..++. .... .+........-...+++..+|+.... ...+++.|.
T Consensus 209 P~~i~v~~~g~~~yV~~~~~~-~~~v~~id~~~~~---v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~--~~~V~vid~ 282 (381)
T COG3391 209 PAGIAVDPDGNRVYVANDGSG-SNNVLKIDTATGN---VTATDLPVGSGAPRGVAVDPAGKAAYVANSQ--GGTVSVIDG 282 (381)
T ss_pred CceEEECCCCCEEEEEeccCC-CceEEEEeCCCce---EEEeccccccCCCCceeECCCCCEEEEEecC--CCeEEEEeC
Confidence 222348999998887654322 3568889987654 2221 11111111111222343455554433 467888887
Q ss_pred CCCceeeee
Q psy4818 384 NTGKRLHSF 392 (734)
Q Consensus 384 ~~g~~~~~l 392 (734)
.+......+
T Consensus 283 ~~~~v~~~~ 291 (381)
T COG3391 283 ATDRVVKTG 291 (381)
T ss_pred CCCceeeee
Confidence 665544333
No 358
>KOG0302|consensus
Probab=96.62 E-value=0.023 Score=57.02 Aligned_cols=128 Identities=13% Similarity=0.153 Sum_probs=81.6
Q ss_pred eCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC---cccccccccccCeeEEEcCCcEEEEEEE
Q psy4818 131 LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK---DYPEVLKNVKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 131 ~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~---~~~~~~~~~~~~~~~wSpDg~~l~y~~~ 207 (734)
+|..-+.. ++.++..++|||..+-+.++.+-.| .|.+||+..+. .+.....+.++.-+.|+-+-..|++..+
T Consensus 248 vd~~Pf~g-H~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~D 322 (440)
T KOG0302|consen 248 VDQRPFTG-HTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGD 322 (440)
T ss_pred ecCccccc-cccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCC
Confidence 35444432 5678889999999999998887765 49999999884 2222333445578999877764544443
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCC-CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
+. .+.+|+|..-+. +.+..|.-.. .-+.++.|+|....++..+ +..++|-+||+..
T Consensus 323 dG----------------t~~iwDLR~~~~~~pVA~fk~Hk--~pItsieW~p~e~s~iaas---g~D~QitiWDlsv 379 (440)
T KOG0302|consen 323 DG----------------TLSIWDLRQFKSGQPVATFKYHK--APITSIEWHPHEDSVIAAS---GEDNQITIWDLSV 379 (440)
T ss_pred Cc----------------eEEEEEhhhccCCCcceeEEecc--CCeeEEEeccccCceEEec---cCCCcEEEEEeec
Confidence 22 466666654332 2233444322 2456899999766655433 2337899999876
No 359
>KOG1524|consensus
Probab=96.60 E-value=0.046 Score=57.32 Aligned_cols=166 Identities=12% Similarity=0.074 Sum_probs=93.4
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
..-.|+|||..|+-...|. .|..|...+-- ..+++-. ...+..++|.|+...++|...
T Consensus 108 ~~gRW~~dGtgLlt~GEDG----------------~iKiWSrsGML-RStl~Q~----~~~v~c~~W~p~S~~vl~c~g- 165 (737)
T KOG1524|consen 108 SSGRWSPDGAGLLTAGEDG----------------VIKIWSRSGML-RSTVVQN----EESIRCARWAPNSNSIVFCQG- 165 (737)
T ss_pred hhcccCCCCceeeeecCCc----------------eEEEEeccchH-HHHHhhc----CceeEEEEECCCCCceEEecC-
Confidence 5678999999998766433 45555533211 1111111 124567899999999998542
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 349 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 349 (734)
..+++-++.-. .++ ..|+ .+..-.... |++..+.|+ .+|.+++.-.||.-+. .|+..
T Consensus 166 ----~h~~IKpL~~n--~k~---i~Wk---AHDGiiL~~~W~~~s~lI~----sgGED~kfKvWD~~G~------~Lf~S 223 (737)
T KOG1524|consen 166 ----GHISIKPLAAN--SKI---IRWR---AHDGLVLSLSWSTQSNIIA----SGGEDFRFKIWDAQGA------NLFTS 223 (737)
T ss_pred ----CeEEEeecccc--cce---eEEe---ccCcEEEEeecCcccccee----ecCCceeEEeecccCc------ccccC
Confidence 47788777651 110 1121 111112222 777766444 2355677777886543 23332
Q ss_pred -CCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEe
Q psy4818 350 -DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 350 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~s 416 (734)
.++..+.++.|.. +.+|+..+.+. + ++..| .|+|..+++++||..+...++
T Consensus 224 ~~~ey~ITSva~np-d~~~~v~S~nt---~------------R~~~p~~GSifnlsWS~DGTQ~a~gt~ 276 (737)
T KOG1524|consen 224 AAEEYAITSVAFNP-EKDYLLWSYNT---A------------RFSSPRVGSIFNLSWSADGTQATCGTS 276 (737)
T ss_pred Chhccceeeeeecc-ccceeeeeeee---e------------eecCCCccceEEEEEcCCCceeecccc
Confidence 2356677777766 35554443221 1 13334 678888899999877765544
No 360
>KOG0641|consensus
Probab=96.58 E-value=0.66 Score=43.41 Aligned_cols=246 Identities=12% Similarity=0.087 Sum_probs=124.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEE----EECCCCCcccc---------cc-cccccCeeEEEcCCcEEEEEEE
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHI----KDVDTGKDYPE---------VL-KNVKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v----~dl~~g~~~~~---------~~-~~~~~~~~~wSpDg~~l~y~~~ 207 (734)
..+..+.|.|.|+..|..++. ....|.. .|+..+..... .. ....+.-.+|||+|.-|+-.++
T Consensus 33 qairav~fhp~g~lyavgsns---kt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn 109 (350)
T KOG0641|consen 33 QAIRAVAFHPAGGLYAVGSNS---KTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN 109 (350)
T ss_pred hheeeEEecCCCceEEeccCC---ceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC
Confidence 457889999999988865532 2234433 33433321110 01 1112345799999998876664
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCC-CeeEEecCCCCeeEEEEEEec---CCcEEEEEEecCCCCceEEEEeCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDK-DIPVVEFPNGRSLGLHSEVTD---CGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~-~~~v~~~~~~~~~~~~~~~Sp---DG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
+. .-++...+.+|.+.. .-+-|.. +++.+..++|-. .|..|+.+. +.....||+-|-.
T Consensus 110 dk--------------~ik~l~fn~dt~~~~g~dle~nm--hdgtirdl~fld~~~s~~~il~s~--gagdc~iy~tdc~ 171 (350)
T KOG0641|consen 110 DK--------------TIKVLPFNADTCNATGHDLEFNM--HDGTIRDLAFLDDPESGGAILASA--GAGDCKIYITDCG 171 (350)
T ss_pred Cc--------------eEEEEecccccccccCcceeeee--cCCceeeeEEecCCCcCceEEEec--CCCcceEEEeecC
Confidence 32 112333333332210 0111222 122334455532 344454433 3344789999887
Q ss_pred CCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC------CCceeEE
Q psy4818 284 SLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED------ENRTLDV 357 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~------~~~~~~~ 357 (734)
.| .++..+...-.......+.+|- ++ .+. ..+..|-.||+.-.. ....+..+ +...+..
T Consensus 172 ~g--------~~~~a~sghtghilalyswn~~-m~-~sg--sqdktirfwdlrv~~---~v~~l~~~~~~~glessavaa 236 (350)
T KOG0641|consen 172 RG--------QGFHALSGHTGHILALYSWNGA-MF-ASG--SQDKTIRFWDLRVNS---CVNTLDNDFHDGGLESSAVAA 236 (350)
T ss_pred CC--------CcceeecCCcccEEEEEEecCc-EE-Ecc--CCCceEEEEeeeccc---eeeeccCcccCCCcccceeEE
Confidence 73 3445554433333333455543 22 222 223457777775433 12222211 1123444
Q ss_pred EEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 358 VAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.....++++++...+ +.-.+||+..|..++++......|..+.++|.. ...+.++ +.. .+-+-|+
T Consensus 237 v~vdpsgrll~sg~~d--ssc~lydirg~r~iq~f~phsadir~vrfsp~a-~yllt~s-yd~--~ikltdl 302 (350)
T KOG0641|consen 237 VAVDPSGRLLASGHAD--SSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA-HYLLTCS-YDM--KIKLTDL 302 (350)
T ss_pred EEECCCcceeeeccCC--CceEEEEeeCCceeeeeCCCccceeEEEeCCCc-eEEEEec-ccc--eEEEeec
Confidence 4444447787776555 566778887777777776556667777777754 3333443 322 4566666
No 361
>KOG3967|consensus
Probab=96.57 E-value=0.02 Score=52.92 Aligned_cols=111 Identities=12% Similarity=-0.002 Sum_probs=63.8
Q ss_pred EEEEEeccccCCCCCcEEEEecCCCCCcCC-------------cc-ccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 474 MYIIHRVGALRNRRNPVIIYGYGGYGVSVL-------------PT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 474 ~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-------------~~-~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
.+++..++.. ..+.-++|++||..-...+ -+ --+...+.. +.||-|++.|.- .-+.|++.
T Consensus 88 SFiF~s~~~l-t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv-~~Gygviv~N~N----~~~kfye~ 161 (297)
T KOG3967|consen 88 SFIFMSEDAL-TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAV-AEGYGVIVLNPN----RERKFYEK 161 (297)
T ss_pred ceEEEChhHh-cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHH-HcCCcEEEeCCc----hhhhhhhc
Confidence 3455555432 3445589999996322111 01 112233333 469999998854 22334432
Q ss_pred cccc--cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc
Q psy4818 540 GRLL--KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 592 (734)
Q Consensus 540 ~~~~--~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 592 (734)
-+.. .-...++-+..+-.+++.. ..+..+.++.||+||++++-++.++|+.
T Consensus 162 k~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 162 KRNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred ccCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 1111 1113344555555555533 5677899999999999999999999874
No 362
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.57 E-value=1.4 Score=47.09 Aligned_cols=243 Identities=13% Similarity=0.097 Sum_probs=133.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
.......|+|..+........ ++.+.+......... ..+.....+.+.+++++.+|....+.
T Consensus 33 ~~~v~~~~~g~~~~v~~~~~~----~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~------------- 95 (381)
T COG3391 33 PGGVAVNPDGTQVYVANSGSN----DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDS------------- 95 (381)
T ss_pred CceeEEcCccCEEEEEeecCc----eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCC-------------
Confidence 346788999988776654332 566666552222111 11112235678888998887665421
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
..|...+..+... +....-.. .-.+++++|||+.+++..... ..+.+.++|..++. .......+
T Consensus 96 --~~v~vid~~~~~~----~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~~--------~~~~~~vG 159 (381)
T COG3391 96 --NTVSVIDTATNTV----LGSIPVGL-GPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATNK--------VTATIPVG 159 (381)
T ss_pred --CeEEEEcCcccce----eeEeeecc-CCceEEECCCCCEEEEEeccc-CCceEEEEeCCCCe--------EEEEEecC
Confidence 2566666443321 11111000 224689999999998765432 34788999988721 11112222
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE-----eecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 303 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT-----LIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 303 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
.......++|+|..+|... .....|..+|.++.. ... ..... .....-....++.++|+....+....
T Consensus 160 ~~P~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~---v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~ 232 (381)
T COG3391 160 NTPTGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNS---VVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNN 232 (381)
T ss_pred CCcceEEECCCCCeEEEEe---cCCCeEEEEeCCCcc---eeccccccccccC-CCCceEEECCCCCEEEEEeccCCCce
Confidence 2222234899999888754 234569999976543 111 11111 11111122234456666655443357
Q ss_pred EEEEECCCCceeee-eCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHS-FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~-l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+|..++..... +....+....+..+|+++.+++..+. ...++.+|.
T Consensus 233 v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~ 282 (381)
T COG3391 233 VLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDG 282 (381)
T ss_pred EEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC---CCeEEEEeC
Confidence 88899877765332 22222123356677888877766544 567899988
No 363
>KOG0303|consensus
Probab=96.57 E-value=0.04 Score=55.67 Aligned_cols=165 Identities=10% Similarity=0.042 Sum_probs=95.5
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
++.-.++-+.|.|--.-+.++.. + .+++.+||+.||+.+..........+..|+-||..|+-+..|.
T Consensus 129 gH~rrVg~V~wHPtA~NVLlsag--~--Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDK--------- 195 (472)
T KOG0303|consen 129 GHQRRVGLVQWHPTAPNVLLSAG--S--DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDK--------- 195 (472)
T ss_pred ecceeEEEEeecccchhhHhhcc--C--CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccc---------
Confidence 44566888999998877776552 2 2799999999999643322333447899999998887766443
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCe-eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS-LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~-~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
+|.+++..++. ++.+...+.+ -...+.|-.+|+ |+-+.-+.....++-+||..... +.....
T Consensus 196 -------kvRv~dpr~~~----~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~-----eP~~~~ 258 (472)
T KOG0303|consen 196 -------KVRVIDPRRGT----VVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLE-----EPIALQ 258 (472)
T ss_pred -------eeEEEcCCCCc----EeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCccccc-----CcceeE
Confidence 68888776653 3333321111 112456777888 55443333333678888876621 112222
Q ss_pred eeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 298 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 298 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
.+-.....-.+++.+|.+.+|+...- +..|-.+.+.
T Consensus 259 elDtSnGvl~PFyD~dt~ivYl~GKG---D~~IRYyEit 294 (472)
T KOG0303|consen 259 ELDTSNGVLLPFYDPDTSIVYLCGKG---DSSIRYFEIT 294 (472)
T ss_pred EeccCCceEEeeecCCCCEEEEEecC---CcceEEEEec
Confidence 22221122233478887766665432 2335555543
No 364
>KOG2110|consensus
Probab=96.56 E-value=0.042 Score=55.15 Aligned_cols=120 Identities=12% Similarity=0.036 Sum_probs=75.8
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..++-.+++++.+.+|||-.+.. ..+|+++|+.+-+.+.. .........++|||||..|+-.+..
T Consensus 129 ~~gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeK----------- 194 (391)
T KOG2110|consen 129 PKGLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEK----------- 194 (391)
T ss_pred ccceEeeccCCCCceEEecCCCC---CceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccC-----------
Confidence 34567788888888999986654 25799999877654321 1222233678999999988876642
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
..-|+++.+.+++ .+.-|...--+..+.+++||||+.+|..+++. ..|+++.++.
T Consensus 195 ----GTVIRVf~v~~G~--kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T----eTVHiFKL~~ 249 (391)
T KOG2110|consen 195 ----GTVIRVFSVPEGQ--KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT----ETVHIFKLEK 249 (391)
T ss_pred ----ceEEEEEEcCCcc--EeeeeeCCceeeEEEEEEECCCCCeEEEecCC----CeEEEEEecc
Confidence 1235555554443 22222222123456789999999999865432 4677777765
No 365
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.55 E-value=0.075 Score=50.99 Aligned_cols=147 Identities=17% Similarity=0.169 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcc-hhccccccccCcccccccCCC
Q psy4818 552 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGAL-DMLRFNKFTIAYYSESEFGSP 624 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~-d~~~~~~~~~~~~~~~~~g~~ 624 (734)
+..++.+|.++..+ .++-++||||||......+..+ |.+-+-+.+..|+- ..+.... +.... ....|
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de-~v~~v---~~~~~ 195 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDE-TVTDV---LKDGP 195 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCc-chhee---eccCc
Confidence 45678888887544 4789999999999888887653 55545555555544 0111000 00000 01111
Q ss_pred --CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCC------CCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEe
Q psy4818 625 --NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH------DDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 696 (734)
Q Consensus 625 --~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~------D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 696 (734)
.....++++... +..+.. ++. +|++.|+- |.+||...++..+.-+... ++.+.-.+|
T Consensus 196 ~~~~t~y~~y~~~n--~k~v~~---~~e---vl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~-------~ksy~e~~~ 260 (288)
T COG4814 196 GLIKTPYYDYIAKN--YKKVSP---NTE---VLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKN-------GKSYIESLY 260 (288)
T ss_pred cccCcHHHHHHHhc--ceeCCC---CcE---EEEEecccccCCcCCCceechHhHHHHHHhccC-------cceeEEEee
Confidence 111122222211 111221 122 89999874 6799999998888877766 666554445
Q ss_pred CC--CCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 697 QD--AGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 697 ~~--~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+| +-|.-..... .....+..||-
T Consensus 261 ~Gk~a~Hs~lhen~---~v~~yv~~FLw 285 (288)
T COG4814 261 KGKDARHSKLHENP---TVAKYVKNFLW 285 (288)
T ss_pred eCCcchhhccCCCh---hHHHHHHHHhh
Confidence 44 6776543322 33444566654
No 366
>KOG0646|consensus
Probab=96.49 E-value=0.11 Score=53.69 Aligned_cols=176 Identities=14% Similarity=0.184 Sum_probs=96.3
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
.|.+|.+....... .-.--++-+..+.-+|+|.||+-. +-...||+|.+.+|. -+..+..+...
T Consensus 62 ~l~vw~i~k~~~~~----q~~v~Pg~v~al~s~n~G~~l~ag----~i~g~lYlWelssG~--------LL~v~~aHYQ~ 125 (476)
T KOG0646|consen 62 LLHVWEILKKDQVV----QYIVLPGPVHALASSNLGYFLLAG----TISGNLYLWELSSGI--------LLNVLSAHYQS 125 (476)
T ss_pred cccccccCchhhhh----hhcccccceeeeecCCCceEEEee----cccCcEEEEEecccc--------HHHHHHhhccc
Confidence 67777776543211 111113345567889999999842 223689999999942 11112223333
Q ss_pred eEEE-EEecCCeEEEEeCCCCCCceEEEEecCC---CCCC-Cc--eEeecCCCCceeEEEEEeeC--CEEEEEEEeCCce
Q psy4818 306 HHEI-IANNGPELIVKTTKNAPKGKVVTINLNN---PCEK-NW--KTLIPEDENRTLDVVAAVAN--NKLIVHYIQNVRS 376 (734)
Q Consensus 306 ~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~---~~~~-~~--~~l~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~ 376 (734)
.... |+-||..|+ .+.. ++.+..|.+.. .... .. ...+.+. .-.+.++....+ +..+++++.| .
T Consensus 126 ITcL~fs~dgs~ii-Tgsk---Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~H-tlsITDl~ig~Gg~~~rl~TaS~D--~ 198 (476)
T KOG0646|consen 126 ITCLKFSDDGSHII-TGSK---DGAVLVWLLTDLVSADNDHSVKPLHIFSDH-TLSITDLQIGSGGTNARLYTASED--R 198 (476)
T ss_pred eeEEEEeCCCcEEE-ecCC---CccEEEEEEEeecccccCCCccceeeeccC-cceeEEEEecCCCccceEEEecCC--c
Confidence 3333 787777555 3322 34466655422 1100 00 1111111 223344444332 2345555555 5
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+.+||+..|..+..+.+| ..+.++..+|.+..+|+..+ -+.+|..++
T Consensus 199 t~k~wdlS~g~LLlti~fp-~si~av~lDpae~~~yiGt~----~G~I~~~~~ 246 (476)
T KOG0646|consen 199 TIKLWDLSLGVLLLTITFP-SSIKAVALDPAERVVYIGTE----EGKIFQNLL 246 (476)
T ss_pred eEEEEEeccceeeEEEecC-CcceeEEEcccccEEEecCC----cceEEeeeh
Confidence 7888999888888788776 34667778888777766543 246888877
No 367
>KOG4499|consensus
Probab=96.48 E-value=0.7 Score=43.86 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=79.3
Q ss_pred EEEEecCCcEEEEEEecCCC-----CceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCC
Q psy4818 254 HSEVTDCGRYLLVSTSNNTQ-----GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPK 327 (734)
Q Consensus 254 ~~~~SpDG~~l~~~~~~~~~-----~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~ 327 (734)
+...+|||||.+=+-..... ...+|.|-+.. .+..+......... .|+.|-+.+|++-. .+
T Consensus 113 DgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h----------~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs---ln 179 (310)
T KOG4499|consen 113 DGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH----------QVELIWNCVGISNGLAWDSDAKKFYYIDS---LN 179 (310)
T ss_pred cCccCCCCceeeeeeccccccccccccEEEEeccCC----------CceeeehhccCCccccccccCcEEEEEcc---Cc
Confidence 45789999994322111111 15777776655 11222222111112 38888888888643 35
Q ss_pred ceE--EEEecCCCCCCCceEeecCCC-----CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEE
Q psy4818 328 GKV--VTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQIT 400 (734)
Q Consensus 328 ~~l--~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~ 400 (734)
+.+ |-+|..++...+-+.++.-.. .....++.+..++.|++..-.. ..++.+|+.+|+.+.++.+|.-.++
T Consensus 180 ~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng--~~V~~~dp~tGK~L~eiklPt~qit 257 (310)
T KOG4499|consen 180 YEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNG--GTVQKVDPTTGKILLEIKLPTPQIT 257 (310)
T ss_pred eEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecC--cEEEEECCCCCcEEEEEEcCCCceE
Confidence 667 555577765433333332211 1111233334446666665444 5799999999999999888855565
Q ss_pred eeccC-cccceEEEEE
Q psy4818 401 HISGR-RKYNEVFYGF 415 (734)
Q Consensus 401 ~~~~~-~d~~~l~~~~ 415 (734)
+.++- ++-+.++++.
T Consensus 258 sccFgGkn~d~~yvT~ 273 (310)
T KOG4499|consen 258 SCCFGGKNLDILYVTT 273 (310)
T ss_pred EEEecCCCccEEEEEe
Confidence 54443 2234455444
No 368
>KOG0771|consensus
Probab=96.48 E-value=0.06 Score=54.93 Aligned_cols=183 Identities=10% Similarity=0.098 Sum_probs=94.9
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
..+++++||..|+-...|. .+++++.-... ++.++..+..-+-++.|||||+.|+....+
T Consensus 148 k~vaf~~~gs~latgg~dg----------------~lRv~~~Ps~~----t~l~e~~~~~eV~DL~FS~dgk~lasig~d 207 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDG----------------TLRVWEWPSML----TILEEIAHHAEVKDLDFSPDGKFLASIGAD 207 (398)
T ss_pred eEEEEcCCCCEeeeccccc----------------eEEEEecCcch----hhhhhHhhcCccccceeCCCCcEEEEecCC
Confidence 4578888888777665432 45555543221 223333333345678999999999976432
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceE--E--EEEecC--CeEEEEeCCCCCCceEEEEecCC--C-CCC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH--E--IIANNG--PELIVKTTKNAPKGKVVTINLNN--P-CEK 341 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~--~--~~s~dg--~~l~~~s~~~~~~~~l~~~d~~~--~-~~~ 341 (734)
...+|++.+|. .+..+.. +...+ . .|+.|+ ..+++.+... +...+..+++.. + ..-
T Consensus 208 -----~~~VW~~~~g~--------~~a~~t~-~~k~~~~~~cRF~~d~~~~~l~laa~~~-~~~~v~~~~~~~w~~~~~l 272 (398)
T KOG0771|consen 208 -----SARVWSVNTGA--------ALARKTP-FSKDEMFSSCRFSVDNAQETLRLAASQF-PGGGVRLCDISLWSGSNFL 272 (398)
T ss_pred -----ceEEEEeccCc--------hhhhcCC-cccchhhhhceecccCCCceEEEEEecC-CCCceeEEEeeeecccccc
Confidence 56778888741 2222221 12111 1 255554 3454444432 222244444322 1 100
Q ss_pred CceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-CCceEEeeccCcccceEE
Q psy4818 342 NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITHISGRRKYNEVF 412 (734)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~-~~g~v~~~~~~~d~~~l~ 412 (734)
+++..+.. ...+..+...+++++++....+| .+-+++..+=+.++-++- +.+.|+++.++||.+.+.
T Consensus 273 ~~~~~~~~--~~siSsl~VS~dGkf~AlGT~dG--sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~ 340 (398)
T KOG0771|consen 273 RLRKKIKR--FKSISSLAVSDDGKFLALGTMDG--SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLA 340 (398)
T ss_pred chhhhhhc--cCcceeEEEcCCCcEEEEeccCC--cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCccc
Confidence 12222222 34566666666677776666554 455666533333333322 256788899999876554
No 369
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.48 E-value=0.069 Score=53.09 Aligned_cols=63 Identities=14% Similarity=0.042 Sum_probs=50.6
Q ss_pred ccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHH
Q psy4818 649 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVF 720 (734)
Q Consensus 649 ~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 720 (734)
..+| -|.+.+..|..|+..+.+++++..++. |.++....+.+++|...-..+. .+.+..+.+|
T Consensus 177 ~~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~-------G~~V~~~~f~~S~HV~H~r~~p-~~Y~~~v~~f 239 (240)
T PF05705_consen 177 SRCP-RLYLYSKADPLIPWRDVEEHAEEARRK-------GWDVRAEKFEDSPHVAHLRKHP-DRYWRAVDEF 239 (240)
T ss_pred CCCC-eEEecCCCCcCcCHHHHHHHHHHHHHc-------CCeEEEecCCCCchhhhcccCH-HHHHHHHHhh
Confidence 4556 899999999999999999999999998 9999999999999976543332 4555555555
No 370
>KOG2919|consensus
Probab=96.45 E-value=0.15 Score=50.30 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=74.0
Q ss_pred ceEEEEeCCCCCCCcccCCCCcee--eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC--CCCceEeecC
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKT--VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC--EKNWKTLIPE 349 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~--l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~~~l~~~ 349 (734)
.-|.+||.-+|+.+. ..+. -.+........ |+|||..|+- +.+..|.++|+.-+. ......++..
T Consensus 133 ~PIh~wdaftG~lra-----Sy~~ydh~de~taAhsL~Fs~DGeqlfa-----GykrcirvFdt~RpGr~c~vy~t~~~~ 202 (406)
T KOG2919|consen 133 QPIHLWDAFTGKLRA-----SYRAYDHQDEYTAAHSLQFSPDGEQLFA-----GYKRCIRVFDTSRPGRDCPVYTTVTKG 202 (406)
T ss_pred Cceeeeecccccccc-----chhhhhhHHhhhhheeEEecCCCCeEee-----cccceEEEeeccCCCCCCcchhhhhcc
Confidence 568999988854221 0010 01111122333 9999999883 334457777774322 1122333332
Q ss_pred CCC--ceeEEEE-EeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEE
Q psy4818 350 DEN--RTLDVVA-AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 426 (734)
Q Consensus 350 ~~~--~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~ 426 (734)
... ..+.-+. .+.+...+........--||.++ .+..+..+-...|.|+.+.+.+++++++ ++...-..|..
T Consensus 203 k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~--~~~pl~llggh~gGvThL~~~edGn~lf---sGaRk~dkIl~ 277 (406)
T KOG2919|consen 203 KFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD--GRRPLQLLGGHGGGVTHLQWCEDGNKLF---SGARKDDKILC 277 (406)
T ss_pred cccccceeeeeeccCCCCcceeeecccceeeeEecC--CCCceeeecccCCCeeeEEeccCcCeec---ccccCCCeEEE
Confidence 211 2222222 22223445444333223455543 4555566665577888899999998775 45555567888
Q ss_pred EeC
Q psy4818 427 CNI 429 (734)
Q Consensus 427 ~d~ 429 (734)
+|+
T Consensus 278 WDi 280 (406)
T KOG2919|consen 278 WDI 280 (406)
T ss_pred Eee
Confidence 888
No 371
>KOG4378|consensus
Probab=96.45 E-value=0.17 Score=52.86 Aligned_cols=115 Identities=16% Similarity=0.256 Sum_probs=83.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc--ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP--EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~--~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.++.-+.+||.-|.+.-+...+| .+.+||+.+..+.- .......-.+++|||-...|+.+.-
T Consensus 165 qsvRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG------------ 228 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVG------------ 228 (673)
T ss_pred CeEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEec------------
Confidence 34567899999999988877665 69999998765432 1122222268999998876665542
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
...+|+.++++.....+.++++.| +..++|+++|.+|+.- ....+|+.||+..
T Consensus 229 ---~Dkki~~yD~~s~~s~~~l~y~~P-----lstvaf~~~G~~L~aG----~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 229 ---YDKKINIYDIRSQASTDRLTYSHP-----LSTVAFSECGTYLCAG----NSKGELIAYDMRS 281 (673)
T ss_pred ---ccceEEEeecccccccceeeecCC-----cceeeecCCceEEEee----cCCceEEEEeccc
Confidence 334899999998887788887754 3468999999999853 3336899999987
No 372
>KOG0307|consensus
Probab=96.41 E-value=0.025 Score=64.74 Aligned_cols=166 Identities=16% Similarity=0.146 Sum_probs=102.1
Q ss_pred cEEEeeEEeCCCCc-EEEEEEeCCCCceEEEEEEECCCCCcccccc----cccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 141 TTALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 141 ~~~~~~~~~SPDG~-~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
+..|.++.|+|.+. .|| +|....+|++||+..=+ .+-+. ....+..++|...-..|+-.....
T Consensus 116 ~G~V~gLDfN~~q~nlLA-----SGa~~geI~iWDlnn~~-tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~s------ 183 (1049)
T KOG0307|consen 116 TGPVLGLDFNPFQGNLLA-----SGADDGEILIWDLNKPE-TPFTPGSQAPPSEIKCLSWNRKVSHILASGSPS------ 183 (1049)
T ss_pred CCceeeeeccccCCceee-----ccCCCCcEEEeccCCcC-CCCCCCCCCCcccceEeccchhhhHHhhccCCC------
Confidence 55688899999988 777 45556789999987522 11111 111235678866665665544321
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.+.-+||+.... .++-+...........+.|.||+..-+++++......-|-+||+.- . ..+
T Consensus 184 ---------g~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~-a------ssP 245 (1049)
T KOG0307|consen 184 ---------GRAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF-A------SSP 245 (1049)
T ss_pred ---------CCceeccccCCC--cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccc-c------CCc
Confidence 245667776542 2222222222234567999999987776666545557888899765 1 134
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
.+.+..+..+.... |.+.+.++++.+.+ +.+++.++.++++
T Consensus 246 ~k~~~~H~~GilslsWc~~D~~lllSsgk---D~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 246 LKILEGHQRGILSLSWCPQDPRLLLSSGK---DNRIICWNPNTGE 287 (1049)
T ss_pred hhhhcccccceeeeccCCCCchhhhcccC---CCCeeEecCCCce
Confidence 44443444444444 88888778876654 4579999998865
No 373
>KOG0264|consensus
Probab=96.37 E-value=0.19 Score=51.86 Aligned_cols=202 Identities=13% Similarity=0.182 Sum_probs=114.3
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc----c-cccc---cccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD----Y-PEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~----~-~~~~---~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
+++|++.-.-...+ +++..+|.+||+..... + +.+. ....+...+|.|-.+.+|-...++
T Consensus 182 glsWn~~~~g~Lls----~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd-------- 249 (422)
T KOG0264|consen 182 GLSWNRQQEGTLLS----GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD-------- 249 (422)
T ss_pred ccccccccceeEee----ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC--------
Confidence 46777765543333 33446799999875332 1 1111 111235678988777776554432
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
..|.+|++.+.+.+ .......+..-+..++|+|=+.+|+.+.+. .+.|.+||+.... .++.
T Consensus 250 -------~~L~iwD~R~~~~~--~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~---D~tV~LwDlRnL~-------~~lh 310 (422)
T KOG0264|consen 250 -------GKLMIWDTRSNTSK--PSHSVKAHSAEVNCVAFNPFNEFILATGSA---DKTVALWDLRNLN-------KPLH 310 (422)
T ss_pred -------CeEEEEEcCCCCCC--CcccccccCCceeEEEeCCCCCceEEeccC---CCcEEEeechhcc-------cCce
Confidence 37889998863211 111122233345678999999888866542 3689999998721 2344
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC---------CceEeecCC-CCceeEEEEEee-CCE
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK---------NWKTLIPED-ENRTLDVVAAVA-NNK 365 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~---------~~~~l~~~~-~~~~~~~~~~~~-~~~ 365 (734)
.+.........+ |||+.+.++..+. .+.+|.+||+..-... ....++.+. ....+..+.|.. ...
T Consensus 311 ~~e~H~dev~~V~WSPh~etvLASSg---~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW 387 (422)
T KOG0264|consen 311 TFEGHEDEVFQVEWSPHNETVLASSG---TDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPW 387 (422)
T ss_pred eccCCCcceEEEEeCCCCCceeEecc---cCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCe
Confidence 444555555666 9999888876654 3567999998642211 112223222 222234444433 245
Q ss_pred EEEEEEeCCceeEEEEEC
Q psy4818 366 LIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl 383 (734)
++.+..++ ..|.+|..
T Consensus 388 ~I~SvaeD--N~LqIW~~ 403 (422)
T KOG0264|consen 388 TIASVAED--NILQIWQM 403 (422)
T ss_pred EEEEecCC--ceEEEeec
Confidence 66666666 45556655
No 374
>KOG0277|consensus
Probab=96.37 E-value=0.86 Score=43.76 Aligned_cols=204 Identities=10% Similarity=0.099 Sum_probs=113.1
Q ss_pred CeeEEEc--CCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-CCeeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy4818 191 PSISWTH--DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 267 (734)
Q Consensus 191 ~~~~wSp--Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~ 267 (734)
.++.||| ++ +|+..+...- -.....+|+++++..++. ....-|+..+ -.++++||+.-..+++.
T Consensus 12 ysvqfSPf~~n-rLavAt~q~y---------Gl~G~G~L~ile~~~~~gi~e~~s~d~~D---~LfdV~Wse~~e~~~~~ 78 (311)
T KOG0277|consen 12 YSVQFSPFVEN-RLAVATAQHY---------GLAGNGRLFILEVTDPKGIQECQSYDTED---GLFDVAWSENHENQVIA 78 (311)
T ss_pred ceeEecccccc-hhheeehhhc---------ccccCceEEEEecCCCCCeEEEEeeeccc---ceeEeeecCCCcceEEE
Confidence 4677777 33 4554442110 123455899999863332 2122233222 34589999999888887
Q ss_pred EecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 346 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 346 (734)
.... ..+.++|+.- + ..|......+....+.. |.+-.++.++++.- +..|-+++..-+. .+...
T Consensus 79 a~GD---GSLrl~d~~~-~------s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSW---D~TiKLW~~~r~~--Sv~Tf 143 (311)
T KOG0277|consen 79 ASGD---GSLRLFDLTM-P------SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSW---DGTIKLWDPNRPN--SVQTF 143 (311)
T ss_pred EecC---ceEEEeccCC-C------CcchhHHHhhhhheEEeccccccceeEEeecc---CCceEeecCCCCc--ceEee
Confidence 6532 4678888544 2 23444343444455554 66655666666533 3346666654333 23443
Q ss_pred ecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECC-CCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEE
Q psy4818 347 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-TGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 425 (734)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~-~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~ 425 (734)
. +....+++..+.+....++.+.+.++ .+.+||+. .|+.+ .|..+...+....++.-...++++.... ..++
T Consensus 144 ~-gh~~~Iy~a~~sp~~~nlfas~Sgd~--~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd---~~vr 216 (311)
T KOG0277|consen 144 N-GHNSCIYQAAFSPHIPNLFASASGDG--TLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVLATGGVD---NLVR 216 (311)
T ss_pred c-CCccEEEEEecCCCCCCeEEEccCCc--eEEEEEecCCCcee-EEEeccceeEeecccccCCcEEEecCCC---ceEE
Confidence 3 33345556555555456777776664 56666663 46653 3655555555666665555666655443 3688
Q ss_pred EEeC
Q psy4818 426 HCNI 429 (734)
Q Consensus 426 ~~d~ 429 (734)
.+|+
T Consensus 217 ~wDi 220 (311)
T KOG0277|consen 217 GWDI 220 (311)
T ss_pred EEeh
Confidence 8888
No 375
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.30 E-value=0.34 Score=47.82 Aligned_cols=208 Identities=11% Similarity=0.067 Sum_probs=100.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
+++++|.||.+.|+.+.+.. ..|+.++++ |+.+.. ...+ .+.-++++.-+++ ++ .+.
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~----~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~-~v-l~~-------------- 82 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEP----GEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGR-YV-LSE-------------- 82 (248)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETT---EEEEEE-SS-SSEEEEEE-STTE-EE-EEE--------------
T ss_pred ccccEEcCCCCeEEEEECCC----CEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCE-EE-EEE--------------
Confidence 89999999999888777654 368899975 565432 2222 2346788876663 32 232
Q ss_pred cCCcEEEEEECCCCCCC-Ce---eEEe--cC-CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCC-cccCC
Q psy4818 222 HMGQKIYYHVLGTEQDK-DI---PVVE--FP-NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KISGK 293 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~-~~---~v~~--~~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~ 293 (734)
.+.++|+.+.++..... +. .-+. .. .+..-+.+++|+|.++.+++...+ ....||-++....... .+...
T Consensus 83 Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~--~P~~l~~~~~~~~~~~~~~~~~ 160 (248)
T PF06977_consen 83 ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER--KPKRLYEVNGFPGGFDLFVSDD 160 (248)
T ss_dssp TTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES--SSEEEEEEESTT-SS--EEEE-
T ss_pred cCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC--CChhhEEEccccCccceeeccc
Confidence 22447888877443211 11 1111 11 112235789999998888766432 3357888876220000 00000
Q ss_pred CCcee-eeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-----CCceeEEEEEeeCCEEE
Q psy4818 294 FPLKT-VIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-----ENRTLDVVAAVANNKLI 367 (734)
Q Consensus 294 ~~~~~-l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~l~ 367 (734)
..+.. ...-.+...-.+.|..+.||+++... ..|..+|.++.. .....|.... .-...+++.+.+++.||
T Consensus 161 ~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es---~~l~~~d~~G~~-~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LY 236 (248)
T PF06977_consen 161 QDLDDDKLFVRDLSGLSYDPRTGHLLILSDES---RLLLELDRQGRV-VSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLY 236 (248)
T ss_dssp HHHH-HT--SS---EEEEETTTTEEEEEETTT---TEEEEE-TT--E-EEEEE-STTGGG-SS---SEEEEEE-TT--EE
T ss_pred cccccccceeccccceEEcCCCCeEEEEECCC---CeEEEECCCCCE-EEEEEeCCcccCcccccCCccEEEECCCCCEE
Confidence 00000 00000111112678888999998863 468888865532 1122233321 01235677777767888
Q ss_pred EEEEeCCceeEEEE
Q psy4818 368 VHYIQNVRSVMDLH 381 (734)
Q Consensus 368 ~~~~~~~~~~l~~~ 381 (734)
++... +.+|++
T Consensus 237 IvsEp---Nlfy~f 247 (248)
T PF06977_consen 237 IVSEP---NLFYRF 247 (248)
T ss_dssp EEETT---TEEEEE
T ss_pred EEcCC---ceEEEe
Confidence 77643 356655
No 376
>KOG2931|consensus
Probab=96.30 E-value=0.39 Score=47.32 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=81.0
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc---CCccc-cHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTF-SISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~-~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
+++..+.+.-|. |++.++-- +++++|+||..|.-.-.. ....| .+.++.++. .|.|.-++.+|.-.--.
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeecccccc-EEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCc
Confidence 444445555563 77777642 234788899988742221 22223 234455544 39999999998432111
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.+. ...---+.+|+.+.+-.+.+. ..-+.|..+|--+|+++-.+.|..+|++.-+.|+..+
T Consensus 95 ~~p----~~y~yPsmd~LAd~l~~VL~~--f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 95 SFP----EGYPYPSMDDLADMLPEVLDH--FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred cCC----CCCCCCCHHHHHHHHHHHHHh--cCcceEEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 111 111123456666666666554 2335689999999999999999999999999998765
No 377
>KOG2394|consensus
Probab=96.25 E-value=0.3 Score=51.62 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=67.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.++..+.|-|-++.+.......|. +|++|.. ...+.......--+++..+.....-.. .
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGn----lyly~~~-------~~~~~t~p~~~~~k~~~~f~i~t~ksk----------~ 278 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGN----LYLYDKE-------IVCGATAPSYQALKDGDQFAILTSKSK----------K 278 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCc----eEEeecc-------ccccCCCCcccccCCCCeeEEeeeecc----------c
Confidence 456677888776666555555553 7777751 111111111222356665555433110 0
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.+ .-+.+|.++.+ -+..++|||||++||.++.+ .-|.++|..+ ..+..+..
T Consensus 279 ~r-NPv~~w~~~~g---------------~in~f~FS~DG~~LA~VSqD----GfLRvF~fdt---------~eLlg~mk 329 (636)
T KOG2394|consen 279 TR-NPVARWHIGEG---------------SINEFAFSPDGKYLATVSQD----GFLRIFDFDT---------QELLGVMK 329 (636)
T ss_pred cC-CccceeEeccc---------------cccceeEcCCCceEEEEecC----ceEEEeeccH---------HHHHHHHH
Confidence 11 22444444433 12357899999999987654 3577777776 11222222
Q ss_pred cccce-EEE-EEecCCeEEE
Q psy4818 302 GMDHH-HEI-IANNGPELIV 319 (734)
Q Consensus 302 ~~~~~-~~~-~s~dg~~l~~ 319 (734)
..-.+ ..+ |||||++|+.
T Consensus 330 SYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 330 SYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred hhccceEEEEEcCCccEEEe
Confidence 22222 334 9999998774
No 378
>KOG0274|consensus
Probab=96.25 E-value=0.49 Score=52.49 Aligned_cols=230 Identities=10% Similarity=0.069 Sum_probs=121.4
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
...+..+.+.- |..+.++- +...+++|||..+|+.+....+... ..-.-+-+. .+....
T Consensus 249 ~g~V~~l~~~~-~~~~lvsg----S~D~t~rvWd~~sg~C~~~l~gh~s-tv~~~~~~~-~~~~sg-------------- 307 (537)
T KOG0274|consen 249 FGGVWGLAFPS-GGDKLVSG----STDKTERVWDCSTGECTHSLQGHTS-SVRCLTIDP-FLLVSG-------------- 307 (537)
T ss_pred CCCceeEEEec-CCCEEEEE----ecCCcEEeEecCCCcEEEEecCCCc-eEEEEEccC-ceEeec--------------
Confidence 34455566555 33344433 3346899999999997543332221 222222222 222221
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+...|.+|++.++. .+.++... ...+..+..+ +..++-.+. ...|.+||..++ ..+..+.
T Consensus 308 -s~D~tVkVW~v~n~~--~l~l~~~h--~~~V~~v~~~--~~~lvsgs~----d~~v~VW~~~~~--------~cl~sl~ 368 (537)
T KOG0274|consen 308 -SRDNTVKVWDVTNGA--CLNLLRGH--TGPVNCVQLD--EPLLVSGSY----DGTVKVWDPRTG--------KCLKSLS 368 (537)
T ss_pred -cCCceEEEEeccCcc--eEEEeccc--cccEEEEEec--CCEEEEEec----CceEEEEEhhhc--------eeeeeec
Confidence 133478999988653 44444432 2233344443 666653322 247888998873 1223333
Q ss_pred ccccceEEEEEecC-CeEEEEeCCCCCCceEEEEecCCC-CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 301 PGMDHHHEIIANNG-PELIVKTTKNAPKGKVVTINLNNP-CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 301 ~~~~~~~~~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
.+....+. +..++ ..++ .+.. +..|..||+.++ . ....+.+. ...+...... +.+++....+ ..|
T Consensus 369 gH~~~V~s-l~~~~~~~~~-Sgs~---D~~IkvWdl~~~~~---c~~tl~~h-~~~v~~l~~~--~~~Lvs~~aD--~~I 435 (537)
T KOG0274|consen 369 GHTGRVYS-LIVDSENRLL-SGSL---DTTIKVWDLRTKRK---CIHTLQGH-TSLVSSLLLR--DNFLVSSSAD--GTI 435 (537)
T ss_pred CCcceEEE-EEecCcceEE-eeee---ccceEeecCCchhh---hhhhhcCC-cccccccccc--cceeEecccc--ccE
Confidence 32222222 34444 4444 3222 355999999876 3 23333332 2333333322 3455555544 489
Q ss_pred EEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 379 DLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 379 ~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+||.++++.++.+..+ .+.+..+... +..++..+. ...+.++|+
T Consensus 436 k~WD~~~~~~~~~~~~~~~~~v~~l~~~---~~~il~s~~---~~~~~l~dl 481 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLEGRHVGGVSALALG---KEEILCSSD---DGSVKLWDL 481 (537)
T ss_pred EEeecccCceeeeeccCCcccEEEeecC---cceEEEEec---CCeeEEEec
Confidence 99999999988888774 5667666544 334444333 346788898
No 379
>KOG0288|consensus
Probab=96.21 E-value=0.12 Score=52.56 Aligned_cols=219 Identities=13% Similarity=0.120 Sum_probs=111.8
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+....+-+|++.+.-.... ..+++|++..++.+. .+..........+.-+..+++-.+.
T Consensus 221 ~it~~d~d~~~~~~iAas~d-----~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~-------------- 281 (459)
T KOG0288|consen 221 NITSIDFDSDNKHVIAASND-----KNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSA-------------- 281 (459)
T ss_pred CcceeeecCCCceEEeecCC-----Cceeeeeccchhhhhhhcccccceeeehhhccccceeeccc--------------
Confidence 36678899999986644322 468899998876432 2222222345555554444322222
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
..+|..|++....-....+.....+ ++..+ -..+++ .+.+ ..|..||..+.. ....+.
T Consensus 282 --DRtiK~WDl~k~~C~kt~l~~S~cn-----DI~~~---~~~~~S--gH~D-kkvRfwD~Rs~~---------~~~sv~ 339 (459)
T KOG0288|consen 282 --DRTIKLWDLQKAYCSKTVLPGSQCN-----DIVCS---ISDVIS--GHFD-KKVRFWDIRSAD---------KTRSVP 339 (459)
T ss_pred --cchhhhhhhhhhheecccccccccc-----ceEec---ceeeee--cccc-cceEEEeccCCc---------eeeEee
Confidence 2356666665433222122221111 22332 122222 2222 568999977621 111111
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC----CceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE----NRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
........ .+++|..+.-.+.. ..|-++|+.+.+ +...+.... .+.-..++.++ +..++..+.+ .
T Consensus 340 ~gg~vtSl~ls~~g~~lLsssRD----dtl~viDlRt~e---I~~~~sA~g~k~asDwtrvvfSpd-~~YvaAGS~d--g 409 (459)
T KOG0288|consen 340 LGGRVTSLDLSMDGLELLSSSRD----DTLKVIDLRTKE---IRQTFSAEGFKCASDWTRVVFSPD-GSYVAAGSAD--G 409 (459)
T ss_pred cCcceeeEeeccCCeEEeeecCC----Cceeeeeccccc---EEEEeeccccccccccceeEECCC-CceeeeccCC--C
Confidence 11122222 77888777654332 347778887755 232222210 11112233344 5555555444 4
Q ss_pred eEEEEECCCCceeeeeCCC--CceEEeeccCcccceEE
Q psy4818 377 VMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVF 412 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~ 412 (734)
.||+|++.+|+....+..+ ...|.++++++.|..++
T Consensus 410 sv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Ll 447 (459)
T KOG0288|consen 410 SVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLL 447 (459)
T ss_pred cEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhh
Confidence 7999999999877777655 22477788877665443
No 380
>KOG1539|consensus
Probab=96.19 E-value=0.017 Score=63.73 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=48.7
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEec
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCD 209 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~ 209 (734)
+...+..+.||||||+|+-+..+ ..|++||+.+|..+.-..-.....++.+||.|+.|+-+..+.
T Consensus 575 h~nritd~~FS~DgrWlisasmD-----~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~ 639 (910)
T KOG1539|consen 575 HGNRITDMTFSPDGRWLISASMD-----STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQ 639 (910)
T ss_pred cccceeeeEeCCCCcEEEEeecC-----CcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecC
Confidence 34568899999999999976642 479999999998654222222226789999999999887653
No 381
>KOG0281|consensus
Probab=96.17 E-value=0.09 Score=52.20 Aligned_cols=192 Identities=17% Similarity=0.175 Sum_probs=106.5
Q ss_pred cCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCce
Q psy4818 197 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 276 (734)
Q Consensus 197 pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 276 (734)
-..|.+|....++.. .....+...|.+|+..+-.-..+ + ..+.+.+. ..--|.+. +++ ++..+.
T Consensus 195 e~skgVYClQYDD~k------iVSGlrDnTikiWD~n~~~c~~~-L---~GHtGSVL--CLqyd~rv-iis---GSSDsT 258 (499)
T KOG0281|consen 195 ENSKGVYCLQYDDEK------IVSGLRDNTIKIWDKNSLECLKI-L---TGHTGSVL--CLQYDERV-IVS---GSSDST 258 (499)
T ss_pred ccCCceEEEEecchh------hhcccccCceEEeccccHHHHHh-h---hcCCCcEE--eeeccceE-EEe---cCCCce
Confidence 356777777765420 11123445677777654321111 1 12233333 33346663 333 234478
Q ss_pred EEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCcee
Q psy4818 277 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 355 (734)
Q Consensus 277 i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 355 (734)
|.+||..+| .++..++.+-+..... |+ + . +.+.+.+ +..+.+||++++....+..++-+. ...+
T Consensus 259 vrvWDv~tg--------e~l~tlihHceaVLhlrf~-n-g-~mvtcSk---DrsiaVWdm~sps~it~rrVLvGH-rAaV 323 (499)
T KOG0281|consen 259 VRVWDVNTG--------EPLNTLIHHCEAVLHLRFS-N-G-YMVTCSK---DRSIAVWDMASPTDITLRRVLVGH-RAAV 323 (499)
T ss_pred EEEEeccCC--------chhhHHhhhcceeEEEEEe-C-C-EEEEecC---CceeEEEeccCchHHHHHHHHhhh-hhhe
Confidence 999999984 2344455444444333 43 2 2 3334433 345778888765432333344333 3445
Q ss_pred EEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 356 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+.+. ++++++++.+ ..|.+|+..+++.++.|......|..+.. .++++++.||.. .+.++|+
T Consensus 324 NvVdfd--~kyIVsASgD--RTikvW~~st~efvRtl~gHkRGIAClQY---r~rlvVSGSSDn---tIRlwdi 387 (499)
T KOG0281|consen 324 NVVDFD--DKYIVSASGD--RTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRLVVSGSSDN---TIRLWDI 387 (499)
T ss_pred eeeccc--cceEEEecCC--ceEEEEeccceeeehhhhcccccceehhc---cCeEEEecCCCc---eEEEEec
Confidence 555443 3455555433 67999999999988888776444534332 357888888876 5888888
No 382
>KOG0288|consensus
Probab=96.08 E-value=0.065 Score=54.50 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=61.8
Q ss_pred EEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCC
Q psy4818 168 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN 247 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~ 247 (734)
..|+.||..++..+.....+....++.-|+||..|.-...++ .+-++++.+... +..|....
T Consensus 322 kkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd----------------tl~viDlRt~eI--~~~~sA~g 383 (459)
T KOG0288|consen 322 KKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD----------------TLKVIDLRTKEI--RQTFSAEG 383 (459)
T ss_pred cceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC----------------ceeeeecccccE--EEEeeccc
Confidence 468999988877655444344568899999999888765433 466666665432 22332211
Q ss_pred --CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 248 --GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 248 --~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
.......+.|||||+|++- ++....||+|++.++
T Consensus 384 ~k~asDwtrvvfSpd~~YvaA----GS~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 384 FKCASDWTRVVFSPDGSYVAA----GSADGSVYIWSVFTG 419 (459)
T ss_pred cccccccceeEECCCCceeee----ccCCCcEEEEEccCc
Confidence 0111345789999999983 333468999999884
No 383
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.07 E-value=0.16 Score=49.20 Aligned_cols=180 Identities=13% Similarity=0.076 Sum_probs=95.7
Q ss_pred EEEEecCCCCCcCCcccc-HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCC
Q psy4818 490 VIIYGYGGYGVSVLPTFS-ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 568 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 568 (734)
.||++-||......|... ..+++.|+++||+|++.-|.-+ + +..... ....+.+..|++.|.+++..++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t--f--DH~~~A-----~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT--F--DHQAIA-----REVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC--C--cHHHHH-----HHHHHHHHHHHHHHHHhcCCCcc
Confidence 677777775544444322 2356777788999999988632 2 111111 12345677788888776544443
Q ss_pred --cEEEEEcChHHHHHHHHHhcCCCceeEEEEcC----CcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCC
Q psy4818 569 --YITIMGGSNGGLLVGACLNQRPELYGAALILV----GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 642 (734)
Q Consensus 569 --ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~----~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~ 642 (734)
.+.-+|||+|..+-+.+....+..-++-|+.+ |..+.+-+.. ........|| .|.-.|....++++ ..+
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~-~l~~~l~~EF-~PsP~ET~~li~~~---Y~~ 163 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLE-QLAPALRLEF-TPSPEETRRLIRES---YQV 163 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHh-hhccccccCc-cCCHHHHHHHHHHh---cCC
Confidence 56779999999998887765432213222211 1111111100 0011111222 23323333333332 234
Q ss_pred CCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCC
Q psy4818 643 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 702 (734)
Q Consensus 643 ~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~ 702 (734)
+. .|++.=.+|. ..|+..+.+.|+... ..-+....-+ +.|.
T Consensus 164 ~r---------nLLIkF~~D~---iDqt~~L~~~L~~r~------~~~~~~~~L~-G~HL 204 (250)
T PF07082_consen 164 RR---------NLLIKFNDDD---IDQTDELEQILQQRF------PDMVSIQTLP-GNHL 204 (250)
T ss_pred cc---------ceEEEecCCC---ccchHHHHHHHhhhc------cccceEEeCC-CCCC
Confidence 33 6667666675 479999999998762 1124445555 5774
No 384
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.07 E-value=1.6 Score=42.77 Aligned_cols=214 Identities=13% Similarity=0.081 Sum_probs=105.3
Q ss_pred CeeEEEcCCc-EEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 191 PSISWTHDHK-GFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 191 ~~~~wSpDg~-~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
.+++++|-.+ .++|.+.+. ...++.+..+.+...+ .....+..|+..-.|||||++|+-+.+
T Consensus 71 Hgi~~~p~~~ravafARrPG---------------tf~~vfD~~~~~~pv~--~~s~~~RHfyGHGvfs~dG~~LYATEn 133 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPG---------------TFAMVFDPNGAQEPVT--LVSQEGRHFYGHGVFSPDGRLLYATEN 133 (366)
T ss_pred CCeecCCCCcceEEEEecCC---------------ceEEEECCCCCcCcEE--EecccCceeecccccCCCCcEEEeecC
Confidence 4566777544 566666533 1345556655543322 222334557777889999999987765
Q ss_pred cCCC-CceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCC--CC------------CCceEEEEe
Q psy4818 270 NNTQ-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTK--NA------------PKGKVVTIN 334 (734)
Q Consensus 270 ~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~--~~------------~~~~l~~~d 334 (734)
.-.. ..-|-++|...+-. . ...+. +-+.....-.|.+||+.+++...- .. -.-.|.++|
T Consensus 134 dfd~~rGViGvYd~r~~fq-r---vgE~~--t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld 207 (366)
T COG3490 134 DFDPNRGVIGVYDAREGFQ-R---VGEFS--THGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLD 207 (366)
T ss_pred CCCCCCceEEEEecccccc-e---ecccc--cCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEe
Confidence 4322 25677888765211 0 01111 111122222389999987765320 11 112466666
Q ss_pred cCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCc----eeEEEEECCCCceeeeeCCCC-------ceEEee
Q psy4818 335 LNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVR----SVMDLHDLNTGKRLHSFPLDL-------GQITHI 402 (734)
Q Consensus 335 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~----~~l~~~dl~~g~~~~~l~~~~-------g~v~~~ 402 (734)
..+++.-+ +..++.. ..-.+.-+....++.+++.....|. +-|.-.-. .|+.++.+..+. ..+.++
T Consensus 208 ~atG~lie-kh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~-~g~~l~~~~~pee~~~~~anYigsi 285 (366)
T COG3490 208 AATGNLIE-KHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFR-KGEPLEFLDLPEEQTAAFANYIGSI 285 (366)
T ss_pred ccccchhh-hccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeecc-CCCcCcccCCCHHHHHHHHhhhhhe
Confidence 44443100 1222321 1223344555555677765543332 33443323 356556665541 123344
Q ss_pred ccCcccceEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy4818 403 SGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 437 (734)
Q Consensus 403 ~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~ 437 (734)
..+.+...+. .+|+. -....++|. ++|
T Consensus 286 A~n~~~glV~--lTSP~-GN~~vi~da-----~tG 312 (366)
T COG3490 286 AANRRDGLVA--LTSPR-GNRAVIWDA-----ATG 312 (366)
T ss_pred eecccCCeEE--EecCC-CCeEEEEEc-----CCC
Confidence 4443333333 33432 235788998 677
No 385
>KOG0308|consensus
Probab=96.05 E-value=0.65 Score=50.35 Aligned_cols=277 Identities=9% Similarity=0.121 Sum_probs=135.0
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc---c--ccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY---P--EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~---~--~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
....++.+.+-.|+.. ....|++|++..-... + ... .......++-.-+|+.|.-++.|.
T Consensus 29 ~Lq~da~~~ryLfTgG----RDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt--------- 95 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGG----RDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT--------- 95 (735)
T ss_pred hccccCCCCceEEecC----CCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc---------
Confidence 4455655555445443 3357999987543211 1 011 111124455566788777776543
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC---CCC
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG---KFP 295 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~---~~~ 295 (734)
.|.+|+......- ..-....+..|+-.+++-...+.++.+ ++-..+|++||+.++.. .++. ..+
T Consensus 96 -------TVK~W~~~~~~~~--c~stir~H~DYVkcla~~ak~~~lvaS---gGLD~~IflWDin~~~~-~l~~s~n~~t 162 (735)
T KOG0308|consen 96 -------TVKVWNAHKDNTF--CMSTIRTHKDYVKCLAYIAKNNELVAS---GGLDRKIFLWDINTGTA-TLVASFNNVT 162 (735)
T ss_pred -------eEEEeecccCcch--hHhhhhcccchheeeeecccCceeEEe---cCCCccEEEEEccCcch-hhhhhccccc
Confidence 5666665443211 111112233466666662333333332 23337999999998533 1111 011
Q ss_pred ceeee-ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC
Q psy4818 296 LKTVI-PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 296 ~~~l~-~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
...+. ......|..-..+...++ ++. +....|..||..+.+ +...|..+. ..+..+...+++.-+++++.+|
T Consensus 163 ~~sl~sG~k~siYSLA~N~t~t~i-vsG--gtek~lr~wDprt~~--kimkLrGHT--dNVr~ll~~dDGt~~ls~sSDg 235 (735)
T KOG0308|consen 163 VNSLGSGPKDSIYSLAMNQTGTII-VSG--GTEKDLRLWDPRTCK--KIMKLRGHT--DNVRVLLVNDDGTRLLSASSDG 235 (735)
T ss_pred cccCCCCCccceeeeecCCcceEE-Eec--CcccceEEecccccc--ceeeeeccc--cceEEEEEcCCCCeEeecCCCc
Confidence 11122 222233332222222233 222 234568889987765 234555444 4455565665566666776664
Q ss_pred ceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFE 453 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (734)
.|.+|||..-+.+..+..+ .+ +-++..+++-+.++ ++. .-..+|+-|+ .+.. +.+++-..+-|-.
T Consensus 236 --tIrlWdLgqQrCl~T~~vH~e~-VWaL~~~~sf~~vY---sG~-rd~~i~~Tdl-----~n~~-~~tlick~daPv~- 301 (735)
T KOG0308|consen 236 --TIRLWDLGQQRCLATYIVHKEG-VWALQSSPSFTHVY---SGG-RDGNIYRTDL-----RNPA-KSTLICKEDAPVL- 301 (735)
T ss_pred --eEEeeeccccceeeeEEeccCc-eEEEeeCCCcceEE---ecC-CCCcEEeccc-----CCch-hheEeecCCCchh-
Confidence 7899999433444455445 44 43555555444443 322 2356899998 3421 4455444332211
Q ss_pred CCCc--eEEEEEEEcCCC
Q psy4818 454 PTLF--QTKQVYFRSKDG 469 (734)
Q Consensus 454 ~~~~--~~~~~~~~s~dg 469 (734)
.-.+ .-+.+|+.+.|+
T Consensus 302 ~l~~~~~~~~~WvtTtds 319 (735)
T KOG0308|consen 302 KLHLHEHDNSVWVTTTDS 319 (735)
T ss_pred hhhhccccCCceeeeccc
Confidence 1111 124457777666
No 386
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.05 E-value=0.031 Score=55.38 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=27.5
Q ss_pred HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC-ceeEEEEc
Q psy4818 555 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALIL 599 (734)
Q Consensus 555 ~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~ 599 (734)
+.+.|.+..... +-+-++|+|.||.+.=+++.+.|+ .++-.|+.
T Consensus 68 vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 68 VCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp HHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred HHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 444444432222 468999999999999999988765 34555553
No 387
>KOG2237|consensus
Probab=96.00 E-value=0.011 Score=63.86 Aligned_cols=107 Identities=19% Similarity=0.217 Sum_probs=75.3
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCc-EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc
Q psy4818 102 NYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGT-TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 180 (734)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~-~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~ 180 (734)
+..|.|+...++..+++--...+...+++||.|++++++. +..+-...|||.++|||..+..|++.+++ |.++....+
T Consensus 97 ~vl~~rr~~~~e~~~~ld~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~~ 175 (712)
T KOG2237|consen 97 YVLYCRRLLEKEEEVFLDPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTV-VIDVKFSGP 175 (712)
T ss_pred hhHHHHhhhhcccceecCCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCcccee-eeeeccCCc
Confidence 3344444332333333333334556779999999998854 55555669999999999999999999999 999988876
Q ss_pred ccccccccccCeeEEEc-CCcEEEEEEEecC
Q psy4818 181 YPEVLKNVKFPSISWTH-DHKGFFYNQYCDI 210 (734)
Q Consensus 181 ~~~~~~~~~~~~~~wSp-Dg~~l~y~~~~~~ 210 (734)
...... -.++..+|.. ||+.|.|...++.
T Consensus 176 ~~~~~~-~g~~y~~w~~~dg~~l~~~t~~~~ 205 (712)
T KOG2237|consen 176 VWTHDG-KGVSYLAWAKQDGEDLLYGTEDEN 205 (712)
T ss_pred eeeccC-CceEeeeecccCCceeeeeeeccc
Confidence 543222 2347889987 8998888877654
No 388
>KOG0299|consensus
Probab=95.96 E-value=2.5 Score=44.06 Aligned_cols=199 Identities=17% Similarity=0.151 Sum_probs=102.0
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc----c-------------cc-ccc-ccCeeEEEcCCcE
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----E-------------VL-KNV-KFPSISWTHDHKG 201 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~----~-------------~~-~~~-~~~~~~wSpDg~~ 201 (734)
..++.++.+|||++++ |+.+.+| +|--|++.+|+... . .. ... ..-.++-|+||++
T Consensus 142 ~~s~~~vals~d~~~~-fsask~g----~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky 216 (479)
T KOG0299|consen 142 QLSVTSVALSPDDKRV-FSASKDG----TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY 216 (479)
T ss_pred cCcceEEEeeccccce-eecCCCc----ceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence 4557789999999976 4444443 67777777776221 0 00 111 1235788999999
Q ss_pred EEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEe
Q psy4818 202 FFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 281 (734)
Q Consensus 202 l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d 281 (734)
|++...+ ..|.+|+..+... +..|. .+.+-+.+++|-..-..|+ +.+ ....+.+|+
T Consensus 217 latgg~d----------------~~v~Iw~~~t~eh--v~~~~--ghr~~V~~L~fr~gt~~ly-s~s---~Drsvkvw~ 272 (479)
T KOG0299|consen 217 LATGGRD----------------RHVQIWDCDTLEH--VKVFK--GHRGAVSSLAFRKGTSELY-SAS---ADRSVKVWS 272 (479)
T ss_pred EEecCCC----------------ceEEEecCcccch--hhccc--ccccceeeeeeecCcccee-eee---cCCceEEEe
Confidence 9886543 2577888877653 22332 2333455666644444443 222 124566676
Q ss_pred CCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE
Q psy4818 282 LHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA 360 (734)
Q Consensus 282 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~ 360 (734)
++.. .....+..+....... .... .+.+-+..+ +..+.+|.+.... +.+..+. ...++.+.+
T Consensus 273 ~~~~--------s~vetlyGHqd~v~~IdaL~r-eR~vtVGgr---DrT~rlwKi~ees----qlifrg~-~~sidcv~~ 335 (479)
T KOG0299|consen 273 IDQL--------SYVETLYGHQDGVLGIDALSR-ERCVTVGGR---DRTVRLWKIPEES----QLIFRGG-EGSIDCVAF 335 (479)
T ss_pred hhHh--------HHHHHHhCCccceeeechhcc-cceEEeccc---cceeEEEeccccc----eeeeeCC-CCCeeeEEE
Confidence 6551 1122233322222221 1122 233333223 2345555553221 3344443 445666666
Q ss_pred eeCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 361 VANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 361 ~~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
.++.++ ++.+.+ ..|++|++...+.
T Consensus 336 In~~Hf-vsGSdn--G~IaLWs~~KKkp 360 (479)
T KOG0299|consen 336 INDEHF-VSGSDN--GSIALWSLLKKKP 360 (479)
T ss_pred ecccce-eeccCC--ceEEEeeecccCc
Confidence 664554 445455 3788998854443
No 389
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=95.96 E-value=0.54 Score=46.42 Aligned_cols=202 Identities=15% Similarity=0.112 Sum_probs=95.7
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
.++++|.||+++|+.+.+. +..|+..+..+.. -...-+.. .+-..++++.-+|++++. .
T Consensus 24 ~SGLTy~pd~~tLfaV~d~---------------~~~i~els~~G~v-lr~i~l~g---~~D~EgI~y~g~~~~vl~-~- 82 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDE---------------PGEIYELSLDGKV-LRRIPLDG---FGDYEGITYLGNGRYVLS-E- 82 (248)
T ss_dssp EEEEEEETTTTEEEEEETT---------------TTEEEEEETT--E-EEEEE-SS----SSEEEEEE-STTEEEEE-E-
T ss_pred ccccEEcCCCCeEEEEECC---------------CCEEEEEcCCCCE-EEEEeCCC---CCCceeEEEECCCEEEEE-E-
Confidence 3899999999999887742 3468777764321 11111221 223467889888877653 2
Q ss_pred cCCCCceEEEEeCCCCCCCcccCCCCceeee---c-cccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCc
Q psy4818 270 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---P-GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW 343 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~---~-~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 343 (734)
.....|+++++.. .+..+.. ...+.+. . ..+.+.. .|++.+++|++...+ .+ ..||.++...... ..
T Consensus 83 --Er~~~L~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P-~~l~~~~~~~~~~-~~ 155 (248)
T PF06977_consen 83 --ERDQRLYIFTIDD-DTTSLDR-ADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KP-KRLYEVNGFPGGF-DL 155 (248)
T ss_dssp --TTTTEEEEEEE-----TT--E-EEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SS-EEEEEEESTT-SS---
T ss_pred --cCCCcEEEEEEec-cccccch-hhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CC-hhhEEEccccCcc-ce
Confidence 1225788887744 1111110 0111111 1 1222333 388998999987654 23 4588887621110 01
Q ss_pred eEee----c--CCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCC---------ceEEeeccCcc
Q psy4818 344 KTLI----P--EDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDL---------GQITHISGRRK 407 (734)
Q Consensus 344 ~~l~----~--~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~---------g~v~~~~~~~d 407 (734)
.... . ...-..++++... ..+++++.+.+. ..|..+|. +|+.+..+.+.. -...+++++++
T Consensus 156 ~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es--~~l~~~d~-~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~ 232 (248)
T PF06977_consen 156 FVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES--RLLLELDR-QGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPD 232 (248)
T ss_dssp EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT--TEEEEE-T-T--EEEEEE-STTGGG-SS---SEEEEEE-TT
T ss_pred eeccccccccccceeccccceEEcCCCCeEEEEECCC--CeEEEECC-CCCEEEEEEeCCcccCcccccCCccEEEECCC
Confidence 1100 0 0001123344433 235777775443 57888886 787655544332 13456777777
Q ss_pred cceEEEEEecCCCCceEEEE
Q psy4818 408 YNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 408 ~~~l~~~~ss~~~P~~~~~~ 427 (734)
| .++++. .|...|++
T Consensus 233 G-~LYIvs----EpNlfy~f 247 (248)
T PF06977_consen 233 G-NLYIVS----EPNLFYRF 247 (248)
T ss_dssp ---EEEEE----TTTEEEEE
T ss_pred C-CEEEEc----CCceEEEe
Confidence 6 566653 26677765
No 390
>KOG2096|consensus
Probab=95.89 E-value=0.45 Score=47.03 Aligned_cols=155 Identities=13% Similarity=0.184 Sum_probs=84.8
Q ss_pred CeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCC
Q psy4818 249 RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPK 327 (734)
Q Consensus 249 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~ 327 (734)
..-+..++||.|||+|+-... ...|.+|++.+...+. ..-.+.-+ ..+.... .|+||-+.+++...+ +.
T Consensus 86 ~~~vt~~~FsSdGK~lat~~~----Dr~Ir~w~~~DF~~~e---Hr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~-g~- 155 (420)
T KOG2096|consen 86 KKEVTDVAFSSDGKKLATISG----DRSIRLWDVRDFENKE---HRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKR-GN- 155 (420)
T ss_pred CCceeeeEEcCCCceeEEEeC----CceEEEEecchhhhhh---hhHhhccc-cCCCceEEEECCCcceEEEEEcc-CC-
Confidence 335678999999999985432 2578889887732211 11111111 1111122 389998888776653 22
Q ss_pred ceEEEEecCCCCCCCc-eEeecCC-------CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceE
Q psy4818 328 GKVVTINLNNPCEKNW-KTLIPED-------ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQI 399 (734)
Q Consensus 328 ~~l~~~d~~~~~~~~~-~~l~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v 399 (734)
+|+.+-+........ ...++.+ ....+..+...++..++.+...+ ..|.+|+++ |+.+..|.......
T Consensus 156 -~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~d--t~i~lw~lk-Gq~L~~idtnq~~n 231 (420)
T KOG2096|consen 156 -KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLD--TKICLWDLK-GQLLQSIDTNQSSN 231 (420)
T ss_pred -EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCC--CcEEEEecC-Cceeeeeccccccc
Confidence 355544432110000 0111111 11223345555655666666555 579999996 98888887654444
Q ss_pred EeeccCcccceEEEEEecCC
Q psy4818 400 THISGRRKYNEVFYGFTSFL 419 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~ 419 (734)
....++|+|+.++. +.|+
T Consensus 232 ~~aavSP~GRFia~--~gFT 249 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAV--SGFT 249 (420)
T ss_pred cceeeCCCCcEEEE--ecCC
Confidence 45667899865543 4555
No 391
>KOG4378|consensus
Probab=95.85 E-value=0.58 Score=49.00 Aligned_cols=199 Identities=12% Similarity=0.088 Sum_probs=108.1
Q ss_pred eEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 167 WNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
...+.+||+....+.....+.. .+..+.+.-...+|+-++. ...|-+|.+.+++.. ..|..
T Consensus 100 ~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~----------------gGdiiih~~~t~~~t--t~f~~ 161 (673)
T KOG4378|consen 100 SGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSD----------------GGDIIIHGTKTKQKT--TTFTI 161 (673)
T ss_pred CceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEecc----------------CCcEEEEecccCccc--cceec
Confidence 3688999998543322111111 1122333333445555543 226888988887654 33443
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee-eeccccceEEE-EEecCCeEEEEeCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT-VIPGMDHHHEI-IANNGPELIVKTTK 323 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~-l~~~~~~~~~~-~s~dg~~l~~~s~~ 323 (734)
+. .....-+.+||..|+++.+++. ...|.+||+.+. .+... ...+......+ |+|-...|++..
T Consensus 162 ~s-gqsvRll~ys~skr~lL~~asd---~G~VtlwDv~g~--------sp~~~~~~~HsAP~~gicfspsne~l~vsV-- 227 (673)
T KOG4378|consen 162 DS-GQSVRLLRYSPSKRFLLSIASD---KGAVTLWDVQGM--------SPIFHASEAHSAPCRGICFSPSNEALLVSV-- 227 (673)
T ss_pred CC-CCeEEEeecccccceeeEeecc---CCeEEEEeccCC--------CcccchhhhccCCcCcceecCCccceEEEe--
Confidence 32 2244468899999999877654 357899999871 11111 11111111122 888777666543
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCc-eeeeeCCCCceEEee
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQITHI 402 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~-~~~~l~~~~g~v~~~ 402 (734)
|.+-+|+.+|..... ....|+-+. .+..+.+.+++.+++..... .+|+.||+..-+ .+..+.....+|..+
T Consensus 228 -G~Dkki~~yD~~s~~--s~~~l~y~~---Plstvaf~~~G~~L~aG~s~--G~~i~YD~R~~k~Pv~v~sah~~sVt~v 299 (673)
T KOG4378|consen 228 -GYDKKINIYDIRSQA--STDRLTYSH---PLSTVAFSECGTYLCAGNSK--GELIAYDMRSTKAPVAVRSAHDASVTRV 299 (673)
T ss_pred -cccceEEEeeccccc--ccceeeecC---CcceeeecCCceEEEeecCC--ceEEEEecccCCCCceEeeecccceeEE
Confidence 335689999986543 123444433 44556666656666665444 589999995333 223333334445555
Q ss_pred ccC
Q psy4818 403 SGR 405 (734)
Q Consensus 403 ~~~ 405 (734)
++.
T Consensus 300 afq 302 (673)
T KOG4378|consen 300 AFQ 302 (673)
T ss_pred Eee
Confidence 544
No 392
>KOG1282|consensus
Probab=95.83 E-value=0.057 Score=57.79 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=86.4
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHH----------------HHHHhcCeEEEEEe
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRC----------------MFLRHFNGIYAIPN 525 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~----------------~~l~~~G~~v~~~~ 525 (734)
+.+....+..+..+++.... .....|+||++-||||.+...++..+.. .| .+ -..++..|
T Consensus 49 v~v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySW-nk-~aNiLfLd 124 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSW-NK-EANILFLD 124 (454)
T ss_pred EECCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccc-cc-cccEEEEe
Confidence 44444467788888877653 2456899999999999874333211110 12 11 23477778
Q ss_pred cccCCCCCchhhhccccccCCCchhHHHH-HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHH----hcC-----C-Ccee
Q psy4818 526 IRGGGELGEDWHNAGRLLKKQNCFDDFQA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACL----NQR-----P-ELYG 594 (734)
Q Consensus 526 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~----~~~-----p-~~~~ 594 (734)
.+-|.||.-.=...........+.+|... ..+|+.+...-..+.+.|.|.||+|..+-+++ ..+ | --++
T Consensus 125 ~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred cCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 77766665221111111122334566654 46677766655666899999999996665554 322 2 2579
Q ss_pred EEEEcCCcchhcc
Q psy4818 595 AALILVGALDMLR 607 (734)
Q Consensus 595 a~v~~~~~~d~~~ 607 (734)
+++.+.|++|...
T Consensus 205 G~~IGNg~td~~~ 217 (454)
T KOG1282|consen 205 GYAIGNGLTDPEI 217 (454)
T ss_pred EEEecCcccCccc
Confidence 9999999988653
No 393
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.83 E-value=0.014 Score=49.08 Aligned_cols=58 Identities=28% Similarity=0.268 Sum_probs=43.3
Q ss_pred CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 652 PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 652 P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+|+|+++++.|+..|+..++++.++|... .+++.++.||+.....+. -....+.+||.
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-----------~lvt~~g~gHg~~~~~s~--C~~~~v~~yl~ 92 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPGS-----------RLVTVDGAGHGVYAGGSP--CVDKAVDDYLL 92 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCCc-----------eEEEEeccCcceecCCCh--HHHHHHHHHHH
Confidence 45999999999999999999999888644 688899999997632221 22333556665
No 394
>KOG3975|consensus
Probab=95.78 E-value=0.49 Score=45.42 Aligned_cols=129 Identities=15% Similarity=0.129 Sum_probs=66.0
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHH-hcC--eEEEEEecccCCCCCchhhhccccc-c
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR-HFN--GIYAIPNIRGGGELGEDWHNAGRLL-K 544 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~-~~G--~~v~~~~~rG~~~~g~~~~~~~~~~-~ 544 (734)
|..+......|--.+.....|+|+++-|.||.. +|-..++..|. ..+ .-|..+-.-|+......-.++.... .
T Consensus 10 gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~---gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~ 86 (301)
T KOG3975|consen 10 GLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLL---GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNE 86 (301)
T ss_pred CCcccceeeeeeeccCCCCceEEEEecCCCCch---hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccc
Confidence 433444444444434457789999999887754 33333333222 222 1233333333322321212221111 1
Q ss_pred CCCchhHHHHH-HHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc--eeEEEEcCC
Q psy4818 545 KQNCFDDFQAA-AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL--YGAALILVG 601 (734)
Q Consensus 545 ~~~~~~D~~~~-~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~ 601 (734)
....++|.+.- +.++ ++..-.-.||.++|||-|+|+++.++-..... ..-+++..|
T Consensus 87 eifsL~~QV~HKlaFi-k~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 87 EIFSLQDQVDHKLAFI-KEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred cccchhhHHHHHHHHH-HHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 22345666554 4444 33334446999999999999999998633332 233444444
No 395
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=95.75 E-value=0.026 Score=54.42 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=44.5
Q ss_pred EEEecCCCCCcCCccccHHHHHHHHhcCeE---EEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 491 IIYGYGGYGVSVLPTFSISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 491 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
||++||-.+ .....|... .+.|.++||. |+..+|-..... ...... .........+.+.++.+.+ ++..
T Consensus 4 VVlVHG~~~-~~~~~w~~~-~~~l~~~GY~~~~vya~tyg~~~~~--~~~~~~--~~~~~~~~~l~~fI~~Vl~--~TGa 75 (219)
T PF01674_consen 4 VVLVHGTGG-NAYSNWSTL-APYLKAAGYCDSEVYALTYGSGNGS--PSVQNA--HMSCESAKQLRAFIDAVLA--YTGA 75 (219)
T ss_dssp EEEE--TTT-TTCGGCCHH-HHHHHHTT--CCCEEEE--S-CCHH--THHHHH--HB-HHHHHHHHHHHHHHHH--HHT-
T ss_pred EEEECCCCc-chhhCHHHH-HHHHHHcCCCcceeEeccCCCCCCC--Cccccc--ccchhhHHHHHHHHHHHHH--hhCC
Confidence 567799643 233455554 4556667999 799997432221 111110 0111223445555555543 3566
Q ss_pred CcEEEEEcChHHHHHHHHHh
Q psy4818 568 KYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~ 587 (734)
+|-|+|||+||.++-+++.
T Consensus 76 -kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp --EEEEEETCHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHH
Confidence 8999999999999988875
No 396
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.75 E-value=1.6 Score=42.97 Aligned_cols=216 Identities=18% Similarity=0.165 Sum_probs=102.9
Q ss_pred EEEEEECCCCCcccccccccccCeeE--EEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSIS--WTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 246 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~--wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~ 246 (734)
+|..+|+.+|+.+....-.....+.. -.++++.|+.... ...|+.+++.++.. +--+..+
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~----------------~~~l~~~d~~tG~~--~W~~~~~ 65 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASG----------------DGNLYALDAKTGKV--LWRFDLP 65 (238)
T ss_dssp EEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEET----------------TSEEEEEETTTSEE--EEEEECS
T ss_pred EEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcC----------------CCEEEEEECCCCCE--EEEeecc
Confidence 56777777776543221110112222 3457777776632 22688888766631 1112221
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce-eeecccc-ceEE--EEEecCCeEEEEeC
Q psy4818 247 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGMD-HHHE--IIANNGPELIVKTT 322 (734)
Q Consensus 247 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-~l~~~~~-~~~~--~~s~dg~~l~~~s~ 322 (734)
. . ....+ ..++..+++... .+.|+.+|+.+|. ..|. ....... .... ....+++.+++...
T Consensus 66 ~-~-~~~~~--~~~~~~v~v~~~----~~~l~~~d~~tG~-------~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (238)
T PF13360_consen 66 G-P-ISGAP--VVDGGRVYVGTS----DGSLYALDAKTGK-------VLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTS 130 (238)
T ss_dssp S-C-GGSGE--EEETTEEEEEET----TSEEEEEETTTSC-------EEEEEEE-SSCTCSTB--SEEEEETTEEEEEET
T ss_pred c-c-cccee--eecccccccccc----eeeeEecccCCcc-------eeeeeccccccccccccccCceEecCEEEEEec
Confidence 1 1 11111 234444444331 1478899987742 2333 1211100 1111 23445788887665
Q ss_pred CCCCCceEEEEecCCCCCCCceEeecCCCC-cee------EEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC
Q psy4818 323 KNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTL------DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 395 (734)
Q Consensus 323 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~------~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~ 395 (734)
...|+.+|+++++. .|+.-+..... ..+ .......++.+++.. .++ .+..+|+++|+.+-...
T Consensus 131 ----~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g--~~~~~d~~tg~~~w~~~-- 200 (238)
T PF13360_consen 131 ----SGKLVALDPKTGKL-LWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSS-GDG--RVVAVDLATGEKLWSKP-- 200 (238)
T ss_dssp ----CSEEEEEETTTTEE-EEEEESSTT-SS--EEEETTEEEEEECCTTEEEEEC-CTS--SEEEEETTTTEEEEEEC--
T ss_pred ----cCcEEEEecCCCcE-EEEeecCCCCCCcceeeecccccceEEECCEEEEEc-CCC--eEEEEECCCCCEEEEec--
Confidence 35699999988752 23333322111 111 122223335555443 333 25666999998543222
Q ss_pred CceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy4818 396 LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 437 (734)
Q Consensus 396 ~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~ 437 (734)
...+.. ....+++.+++.. . -..++.+|+ ++|
T Consensus 201 ~~~~~~-~~~~~~~~l~~~~-~---~~~l~~~d~-----~tG 232 (238)
T PF13360_consen 201 ISGIYS-LPSVDGGTLYVTS-S---DGRLYALDL-----KTG 232 (238)
T ss_dssp SS-ECE-CEECCCTEEEEEE-T---TTEEEEEET-----TTT
T ss_pred CCCccC-CceeeCCEEEEEe-C---CCEEEEEEC-----CCC
Confidence 222222 1234556666554 2 368999999 677
No 397
>PLN02209 serine carboxypeptidase
Probab=95.67 E-value=0.029 Score=60.48 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=79.6
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccH---------------------HHHHHHHhcCe
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI---------------------SRCMFLRHFNG 519 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---------------------~~~~~l~~~G~ 519 (734)
.+.+....+..+..+++.... .....|+|+++-||||.+...++.. .-..|.. -.
T Consensus 43 y~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~a 118 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK--TA 118 (437)
T ss_pred EEEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh--cC
Confidence 344433345556666655443 2356899999999998864321100 0012332 35
Q ss_pred EEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHH-HcCCCCCCcEEEEEcChHHHHHHHHHh----cC-----
Q psy4818 520 IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI-NKKYTKPKYITIMGGSNGGLLVGACLN----QR----- 589 (734)
Q Consensus 520 ~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~~~~~~~~----~~----- 589 (734)
.++.+|.+-|.||...=..... ..-..+.+|+...++... .........+.|+|.||||..+..++. ..
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 6888898877777622111111 111123456655554333 333334457999999999986666543 21
Q ss_pred C-CceeEEEEcCCcchhc
Q psy4818 590 P-ELYGAALILVGALDML 606 (734)
Q Consensus 590 p-~~~~a~v~~~~~~d~~ 606 (734)
+ =.++++++..|++|..
T Consensus 198 ~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 198 PPINLQGYVLGNPITHIE 215 (437)
T ss_pred CceeeeeEEecCcccChh
Confidence 1 1468999999988753
No 398
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.65 E-value=0.029 Score=60.48 Aligned_cols=132 Identities=13% Similarity=0.134 Sum_probs=76.4
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc---------------------HHHHHHHHhcCeEEEEEecc
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS---------------------ISRCMFLRHFNGIYAIPNIR 527 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~---------------------~~~~~~l~~~G~~v~~~~~r 527 (734)
+..+..+++...+ .....|+|+++-||||.+...++. ..-..|.. -..++.+|.+
T Consensus 49 ~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK--MANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh--cCcEEEecCC
Confidence 4556666665443 245789999999999876421110 00012332 3568888988
Q ss_pred cCCCCCchhhhccccccC-CCchhHHHHHHH-HHHHcCCCCCCcEEEEEcChHHHHHHHHHhc----C-----C-CceeE
Q psy4818 528 GGGELGEDWHNAGRLLKK-QNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLNQ----R-----P-ELYGA 595 (734)
Q Consensus 528 G~~~~g~~~~~~~~~~~~-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~----~-----p-~~~~a 595 (734)
-|.||... ........ ....+|+...++ |+..........+.|.|.||||..+..++.. + + =-+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 77777521 11101111 112345555544 3433333345679999999999876666432 1 1 15789
Q ss_pred EEEcCCcchhc
Q psy4818 596 ALILVGALDML 606 (734)
Q Consensus 596 ~v~~~~~~d~~ 606 (734)
+++..|++|..
T Consensus 203 i~iGNg~t~~~ 213 (433)
T PLN03016 203 YMLGNPVTYMD 213 (433)
T ss_pred eEecCCCcCch
Confidence 99999987664
No 399
>KOG0267|consensus
Probab=95.64 E-value=0.032 Score=60.61 Aligned_cols=116 Identities=11% Similarity=0.150 Sum_probs=70.7
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+...|..+.|+++...|+- |.....|.+||++.++.+.... .-.+...+.|.|=|.+++-.+.+.
T Consensus 69 hespIeSl~f~~~E~Llaa-----gsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdt--------- 134 (825)
T KOG0267|consen 69 HESPIESLTFDTSERLLAA-----GSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDT--------- 134 (825)
T ss_pred cCCcceeeecCcchhhhcc-----cccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccc---------
Confidence 3456788999999999884 3334589999999988654322 222335778999776553222211
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+..|++.-.. +++.-..+......+.++|||+|++ .+++.+.+.+||+..
T Consensus 135 -------d~~iwD~Rk~G----c~~~~~s~~~vv~~l~lsP~Gr~v~----~g~ed~tvki~d~~a 185 (825)
T KOG0267|consen 135 -------DLKIWDIRKKG----CSHTYKSHTRVVDVLRLSPDGRWVA----SGGEDNTVKIWDLTA 185 (825)
T ss_pred -------cceehhhhccC----ceeeecCCcceeEEEeecCCCceee----ccCCcceeeeecccc
Confidence 23444433211 2222222333344578999999998 334457888888865
No 400
>KOG4283|consensus
Probab=95.61 E-value=1.1 Score=43.98 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=73.2
Q ss_pred EEeeEEeCCCCc---EEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSDNGK---HFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SPDG~---~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+...+|||=.. .||. |.+..+|++.|+++|.......+ ...+-++.|||-..+|+++..-+
T Consensus 145 ~VYshamSp~a~sHcLiA~-----gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD--------- 210 (397)
T KOG4283|consen 145 KVYSHAMSPMAMSHCLIAA-----GTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSAD--------- 210 (397)
T ss_pred eeehhhcChhhhcceEEEE-----ecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCC---------
Confidence 366778888544 4443 23346899999999985322111 11236889999999999986422
Q ss_pred ccccCCcEEEEEECCCC----------CCCCeeEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCC
Q psy4818 219 TTAHMGQKIYYHVLGTE----------QDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 286 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~----------~~~~~~v~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~ 286 (734)
..+.+|++... +.....+.+ .+.+.+-+.+++|+.||++++.. +..+++.+|+...|.
T Consensus 211 ------g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~----gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 211 ------GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASC----GTDDRIRVWNMESGR 279 (397)
T ss_pred ------ceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhc----cCccceEEeecccCc
Confidence 13444443211 111111222 33344456789999999999843 233788999988754
No 401
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.53 E-value=0.029 Score=55.29 Aligned_cols=84 Identities=14% Similarity=0.038 Sum_probs=52.0
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHH-HHHHHHHcCCCCCC
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA-AAEYMINKKYTKPK 568 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~ 568 (734)
.|+++|++.|... .|. .++..|...++.|..+.++|-+. ......+++++++ .++.+.+.. ...
T Consensus 2 ~lf~~p~~gG~~~--~y~-~la~~l~~~~~~v~~i~~~~~~~----------~~~~~~si~~la~~y~~~I~~~~--~~g 66 (229)
T PF00975_consen 2 PLFCFPPAGGSAS--SYR-PLARALPDDVIGVYGIEYPGRGD----------DEPPPDSIEELASRYAEAIRARQ--PEG 66 (229)
T ss_dssp EEEEESSTTCSGG--GGH-HHHHHHTTTEEEEEEECSTTSCT----------TSHEESSHHHHHHHHHHHHHHHT--SSS
T ss_pred eEEEEcCCccCHH--HHH-HHHHhCCCCeEEEEEEecCCCCC----------CCCCCCCHHHHHHHHHHHhhhhC--CCC
Confidence 5788898866432 344 34566654248899999888431 1122234555544 344444332 112
Q ss_pred cEEEEEcChHHHHHHHHHhc
Q psy4818 569 YITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~ 588 (734)
.+.|+|||+||.+|..+|.+
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHHHH
Confidence 79999999999999998754
No 402
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=95.51 E-value=0.33 Score=48.36 Aligned_cols=126 Identities=11% Similarity=0.014 Sum_probs=69.8
Q ss_pred EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc---CCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc
Q psy4818 465 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 465 ~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
++.-| .|.+.+.-. +++++|+||-.|--.-.. ....|+....+.+.+ .|.++-+|.+|..+-...+-.
T Consensus 5 ~t~~G-~v~V~v~G~----~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~--- 75 (283)
T PF03096_consen 5 ETPYG-SVHVTVQGD----PKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPE--- 75 (283)
T ss_dssp EETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----T---
T ss_pred ccCce-EEEEEEEec----CCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccc---
Confidence 33444 466665532 235799999999732111 223333344455654 899999999996542212111
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
...-.+.+++...+..+.++--+ +.+..+|--+|+++-...+..+|++.-+.|+..|.
T Consensus 76 -~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 76 -GYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp -T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred -cccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 11123445555544444443122 46999999999999999999999999999988774
No 403
>KOG0276|consensus
Probab=95.50 E-value=1.1 Score=48.54 Aligned_cols=196 Identities=11% Similarity=0.060 Sum_probs=108.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+....|-+--++|+. |++..+|+|++..|++.+..- ...-....++-.|---.++-.++|
T Consensus 58 vRa~kfiaRknWiv~-----GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDD-------------- 118 (794)
T KOG0276|consen 58 VRAAKFIARKNWIVT-----GSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDD-------------- 118 (794)
T ss_pred hhhheeeeccceEEE-----ecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCc--------------
Confidence 444555555555553 556789999999999854321 111112355666655444433332
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
..|..|+.+..= .-..+|++ +..+++.+++.|....-+.+.+ -...|.+|.+.. +. +--.+. +
T Consensus 119 --m~iKlW~we~~w-a~~qtfeG--H~HyVMqv~fnPkD~ntFaS~s---LDrTVKVWslgs-~~-------~nfTl~-g 181 (794)
T KOG0276|consen 119 --MTIKLWDWENEW-ACEQTFEG--HEHYVMQVAFNPKDPNTFASAS---LDRTVKVWSLGS-PH-------PNFTLE-G 181 (794)
T ss_pred --cEEEEeeccCce-eeeeEEcC--cceEEEEEEecCCCccceeeee---ccccEEEEEcCC-CC-------Cceeee-c
Confidence 245555554321 22346664 4568999999996554433322 225788888877 22 222233 3
Q ss_pred ccceEE-E-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 303 MDHHHE-I-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 303 ~~~~~~-~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
...+.. + +-+-|++=|+++.. .+..+-+||..++. +...+.+. ...++.+.+.+.=-|+++.+++| .+.+
T Consensus 182 HekGVN~Vdyy~~gdkpylIsga--DD~tiKvWDyQtk~---CV~TLeGH-t~Nvs~v~fhp~lpiiisgsEDG--Tvri 253 (794)
T KOG0276|consen 182 HEKGVNCVDYYTGGDKPYLISGA--DDLTIKVWDYQTKS---CVQTLEGH-TNNVSFVFFHPELPIIISGSEDG--TVRI 253 (794)
T ss_pred cccCcceEEeccCCCcceEEecC--CCceEEEeecchHH---HHHHhhcc-cccceEEEecCCCcEEEEecCCc--cEEE
Confidence 333333 2 44566666666654 34568888987765 33333332 34445555544345777777775 4556
Q ss_pred EEC
Q psy4818 381 HDL 383 (734)
Q Consensus 381 ~dl 383 (734)
|.-
T Consensus 254 Whs 256 (794)
T KOG0276|consen 254 WNS 256 (794)
T ss_pred ecC
Confidence 653
No 404
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.49 E-value=0.042 Score=36.73 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=20.8
Q ss_pred eEEEEEEecCCcEEEEEEecCC-CCceEEE
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNT-QGSDLHY 279 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~-~~~~i~~ 279 (734)
....+.|||||++|+|.+.+.. ...+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 4567999999999999988752 2256764
No 405
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.47 E-value=0.053 Score=53.35 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=64.0
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCe--EEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG--IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
....++||+||.. ........ ..+++....|+ .++.+..+..|.. ..|..+ ...-...-.++...++.|.+.
T Consensus 16 ~~~~vlvfVHGyn-~~f~~a~~-r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d--~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYN-NSFEDALR-RAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYD--RESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCC-CCHHHHHH-HHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhh--hhhHHHHHHHHHHHHHHHHhc-
Confidence 4677999999953 33221111 12333333333 6888888865432 122221 111122334555555665544
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcC----C-----CceeEEEEcCCcchh
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQR----P-----ELYGAALILVGALDM 605 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~----p-----~~~~a~v~~~~~~d~ 605 (734)
....+|.|++||||+.+++.++.+- + ..|..+|+.+|-+|.
T Consensus 90 -~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 -PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred -cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 3467999999999999999987541 1 245666666665544
No 406
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.47 E-value=1.5 Score=43.26 Aligned_cols=191 Identities=17% Similarity=0.094 Sum_probs=92.1
Q ss_pred eCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEE
Q psy4818 149 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 228 (734)
Q Consensus 149 ~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~ 228 (734)
..+++++|... +.. ..|+.+|..+|+.+........+.... ..++..|++...+ ..|+
T Consensus 32 ~~~~~~~v~~~-~~~----~~l~~~d~~tG~~~W~~~~~~~~~~~~-~~~~~~v~v~~~~----------------~~l~ 89 (238)
T PF13360_consen 32 AVPDGGRVYVA-SGD----GNLYALDAKTGKVLWRFDLPGPISGAP-VVDGGRVYVGTSD----------------GSLY 89 (238)
T ss_dssp EEEETTEEEEE-ETT----SEEEEEETTTSEEEEEEECSSCGGSGE-EEETTEEEEEETT----------------SEEE
T ss_pred EEEeCCEEEEE-cCC----CEEEEEECCCCCEEEEeecccccccee-eecccccccccce----------------eeeE
Confidence 34456665554 222 479999999998643221111111112 3456667665521 1677
Q ss_pred EEECCCCCCCCeeEEe---cC-CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc
Q psy4818 229 YHVLGTEQDKDIPVVE---FP-NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 304 (734)
Q Consensus 229 ~~~l~t~~~~~~~v~~---~~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~ 304 (734)
.++..++.. ++. .. .............+|..+++... ...|+.+|+.+|.. -|..-.....
T Consensus 90 ~~d~~tG~~----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~l~~~d~~tG~~-------~w~~~~~~~~ 154 (238)
T PF13360_consen 90 ALDAKTGKV----LWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTS----SGKLVALDPKTGKL-------LWKYPVGEPR 154 (238)
T ss_dssp EEETTTSCE----EEEEEE-SSCTCSTB--SEEEEETTEEEEEET----CSEEEEEETTTTEE-------EEEEESSTT-
T ss_pred ecccCCcce----eeeeccccccccccccccCceEecCEEEEEec----cCcEEEEecCCCcE-------EEEeecCCCC
Confidence 777666542 222 11 00111122334444777665442 25788888887421 1211111100
Q ss_pred ---------ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 305 ---------HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 305 ---------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.......-.++.+|+.+.. + .++.+|+++++.. |+.. . .. ........++.+++.. .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g---~~~~~d~~tg~~~-w~~~-~---~~-~~~~~~~~~~~l~~~~-~~-- 221 (238)
T PF13360_consen 155 GSSPISSFSDINGSPVISDGRVYVSSGD-G---RVVAVDLATGEKL-WSKP-I---SG-IYSLPSVDGGTLYVTS-SD-- 221 (238)
T ss_dssp SS--EEEETTEEEEEECCTTEEEEECCT-S---SEEEEETTTTEEE-EEEC-S---S--ECECEECCCTEEEEEE-TT--
T ss_pred CCcceeeecccccceEEECCEEEEEcCC-C---eEEEEECCCCCEE-EEec-C---CC-ccCCceeeCCEEEEEe-CC--
Confidence 0111122223466655443 2 2777798887521 3211 1 12 2221234446666655 43
Q ss_pred eeEEEEECCCCcee
Q psy4818 376 SVMDLHDLNTGKRL 389 (734)
Q Consensus 376 ~~l~~~dl~~g~~~ 389 (734)
..|+.+|+++|+.+
T Consensus 222 ~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 222 GRLYALDLKTGKVV 235 (238)
T ss_dssp TEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEE
Confidence 68999999999863
No 407
>KOG4328|consensus
Probab=95.42 E-value=2.9 Score=43.66 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=129.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc---ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~---~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..++++.|||-..--.|+++..| +|+..|++++.. +..-..+..+++..++.+...++|...-+
T Consensus 235 ~~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G--------- 301 (498)
T KOG4328|consen 235 GPVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG--------- 301 (498)
T ss_pred ccccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc---------
Confidence 35888999999988888887776 599999998763 22112444567888888888888776421
Q ss_pred ccccCCcEEEEEECCCCCC--CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC-C
Q psy4818 219 TTAHMGQKIYYHVLGTEQD--KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF-P 295 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~--~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~ 295 (734)
.+-++++.++.. +.+.+.. .-+.++++.|-..+++.+.+-. ....+||+..... .. +
T Consensus 302 -------~f~~iD~R~~~s~~~~~~lh~-----kKI~sv~~NP~~p~~laT~s~D---~T~kIWD~R~l~~-----K~sp 361 (498)
T KOG4328|consen 302 -------NFNVIDLRTDGSEYENLRLHK-----KKITSVALNPVCPWFLATASLD---QTAKIWDLRQLRG-----KASP 361 (498)
T ss_pred -------ceEEEEeecCCccchhhhhhh-----cccceeecCCCCchheeecccC---cceeeeehhhhcC-----CCCc
Confidence 233444444332 2222221 2345789999998888765432 3566788765211 11 2
Q ss_pred ceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecC--CCCCCCceEeecCCCCceeEE-----EEEeeCCEEE
Q psy4818 296 LKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTLIPEDENRTLDV-----VAAVANNKLI 367 (734)
Q Consensus 296 ~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~l~ 367 (734)
..-.+.+...... +|||.|..|+ .+.. +..|-++|.. +.... ....+++.. ....+ +.|..+..++
T Consensus 362 ~lst~~HrrsV~sAyFSPs~gtl~-TT~~---D~~IRv~dss~~sa~~~-p~~~I~Hn~-~t~RwlT~fKA~W~P~~~li 435 (498)
T KOG4328|consen 362 FLSTLPHRRSVNSAYFSPSGGTLL-TTCQ---DNEIRVFDSSCISAKDE-PLGTIPHNN-RTGRWLTPFKAAWDPDYNLI 435 (498)
T ss_pred ceecccccceeeeeEEcCCCCceE-eecc---CCceEEeecccccccCC-ccceeeccC-cccccccchhheeCCCccEE
Confidence 2222333333333 5999998843 3332 2346667753 11111 123344431 11111 1233334455
Q ss_pred EEEEeCCceeEEEEECCCCceeeeeCCC-CceEEe-eccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITH-ISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~-~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.... ..|-++|-+.|+.+-.+..| ...|.+ ..+.|-+..++ ++.+.-+.+|++--
T Consensus 436 ~vg~~~--r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~---aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 436 VVGRYP--RPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLA---AGGNSSGKIYVFTN 494 (498)
T ss_pred EEeccC--cceeEEcCCCCEEeeeccCccccccccceeeccccccee---ccCCccceEEEEec
Confidence 444322 45888887555544555555 223322 23444443333 23333456776643
No 408
>KOG0269|consensus
Probab=95.42 E-value=0.36 Score=53.29 Aligned_cols=198 Identities=9% Similarity=0.036 Sum_probs=111.9
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+.-++..+.|++-.-.|..+-+ ....|..||+...+-......+. .+..+.|||--...|++..+.
T Consensus 132 H~Rs~~~ldfh~tep~iliSGS----QDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds--------- 198 (839)
T KOG0269|consen 132 HERSANKLDFHSTEPNILISGS----QDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS--------- 198 (839)
T ss_pred hccceeeeeeccCCccEEEecC----CCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC---------
Confidence 3456778899998888887544 44689999998776444333322 235789999654444444322
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
..|..|++... ++..+....+.+.+.-+.|+|++.|||- ++....|.+||..+... .+...
T Consensus 199 ------G~lqlWDlRqp---~r~~~k~~AH~GpV~c~nwhPnr~~lAT----GGRDK~vkiWd~t~~~~------~~~~t 259 (839)
T KOG0269|consen 199 ------GYLQLWDLRQP---DRCEKKLTAHNGPVLCLNWHPNREWLAT----GGRDKMVKIWDMTDSRA------KPKHT 259 (839)
T ss_pred ------ceEEEeeccCc---hhHHHHhhcccCceEEEeecCCCceeee----cCCCccEEEEeccCCCc------cceeE
Confidence 25777887654 2233333344556778999999999982 33347889999987321 11111
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC-EEEEEEEeCC
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNV 374 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~ 374 (734)
+ ..-.....+ |-|+-...+-.+. -.....|++||+.-+=. ....+..+ ..++..+.|..++ .+++..+.++
T Consensus 260 I-nTiapv~rVkWRP~~~~hLAtcs-mv~dtsV~VWDvrRPYI-P~~t~~eH--~~~vt~i~W~~~d~~~l~s~sKD~ 332 (839)
T KOG0269|consen 260 I-NTIAPVGRVKWRPARSYHLATCS-MVVDTSVHVWDVRRPYI-PYATFLEH--TDSVTGIAWDSGDRINLWSCSKDG 332 (839)
T ss_pred E-eecceeeeeeeccCccchhhhhh-ccccceEEEEeeccccc-cceeeecc--CccccceeccCCCceeeEeecCcc
Confidence 1 111111122 7777654333322 23456799999965320 11223233 3555666665433 3445555553
No 409
>KOG0285|consensus
Probab=95.40 E-value=0.75 Score=46.24 Aligned_cols=187 Identities=15% Similarity=0.153 Sum_probs=107.4
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
..++.-|-..+|+-.+.| ..+.+|++.+++- ....+.+-....++++|+---|++-.
T Consensus 155 r~vavdP~n~wf~tgs~D----------------rtikIwDlatg~L----kltltGhi~~vr~vavS~rHpYlFs~--- 211 (460)
T KOG0285|consen 155 RSVAVDPGNEWFATGSAD----------------RTIKIWDLATGQL----KLTLTGHIETVRGVAVSKRHPYLFSA--- 211 (460)
T ss_pred EEEeeCCCceeEEecCCC----------------ceeEEEEcccCeE----EEeecchhheeeeeeecccCceEEEe---
Confidence 356667766555544433 2688899998863 23333344466789999999998732
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccc----eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH----HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT 345 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~----~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 345 (734)
.....|..||++.. +++....+ .+.. ..|--+ +++...+ +..+-+||+.+.. ++..
T Consensus 212 -gedk~VKCwDLe~n------------kvIR~YhGHlS~V~~L~lhPTld-vl~t~gr---Dst~RvWDiRtr~--~V~~ 272 (460)
T KOG0285|consen 212 -GEDKQVKCWDLEYN------------KVIRHYHGHLSGVYCLDLHPTLD-VLVTGGR---DSTIRVWDIRTRA--SVHV 272 (460)
T ss_pred -cCCCeeEEEechhh------------hhHHHhccccceeEEEeccccce-eEEecCC---cceEEEeeecccc--eEEE
Confidence 33478999999871 12222211 1221 223222 4444433 3457788987764 2333
Q ss_pred eecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceE
Q psy4818 346 LIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 424 (734)
Q Consensus 346 l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~ 424 (734)
+..+. ..+..+... -+.+++ +.+.+ ..+.+||+..|+....++...-++.+++..|+... |..++ |..+
T Consensus 273 l~GH~--~~V~~V~~~~~dpqvi-t~S~D--~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~--fASas---~dni 342 (460)
T KOG0285|consen 273 LSGHT--NPVASVMCQPTDPQVI-TGSHD--STVRLWDLRAGKTMITLTHHKKSVRALCLHPKENL--FASAS---PDNI 342 (460)
T ss_pred ecCCC--CcceeEEeecCCCceE-EecCC--ceEEEeeeccCceeEeeecccceeeEEecCCchhh--hhccC---Cccc
Confidence 33333 334444333 224544 44444 57999999999987777766667778888887532 22222 3355
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
-.+++
T Consensus 343 k~w~~ 347 (460)
T KOG0285|consen 343 KQWKL 347 (460)
T ss_pred eeccC
Confidence 66666
No 410
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.38 E-value=0.035 Score=53.98 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=46.2
Q ss_pred ecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEE
Q psy4818 525 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALI 598 (734)
Q Consensus 525 ~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~ 598 (734)
=+||.......|.+....... ........|++|+.+.-...++.|.+.|||.||++|..++...++ ++..+++
T Consensus 42 aFRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~ 118 (224)
T PF11187_consen 42 AFRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYS 118 (224)
T ss_pred EEECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEE
Confidence 367765555667765443322 234445677777765422334569999999999999999877433 4455554
No 411
>KOG4388|consensus
Probab=95.25 E-value=0.045 Score=58.23 Aligned_cols=88 Identities=16% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCcEEEEecCCCCC-cCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc---
Q psy4818 487 RNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK--- 562 (734)
Q Consensus 487 ~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 562 (734)
..-+|++.|||... +...+.-+...+|..+.|.-|+.+||.-..| .......+.+.-|.-|++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHHH
Confidence 45589999998443 4555666667788878899999999876544 33456678888888888876
Q ss_pred -CCCCCCcEEEEEcChHHHHHHHHH
Q psy4818 563 -KYTKPKYITIMGGSNGGLLVGACL 586 (734)
Q Consensus 563 -~~~d~~ri~i~G~S~GG~~~~~~~ 586 (734)
|+ ..+||++.|.|+||.+.+-++
T Consensus 464 lG~-TgEriv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 464 LGS-TGERIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred hCc-ccceEEEeccCCCcceeehhH
Confidence 33 457999999999999876554
No 412
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.24 E-value=3.4 Score=40.64 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=50.4
Q ss_pred CCeEEEeCCCCcCC-------CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc--ccccccccCeeEE
Q psy4818 125 GSTEVFLDPNKLSK-------DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP--EVLKNVKFPSISW 195 (734)
Q Consensus 125 g~~~~l~d~~~~~~-------~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~--~~~~~~~~~~~~w 195 (734)
|..-.+||++.-.+ .+..-.+.-.|||||++|.-+...-...+..|-|+|...+-... ....+.....+.|
T Consensus 90 Gtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~l 169 (366)
T COG3490 90 GTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTL 169 (366)
T ss_pred CceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEE
Confidence 44455666654321 22233456789999998876655544455689999987543211 1122233357899
Q ss_pred EcCCcEEEEEE
Q psy4818 196 THDHKGFFYNQ 206 (734)
Q Consensus 196 SpDg~~l~y~~ 206 (734)
++||+.++...
T Consensus 170 m~DGrtlvvan 180 (366)
T COG3490 170 MADGRTLVVAN 180 (366)
T ss_pred ecCCcEEEEeC
Confidence 99999888754
No 413
>KOG2182|consensus
Probab=95.13 E-value=0.15 Score=53.86 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=80.9
Q ss_pred EEEEEeccccCCCCCcEEEEecCCCCCcCCc-c-ccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc-------c
Q psy4818 474 MYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-T-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL-------K 544 (734)
Q Consensus 474 ~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~-~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~-------~ 544 (734)
=++|.+..+. ....|+.|++-|-......| . -...+..+..+.|..|+....|= ||..+-- +.+. .
T Consensus 73 q~~y~n~~~~-~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRF---YG~S~P~-~~~st~nlk~LS 147 (514)
T KOG2182|consen 73 QRFYNNNQWA-KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRF---YGQSSPI-GDLSTSNLKYLS 147 (514)
T ss_pred hheeeccccc-cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeec---cccCCCC-CCCcccchhhhh
Confidence 3444454442 34568888885532122122 1 12246788888999999999997 6654222 1111 1
Q ss_pred CCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 545 KQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
-...+.|+...|+.+-.+ +..++.+.+.+|+||=|.|++|.=..+|++..++|+.++
T Consensus 148 s~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 148 SLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 123467777777777555 456767999999999999999999999998777776544
No 414
>KOG2565|consensus
Probab=95.11 E-value=0.076 Score=53.70 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=73.3
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhc---------CeEEEEEecccCCCCCchhhh
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF---------NGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~rG~~~~g~~~~~ 538 (734)
.|.+|+-.-+.|+..+..++.-.|+.+||.||+-.. |-. +..+|..- -|-|++|.++| || |.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E--Fyk-fIPlLT~p~~hg~~~d~~FEVI~PSlPG---yg--wSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE--FYK-FIPLLTDPKRHGNESDYAFEVIAPSLPG---YG--WSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHH--HHh-hhhhhcCccccCCccceeEEEeccCCCC---cc--cCc
Confidence 577888888877754333333345666999987432 111 22334322 36799999998 76 444
Q ss_pred ccccccCCCchhHHHHHHHHH-HHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYM-INKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
+. ...|-+.. .+..+.+-| ...|+ ++..|.|+-+|..++..++..+|+.+.+.=+..
T Consensus 204 ~~-sk~GFn~~-a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 204 AP-SKTGFNAA-ATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred CC-ccCCccHH-HHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 32 12222222 333334433 33343 689999999999999999999999766554443
No 415
>KOG1920|consensus
Probab=95.09 E-value=9.7 Score=45.03 Aligned_cols=225 Identities=12% Similarity=0.091 Sum_probs=106.6
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCC----C----C
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDIN----G----T 213 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~----~----~ 213 (734)
..+-++.+--|+..|.++... .+|.+.|.++........-...+...+||||++.++.++....- . .
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~-----G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i 143 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITAL-----GDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPI 143 (1265)
T ss_pred cceEEEEEecccceEEEEecC-----CcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccch
Confidence 346677888888888776642 25777788877632211111123688999999999988753210 0 0
Q ss_pred -CCCCcccccCCcEEEEEECCCCCCC------------CeeEEecC-----CCCeeEEEEEEecCCcEEEEEEecCCCC-
Q psy4818 214 -ADGTETTAHMGQKIYYHVLGTEQDK------------DIPVVEFP-----NGRSLGLHSEVTDCGRYLLVSTSNNTQG- 274 (734)
Q Consensus 214 -~~~~~~~~~~~~~l~~~~l~t~~~~------------~~~v~~~~-----~~~~~~~~~~~SpDG~~l~~~~~~~~~~- 274 (734)
|...+.+..+..+. +++|=+..+ ...+..++ +....-.+++|--||++.+++.......
T Consensus 144 ~E~~L~~d~~~~sk~--v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~ 221 (1265)
T KOG1920|consen 144 AEKPLDADDERKSKF--VNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGT 221 (1265)
T ss_pred hcccccccccccccc--ceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCc
Confidence 00000000000000 011100000 00000000 0001123589999999999866543333
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCce
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT 354 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 354 (734)
..|.+||.++ . |...... .......-.|-|.|..+...-.... ..+|..+.-++-....+..-.+.+ ...
T Consensus 222 RkirV~drEg-~---Lns~se~----~~~l~~~LsWkPsgs~iA~iq~~~s-d~~IvffErNGL~hg~f~l~~p~d-e~~ 291 (1265)
T KOG1920|consen 222 RKIRVYDREG-A---LNSTSEP----VEGLQHSLSWKPSGSLIAAIQCKTS-DSDIVFFERNGLRHGEFVLPFPLD-EKE 291 (1265)
T ss_pred eeEEEecccc-h---hhcccCc----ccccccceeecCCCCeEeeeeecCC-CCcEEEEecCCccccccccCCccc-ccc
Confidence 6888998774 1 1000000 0111111238888877765544432 336777776654332232222222 111
Q ss_pred eEEEEEeeCCEEEEEEEeCCc-eeEEEEEC
Q psy4818 355 LDVVAAVANNKLIVHYIQNVR-SVMDLHDL 383 (734)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~-~~l~~~dl 383 (734)
++...|..+..++........ ..|++|-.
T Consensus 292 ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 292 VEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred hheeeecCCCCceeeeecccccceEEEEEe
Confidence 455555544444444333333 44777765
No 416
>KOG1408|consensus
Probab=95.02 E-value=0.94 Score=49.69 Aligned_cols=106 Identities=6% Similarity=0.069 Sum_probs=62.6
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC---CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCC
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE---NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG 386 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g 386 (734)
+.|..+.++.... +.+|-.+++.+++ .+..+.+.. +..+. +.... ..+|+..+-.. ..|.++|.-+|
T Consensus 604 Vdp~~k~v~t~cQ----Drnirif~i~sgK---q~k~FKgs~~~eG~lIK-v~lDP-SgiY~atScsd-ktl~~~Df~sg 673 (1080)
T KOG1408|consen 604 VDPTSKLVVTVCQ----DRNIRIFDIESGK---QVKSFKGSRDHEGDLIK-VILDP-SGIYLATSCSD-KTLCFVDFVSG 673 (1080)
T ss_pred eCCCcceEEEEec----ccceEEEeccccc---eeeeecccccCCCceEE-EEECC-CccEEEEeecC-CceEEEEeccc
Confidence 6666665554433 2347777887766 244555432 23332 33333 44554443221 46888999899
Q ss_pred ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 387 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 387 ~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+...+.......|.++-+.+|-+.++ +.++. +-+|+|.+
T Consensus 674 EcvA~m~GHsE~VTG~kF~nDCkHlI-SvsgD---gCIFvW~l 712 (1080)
T KOG1408|consen 674 ECVAQMTGHSEAVTGVKFLNDCKHLI-SVSGD---GCIFVWKL 712 (1080)
T ss_pred hhhhhhcCcchheeeeeecccchhhe-eecCC---ceEEEEEC
Confidence 98777776655677888888876654 44443 36777776
No 417
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.01 E-value=2 Score=44.27 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=81.0
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccC-CCCCchh-
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDW- 536 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~~~- 536 (734)
-+.+++.. ++.++ ..+++|... ....-+||++||.......+........-|.+.||+.+.+..+.- +..-...
T Consensus 62 ~e~~~L~~-~~~~f-laL~~~~~~--~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 62 DEVQWLQA-GEERF-LALWRPANS--AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred hhcEEeec-CCEEE-EEEEecccC--CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 34555554 44444 456666542 344558889998655555555555566778889999999887750 0000000
Q ss_pred ------hhcccc---------------------ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC
Q psy4818 537 ------HNAGRL---------------------LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR 589 (734)
Q Consensus 537 ------~~~~~~---------------------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~ 589 (734)
..++.. ......+.-+.+++.++.+++. .+|+|+|++.|+++++.++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 000000 0011223344556666665543 3499999999999999999887
Q ss_pred CC-ceeEEEEcCCc
Q psy4818 590 PE-LYGAALILVGA 602 (734)
Q Consensus 590 p~-~~~a~v~~~~~ 602 (734)
+. ...+.|+..+.
T Consensus 215 ~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 215 PPPMPDALVLINAY 228 (310)
T ss_pred CCcccCeEEEEeCC
Confidence 64 35677766653
No 418
>KOG1007|consensus
Probab=95.01 E-value=2.2 Score=41.78 Aligned_cols=113 Identities=13% Similarity=0.170 Sum_probs=75.4
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc-cc-----ccc-ccccCeeEEEc--CCcEEEEEEEecCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PE-----VLK-NVKFPSISWTH--DHKGFFYNQYCDINGT 213 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~-~~-----~~~-~~~~~~~~wSp--Dg~~l~y~~~~~~~~~ 213 (734)
.+..+.|-|++.+||-..+ ..|.+|+++.+..+ .. ..+ ...+.+-+||| ||..++.+..
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d------ 192 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD------ 192 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC------
Confidence 5778999999999996653 46889998876541 11 111 22456789999 8888876653
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
..++.+++.|.... ..| + ..+.....++.+.|+-++++.+.. +...|.+||...
T Consensus 193 -----------~tl~~~D~RT~~~~-~sI-~-dAHgq~vrdlDfNpnkq~~lvt~g---DdgyvriWD~R~ 246 (370)
T KOG1007|consen 193 -----------STLQFWDLRTMKKN-NSI-E-DAHGQRVRDLDFNPNKQHILVTCG---DDGYVRIWDTRK 246 (370)
T ss_pred -----------CcEEEEEccchhhh-cch-h-hhhcceeeeccCCCCceEEEEEcC---CCccEEEEeccC
Confidence 25788888764321 111 1 123335667889999999887653 336788999876
No 419
>KOG1408|consensus
Probab=94.86 E-value=0.22 Score=54.37 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=68.1
Q ss_pred CCeEEEeCCCCcCCCC-----cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcC
Q psy4818 125 GSTEVFLDPNKLSKDG-----TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHD 198 (734)
Q Consensus 125 g~~~~l~d~~~~~~~~-----~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpD 198 (734)
|-..+|+++..-...+ ...+..++|||||||+|-... | ....+.||+++....+.+.. ......-.+|||-
T Consensus 57 GCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEc--G-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~ 133 (1080)
T KOG1408|consen 57 GCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGEC--G-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPG 133 (1080)
T ss_pred CcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEeccc--C-CCccceeeeeccccchhhhhhccccceeeeecCC
Confidence 4445566655332221 235788999999999995432 2 23579999998765432221 2222367899999
Q ss_pred CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEE
Q psy4818 199 HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 268 (734)
Q Consensus 199 g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~ 268 (734)
+|+|.-+.... .....++-|+........ .-...+..++||.||.|.+-..
T Consensus 134 ~kyvvSVGsQH------------DMIVnv~dWr~N~~~asn-------kiss~Vsav~fsEdgSYfvT~g 184 (1080)
T KOG1408|consen 134 NKYVVSVGSQH------------DMIVNVNDWRVNSSGASN-------KISSVVSAVAFSEDGSYFVTSG 184 (1080)
T ss_pred CcEEEeecccc------------ceEEEhhhhhhccccccc-------ccceeEEEEEEccCCceeeeee
Confidence 99887654311 001122322222111110 0122456789999999987543
No 420
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.82 E-value=0.47 Score=47.72 Aligned_cols=101 Identities=16% Similarity=0.031 Sum_probs=57.6
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhc-CeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF-NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.+.|+||+ ||-......++.. .+.+++... |.-+.++.+ | .+ .+++ +-.+..+.+..+.+.|.+...
T Consensus 24 ~~~P~Viw-HG~GD~c~~~g~~-~~~~l~~~~~g~~~~~i~i-g-~~-----~~~s---~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 24 VSVPFIML-HGIGTQCSDATNA-NFTQLLTNLSGSPGFCLEI-G-NG-----VGDS---WLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCCeEEe-cCCCcccCCchHH-HHHHHHHhCCCCceEEEEE-C-CC-----cccc---ceeCHHHHHHHHHHHHhhchh
Confidence 46788777 9864444433322 345666443 555555554 2 11 1111 222333445555556555333
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCC--ceeEEEEc
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPE--LYGAALIL 599 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~ 599 (734)
.. +-+-++|+|.||.+.=+++.+.|+ ..+-.|+.
T Consensus 92 l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 92 LS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred hh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 32 358999999999999999988876 24555543
No 421
>KOG0290|consensus
Probab=94.82 E-value=3.5 Score=40.54 Aligned_cols=256 Identities=11% Similarity=0.078 Sum_probs=130.2
Q ss_pred EEeeEEeC--CCC-cEEEEEEeCC-CCceEEEEEEECCCCCcccccccc--cccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 143 ALKLYAFS--DNG-KHFAYCLSKS-GSDWNTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 143 ~~~~~~~S--PDG-~~la~~~~~~-g~~~~~l~v~dl~~g~~~~~~~~~--~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
.+.+..|| ||- -+||..+-.. -+..-+|.-.|.++++.+...... ....-+.|.||.+.++= .. .
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~p-dl--L------ 116 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYP-DL--L------ 116 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCc-ch--h------
Confidence 34555566 443 3466654322 122345666666777765433211 12256889999875542 10 0
Q ss_pred CcccccCCcEEEEEECCCCCCC--CeeEEecCCCCe---eEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDK--DIPVVEFPNGRS---LGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~--~~~v~~~~~~~~---~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
......|.+|+++....+ -..+.....+.. -..++.|.. |-++|...+ - + ...-+||++++....
T Consensus 117 ----ATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS-i--D-TTCTiWdie~~~~~~- 187 (364)
T KOG0290|consen 117 ----ATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS-I--D-TTCTIWDIETGVSGT- 187 (364)
T ss_pred ----hcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec-c--c-CeEEEEEEeeccccc-
Confidence 011124666666643221 111111111111 133566765 445554322 1 2 456677888741111
Q ss_pred cCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC--CceeEEEEEeeCCEEE
Q psy4818 291 SGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE--NRTLDVVAAVANNKLI 367 (734)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~l~ 367 (734)
-..+|+.+....+.. |+..|..++..... ++.+-.+|+...+. ..++-+.+ ...+.-..+.+.+--|
T Consensus 188 ----vkTQLIAHDKEV~DIaf~~~s~~~FASvga---DGSvRmFDLR~leH---STIIYE~p~~~~pLlRLswnkqDpny 257 (364)
T KOG0290|consen 188 ----VKTQLIAHDKEVYDIAFLKGSRDVFASVGA---DGSVRMFDLRSLEH---STIIYEDPSPSTPLLRLSWNKQDPNY 257 (364)
T ss_pred ----eeeEEEecCcceeEEEeccCccceEEEecC---CCcEEEEEeccccc---ceEEecCCCCCCcceeeccCcCCchH
Confidence 124577666666665 77765555544332 44577788876553 33343332 2334344444323222
Q ss_pred EEEEeCCceeEEEEECCC-CceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~~-g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...-......+.++|+.. +..+.+|..+.+.|.++.+.|....-+.++.... +..++|+
T Consensus 258 mATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~---qaliWDl 317 (364)
T KOG0290|consen 258 MATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDC---QALIWDL 317 (364)
T ss_pred HhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcc---eEEEEec
Confidence 222222335788888743 3344566666788889999998877766655443 5677888
No 422
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.81 E-value=2 Score=47.62 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=58.8
Q ss_pred EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEE
Q psy4818 253 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 332 (734)
Q Consensus 253 ~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 332 (734)
..+.++|||++++++.........+..++..+ .++...+.-.. ...+.+||+..++ + ..++-+
T Consensus 238 d~v~~spdGk~afvTsyNsE~G~tl~em~a~e---------~d~~vvfni~~--iea~vkdGK~~~V--~----gn~V~V 300 (635)
T PRK02888 238 DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAE---------RDWVVVFNIAR--IEEAVKAGKFKTI--G----GSKVPV 300 (635)
T ss_pred ccceECCCCCEEEEeccCcccCcceeeecccc---------CceEEEEchHH--HHHhhhCCCEEEE--C----CCEEEE
Confidence 35789999999998764322224555555544 12222221110 1125678887665 1 235888
Q ss_pred EecCCCC--CCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCCceeEEEEECCCCc
Q psy4818 333 INLNNPC--EKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 333 ~d~~~~~--~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
+|..+.. .......++-. ... .++.+ ++++++|+.. ...+.+.++|+++-+
T Consensus 301 ID~~t~~~~~~~v~~yIPVG-KsP-HGV~vSPDGkylyVan--klS~tVSVIDv~k~k 354 (635)
T PRK02888 301 VDGRKAANAGSALTRYVPVP-KNP-HGVNTSPDGKYFIANG--KLSPTVTVIDVRKLD 354 (635)
T ss_pred EECCccccCCcceEEEEECC-CCc-cceEECCCCCEEEEeC--CCCCcEEEEEChhhh
Confidence 9987610 01234444433 112 22333 4545555443 234678899986543
No 423
>KOG0281|consensus
Probab=94.53 E-value=0.36 Score=48.09 Aligned_cols=216 Identities=13% Similarity=0.163 Sum_probs=117.2
Q ss_pred CCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeE
Q psy4818 163 SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV 242 (734)
Q Consensus 163 ~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v 242 (734)
+|....+|.+||..+-+.+....+... +-+..-=|.+-|.-.+.+ ..|.+|++.++..-.+++
T Consensus 212 SGlrDnTikiWD~n~~~c~~~L~GHtG-SVLCLqyd~rviisGSSD----------------sTvrvWDv~tge~l~tli 274 (499)
T KOG0281|consen 212 SGLRDNTIKIWDKNSLECLKILTGHTG-SVLCLQYDERVIVSGSSD----------------STVRVWDVNTGEPLNTLI 274 (499)
T ss_pred cccccCceEEeccccHHHHHhhhcCCC-cEEeeeccceEEEecCCC----------------ceEEEEeccCCchhhHHh
Confidence 466678999999887765543333331 334444466533333322 268888988876544433
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeC
Q psy4818 243 VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTT 322 (734)
Q Consensus 243 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~ 322 (734)
.. -..+..+.++. .+++ +.+. ...+.+||+.. +. . ...+.+..+.......+.=|.+ |+++.
T Consensus 275 hH----ceaVLhlrf~n--g~mv-tcSk---DrsiaVWdm~s-ps-~----it~rrVLvGHrAaVNvVdfd~k--yIVsA 336 (499)
T KOG0281|consen 275 HH----CEAVLHLRFSN--GYMV-TCSK---DRSIAVWDMAS-PT-D----ITLRRVLVGHRAAVNVVDFDDK--YIVSA 336 (499)
T ss_pred hh----cceeEEEEEeC--CEEE-EecC---CceeEEEeccC-ch-H----HHHHHHHhhhhhheeeeccccc--eEEEe
Confidence 22 22445666653 3333 2222 24678888877 32 1 1122233333344444444555 44444
Q ss_pred CCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEee
Q psy4818 323 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 402 (734)
Q Consensus 323 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~ 402 (734)
. + +..|-+|+..+.+ +...+.+....+. ..-.. ++++++.+.+ ..+.+||+..|+.++.|.....-|..+
T Consensus 337 S-g-DRTikvW~~st~e---fvRtl~gHkRGIA--ClQYr-~rlvVSGSSD--ntIRlwdi~~G~cLRvLeGHEeLvRci 406 (499)
T KOG0281|consen 337 S-G-DRTIKVWSTSTCE---FVRTLNGHKRGIA--CLQYR-DRLVVSGSSD--NTIRLWDIECGACLRVLEGHEELVRCI 406 (499)
T ss_pred c-C-CceEEEEecccee---eehhhhcccccce--ehhcc-CeEEEecCCC--ceEEEEeccccHHHHHHhchHHhhhhe
Confidence 3 2 3458889988876 3333333222221 11233 7888887766 579999999999888887664444333
Q ss_pred ccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 403 SGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 403 ~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
-+ |.++++ +. .+ -+.+-++|+
T Consensus 407 RF--d~krIV-SG-aY--DGkikvWdl 427 (499)
T KOG0281|consen 407 RF--DNKRIV-SG-AY--DGKIKVWDL 427 (499)
T ss_pred ee--cCceee-ec-cc--cceEEEEec
Confidence 33 333332 11 11 245667777
No 424
>KOG2321|consensus
Probab=94.33 E-value=1 Score=48.13 Aligned_cols=93 Identities=18% Similarity=0.270 Sum_probs=50.2
Q ss_pred ceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC------Cc----
Q psy4818 328 GKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD------LG---- 397 (734)
Q Consensus 328 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~------~g---- 397 (734)
..||+++++.+. |-..+.-. ...+..+....-+.|+.....+ +.+..||..+......|... .+
T Consensus 155 ~evYRlNLEqGr---fL~P~~~~-~~~lN~v~in~~hgLla~Gt~~--g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~ 228 (703)
T KOG2321|consen 155 SEVYRLNLEQGR---FLNPFETD-SGELNVVSINEEHGLLACGTED--GVVEFWDPRDKSRVGTLDAASSVNSHPGGDAA 228 (703)
T ss_pred cceEEEEccccc---cccccccc-cccceeeeecCccceEEecccC--ceEEEecchhhhhheeeecccccCCCcccccc
Confidence 468888888765 22111111 1222333333335677776655 36777887554433333211 12
Q ss_pred -eEEeeccCcccceEEEEEecCCCCceEEEEeCC
Q psy4818 398 -QITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 430 (734)
Q Consensus 398 -~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~ 430 (734)
+|+++.++.++=.+.+..+ -+.+|+||+.
T Consensus 229 ~svTal~F~d~gL~~aVGts----~G~v~iyDLR 258 (703)
T KOG2321|consen 229 PSVTALKFRDDGLHVAVGTS----TGSVLIYDLR 258 (703)
T ss_pred CcceEEEecCCceeEEeecc----CCcEEEEEcc
Confidence 3667777766655655443 3579999993
No 425
>PRK13613 lipoprotein LpqB; Provisional
Probab=94.17 E-value=6.3 Score=44.47 Aligned_cols=172 Identities=12% Similarity=0.159 Sum_probs=91.1
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc----ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD----YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~----~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+..+++|+||+.+|+... +...+++-++..+.. ............++|.++| .++-. ...
T Consensus 364 ~~~s~avS~~g~~~A~v~~----~~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtv-d~~--------- 428 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA----DGDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLWVV-DRD--------- 428 (599)
T ss_pred CccceEEcCCCceEEEEcC----CCcEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEEEe-cCC---------
Confidence 4678999999999998853 225788877655443 1122233335788998888 56544 211
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC--CcccCCCCc
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD--GKISGKFPL 296 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~ 296 (734)
.... ++.+..-+++....+-.. .... .-+..+..|+||..+++..... ...+|++.-+..... ..|+ .+
T Consensus 429 --~~~~-~vl~v~~~~G~~~~V~~~-~l~g-~~I~~lrvSrDG~RvAvv~~~~-g~~~v~va~V~R~~~G~~~l~---~~ 499 (599)
T PRK13613 429 --PADP-RLLWLLQGDGEPVEVRTP-ELDG-HRVVAVRVARDGVRVALIVEKD-GRRSLQIGRIVRDAKAVVSVE---EF 499 (599)
T ss_pred --CCCc-eEEEEEcCCCcEEEeecc-ccCC-CEeEEEEECCCccEEEEEEecC-CCcEEEEEEEEeCCCCcEEee---cc
Confidence 1111 322222223222111111 1111 1467899999999999987653 335666654432111 1221 12
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
+.+.......... |..+ ..|+++....+....++.+.+++..
T Consensus 500 ~~l~~~l~~v~~~~W~~~-~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 500 RSLAPELEDVTDMSWAGD-SQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred EEeccCCCccceeEEcCC-CEEEEEeccCCCCcceEEEecCCcC
Confidence 2232222222222 7765 4576655433445669999998754
No 426
>KOG1034|consensus
Probab=94.05 E-value=7.3 Score=39.09 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=63.8
Q ss_pred ceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 166 DWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
-...|+|+|+.+++...-.. .+..+..+.+-|+.-.|+.+...+ +.|.+|++.+.. =+.||.
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD---------------~svRlwnI~~~~--Cv~VfG 175 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKD---------------HSVRLWNIQTDV--CVAVFG 175 (385)
T ss_pred ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCC---------------ceEEEEeccCCe--EEEEec
Confidence 45789999999887543222 222346778889887777766432 378889987653 345665
Q ss_pred cC-CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 245 FP-NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 245 ~~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
+- .+..-+.++.||+||.+|+ +.+....|.+|++.
T Consensus 176 G~egHrdeVLSvD~~~~gd~i~----ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 176 GVEGHRDEVLSVDFSLDGDRIA----SCGMDHSLKLWRLN 211 (385)
T ss_pred ccccccCcEEEEEEcCCCCeee----ccCCcceEEEEecC
Confidence 42 2344678999999999887 22223566667665
No 427
>KOG1523|consensus
Probab=94.05 E-value=2.5 Score=42.06 Aligned_cols=201 Identities=7% Similarity=0.032 Sum_probs=101.7
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC-CCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ-DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
...+|++|+..|+.+.... +|.+......+ .+ ...+..++......+.|+|.+..|+--..
T Consensus 14 tchAwn~drt~iAv~~~~~----------------evhiy~~~~~~~w~--~~htls~Hd~~vtgvdWap~snrIvtcs~ 75 (361)
T KOG1523|consen 14 TCHAWNSDRTQIAVSPNNH----------------EVHIYSMLGADLWE--PAHTLSEHDKIVTGVDWAPKSNRIVTCSH 75 (361)
T ss_pred eeeeecCCCceEEeccCCc----------------eEEEEEecCCCCce--eceehhhhCcceeEEeecCCCCceeEccC
Confidence 5679999999999877532 34444333322 22 23333445556778999999988874332
Q ss_pred cCCCCceEEEEeC-CCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCc--eE
Q psy4818 270 NNTQGSDLHYFDL-HSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW--KT 345 (734)
Q Consensus 270 ~~~~~~~i~~~d~-~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~~ 345 (734)
+ ..-|+|.. .++.- .+...|..-.+....+ |+|.+.+|++-+.. ..+-++-.+..+ .| ..
T Consensus 76 d----rnayVw~~~~~~~W------kptlvLlRiNrAAt~V~WsP~enkFAVgSga----r~isVcy~E~EN--dWWVsK 139 (361)
T KOG1523|consen 76 D----RNAYVWTQPSGGTW------KPTLVLLRINRAATCVKWSPKENKFAVGSGA----RLISVCYYEQEN--DWWVSK 139 (361)
T ss_pred C----CCccccccCCCCee------ccceeEEEeccceeeEeecCcCceEEeccCc----cEEEEEEEeccc--ceehhh
Confidence 2 23466655 33111 0111122222223333 99999988865432 223333333322 23 11
Q ss_pred eecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE---EEECCCC-------------ceeeeeCCCCceEEeeccCcccc
Q psy4818 346 LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD---LHDLNTG-------------KRLHSFPLDLGQITHISGRRKYN 409 (734)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~---~~dl~~g-------------~~~~~l~~~~g~v~~~~~~~d~~ 409 (734)
.+.-..+..+....|..++-++....-|+.-+++ +-+++.. +...+....-|.+.++.+++.+.
T Consensus 140 hikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~ 219 (361)
T KOG1523|consen 140 HIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGN 219 (361)
T ss_pred hhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCC
Confidence 1111113344555555545555555555543332 2222111 11111111135567788888898
Q ss_pred eEEEEEecCCCCceEEEEeC
Q psy4818 410 EVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 410 ~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.+.. ++..+...|.
T Consensus 220 ~lawv~----Hds~v~~~da 235 (361)
T KOG1523|consen 220 RLAWVG----HDSTVSFVDA 235 (361)
T ss_pred EeeEec----CCCceEEeec
Confidence 887654 3445777776
No 428
>KOG0290|consensus
Probab=93.86 E-value=1.4 Score=43.24 Aligned_cols=191 Identities=13% Similarity=0.141 Sum_probs=106.5
Q ss_pred CeeEEEEEeCCCCC--eEEEeCCCCcCCCCcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCc----ccccc
Q psy4818 113 NHSILYVQRNLTGS--TEVFLDPNKLSKDGTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKD----YPEVL 185 (734)
Q Consensus 113 ~~~~l~~~~~~~g~--~~~l~d~~~~~~~~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~----~~~~~ 185 (734)
.+..||+....+.. .+.++..++-+ +....+.++.|.- |-++|..++ .. .+.-|||+++|.. ++...
T Consensus 121 D~LRlWri~~ee~~~~~~~~L~~~kns-~~~aPlTSFDWne~dp~~igtSS-iD----TTCTiWdie~~~~~~vkTQLIA 194 (364)
T KOG0290|consen 121 DFLRLWRIGDEESRVELQSVLNNNKNS-EFCAPLTSFDWNEVDPNLIGTSS-ID----TTCTIWDIETGVSGTVKTQLIA 194 (364)
T ss_pred CeEEEEeccCcCCceehhhhhccCccc-ccCCcccccccccCCcceeEeec-cc----CeEEEEEEeeccccceeeEEEe
Confidence 46778887643222 23334444321 1123466777765 445554433 22 5778899998732 22223
Q ss_pred cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC-CcEE
Q psy4818 186 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC-GRYL 264 (734)
Q Consensus 186 ~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD-G~~l 264 (734)
....+..++|+.+|..+|.+..- ...+...++.... ....|++.+....-...++|++. -+++
T Consensus 195 HDKEV~DIaf~~~s~~~FASvga---------------DGSvRmFDLR~le-HSTIIYE~p~~~~pLlRLswnkqDpnym 258 (364)
T KOG0290|consen 195 HDKEVYDIAFLKGSRDVFASVGA---------------DGSVRMFDLRSLE-HSTIIYEDPSPSTPLLRLSWNKQDPNYM 258 (364)
T ss_pred cCcceeEEEeccCccceEEEecC---------------CCcEEEEEecccc-cceEEecCCCCCCcceeeccCcCCchHH
Confidence 33345789999988877665421 1256777776543 34567776653334556788774 5666
Q ss_pred EEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCC
Q psy4818 265 LVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNP 338 (734)
Q Consensus 265 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 338 (734)
+-... +.++|-++|+.- +. .++-+|-.+....... |.|....-+-. .|.+.+...||+...
T Consensus 259 ATf~~---dS~~V~iLDiR~-P~------tpva~L~~H~a~VNgIaWaPhS~~hict---aGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 259 ATFAM---DSNKVVILDIRV-PC------TPVARLRNHQASVNGIAWAPHSSSHICT---AGDDCQALIWDLQQM 320 (364)
T ss_pred hhhhc---CCceEEEEEecC-CC------cceehhhcCcccccceEecCCCCceeee---cCCcceEEEEecccc
Confidence 64432 237899999876 32 2333333333222223 88876644332 244567888998753
No 429
>KOG2541|consensus
Probab=93.78 E-value=1.1 Score=43.76 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=51.0
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhc-CeEEEEEecccCCCCCchhhhccccccCCCchhHHHH-HHHHHHHcCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHF-NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA-AAEYMINKKYT 565 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~ 565 (734)
.|+||+ ||-.......++. .+.+++.+. |..|.+.++--| -...|.. ...+... +.+.+. +..-
T Consensus 24 ~P~ii~-HGigd~c~~~~~~-~~~q~l~~~~g~~v~~leig~g--~~~s~l~---------pl~~Qv~~~ce~v~-~m~~ 89 (296)
T KOG2541|consen 24 VPVIVW-HGIGDSCSSLSMA-NLTQLLEELPGSPVYCLEIGDG--IKDSSLM---------PLWEQVDVACEKVK-QMPE 89 (296)
T ss_pred CCEEEE-eccCcccccchHH-HHHHHHHhCCCCeeEEEEecCC--cchhhhc---------cHHHHHHHHHHHHh-cchh
Confidence 677665 8865554443332 344555432 888888876322 1112222 2334444 444443 4333
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPE 591 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~ 591 (734)
-++-.-++|.|.||+++=+++...++
T Consensus 90 lsqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 90 LSQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred ccCceEEEEEccccHHHHHHHHhCCC
Confidence 45568999999999998888765443
No 430
>KOG0647|consensus
Probab=93.70 E-value=3.6 Score=40.67 Aligned_cols=152 Identities=9% Similarity=0.091 Sum_probs=85.7
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCce
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGK 329 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~ 329 (734)
.+..++|||.-..++. ..+ -.+.|.+|++.. . ..+.+ +............ |+.||.+++..+. +..
T Consensus 29 sIS~l~FSP~~~~~~~-A~S--WD~tVR~wevq~-~-g~~~~----ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~ 95 (347)
T KOG0647|consen 29 SISALAFSPQADNLLA-AGS--WDGTVRIWEVQN-S-GQLVP----KAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQ 95 (347)
T ss_pred chheeEeccccCceEE-ecc--cCCceEEEEEec-C-Ccccc----hhhhccCCCeEEEEEccCCceEEeecc----CCc
Confidence 3457899995444442 222 225778888765 1 11111 1111222233333 9999977664333 345
Q ss_pred EEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC--EEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcc
Q psy4818 330 VVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN--KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRK 407 (734)
Q Consensus 330 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d 407 (734)
+-.||+.++. ...+-.++ ..+..+.+..+. .++++.+-| ..|..||......+..+.+|.- ++.++. .
T Consensus 96 ~k~wDL~S~Q---~~~v~~Hd--~pvkt~~wv~~~~~~cl~TGSWD--KTlKfWD~R~~~pv~t~~LPeR-vYa~Dv--~ 165 (347)
T KOG0647|consen 96 AKLWDLASGQ---VSQVAAHD--APVKTCHWVPGMNYQCLVTGSWD--KTLKFWDTRSSNPVATLQLPER-VYAADV--L 165 (347)
T ss_pred eEEEEccCCC---eeeeeecc--cceeEEEEecCCCcceeEecccc--cceeecccCCCCeeeeeeccce-eeehhc--c
Confidence 8889998875 45555454 344555555432 356665554 4799999977777777777743 334433 2
Q ss_pred cceEEEEEecCCCCceEEEEeC
Q psy4818 408 YNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 408 ~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+++..+. ..|..|+|
T Consensus 166 ~pm~vVata~----r~i~vynL 183 (347)
T KOG0647|consen 166 YPMAVVATAE----RHIAVYNL 183 (347)
T ss_pred CceeEEEecC----CcEEEEEc
Confidence 3334444433 35888998
No 431
>KOG0300|consensus
Probab=93.50 E-value=5.1 Score=39.73 Aligned_cols=154 Identities=7% Similarity=0.109 Sum_probs=76.9
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceE
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKV 330 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l 330 (734)
.+....|-..|+.++-.+.+. .--+||+++|. .+..|+.....-...-.+-.++|++.+.++. .++|
T Consensus 274 vV~a~dWL~gg~Q~vTaSWDR----TAnlwDVEtge--------~v~~LtGHd~ELtHcstHptQrLVvTsSrDt-TFRL 340 (481)
T KOG0300|consen 274 VVSACDWLAGGQQMVTASWDR----TANLWDVETGE--------VVNILTGHDSELTHCSTHPTQRLVVTSSRDT-TFRL 340 (481)
T ss_pred ceEehhhhcCcceeeeeeccc----cceeeeeccCc--------eeccccCcchhccccccCCcceEEEEeccCc-eeEe
Confidence 444566777888877554432 33478888842 2333333222222223344577888777653 4445
Q ss_pred EEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCc-eeeeeCCCCceEEeeccCcccc
Q psy4818 331 VTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKYN 409 (734)
Q Consensus 331 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~-~~~~l~~~~g~v~~~~~~~d~~ 409 (734)
||....- +-..++.+. ...+.++.+..+++ +++.+++ ..+.+|||.+=. .+..|... ..+..+..+....
T Consensus 341 --WDFReaI--~sV~VFQGH-tdtVTS~vF~~dd~-vVSgSDD--rTvKvWdLrNMRsplATIRtd-S~~NRvavs~g~~ 411 (481)
T KOG0300|consen 341 --WDFREAI--QSVAVFQGH-TDTVTSVVFNTDDR-VVSGSDD--RTVKVWDLRNMRSPLATIRTD-SPANRVAVSKGHP 411 (481)
T ss_pred --ccchhhc--ceeeeeccc-ccceeEEEEecCCc-eeecCCC--ceEEEeeeccccCcceeeecC-CccceeEeecCCc
Confidence 5554211 113455544 34455555555344 4444444 468999985422 22233222 2223333443333
Q ss_pred eEEEEEecCCCCceEEEEeCC
Q psy4818 410 EVFYGFTSFLQPGTIYHCNIP 430 (734)
Q Consensus 410 ~l~~~~ss~~~P~~~~~~d~~ 430 (734)
.+++ +..-..+.+||+.
T Consensus 412 iIAi----PhDNRqvRlfDln 428 (481)
T KOG0300|consen 412 IIAI----PHDNRQVRLFDLN 428 (481)
T ss_pred eEEe----ccCCceEEEEecC
Confidence 4443 2334578888983
No 432
>KOG1523|consensus
Probab=93.39 E-value=2.2 Score=42.50 Aligned_cols=121 Identities=11% Similarity=0.095 Sum_probs=71.4
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC------cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK------DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~------~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
....+.|||.+.++|..+ |. ..|-|+=.+... .+...+.. .+..+.|.|++-.++-.+.|.
T Consensus 102 AAt~V~WsP~enkFAVgS---ga--r~isVcy~E~ENdWWVsKhikkPirS-tv~sldWhpnnVLlaaGs~D~------- 168 (361)
T KOG1523|consen 102 AATCVKWSPKENKFAVGS---GA--RLISVCYYEQENDWWVSKHIKKPIRS-TVTSLDWHPNNVLLAAGSTDG------- 168 (361)
T ss_pred ceeeEeecCcCceEEecc---Cc--cEEEEEEEecccceehhhhhCCcccc-ceeeeeccCCcceecccccCc-------
Confidence 367899999999998643 22 334444333322 11111222 235789999887666665433
Q ss_pred CcccccCCcEEEEEECCCCCCCC---------eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKD---------IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~---------~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.-+-...|+..+++..... .++.+.....++..++.|||+|..|++..++ +.+.+.|...
T Consensus 169 ----k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd----s~v~~~da~~ 237 (361)
T KOG1523|consen 169 ----KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD----STVSFVDAAG 237 (361)
T ss_pred ----ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC----CceEEeecCC
Confidence 1222245555665543211 1222222345688899999999999998754 5678888776
No 433
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=93.38 E-value=6.2 Score=47.22 Aligned_cols=109 Identities=10% Similarity=0.108 Sum_probs=65.2
Q ss_pred eeEEeCCCCcEEEEEEeCCCC-ceEEEEEEECCCCCc--ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGS-DWNTLHIKDVDTGKD--YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~-~~~~l~v~dl~~g~~--~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..++|-.||+++|.+.-.... ....|+||+-+ |+. ..+...+. ...++|-|.|..|+-+....
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gL-e~~l~WrPsG~lIA~~q~~~------------ 278 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGL-EGALSWRPSGNLIASSQRLP------------ 278 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCc-cCCccCCCCCCEEEEEEEcC------------
Confidence 358899999999988763322 36899999977 542 12223333 26899999999988876421
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
+ ...|......+-.-.. ..........-...+.|++|+..|++...
T Consensus 279 ~-~~~VvFfErNGLrhge-F~l~~~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 279 D-RHDVVFFERNGLRHGE-FTLRFDPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred C-CcEEEEEecCCcEeee-EecCCCCCCceeeEEEECCCCCEEEEEec
Confidence 1 1234433332211001 11111111224567999999999998763
No 434
>KOG0321|consensus
Probab=93.35 E-value=12 Score=40.96 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=43.0
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc--ccccc-ccCeeEEEcCCcEEEEEEE
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE--VLKNV-KFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~--~~~~~-~~~~~~wSpDg~~l~y~~~ 207 (734)
+...+-...|-| |+.+..+.. |+ .+++.||+++++.+-. .++.. ..-+.+|.|+..-+|.+..
T Consensus 99 H~nAifDl~wap-ge~~lVsas--GD--sT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGg 164 (720)
T KOG0321|consen 99 HKNAIFDLKWAP-GESLLVSAS--GD--STIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGG 164 (720)
T ss_pred ccceeEeeccCC-CceeEEEcc--CC--ceeeeeeeccceeecceeecccccccchhhhccCCCcceeecc
Confidence 345677899999 877665553 43 7899999998875432 22222 2357889999887776654
No 435
>PLN02606 palmitoyl-protein thioesterase
Probab=93.34 E-value=0.84 Score=45.91 Aligned_cols=100 Identities=15% Similarity=0.035 Sum_probs=55.4
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.+.|+||+ ||-......+++. .+.+++.. .|.-+.++. -|.+ . ++ ..-.+..+.+..+.+.|.+...
T Consensus 25 ~~~PvViw-HGlgD~~~~~~~~-~~~~~i~~~~~~pg~~v~-ig~~-~-----~~---s~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 25 LSVPFVLF-HGFGGECSNGKVS-NLTQFLINHSGYPGTCVE-IGNG-V-----QD---SLFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCCEEEE-CCCCcccCCchHH-HHHHHHHhCCCCCeEEEE-ECCC-c-----cc---ccccCHHHHHHHHHHHHhcchh
Confidence 45777666 9965444434433 34566652 255444444 2321 1 11 1112233445555666655333
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCC--ceeEEEE
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPE--LYGAALI 598 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~--~~~a~v~ 598 (734)
.. +-+-++|+|.||.+.=+++.+.|+ .++-.|+
T Consensus 93 L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlIS 127 (306)
T PLN02606 93 LS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVS 127 (306)
T ss_pred hc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEE
Confidence 32 358999999999999999988776 2444444
No 436
>KOG2100|consensus
Probab=93.29 E-value=21 Score=41.86 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=42.9
Q ss_pred EEeCCCCcEEEEEEeCCCC----ceEEEEEEECCCCC-cccccccccccCeeEEEcCCcEEEEEEEec
Q psy4818 147 YAFSDNGKHFAYCLSKSGS----DWNTLHIKDVDTGK-DYPEVLKNVKFPSISWTHDHKGFFYNQYCD 209 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~----~~~~l~v~dl~~g~-~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~ 209 (734)
..+|||.+++++..+..-. -....+++++.++. .......+..+.-+.|||.|+.|+|+...+
T Consensus 102 ~~~s~d~~~~~~~~~~~~~~rhs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~~n 169 (755)
T KOG2100|consen 102 DLISPDRKYILLGRNYKKRFRHSYTAKYHLYDLNTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLHNN 169 (755)
T ss_pred cccChhhhhheeccCcccccceeeEEEEEEEEcCCCCcccCcccCCCeeEEEEEcCCCCEEEEEEecc
Confidence 4889999999988764211 12356677887776 222223333346789999999999998754
No 437
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.00 E-value=11 Score=37.68 Aligned_cols=133 Identities=6% Similarity=0.002 Sum_probs=71.0
Q ss_pred CeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEE
Q psy4818 126 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFY 204 (734)
Q Consensus 126 ~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y 204 (734)
+.++.++..... +-+..+++.+|+||-+.|.-+.+ .+ .+|..++.++.-..+....+. +..++.|.-+|+.+ .
T Consensus 71 ~y~~~i~akpi~-g~~~nvS~LTynp~~rtLFav~n-~p---~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fv-i 144 (316)
T COG3204 71 EYRARIDAKPIL-GETANVSSLTYNPDTRTLFAVTN-KP---AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFV-I 144 (316)
T ss_pred CceEEEeccccc-cccccccceeeCCCcceEEEecC-CC---ceEEEEecCCceEEEecccccCChhHeEEecCCEEE-E
Confidence 445555544332 11233899999999997754433 22 467777765443222222221 23578888777522 2
Q ss_pred EEEecCCCCCCCCcccccCCcEEEEEECCCCCC----CC-eeEEec-CC-CCeeEEEEEEecCCcEEEEEEecCCCCceE
Q psy4818 205 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQD----KD-IPVVEF-PN-GRSLGLHSEVTDCGRYLLVSTSNNTQGSDL 277 (734)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~----~~-~~v~~~-~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i 277 (734)
+. + +.++++.+.++.+.. .. ..-.+. .. +. -+.+++|+|..+.+++...+ ....|
T Consensus 145 ~d--E-------------R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~-GfEGlA~d~~~~~l~~aKEr--~P~~I 206 (316)
T COG3204 145 VD--E-------------RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNK-GFEGLAWDPVDHRLFVAKER--NPIGI 206 (316)
T ss_pred Ee--h-------------hcceEEEEEEcCCccEEeccceEEeccccCCCCc-CceeeecCCCCceEEEEEcc--CCcEE
Confidence 22 1 234666666554321 00 011111 11 22 35689999999998876543 33577
Q ss_pred EEEeC
Q psy4818 278 HYFDL 282 (734)
Q Consensus 278 ~~~d~ 282 (734)
|.++.
T Consensus 207 ~~~~~ 211 (316)
T COG3204 207 FEVTQ 211 (316)
T ss_pred EEEec
Confidence 77763
No 438
>KOG1920|consensus
Probab=92.87 E-value=26 Score=41.76 Aligned_cols=123 Identities=21% Similarity=0.186 Sum_probs=65.9
Q ss_pred eeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC
Q psy4818 192 SISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN 271 (734)
Q Consensus 192 ~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 271 (734)
++.|--||+.++....... .+...+.+++... .-+ ...++. ......++|-|.|..|+-.....
T Consensus 200 ~IsWRgDg~~fAVs~~~~~-----------~~~RkirV~drEg-~Ln---s~se~~-~~l~~~LsWkPsgs~iA~iq~~~ 263 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESE-----------TGTRKIRVYDREG-ALN---STSEPV-EGLQHSLSWKPSGSLIAAIQCKT 263 (1265)
T ss_pred eEEEccCCcEEEEEEEecc-----------CCceeEEEecccc-hhh---cccCcc-cccccceeecCCCCeEeeeeecC
Confidence 4899999998887654321 1224566666552 111 111111 11334689999999998766543
Q ss_pred CCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 272 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 272 ~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
+ .++|..+.-.+...+.++-..+. +...... .|..+++-|++.+.. ..+..|.+|.+.+
T Consensus 264 s-d~~IvffErNGL~hg~f~l~~p~-----de~~ve~L~Wns~sdiLAv~~~~-~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 264 S-DSDIVFFERNGLRHGEFVLPFPL-----DEKEVEELAWNSNSDILAVVTSN-LENSLVQLWTTGN 323 (1265)
T ss_pred C-CCcEEEEecCCccccccccCCcc-----cccchheeeecCCCCceeeeecc-cccceEEEEEecC
Confidence 3 35788888776433322211111 1111112 388888877765543 2334466666543
No 439
>KOG0269|consensus
Probab=92.85 E-value=1.2 Score=49.45 Aligned_cols=118 Identities=12% Similarity=0.100 Sum_probs=75.3
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC--cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~--~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
++..+.|||--....++..++| .|.+||+.--. .++.+.....+.-..|+|++.+|+-...|
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRD------------ 241 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRD------------ 241 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCC------------
Confidence 4778999997766666666665 58899986432 12223333333568999988877765532
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.+|.+|+.++.........+.. . -..-+.|-|+-++.+-+.+... ...|++||+.-
T Consensus 242 ----K~vkiWd~t~~~~~~~~tInTi-a--pv~rVkWRP~~~~hLAtcsmv~-dtsV~VWDvrR 297 (839)
T KOG0269|consen 242 ----KMVKIWDMTDSRAKPKHTINTI-A--PVGRVKWRPARSYHLATCSMVV-DTSVHVWDVRR 297 (839)
T ss_pred ----ccEEEEeccCCCccceeEEeec-c--eeeeeeeccCccchhhhhhccc-cceEEEEeecc
Confidence 2788888887655444333321 1 2346889999887664443322 26899999976
No 440
>KOG1538|consensus
Probab=92.84 E-value=2.5 Score=46.12 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=38.6
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEE
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELI 318 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~ 318 (734)
-+.++++-|||..|++.+. ++++++|...| .....+..+.+..+.+ |+.||++++
T Consensus 14 ci~d~afkPDGsqL~lAAg-----~rlliyD~ndG--------~llqtLKgHKDtVycVAys~dGkrFA 69 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-----SRLLVYDTSDG--------TLLQPLKGHKDTVYCVAYAKDGKRFA 69 (1081)
T ss_pred chheeEECCCCceEEEecC-----CEEEEEeCCCc--------ccccccccccceEEEEEEccCCceec
Confidence 3456899999999987542 68999999884 2334444444545554 899988765
No 441
>KOG0292|consensus
Probab=92.75 E-value=15 Score=42.03 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=130.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc---ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP---EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~---~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..+.+++|.|.--+|.-+.. + ..|.+||-.=|..+. +..+.+ .++.|.|++- ||.+.-|
T Consensus 10 sRvKglsFHP~rPwILtslH-s----G~IQlWDYRM~tli~rFdeHdGpV--Rgv~FH~~qp-lFVSGGD---------- 71 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLH-S----GVIQLWDYRMGTLIDRFDEHDGPV--RGVDFHPTQP-LFVSGGD---------- 71 (1202)
T ss_pred ccccceecCCCCCEEEEeec-C----ceeeeehhhhhhHHhhhhccCCcc--ceeeecCCCC-eEEecCC----------
Confidence 45788999999999987664 3 358888876665433 233433 5889999874 4443322
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
...|.+|+..+ .+++|+...+..++..+.|.+.=-||+ +.++...|.+|+..+.. ..-.
T Consensus 72 -----DykIkVWnYk~----rrclftL~GHlDYVRt~~FHheyPWIl----SASDDQTIrIWNwqsr~--------~iav 130 (1202)
T KOG0292|consen 72 -----DYKIKVWNYKT----RRCLFTLLGHLDYVRTVFFHHEYPWIL----SASDDQTIRIWNWQSRK--------CIAV 130 (1202)
T ss_pred -----ccEEEEEeccc----ceehhhhccccceeEEeeccCCCceEE----EccCCCeEEEEeccCCc--------eEEE
Confidence 24677777654 457787777777888888888877876 22334678888887721 1222
Q ss_pred eeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCc---------------eEeecCCCCce--------
Q psy4818 299 VIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW---------------KTLIPEDENRT-------- 354 (734)
Q Consensus 299 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~---------------~~l~~~~~~~~-------- 354 (734)
++.+....-. .|.|-.+.++ ...- +..|-+||+.+-...+. ..|+.+. +.+
T Consensus 131 ltGHnHYVMcAqFhptEDlIV-SaSL---DQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~-DaVVK~VLEGH 205 (1202)
T KOG0292|consen 131 LTGHNHYVMCAQFHPTEDLIV-SASL---DQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQT-DAVVKHVLEGH 205 (1202)
T ss_pred EecCceEEEeeccCCccceEE-Eecc---cceEEEEeecchhccCCCCCCchhhhhccccchhhcCCc-Ceeeeeeeccc
Confidence 3322211111 2666545333 3222 45677888765221000 0122111 111
Q ss_pred ---eEEEEEeeCCEEEEEEEeCCceeEEEEECCCCce--eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 355 ---LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR--LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 355 ---~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~--~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++.+..---++++..++ .++.+|..+.-+. +.....+.+.|+++-+.|..+ ++++.+.. ..+.+||+
T Consensus 206 DRGVNwaAfhpTlpliVSG~DD--RqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~-lIlSnsED---ksirVwDm 279 (1202)
T KOG0292|consen 206 DRGVNWAAFHPTLPLIVSGADD--RQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQD-LILSNSED---KSIRVWDM 279 (1202)
T ss_pred ccccceEEecCCcceEEecCCc--ceeeEEEeccccceeehhhhcccCCcceEEecCccc-eeEecCCC---ccEEEEec
Confidence 2233332212356665555 3455555432222 122233455666777777653 55554433 36788888
No 442
>KOG0649|consensus
Probab=92.52 E-value=7.8 Score=37.21 Aligned_cols=61 Identities=15% Similarity=0.230 Sum_probs=40.0
Q ss_pred eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+.+++.. |...+|.||+++|+..+.+......+..+.......+++ +. ..-+.+.++|.
T Consensus 125 ~enSi~~Ag---GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qil-sG---~EDGtvRvWd~ 185 (325)
T KOG0649|consen 125 SENSILFAG---GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQIL-SG---AEDGTVRVWDT 185 (325)
T ss_pred CCCcEEEec---CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCccee-ec---CCCccEEEEec
Confidence 346666654 557999999999998888887755565665533333443 22 22356788888
No 443
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.49 E-value=17 Score=38.75 Aligned_cols=109 Identities=20% Similarity=0.196 Sum_probs=57.7
Q ss_pred CcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC
Q psy4818 261 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE 340 (734)
Q Consensus 261 G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 340 (734)
+..+++.... ..++.+|+++|+ ..|..-. ........+++++|+.+. +..|+.+|.++++.
T Consensus 241 ~~~vy~~~~~----g~l~a~d~~tG~-------~~W~~~~----~~~~~p~~~~~~vyv~~~----~G~l~~~d~~tG~~ 301 (377)
T TIGR03300 241 GGQVYAVSYQ----GRVAALDLRSGR-------VLWKRDA----SSYQGPAVDDNRLYVTDA----DGVVVALDRRSGSE 301 (377)
T ss_pred CCEEEEEEcC----CEEEEEECCCCc-------EEEeecc----CCccCceEeCCEEEEECC----CCeEEEEECCCCcE
Confidence 4455543322 478999988742 1222111 111113345777887653 35699999987641
Q ss_pred CCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC
Q psy4818 341 KNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 395 (734)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~ 395 (734)
.|+. ............. .++.+++.. .+ ..|+.+|..+|+.+.++..+
T Consensus 302 -~W~~--~~~~~~~~ssp~i-~g~~l~~~~-~~--G~l~~~d~~tG~~~~~~~~~ 349 (377)
T TIGR03300 302 -LWKN--DELKYRQLTAPAV-VGGYLVVGD-FE--GYLHWLSREDGSFVARLKTD 349 (377)
T ss_pred -EEcc--ccccCCccccCEE-ECCEEEEEe-CC--CEEEEEECCCCCEEEEEEcC
Confidence 2321 0111111222222 336666543 34 47999999899987666544
No 444
>KOG0276|consensus
Probab=92.46 E-value=20 Score=39.40 Aligned_cols=220 Identities=11% Similarity=0.076 Sum_probs=120.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
-.+.++.+.|-.-++.-+.- +| ++.+||-+|...+. .......+.+..|-+--++|+..++|
T Consensus 14 dRVKsVd~HPtePw~la~Ly-nG----~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD------------ 76 (794)
T KOG0276|consen 14 DRVKSVDFHPTEPWILAALY-NG----DVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDD------------ 76 (794)
T ss_pred CceeeeecCCCCceEEEeee-cC----eeEEEecccceeeeeeeecccchhhheeeeccceEEEecCC------------
Confidence 34778889999988876664 33 57788877765432 11222222345565656667666543
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+|.+.+.+|.. .+..|+. ++.++..++..|.--+++- + ++...|.+||-+.+ ....+.+
T Consensus 77 ----~~IrVfnynt~e--kV~~FeA--H~DyIR~iavHPt~P~vLt-s---SDDm~iKlW~we~~--------wa~~qtf 136 (794)
T KOG0276|consen 77 ----MQIRVFNYNTGE--KVKTFEA--HSDYIRSIAVHPTLPYVLT-S---SDDMTIKLWDWENE--------WACEQTF 136 (794)
T ss_pred ----ceEEEEecccce--eeEEeec--cccceeeeeecCCCCeEEe-c---CCccEEEEeeccCc--------eeeeeEE
Confidence 268888888764 4556654 5668889999998888762 2 23356777777661 2222233
Q ss_pred ccccceEE-E-EEecC-CeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 301 PGMDHHHE-I-IANNG-PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 301 ~~~~~~~~-~-~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
.+...-.. . +.|.. .+++ .+.. +..+-+|.+.++.+ -..+-.+. ..+-.--....+++-|+.+..+. ..
T Consensus 137 eGH~HyVMqv~fnPkD~ntFa-S~sL---DrTVKVWslgs~~~--nfTl~gHe-kGVN~Vdyy~~gdkpylIsgaDD-~t 208 (794)
T KOG0276|consen 137 EGHEHYVMQVAFNPKDPNTFA-SASL---DRTVKVWSLGSPHP--NFTLEGHE-KGVNCVDYYTGGDKPYLISGADD-LT 208 (794)
T ss_pred cCcceEEEEEEecCCCcccee-eeec---cccEEEEEcCCCCC--ceeeeccc-cCcceEEeccCCCcceEEecCCC-ce
Confidence 32221111 1 55543 3333 2221 33477777755432 23444443 22322222233344444333332 46
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCc
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRR 406 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~ 406 (734)
+.+||..+...++.|..+...|+.+.+.|
T Consensus 209 iKvWDyQtk~CV~TLeGHt~Nvs~v~fhp 237 (794)
T KOG0276|consen 209 IKVWDYQTKSCVQTLEGHTNNVSFVFFHP 237 (794)
T ss_pred EEEeecchHHHHHHhhcccccceEEEecC
Confidence 88999987777777776544454444443
No 445
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.40 E-value=0.14 Score=49.81 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=18.4
Q ss_pred CCcEEEEEcChHHHHHHHHHh
Q psy4818 567 PKYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~ 587 (734)
..+|.++|||+||.++-.++.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 358999999999999988876
No 446
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=92.40 E-value=0.49 Score=59.86 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=61.0
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.++++||+.+... .|.. +...|. .++.|+.++.+|.+.. ......++++.+.+...+.... ..
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~-l~~~l~-~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~-~~ 1132 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSV-LSRYLD-PQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQ-PH 1132 (1296)
T ss_pred CCCeEEecCCCCchH--HHHH-HHHhcC-CCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhC-CC
Confidence 466888899766542 3332 344555 3799999999884321 1112345555544333332211 12
Q ss_pred CcEEEEEcChHHHHHHHHHhc---CCCceeEEEEcCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQ---RPELYGAALILVG 601 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~ 601 (734)
.+..++|||+||.++..++.+ .++....+++..+
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 479999999999999999874 4676666665543
No 447
>KOG0649|consensus
Probab=92.31 E-value=3.5 Score=39.48 Aligned_cols=74 Identities=11% Similarity=0.138 Sum_probs=47.5
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCcee
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~ 389 (734)
..|....+++.. ++..+|.+|++++. ++..+.+. .+.+-.+.....+.-+++..++| .+.+||+++++..
T Consensus 122 ldP~enSi~~Ag----GD~~~y~~dlE~G~---i~r~~rGH-tDYvH~vv~R~~~~qilsG~EDG--tvRvWd~kt~k~v 191 (325)
T KOG0649|consen 122 LDPSENSILFAG----GDGVIYQVDLEDGR---IQREYRGH-TDYVHSVVGRNANGQILSGAEDG--TVRVWDTKTQKHV 191 (325)
T ss_pred eccCCCcEEEec----CCeEEEEEEecCCE---EEEEEcCC-cceeeeeeecccCcceeecCCCc--cEEEEecccccee
Confidence 566667777643 45679999999887 56666655 23333333322233455666664 6889999999876
Q ss_pred eeeC
Q psy4818 390 HSFP 393 (734)
Q Consensus 390 ~~l~ 393 (734)
+.|.
T Consensus 192 ~~ie 195 (325)
T KOG0649|consen 192 SMIE 195 (325)
T ss_pred EEec
Confidence 6653
No 448
>PRK13614 lipoprotein LpqB; Provisional
Probab=92.16 E-value=17 Score=40.81 Aligned_cols=169 Identities=10% Similarity=0.023 Sum_probs=87.3
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
.+..+++|+||+.+|+... +...+++... |...+....+.....++|.++| +++-... .
T Consensus 344 ~~~s~avS~~g~~~A~~~~----~~~~l~~~~~--g~~~~~~~~g~~Lt~PS~d~~g-~vWtv~~-g------------- 402 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNG----SRTTLYTVSP--GQPARALTSGSTLTRPSFSPQD-WVWTAGP-G------------- 402 (573)
T ss_pred cccceeecCCCceEEEecC----CCcEEEEecC--CCcceeeecCCCccCCcccCCC-CEEEeeC-C-------------
Confidence 4678999999999999732 2246776654 2222222333334788999988 5654332 1
Q ss_pred CCcEEEEEECC-CCCCC--CeeEE--ecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC---CCCCcccCCC
Q psy4818 223 MGQKIYYHVLG-TEQDK--DIPVV--EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS---LPDGKISGKF 294 (734)
Q Consensus 223 ~~~~l~~~~l~-t~~~~--~~~v~--~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~---~~~~~l~~~~ 294 (734)
.+..|.+..-. ++... .+... ...+. .-+..+..|+||-.+++....+. ..+|++.-+.. |....|+.
T Consensus 403 ~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g-~~I~~lrvSrDG~R~Avi~~~~g-~~~V~va~V~R~~~G~P~~L~~-- 478 (573)
T PRK13614 403 GNGRIVAYRPTGVAEGAQAPTVTLTADWLAG-RTVKELRVSREGVRALVISEQNG-KSRVQVAGIVRNEDGTPRELTA-- 478 (573)
T ss_pred CCceEEEEecCCCcccccccceeecccccCC-CeeEEEEECCCccEEEEEEEeCC-ccEEEEEEEEeCCCCCeEEccC--
Confidence 12244443321 21110 00011 11111 13678999999999998875433 24577644322 11112211
Q ss_pred CceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 295 PLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 295 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
...+.. ...... .|..+ ..|++++...+.+..++++.+..+.
T Consensus 479 -~~~~~~-~~~~~sl~W~~~-~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 479 -PITLAA-DSDADTGAWVGD-STVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred -ceeccc-CCCcceeEEcCC-CEEEEEeccCCCcceEEEEEeCCCC
Confidence 111111 111222 27665 4577776554556667888885443
No 449
>KOG0268|consensus
Probab=92.03 E-value=1.6 Score=44.15 Aligned_cols=133 Identities=11% Similarity=0.138 Sum_probs=69.8
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
.|.+.++.+..+-..++..... ..++|+| ..+.+..+++ ...+|++|+.... .++..-.+....
T Consensus 211 sIvLyD~R~~~Pl~KVi~~mRT-----N~IswnP-eafnF~~a~E---D~nlY~~DmR~l~-------~p~~v~~dhvsA 274 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVILTMRT-----NTICWNP-EAFNFVAANE---DHNLYTYDMRNLS-------RPLNVHKDHVSA 274 (433)
T ss_pred ceEEEecccCCccceeeeeccc-----cceecCc-cccceeeccc---cccceehhhhhhc-------ccchhhccccee
Confidence 6788888776654444544322 2589999 5565554433 3679999987621 121111111112
Q ss_pred eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 306 HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 306 ~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
...+ +||-|+.|+-.+- +-.|-.+.+..+.. +++.....-..+-.+.+.-+.+.+++.++++ .+.+|.-
T Consensus 275 V~dVdfsptG~Efvsgsy----DksIRIf~~~~~~S---RdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~--nvRlWka 344 (433)
T KOG0268|consen 275 VMDVDFSPTGQEFVSGSY----DKSIRIFPVNHGHS---RDIYHTKRMQHVFCVKYSMDSKYIISGSDDG--NVRLWKA 344 (433)
T ss_pred EEEeccCCCcchhccccc----cceEEEeecCCCcc---hhhhhHhhhheeeEEEEeccccEEEecCCCc--ceeeeec
Confidence 2223 8999998773322 22355555544331 3333322112233344454477888877775 4556644
No 450
>KOG4328|consensus
Probab=92.00 E-value=18 Score=38.15 Aligned_cols=204 Identities=8% Similarity=0.073 Sum_probs=108.6
Q ss_pred EEEeeEEeCCCCc-EEEEEEeCCCCceEEEEEEECCCCCccc-----ccccccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDVDTGKDYP-----EVLKNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPDG~-~la~~~~~~g~~~~~l~v~dl~~g~~~~-----~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
..+...+|.|-.. .|+-+-+.. .+|-+||+.+.+.-. .+.....++.+.|+|-...-+|.+.-
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~----G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy------- 255 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKG----GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSY------- 255 (498)
T ss_pred cceEEEEecccCcceEEEEccCC----CcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeecc-------
Confidence 4577899999887 555444444 479999996443211 12333345788999977655555432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
...|.+.++.+...+. ++...++..++.+..++-+...+++..+- ...-++|+.++... -
T Consensus 256 --------DGtiR~~D~~~~i~e~--v~s~~~d~~~fs~~d~~~e~~~vl~~~~~----G~f~~iD~R~~~s~------~ 315 (498)
T KOG4328|consen 256 --------DGTIRLQDFEGNISEE--VLSLDTDNIWFSSLDFSAESRSVLFGDNV----GNFNVIDLRTDGSE------Y 315 (498)
T ss_pred --------CceeeeeeecchhhHH--HhhcCccceeeeeccccCCCccEEEeecc----cceEEEEeecCCcc------c
Confidence 1268888888776543 33333345577888898888887775433 24556777662211 0
Q ss_pred ceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCC--CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP--CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
+...........-.+.|--.+++..+. .+..+..||+..- +.+.+.-.+++. ..+....+.+.++. +++...+
T Consensus 316 ~~~~lh~kKI~sv~~NP~~p~~laT~s---~D~T~kIWD~R~l~~K~sp~lst~~Hr-rsV~sAyFSPs~gt-l~TT~~D 390 (498)
T KOG4328|consen 316 ENLRLHKKKITSVALNPVCPWFLATAS---LDQTAKIWDLRQLRGKASPFLSTLPHR-RSVNSAYFSPSGGT-LLTTCQD 390 (498)
T ss_pred hhhhhhhcccceeecCCCCchheeecc---cCcceeeeehhhhcCCCCcceeccccc-ceeeeeEEcCCCCc-eEeeccC
Confidence 111111111111124555444443332 2344667887642 211122233333 23333334444455 5555554
Q ss_pred CceeEEEEEC
Q psy4818 374 VRSVMDLHDL 383 (734)
Q Consensus 374 ~~~~l~~~dl 383 (734)
..|.+||-
T Consensus 391 --~~IRv~ds 398 (498)
T KOG4328|consen 391 --NEIRVFDS 398 (498)
T ss_pred --CceEEeec
Confidence 56788875
No 451
>KOG1007|consensus
Probab=91.98 E-value=1.8 Score=42.49 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=78.4
Q ss_pred CcEEEeeEEeCC--CCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc---ccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 140 GTTALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV---KFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 140 ~~~~~~~~~~SP--DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~---~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
+...+.+-+||| ||..+|-..+ .+|+-||+.|.+..- .+... ....+.+.|+-+.++.+..|+
T Consensus 169 ~~~~ftsg~WspHHdgnqv~tt~d------~tl~~~D~RT~~~~~-sI~dAHgq~vrdlDfNpnkq~~lvt~gDd----- 236 (370)
T KOG1007|consen 169 MRHSFTSGAWSPHHDGNQVATTSD------STLQFWDLRTMKKNN-SIEDAHGQRVRDLDFNPNKQHILVTCGDD----- 236 (370)
T ss_pred ccceecccccCCCCccceEEEeCC------CcEEEEEccchhhhc-chhhhhcceeeeccCCCCceEEEEEcCCC-----
Confidence 456677889999 9999886553 469999998765321 12222 235678889887777666443
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeC
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~ 282 (734)
..|.+|+...... .+++.+++..|...+.+.|--..|+++.++. +.+-+.-.
T Consensus 237 ----------gyvriWD~R~tk~---pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD---s~V~Lsca 288 (370)
T KOG1007|consen 237 ----------GYVRIWDTRKTKF---PVQELPGHSHWVWAVRFNPEHDQLILSGGSD---SAVNLSCA 288 (370)
T ss_pred ----------ccEEEEeccCCCc---cccccCCCceEEEEEEecCccceEEEecCCC---ceeEEEec
Confidence 2577787765432 4667778888999999999999998876442 44444443
No 452
>KOG2111|consensus
Probab=91.81 E-value=0.71 Score=45.77 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred CCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc---ccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 138 KDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV---KFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 138 ~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~---~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
+.+...+..++++-+|..||-++..+ .-|+++|..+|+.+.+...++ ....++||||+++|+..++..
T Consensus 178 ~AH~s~Iacv~Ln~~Gt~vATaStkG----TLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg----- 248 (346)
T KOG2111|consen 178 NAHDSDIACVALNLQGTLVATASTKG----TLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG----- 248 (346)
T ss_pred EcccCceeEEEEcCCccEEEEeccCc----EEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC-----
Q ss_pred CCCcccccCCcEEEEEEC
Q psy4818 215 DGTETTAHMGQKIYYHVL 232 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l 232 (734)
.|++..+
T Consensus 249 -----------TlHiF~l 255 (346)
T KOG2111|consen 249 -----------TLHIFSL 255 (346)
T ss_pred -----------eEEEEEe
No 453
>KOG4227|consensus
Probab=91.71 E-value=5.1 Score=40.86 Aligned_cols=117 Identities=22% Similarity=0.231 Sum_probs=73.4
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC------Cccccc--ccccccCeeEEEcCCcEEEEEEEecCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG------KDYPEV--LKNVKFPSISWTHDHKGFFYNQYCDING 212 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g------~~~~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~ 212 (734)
+.-+..+.||.+|++|| +|.+.....||+++.- +++... ....++..++|.- +.+++|...
T Consensus 56 ~GCiNAlqFS~N~~~L~-----SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~----- 124 (609)
T KOG4227|consen 56 TGCINALQFSHNDRFLA-----SGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGE----- 124 (609)
T ss_pred ccccceeeeccCCeEEe-----ecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCC-----
Confidence 33467899999999998 4556678888887532 222211 1112335566743 456666542
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
+..+|..|++.+.+. +-|+...++.+-++....+|-...++.++ ....+.+||...
T Consensus 125 ----------~~~~VI~HDiEt~qs--i~V~~~~~~~~~VY~m~~~P~DN~~~~~t----~~~~V~~~D~Rd 180 (609)
T KOG4227|consen 125 ----------RWGTVIKHDIETKQS--IYVANENNNRGDVYHMDQHPTDNTLIVVT----RAKLVSFIDNRD 180 (609)
T ss_pred ----------CcceeEeeeccccee--eeeecccCcccceeecccCCCCceEEEEe----cCceEEEEeccC
Confidence 234799999998763 45666655555667788888766555432 225778888766
No 454
>KOG0274|consensus
Probab=91.69 E-value=6.1 Score=44.04 Aligned_cols=184 Identities=15% Similarity=0.099 Sum_probs=95.5
Q ss_pred CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEE
Q psy4818 164 GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 243 (734)
Q Consensus 164 g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~ 243 (734)
|+...+|+||++++|+.+....+.. ..--+-.-++..++..+.+. .|.+|++.+.+ ++.
T Consensus 307 gs~D~tVkVW~v~n~~~l~l~~~h~-~~V~~v~~~~~~lvsgs~d~----------------~v~VW~~~~~~----cl~ 365 (537)
T KOG0274|consen 307 GSRDNTVKVWDVTNGACLNLLRGHT-GPVNCVQLDEPLLVSGSYDG----------------TVKVWDPRTGK----CLK 365 (537)
T ss_pred ccCCceEEEEeccCcceEEEecccc-ccEEEEEecCCEEEEEecCc----------------eEEEEEhhhce----eee
Confidence 5667899999999998765443221 11123334566666666532 57777776543 344
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCC
Q psy4818 244 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTK 323 (734)
Q Consensus 244 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~ 323 (734)
....+...+..+. .|+....+..+ ....|.+||+.++. +++ ..+. +...........++ +++....
T Consensus 366 sl~gH~~~V~sl~--~~~~~~~~Sgs---~D~~IkvWdl~~~~-~c~------~tl~-~h~~~v~~l~~~~~-~Lvs~~a 431 (537)
T KOG0274|consen 366 SLSGHTGRVYSLI--VDSENRLLSGS---LDTTIKVWDLRTKR-KCI------HTLQ-GHTSLVSSLLLRDN-FLVSSSA 431 (537)
T ss_pred eecCCcceEEEEE--ecCcceEEeee---eccceEeecCCchh-hhh------hhhc-CCcccccccccccc-eeEeccc
Confidence 4334454555554 45523334332 22679999999831 111 1111 11111111223333 3333332
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
...|..||...++ ....+...+...+..+... +..++.+..++ .+.+||+.+|+..+.+
T Consensus 432 ---D~~Ik~WD~~~~~---~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~--~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 432 ---DGTIKLWDAEEGE---CLRTLEGRHVGGVSALALG--KEEILCSSDDG--SVKLWDLRSGTLIRTL 490 (537)
T ss_pred ---cccEEEeecccCc---eeeeeccCCcccEEEeecC--cceEEEEecCC--eeEEEecccCchhhhh
Confidence 3368889988766 3444444212222323222 35566666664 6777899888876554
No 455
>KOG4532|consensus
Probab=91.61 E-value=6.6 Score=38.26 Aligned_cols=128 Identities=11% Similarity=0.047 Sum_probs=69.8
Q ss_pred EEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceE
Q psy4818 252 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKV 330 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l 330 (734)
..+.++|+|+++++.+.. ..+|+++.++. ....+. -..+....+.++. .|+.....+++.+.. +.+
T Consensus 161 ~ns~~~snd~~~~~~Vgd----s~~Vf~y~id~-~sey~~----~~~~a~t~D~gF~~S~s~~~~~FAv~~Qd----g~~ 227 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGD----SRRVFRYAIDD-ESEYIE----NIYEAPTSDHGFYNSFSENDLQFAVVFQD----GTC 227 (344)
T ss_pred eeeeEEcCCCceEEEecC----CCcceEEEeCC-ccceee----eeEecccCCCceeeeeccCcceEEEEecC----CcE
Confidence 346899999999986542 36788887776 222110 0112222233444 387776666665543 347
Q ss_pred EEEecCCCCCCCceEee--cCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 331 VTINLNNPCEKNWKTLI--PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 331 ~~~d~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
..+|+..-.. ...... .+.....+..+.+.-.+-+-+..-..+.+.+.+.|+.+++..+.|-
T Consensus 228 ~I~DVR~~~t-pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 228 AIYDVRNMAT-PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred EEEEeccccc-chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 7888764220 011111 1223445566655533332222223456789999998888655554
No 456
>KOG1963|consensus
Probab=91.60 E-value=2.5 Score=47.65 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=72.5
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEE-CC-CCCccc-ccccc--cccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD-VD-TGKDYP-EVLKN--VKFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~d-l~-~g~~~~-~~~~~--~~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
+.+.+...++||.|+++|-+-++ | +|.||. .. .+...+ ....+ .....++||+||.+|+-...
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~d-G----rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~------- 271 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSD-G----RILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGR------- 271 (792)
T ss_pred hcccceeEEeccccceEEEeccC-C----cEEEEeccccccccccceEEEecccccceeEEecCCceEeeccc-------
Confidence 44556779999999999965443 3 477665 33 122221 12222 24578999999987765432
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
-.-+.+|.++|+..+ .+ |.-..-+..+.+|||+..-++... .+.|.++.+.+
T Consensus 272 ---------E~VLv~Wq~~T~~kq-fL----PRLgs~I~~i~vS~ds~~~sl~~~----DNqI~li~~~d 323 (792)
T KOG1963|consen 272 ---------EGVLVLWQLETGKKQ-FL----PRLGSPILHIVVSPDSDLYSLVLE----DNQIHLIKASD 323 (792)
T ss_pred ---------ceEEEEEeecCCCcc-cc----cccCCeeEEEEEcCCCCeEEEEec----CceEEEEeccc
Confidence 125788999988632 22 222235678899999998776543 26777777654
No 457
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=91.54 E-value=0.27 Score=52.54 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=50.6
Q ss_pred HHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC
Q psy4818 510 RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR 589 (734)
Q Consensus 510 ~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~ 589 (734)
+.+.|.+.||..- .+++| .+-+|+.+.. ....-+..+...++.+.+.. -.+|.|+||||||+++...+...
T Consensus 70 li~~L~~~GY~~~-~~l~~---~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 70 LIENLEKLGYDRG-KDLFA---APYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHhcCcccC-CEEEE---Eeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhc
Confidence 4566777787642 12333 3335555432 11223455555666555432 57899999999999999998876
Q ss_pred CC------ceeEEEEcCC
Q psy4818 590 PE------LYGAALILVG 601 (734)
Q Consensus 590 p~------~~~a~v~~~~ 601 (734)
+. .+++.|+.++
T Consensus 141 ~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 141 PQEEWKDKYIKRFISIGT 158 (389)
T ss_pred cchhhHHhhhhEEEEeCC
Confidence 43 3566776554
No 458
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.43 E-value=0.33 Score=53.21 Aligned_cols=70 Identities=16% Similarity=0.280 Sum_probs=53.1
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHhhhCCC-CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 654 TLVLTGDHDDRVPPLHSYKFIATLQEKIGSL-PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 654 ~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
||+.||..|..|++..+..+++++.+..... ..-..-++|.+.||.+|-.........+.+..+.+|+++
T Consensus 356 LI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 356 LILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred EEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 9999999999999999999999998873210 000224689999999998765533345777778888885
No 459
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.35 E-value=0.74 Score=34.49 Aligned_cols=51 Identities=14% Similarity=0.088 Sum_probs=28.8
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEecc--ccCCCCCcEEEEecCCCCCcCCc
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVG--ALRNRRNPVIIYGYGGYGVSVLP 504 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~--~~~~~~~P~vv~~hGg~~~~~~~ 504 (734)
..+|.+|...+++.||.-+.+.=+.++. ....++.|+|++.||-..++..+
T Consensus 7 ~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 7 KHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp HTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred HcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3577899999999999877776665544 23456789999999987776543
No 460
>PRK13615 lipoprotein LpqB; Provisional
Probab=91.29 E-value=16 Score=40.69 Aligned_cols=167 Identities=11% Similarity=0.038 Sum_probs=86.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++++|+||+.+|+... . ..+++....+.. .. .........++|.++| +++-.. +. .
T Consensus 336 ~~s~avS~dg~~~A~v~~-~----~~l~vg~~~~~~-~~-~~~~~~Lt~PS~d~~g-~vWtv~-~g-------------~ 393 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA-S----GVWSVGDGDRDA-VL-LDTRPGLVAPSLDAQG-YVWSTP-AS-------------D 393 (557)
T ss_pred cccceEcCCCceEEEEcC-C----ceEEEecCCCcc-ee-eccCCccccCcCcCCC-CEEEEe-CC-------------C
Confidence 467899999999999843 1 267776554222 11 1222234688999988 565433 21 1
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC--CCCCcccCCCCceeeec
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS--LPDGKISGKFPLKTVIP 301 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~~~l~~ 301 (734)
...+.... .++... ..-..... ..-+..+..|+||-.+++..... ...+|++.-+.. +....|+ ...+.+..
T Consensus 394 ~~~l~~~~-~~G~~~-~v~v~~~~-~~~I~~lrvSrDG~R~Avi~~~~-g~~~V~va~V~R~~~~P~~L~--~~p~~l~~ 467 (557)
T PRK13615 394 PRGLVAWG-PDGVGH-PVAVSWTA-TGRVVSLEVARDGARVLVQLETG-AGPQLLVASIVRDGGVPTSLT--TTPLELLA 467 (557)
T ss_pred ceEEEEec-CCCceE-EeeccccC-CCeeEEEEeCCCccEEEEEEecC-CCCEEEEEEEEeCCCcceEee--eccEEccc
Confidence 12222221 111111 11111111 22467899999999999887643 334666643322 1111221 11122222
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
........ |..+ ..|++++...+.+..++.+.+.++.
T Consensus 468 ~l~~v~sl~W~~~-~~laVl~~~~~~~~~v~~v~v~g~~ 505 (557)
T PRK13615 468 SPGTPLDATWVDE-LDVATLTLAPDGERQVELHQVGGPS 505 (557)
T ss_pred CcCcceeeEEcCC-CEEEEEeccCCCCceEEEEECCCcc
Confidence 22222222 7765 4577776444555678999988654
No 461
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=91.16 E-value=21 Score=37.15 Aligned_cols=148 Identities=15% Similarity=0.044 Sum_probs=78.3
Q ss_pred eeEEEEEeCCCCCeEEEeCCCCcC-------C-CCcEEEeeEEeCCCCcEEEEEEeCC----CCc-------eEEEEEEE
Q psy4818 114 HSILYVQRNLTGSTEVFLDPNKLS-------K-DGTTALKLYAFSDNGKHFAYCLSKS----GSD-------WNTLHIKD 174 (734)
Q Consensus 114 ~~~l~~~~~~~g~~~~l~d~~~~~-------~-~~~~~~~~~~~SPDG~~la~~~~~~----g~~-------~~~l~v~d 174 (734)
.+.|++.+..+...+.+-=|..+. . ....++.+++++|||+.|..+.... |.. ...|+.+|
T Consensus 111 ~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d 190 (326)
T PF13449_consen 111 PPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYD 190 (326)
T ss_pred CCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEec
Confidence 467888775432223331244331 1 1345688999999999766655332 211 25678888
Q ss_pred CCC-CCc-----ccccc-----cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC-------
Q psy4818 175 VDT-GKD-----YPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ------- 236 (734)
Q Consensus 175 l~~-g~~-----~~~~~-----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~------- 236 (734)
..+ |+. .+... .....+.+.+-+|++.|+.-+.-.. ......+||.+++....
T Consensus 191 ~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~---------~~~~~~ri~~v~l~~at~~~~~~~ 261 (326)
T PF13449_consen 191 PKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSP---------GTGNYKRIYRVDLSDATDVPGIES 261 (326)
T ss_pred CCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCC---------CccceEEEEEEEcccccccccccc
Confidence 876 422 11111 2334578999999985554443211 01234578888775331
Q ss_pred --------CCCeeEEecCCC---CeeEEEEEEec--CCcEEEEEEec
Q psy4818 237 --------DKDIPVVEFPNG---RSLGLHSEVTD--CGRYLLVSTSN 270 (734)
Q Consensus 237 --------~~~~~v~~~~~~---~~~~~~~~~Sp--DG~~l~~~~~~ 270 (734)
....++++.... ...+.+++|-| ||+..++..++
T Consensus 262 l~~~~~~~~~k~ll~d~~~~g~~~dn~EGma~~p~~~g~~~l~lvsD 308 (326)
T PF13449_consen 262 LEGADIKPVKKELLFDLSPLGLPIDNFEGMAVGPRLDGRRTLYLVSD 308 (326)
T ss_pred cccccccccccccccccccccCccCceeeEEEeeccCCCEEEEEEEC
Confidence 111223322111 23456788876 77775555544
No 462
>KOG0650|consensus
Probab=91.12 E-value=9.8 Score=41.34 Aligned_cols=111 Identities=16% Similarity=0.189 Sum_probs=61.6
Q ss_pred EEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-E-EEecCCeEEEEeCCCCCCce
Q psy4818 252 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-I-IANNGPELIVKTTKNAPKGK 329 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~-~s~dg~~l~~~s~~~~~~~~ 329 (734)
+.++.|.-+|.||+.+...+ ....|++..+.....+ .+++. ..+... . |.|-..++++.+.+ .
T Consensus 524 i~~vtWHrkGDYlatV~~~~-~~~~VliHQLSK~~sQ-----~PF~k----skG~vq~v~FHPs~p~lfVaTq~-----~ 588 (733)
T KOG0650|consen 524 IRQVTWHRKGDYLATVMPDS-GNKSVLIHQLSKRKSQ-----SPFRK----SKGLVQRVKFHPSKPYLFVATQR-----S 588 (733)
T ss_pred cceeeeecCCceEEEeccCC-CcceEEEEeccccccc-----Cchhh----cCCceeEEEecCCCceEEEEecc-----c
Confidence 45789999999999776543 3368888888762211 12211 111111 2 66665556655543 3
Q ss_pred EEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECC
Q psy4818 330 VVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLN 384 (734)
Q Consensus 330 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~ 384 (734)
|..+|+.... -.+.|.++- ..+..+.+. .|+.|++.... ..+..+|+.
T Consensus 589 vRiYdL~kqe--lvKkL~tg~--kwiS~msihp~GDnli~gs~d---~k~~WfDld 637 (733)
T KOG0650|consen 589 VRIYDLSKQE--LVKKLLTGS--KWISSMSIHPNGDNLILGSYD---KKMCWFDLD 637 (733)
T ss_pred eEEEehhHHH--HHHHHhcCC--eeeeeeeecCCCCeEEEecCC---CeeEEEEcc
Confidence 7777876532 134455544 234444443 34566655433 367788774
No 463
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=91.07 E-value=24 Score=37.58 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=51.1
Q ss_pred cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 313 NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 313 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
.++.+|+.+.. ..|+.+|.++++. .|..-. .. ...... .++++|+.. . ...|+.+|..+|+.+-..
T Consensus 240 ~~~~vy~~~~~----g~l~a~d~~tG~~-~W~~~~----~~-~~~p~~-~~~~vyv~~-~--~G~l~~~d~~tG~~~W~~ 305 (377)
T TIGR03300 240 DGGQVYAVSYQ----GRVAALDLRSGRV-LWKRDA----SS-YQGPAV-DDNRLYVTD-A--DGVVVALDRRSGSELWKN 305 (377)
T ss_pred ECCEEEEEEcC----CEEEEEECCCCcE-EEeecc----CC-ccCceE-eCCEEEEEC-C--CCeEEEEECCCCcEEEcc
Confidence 35667765542 4699999987651 232211 11 111222 347777664 2 257999999889865433
Q ss_pred C-CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 393 P-LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 393 ~-~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. .......... ..++.+++... -..++.+|.
T Consensus 306 ~~~~~~~~ssp~--i~g~~l~~~~~----~G~l~~~d~ 337 (377)
T TIGR03300 306 DELKYRQLTAPA--VVGGYLVVGDF----EGYLHWLSR 337 (377)
T ss_pred ccccCCccccCE--EECCEEEEEeC----CCEEEEEEC
Confidence 2 1211121221 13445554422 247899998
No 464
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=90.94 E-value=19 Score=37.53 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=62.9
Q ss_pred EEEEecCCcEEEEEEecCC--CCceEEEEeCCCCCCCcccCCCCceeee---c--cccceEE--EEEecCCeEEEEeCCC
Q psy4818 254 HSEVTDCGRYLLVSTSNNT--QGSDLHYFDLHSLPDGKISGKFPLKTVI---P--GMDHHHE--IIANNGPELIVKTTKN 324 (734)
Q Consensus 254 ~~~~SpDG~~l~~~~~~~~--~~~~i~~~d~~~~~~~~l~~~~~~~~l~---~--~~~~~~~--~~s~dg~~l~~~s~~~ 324 (734)
++++.+||.+++-...... ....|+.++.++.....+.....+..-. . ..+.+.+ .+++||+.||......
T Consensus 89 gi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~ 168 (326)
T PF13449_consen 89 GIAVPPDGSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESP 168 (326)
T ss_pred HeEEecCCCEEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcc
Confidence 5677777776542211100 1168999998742212221000010000 0 1122333 3899999888877542
Q ss_pred ----CC--------CceEEEEecCCCCCCCceE-eecCC------CCceeEEEEEeeCCEEEEEEEeC-----CceeEEE
Q psy4818 325 ----AP--------KGKVVTINLNNPCEKNWKT-LIPED------ENRTLDVVAAVANNKLIVHYIQN-----VRSVMDL 380 (734)
Q Consensus 325 ----~~--------~~~l~~~d~~~~~~~~~~~-l~~~~------~~~~~~~~~~~~~~~l~~~~~~~-----~~~~l~~ 380 (734)
+. ..+|+.+|..+... .+.. ..+-. ....+..+...+++++++..+.. ...+|+.
T Consensus 169 l~~d~~~~~~~~~~~~ri~~~d~~~~~~-~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~ 247 (326)
T PF13449_consen 169 LKQDGPRANPDNGSPLRILRYDPKTPGE-PVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYR 247 (326)
T ss_pred ccCCCcccccccCceEEEEEecCCCCCc-cceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEE
Confidence 11 15788888875220 0122 22221 13344445455556777766652 2246666
Q ss_pred EECC
Q psy4818 381 HDLN 384 (734)
Q Consensus 381 ~dl~ 384 (734)
+++.
T Consensus 248 v~l~ 251 (326)
T PF13449_consen 248 VDLS 251 (326)
T ss_pred EEcc
Confidence 6663
No 465
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.92 E-value=0.31 Score=46.23 Aligned_cols=86 Identities=17% Similarity=0.117 Sum_probs=55.1
Q ss_pred CeEEEEEecccCCCCCch-hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC----C--
Q psy4818 518 NGIYAIPNIRGGGELGED-WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR----P-- 590 (734)
Q Consensus 518 G~~v~~~~~rG~~~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~----p-- 590 (734)
-..|++|-||-..-+..- -............+.|+.+|.++.+++. -+-..++|.|||.|+.+...++... |
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~ 123 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-NNGRPFILAGHSQGSMHLLRLLKEEIAGDPLR 123 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-CCCCCEEEEEeChHHHHHHHHHHHHhcCchHH
Confidence 456889999974432211 0001111123356899999999877763 2334799999999999999998764 2
Q ss_pred -CceeEEEEcCCcch
Q psy4818 591 -ELYGAALILVGALD 604 (734)
Q Consensus 591 -~~~~a~v~~~~~~d 604 (734)
.+++|.+.+.++..
T Consensus 124 ~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 124 KRLVAAYLIGYPVTV 138 (207)
T ss_pred hhhheeeecCccccH
Confidence 24566666666654
No 466
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.87 E-value=0.4 Score=42.86 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc
Q psy4818 549 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~ 588 (734)
.+.+...++.+.++.- +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 3455566666655543 4789999999999999888653
No 467
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.87 E-value=0.4 Score=47.46 Aligned_cols=84 Identities=17% Similarity=0.021 Sum_probs=49.4
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHH-HHHHHHcCCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKYTKP 567 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~ 567 (734)
|.|+++|++.|.. +.|.+ +...|.. -.-|+....+|-+. ......+++|..+. ++.+.+. -..
T Consensus 1 ~pLF~fhp~~G~~--~~~~~-L~~~l~~-~~~v~~l~a~g~~~----------~~~~~~~l~~~a~~yv~~Ir~~--QP~ 64 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAP-LAAALGP-LLPVYGLQAPGYGA----------GEQPFASLDDMAAAYVAAIRRV--QPE 64 (257)
T ss_pred CCEEEEcCCCCcH--HHHHH-HHHHhcc-CceeeccccCcccc----------cccccCCHHHHHHHHHHHHHHh--CCC
Confidence 5688899875543 23332 2344543 36677778777322 11223445565543 3333221 122
Q ss_pred CcEEEEEcChHHHHHHHHHhc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQ 588 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~ 588 (734)
....+.|+|+||.++..++.+
T Consensus 65 GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 65 GPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CCEEEEeeccccHHHHHHHHH
Confidence 469999999999999999865
No 468
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.81 E-value=0.52 Score=50.33 Aligned_cols=113 Identities=15% Similarity=0.148 Sum_probs=64.0
Q ss_pred CCCCcEEEEecCCCCCcCCc-----------------cccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLP-----------------TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~-----------------~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
..+.|+|++..||||.+... .+.-+-..|+.. ..++.+|.+-|.||..+-..+... ....
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~--adLvFiDqPvGTGfS~a~~~e~~~-d~~~ 174 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF--ADLVFIDQPVGTGFSRALGDEKKK-DFEG 174 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC--CceEEEecCcccCccccccccccc-chhc
Confidence 45799999999999875432 220011245543 457778988777787541111111 1112
Q ss_pred chhHHHHHHHHHHH----cCCCCCCcEEEEEcChHHHHHHHHHh----c--CCC---ceeEEEEcCC
Q psy4818 548 CFDDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLN----Q--RPE---LYGAALILVG 601 (734)
Q Consensus 548 ~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~----~--~p~---~~~a~v~~~~ 601 (734)
.-.|+....+.+.+ ... .-.+..|+|.||||+-+..+|. + .+. +++++...++
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 23455554444333 221 2246899999999998777653 2 122 3556666666
No 469
>KOG2321|consensus
Probab=90.72 E-value=22 Score=38.66 Aligned_cols=107 Identities=16% Similarity=0.176 Sum_probs=56.6
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-CCCceeEEEEEee--CCEEEEEEEeCCceeEEEEECCCC
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLDVVAAVA--NNKLIVHYIQNVRSVMDLHDLNTG 386 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~~~dl~~g 386 (734)
|+.||=.+.+-+. .+.++.+|+.+.. ..++.. .....+..+.|.+ +...+++... ..+.+||-.+|
T Consensus 236 F~d~gL~~aVGts----~G~v~iyDLRa~~----pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk---~~~kiWd~~~G 304 (703)
T KOG2321|consen 236 FRDDGLHVAVGTS----TGSVLIYDLRASK----PLLVKDHGYELPIKKLDWQDTDQQNKVVSMDK---RILKIWDECTG 304 (703)
T ss_pred ecCCceeEEeecc----CCcEEEEEcccCC----ceeecccCCccceeeecccccCCCceEEecch---HHhhhcccccC
Confidence 6666655655443 3469999998764 222222 2122233333322 1234444332 45888998899
Q ss_pred ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 387 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 387 ~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+....+.. ...+..++.-+++..+++...+..- ..+|+=++
T Consensus 305 k~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m-~~yyiP~L 345 (703)
T KOG2321|consen 305 KPMASIEP-TSDLNDFCFVPGSGMFFTANESSKM-HTYYIPSL 345 (703)
T ss_pred Cceeeccc-cCCcCceeeecCCceEEEecCCCcc-eeEEcccc
Confidence 87555542 2335566666777766665554332 23454444
No 470
>KOG1332|consensus
Probab=90.59 E-value=17 Score=35.09 Aligned_cols=92 Identities=16% Similarity=0.078 Sum_probs=48.1
Q ss_pred CCcEEEEEEeCCCCceEEEEEEECCCCCc--cccccccc--ccCeeEEEc--CCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 152 NGKHFAYCLSKSGSDWNTLHIKDVDTGKD--YPEVLKNV--KFPSISWTH--DHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 152 DG~~la~~~~~~g~~~~~l~v~dl~~g~~--~~~~~~~~--~~~~~~wSp--Dg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
-|++||-.+++ ..|.|+.+..... +..+..+- ....++|.. -|.-|+-++.+.
T Consensus 22 ygkrlATcsSD-----~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDg---------------- 80 (299)
T KOG1332|consen 22 YGKRLATCSSD-----GTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDG---------------- 80 (299)
T ss_pred hcceeeeecCC-----ccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCc----------------
Confidence 47888876643 3577777665332 22222221 123456655 566666666543
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEE
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLV 266 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~ 266 (734)
+|-+|+-+.+.-+....+. .+.....+++|-|.+--+.+
T Consensus 81 kVIiWke~~g~w~k~~e~~--~h~~SVNsV~wapheygl~L 119 (299)
T KOG1332|consen 81 KVIIWKEENGRWTKAYEHA--AHSASVNSVAWAPHEYGLLL 119 (299)
T ss_pred eEEEEecCCCchhhhhhhh--hhcccceeecccccccceEE
Confidence 6777776665443322222 23334556778776544433
No 471
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.19 E-value=1 Score=46.09 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=65.6
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEe--ccc-CCCCCchhhhccccccCCCchhHHHHHHHHHHHc
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN--IRG-GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 562 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~--~rG-~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 562 (734)
...-++|++||-...-...-| ..++.+...|+-.+.+= -+- +.-+| |... ++.-...-.++...+++|.+.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~--R~aqI~~d~g~~~~pVvFSWPS~g~l~~---Yn~D-reS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVY--RTAQIVHDSGNDGVPVVFSWPSRGSLLG---YNYD-RESTNYSRPALERLLRYLATD 187 (377)
T ss_pred CCCeEEEEEcccCCchhHHHH--HHHHHHhhcCCCcceEEEEcCCCCeeee---cccc-hhhhhhhHHHHHHHHHHHHhC
Confidence 445699999995332221111 13455555554433322 221 11111 1110 122233456788889998876
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhc----C----CCceeEEEEcCCcchhcc
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQ----R----PELYGAALILVGALDMLR 607 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~----~----p~~~~a~v~~~~~~d~~~ 607 (734)
.- -.+|.|+.||||.++++.++.| . +..|+-+|+.+|=.|..-
T Consensus 188 ~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 188 KP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 43 3589999999999999987643 2 335788888888666543
No 472
>KOG1063|consensus
Probab=90.08 E-value=2.2 Score=46.79 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=52.8
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 177 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~ 177 (734)
++|+.++-.-+....++..|++-.+. .|..+- .+ +++...+..++|||||++|+-++.+ .+.-++....
T Consensus 535 ~~gnliASaCKS~~~ehAvI~lw~t~--~W~~~~---~L-~~HsLTVT~l~FSpdg~~LLsvsRD-----Rt~sl~~~~~ 603 (764)
T KOG1063|consen 535 PTGNLIASACKSSLKEHAVIRLWNTA--NWLQVQ---EL-EGHSLTVTRLAFSPDGRYLLSVSRD-----RTVSLYEVQE 603 (764)
T ss_pred CCCCEEeehhhhCCccceEEEEEecc--chhhhh---ee-cccceEEEEEEECCCCcEEEEeecC-----ceEEeeeeec
Confidence 44555554444444566666665432 221110 11 2345678899999999998865532 3455555432
Q ss_pred CCcc--c--ccccccc-cCeeEEEcCCcEEEEEEE
Q psy4818 178 GKDY--P--EVLKNVK-FPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 178 g~~~--~--~~~~~~~-~~~~~wSpDg~~l~y~~~ 207 (734)
+... . -.....+ +....|+||+++++-.+.
T Consensus 604 ~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSR 638 (764)
T KOG1063|consen 604 DIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASR 638 (764)
T ss_pred ccchhhhhccccccceEEEEcccCcccceeEEecC
Confidence 2110 0 0111111 256789999999554443
No 473
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=90.06 E-value=0.94 Score=47.35 Aligned_cols=97 Identities=19% Similarity=0.080 Sum_probs=56.5
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeE---EEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
.+|++||. +.... .|.. +..++...|+. +..+.+.+...-+ . .....+.+.+-++.+... ..
T Consensus 61 pivlVhG~-~~~~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~---~-------~~~~~~ql~~~V~~~l~~--~g 125 (336)
T COG1075 61 PIVLVHGL-GGGYG-NFLP-LDYRLAILGWLTNGVYAFELSGGDGTY---S-------LAVRGEQLFAYVDEVLAK--TG 125 (336)
T ss_pred eEEEEccC-cCCcc-hhhh-hhhhhcchHHHhcccccccccccCCCc---c-------ccccHHHHHHHHHHHHhh--cC
Confidence 56788996 22221 2222 22345666776 7777776531111 1 111123333434443333 22
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCC--CceeEEEEcCC
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRP--ELYGAALILVG 601 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p--~~~~a~v~~~~ 601 (734)
..++.++|||+||.++-.++...+ ..++.++...+
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 368999999999999999888877 67777777654
No 474
>KOG3914|consensus
Probab=89.88 E-value=11 Score=38.99 Aligned_cols=95 Identities=19% Similarity=0.189 Sum_probs=52.5
Q ss_pred ceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 166 DWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
+-+.+.++.+..|.... ..+.. ....++||||++.|.+.-.++ .|++-.....- ++--|-
T Consensus 130 D~~~~di~s~~~~~~~~-~lGhvSml~dVavS~D~~~IitaDRDE----------------kIRvs~ypa~f--~Iesfc 190 (390)
T KOG3914|consen 130 DVYSFDILSADSGRCEP-ILGHVSMLLDVAVSPDDQFIITADRDE----------------KIRVSRYPATF--VIESFC 190 (390)
T ss_pred CceeeeeecccccCcch-hhhhhhhhheeeecCCCCEEEEecCCc----------------eEEEEecCccc--chhhhc
Confidence 34667777766555433 22322 336889999998888765443 46555443221 111111
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 245 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 245 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
. .+..|+..++..++-- |+ ++++.+.|++||..+|
T Consensus 191 l-GH~eFVS~isl~~~~~-Ll----S~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 191 L-GHKEFVSTISLTDNYL-LL----SGSGDKTLRLWDITSG 225 (390)
T ss_pred c-ccHhheeeeeeccCce-ee----ecCCCCcEEEEecccC
Confidence 1 1233666666655433 22 2234478999999885
No 475
>KOG1963|consensus
Probab=89.72 E-value=2.9 Score=47.20 Aligned_cols=116 Identities=16% Similarity=0.150 Sum_probs=68.2
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
.+...+||+||.+|. +|.....+.+|-++|++..-...-+...-.+.||||+.....+..|.
T Consensus 253 ~V~~L~fS~~G~~Ll-----SGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DN------------- 314 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLL-----SGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDN------------- 314 (792)
T ss_pred ccceeEEecCCceEe-----ecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCc-------------
Confidence 477899999999887 45556789999999987321111222236899999999777776543
Q ss_pred CCcEEEEEECCCCCCCCeeEEe----cC----CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVE----FP----NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~----~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
+|.+....+-..+ ..|-. .+ ....+...+..+|--+.+++.... ..|-.+|+-+
T Consensus 315 ---qI~li~~~dl~~k-~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~----g~vQ~ydl~t 376 (792)
T KOG1963|consen 315 ---QIHLIKASDLEIK-STISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHP----GHVQFYDLYT 376 (792)
T ss_pred ---eEEEEeccchhhh-hhccCccCCCccccccccccceeEEEcCCCCceeecCCC----ceEEEEeccc
Confidence 5555544221111 01110 00 012355677888866666654322 3555566654
No 476
>KOG0294|consensus
Probab=89.62 E-value=24 Score=35.38 Aligned_cols=190 Identities=14% Similarity=0.142 Sum_probs=97.2
Q ss_pred EEEeeEEeCCCCc--EEEEEEeCCCCceEEEEEEECCCCCcc---cccccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 142 TALKLYAFSDNGK--HFAYCLSKSGSDWNTLHIKDVDTGKDY---PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 142 ~~~~~~~~SPDG~--~la~~~~~~g~~~~~l~v~dl~~g~~~---~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
..+....|+|+-. .|. +|.+...|.+|++..=+.+ ..... .+..++-.|.|| |+.+...+
T Consensus 84 gsitaL~F~~~~S~shLl-----S~sdDG~i~iw~~~~W~~~~slK~H~~--~Vt~lsiHPS~K-LALsVg~D------- 148 (362)
T KOG0294|consen 84 GSITALKFYPPLSKSHLL-----SGSDDGHIIIWRVGSWELLKSLKAHKG--QVTDLSIHPSGK-LALSVGGD------- 148 (362)
T ss_pred cceEEEEecCCcchhhee-----eecCCCcEEEEEcCCeEEeeeeccccc--ccceeEecCCCc-eEEEEcCC-------
Confidence 3467778887774 333 2444567888887543222 11222 246788889886 55544322
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
..+..|++-.+...- +......+ ..+.|+|.|.+.++... +.|-++.+++ . .+ +
T Consensus 149 --------~~lr~WNLV~Gr~a~--v~~L~~~a---t~v~w~~~Gd~F~v~~~-----~~i~i~q~d~-A--~v-----~ 202 (362)
T KOG0294|consen 149 --------QVLRTWNLVRGRVAF--VLNLKNKA---TLVSWSPQGDHFVVSGR-----NKIDIYQLDN-A--SV-----F 202 (362)
T ss_pred --------ceeeeehhhcCccce--eeccCCcc---eeeEEcCCCCEEEEEec-----cEEEEEeccc-H--hH-----h
Confidence 257777776554332 22222222 34899999998776543 3444444443 0 01 1
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee--CCEEEEEEEeC
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA--NNKLIVHYIQN 373 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~l~~~~~~~ 373 (734)
..+..... .... |. ++..+++-.+ +..+-.+|.+... ....+..+. ..+.++.+.. ...++++++.+
T Consensus 203 ~~i~~~~r-~l~~~~l-~~~~L~vG~d----~~~i~~~D~ds~~--~~~~~~AH~--~RVK~i~~~~~~~~~~lvTaSSD 272 (362)
T KOG0294|consen 203 REIENPKR-ILCATFL-DGSELLVGGD----NEWISLKDTDSDT--PLTEFLAHE--NRVKDIASYTNPEHEYLVTASSD 272 (362)
T ss_pred hhhhcccc-ceeeeec-CCceEEEecC----CceEEEeccCCCc--cceeeecch--hheeeeEEEecCCceEEEEeccC
Confidence 11111111 1111 22 3444443222 2347777766533 134455554 2344444333 24677777777
Q ss_pred CceeEEEEECC
Q psy4818 374 VRSVMDLHDLN 384 (734)
Q Consensus 374 ~~~~l~~~dl~ 384 (734)
| .|.+||+.
T Consensus 273 G--~I~vWd~~ 281 (362)
T KOG0294|consen 273 G--FIKVWDID 281 (362)
T ss_pred c--eEEEEEcc
Confidence 5 67777774
No 477
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=89.51 E-value=23 Score=34.97 Aligned_cols=203 Identities=10% Similarity=0.075 Sum_probs=97.9
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc----ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~----~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
++..-|||.. +..+.+ ..|..+|.++++..+ ..-...+....+|.++| .|+|+......
T Consensus 108 giv~gpdg~~--Witd~~----~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G-~lWFt~q~G~y---------- 170 (353)
T COG4257 108 GIVVGPDGSA--WITDTG----LAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWG-NLWFTGQIGAY---------- 170 (353)
T ss_pred eEEECCCCCe--eEecCc----ceeEEecCcccceEEeecccccCCCcccceeeCCCc-cEEEeeccccc----------
Confidence 5778899974 444422 267777887776432 22222233578888888 47887653210
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
-+|+- ....+.+|..+... --.+++.+|||+.- |.+.. .+-|-++|..++-.+.+.. ...+..
T Consensus 171 --------GrLdP-a~~~i~vfpaPqG~-gpyGi~atpdGsvw-yasla---gnaiaridp~~~~aev~p~---P~~~~~ 233 (353)
T COG4257 171 --------GRLDP-ARNVISVFPAPQGG-GPYGICATPDGSVW-YASLA---GNAIARIDPFAGHAEVVPQ---PNALKA 233 (353)
T ss_pred --------eecCc-ccCceeeeccCCCC-CCcceEECCCCcEE-EEecc---ccceEEcccccCCcceecC---CCcccc
Confidence 01111 11233444443222 12467889999853 33222 2556667665532111110 000111
Q ss_pred cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe-ecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
.....|+.--.++++. + ....+|+++|..... |.+. ++.. ...-..+...+.+++.+ .. -+...|.+
T Consensus 234 ---gsRriwsdpig~~wit-t--wg~g~l~rfdPs~~s---W~eypLPgs-~arpys~rVD~~grVW~-se-a~agai~r 301 (353)
T COG4257 234 ---GSRRIWSDPIGRAWIT-T--WGTGSLHRFDPSVTS---WIEYPLPGS-KARPYSMRVDRHGRVWL-SE-ADAGAIGR 301 (353)
T ss_pred ---cccccccCccCcEEEe-c--cCCceeeEeCccccc---ceeeeCCCC-CCCcceeeeccCCcEEe-ec-cccCceee
Confidence 1112343222335544 2 234679999987655 6543 2332 22222343443234333 22 22356788
Q ss_pred EECCCCceeeeeCCC
Q psy4818 381 HDLNTGKRLHSFPLD 395 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~ 395 (734)
+|.++-. .+.+..+
T Consensus 302 fdpeta~-ftv~p~p 315 (353)
T COG4257 302 FDPETAR-FTVLPIP 315 (353)
T ss_pred cCcccce-EEEecCC
Confidence 8875443 3555554
No 478
>PHA03098 kelch-like protein; Provisional
Probab=89.36 E-value=32 Score=38.71 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=52.8
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeecc--ccceEEEEEecCCeEEEEeCCCCC-----CceEEEEecCCCCCCCceEee
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPG--MDHHHEIIANNGPELIVKTTKNAP-----KGKVVTINLNNPCEKNWKTLI 347 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~--~~~~~~~~s~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l~ 347 (734)
+.++.+|..++ .|..+..- .......... ++.||+....... ...++.+|..+.. |..+-
T Consensus 406 ~~v~~yd~~t~---------~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~---W~~~~ 472 (534)
T PHA03098 406 KTVECFSLNTN---------KWSKGSPLPISHYGGCAIYH-DGKIYVIGGISYIDNIKVYNIVESYNPVTNK---WTELS 472 (534)
T ss_pred ceEEEEeCCCC---------eeeecCCCCccccCceEEEE-CCEEEEECCccCCCCCcccceEEEecCCCCc---eeeCC
Confidence 67899998873 23322110 1111222333 4568877643211 2348999987765 87654
Q ss_pred cCCCCceeEEEEEeeCCEEEEEEEeCC---ceeEEEEECCCCce
Q psy4818 348 PEDENRTLDVVAAVANNKLIVHYIQNV---RSVMDLHDLNTGKR 388 (734)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~l~~~dl~~g~~ 388 (734)
+.............+ +.+|+....+. ...++.+|+.+.++
T Consensus 473 ~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 473 SLNFPRINASLCIFN-NKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred CCCcccccceEEEEC-CEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 322111111222234 77877665432 24788999876665
No 479
>KOG0270|consensus
Probab=89.28 E-value=31 Score=36.20 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=103.4
Q ss_pred eeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC
Q psy4818 192 SISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN 271 (734)
Q Consensus 192 ~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 271 (734)
.++|.-+-+.|+.+..- ...|.+|++.+++....+-. +.+-+..+.|.|.--.++++.+
T Consensus 248 ~Ls~n~~~~nVLaSgsa---------------D~TV~lWD~~~g~p~~s~~~----~~k~Vq~l~wh~~~p~~LLsGs-- 306 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSA---------------DKTVKLWDVDTGKPKSSITH----HGKKVQTLEWHPYEPSVLLSGS-- 306 (463)
T ss_pred HHHhccccceeEEecCC---------------CceEEEEEcCCCCcceehhh----cCCceeEEEecCCCceEEEecc--
Confidence 46777777777776532 23799999999876544322 2224567899998776666543
Q ss_pred CCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE--EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC
Q psy4818 272 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 349 (734)
Q Consensus 272 ~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 349 (734)
....+.+.|... +. + ....|. +.+... .|.|.....+|.+.. ++.|+-+|+.......| .+-.+
T Consensus 307 -~D~~V~l~D~R~-~~-~--s~~~wk-----~~g~VEkv~w~~~se~~f~~~td---dG~v~~~D~R~~~~~vw-t~~AH 372 (463)
T KOG0270|consen 307 -YDGTVALKDCRD-PS-N--SGKEWK-----FDGEVEKVAWDPHSENSFFVSTD---DGTVYYFDIRNPGKPVW-TLKAH 372 (463)
T ss_pred -ccceEEeeeccC-cc-c--cCceEE-----eccceEEEEecCCCceeEEEecC---CceEEeeecCCCCCcee-EEEec
Confidence 335777888764 11 0 012232 112222 388877766666654 35699999876542223 33344
Q ss_pred CCCceeEEEEEeeC-CEEEEEEEeCCceeEEEEECCCCceeeeeC---CCCceEEeeccCcccceEEEEEecCCCCceEE
Q psy4818 350 DENRTLDVVAAVAN-NKLIVHYIQNVRSVMDLHDLNTGKRLHSFP---LDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 425 (734)
Q Consensus 350 ~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~---~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~ 425 (734)
. ..+.++.+... ..++.+...+ ..+.+|++. +...+... +..|...++...++-. ..+++.+.. +.+.
T Consensus 373 d--~~ISgl~~n~~~p~~l~t~s~d--~~Vklw~~~-~~~~~~v~~~~~~~~rl~c~~~~~~~a-~~la~GG~k--~~~~ 444 (463)
T KOG0270|consen 373 D--DEISGLSVNIQTPGLLSTASTD--KVVKLWKFD-VDSPKSVKEHSFKLGRLHCFALDPDVA-FTLAFGGEK--AVLR 444 (463)
T ss_pred c--CCcceEEecCCCCcceeecccc--ceEEEEeec-CCCCcccccccccccceeecccCCCcc-eEEEecCcc--ceEE
Confidence 3 24455544321 2344444333 467777773 32212221 1133444555555543 223333322 2566
Q ss_pred EEeC
Q psy4818 426 HCNI 429 (734)
Q Consensus 426 ~~d~ 429 (734)
++|+
T Consensus 445 vwd~ 448 (463)
T KOG0270|consen 445 VWDI 448 (463)
T ss_pred Eeec
Confidence 6666
No 480
>KOG2041|consensus
Probab=89.19 E-value=42 Score=37.56 Aligned_cols=236 Identities=14% Similarity=0.132 Sum_probs=118.4
Q ss_pred CCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc---cccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 139 DGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN---VKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~---~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
++..++..+.|.-..++|. ++|.+| -|.||=+-.|....+.+.+ .-+.+.+|..||..|..+-.|..-
T Consensus 69 GH~~sV~vvTWNe~~QKLT-tSDt~G----lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGav---- 139 (1189)
T KOG2041|consen 69 GHNASVMVVTWNENNQKLT-TSDTSG----LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAV---- 139 (1189)
T ss_pred cCcceEEEEEecccccccc-ccCCCc----eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCE----
Confidence 4566788899998888876 344443 5777777777643332221 123688999999999887654310
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
..-+....+||-.++.. .....+.||+|.+.++|.... .++.++|..+.-..++.
T Consensus 140 --IVGsvdGNRIwgKeLkg---------------~~l~hv~ws~D~~~~Lf~~an----ge~hlydnqgnF~~Kl~---- 194 (1189)
T KOG2041|consen 140 --IVGSVDGNRIWGKELKG---------------QLLAHVLWSEDLEQALFKKAN----GETHLYDNQGNFERKLE---- 194 (1189)
T ss_pred --EEEeeccceecchhcch---------------heccceeecccHHHHHhhhcC----CcEEEecccccHHHhhh----
Confidence 00011122344222211 123468899999998874322 56677776552111111
Q ss_pred ceeeecc------cc----------ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEE
Q psy4818 296 LKTVIPG------MD----------HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 359 (734)
Q Consensus 296 ~~~l~~~------~~----------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 359 (734)
....+.. +. +.+.++-||--.+++.-.+ | +-+|++-.- ..+ .++-.. +..+-+..
T Consensus 195 ~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~n-G-r~QiMR~eN-D~~-----Pvv~dt-gm~~vgak 265 (1189)
T KOG2041|consen 195 KDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYAN-G-RMQIMRSEN-DPE-----PVVVDT-GMKIVGAK 265 (1189)
T ss_pred hceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcC-c-eehhhhhcC-CCC-----CeEEec-ccEeecce
Confidence 1111110 00 0001122333333332221 1 222333211 111 112222 12233445
Q ss_pred EeeCCEEEEEEEeC-------CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 360 AVANNKLIVHYIQN-------VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 360 ~~~~~~l~~~~~~~-------~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
|..++.++.....+ ....+..++. -|+....+..|...|+++++...+-++++...|+
T Consensus 266 Wnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~Avdsf 330 (1189)
T KOG2041|consen 266 WNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIAVDSF 330 (1189)
T ss_pred ecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEEecce
Confidence 55445544433211 1236777776 5887788877756678888876666666666654
No 481
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.97 E-value=11 Score=37.48 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=41.4
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC----------ccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----------DYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~----------~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
.+.+.-+|++++-.. ..++|+++-++.+. .+..+.. +..+.+++|+|..++|++....
T Consensus 133 ~Ieyig~n~fvi~dE-----R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr------ 201 (316)
T COG3204 133 TIEYIGGNQFVIVDE-----RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKER------ 201 (316)
T ss_pred HeEEecCCEEEEEeh-----hcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEcc------
Confidence 456666776554221 22456666554432 1111222 5557899999999999998753
Q ss_pred CCCcccccCCcEEEEEECC
Q psy4818 215 DGTETTAHMGQKIYYHVLG 233 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~ 233 (734)
.|..||.++.+
T Consensus 202 --------~P~~I~~~~~~ 212 (316)
T COG3204 202 --------NPIGIFEVTQS 212 (316)
T ss_pred --------CCcEEEEEecC
Confidence 35678877743
No 482
>KOG0267|consensus
Probab=88.79 E-value=0.85 Score=50.13 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=56.8
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+...+....|||||++++ .|.+...+.+||+.-|+...+-. ..+....+.+.|-. |.-...
T Consensus 153 ~~~vv~~l~lsP~Gr~v~-----~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e----~Lla~G--------- 214 (825)
T KOG0267|consen 153 HTRVVDVLRLSPDGRWVA-----SGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLE----VLLAPG--------- 214 (825)
T ss_pred CcceeEEEeecCCCceee-----ccCCcceeeeecccccccccccccccccccccccCchh----hhhccC---------
Confidence 345577899999999988 45567899999999888765433 11222333333322 111110
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEE
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLL 265 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~ 265 (734)
.....+.++++.+-+ +|-....+..-+.+..|+|||+.++
T Consensus 215 ---s~d~tv~f~dletfe----~I~s~~~~~~~v~~~~fn~~~~~~~ 254 (825)
T KOG0267|consen 215 ---SSDRTVRFWDLETFE----VISSGKPETDGVRSLAFNPDGKIVL 254 (825)
T ss_pred ---CCCceeeeeccceeE----EeeccCCccCCceeeeecCCceeee
Confidence 112256666665421 2222221222345678999999766
No 483
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=88.67 E-value=38 Score=36.36 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=52.9
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCce
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT 354 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 354 (734)
..++.+|+.+|. ..|..-... ......+++.+|+.+. +.+|+.+|.++++. .|+.-. .....
T Consensus 266 g~l~ald~~tG~-------~~W~~~~~~----~~~~~~~~~~vy~~~~----~g~l~ald~~tG~~-~W~~~~--~~~~~ 327 (394)
T PRK11138 266 GNLVALDLRSGQ-------IVWKREYGS----VNDFAVDGGRIYLVDQ----NDRVYALDTRGGVE-LWSQSD--LLHRL 327 (394)
T ss_pred CeEEEEECCCCC-------EEEeecCCC----ccCcEEECCEEEEEcC----CCeEEEEECCCCcE-EEcccc--cCCCc
Confidence 478888988742 123221111 1112345778887654 34699999987641 232111 01112
Q ss_pred eEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCC
Q psy4818 355 LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 394 (734)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~ 394 (734)
....... ++.+|+.. .+ ..|+.+|..+|+.+.+...
T Consensus 328 ~~sp~v~-~g~l~v~~-~~--G~l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 328 LTAPVLY-NGYLVVGD-SE--GYLHWINREDGRFVAQQKV 363 (394)
T ss_pred ccCCEEE-CCEEEEEe-CC--CEEEEEECCCCCEEEEEEc
Confidence 2222233 36776653 33 3799999999987655543
No 484
>KOG1034|consensus
Probab=88.32 E-value=31 Score=34.89 Aligned_cols=147 Identities=13% Similarity=0.059 Sum_probs=78.9
Q ss_pred EEEEEeCCCCceEEEEEEECCCCCc-cc---ccccccccCeeEEEcCCcE-EEEEEEecCCCCCCCCcccccCCcEEEEE
Q psy4818 156 FAYCLSKSGSDWNTLHIKDVDTGKD-YP---EVLKNVKFPSISWTHDHKG-FFYNQYCDINGTADGTETTAHMGQKIYYH 230 (734)
Q Consensus 156 la~~~~~~g~~~~~l~v~dl~~g~~-~~---~~~~~~~~~~~~wSpDg~~-l~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (734)
-+|+. .|+.+.+||-.+.+++.. ++ +......+...+|+=|... =-|... .++..-|++.
T Consensus 56 ~vfat--vG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~-------------~G~~GvIrVi 120 (385)
T KOG1034|consen 56 QVFAT--VGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAA-------------GGYLGVIRVI 120 (385)
T ss_pred ceEEE--eCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEe-------------ecceeEEEEE
Confidence 44444 244556666666655432 11 1222233467788777652 111111 1223367777
Q ss_pred ECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc----cce
Q psy4818 231 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM----DHH 306 (734)
Q Consensus 231 ~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~----~~~ 306 (734)
++-+.+-...++- +...+..+.+.|+.-.|++..+.+ ..|.+|++.+. .-..++.+. +..
T Consensus 121 d~~~~~~~~~~~g----hG~sINeik~~p~~~qlvls~SkD---~svRlwnI~~~---------~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 121 DVVSGQCSKNYRG----HGGSINEIKFHPDRPQLVLSASKD---HSVRLWNIQTD---------VCVAVFGGVEGHRDEV 184 (385)
T ss_pred ecchhhhccceec----cCccchhhhcCCCCCcEEEEecCC---ceEEEEeccCC---------eEEEEecccccccCcE
Confidence 7766543322221 111334577889998888877543 57889999882 122333332 223
Q ss_pred EEE-EEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 307 HEI-IANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 307 ~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
.++ |+.||++|+ + .|-+..|..|++..
T Consensus 185 LSvD~~~~gd~i~--S--cGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 185 LSVDFSLDGDRIA--S--CGMDHSLKLWRLNV 212 (385)
T ss_pred EEEEEcCCCCeee--c--cCCcceEEEEecCh
Confidence 334 888988655 2 34456688877763
No 485
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.96 E-value=0.66 Score=42.28 Aligned_cols=25 Identities=28% Similarity=0.235 Sum_probs=21.1
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRP 590 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p 590 (734)
...+|.++|||+||.++..++.+..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 4568999999999999999877643
No 486
>KOG1332|consensus
Probab=87.84 E-value=6.1 Score=37.98 Aligned_cols=116 Identities=16% Similarity=0.098 Sum_probs=64.4
Q ss_pred CcEEEeeEEeCCC---C-----------cEEEEEEeCCCCceEEEEEEECCCCCc-----ccccccccccCeeEEEcCCc
Q psy4818 140 GTTALKLYAFSDN---G-----------KHFAYCLSKSGSDWNTLHIKDVDTGKD-----YPEVLKNVKFPSISWTHDHK 200 (734)
Q Consensus 140 ~~~~~~~~~~SPD---G-----------~~la~~~~~~g~~~~~l~v~dl~~g~~-----~~~~~~~~~~~~~~wSpDg~ 200 (734)
+..++.+++|.|- | ++++ +|.-.+.+.||+.+.+.- +....+.+ ..++|.|.-.
T Consensus 148 H~~GvnsVswapa~~~g~~~~~~~~~~~krlv-----SgGcDn~VkiW~~~~~~w~~e~~l~~H~dwV--RDVAwaP~~g 220 (299)
T KOG1332|consen 148 HEIGVNSVSWAPASAPGSLVDQGPAAKVKRLV-----SGGCDNLVKIWKFDSDSWKLERTLEGHKDWV--RDVAWAPSVG 220 (299)
T ss_pred cccccceeeecCcCCCccccccCcccccceee-----ccCCccceeeeecCCcchhhhhhhhhcchhh--hhhhhccccC
Confidence 5667888999997 6 3443 344457889999888753 22223333 5788888641
Q ss_pred ----EEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCce
Q psy4818 201 ----GFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 276 (734)
Q Consensus 201 ----~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 276 (734)
+|+-.+.+ +.--||..+.+..+-+..++.+. +.....++||..|..|++... .+.
T Consensus 221 l~~s~iAS~SqD--------------g~viIwt~~~e~e~wk~tll~~f---~~~~w~vSWS~sGn~LaVs~G----dNk 279 (299)
T KOG1332|consen 221 LPKSTIASCSQD--------------GTVIIWTKDEEYEPWKKTLLEEF---PDVVWRVSWSLSGNILAVSGG----DNK 279 (299)
T ss_pred CCceeeEEecCC--------------CcEEEEEecCccCcccccccccC---CcceEEEEEeccccEEEEecC----CcE
Confidence 23322221 12234444433232233333222 224567899999999997532 256
Q ss_pred EEEEeCC
Q psy4818 277 LHYFDLH 283 (734)
Q Consensus 277 i~~~d~~ 283 (734)
+.+|.-.
T Consensus 280 vtlwke~ 286 (299)
T KOG1332|consen 280 VTLWKEN 286 (299)
T ss_pred EEEEEeC
Confidence 6666443
No 487
>KOG3914|consensus
Probab=87.55 E-value=11 Score=38.84 Aligned_cols=74 Identities=12% Similarity=0.240 Sum_probs=42.9
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCcee
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 389 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~ 389 (734)
|++|++ +++.++++. +|.+......- .+.... -+..+.+..+...+ ++.+++. .|...|++||+.+|+.+
T Consensus 159 vS~D~~-~IitaDRDE---kIRvs~ypa~f--~Iesfc-lGH~eFVS~isl~~-~~~LlS~--sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 159 VSPDDQ-FIITADRDE---KIRVSRYPATF--VIESFC-LGHKEFVSTISLTD-NYLLLSG--SGDKTLRLWDITSGKLL 228 (390)
T ss_pred ecCCCC-EEEEecCCc---eEEEEecCccc--chhhhc-cccHhheeeeeecc-Cceeeec--CCCCcEEEEecccCCcc
Confidence 999985 555676643 34443332211 112222 22234556666676 6666555 44578999999999987
Q ss_pred eeeC
Q psy4818 390 HSFP 393 (734)
Q Consensus 390 ~~l~ 393 (734)
..+.
T Consensus 229 ~t~d 232 (390)
T KOG3914|consen 229 DTCD 232 (390)
T ss_pred cccc
Confidence 5544
No 488
>PHA03098 kelch-like protein; Provisional
Probab=87.19 E-value=15 Score=41.43 Aligned_cols=145 Identities=11% Similarity=-0.024 Sum_probs=72.0
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeec--cccceEEEEEecCCeEEEEeCCCC---CCceEEEEecCCCCCCCceEeecC
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIP--GMDHHHEIIANNGPELIVKTTKNA---PKGKVVTINLNNPCEKNWKTLIPE 349 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~ 349 (734)
+.++.+|..++ .|..+.. .......... -++.||+.+.... ....++.+|+.+.. |..+.+.
T Consensus 358 ~~v~~yd~~~~---------~W~~~~~lp~~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~---W~~~~~~ 424 (534)
T PHA03098 358 NTVESWKPGES---------KWREEPPLIFPRYNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNK---WSKGSPL 424 (534)
T ss_pred ceEEEEcCCCC---------ceeeCCCcCcCCccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCe---eeecCCC
Confidence 67889998772 2332211 1111122233 3467887765321 12468899987765 7765432
Q ss_pred CCCceeEEEEEeeCCEEEEEEEeCC------ceeEEEEECCCCceeeeeC-C--CCceEEeeccCcccceEEEEEecCCC
Q psy4818 350 DENRTLDVVAAVANNKLIVHYIQNV------RSVMDLHDLNTGKRLHSFP-L--DLGQITHISGRRKYNEVFYGFTSFLQ 420 (734)
Q Consensus 350 ~~~~~~~~~~~~~~~~l~~~~~~~~------~~~l~~~dl~~g~~~~~l~-~--~~g~v~~~~~~~d~~~l~~~~ss~~~ 420 (734)
........+... ++.+|+....+. ...++++|+.++++. .+. . +........ . ++++++. .+...
T Consensus 425 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~r~~~~~~~--~-~~~iyv~-GG~~~ 498 (534)
T PHA03098 425 PISHYGGCAIYH-DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWT-ELSSLNFPRINASLCI--F-NNKIYVV-GGDKY 498 (534)
T ss_pred CccccCceEEEE-CCEEEEECCccCCCCCcccceEEEecCCCCcee-eCCCCCcccccceEEE--E-CCEEEEE-cCCcC
Confidence 211111122223 478887764322 235899999877763 332 1 211111111 1 3445443 23221
Q ss_pred ---CceEEEEeCCCCcCCCCCCceeEEe
Q psy4818 421 ---PGTIYHCNIPENITDQDDFKPTIFR 445 (734)
Q Consensus 421 ---P~~~~~~d~~~~~~~~~~~~~~~~~ 445 (734)
-..++.||+ .++ .++.+.
T Consensus 499 ~~~~~~v~~yd~-----~~~--~W~~~~ 519 (534)
T PHA03098 499 EYYINEIEVYDD-----KTN--TWTLFC 519 (534)
T ss_pred CcccceeEEEeC-----CCC--EEEecC
Confidence 246889998 455 565443
No 489
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=87.08 E-value=30 Score=37.63 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=62.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
...++.||+|+.++.. |+..+.||- .. + ......+.. ..++|++.++ ++....
T Consensus 35 p~~ls~npngr~v~V~----g~geY~iyt--~~-~-~r~k~~G~g--~~~vw~~~n~-yAv~~~---------------- 87 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVC----GDGEYEIYT--AL-A-WRNKAFGSG--LSFVWSSRNR-YAVLES---------------- 87 (443)
T ss_dssp -SEEEE-TTSSEEEEE----ETTEEEEEE--TT-T-TEEEEEEE---SEEEE-TSSE-EEEE-T----------------
T ss_pred CeeEEECCCCCEEEEE----cCCEEEEEE--cc-C-CcccccCce--eEEEEecCcc-EEEEEC----------------
Confidence 5678999999999982 223366665 11 1 111122222 5799999776 332221
Q ss_pred CcEEEE-EECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 224 GQKIYY-HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 224 ~~~l~~-~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
..+|.+ .++...... .+..+... ..+ |. |..|.+... ..|.++|.+++ .....+.-
T Consensus 88 ~~~I~I~kn~~~~~~k---~i~~~~~~---~~I-f~--G~LL~~~~~-----~~i~~yDw~~~---------~~i~~i~v 144 (443)
T PF04053_consen 88 SSTIKIYKNFKNEVVK---SIKLPFSV---EKI-FG--GNLLGVKSS-----DFICFYDWETG---------KLIRRIDV 144 (443)
T ss_dssp TS-EEEEETTEE-TT--------SS-E---EEE-E---SSSEEEEET-----TEEEEE-TTT-----------EEEEESS
T ss_pred CCeEEEEEcCccccce---EEcCCccc---ceE-Ec--CcEEEEECC-----CCEEEEEhhHc---------ceeeEEec
Confidence 124554 344322211 11111111 111 11 887765432 35899999882 12222221
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 303 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 303 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
..-..-+|+++|+.+++++.. ..-|+.++.+
T Consensus 145 ~~vk~V~Ws~~g~~val~t~~---~i~il~~~~~ 175 (443)
T PF04053_consen 145 SAVKYVIWSDDGELVALVTKD---SIYILKYNLE 175 (443)
T ss_dssp -E-EEEEE-TTSSEEEEE-S----SEEEEEE-HH
T ss_pred CCCcEEEEECCCCEEEEEeCC---eEEEEEecch
Confidence 111223599999999988754 2335555554
No 490
>PF03283 PAE: Pectinacetylesterase
Probab=86.40 E-value=0.49 Score=49.67 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHH
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 586 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~ 586 (734)
.-+.+++++|..++.-++++|.|.|.|+||+-++.-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4678899999999999999999999999999988754
No 491
>KOG0321|consensus
Probab=86.02 E-value=24 Score=38.84 Aligned_cols=114 Identities=11% Similarity=0.057 Sum_probs=67.3
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc------cccc---cccc-ccCeeEEEcCC--cEEEEEEEecCCCCC
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD------YPEV---LKNV-KFPSISWTHDH--KGFFYNQYCDINGTA 214 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~------~~~~---~~~~-~~~~~~wSpDg--~~l~y~~~~~~~~~~ 214 (734)
..+.-|...||-+.. .+..|.|||+..... .... .... ..+...+.-|. .+|+....|.
T Consensus 223 vv~fkDe~tlaSaga----~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~----- 293 (720)
T KOG0321|consen 223 VVLFKDESTLASAGA----ADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDN----- 293 (720)
T ss_pred EEEEeccceeeeccC----CCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCC-----
Confidence 566778877774432 346899999976431 1100 0000 11233445554 6666655433
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.||.+++.+-....+..|...-...++.--..||||.+|+ ++......|+|-+.+
T Consensus 294 -----------sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~----SgSsd~~ayiw~vs~ 348 (720)
T KOG0321|consen 294 -----------SIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLL----SGSSDEQAYIWVVSS 348 (720)
T ss_pred -----------cEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEe----ccCCCcceeeeeecC
Confidence 6999988765443334444433455666778899999998 333446778887776
No 492
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=85.99 E-value=24 Score=37.43 Aligned_cols=17 Identities=12% Similarity=-0.138 Sum_probs=11.8
Q ss_pred EEEEEEecCCcEEEEEEe
Q psy4818 252 GLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~ 269 (734)
..++.|.|||+ |++...
T Consensus 126 ~~~l~~gpDG~-LYv~~G 142 (367)
T TIGR02604 126 LNSLAWGPDGW-LYFNHG 142 (367)
T ss_pred ccCceECCCCC-EEEecc
Confidence 44789999996 555443
No 493
>KOG1230|consensus
Probab=85.77 E-value=18 Score=37.69 Aligned_cols=189 Identities=14% Similarity=0.132 Sum_probs=101.4
Q ss_pred eEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC---CCC---ceEEEEEEECCCCCccccccccc
Q psy4818 115 SILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK---SGS---DWNTLHIKDVDTGKDYPEVLKNV 188 (734)
Q Consensus 115 ~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~---~g~---~~~~l~v~dl~~g~~~~~~~~~~ 188 (734)
..||+.+....+|..+..||.-.+- . -..+..-|.|....|.-.. ++. ...++|++|+.+.+..+....+.
T Consensus 98 ndLy~Yn~k~~eWkk~~spn~P~pR--s-shq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trkweql~~~g~ 174 (521)
T KOG1230|consen 98 NDLYSYNTKKNEWKKVVSPNAPPPR--S-SHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRKWEQLEFGGG 174 (521)
T ss_pred eeeeEEeccccceeEeccCCCcCCC--c-cceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccchheeeccCCC
Confidence 4577777777889988888854332 1 1123444666444432111 110 12479999999887544333222
Q ss_pred -----ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcE
Q psy4818 189 -----KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRY 263 (734)
Q Consensus 189 -----~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~ 263 (734)
.+..++|- .+-|+|..+.+.. .+..+-+.||..+|++-+...+..-.....+..-..+..+|+|..
T Consensus 175 PS~RSGHRMvawK--~~lilFGGFhd~n-------r~y~YyNDvy~FdLdtykW~Klepsga~PtpRSGcq~~vtpqg~i 245 (521)
T KOG1230|consen 175 PSPRSGHRMVAWK--RQLILFGGFHDSN-------RDYIYYNDVYAFDLDTYKWSKLEPSGAGPTPRSGCQFSVTPQGGI 245 (521)
T ss_pred CCCCccceeEEee--eeEEEEcceecCC-------CceEEeeeeEEEeccceeeeeccCCCCCCCCCCcceEEecCCCcE
Confidence 12356773 4567787775421 112344578888888754433222110011223345678899998
Q ss_pred EEEEEecC----------CCCceEEEEeCCCCCCCcccCCCCceeeec-----cccceEEE-EEecCCeEEE
Q psy4818 264 LLVSTSNN----------TQGSDLHYFDLHSLPDGKISGKFPLKTVIP-----GMDHHHEI-IANNGPELIV 319 (734)
Q Consensus 264 l~~~~~~~----------~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-----~~~~~~~~-~s~dg~~l~~ 319 (734)
+++-..+. ...+++|+++.++|... ...|.++-. ....++.+ +.++++.++|
T Consensus 246 ~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~d----Kw~W~kvkp~g~kPspRsgfsv~va~n~kal~F 313 (521)
T KOG1230|consen 246 VVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGRED----KWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFF 313 (521)
T ss_pred EEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCc----ceeEeeccCCCCCCCCCCceeEEEecCCceEEe
Confidence 88754321 11278999988874322 233443321 12234443 5566676666
No 494
>KOG0300|consensus
Probab=85.54 E-value=42 Score=33.60 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=54.4
Q ss_pred eEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 167 WNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
..+--+||+++|+.+....+.. ......=.| .++|+.++..+ ....+|+... ..+.+.+|++
T Consensus 293 DRTAnlwDVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrD---------------tTFRLWDFRe-aI~sV~VFQG 355 (481)
T KOG0300|consen 293 DRTANLWDVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRD---------------TTFRLWDFRE-AIQSVAVFQG 355 (481)
T ss_pred cccceeeeeccCceeccccCcchhccccccCC-cceEEEEeccC---------------ceeEeccchh-hcceeeeecc
Confidence 3467789999999765332221 112222234 35666666432 2455566653 2345667775
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
. ...+.+..|.-|.+.+ ++.+...|.+||+..
T Consensus 356 H--tdtVTS~vF~~dd~vV-----SgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 356 H--TDTVTSVVFNTDDRVV-----SGSDDRTVKVWDLRN 387 (481)
T ss_pred c--ccceeEEEEecCCcee-----ecCCCceEEEeeecc
Confidence 3 2345677888887743 234446889999987
No 495
>KOG3724|consensus
Probab=85.49 E-value=0.91 Score=50.81 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHc--C--CCC---CCcEEEEEcChHHHHHHHHHhcCCCceeEE
Q psy4818 550 DDFQAAAEYMINK--K--YTK---PKYITIMGGSNGGLLVGACLNQRPELYGAA 596 (734)
Q Consensus 550 ~D~~~~~~~l~~~--~--~~d---~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~ 596 (734)
+=+..|++++.+. + .-+ |.-|+++||||||+.+-++++. |...+..
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~s 209 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccch
Confidence 4456677777653 2 123 7789999999999999988875 5443433
No 496
>KOG0308|consensus
Probab=85.22 E-value=8 Score=42.39 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=72.4
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..++.+++-.+.|..|+ +|+-...|++||..+++.+....+.. ++..+.-++||++++-.+.|.
T Consensus 171 k~siYSLA~N~t~t~iv-----sGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDg---------- 235 (735)
T KOG0308|consen 171 KDSIYSLAMNQTGTIIV-----SGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDG---------- 235 (735)
T ss_pred ccceeeeecCCcceEEE-----ecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCc----------
Confidence 34566777777774444 34445789999999987543222222 235778899999999887654
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.|.+|+++... .+..+....+. +....-+|+=++++. ++...-|++-|+.+
T Consensus 236 ------tIrlWdLgqQr--Cl~T~~vH~e~--VWaL~~~~sf~~vYs----G~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 236 ------TIRLWDLGQQR--CLATYIVHKEG--VWALQSSPSFTHVYS----GGRDGNIYRTDLRN 286 (735)
T ss_pred ------eEEeeeccccc--eeeeEEeccCc--eEEEeeCCCcceEEe----cCCCCcEEecccCC
Confidence 68999998643 22223332222 344555666666652 22335788888877
No 497
>PLN02454 triacylglycerol lipase
Probab=85.14 E-value=1.4 Score=46.52 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=29.8
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~ 587 (734)
..+++.+.++.|+++.--..-+|.++|||+||.||..++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 3457788888887753222236999999999999998874
No 498
>KOG4532|consensus
Probab=85.04 E-value=29 Score=34.02 Aligned_cols=118 Identities=11% Similarity=-0.081 Sum_probs=63.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC--CCCccccccccc-c-cCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYPEVLKNV-K-FPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~--~g~~~~~~~~~~-~-~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
+....+|||+++++.+-+ + .+++.+.++ +-..+....... + ....+||-....++....+.
T Consensus 161 ~ns~~~snd~~~~~~Vgd---s--~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg---------- 225 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGD---S--RRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDG---------- 225 (344)
T ss_pred eeeeEEcCCCceEEEecC---C--CcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCC----------
Confidence 567899999999886543 2 345444443 322222111111 1 13467888777777766543
Q ss_pred cccCCcEEEEEECCCCCCCCe-eEEecCCCCeeEEEEEEecCCcE-EEEEEecCCCCceEEEEeCCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDI-PVVEFPNGRSLGLHSEVTDCGRY-LLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~-~v~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
.+.++++......-. ..-+.+++.+.+....||+-|-. |+|. ++ ..+.+.++|+.++
T Consensus 226 ------~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~-sE--hfs~~hv~D~R~~ 284 (344)
T KOG4532|consen 226 ------TCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFI-SE--HFSRVHVVDTRNY 284 (344)
T ss_pred ------cEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEE-ec--CcceEEEEEcccC
Confidence 344555432211110 11122444556778899986642 2332 22 3478999999884
No 499
>KOG0270|consensus
Probab=84.90 E-value=56 Score=34.46 Aligned_cols=100 Identities=16% Similarity=0.213 Sum_probs=59.8
Q ss_pred CCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCee
Q psy4818 163 SGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP 241 (734)
Q Consensus 163 ~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~ 241 (734)
+|+...++.+||+++|++..... .+..+..+.|.|-.-.+.....- ..+|.+.++........
T Consensus 261 SgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~---------------D~~V~l~D~R~~~~s~~- 324 (463)
T KOG0270|consen 261 SGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSY---------------DGTVALKDCRDPSNSGK- 324 (463)
T ss_pred ecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccc---------------cceEEeeeccCccccCc-
Confidence 35566899999999999754332 33345789999987666665432 22566666553111100
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 242 VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 242 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
-+.. .+-+..+.|.|-....++.+. +...||.+|+..
T Consensus 325 ~wk~---~g~VEkv~w~~~se~~f~~~t---ddG~v~~~D~R~ 361 (463)
T KOG0270|consen 325 EWKF---DGEVEKVAWDPHSENSFFVST---DDGTVYYFDIRN 361 (463)
T ss_pred eEEe---ccceEEEEecCCCceeEEEec---CCceEEeeecCC
Confidence 0100 012345778887777776553 235789999877
No 500
>KOG1036|consensus
Probab=84.62 E-value=46 Score=33.33 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=78.1
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCce
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGK 329 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~ 329 (734)
.+.++.|+|.+..|++.+++ ..+.+++.... .+........+... .|.+ ..+++. ++ -.+.
T Consensus 15 ~IS~v~f~~~~~~LLvssWD----gslrlYdv~~~---------~l~~~~~~~~plL~c~F~d-~~~~~~-G~---~dg~ 76 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSWD----GSLRLYDVPAN---------SLKLKFKHGAPLLDCAFAD-ESTIVT-GG---LDGQ 76 (323)
T ss_pred ceeeEEEcCcCCcEEEEecc----CcEEEEeccch---------hhhhheecCCceeeeeccC-CceEEE-ec---cCce
Confidence 45678999999999887754 45777777662 11111111111111 1433 344443 22 3457
Q ss_pred EEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCccc
Q psy4818 330 VVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKY 408 (734)
Q Consensus 330 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~ 408 (734)
|-++|+.++.. ..+-.+. ..+..+........+++..-+ ..+.+||... +. ...+.. ...|..++. .+
T Consensus 77 vr~~Dln~~~~---~~igth~--~~i~ci~~~~~~~~vIsgsWD--~~ik~wD~R~-~~-~~~~~d~~kkVy~~~v--~g 145 (323)
T KOG1036|consen 77 VRRYDLNTGNE---DQIGTHD--EGIRCIEYSYEVGCVISGSWD--KTIKFWDPRN-KV-VVGTFDQGKKVYCMDV--SG 145 (323)
T ss_pred EEEEEecCCcc---eeeccCC--CceEEEEeeccCCeEEEcccC--ccEEEEeccc-cc-cccccccCceEEEEec--cC
Confidence 99999988761 2233333 333333332224456665555 4788998743 21 122222 234545544 35
Q ss_pred ceEEEEEecCCCCceEEEEeC
Q psy4818 409 NEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 409 ~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.|++..+. ..+..||+
T Consensus 146 ~~LvVg~~~----r~v~iyDL 162 (323)
T KOG1036|consen 146 NRLVVGTSD----RKVLIYDL 162 (323)
T ss_pred CEEEEeecC----ceEEEEEc
Confidence 677776554 36888998
Done!