Query psy4818
Match_columns 734
No_of_seqs 437 out of 3817
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 18:31:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4818.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4818hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iuj_A Prolyl endopeptidase; h 100.0 2.2E-99 7E-104 876.2 80.2 682 20-734 9-693 (693)
2 2xdw_A Prolyl endopeptidase; a 100.0 6.3E-96 2E-100 852.2 83.8 699 21-730 4-709 (710)
3 2bkl_A Prolyl endopeptidase; m 100.0 4.2E-94 1.4E-98 834.3 78.3 678 22-731 2-681 (695)
4 1yr2_A Prolyl oligopeptidase; 100.0 6.7E-92 2.3E-96 821.4 78.6 679 20-731 37-723 (741)
5 2xe4_A Oligopeptidase B; hydro 100.0 1.6E-91 5.5E-96 814.5 77.1 665 21-730 31-746 (751)
6 4hvt_A Ritya.17583.B, post-pro 100.0 4.7E-87 1.6E-91 757.1 67.4 658 35-729 14-710 (711)
7 3azo_A Aminopeptidase; POP fam 100.0 5.7E-54 1.9E-58 496.2 57.0 588 92-730 25-653 (662)
8 4a5s_A Dipeptidyl peptidase 4 100.0 1.9E-54 6.6E-59 505.3 52.5 589 95-731 68-731 (740)
9 1z68_A Fibroblast activation p 100.0 4.4E-50 1.5E-54 468.1 50.8 585 93-726 64-719 (719)
10 3o4h_A Acylamino-acid-releasin 100.0 3.1E-50 1.1E-54 457.4 47.3 553 78-727 10-581 (582)
11 2ecf_A Dipeptidyl peptidase IV 100.0 9.6E-49 3.3E-53 458.5 52.3 566 93-726 113-740 (741)
12 2z3z_A Dipeptidyl aminopeptida 100.0 2.5E-48 8.5E-53 452.4 54.0 562 96-725 89-706 (706)
13 1xfd_A DIP, dipeptidyl aminope 100.0 3.5E-49 1.2E-53 460.9 36.9 582 94-727 66-723 (723)
14 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.1E-24 3.9E-29 233.4 19.6 276 411-728 85-367 (386)
15 3ga7_A Acetyl esterase; phosph 99.9 6.4E-23 2.2E-27 214.4 24.5 243 455-727 59-324 (326)
16 2o7r_A CXE carboxylesterase; a 99.9 1.9E-24 6.5E-29 227.3 11.9 284 405-727 4-333 (338)
17 3hxk_A Sugar hydrolase; alpha- 99.9 4E-23 1.4E-27 210.4 21.0 238 462-728 17-269 (276)
18 1vlq_A Acetyl xylan esterase; 99.9 2.5E-23 8.7E-28 218.6 20.0 247 454-727 63-336 (337)
19 4ao6_A Esterase; hydrolase, th 99.9 3E-23 1E-27 208.9 18.8 216 458-726 29-259 (259)
20 3bxp_A Putative lipase/esteras 99.9 8.8E-23 3E-27 208.0 22.2 236 457-725 2-271 (277)
21 3ebl_A Gibberellin receptor GI 99.9 1E-22 3.5E-27 215.6 20.9 246 455-729 60-355 (365)
22 3f67_A Putative dienelactone h 99.9 1.3E-22 4.5E-27 201.8 19.9 225 456-723 3-240 (241)
23 3doh_A Esterase; alpha-beta hy 99.9 1.4E-22 4.8E-27 216.4 20.1 220 458-724 143-378 (380)
24 3qh4_A Esterase LIPW; structur 99.9 6.2E-23 2.1E-27 213.3 15.6 237 455-726 56-316 (317)
25 1mpx_A Alpha-amino acid ester 99.9 5.2E-22 1.8E-26 224.1 21.7 259 454-728 20-357 (615)
26 1l7a_A Cephalosporin C deacety 99.9 2.2E-22 7.6E-27 209.1 17.1 243 455-726 52-317 (318)
27 3fak_A Esterase/lipase, ESTE5; 99.9 4.1E-22 1.4E-26 207.6 18.7 240 455-728 55-311 (322)
28 3bjr_A Putative carboxylestera 99.9 2.4E-22 8.3E-27 205.5 16.5 234 458-724 18-282 (283)
29 2b9v_A Alpha-amino acid ester 99.9 7E-22 2.4E-26 223.7 20.3 258 455-728 33-369 (652)
30 2zsh_A Probable gibberellin re 99.9 3.3E-21 1.1E-25 203.6 23.0 237 455-723 68-350 (351)
31 3ls2_A S-formylglutathione hyd 99.9 3E-22 1E-26 204.4 13.5 246 458-726 14-279 (280)
32 3k2i_A Acyl-coenzyme A thioest 99.9 8.1E-21 2.8E-25 205.7 25.3 223 471-728 144-414 (422)
33 2hm7_A Carboxylesterase; alpha 99.9 3E-21 1E-25 200.2 20.4 240 455-726 44-310 (310)
34 3i6y_A Esterase APC40077; lipa 99.9 4.9E-22 1.7E-26 202.8 14.2 246 458-726 16-279 (280)
35 3ain_A 303AA long hypothetical 99.9 3.5E-21 1.2E-25 200.5 20.8 237 454-726 60-321 (323)
36 1lzl_A Heroin esterase; alpha/ 99.9 3.1E-21 1.1E-25 201.3 19.9 241 455-727 47-318 (323)
37 3fcx_A FGH, esterase D, S-form 99.9 2.7E-22 9.4E-27 204.8 11.2 247 459-726 16-281 (282)
38 2i3d_A AGR_C_3351P, hypothetic 99.9 2.3E-20 7.9E-25 186.8 24.1 212 458-728 20-236 (249)
39 3hlk_A Acyl-coenzyme A thioest 99.9 1.2E-20 4.2E-25 205.3 23.7 223 471-728 160-430 (446)
40 3fcy_A Xylan esterase 1; alpha 99.9 2.4E-21 8.3E-26 204.2 17.2 240 455-723 78-343 (346)
41 3e4d_A Esterase D; S-formylglu 99.9 2.2E-21 7.4E-26 197.8 16.2 247 458-726 14-278 (278)
42 2hdw_A Hypothetical protein PA 99.9 3.9E-21 1.3E-25 204.3 18.7 245 455-725 64-367 (367)
43 2wir_A Pesta, alpha/beta hydro 99.9 5.6E-21 1.9E-25 198.4 19.1 240 456-726 48-312 (313)
44 2c7b_A Carboxylesterase, ESTE1 99.9 1E-20 3.4E-25 196.3 21.0 241 455-727 44-310 (311)
45 1zi8_A Carboxymethylenebutenol 99.9 1.8E-21 6E-26 192.9 14.6 214 460-727 4-234 (236)
46 2o2g_A Dienelactone hydrolase; 99.9 1.2E-20 4.2E-25 184.9 19.2 213 455-726 8-223 (223)
47 3k6k_A Esterase/lipase; alpha/ 99.9 2E-20 6.7E-25 194.9 20.7 237 454-728 55-311 (322)
48 3ksr_A Putative serine hydrola 99.9 6.9E-21 2.4E-25 195.2 16.9 235 458-728 5-244 (290)
49 2wtm_A EST1E; hydrolase; 1.60A 99.8 1.2E-20 4.3E-25 189.0 17.1 235 462-726 4-250 (251)
50 2gop_A Trilobed protease; beta 99.8 1.1E-18 3.9E-23 183.6 32.7 294 87-428 11-330 (347)
51 4b6g_A Putative esterase; hydr 99.8 1.6E-21 5.4E-26 199.4 9.1 246 458-726 21-283 (283)
52 1jkm_A Brefeldin A esterase; s 99.8 7E-20 2.4E-24 193.9 21.0 247 456-725 79-358 (361)
53 3trd_A Alpha/beta hydrolase; c 99.8 8.8E-20 3E-24 177.0 20.0 201 458-721 5-207 (208)
54 2hqs_A Protein TOLB; TOLB, PAL 99.8 4.7E-18 1.6E-22 183.5 34.9 266 98-408 141-409 (415)
55 1jjf_A Xylanase Z, endo-1,4-be 99.8 1.5E-19 5E-24 183.1 20.8 217 458-724 31-260 (268)
56 4e15_A Kynurenine formamidase; 99.8 1.7E-20 6E-25 193.7 14.2 210 459-702 58-280 (303)
57 1jji_A Carboxylesterase; alpha 99.8 2.3E-20 7.8E-25 193.5 14.6 230 456-723 52-310 (311)
58 2uz0_A Esterase, tributyrin es 99.8 2.6E-20 8.9E-25 187.9 14.4 243 457-728 5-259 (263)
59 3pfb_A Cinnamoyl esterase; alp 99.8 1.8E-19 6E-24 182.4 20.0 237 458-724 21-267 (270)
60 1sfr_A Antigen 85-A; alpha/bet 99.8 1.6E-19 5.6E-24 186.2 19.5 246 458-728 8-286 (304)
61 2fuk_A XC6422 protein; A/B hyd 99.8 2.9E-19 9.9E-24 174.9 20.1 208 458-727 9-218 (220)
62 3fnb_A Acylaminoacyl peptidase 99.8 1.7E-19 6E-24 194.1 19.4 241 458-727 134-403 (405)
63 4h0c_A Phospholipase/carboxyle 99.8 3.6E-20 1.2E-24 179.5 12.6 188 485-722 19-209 (210)
64 1jfr_A Lipase; serine hydrolas 99.8 6.5E-19 2.2E-23 177.7 20.9 207 455-728 21-234 (262)
65 3h04_A Uncharacterized protein 99.8 7E-19 2.4E-23 177.9 20.1 232 459-726 3-274 (275)
66 3vis_A Esterase; alpha/beta-hy 99.8 5E-19 1.7E-23 182.9 19.3 203 457-728 67-278 (306)
67 3hju_A Monoglyceride lipase; a 99.8 1E-18 3.5E-23 183.5 20.3 245 455-727 30-314 (342)
68 1r88_A MPT51/MPB51 antigen; AL 99.8 2.8E-19 9.6E-24 182.0 14.3 239 457-727 9-275 (280)
69 1lns_A X-prolyl dipeptidyl ami 99.8 6.1E-19 2.1E-23 202.5 18.4 254 452-728 161-524 (763)
70 3llc_A Putative hydrolase; str 99.8 2.3E-18 7.9E-23 173.7 20.5 236 458-723 10-268 (270)
71 4fbl_A LIPS lipolytic enzyme; 99.8 2.3E-19 7.7E-24 183.1 13.1 213 486-724 49-281 (281)
72 2pbl_A Putative esterase/lipas 99.8 5.4E-19 1.9E-23 178.2 15.2 201 461-706 40-247 (262)
73 4ezi_A Uncharacterized protein 99.8 2.3E-18 7.9E-23 181.2 20.0 252 454-727 38-372 (377)
74 3mve_A FRSA, UPF0255 protein V 99.8 1.5E-18 5.1E-23 186.6 18.5 235 456-726 165-414 (415)
75 3d7r_A Esterase; alpha/beta fo 99.8 1.2E-18 4.1E-23 181.8 16.6 222 472-726 84-323 (326)
76 1ufo_A Hypothetical protein TT 99.8 5.7E-18 1.9E-22 167.4 20.4 217 467-726 10-236 (238)
77 3og9_A Protein YAHD A copper i 99.8 2E-18 6.7E-23 167.7 16.7 185 485-724 14-208 (209)
78 3d0k_A Putative poly(3-hydroxy 99.8 9.3E-18 3.2E-22 173.2 22.4 228 459-724 24-287 (304)
79 2qm0_A BES; alpha-beta structu 99.8 5.8E-19 2E-23 179.3 12.6 231 458-721 17-272 (275)
80 1vkh_A Putative serine hydrola 99.8 1.5E-19 5.2E-24 183.6 8.1 208 485-721 38-272 (273)
81 4fhz_A Phospholipase/carboxyle 99.8 3E-18 1E-22 173.5 17.3 206 468-726 48-267 (285)
82 3pe7_A Oligogalacturonate lyas 99.8 6.8E-17 2.3E-21 172.7 28.9 261 146-446 40-337 (388)
83 1fj2_A Protein (acyl protein t 99.8 8.1E-18 2.8E-22 165.9 19.8 201 476-727 14-230 (232)
84 3pe6_A Monoglyceride lipase; a 99.8 1.3E-17 4.3E-22 171.1 22.0 237 463-727 21-296 (303)
85 3iii_A COCE/NOND family hydrol 99.8 5.7E-18 2E-22 186.9 19.4 241 458-728 40-323 (560)
86 3pe7_A Oligogalacturonate lyas 99.8 8.1E-17 2.8E-21 172.1 27.3 303 94-429 41-382 (388)
87 1dqz_A 85C, protein (antigen 8 99.8 5E-18 1.7E-22 173.0 16.5 243 458-727 5-280 (280)
88 3u0v_A Lysophospholipase-like 99.8 5.7E-18 2E-22 168.0 15.7 197 485-728 20-234 (239)
89 2ecf_A Dipeptidyl peptidase IV 99.8 1.3E-16 4.5E-21 186.0 29.5 296 93-429 41-413 (741)
90 3bdi_A Uncharacterized protein 99.8 2.2E-17 7.6E-22 159.5 18.3 199 460-722 5-205 (207)
91 1auo_A Carboxylesterase; hydro 99.8 1.6E-17 5.4E-22 162.1 17.3 191 485-726 11-218 (218)
92 2hqs_A Protein TOLB; TOLB, PAL 99.7 7.3E-16 2.5E-20 166.3 30.9 242 151-429 141-385 (415)
93 3cn9_A Carboxylesterase; alpha 99.7 3.1E-17 1.1E-21 161.2 18.4 191 483-725 19-226 (226)
94 1gkl_A Endo-1,4-beta-xylanase 99.7 2.5E-17 8.7E-22 168.8 18.4 210 458-703 40-272 (297)
95 2r8b_A AGR_C_4453P, uncharacte 99.7 1.2E-17 4.1E-22 167.1 15.0 184 486-727 60-250 (251)
96 4a5s_A Dipeptidyl peptidase 4 99.7 1.7E-16 6E-21 184.7 26.9 303 93-429 21-398 (740)
97 3b5e_A MLL8374 protein; NP_108 99.7 1.2E-17 4E-22 163.9 14.5 199 469-726 15-218 (223)
98 3rm3_A MGLP, thermostable mono 99.7 9.3E-18 3.2E-22 169.7 13.9 214 486-726 38-270 (270)
99 3dkr_A Esterase D; alpha beta 99.7 2.4E-17 8.3E-22 164.1 16.7 216 485-724 19-248 (251)
100 4f0j_A Probable hydrolytic enz 99.7 7.7E-17 2.6E-21 166.4 20.5 239 456-723 17-313 (315)
101 2qru_A Uncharacterized protein 99.7 1.7E-16 5.8E-21 161.0 22.1 228 466-723 11-273 (274)
102 1k8q_A Triacylglycerol lipase, 99.7 4.2E-17 1.4E-21 173.4 17.1 148 455-604 23-184 (377)
103 3i2k_A Cocaine esterase; alpha 99.7 1.5E-17 5.2E-22 186.2 14.0 244 458-728 8-325 (587)
104 3c5m_A Oligogalacturonate lyas 99.7 2.4E-16 8.2E-21 168.8 22.7 247 144-429 38-327 (396)
105 1tht_A Thioesterase; 2.10A {Vi 99.7 1.1E-16 3.7E-21 164.9 18.8 237 459-723 7-263 (305)
106 2h1i_A Carboxylesterase; struc 99.7 1.3E-16 4.3E-21 156.8 18.4 184 486-725 36-226 (226)
107 3g8y_A SUSD/RAGB-associated es 99.7 8.6E-18 2.9E-22 179.6 10.6 149 455-606 83-262 (391)
108 3nuz_A Putative acetyl xylan e 99.7 9.1E-18 3.1E-22 179.7 10.8 149 454-605 87-266 (398)
109 4fle_A Esterase; structural ge 99.7 3.4E-17 1.2E-21 158.0 12.6 191 488-728 2-196 (202)
110 2z3z_A Dipeptidyl aminopeptida 99.7 6.6E-16 2.3E-20 179.0 24.6 290 94-429 29-389 (706)
111 1z68_A Fibroblast activation p 99.7 3E-16 1E-20 182.3 21.1 298 93-429 20-391 (719)
112 2fx5_A Lipase; alpha-beta hydr 99.7 3.2E-16 1.1E-20 157.4 18.5 198 455-726 21-229 (258)
113 3h2g_A Esterase; xanthomonas o 99.7 6.3E-16 2.2E-20 165.8 21.2 150 456-606 43-212 (397)
114 1xfd_A DIP, dipeptidyl aminope 99.7 7.6E-16 2.6E-20 179.0 23.6 298 92-429 20-393 (723)
115 4f21_A Carboxylesterase/phosph 99.7 3.3E-16 1.1E-20 155.2 16.7 215 458-727 14-246 (246)
116 2qjw_A Uncharacterized protein 99.7 3.2E-16 1.1E-20 147.2 15.7 173 486-722 2-174 (176)
117 2gzs_A IROE protein; enterobac 99.7 4.2E-16 1.5E-20 158.0 16.8 223 458-723 12-264 (278)
118 2ojh_A Uncharacterized protein 99.7 1.6E-14 5.5E-19 147.1 28.8 257 114-417 21-292 (297)
119 3d59_A Platelet-activating fac 99.7 3.5E-16 1.2E-20 166.9 15.8 208 469-728 81-353 (383)
120 1imj_A CIB, CCG1-interacting f 99.7 4.7E-17 1.6E-21 157.8 7.7 192 467-723 14-208 (210)
121 3c8d_A Enterochelin esterase; 99.7 3E-16 1E-20 167.5 14.1 223 458-725 167-398 (403)
122 3guu_A Lipase A; protein struc 99.7 1.1E-15 3.9E-20 162.7 18.1 251 455-728 71-409 (462)
123 1qlw_A Esterase; anisotropic r 99.7 8.5E-16 2.9E-20 160.1 16.8 202 471-726 49-322 (328)
124 3vdx_A Designed 16NM tetrahedr 99.7 6.8E-15 2.3E-19 160.4 23.8 229 460-726 4-281 (456)
125 2y6u_A Peroxisomal membrane pr 99.7 2.6E-16 8.8E-21 169.0 12.3 239 464-726 25-346 (398)
126 3c5m_A Oligogalacturonate lyas 99.7 1.1E-14 3.7E-19 155.8 24.3 296 93-429 40-382 (396)
127 3ia2_A Arylesterase; alpha-bet 99.7 3.7E-15 1.3E-19 150.6 19.4 221 464-722 3-270 (271)
128 2qs9_A Retinoblastoma-binding 99.6 1.8E-15 6.2E-20 144.7 15.6 183 487-726 3-187 (194)
129 2pl5_A Homoserine O-acetyltran 99.6 5.1E-15 1.7E-19 156.7 20.1 221 487-723 45-364 (366)
130 1l0q_A Surface layer protein; 99.6 3.5E-13 1.2E-17 143.9 33.4 322 97-481 40-386 (391)
131 1a8q_A Bromoperoxidase A1; hal 99.6 4.1E-14 1.4E-18 143.2 24.5 223 464-722 3-273 (274)
132 3kxp_A Alpha-(N-acetylaminomet 99.6 1.3E-15 4.5E-20 157.6 13.5 214 468-722 56-313 (314)
133 1a8s_A Chloroperoxidase F; hal 99.6 1.9E-14 6.4E-19 145.6 21.6 221 464-722 3-272 (273)
134 1uxo_A YDEN protein; hydrolase 99.6 5.5E-15 1.9E-19 141.0 16.6 183 487-726 3-188 (192)
135 3r0v_A Alpha/beta hydrolase fo 99.6 4.2E-15 1.4E-19 149.0 16.2 211 464-722 7-261 (262)
136 3dqz_A Alpha-hydroxynitrIle ly 99.6 7E-15 2.4E-19 147.0 17.6 208 489-725 5-258 (258)
137 1k32_A Tricorn protease; prote 99.6 3.4E-13 1.2E-17 163.1 35.5 101 93-207 17-125 (1045)
138 3sty_A Methylketone synthase 1 99.6 2.7E-15 9.3E-20 150.9 14.4 209 486-723 10-265 (267)
139 3v48_A Aminohydrolase, putativ 99.6 2.1E-15 7E-20 152.5 13.4 209 486-725 13-261 (268)
140 3i1i_A Homoserine O-acetyltran 99.6 2.2E-15 7.4E-20 160.1 14.3 251 460-726 13-374 (377)
141 1a88_A Chloroperoxidase L; hal 99.6 3E-14 1E-18 144.3 21.7 223 464-722 3-274 (275)
142 1brt_A Bromoperoxidase A2; hal 99.6 1E-14 3.5E-19 148.0 17.8 203 489-722 24-276 (277)
143 2yys_A Proline iminopeptidase- 99.6 8.9E-15 3.1E-19 149.3 17.1 224 463-723 6-275 (286)
144 1zoi_A Esterase; alpha/beta hy 99.6 2.7E-14 9.2E-19 144.8 20.1 223 464-722 4-275 (276)
145 3om8_A Probable hydrolase; str 99.6 1.1E-14 3.6E-19 147.0 16.9 220 464-722 9-265 (266)
146 1tqh_A Carboxylesterase precur 99.6 3.2E-15 1.1E-19 149.0 12.9 204 488-723 16-244 (247)
147 3u1t_A DMMA haloalkane dehalog 99.6 5.9E-15 2E-19 151.7 15.0 222 468-728 17-300 (309)
148 3e0x_A Lipase-esterase related 99.6 3.2E-15 1.1E-19 147.9 12.4 184 486-704 14-230 (245)
149 3i28_A Epoxide hydrolase 2; ar 99.6 1.5E-14 5.1E-19 162.3 18.8 125 459-602 237-361 (555)
150 1q0r_A RDMC, aclacinomycin met 99.6 3.4E-14 1.2E-18 145.9 19.8 122 467-603 8-129 (298)
151 3oos_A Alpha/beta hydrolase fa 99.6 2.2E-15 7.5E-20 152.2 10.6 190 487-704 22-263 (278)
152 3fob_A Bromoperoxidase; struct 99.6 2.9E-14 9.9E-19 145.0 18.8 205 488-722 27-280 (281)
153 4dnp_A DAD2; alpha/beta hydrol 99.6 1E-14 3.5E-19 146.6 15.2 210 487-723 19-268 (269)
154 3azo_A Aminopeptidase; POP fam 99.6 6.8E-14 2.3E-18 160.8 23.7 260 98-393 88-376 (662)
155 2ocg_A Valacyclovir hydrolase; 99.6 1.7E-14 5.6E-19 144.4 16.2 219 468-721 10-253 (254)
156 3qit_A CURM TE, polyketide syn 99.6 8.2E-15 2.8E-19 148.4 14.1 122 467-605 11-132 (286)
157 1mtz_A Proline iminopeptidase; 99.6 1.4E-14 4.9E-19 148.2 15.6 121 468-604 13-133 (293)
158 2r11_A Carboxylesterase NP; 26 99.6 2.4E-14 8.1E-19 147.6 17.0 227 459-722 45-305 (306)
159 1l0q_A Surface layer protein; 99.6 2.5E-12 8.5E-17 137.2 33.4 238 144-429 34-273 (391)
160 1wm1_A Proline iminopeptidase; 99.6 3.5E-14 1.2E-18 147.0 18.3 124 461-602 16-139 (317)
161 1ycd_A Hypothetical 27.3 kDa p 99.6 1E-14 3.6E-19 144.9 13.6 211 486-727 3-240 (243)
162 3hss_A Putative bromoperoxidas 99.6 5E-15 1.7E-19 151.3 11.6 207 486-723 41-290 (293)
163 3qvm_A OLEI00960; structural g 99.6 2.3E-15 7.8E-20 152.5 8.8 210 488-725 28-279 (282)
164 3fsg_A Alpha/beta superfamily 99.6 3.4E-15 1.2E-19 150.4 9.4 208 487-725 20-269 (272)
165 2xua_A PCAD, 3-oxoadipate ENOL 99.6 2.1E-14 7E-19 144.9 14.9 219 467-722 9-263 (266)
166 1qe3_A PNB esterase, para-nitr 99.6 7E-16 2.4E-20 168.5 4.2 218 471-705 82-316 (489)
167 4g9e_A AHL-lactonase, alpha/be 99.6 3.9E-15 1.3E-19 150.6 9.1 233 460-728 4-273 (279)
168 1hkh_A Gamma lactamase; hydrol 99.6 2.6E-14 8.9E-19 145.1 15.2 203 489-722 24-278 (279)
169 2b61_A Homoserine O-acetyltran 99.6 1.4E-14 4.6E-19 154.2 13.6 220 488-723 59-376 (377)
170 2puj_A 2-hydroxy-6-OXO-6-pheny 99.6 2.2E-14 7.4E-19 146.4 14.0 208 488-723 33-285 (286)
171 2xdw_A Prolyl endopeptidase; a 99.6 7.8E-13 2.7E-17 153.1 28.8 260 94-387 130-416 (710)
172 3o4h_A Acylamino-acid-releasin 99.6 1.6E-13 5.4E-18 155.2 22.3 240 144-429 24-274 (582)
173 2vat_A Acetyl-COA--deacetylcep 99.6 1.6E-14 5.6E-19 157.3 13.6 139 463-604 82-236 (444)
174 1j1i_A META cleavage compound 99.5 2.5E-14 8.6E-19 146.8 13.9 227 467-730 23-288 (296)
175 1c4x_A BPHD, protein (2-hydrox 99.5 1.7E-14 5.9E-19 147.0 12.3 223 466-723 13-284 (285)
176 1azw_A Proline iminopeptidase; 99.5 1.4E-13 4.9E-18 142.1 19.3 124 461-602 13-136 (313)
177 3bdv_A Uncharacterized protein 99.5 1.1E-13 3.9E-18 131.7 16.9 173 486-725 15-188 (191)
178 3iuj_A Prolyl endopeptidase; h 99.5 9.5E-13 3.2E-17 151.7 27.8 262 95-393 135-412 (693)
179 3gff_A IROE-like serine hydrol 99.5 4.9E-14 1.7E-18 145.6 14.7 226 458-726 11-267 (331)
180 2gop_A Trilobed protease; beta 99.5 1.8E-12 6.2E-17 135.9 27.1 236 142-428 15-290 (347)
181 3s25_A Hypothetical 7-bladed b 99.5 1.2E-11 3.9E-16 126.0 31.6 265 94-430 19-292 (302)
182 3g9x_A Haloalkane dehalogenase 99.5 1.8E-14 6.2E-19 147.4 10.7 115 468-602 18-132 (299)
183 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 1.1E-13 3.8E-18 141.3 16.6 206 489-722 37-287 (289)
184 1k32_A Tricorn protease; prote 99.5 1.3E-12 4.6E-17 157.9 28.8 278 94-429 301-635 (1045)
185 3vgz_A Uncharacterized protein 99.5 9.1E-12 3.1E-16 130.6 31.2 269 97-417 49-334 (353)
186 2bkl_A Prolyl endopeptidase; m 99.5 1.2E-12 4.1E-17 151.1 26.5 251 148-429 74-349 (695)
187 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 1.3E-13 4.4E-18 141.0 16.1 221 467-722 20-288 (291)
188 3p2m_A Possible hydrolase; alp 99.5 3.5E-14 1.2E-18 148.1 11.8 202 488-722 81-328 (330)
189 2ojh_A Uncharacterized protein 99.5 3.1E-12 1.1E-16 130.0 26.1 227 166-429 20-256 (297)
190 3nwo_A PIP, proline iminopepti 99.5 1.2E-13 4E-18 144.1 15.6 125 468-602 36-160 (330)
191 1iup_A META-cleavage product h 99.5 3.5E-14 1.2E-18 144.6 11.1 219 468-723 13-272 (282)
192 2rau_A Putative esterase; NP_3 99.5 3.7E-14 1.3E-18 149.4 11.5 113 486-601 48-178 (354)
193 2wfl_A Polyneuridine-aldehyde 99.5 2.5E-13 8.6E-18 136.7 17.0 106 486-602 8-113 (264)
194 2xmz_A Hydrolase, alpha/beta h 99.5 1E-13 3.6E-18 139.9 13.9 206 487-724 15-266 (269)
195 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 7.5E-14 2.6E-18 143.1 12.8 228 466-731 15-300 (302)
196 1xkl_A SABP2, salicylic acid-b 99.5 4.7E-13 1.6E-17 135.4 18.0 212 488-725 4-260 (273)
197 1b6g_A Haloalkane dehalogenase 99.5 1.8E-13 6.1E-18 141.4 15.1 117 470-602 34-150 (310)
198 1yr2_A Prolyl oligopeptidase; 99.5 3.9E-12 1.3E-16 147.9 28.0 264 94-393 168-448 (741)
199 3bf7_A Esterase YBFF; thioeste 99.5 1.3E-13 4.4E-18 138.0 13.4 204 487-723 15-254 (255)
200 2q0x_A Protein DUF1749, unchar 99.5 3E-13 1E-17 141.1 16.6 105 486-604 36-146 (335)
201 2e3j_A Epoxide hydrolase EPHB; 99.5 2.3E-13 7.8E-18 143.6 15.4 122 467-603 10-131 (356)
202 2qvb_A Haloalkane dehalogenase 99.5 1.1E-13 3.6E-18 141.4 12.4 120 467-604 15-135 (297)
203 2xt0_A Haloalkane dehalogenase 99.5 4.4E-13 1.5E-17 137.5 17.0 117 470-602 33-149 (297)
204 4g56_B MGC81050 protein; prote 99.5 4E-12 1.4E-16 134.0 24.7 251 140-429 41-299 (357)
205 2cjp_A Epoxide hydrolase; HET: 99.5 4.3E-13 1.5E-17 139.6 17.1 120 467-601 18-137 (328)
206 3r40_A Fluoroacetate dehalogen 99.5 7.3E-13 2.5E-17 135.7 18.3 120 466-602 19-138 (306)
207 4fol_A FGH, S-formylglutathion 99.5 2.7E-13 9.2E-18 137.6 14.5 248 458-727 13-298 (299)
208 3kda_A CFTR inhibitory factor 99.5 2E-13 6.8E-18 139.9 13.5 114 467-602 17-131 (301)
209 3bwx_A Alpha/beta hydrolase; Y 99.5 9.2E-13 3.1E-17 134.1 18.4 124 460-600 6-129 (285)
210 3vgz_A Uncharacterized protein 99.5 1.7E-10 5.7E-15 120.9 35.9 244 144-429 43-301 (353)
211 1wom_A RSBQ, sigma factor SIGB 99.5 1.1E-13 3.9E-18 139.8 10.9 210 488-725 20-271 (271)
212 1isp_A Lipase; alpha/beta hydr 99.5 1.8E-13 6.2E-18 129.0 11.6 169 488-724 3-176 (181)
213 3c6x_A Hydroxynitrilase; atomi 99.5 4.2E-13 1.4E-17 134.5 14.5 210 488-723 3-255 (257)
214 3ow8_A WD repeat-containing pr 99.5 2.7E-11 9.4E-16 125.5 28.7 239 140-429 79-319 (321)
215 3s25_A Hypothetical 7-bladed b 99.5 1.7E-11 5.7E-16 124.8 26.2 231 94-391 58-298 (302)
216 3fla_A RIFR; alpha-beta hydrol 99.5 2.5E-13 8.4E-18 136.6 12.4 208 485-725 17-250 (267)
217 2qmq_A Protein NDRG2, protein 99.5 5.2E-13 1.8E-17 135.9 15.0 125 468-603 19-146 (286)
218 2d81_A PHB depolymerase; alpha 99.5 7E-14 2.4E-18 142.6 7.9 152 563-726 6-177 (318)
219 3afi_E Haloalkane dehalogenase 99.5 6.9E-13 2.4E-17 137.4 15.6 114 468-601 15-128 (316)
220 3u4y_A Uncharacterized protein 99.4 4.4E-11 1.5E-15 124.3 29.1 282 99-429 8-302 (331)
221 3pic_A CIP2; alpha/beta hydrol 99.4 9.8E-13 3.4E-17 133.3 15.2 220 470-728 90-348 (375)
222 4gqb_B Methylosome protein 50; 99.4 3.9E-11 1.3E-15 125.6 28.0 249 142-429 31-287 (344)
223 1m33_A BIOH protein; alpha-bet 99.4 2.9E-13 9.9E-18 135.6 10.7 199 488-723 12-255 (258)
224 2xe4_A Oligopeptidase B; hydro 99.4 2.1E-11 7.3E-16 141.3 26.0 256 94-388 179-461 (751)
225 3bws_A Protein LP49; two-domai 99.4 1.3E-10 4.3E-15 125.8 30.5 279 100-429 133-430 (433)
226 1pja_A Palmitoyl-protein thioe 99.4 4.3E-13 1.5E-17 137.8 10.3 104 485-603 33-139 (302)
227 1ehy_A Protein (soluble epoxid 99.4 1E-11 3.4E-16 127.1 20.3 117 467-601 16-132 (294)
228 3zwl_B Eukaryotic translation 99.4 5.8E-10 2E-14 117.2 34.3 248 142-429 75-344 (369)
229 4g4g_A 4-O-methyl-glucuronoyl 99.4 4.1E-12 1.4E-16 130.1 16.5 222 471-729 124-383 (433)
230 4gqb_B Methylosome protein 50; 99.4 3E-11 1E-15 126.5 23.7 237 143-429 84-329 (344)
231 1pby_B Quinohemoprotein amine 99.4 8.3E-11 2.8E-15 122.2 26.9 243 144-429 36-308 (337)
232 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 2.1E-12 7.2E-17 129.4 13.7 116 468-603 7-123 (264)
233 2psd_A Renilla-luciferin 2-mon 99.4 2.2E-12 7.6E-17 133.6 13.3 115 467-600 28-143 (318)
234 4h5i_A Guanine nucleotide-exch 99.4 1.2E-10 4E-15 123.1 26.8 207 144-385 136-343 (365)
235 1r3d_A Conserved hypothetical 99.4 4.4E-12 1.5E-16 127.5 15.0 103 488-602 16-121 (264)
236 2ynn_A Coatomer subunit beta'; 99.4 5.2E-10 1.8E-14 114.8 29.9 237 143-429 15-257 (304)
237 3bws_A Protein LP49; two-domai 99.4 2E-10 6.9E-15 124.2 28.0 240 145-429 126-388 (433)
238 1nr0_A Actin interacting prote 99.4 1.1E-10 3.7E-15 132.6 26.8 239 144-429 21-268 (611)
239 3hfq_A Uncharacterized protein 99.4 5.1E-10 1.8E-14 117.1 30.1 278 114-429 17-317 (347)
240 1ukc_A ESTA, esterase; fungi, 99.4 5.1E-13 1.7E-17 146.9 7.1 223 472-704 86-327 (522)
241 4ery_A WD repeat-containing pr 99.4 1.2E-09 4.2E-14 112.3 32.3 227 142-413 66-296 (312)
242 4ery_A WD repeat-containing pr 99.3 4.9E-10 1.7E-14 115.4 28.7 239 142-429 24-266 (312)
243 3b12_A Fluoroacetate dehalogen 99.0 8.9E-14 3E-18 142.4 0.0 109 487-604 24-132 (304)
244 3qmv_A Thioesterase, REDJ; alp 99.3 5.2E-13 1.8E-17 135.6 5.7 218 458-705 14-264 (280)
245 1got_B GT-beta; complex (GTP-b 99.3 1.1E-09 3.9E-14 114.3 30.8 240 142-429 56-299 (340)
246 1gxr_A ESG1, transducin-like e 99.3 1.2E-09 4E-14 113.3 30.2 234 142-429 98-335 (337)
247 1nr0_A Actin interacting prote 99.3 3.6E-10 1.2E-14 128.3 27.9 240 97-391 27-276 (611)
248 1nir_A Nitrite reductase; hemo 99.3 5.5E-09 1.9E-13 116.1 36.9 287 144-477 181-498 (543)
249 3u4y_A Uncharacterized protein 99.3 3.5E-10 1.2E-14 117.4 25.5 240 147-429 3-250 (331)
250 2vdu_B TRNA (guanine-N(7)-)-me 99.3 7.1E-10 2.4E-14 120.8 28.4 240 143-429 104-391 (450)
251 1vyh_C Platelet-activating fac 99.3 1.5E-09 5E-14 116.7 30.5 238 141-429 108-367 (410)
252 2vdu_B TRNA (guanine-N(7)-)-me 99.3 6.6E-10 2.3E-14 121.0 28.2 202 190-429 105-337 (450)
253 1gxr_A ESG1, transducin-like e 99.3 1.1E-09 3.9E-14 113.4 28.3 235 143-429 53-294 (337)
254 3l80_A Putative uncharacterize 99.3 6E-13 2.1E-17 135.8 3.1 104 488-602 41-144 (292)
255 3mkq_A Coatomer beta'-subunit; 99.3 6.4E-10 2.2E-14 130.7 28.9 237 143-429 15-257 (814)
256 3zwl_B Eukaryotic translation 99.3 2.8E-09 9.7E-14 111.9 30.6 239 142-416 33-279 (369)
257 4i19_A Epoxide hydrolase; stru 99.3 1.5E-10 5E-15 123.0 20.6 121 467-603 75-204 (388)
258 4g56_B MGC81050 protein; prote 99.3 1.8E-10 6.1E-15 121.4 21.2 241 142-430 95-342 (357)
259 1erj_A Transcriptional repress 99.3 4E-09 1.4E-13 112.5 31.7 238 143-429 125-387 (393)
260 3vl1_A 26S proteasome regulato 99.3 1.9E-09 6.7E-14 115.8 29.0 237 145-429 60-320 (420)
261 1erj_A Transcriptional repress 99.3 2.2E-09 7.5E-14 114.6 28.7 236 143-429 66-339 (393)
262 2ymu_A WD-40 repeat protein; u 99.3 2.5E-09 8.6E-14 120.2 30.7 231 142-428 345-577 (577)
263 3ow8_A WD repeat-containing pr 99.3 4.2E-09 1.4E-13 108.9 29.7 238 141-429 32-277 (321)
264 2pm9_A Protein WEB1, protein t 99.2 2.9E-10 9.9E-15 122.0 21.1 247 142-429 68-335 (416)
265 2ynn_A Coatomer subunit beta'; 99.2 9.7E-09 3.3E-13 105.2 31.6 238 143-429 57-300 (304)
266 2pm9_A Protein WEB1, protein t 99.2 3.5E-10 1.2E-14 121.4 21.3 257 143-429 14-292 (416)
267 1thg_A Lipase; hydrolase(carbo 99.2 4.8E-12 1.6E-16 139.7 6.5 223 472-704 106-359 (544)
268 3mkq_A Coatomer beta'-subunit; 99.2 3.1E-09 1.1E-13 124.8 30.4 274 96-429 21-300 (814)
269 1nir_A Nitrite reductase; hemo 99.2 4.4E-09 1.5E-13 116.9 29.8 250 144-429 224-512 (543)
270 2wj6_A 1H-3-hydroxy-4-oxoquina 99.2 9.3E-12 3.2E-16 126.0 7.5 100 488-601 27-127 (276)
271 1vyh_C Platelet-activating fac 99.2 7E-09 2.4E-13 111.3 30.2 238 141-429 150-409 (410)
272 1r5m_A SIR4-interacting protei 99.2 5.5E-09 1.9E-13 112.0 29.0 235 142-429 150-423 (425)
273 3fle_A SE_1780 protein; struct 99.2 1.5E-10 5.1E-15 114.1 14.9 212 488-721 6-247 (249)
274 1got_B GT-beta; complex (GTP-b 99.2 2.1E-08 7.2E-13 104.6 32.4 223 143-412 99-328 (340)
275 1ri6_A Putative isomerase YBHE 99.2 4E-09 1.4E-13 109.6 26.6 249 144-429 40-308 (343)
276 4gga_A P55CDC, cell division c 99.2 1.6E-08 5.5E-13 108.9 32.0 266 117-429 127-393 (420)
277 2ymu_A WD-40 repeat protein; u 99.2 5.9E-09 2E-13 117.2 29.5 233 142-429 304-537 (577)
278 1llf_A Lipase 3; candida cylin 99.2 2.6E-12 8.8E-17 141.6 1.6 222 472-704 98-346 (534)
279 2pbi_B Guanine nucleotide-bind 99.2 1.4E-08 4.9E-13 106.5 30.0 240 141-429 64-313 (354)
280 4aez_A CDC20, WD repeat-contai 99.2 1.4E-08 4.8E-13 108.5 30.4 260 117-429 115-378 (401)
281 3scy_A Hypothetical bacterial 99.2 2.1E-08 7.2E-13 105.4 31.1 285 112-429 26-337 (361)
282 2j04_A TAU60, YPL007P, hypothe 99.2 2.2E-09 7.4E-14 116.3 23.4 196 190-427 88-295 (588)
283 1jmx_B Amine dehydrogenase; ox 99.2 7.3E-09 2.5E-13 108.0 26.9 288 99-429 9-323 (349)
284 1r5m_A SIR4-interacting protei 99.2 8.9E-09 3.1E-13 110.3 28.2 236 142-429 109-359 (425)
285 2ogt_A Thermostable carboxyles 99.2 4.1E-12 1.4E-16 139.0 1.7 221 466-705 81-316 (498)
286 3ei3_B DNA damage-binding prot 99.2 6.7E-09 2.3E-13 110.2 26.6 242 143-429 75-337 (383)
287 3qyj_A ALR0039 protein; alpha/ 99.2 8.4E-10 2.9E-14 112.5 18.5 118 467-601 12-129 (291)
288 1pgu_A Actin interacting prote 99.2 1.8E-09 6.2E-14 122.2 23.3 240 142-429 19-281 (615)
289 4h5i_A Guanine nucleotide-exch 99.2 3.3E-09 1.1E-13 112.0 23.6 245 147-430 77-342 (365)
290 1ri6_A Putative isomerase YBHE 99.2 1.1E-09 3.8E-14 113.9 19.7 256 96-388 45-313 (343)
291 1k8k_C P40, ARP2/3 complex 41 99.2 3.8E-09 1.3E-13 111.3 24.0 243 143-429 10-272 (372)
292 2h7c_A Liver carboxylesterase 99.2 2.3E-11 8E-16 134.5 6.8 133 466-605 95-234 (542)
293 1pby_B Quinohemoprotein amine 99.1 6E-10 2E-14 115.6 15.8 251 96-395 41-320 (337)
294 3hfq_A Uncharacterized protein 99.1 1.4E-09 4.8E-14 113.8 18.3 252 97-388 48-322 (347)
295 3scy_A Hypothetical bacterial 99.1 1.5E-08 5E-13 106.6 26.2 252 95-388 56-342 (361)
296 3vl1_A 26S proteasome regulato 99.1 3.4E-08 1.2E-12 106.0 29.4 242 141-429 139-417 (420)
297 3fm0_A Protein CIAO1; WDR39,SG 99.1 2.4E-08 8.1E-13 104.4 27.2 249 140-429 60-333 (345)
298 1k8k_C P40, ARP2/3 complex 41 99.1 1.1E-08 3.9E-13 107.6 24.9 208 142-385 53-274 (372)
299 3c5v_A PME-1, protein phosphat 99.1 7.5E-10 2.6E-14 114.4 15.1 102 487-602 37-145 (316)
300 3g4e_A Regucalcin; six bladed 99.1 1.5E-08 5.3E-13 103.4 24.8 235 144-419 15-264 (297)
301 2j04_A TAU60, YPL007P, hypothe 99.1 1.9E-09 6.5E-14 116.8 18.4 238 142-429 86-360 (588)
302 3fm0_A Protein CIAO1; WDR39,SG 99.1 6.6E-09 2.3E-13 108.7 22.2 241 143-429 18-281 (345)
303 2xzm_R RACK1; ribosome, transl 99.1 1.6E-08 5.3E-13 105.7 24.8 237 141-429 76-338 (343)
304 3ds8_A LIN2722 protein; unkonw 99.1 5.5E-10 1.9E-14 111.3 12.8 154 549-725 77-243 (254)
305 3ei3_B DNA damage-binding prot 99.1 4.6E-08 1.6E-12 103.6 28.6 244 141-429 118-380 (383)
306 3f3f_A Nucleoporin SEH1; struc 99.1 5.7E-08 1.9E-12 100.6 28.8 253 140-429 10-335 (351)
307 3dwl_C Actin-related protein 2 99.1 1.1E-09 3.9E-14 115.8 15.4 243 144-429 14-279 (377)
308 1jof_A Carboxy-CIS,CIS-muconat 99.1 4.4E-08 1.5E-12 103.3 27.5 259 144-429 42-339 (365)
309 2pbi_B Guanine nucleotide-bind 99.1 3.8E-08 1.3E-12 103.3 26.7 223 144-412 109-342 (354)
310 3frx_A Guanine nucleotide-bind 99.1 5.1E-08 1.8E-12 100.6 27.1 235 141-429 65-315 (319)
311 2ha2_A ACHE, acetylcholinester 99.1 7.6E-11 2.6E-15 130.4 5.7 131 466-603 93-232 (543)
312 1kez_A Erythronolide synthase; 99.1 2.1E-10 7.2E-15 117.6 8.5 209 485-728 64-285 (300)
313 2mad_H Methylamine dehydrogena 99.1 2.6E-07 8.8E-12 97.4 32.4 288 95-429 27-348 (373)
314 1sq9_A Antiviral protein SKI8; 99.1 1.4E-08 4.7E-13 108.1 22.7 245 142-429 63-393 (397)
315 1qks_A Cytochrome CD1 nitrite 99.1 6.2E-07 2.1E-11 99.5 36.6 323 98-477 163-522 (567)
316 3jrp_A Fusion protein of prote 99.0 3.2E-08 1.1E-12 104.2 25.2 245 141-429 11-285 (379)
317 3frx_A Guanine nucleotide-bind 99.0 1.7E-07 5.9E-12 96.6 30.2 236 140-429 16-265 (319)
318 4ggc_A P55CDC, cell division c 99.0 4.5E-07 1.5E-11 92.9 32.6 266 117-429 47-313 (318)
319 3ils_A PKS, aflatoxin biosynth 99.0 9.2E-10 3.2E-14 110.5 11.9 101 485-601 18-121 (265)
320 3sjl_D Methylamine dehydrogena 99.0 3.1E-07 1E-11 95.7 31.0 287 93-429 37-361 (386)
321 3i2n_A WD repeat-containing pr 99.0 3.8E-08 1.3E-12 102.8 24.6 242 143-429 67-351 (357)
322 3g02_A Epoxide hydrolase; alph 99.0 1.7E-09 5.9E-14 115.1 14.2 120 468-602 93-219 (408)
323 2ghs_A AGR_C_1268P; regucalcin 99.0 9.2E-08 3.2E-12 99.0 27.0 243 144-429 51-314 (326)
324 2aq5_A Coronin-1A; WD40 repeat 99.0 4.8E-08 1.7E-12 104.3 25.3 242 146-429 39-297 (402)
325 4gga_A P55CDC, cell division c 99.0 2.3E-07 7.9E-12 99.7 30.7 251 128-429 94-351 (420)
326 3dm0_A Maltose-binding peripla 99.0 3.3E-08 1.1E-12 113.9 25.5 239 141-429 430-691 (694)
327 2fj0_A JuvenIle hormone estera 99.0 1.2E-10 4.3E-15 128.8 4.7 126 471-603 90-233 (551)
328 1pgu_A Actin interacting prote 99.0 9.7E-08 3.3E-12 107.9 28.7 274 95-429 25-326 (615)
329 3e5z_A Putative gluconolactona 99.0 3.1E-08 1.1E-12 101.0 22.2 233 144-429 30-284 (296)
330 3i2n_A WD repeat-containing pr 99.0 2.1E-08 7.2E-13 104.8 21.4 243 142-429 19-289 (357)
331 2aq5_A Coronin-1A; WD40 repeat 99.0 3.2E-08 1.1E-12 105.8 22.9 245 140-429 80-340 (402)
332 2oiz_A Aromatic amine dehydrog 99.0 8.3E-07 2.8E-11 93.2 33.4 287 95-446 10-342 (361)
333 4aez_A CDC20, WD repeat-contai 99.0 2.7E-07 9.2E-12 98.5 29.8 235 144-429 96-334 (401)
334 3sfz_A APAF-1, apoptotic pepti 99.0 5.6E-08 1.9E-12 119.9 27.6 244 141-429 615-911 (1249)
335 1yfq_A Cell cycle arrest prote 99.0 6.5E-08 2.2E-12 100.4 23.5 245 141-429 11-280 (342)
336 3lp5_A Putative cell surface h 99.0 1E-08 3.4E-13 101.0 16.1 198 489-722 5-232 (250)
337 2dg1_A DRP35, lactonase; beta 99.0 2.3E-07 7.9E-12 96.1 27.5 250 144-429 47-314 (333)
338 1yfq_A Cell cycle arrest prote 99.0 3.6E-07 1.2E-11 94.7 29.1 225 142-414 57-310 (342)
339 2k2q_B Surfactin synthetase th 99.0 5.3E-10 1.8E-14 110.5 7.0 91 486-592 11-108 (242)
340 1p0i_A Cholinesterase; serine 99.0 7.7E-10 2.6E-14 122.0 8.8 127 472-604 93-228 (529)
341 3dw8_B Serine/threonine-protei 99.0 7.4E-08 2.5E-12 104.2 24.4 249 142-429 29-371 (447)
342 1sq9_A Antiviral protein SKI8; 99.0 2.2E-07 7.4E-12 98.7 27.4 247 141-429 16-320 (397)
343 3iz6_a 40S ribosomal protein R 99.0 2.7E-08 9.2E-13 105.5 19.8 244 141-429 66-327 (380)
344 3lcr_A Tautomycetin biosynthet 98.9 9.8E-09 3.3E-13 105.9 15.4 209 485-726 78-304 (319)
345 2hes_X YDR267CP; beta-propelle 98.9 1.6E-07 5.5E-12 97.3 24.7 249 140-429 57-326 (330)
346 4e54_B DNA damage-binding prot 98.9 6.1E-08 2.1E-12 104.8 22.1 245 140-429 163-428 (435)
347 4e54_B DNA damage-binding prot 98.9 3.9E-08 1.3E-12 106.4 20.2 206 144-392 122-334 (435)
348 1tca_A Lipase; hydrolase(carbo 98.9 1.5E-09 5E-14 111.6 8.3 122 468-604 12-136 (317)
349 1gpl_A RP2 lipase; serine este 98.9 2.2E-09 7.7E-14 115.1 10.1 114 485-603 67-181 (432)
350 2bce_A Cholesterol esterase; h 98.9 6.2E-10 2.1E-14 123.3 5.8 132 464-602 75-222 (579)
351 1ea5_A ACHE, acetylcholinester 98.9 1.1E-09 3.6E-14 120.9 7.5 131 466-604 91-230 (537)
352 2pm7_B Protein transport prote 98.9 1E-06 3.5E-11 89.7 29.4 245 141-429 9-283 (297)
353 2xyi_A Probable histone-bindin 98.9 1.5E-07 5E-12 101.6 24.0 246 144-429 131-408 (430)
354 4a11_B DNA excision repair pro 98.9 3.1E-07 1E-11 97.7 26.2 248 140-429 98-363 (408)
355 3mmy_A MRNA export factor; mRN 98.9 2.7E-07 9.3E-12 96.5 25.4 241 140-416 38-335 (368)
356 3k26_A Polycomb protein EED; W 98.9 1.8E-07 6.2E-12 97.8 23.6 239 141-429 18-316 (366)
357 3c75_H MADH, methylamine dehyd 98.9 9.5E-07 3.3E-11 93.7 28.8 281 95-429 79-400 (426)
358 3gre_A Serine/threonine-protei 98.9 1.7E-07 5.7E-12 101.3 23.8 211 141-393 63-300 (437)
359 4aow_A Guanine nucleotide-bind 98.9 1.1E-06 3.6E-11 91.0 28.6 240 139-429 36-284 (340)
360 2xzm_R RACK1; ribosome, transl 98.9 9.9E-07 3.4E-11 91.9 27.8 233 142-429 22-283 (343)
361 3k26_A Polycomb protein EED; W 98.9 9.9E-08 3.4E-12 99.9 20.1 248 142-429 70-364 (366)
362 1dx4_A ACHE, acetylcholinester 98.9 4.8E-09 1.6E-13 116.9 10.3 117 485-603 138-267 (585)
363 3odt_A Protein DOA1; ubiquitin 98.9 1.5E-06 5.2E-11 88.5 28.5 231 142-429 19-253 (313)
364 3sfz_A APAF-1, apoptotic pepti 98.9 5E-08 1.7E-12 120.4 20.4 231 144-429 964-1205(1249)
365 3dm0_A Maltose-binding peripla 98.9 3.1E-07 1E-11 105.8 25.6 238 140-429 381-630 (694)
366 4ggc_A P55CDC, cell division c 98.9 6.3E-06 2.1E-10 84.2 33.0 252 128-429 14-271 (318)
367 3odt_A Protein DOA1; ubiquitin 98.8 6.4E-06 2.2E-10 83.8 32.5 227 143-429 61-294 (313)
368 3dwl_C Actin-related protein 2 98.8 1.1E-07 3.9E-12 100.3 19.0 209 141-384 55-280 (377)
369 3iz6_a 40S ribosomal protein R 98.8 6.1E-07 2.1E-11 95.0 24.4 241 144-429 111-373 (380)
370 3bix_A Neuroligin-1, neuroligi 98.8 3.9E-09 1.3E-13 117.3 7.6 126 471-601 111-247 (574)
371 4aow_A Guanine nucleotide-bind 98.8 1.4E-06 4.9E-11 90.0 26.7 239 141-429 86-335 (340)
372 1jmx_B Amine dehydrogenase; ox 98.8 2.4E-07 8.2E-12 96.3 20.5 159 146-339 4-177 (349)
373 3dr2_A Exported gluconolactona 98.8 1.9E-07 6.5E-12 95.6 19.2 239 144-429 47-304 (305)
374 3jro_A Fusion protein of prote 98.8 1.9E-07 6.6E-12 108.4 20.8 246 140-429 8-283 (753)
375 2oaj_A Protein SNI1; WD40 repe 98.8 1.2E-06 4E-11 103.6 27.4 209 143-390 19-247 (902)
376 3dw8_B Serine/threonine-protei 98.8 7.7E-07 2.6E-11 96.1 23.7 207 143-389 95-377 (447)
377 2hes_X YDR267CP; beta-propelle 98.7 2.4E-06 8.1E-11 88.5 25.6 244 142-429 15-278 (330)
378 1qks_A Cytochrome CD1 nitrite 98.7 8.2E-06 2.8E-10 90.5 30.4 250 144-429 242-536 (567)
379 4a11_B DNA excision repair pro 98.7 2.2E-06 7.5E-11 91.0 25.1 205 142-390 44-281 (408)
380 1bu8_A Protein (pancreatic lip 98.7 2E-08 6.9E-13 108.0 8.8 114 485-603 67-181 (452)
381 3bg1_A Protein SEC13 homolog; 98.7 6.5E-07 2.2E-11 92.1 19.8 243 141-429 13-291 (316)
382 2j04_B YDR362CP, TAU91; beta p 98.7 3.8E-07 1.3E-11 100.6 18.2 246 143-429 135-426 (524)
383 1w52_X Pancreatic lipase relat 98.7 3.5E-08 1.2E-12 106.1 9.0 114 485-603 67-181 (452)
384 1jof_A Carboxy-CIS,CIS-muconat 98.7 1.9E-05 6.6E-10 82.8 30.1 209 190-429 42-289 (365)
385 3v7d_B Cell division control p 98.7 1.2E-05 4E-10 87.3 29.1 234 143-429 205-463 (464)
386 3vu4_A KMHSV2; beta-propeller 98.6 7E-06 2.4E-10 85.8 25.7 233 142-429 20-269 (355)
387 1npe_A Nidogen, entactin; glyc 98.6 3.2E-05 1.1E-09 77.1 29.4 207 143-393 37-246 (267)
388 3v7d_B Cell division control p 98.6 1.3E-05 4.6E-10 86.9 28.6 235 149-429 128-379 (464)
389 2oaj_A Protein SNI1; WD40 repe 98.6 2.1E-06 7.2E-11 101.4 23.7 242 144-429 438-781 (902)
390 3jrp_A Fusion protein of prote 98.6 6.3E-06 2.1E-10 86.4 25.2 209 142-387 56-289 (379)
391 1ys1_X Lipase; CIS peptide Leu 98.6 8E-08 2.7E-12 98.5 9.9 104 486-602 6-113 (320)
392 1ex9_A Lactonizing lipase; alp 98.6 7.6E-08 2.6E-12 97.3 9.6 101 486-602 5-108 (285)
393 1ei9_A Palmitoyl protein thioe 98.6 5.2E-07 1.8E-11 90.7 15.3 104 489-601 6-114 (279)
394 3icv_A Lipase B, CALB; circula 98.6 1E-07 3.5E-12 96.1 9.9 118 472-604 50-170 (316)
395 2xyi_A Probable histone-bindin 98.6 3.1E-06 1.1E-10 91.2 22.2 208 190-429 131-351 (430)
396 3gre_A Serine/threonine-protei 98.6 7.6E-06 2.6E-10 88.1 23.7 209 142-394 112-368 (437)
397 1hpl_A Lipase; hydrolase(carbo 98.6 1E-07 3.5E-12 101.9 8.5 113 485-602 66-179 (449)
398 3n2z_B Lysosomal Pro-X carboxy 98.5 2.5E-07 8.6E-12 98.5 11.4 127 473-601 24-159 (446)
399 2mad_H Methylamine dehydrogena 98.5 3.9E-05 1.3E-09 80.5 27.9 210 145-392 128-357 (373)
400 1mda_H Methylamine dehydrogena 98.5 1.1E-05 3.9E-10 84.0 23.0 240 146-429 69-344 (368)
401 2cb9_A Fengycin synthetase; th 98.5 5.8E-07 2E-11 88.6 12.1 195 486-725 20-226 (244)
402 2ovr_B FBW7, F-BOX/WD repeat p 98.5 7.2E-05 2.5E-09 80.6 29.8 232 144-429 202-440 (445)
403 1rp1_A Pancreatic lipase relat 98.5 1.5E-07 5.1E-12 100.6 8.2 112 485-602 67-179 (450)
404 3lrv_A PRE-mRNA-splicing facto 98.5 1.9E-05 6.5E-10 82.0 24.2 239 147-429 42-290 (343)
405 3dsm_A Uncharacterized protein 98.5 1.3E-05 4.3E-10 82.9 22.3 232 152-429 52-300 (328)
406 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 1.2E-05 4.2E-10 82.0 22.0 247 144-429 20-297 (314)
407 2oiz_A Aromatic amine dehydrog 98.5 2.3E-05 8E-10 82.0 24.4 225 145-409 111-360 (361)
408 3f3f_A Nucleoporin SEH1; struc 98.4 3.8E-05 1.3E-09 79.0 24.7 162 142-337 58-249 (351)
409 4gq1_A NUP37; propeller, trans 98.4 6E-06 2E-10 87.7 18.6 243 146-429 94-387 (393)
410 2w18_A PALB2, fancn, partner a 98.4 2.5E-05 8.7E-10 79.3 21.6 216 143-429 113-355 (356)
411 3g4e_A Regucalcin; six bladed 98.4 3.5E-05 1.2E-09 78.2 23.1 234 96-374 20-264 (297)
412 3sjl_D Methylamine dehydrogena 98.4 1.2E-05 4.1E-10 83.7 19.6 125 147-284 38-169 (386)
413 2x5x_A PHB depolymerase PHAZ7; 98.4 3.9E-07 1.3E-11 93.8 8.0 110 487-603 39-165 (342)
414 3hrp_A Uncharacterized protein 98.4 8.9E-05 3E-09 79.0 26.8 209 142-388 131-357 (409)
415 3lrv_A PRE-mRNA-splicing facto 98.4 4.5E-05 1.5E-09 79.1 23.7 159 143-337 127-292 (343)
416 2pm7_B Protein transport prote 98.4 6.9E-05 2.3E-09 76.0 24.3 207 140-383 52-283 (297)
417 3v65_B Low-density lipoprotein 98.4 0.00029 9.9E-09 74.3 29.9 226 117-393 98-326 (386)
418 3fvz_A Peptidyl-glycine alpha- 98.4 0.00034 1.1E-08 72.0 29.7 245 143-429 25-320 (329)
419 1jmk_C SRFTE, surfactin synthe 98.4 7.6E-07 2.6E-11 86.8 8.5 90 487-602 16-108 (230)
420 1p22_A F-BOX/WD-repeat protein 98.3 0.00035 1.2E-08 74.9 30.1 226 147-429 137-363 (435)
421 3v64_C Agrin; beta propeller, 98.3 0.00081 2.8E-08 69.7 30.8 225 117-392 55-282 (349)
422 2dst_A Hypothetical protein TT 98.3 3.2E-06 1.1E-10 74.2 10.3 83 488-592 22-104 (131)
423 3jro_A Fusion protein of prote 98.3 1.8E-05 6.3E-10 91.7 19.6 246 96-387 17-287 (753)
424 3c75_H MADH, methylamine dehyd 98.3 5.6E-05 1.9E-09 80.1 21.0 246 150-429 81-357 (426)
425 3dsm_A Uncharacterized protein 98.3 0.00027 9.1E-09 72.8 25.8 224 157-429 4-251 (328)
426 2zyr_A Lipase, putative; fatty 98.3 5.7E-07 1.9E-11 95.6 5.3 113 486-604 20-167 (484)
427 1rwi_B Serine/threonine-protei 98.3 0.00033 1.1E-08 69.4 25.5 235 143-429 25-262 (270)
428 2oit_A Nucleoporin 214KDA; NH2 98.2 3.3E-05 1.1E-09 83.1 19.0 117 143-284 94-223 (434)
429 2hfk_A Pikromycin, type I poly 98.2 1.2E-06 4.3E-11 90.1 7.4 207 490-726 91-313 (319)
430 3e5z_A Putative gluconolactona 98.2 0.00026 8.8E-09 71.5 24.4 245 94-388 33-289 (296)
431 1npe_A Nidogen, entactin; glyc 98.2 0.0015 5E-08 64.8 29.2 227 153-429 1-236 (267)
432 3tej_A Enterobactin synthase c 98.2 5.3E-06 1.8E-10 85.8 11.4 102 486-603 99-204 (329)
433 2j04_B YDR362CP, TAU91; beta p 98.2 4.5E-05 1.5E-09 83.9 19.1 220 144-411 210-458 (524)
434 3mmy_A MRNA export factor; mRN 98.2 0.00047 1.6E-08 71.4 26.2 115 190-339 42-162 (368)
435 2ovr_B FBW7, F-BOX/WD repeat p 98.2 0.0052 1.8E-07 65.8 34.6 226 142-429 160-389 (445)
436 1p22_A F-BOX/WD-repeat protein 98.2 0.002 6.9E-08 68.9 31.0 227 143-429 175-412 (435)
437 3vu4_A KMHSV2; beta-propeller 98.2 0.00059 2E-08 71.0 25.9 203 144-387 61-273 (355)
438 2iwa_A Glutamine cyclotransfer 98.1 0.00043 1.5E-08 68.1 22.8 196 191-429 24-235 (266)
439 3sov_A LRP-6, low-density lipo 98.1 0.0041 1.4E-07 63.4 31.0 218 168-429 13-236 (318)
440 1ijq_A LDL receptor, low-densi 98.1 0.0045 1.5E-07 63.1 31.2 226 117-392 12-245 (316)
441 4gq1_A NUP37; propeller, trans 98.1 5.4E-05 1.9E-09 80.2 16.5 212 139-383 134-387 (393)
442 2p4o_A Hypothetical protein; p 98.1 0.0032 1.1E-07 63.8 29.0 236 144-417 34-278 (306)
443 1ijq_A LDL receptor, low-densi 98.1 0.0037 1.3E-07 63.7 29.3 217 169-429 11-236 (316)
444 3sov_A LRP-6, low-density lipo 98.1 0.004 1.4E-07 63.5 29.2 206 144-393 37-246 (318)
445 3v64_C Agrin; beta propeller, 98.1 0.0038 1.3E-07 64.6 29.3 215 169-429 54-273 (349)
446 3v65_B Low-density lipoprotein 98.0 0.0024 8.1E-08 67.2 28.1 215 169-429 97-316 (386)
447 3p5b_L Low density lipoprotein 98.0 0.0091 3.1E-07 63.0 32.1 228 116-393 93-328 (400)
448 3no2_A Uncharacterized protein 98.0 0.00097 3.3E-08 66.6 23.0 219 166-429 13-251 (276)
449 2hih_A Lipase 46 kDa form; A1 98.0 1.8E-05 6.1E-10 83.8 10.4 107 486-601 50-210 (431)
450 2iwa_A Glutamine cyclotransfer 98.0 0.0014 4.8E-08 64.3 23.2 195 144-384 23-236 (266)
451 3bg1_A Protein SEC13 homolog; 98.0 7.1E-05 2.4E-09 76.6 14.6 209 141-387 57-296 (316)
452 2ghs_A AGR_C_1268P; regucalcin 98.0 0.0021 7.3E-08 65.8 25.7 187 117-336 111-315 (326)
453 3tjm_A Fatty acid synthase; th 98.0 3.4E-05 1.2E-09 77.7 11.7 95 486-601 22-122 (283)
454 1q7f_A NHL, brain tumor CG1071 98.0 0.0032 1.1E-07 62.9 25.9 238 142-429 30-278 (286)
455 3nol_A Glutamine cyclotransfer 97.9 0.0015 5.1E-08 63.5 21.6 194 191-429 46-254 (262)
456 1fwx_A Nitrous oxide reductase 97.9 0.00043 1.5E-08 75.2 19.5 217 98-337 99-361 (595)
457 2dsn_A Thermostable lipase; T1 97.9 4.4E-05 1.5E-09 79.6 11.3 88 487-587 5-123 (387)
458 3dr2_A Exported gluconolactona 97.9 0.00049 1.7E-08 69.9 19.1 157 146-335 135-304 (305)
459 2dg1_A DRP35, lactonase; beta 97.9 0.0027 9.3E-08 65.0 24.5 190 115-338 112-317 (333)
460 2ece_A 462AA long hypothetical 97.9 0.02 6.8E-07 60.1 30.4 232 166-429 41-350 (462)
461 3m0c_C LDL receptor, low-densi 97.8 0.014 4.8E-07 66.9 31.4 206 144-392 426-639 (791)
462 3hrp_A Uncharacterized protein 97.8 0.0026 9E-08 67.5 23.7 155 147-339 176-356 (409)
463 2ece_A 462AA long hypothetical 97.8 0.0089 3.1E-07 62.7 26.5 238 149-415 89-399 (462)
464 1fwx_A Nitrous oxide reductase 97.8 0.0021 7.1E-08 70.0 22.3 246 147-414 90-405 (595)
465 3p5b_L Low density lipoprotein 97.8 0.012 4.2E-07 62.0 28.2 219 168-429 92-318 (400)
466 4a0p_A LRP6, LRP-6, low-densit 97.8 0.023 7.8E-07 63.6 31.5 225 117-392 17-244 (628)
467 2qe8_A Uncharacterized protein 97.8 0.002 6.8E-08 66.6 21.2 249 144-417 19-310 (343)
468 1whs_A Serine carboxypeptidase 97.8 0.00016 5.4E-09 70.1 11.6 145 459-607 21-190 (255)
469 2fp8_A Strictosidine synthase; 97.8 0.0032 1.1E-07 64.4 22.4 240 145-429 22-311 (322)
470 4ebb_A Dipeptidyl peptidase 2; 97.7 0.00012 3.9E-09 79.1 11.5 113 485-601 40-161 (472)
471 3qqz_A Putative uncharacterize 97.7 0.0078 2.7E-07 58.7 22.9 203 143-383 28-251 (255)
472 1rwi_B Serine/threonine-protei 97.7 0.0019 6.6E-08 63.7 18.9 193 144-384 69-263 (270)
473 2z2n_A Virginiamycin B lyase; 97.7 0.015 5E-07 58.1 25.7 231 143-429 16-253 (299)
474 3m0c_C LDL receptor, low-densi 97.6 0.026 8.9E-07 64.7 28.8 186 169-392 405-595 (791)
475 1ivy_A Human protective protei 97.6 0.00014 4.6E-09 77.6 9.0 141 457-605 19-183 (452)
476 3nok_A Glutaminyl cyclase; bet 97.6 0.0066 2.3E-07 58.9 19.9 191 191-429 58-264 (268)
477 2w18_A PALB2, fancn, partner a 97.6 0.0073 2.5E-07 61.3 21.0 181 168-383 157-355 (356)
478 3tc9_A Hypothetical hydrolase; 97.6 0.013 4.6E-07 62.4 24.5 159 144-337 139-301 (430)
479 2oit_A Nucleoporin 214KDA; NH2 97.6 0.0015 5.2E-08 70.0 17.0 119 142-284 150-278 (434)
480 3nol_A Glutamine cyclotransfer 97.6 0.022 7.4E-07 55.3 23.2 192 144-383 45-254 (262)
481 2qc5_A Streptogramin B lactona 97.5 0.037 1.3E-06 55.0 26.5 233 144-429 22-258 (300)
482 3mbr_X Glutamine cyclotransfer 97.5 0.016 5.4E-07 55.7 21.9 196 191-429 24-233 (243)
483 3qqz_A Putative uncharacterize 97.5 0.0069 2.3E-07 59.1 19.4 203 190-429 29-251 (255)
484 3mbr_X Glutamine cyclotransfer 97.4 0.099 3.4E-06 50.2 25.6 197 144-383 23-233 (243)
485 3no2_A Uncharacterized protein 97.4 0.0084 2.9E-07 59.7 18.7 213 144-401 39-270 (276)
486 2z2n_A Virginiamycin B lyase; 97.4 0.14 4.9E-06 50.6 29.7 229 143-429 58-293 (299)
487 4hw6_A Hypothetical protein, I 97.3 0.042 1.4E-06 58.5 24.7 158 144-336 141-303 (433)
488 1mda_H Methylamine dehydrogena 97.3 0.00088 3E-08 69.6 11.2 126 258-395 219-356 (368)
489 1q7f_A NHL, brain tumor CG1071 97.3 0.089 3E-06 52.1 25.5 196 143-384 78-279 (286)
490 1n7d_A LDL receptor, low-densi 97.3 0.00096 3.3E-08 76.0 11.6 207 144-394 408-623 (699)
491 4a0p_A LRP6, LRP-6, low-densit 97.2 0.15 5.1E-06 57.0 28.4 224 154-429 7-235 (628)
492 3fvz_A Peptidyl-glycine alpha- 97.2 0.12 4.2E-06 52.5 25.8 200 143-383 92-320 (329)
493 2qc5_A Streptogramin B lactona 97.2 0.21 7.2E-06 49.4 29.3 229 143-429 63-298 (300)
494 3tc9_A Hypothetical hydrolase; 97.1 0.2 6.9E-06 53.1 26.7 152 100-284 149-301 (430)
495 2vpj_A Kelch-like protein 12; 97.0 0.097 3.3E-06 52.4 22.3 238 167-445 30-285 (301)
496 3nok_A Glutaminyl cyclase; bet 97.0 0.14 4.7E-06 49.7 21.4 191 145-383 58-264 (268)
497 3s94_A LRP-6, low-density lipo 96.9 0.13 4.3E-06 57.5 24.0 218 168-429 18-241 (619)
498 1n7d_A LDL receptor, low-densi 96.9 0.0042 1.4E-07 70.7 11.6 217 169-429 387-612 (699)
499 2qe8_A Uncharacterized protein 96.8 0.03 1E-06 57.5 17.2 146 115-284 93-278 (343)
500 3kya_A Putative phosphatase; s 96.8 0.32 1.1E-05 52.1 24.7 246 145-429 142-473 (496)
No 1
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=2.2e-99 Score=876.23 Aligned_cols=682 Identities=40% Similarity=0.713 Sum_probs=591.5
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEe
Q psy4818 20 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQ 99 (734)
Q Consensus 20 ~~~~P~~~~~~~~~~~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 99 (734)
++.||+|+|+|++ +++||+++.|||+||||.++|++++||++||+||+++|++++++++|++||+++++.+++++|.++
T Consensus 9 ~~~~p~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 87 (693)
T 3iuj_A 9 RLHYPVTRQGEQV-DHYFGQAVADPYRWLEDDRSPETEAWVKAQNAVTQDYLAQIPYRAAIKEKLAASWNYAKEGAPFRE 87 (693)
T ss_dssp -CCCCCCCCCCCE-EEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEECCCEEE
T ss_pred CCCCCCCCCCCeE-EEeCCccccCCchhhcCCCCHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHhhccccCCCCEEE
Confidence 4679999999965 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
|+++||+++.++++++.+||++ .++++++|||+|++++++++.+.+++|||||++|||+.+.+|+++.+|+++|+++|+
T Consensus 88 g~~~y~~~~~~~~~~~~~~r~~-~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~ 166 (693)
T 3iuj_A 88 GRYHYFFKNDGLQNQNVLWRQQ-EGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ 166 (693)
T ss_dssp TTEEEEEEECSSCSSCEEEEEC-TTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS
T ss_pred CCEEEEEEEcCCCceeEEEEeC-CCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC
Confidence 9999999999999999999976 467789999999999998889999999999999999999999999999999999999
Q ss_pred cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCC-CCeeEEEEEEe
Q psy4818 180 DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN-GRSLGLHSEVT 258 (734)
Q Consensus 180 ~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~-~~~~~~~~~~S 258 (734)
.+.++..++++.+++|| ||++|+|++.+.. +.+..++.+++.+||+|++++++.++++++++++ ++.++.++.||
T Consensus 167 ~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~---~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 167 PLETPLKDVKFSGISWL-GNEGFFYSSYDKP---DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp EEEEEEEEEESCCCEEE-TTTEEEEEESSCC---C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred CCccccCCceeccEEEe-CCCEEEEEEecCc---ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 87777666655789999 9999999997642 1122344567889999999999888899999876 56677889999
Q ss_pred cCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCC
Q psy4818 259 DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP 338 (734)
Q Consensus 259 pDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 338 (734)
|||++|++........++||++|++++ ...+..+.........+|+++|++|||++++++++++|++++++++
T Consensus 243 pDg~~l~~~~~~~~~~~~i~~~d~~~~-------~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 243 EDDRFLLISAANSTSGNRLYVKDLSQE-------NAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp TTSCEEEEEEESSSSCCEEEEEETTST-------TCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCCCEEEEEEccCCCCcEEEEEECCCC-------CCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 999999998876555579999999873 1245666665555556699999999999999888999999999887
Q ss_pred CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEec
Q psy4818 339 CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss 417 (734)
...+|+.++++.+ .++ .+.. ++++|++...+++.++|+++++. |+..+.+..+ .+.+..++.+++++.+++.+++
T Consensus 316 ~~~~~~~l~~~~~-~~~-~~s~-~g~~lv~~~~~~g~~~l~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 316 GPAHWRDLIPERQ-QVL-TVHS-GSGYLFAEYMVDATARVEQFDYE-GKRVREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp CGGGCEEEECCCS-SCE-EEEE-ETTEEEEEEEETTEEEEEEECTT-SCEEEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred CccccEEEecCCC-CEE-EEEE-ECCEEEEEEEECCeeEEEEEECC-CCeeEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 6556888998874 445 5544 45899999999999999999995 6556778776 5677788888999999999999
Q ss_pred CCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCC
Q psy4818 418 FLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG 497 (734)
Q Consensus 418 ~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg 497 (734)
+++|+++|.+|+ +++ +.++++.... .+++..+.++++++++.||.+|++++++|++...+++.|+||++|||
T Consensus 392 ~~tP~~l~~~d~-----~~g--~~~~l~~~~~-~~~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg 463 (693)
T 3iuj_A 392 YAQPPTLYRFEP-----KSG--AISLYRASAA-PFKPEDYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGG 463 (693)
T ss_dssp SSSCCEEEEECT-----TTC--CEEEEECCCS-SCCGGGEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCC
T ss_pred CCCCCEEEEEEC-----CCC--eEEEEEeCCC-CcChhhCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCC
Confidence 999999999999 566 5677776554 47777889999999999999999999999987667889999999999
Q ss_pred CCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcCh
Q psy4818 498 YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSN 577 (734)
Q Consensus 498 ~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~ 577 (734)
++....+.|......+++ +||+|+++|+||+|++|..|+.++...++.+.++|+++++++|++++++|++||+|+|+|+
T Consensus 464 ~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~ 542 (693)
T 3iuj_A 464 FDVSLTPSFSVSVANWLD-LGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSN 542 (693)
T ss_dssp TTCCCCCCCCHHHHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETH
T ss_pred CCcCCCCccCHHHHHHHH-CCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECH
Confidence 999999999987655555 6999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHH-HHHHHhCCccCCCCCCCCCccCCcEEE
Q psy4818 578 GGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTH-FHNLLSYSPLHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 578 GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~sp~~~~~~p~~~~~~P~~Li 656 (734)
||++++++++++|++|+++|+.+|++|+..+..++.+..|..+||+|.+++. ++.+.++||+++++.. +++||+||
T Consensus 543 GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~---~~~Pp~Li 619 (693)
T 3iuj_A 543 GGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPG---VSYPSTMV 619 (693)
T ss_dssp HHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTT---CCCCEEEE
T ss_pred HHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhccc---CCCCceeE
Confidence 9999999999999999999999999999988877777778889999987777 8889999999999862 78999999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCCCCCC
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYYPDMP 734 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~~ 734 (734)
+||++|.+|+++++.+++++|++. +.+|+++++++++++||++..+..++++.++.+++||.++|+....|..|
T Consensus 620 ~~G~~D~~v~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~p 693 (693)
T 3iuj_A 620 TTADHDDRVVPAHSFKFAATLQAD----NAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYRELPRQP 693 (693)
T ss_dssp EEESSCSSSCTHHHHHHHHHHHHH----CCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTCSSCSSCC
T ss_pred EecCCCCCCChhHHHHHHHHHHhh----CCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999998 44468999999999999998765556889999999999999998777765
No 2
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=6.3e-96 Score=852.18 Aligned_cols=699 Identities=46% Similarity=0.872 Sum_probs=603.8
Q ss_pred CCCCCCccCC-ceeccccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEe
Q psy4818 21 GPYPKVRKDE-TVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQ 99 (734)
Q Consensus 21 ~~~P~~~~~~-~~~~~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 99 (734)
+.||+|+|+| ++ +++||+++.|||+||||.+++++++||++||++++++|++++++++|+++++.++..++.+.|+++
T Consensus 4 ~~~p~~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~d 82 (710)
T 2xdw_A 4 FQYPDVYRDETAI-QDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKK 82 (710)
T ss_dssp SCCCCCCCCTTCE-EEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHCSCEECCCEEE
T ss_pred CCCCCCCCCCCee-eeeCCcEEccCChhhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEE
Confidence 5799999999 65 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
|+++||+++++++++..||+++..++++++|+|++++++++...+.+++|||||++|||+++.+|+++++|+++|+++|+
T Consensus 83 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~ 162 (710)
T 2xdw_A 83 GKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK 162 (710)
T ss_dssp TTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE
T ss_pred CCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC
Confidence 99999999998888889999987788899999999999888888999999999999999999999999999999999999
Q ss_pred cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec
Q psy4818 180 DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD 259 (734)
Q Consensus 180 ~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp 259 (734)
.+..+..+..+.+++|||||+.|+|++.+......++..++..++.+||+|++++++.+++++++.++++.+..++.|||
T Consensus 163 ~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp 242 (710)
T 2xdw_A 163 ELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD 242 (710)
T ss_dssp EEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT
T ss_pred CCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC
Confidence 87666665556789999999999999876432111233444567789999999998877788888766566778899999
Q ss_pred CCcEEEEEEecCCC-CceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCC
Q psy4818 260 CGRYLLVSTSNNTQ-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP 338 (734)
Q Consensus 260 DG~~l~~~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 338 (734)
||++|++...+... .++||++|+++.. ..+.....+..+..........|++||++|||.++.++++++|++++++++
T Consensus 243 Dg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 243 DGRYVLLSIREGCDPVNRLWYCDLQQES-NGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp TSCEEEEEEECSSSSCCEEEEEEGGGSS-SSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCCEEEEEEEccCCCccEEEEEECcccc-cccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 99999998876544 4899999997510 000001134556555555555699999999999998888899999999876
Q ss_pred CCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecC
Q psy4818 339 CEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 418 (734)
Q Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~ 418 (734)
....|+.++++.+...+..+.+.+++++++.+..++..+|+++++.+|+.++.|+.+.+.+..++++++++.++++++|+
T Consensus 322 ~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~ 401 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSF 401 (710)
T ss_dssp CGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECS
T ss_pred CcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCC
Confidence 54457889988755577777777568999999999999999999977887788888777888888889999999999999
Q ss_pred CCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCC
Q psy4818 419 LQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY 498 (734)
Q Consensus 419 ~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~ 498 (734)
++|+++|.+|+ ++++.+.++++...++.+++..+.++++++++.||.+|++++++|+++..+++.|+||++|||+
T Consensus 402 ~~P~~i~~~d~-----~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~ 476 (710)
T 2xdw_A 402 LSPGIIYHCDL-----TKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGF 476 (710)
T ss_dssp SCCCEEEEEET-----TSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCT
T ss_pred CCCCEEEEEEC-----CCCccceEEeeecccCCcCccccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCC
Confidence 99999999999 5662116777776666678888899999999999999999999999876678899999999999
Q ss_pred CCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChH
Q psy4818 499 GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNG 578 (734)
Q Consensus 499 ~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~G 578 (734)
+....+.|+..+..+++++||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++||+|+|+|+|
T Consensus 477 ~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~G 556 (710)
T 2xdw_A 477 NISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNG 556 (710)
T ss_dssp TCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHH
T ss_pred CCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHH
Confidence 99888889887766666269999999999999999999999888888899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCC-----CCCCCccCCc
Q psy4818 579 GLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIK-----VPPNNTQYPA 653 (734)
Q Consensus 579 G~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~-----~p~~~~~~P~ 653 (734)
|++++++++++|++|+++|+.+|++|+..+...+.+..|..+||+|.+++.++.+.++||++++. . +++||
T Consensus 557 G~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~----~~~pP 632 (710)
T 2xdw_A 557 GLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADD----IQYPS 632 (710)
T ss_dssp HHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTT----CCCCE
T ss_pred HHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhccccccc----CCCCc
Confidence 99999999999999999999999999998877776677888899998888888999999999998 5 78877
Q ss_pred EEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 654 TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 654 ~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
+||+||++|.+|+++++.+++++|++...++..+|+++++++++++||++..+..++.+..+.+++||.++|+..+.
T Consensus 633 ~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 709 (710)
T 2xdw_A 633 MLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWI 709 (710)
T ss_dssp EEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred EEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCccC
Confidence 99999999999999999999999998633333447899999999999999877655678899999999999988753
No 3
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=4.2e-94 Score=834.33 Aligned_cols=678 Identities=36% Similarity=0.646 Sum_probs=587.0
Q ss_pred CCCCCccCCceeccccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcEEeCC
Q psy4818 22 PYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQEN 101 (734)
Q Consensus 22 ~~P~~~~~~~~~~~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~ 101 (734)
.||+|+|+|++ +++||+++.|||+||||.++|++++||++||+|++++|++++++++|++||+++++.++.+.|+++|+
T Consensus 2 ~~p~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~dG~ 80 (695)
T 2bkl_A 2 SYPATRAEQVV-DTLHGVQVADPYRWLEDEKAPEVQTWMTAQNAHAREALAKFPGREALAARFKELFYTDSVSTPSRRNG 80 (695)
T ss_dssp CCSCCCCCCCE-EEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHSCCEECCCEEETT
T ss_pred CCCCCCCCCee-eeeCCcEEecCChHhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEECC
Confidence 58999999965 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc
Q psy4818 102 NYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY 181 (734)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~ 181 (734)
++||+++++++++..||+++..++++++|+|++++++++...+.+++|||||++|||+.+.+|+++.+|+++|+++|+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 81 RFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp EEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred EEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 99999999888889999999878889999999999988888999999999999999999999999999999999999977
Q ss_pred -cccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC
Q psy4818 182 -PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 260 (734)
Q Consensus 182 -~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 260 (734)
.....+..+..++|||||+.|+|++.+.. ..+..++..++.+||+|++++++.+++++++.+++..++.++.||||
T Consensus 161 ~~~~~~~~~~~~~~wspDg~~l~~~~~d~~---~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 161 KVDVIEGGKYATPKWTPDSKGFYYEWLPTD---PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp SSCCBSCCTTCCCEECTTSSEEEEEECCCC---TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT
T ss_pred CCcccCcccccceEEecCCCEEEEEEecCC---CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC
Confidence 54555554578999999999999987542 11233445677899999999988777889988766667788999999
Q ss_pred CcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC
Q psy4818 261 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE 340 (734)
Q Consensus 261 G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 340 (734)
|++|++........++||+++..+ ..++.+.........++.++|+ +||.++.++.+++|++++++++..
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~---------~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~ 307 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGE---------KDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPAR 307 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTC---------SSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSG
T ss_pred CCEEEEEEeCCCCceEEEEEcCCC---------CceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCc
Confidence 999999887643447999997755 2345566555545555558999 999999877789999999987654
Q ss_pred CCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCC
Q psy4818 341 KNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFL 419 (734)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~ 419 (734)
.+|+.++++.+...+.++.+. ++++++....++..+|+++++ +|+.++.+..+ .+.+..++++++++.+++.++|++
T Consensus 308 ~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 308 ASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL-KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp GGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET-TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred cCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 457889987755667777776 489999999999999999998 57666778776 677778888899999999999999
Q ss_pred CCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCC
Q psy4818 420 QPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYG 499 (734)
Q Consensus 420 ~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~ 499 (734)
+|+++|.+|+ +++ +.++++..... +++..+.++++++++.||.+|++++++|++++.+++.|+||++|||++
T Consensus 386 ~P~~v~~~d~-----~~g--~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~ 457 (695)
T 2bkl_A 386 TPRQIYKTSV-----STG--KSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFN 457 (695)
T ss_dssp EEEEEEEEET-----TTC--CEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTT
T ss_pred CCCEEEEEEC-----CCC--cEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCc
Confidence 9999999999 567 56777765544 777778999999999999999999999998766788999999999999
Q ss_pred CcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHH
Q psy4818 500 VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG 579 (734)
Q Consensus 500 ~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG 579 (734)
....+.|......++. +||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++||+|+|+|+||
T Consensus 458 ~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG 536 (695)
T 2bkl_A 458 VNMEANFRSSILPWLD-AGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGG 536 (695)
T ss_dssp CCCCCCCCGGGHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHH
T ss_pred cccCCCcCHHHHHHHh-CCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHH
Confidence 9888888876655554 699999999999999999999998888888999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEec
Q psy4818 580 LLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTG 659 (734)
Q Consensus 580 ~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g 659 (734)
++++++++++|++|+++|+.+|++|+..+.....+..|..+||+|.+++.++.+.++||+++++.. ..+||+||+||
T Consensus 537 ~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~---~~~~P~Li~~G 613 (695)
T 2bkl_A 537 LLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPD---VRYPALLMMAA 613 (695)
T ss_dssp HHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSS---CCCCEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhc---CCCCCEEEEee
Confidence 999999999999999999999999999877666666777889999888889999999999999862 34577999999
Q ss_pred CCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCCC
Q psy4818 660 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYYP 731 (734)
Q Consensus 660 ~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 731 (734)
++|.+|+++++.+++++|++. ...|+++++++++++||++..+..+..+..+.+++||.++|+..+.+
T Consensus 614 ~~D~~v~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 681 (695)
T 2bkl_A 614 DHDDRVDPMHARKFVAAVQNS----PGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQGAQ 681 (695)
T ss_dssp TTCSSSCTHHHHHHHHHHHTS----TTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC----
T ss_pred CCCCCCChHHHHHHHHHHHhh----ccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999983 11278999999999999997765556788899999999999877554
No 4
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=6.7e-92 Score=821.38 Aligned_cols=679 Identities=36% Similarity=0.639 Sum_probs=572.8
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCC--CChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCCccCCcE
Q psy4818 20 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYP--HCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYEKYSAPQ 97 (734)
Q Consensus 20 ~~~~P~~~~~~~~~~~~hg~~~~D~y~wled~--~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~ 97 (734)
.+.||+|+|+|++ +++||+++.|||+||||. +++++++||++||+|++++|++++++++|+++|+.++..++.+.|+
T Consensus 37 ~~~~p~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~aen~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~ 115 (741)
T 1yr2_A 37 LPPYPASPQVPLV-EDHFGEKVSDPWRWLEADVRTDAKVAAWVQAQSAYTAAYLKQLPERAALEKRMKALIDYERFGLPQ 115 (741)
T ss_dssp -CCCCCCCCCCCE-EEETTEEEECTTGGGGSCTTTCHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEECCCE
T ss_pred cCCCCCCCCCCee-eeeCCcEEccCcHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHhhcccccCCCE
Confidence 3678999999965 999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCC---CCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEE
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQRNL---TGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 174 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~~~~---~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~d 174 (734)
++|+++||.++++++++..||+++.. ++++++|+|+|++++++...+.+++|||||++|||+++.+|+++.+|+++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 99999999999988888999999876 788999999999998877889999999999999999999999999999999
Q ss_pred CCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEE
Q psy4818 175 VDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 254 (734)
Q Consensus 175 l~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~ 254 (734)
+++|+.+.....+..+.+++|||| ++|+|++.+... ..+..++.+++.+||+|++++++.+++++++.++++.++.+
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~--~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPK--EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC----------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcc--cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999998776555555578999999 999999865421 01122334567899999999988778889988766656788
Q ss_pred EEEecCCcEEEEEEecCC-CCceEEEEeCCCCCCCcccCCCC-ceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEE
Q psy4818 255 SEVTDCGRYLLVSTSNNT-QGSDLHYFDLHSLPDGKISGKFP-LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 332 (734)
Q Consensus 255 ~~~SpDG~~l~~~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~-~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 332 (734)
+.|||||++|++...+.. ..++||++|++++. .. +..+..........+++||++|+|.++.++.+++|++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~-------~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK-------IGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTE-------ECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCC-------CcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 999999999999887643 24799999998721 12 4556555545555578999999999998888899999
Q ss_pred EecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceE
Q psy4818 333 INLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEV 411 (734)
Q Consensus 333 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l 411 (734)
++++++. .+|+.++++. ...+.++.+.+ +++++....++..+|+++++ +|+..+.++.+ .+.+..++++++++.+
T Consensus 346 ~d~~~~~-~~~~~l~~~~-~~~l~~~~~~~-~~lv~~~~~dg~~~l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 346 VDLSGST-PRFDTVVPES-KDNLESVGIAG-NRLFASYIHDAKSQVLAFDL-DGKPAGAVSLPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp EECSSSS-CEEEEEECCC-SSEEEEEEEEB-TEEEEEEEETTEEEEEEEET-TSCEEEECBCSSSCEEEEEECCBTCSCE
T ss_pred EeCCCCc-cccEEEecCC-CCeEEEEEEEC-CEEEEEEEECCEEEEEEEeC-CCCceeeccCCCCeEEEEeecCCCCCEE
Confidence 9998753 3478888876 44566666665 89999999999999999998 57666778776 6778788889999999
Q ss_pred EEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEE
Q psy4818 412 FYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVI 491 (734)
Q Consensus 412 ~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~v 491 (734)
++.++|+++|+++|.+|+ +++ +.++++... ..+++..+..+++++++.||.+|++++++|++. +++.|+|
T Consensus 422 ~~~~ss~~~P~~i~~~d~-----~tg--~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~v 491 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDP-----ATA--KTTPWEPVH-LTFDPADFRVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTL 491 (741)
T ss_dssp EEEEEETTEEEEEEEEET-----TTT--EEEECSCCC-CSSCGGGEEEEEEEEECTTSCEEEEEEEEETTC--CSCCCEE
T ss_pred EEEEcCCCCCCEEEEEEC-----CCC--cEEEEecCC-CCCChhHCEEEEEEEEcCCCCEEEEEEEecCCC--CCCCcEE
Confidence 999999999999999999 566 566666533 247777889999999999999999999999875 5789999
Q ss_pred EEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEE
Q psy4818 492 IYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYIT 571 (734)
Q Consensus 492 v~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~ 571 (734)
|++|||++....+.|+.....+ +++||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++||+
T Consensus 492 l~~hGg~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~ 570 (741)
T 1yr2_A 492 LYGYGGFNVALTPWFSAGFMTW-IDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLA 570 (741)
T ss_dssp EECCCCTTCCCCCCCCHHHHHH-HTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEE
T ss_pred EEECCCCCccCCCCcCHHHHHH-HHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEE
Confidence 9999999988888888776544 457999999999999999999999988888889999999999999999999999999
Q ss_pred EEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccC
Q psy4818 572 IMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQY 651 (734)
Q Consensus 572 i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~ 651 (734)
|+|+|+||++++++++++|++|+++|+.+|++|+..+.....+..|..+||+|.+++.++.+.++||+++++.. +++
T Consensus 571 i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~---~~~ 647 (741)
T 1yr2_A 571 IEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSG---VDY 647 (741)
T ss_dssp EEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTT---SCC
T ss_pred EEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhcc---CCC
Confidence 99999999999999999999999999999999999877766666777889999888889999999999999852 777
Q ss_pred CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCCC
Q psy4818 652 PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYYP 731 (734)
Q Consensus 652 P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 731 (734)
||+||+||++|.+|+++++.+++++|++. +..|+++++++++++||++..+..++++..+.+++||.++|+..+.+
T Consensus 648 ~P~Li~~G~~D~~v~~~~~~~~~~~l~~~----~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 723 (741)
T 1yr2_A 648 PAILVTTADTDDRVVPGHSFKYTAALQTA----AIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTGLTPRP 723 (741)
T ss_dssp CEEEEEECSCCSSSCTHHHHHHHHHHHHS----CCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCEEEEeeCCCCCCChhHHHHHHHHHhhh----hcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 77999999999999999999999999983 22289999999999999998766556788999999999999877544
No 5
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=1.6e-91 Score=814.47 Aligned_cols=665 Identities=23% Similarity=0.339 Sum_probs=560.5
Q ss_pred CCCCCCccCCceeccccC---------------ceecCCCcccCCCC--ChhHHHHHHHhhhhhHHhhcCC-chHHHHHH
Q psy4818 21 GPYPKVRKDETVEDDYHG---------------MKIKDPYRWLEYPH--CAETQIFNFMQNNISNPYCQNH-TDREAIKE 82 (734)
Q Consensus 21 ~~~P~~~~~~~~~~~~hg---------------~~~~D~y~wled~~--~~~~~~~~~~q~~~~~~~l~~~-~~~~~l~~ 82 (734)
+.||+|+|+|++ ++ || +++.|||+||||.+ |||+++||++||+|++++|+++ +++++|++
T Consensus 31 ~~~p~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~d~y~wl~d~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~l~~ 108 (751)
T 2xe4_A 31 AQPPIAAKKPHR-VT-LGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDPAVIEHLNKEKVYFQARSADIAQLRDDIYA 108 (751)
T ss_dssp CCCCCCCCCCCE-EE-ESCCTTSCCCSSCCSSCEEEECTTGGGCCTTSCCHHHHHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred CCCCCCCCCCee-ec-CCCcccccccccccCCCeEEeeCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 679999999976 88 99 99999999999998 9999999999999999999999 99999999
Q ss_pred HHHHhccCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeC---CCC--CeEEEeCCCCcCCCC-cEEEeeEEeC-CCCcE
Q psy4818 83 QLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRN---LTG--STEVFLDPNKLSKDG-TTALKLYAFS-DNGKH 155 (734)
Q Consensus 83 ~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~---~~g--~~~~l~d~~~~~~~~-~~~~~~~~~S-PDG~~ 155 (734)
||++++..++.+.|.++|+++||+++.++++++++||++. .++ .+++|+|+|++++++ ++.++.++|| |||++
T Consensus 109 e~~~~~~~~~~~~p~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~ 188 (751)
T 2xe4_A 109 EHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDL 188 (751)
T ss_dssp HHHHTSCSSEECCCEEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCE
T ss_pred HHHHhcccccCCCCeEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCE
Confidence 9999999999999999999999999999898999999986 455 689999999999884 4589999999 99999
Q ss_pred EEEEEeCCCCceEEEEEEECCCC-CcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC
Q psy4818 156 FAYCLSKSGSDWNTLHIKDVDTG-KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT 234 (734)
Q Consensus 156 la~~~~~~g~~~~~l~v~dl~~g-~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t 234 (734)
|||+.+.+|+++++||++|+++| +.+...+.+. +.+++|||||++|+|++.+. ..++.+||++++++
T Consensus 189 lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~-~~~~~WspDg~~l~y~~~d~-----------~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 189 VAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT-NGEIVWGPDHTSLFYVTKDE-----------TLRENKVWRHVMGK 256 (751)
T ss_dssp EEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE-CSCCEECSSTTEEEEEEECT-----------TCCEEEEEEEETTS
T ss_pred EEEEEeCCCCceEEEEEEECCCCCEeCCccccCc-eeeEEEecCCCEEEEEEECC-----------CCCCCEEEEEECCC
Confidence 99999999999999999999999 7655444444 47899999999999998753 24456899999999
Q ss_pred CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc--eeeeccccceEEEEEe
Q psy4818 235 EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL--KTVIPGMDHHHEIIAN 312 (734)
Q Consensus 235 ~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~l~~~~~~~~~~~s~ 312 (734)
++.++++++++++.. +..++.|||||++|++...+. ..++||++|++++. ..+ +.++...... .|++
T Consensus 257 ~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~d~~~~~-------~~~~~~~l~~~~~~~--~~s~ 325 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSP-ETAEVHLLDLRKGN-------AHNTLEIVRPREKGV--RYDV 325 (751)
T ss_dssp CGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECS-SCEEEEEEESSSCT-------TCCCEEESSCCCTTC--CEEE
T ss_pred CchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCC-CCceEEEEECCCCC-------CCceeEEeecCCCCc--eEEE
Confidence 877778888876544 777899999999999988654 35899999998731 122 3343322211 1444
Q ss_pred c---CCeEEEEeCCC-CCCceEEEEecCCCCCCCceE-eecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC----
Q psy4818 313 N---GPELIVKTTKN-APKGKVVTINLNNPCEKNWKT-LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL---- 383 (734)
Q Consensus 313 d---g~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl---- 383 (734)
+ |+.|||+++++ +.+++|++++++++ .+|+. ++++.....+..+.+.+ +++++....++..+|+++++
T Consensus 326 ~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~--~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 326 QMHGTSHLVILTNEGGAVNHKLLIAPRGQP--SDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMADSQD 402 (751)
T ss_dssp EEETTTEEEEEECTTTCTTCEEEEEETTST--TCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEECCTTT
T ss_pred eeeeCCEEEEEeCCCCCCCcEEEEEcCCCc--ccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEeccccc
Confidence 4 99999999987 67889999998753 23777 88877555667776664 89999999999999999996
Q ss_pred ---CCCceeeeeCCC-CceEEeecc----CcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCC-CCCC
Q psy4818 384 ---NTGKRLHSFPLD-LGQITHISG----RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVP-EFEP 454 (734)
Q Consensus 384 ---~~g~~~~~l~~~-~g~v~~~~~----~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~ 454 (734)
.+|+..+.|+++ .+.+.+++. +.+++.+++.++++++|+.+|.+|+ .++ +.++++....+ .+++
T Consensus 403 ~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~-----~~~--~~~~l~~~~~~~~~~~ 475 (751)
T 2xe4_A 403 GVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSP-----QDH--SRTAVKVREVGGGFDA 475 (751)
T ss_dssp SCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECT-----TTC--CEEEEEECCCCTTCCG
T ss_pred ccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEEC-----CCC--cEEEEeccccccCCCc
Confidence 455514667665 333335543 4577889999999999999999999 566 56777766554 5777
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+.++++++++.||.+|++++++|++.+++++.|+||++|||++....+.|+..... |+++||+|+++|+||+|++|.
T Consensus 476 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~-l~~~G~~v~~~d~RG~g~~G~ 554 (751)
T 2xe4_A 476 ANYKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLP-YCDRGMIFAIAHIRGGSELGR 554 (751)
T ss_dssp GGEEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHH-HHTTTCEEEEECCTTSCTTCT
T ss_pred cceEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHH-HHhCCcEEEEEeeCCCCCcCc
Confidence 7889999999999999999999999987667889999999999998888888876554 455799999999999999999
Q ss_pred hhhh-ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-c
Q psy4818 535 DWHN-AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-T 612 (734)
Q Consensus 535 ~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~ 612 (734)
.|+. .+...++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|++|+..++.. .
T Consensus 555 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~ 634 (751)
T 2xe4_A 555 AWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPS 634 (751)
T ss_dssp HHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTT
T ss_pred chhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccC
Confidence 9999 8888888899999999999999999999999999999999999999999999999999999999998775321 1
Q ss_pred cC---cccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC
Q psy4818 613 IA---YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 613 ~~---~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~ 689 (734)
.. ..| .+||+|.+++.++.+.++||+.+++. +++||+||+||++|.+||++++.+++++|++. ...+.
T Consensus 635 ~~~~~~~~-~~~g~p~~~~~~~~~~~~sp~~~~~~----~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~----~~~~~ 705 (751)
T 2xe4_A 635 IPLTTGEW-EEWGNPNEYKYYDYMLSYSPMDNVRA----QEYPNIMVQCGLHDPRVAYWEPAKWVSKLREC----KTDNN 705 (751)
T ss_dssp STTHHHHT-TTTCCTTSHHHHHHHHHHCTGGGCCS----SCCCEEEEEEETTCSSSCTHHHHHHHHHHHHH----CCSCC
T ss_pred cccchhhH-HHcCCCCCHHHHHHHHhcChhhhhcc----CCCCceeEEeeCCCCCCCHHHHHHHHHHHHhc----CCCCc
Confidence 11 123 56788877888888999999999987 89988999999999999999999999999998 33356
Q ss_pred cEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 690 PLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 690 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
++.+++++++||++.......++..+.+++||.++|+..+.
T Consensus 706 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~~ 746 (751)
T 2xe4_A 706 EILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKSTVR 746 (751)
T ss_dssp CEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred eEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCch
Confidence 78888899999999876655678888999999999987654
No 6
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=4.7e-87 Score=757.06 Aligned_cols=658 Identities=22% Similarity=0.356 Sum_probs=556.6
Q ss_pred cccCceecCCCcccCCCCChhHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHhccCC-ccCCcEEeCCeEEEEEEcCCCC
Q psy4818 35 DYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHTDREAIKEQLLRMANYE-KYSAPQRQENNYFYFHNKGLQN 113 (734)
Q Consensus 35 ~~hg~~~~D~y~wled~~~~~~~~~~~~q~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~~~p~~~g~~~~~~~~~~~~~ 113 (734)
.-||+++.|||+||||.+++++++||++||++|.++|+.+|.+++|++|++++++.+ +++.|...|+++|+.++++.++
T Consensus 14 ~~~~~~~~Dpy~wLEd~~~~~~~~wv~aqN~~T~~~l~~~p~~~~l~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d~~~~ 93 (711)
T 4hvt_A 14 NNKQIFNPKETKFLEEAEGVEALEWAKERTSKTEKALQAMQEYKQIKKEIETIFYDQRKTPYGVIRKGYVYNFWMDDKNP 93 (711)
T ss_dssp ------CHHHHGGGGSSSSSHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHTCTTSCCCCEEETTEEEEEECCSSCS
T ss_pred CCCceeeCCCchhhcCCCCHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHhccccccCCcEEECCEEEEEEecCCCC
Confidence 458999999999999999999999999999999999999999999999999999887 8999999999999999999888
Q ss_pred eeEEEEEeCC------CCCeEEEeCCCCcCCC-Cc-EEEeeEE-eCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc
Q psy4818 114 HSILYVQRNL------TGSTEVFLDPNKLSKD-GT-TALKLYA-FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV 184 (734)
Q Consensus 114 ~~~l~~~~~~------~g~~~~l~d~~~~~~~-~~-~~~~~~~-~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~ 184 (734)
| .|||+... +++|++|||+|+|+++ ++ +.+.+.+ +||||+++||+.+.+|+++..|+++|++|++.+.+.
T Consensus 94 ~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~ 172 (711)
T 4hvt_A 94 Q-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNG 172 (711)
T ss_dssp S-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTC
T ss_pred c-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCC
Confidence 7 89998543 6789999999999977 65 8899988 999999999999999999999999999999987765
Q ss_pred cc-c--------cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEE
Q psy4818 185 LK-N--------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS 255 (734)
Q Consensus 185 ~~-~--------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 255 (734)
+. . ++++.++|. |+++++|.+...+ +..++++++.+||+|++||++.++++||+++++. +..++
T Consensus 173 ~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~-~~~~~ 245 (711)
T 4hvt_A 173 FEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHK-----NEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEY-IYVSA 245 (711)
T ss_dssp SCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCST-----TCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTS-CEEEE
T ss_pred cccccccccccccccceeeEE-CCCEEEEEeCCCC-----CCcCcCCCCCEEEEEECCCChHHCeEEeccCCCc-eEEEE
Confidence 44 2 234667997 7788998765332 3466778899999999999999999999987765 56778
Q ss_pred EEecCCcE----EEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCC-------
Q psy4818 256 EVTDCGRY----LLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN------- 324 (734)
Q Consensus 256 ~~SpDG~~----l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~------- 324 (734)
..++|+++ +++........+++|+.+++. +. .++.++....+.. .....++++|+.+..+
T Consensus 246 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~------~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 316 (711)
T 4hvt_A 246 GKLLSDTISSSLIFISANKDFYNYDNYILDTKY-KN------LKLQKINMPSDAT--LQGSFKEYVFWLLRSDWKFKSHN 316 (711)
T ss_dssp EESSCTTTCSSEEEEEEESSSSCEEEEEEECSS-SS------CEEEECCSCTTCE--EEEEETTEEEEECSSCEEETTEE
T ss_pred EEecCCCceEEEEEEEEecccCceeEEEEcCCC-CC------CcceEeecCCcce--EeeeECCEEEEEECccccccccc
Confidence 88999985 555544334448999999875 21 2334443333322 2233466788866432
Q ss_pred CCCceEEEEecCCCC-----CCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCc-eeee-eCCC-C
Q psy4818 325 APKGKVVTINLNNPC-----EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-RLHS-FPLD-L 396 (734)
Q Consensus 325 ~~~~~l~~~d~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~-~~~~-l~~~-~ 396 (734)
.++++|++++++++. ..+|+.++++.....++++.+.+ +++++....++.++|+++++.+|+ ..+. +.++ .
T Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~ 395 (711)
T 4hvt_A 317 IKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK-DRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ 395 (711)
T ss_dssp ECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS-SCEEEEEEETTEEEEEEECEETTEECCCEEECCCST
T ss_pred CCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC-CEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC
Confidence 368899999998742 34688877777678888888887 789999999999999999987775 2355 6666 5
Q ss_pred ceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEE
Q psy4818 397 GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYI 476 (734)
Q Consensus 397 g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~ 476 (734)
+.+..++.+++++.+++.++|+++|+.+|.+|+ . + +.++++... +.+++..+.++++++++.||.+|++++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~-----~-~--~~~~l~~~~-~~~~~~~~~~e~v~~~s~DG~~i~~~l 466 (711)
T 4hvt_A 396 NAIFGMSSYEEEEEALITIENSIVPPTIYLWVK-----T-H--ELKIIRKAL-YSFDSENYVLEQKEATSFDGVKIPYFL 466 (711)
T ss_dssp TCEEEEECCTTCSCEEEEEECSSSCCEEEEECT-----T-S--CEEEEECCS-SCCCGGGEEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC-----C-C--cEEEEecCC-cccCcccCeeEEEEEECCCCeEEEEEE
Confidence 677667777888899999999999999999998 5 5 566676643 357777889999999999999999999
Q ss_pred EEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHH
Q psy4818 477 IHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAA 556 (734)
Q Consensus 477 ~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~ 556 (734)
++|++.+++++.|+||++|||++.+..+.|+..+.+.|+++||+|+++|+||+|++|..|+..+...++.+.++|+++++
T Consensus 467 ~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav 546 (711)
T 4hvt_A 467 VYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVS 546 (711)
T ss_dssp EEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHH
T ss_pred EecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHH
Confidence 99998767789999999999999999999988765456667999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhC
Q psy4818 557 EYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY 636 (734)
Q Consensus 557 ~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 636 (734)
++|++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..+.....+..|..+||+|.+++.++.+.++
T Consensus 547 ~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~ 626 (711)
T 4hvt_A 547 EELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKY 626 (711)
T ss_dssp HHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHH
T ss_pred HHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999887766666788899999888888999999
Q ss_pred CccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHH-HhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHH
Q psy4818 637 SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL-QEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMT 715 (734)
Q Consensus 637 sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 715 (734)
||+++++.. ..+||+||+||++|.+||++++.+++++| ++. |+++++++++++||++.....++++..+
T Consensus 627 SP~~~v~~i---~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~-------g~pv~l~~~p~~gHg~~~~~~~~~~~~~ 696 (711)
T 4hvt_A 627 APLENLSLT---QKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNP-------NTKTYFLESKDSGHGSGSDLKESANYFI 696 (711)
T ss_dssp CGGGSCCTT---SCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCT-------TCCEEEEEESSCCSSSCSSHHHHHHHHH
T ss_pred CHHHHHhhc---CCCCCEEEEecCCCCcCChHHHHHHHHHHHHHc-------CCCEEEEEECCCCCcCcCCcchHHHHHH
Confidence 999999872 34578999999999999999999999999 998 8999999999999999877776788889
Q ss_pred HHHHHHHHHcCCCC
Q psy4818 716 DIYVFLMKSLGLKY 729 (734)
Q Consensus 716 ~~~~fl~~~l~~~~ 729 (734)
.+++||.++|+...
T Consensus 697 ~i~~FL~~~Lg~~i 710 (711)
T 4hvt_A 697 NLYTFFANALKLKI 710 (711)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCCcc
Confidence 99999999998763
No 7
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=5.7e-54 Score=496.16 Aligned_cols=588 Identities=14% Similarity=0.119 Sum_probs=426.3
Q ss_pred ccCCcEEeCCeEEEEEEc-CCCCeeEEEEEeCCCCCeEEEeCCCCc--CCCCcEEEeeEEeC--CCCcE-EEEEEeCCCC
Q psy4818 92 KYSAPQRQENNYFYFHNK-GLQNHSILYVQRNLTGSTEVFLDPNKL--SKDGTTALKLYAFS--DNGKH-FAYCLSKSGS 165 (734)
Q Consensus 92 ~~~~p~~~g~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~l~d~~~~--~~~~~~~~~~~~~S--PDG~~-la~~~~~~g~ 165 (734)
....|..+|+++||.+.+ ..+....||++. .++..+.|+..... +..+.+.-..+.|| |||++ |||+.+..
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~-- 101 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD-- 101 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT--
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCC--
Confidence 466677889999999874 334567888873 35565655543211 11111111244454 99999 99987642
Q ss_pred ceEEEEEEECC--C-CCcccccc-----cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC-
Q psy4818 166 DWNTLHIKDVD--T-GKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ- 236 (734)
Q Consensus 166 ~~~~l~v~dl~--~-g~~~~~~~-----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~- 236 (734)
.+||++++. + ++..+.+. .......++|||||+.|+|++.+.... .......+||++++.+..
T Consensus 102 --~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~------~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 102 --QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE------GPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp --CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS------STTCEEEEEEEEETTSTTT
T ss_pred --CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC------CCCCceeEEEEEECCCCcc
Confidence 569999998 5 66443333 233446899999999999998753100 001233589999998721
Q ss_pred ---CCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC----CCceEEEEeCC-CCCCCcccCCCCceeeeccc-cceE
Q psy4818 237 ---DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT----QGSDLHYFDLH-SLPDGKISGKFPLKTVIPGM-DHHH 307 (734)
Q Consensus 237 ---~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~----~~~~i~~~d~~-~~~~~~l~~~~~~~~l~~~~-~~~~ 307 (734)
.+...+.. .+..+...++|||||++|++...... ...+||++|++ ++.. .....+..+. ....
T Consensus 174 ~~~~~~~~l~~--~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~------~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 174 ADRSAVRELSD--DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF------ADTRTLLGGPEEAIA 245 (662)
T ss_dssp TCGGGSEESSC--SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE------EEEEEEEEETTBCEE
T ss_pred ccCCceeEEEe--cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc------cccEEeCCCCCceEc
Confidence 11222220 22336677999999999999876542 22689999998 4210 0233444332 2233
Q ss_pred E-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCce-------eEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 308 E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT-------LDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 308 ~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
. .|+|||+ ++|.++.++ ..+|+++++++++ ++.++....... +..+.+.+++++++.... +..+|+
T Consensus 246 ~~~~spdg~-l~~~~~~~~-~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 246 QAEWAPDGS-LIVATDRTG-WWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp EEEECTTSC-EEEEECTTS-SCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred ceEECCCCe-EEEEECCCC-CeEEEEEECCCCc---eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 3 3999999 888888754 5579999987665 566665431110 223444445788888888 888999
Q ss_pred EEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCc-e
Q psy4818 380 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF-Q 458 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 458 (734)
++|+.+|+ ++.|+.+.+.+..+. +++++.+++..++...|..+|.+|+ +++ +.+.++....+.+++..+ .
T Consensus 320 ~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~-----~~g--~~~~l~~~~~~~~~~~~~~~ 390 (662)
T 3azo_A 320 ILDPESGE-LVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDT-----VTG--RARTIGARHTDPVDPAYYPE 390 (662)
T ss_dssp EEETTTTE-EEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEET-----TTC--CEEEEESCCCCSSCGGGSCC
T ss_pred EEECCCCc-EEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEEC-----CCC--ceEEeecCCcccCCccccCc
Confidence 99996565 577876666665542 5677889999999999999999999 566 566665544344555555 5
Q ss_pred EEEEEEEcCCCcEEeEEEEEecccc----CCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGAL----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~----~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
.+.+.+++.||.+|+++++.|++.+ ++++.|+||++||+++....+.|... .+.|+++||+|+++|+||++++|.
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~~~~G~ 469 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLD-VAYFTSRGIGVADVNYGGSTGYGR 469 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHH-HHHHHTTTCEEEEEECTTCSSSCH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHH-HHHHHhCCCEEEEECCCCCCCccH
Confidence 7889999989999999999998754 45789999999999887776677754 456677899999999999999999
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-cc-
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-FT- 612 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-~~- 612 (734)
.|.......++...++|+.+++++|++++.+|++||+|+|+|+||+++++++.+ |++|+++|+.+|+.|+..+.. ..
T Consensus 470 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ 548 (662)
T 3azo_A 470 AYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTH 548 (662)
T ss_dssp HHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSC
T ss_pred HHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhccccc
Confidence 999876666677789999999999999999999999999999999999999886 999999999999998875433 11
Q ss_pred -cCccccc-ccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc
Q psy4818 613 -IAYYSES-EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 690 (734)
Q Consensus 613 -~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~ 690 (734)
....+.. .+|.+. +..+.+..++|+.++.. +++| +||+||++|.+||+.++.+++++|++. |++
T Consensus 549 ~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------g~~ 614 (662)
T 3azo_A 549 DFESRYLDFLIGSFE--EFPERYRDRAPLTRADR----VRVP-FLLLQGLEDPVCPPEQCDRFLEAVAGC-------GVP 614 (662)
T ss_dssp GGGTTHHHHHTCCTT--TCHHHHHHTCGGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHHTTS-------CCC
T ss_pred chhhHhHHHHhCCCc--cchhHHHhhChHhHhcc----CCCC-EEEEeeCCCCCCCHHHHHHHHHHHHHc-------CCC
Confidence 1111111 234432 33456778899998876 7777 999999999999999999999999988 899
Q ss_pred EEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 691 LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 691 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
+++++++++||++..... ..+....+++||.++|+....
T Consensus 615 ~~~~~~~~~gH~~~~~~~-~~~~~~~~~~fl~~~l~~~~~ 653 (662)
T 3azo_A 615 HAYLSFEGEGHGFRRKET-MVRALEAELSLYAQVFGVEVA 653 (662)
T ss_dssp EEEEEETTCCSSCCSHHH-HHHHHHHHHHHHHHHTTCCCC
T ss_pred EEEEEECCCCCCCCChHH-HHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999876544 468888999999999987643
No 8
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=1.9e-54 Score=505.30 Aligned_cols=589 Identities=12% Similarity=0.074 Sum_probs=420.5
Q ss_pred CcEEeCCeEEEEEEcCC----CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEE
Q psy4818 95 APQRQENNYFYFHNKGL----QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTL 170 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l 170 (734)
.++|||.+++|..+... .....+|+.+..++..+.|.... ..+..++|||||++|||+.+ .+|
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~-------~~~~~~~~SPdG~~la~~~~------~~i 134 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP-------NNTQWVTWSPVGHKLAYVWN------NDI 134 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-------TTEEEEEECSSTTCEEEEET------TEE
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC-------CcceeeEECCCCCEEEEEEC------CeE
Confidence 34789999999887431 11256777777666544332211 12678999999999999964 369
Q ss_pred EEEECCCCCccccccccc-------------------ccCeeEEEcCCcEEEEEEEecCCCCC-------CC---Cc---
Q psy4818 171 HIKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGTA-------DG---TE--- 218 (734)
Q Consensus 171 ~v~dl~~g~~~~~~~~~~-------------------~~~~~~wSpDg~~l~y~~~~~~~~~~-------~~---~~--- 218 (734)
|++|+.+|+..+.+..+. ...++.|||||+.|+|.+.++..... .. ..
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~ 214 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTV 214 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEE
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcce
Confidence 999999988654433221 11248899999999999876532110 00 00
Q ss_pred -----c--cccCCcEEEEEECCC---CCCCCeeEEecC----CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 219 -----T--TAHMGQKIYYHVLGT---EQDKDIPVVEFP----NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 219 -----~--~~~~~~~l~~~~l~t---~~~~~~~v~~~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
. ..+...+|+++++.+ +..........+ .+..++..++|||||+.+++...+......|+++|+++
T Consensus 215 ~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 215 RVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp EEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred eecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 0 011123789999987 532111112211 14557788999999998888877765557899999988
Q ss_pred CCCC--cccCCCCceeeecc-cc-------ceEEEEEecCCeEE-EEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 285 LPDG--KISGKFPLKTVIPG-MD-------HHHEIIANNGPELI-VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 285 ~~~~--~l~~~~~~~~l~~~-~~-------~~~~~~s~dg~~l~-~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
|... +. ....++.. .. .....|+|||+.|+ +.+++++ ...||+++++++. .+.|+.+. ..
T Consensus 295 g~~~~~~~----~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-~~~l~~~~~~~~~---~~~lT~g~-~~ 365 (740)
T 4a5s_A 295 SSGRWNCL----VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKKD---CTFITKGT-WE 365 (740)
T ss_dssp TTTEEEEC----GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCSS---CEESCCSS-SC
T ss_pred Ccccccee----EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC-ceEEEEEECCCCc---eEecccCC-EE
Confidence 5300 00 01111100 00 11234999999988 7777655 5579999998876 46666553 45
Q ss_pred eeEEEEEeeCCEEEEEEEe----CCceeEEEEECCCCceeeeeCCC----CceEEeeccCcccceEEEEEecCCCCceEE
Q psy4818 354 TLDVVAAVANNKLIVHYIQ----NVRSVMDLHDLNTGKRLHSFPLD----LGQITHISGRRKYNEVFYGFTSFLQPGTIY 425 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~----~~~~~l~~~dl~~g~~~~~l~~~----~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~ 425 (734)
+..... .+++.|+|.... .+..+||.+++.+++..+.|+.. .+.+..++++++++.+++.++++. |+.++
T Consensus 366 v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~ 443 (740)
T 4a5s_A 366 VIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYT 443 (740)
T ss_dssp EEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEE
T ss_pred EEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEE
Confidence 544333 446889998876 34568999999544433366632 245667889999999999999987 88999
Q ss_pred EEeCCCCcCCCCCCceeEEeecc-C-CCCCCCCc-eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC
Q psy4818 426 HCNIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV 502 (734)
Q Consensus 426 ~~d~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~ 502 (734)
++++ .+++ ...++.... + +.+....+ ..+.+.+ +.||.+|+++++.|+++++.+++|+||++|||++...
T Consensus 444 l~~~-----~~~~-~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~ 516 (740)
T 4a5s_A 444 LHSS-----VNDK-GLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQK 516 (740)
T ss_dssp EEET-----TTTE-EEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCC
T ss_pred EEEC-----CCCc-EEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccc
Confidence 9998 4442 223333211 1 11233334 4566777 7799999999999999877789999999999987753
Q ss_pred -CccccHHHHHHHH-hcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHH
Q psy4818 503 -LPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGL 580 (734)
Q Consensus 503 -~~~~~~~~~~~l~-~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~ 580 (734)
...|...+...|+ ++||+|+++|+||+|++|..|.......++...++|+.+++++|++++++|++||+|+|+|+||+
T Consensus 517 ~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~ 596 (740)
T 4a5s_A 517 ADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGY 596 (740)
T ss_dssp CCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred cccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHH
Confidence 3344433444444 57999999999999999999999888778888899999999999988899999999999999999
Q ss_pred HHHHHHhcCCCceeEEEEcCCcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEec
Q psy4818 581 LVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTG 659 (734)
Q Consensus 581 ~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g 659 (734)
++++++.++|++|+++|+.+|+.|+..+.. .+...| |.|...+..+.+...+|+.++.. ++.||+||+||
T Consensus 597 ~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----i~~~P~Lii~G 667 (740)
T 4a5s_A 597 VTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-----VYTERYMGLPTPEDNLDHYRNSTVMSRAEN----FKQVEYLLIHG 667 (740)
T ss_dssp HHHHHHTTTCSCCSEEEEESCCCCGGGSBH-----HHHHHHHCCSSTTTTHHHHHHSCSGGGGGG----GGGSEEEEEEE
T ss_pred HHHHHHHhCCCceeEEEEcCCccchHHhhh-----HHHHHHcCCCCccccHHHHHhCCHHHHHhc----CCCCcEEEEEc
Confidence 999999999999999999999999875432 122333 66533344556778899988876 77755999999
Q ss_pred CCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCCC
Q psy4818 660 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYYP 731 (734)
Q Consensus 660 ~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 731 (734)
++|.+||+.++.+++++|+++ +++++++++|+++|++..... ..+.+..+.+||.++|+....|
T Consensus 668 ~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~~~~~ 731 (740)
T 4a5s_A 668 TADDNVHFQQSAQISKALVDV-------GVDFQAMWYTDEDHGIASSTA-HQHIYTHMSHFIKQCFSLPAAA 731 (740)
T ss_dssp TTCSSSCTHHHHHHHHHHHHT-------TCCCEEEEETTCCTTCCSHHH-HHHHHHHHHHHHHHHTTCC---
T ss_pred CCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCcCCCCcc-HHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999998 899999999999999865444 3678888999999999876544
No 9
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-50 Score=468.12 Aligned_cols=585 Identities=12% Similarity=0.078 Sum_probs=404.9
Q ss_pred cCCcEEeCCeEEEEEEcCC----CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceE
Q psy4818 93 YSAPQRQENNYFYFHNKGL----QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 168 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~ 168 (734)
...++|||.+++|.....+ .....||+.+..++.. +....+. ..+..++|||||++|||+.+ .
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~~~l~----~~~~~~~~SPDG~~la~~~~------~ 130 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRGNELP----RPIQYLCWSPVGSKLAYVYQ------N 130 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCC----SSBCCEEECSSTTCEEEEET------T
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccceecC----cccccceECCCCCEEEEEEC------C
Confidence 4456689999999876431 1124678777655543 1111111 12567999999999999863 2
Q ss_pred EEEEEECCCCCccccccccc-------------------ccCeeEEEcCCcEEEEEEEecCCCC--------CCCCc---
Q psy4818 169 TLHIKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGT--------ADGTE--- 218 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~-------------------~~~~~~wSpDg~~l~y~~~~~~~~~--------~~~~~--- 218 (734)
+|+++|+.+|+..+.+..+. ....++|||||+.|+|.+.++.... .+...
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 79999999988654332211 1147999999999999987642100 00000
Q ss_pred -------ccccCCcEEEEEECCCCCCC-CeeEEe---cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEe----CC
Q psy4818 219 -------TTAHMGQKIYYHVLGTEQDK-DIPVVE---FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD----LH 283 (734)
Q Consensus 219 -------~~~~~~~~l~~~~l~t~~~~-~~~v~~---~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d----~~ 283 (734)
-..+...+|+++++.++... .+.+.. ...+......++|||||+.++....+.....+|+++| +.
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 00112237888888775421 001100 0123446778999999876554444433346899999 77
Q ss_pred CCCCCcccCCCCceeeecccc--ce-----EEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeE
Q psy4818 284 SLPDGKISGKFPLKTVIPGMD--HH-----HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLD 356 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~--~~-----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 356 (734)
++....+.. ....... .. ...|+|||+.|++.+.......+|++++++++. .+.++.+. ..+..
T Consensus 291 ~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~---~~~lt~~~-~~v~~ 361 (719)
T 1z68_A 291 TWDCPKTQE-----HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN---AIQITSGK-WEAIN 361 (719)
T ss_dssp SEECCGGGE-----EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---CEECSCSS-SCEEE
T ss_pred CCceEEEEe-----cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---eEecccCc-eEEEE
Confidence 643222210 0001111 11 234999999998865443446789999998765 45555443 44434
Q ss_pred EEEEeeCCEEEEEEEe----CCceeEEEEECCCCc-eeeeeCC----CCceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 357 VVAAVANNKLIVHYIQ----NVRSVMDLHDLNTGK-RLHSFPL----DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 357 ~~~~~~~~~l~~~~~~----~~~~~l~~~dl~~g~-~~~~l~~----~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
...+ +++.+++.... .+..+|+.+++.+|. ..+.++. ..+.+..++++++++.+++.+++++.| .++++
T Consensus 362 ~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~ 439 (719)
T 1z68_A 362 IFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLH 439 (719)
T ss_dssp EEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEE
T ss_pred EEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEE
Confidence 3445 66788888866 455688888885553 2345542 223455677889999999999999888 58899
Q ss_pred eCCCCcCCCCCCceeEEeecc-C-CCCCCCCc-eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-C
Q psy4818 428 NIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-L 503 (734)
Q Consensus 428 d~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~ 503 (734)
|+ ++++ ...++.... + ..++...+ .++.+++++.| .+|+++++.|+++++.++.|+||++||+++... .
T Consensus 440 d~-----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~ 512 (719)
T 1z68_A 440 DG-----RTDQ-EIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVR 512 (719)
T ss_dssp CS-----SSCC-EEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCC
T ss_pred EC-----CCCC-EEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCccc
Confidence 98 5662 133343311 1 12344445 67889999888 899999999998766778999999999987653 3
Q ss_pred ccccHHHHH-HHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHH
Q psy4818 504 PTFSISRCM-FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 582 (734)
Q Consensus 504 ~~~~~~~~~-~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 582 (734)
..|...+.. +++++||+|+++|+||+|++|..|.......++...++|+.+++++|++++.+|++|++|+|+|+||+++
T Consensus 513 ~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 592 (719)
T 1z68_A 513 SVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVS 592 (719)
T ss_dssp CCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHH
T ss_pred ccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHH
Confidence 344433334 4446799999999999999999998877766777789999999999999888999999999999999999
Q ss_pred HHHHhcCCCceeEEEEcCCcchhccccccccCcccccc-cCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCC
Q psy4818 583 GACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH 661 (734)
Q Consensus 583 ~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~ 661 (734)
+.++.++|++|+++|+.+|+.++..+.. .+... +|.|...+....+...+|+.++.. ++.||+||+||++
T Consensus 593 ~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~P~li~~G~~ 663 (719)
T 1z68_A 593 SLALASGTGLFKCGIAVAPVSSWEYYAS-----VYTERFMGLPTKDDNLEHYKNSTVMARAEY----FRNVDYLLIHGTA 663 (719)
T ss_dssp HHHHTTSSSCCSEEEEESCCCCTTTSBH-----HHHHHHHCCSSTTTTHHHHHHTCSGGGGGG----GTTSEEEEEEETT
T ss_pred HHHHHhCCCceEEEEEcCCccChHHhcc-----ccchhhcCCcccccchhhhhhCCHhHHHhc----CCCCcEEEEEeCC
Confidence 9999999999999999999998765421 12122 365543333455677888888876 7785699999999
Q ss_pred CCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 662 DDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 662 D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
|.+||+.++.+++++|++. ++++++++++++||++. ... ..+....+.+||.++|+
T Consensus 664 D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~gH~~~-~~~-~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 664 DDNVHFQNSAQIAKALVNA-------QVDFQAMWYSDQNHGLS-GLS-TNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CSSSCTHHHHHHHHHHHHT-------TCCCEEEEETTCCTTCC-THH-HHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHC-------CCceEEEEECcCCCCCC-ccc-HHHHHHHHHHHHHHhhC
Confidence 9999999999999999998 88999999999999993 332 36778889999999875
No 10
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=3.1e-50 Score=457.40 Aligned_cols=553 Identities=15% Similarity=0.121 Sum_probs=400.8
Q ss_pred HHHHHHHHHhccCCc-cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEE
Q psy4818 78 EAIKEQLLRMANYEK-YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHF 156 (734)
Q Consensus 78 ~~l~~~~~~~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~l 156 (734)
.++.+.+..+....- ....++||.+++|.....+ ...||..+ ++..+.++... ...+..+.|||| ++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~g--~~~lw~~~--~g~~~~lt~~~------~~~~~~~~~spd--~~ 77 (582)
T 3o4h_A 10 SRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEG--SVNAYLYD--GGETVKLNREP------INSVLDPHYGVG--RV 77 (582)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEETT--EEEEEEEE--TTEEEECCSSC------CSEECEECTTCS--EE
T ss_pred HHHHHHHHHHhccchheeecCCCCCeEEEEEccCC--ceeEEEEc--CCCcEeeeccc------ccccccccCCCC--eE
Confidence 334445555444332 2334699999999987543 36688863 45555554422 135778999999 68
Q ss_pred EEEEeC-CCCceEEEEEEEC--CCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC
Q psy4818 157 AYCLSK-SGSDWNTLHIKDV--DTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG 233 (734)
Q Consensus 157 a~~~~~-~g~~~~~l~v~dl--~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 233 (734)
+|+.+. +|.+...||++++ .++.. ..+.... ....+|||||+.++|++.... .+.++++.
T Consensus 78 l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~-~~~~~~s~dg~~~~~~s~~~~---------------~~~l~d~~ 140 (582)
T 3o4h_A 78 ILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKP-MRILSGVDTGEAVVFTGATED---------------RVALYALD 140 (582)
T ss_dssp EEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCS-BEEEEEEECSSCEEEEEECSS---------------CEEEEEEE
T ss_pred EEEeccCCCCcceEEEEEeccCCCccc-cccCCCC-ceeeeeCCCCCeEEEEecCCC---------------CceEEEcc
Confidence 888875 5666788999998 55543 2222211 236799999999999875321 23356777
Q ss_pred CCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEe
Q psy4818 234 TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIAN 312 (734)
Q Consensus 234 t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~ 312 (734)
++.. ..+...+. .++.|||||++|++...+......||++|++++. .+.++........ .|||
T Consensus 141 ~g~~--~~l~~~~~-----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---------~~~l~~~~~~~~~~~~Sp 204 (582)
T 3o4h_A 141 GGGL--RELARLPG-----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---------LRVFDSGEGSFSSASISP 204 (582)
T ss_dssp TTEE--EEEEEESS-----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---------CEEECCSSCEEEEEEECT
T ss_pred CCcE--EEeecCCC-----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---------ceEeecCCCccccceECC
Confidence 6532 23333322 4689999999999887654444679999998842 3444443333333 3999
Q ss_pred cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeE-------EEEEeeCCEEEEEEEeCCceeEEEEECCC
Q psy4818 313 NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLD-------VVAAVANNKLIVHYIQNVRSVMDLHDLNT 385 (734)
Q Consensus 313 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~l~~~dl~~ 385 (734)
||+.|+ .++.++ ..+|+++|++++. .+ ++......+.. ...+..++.++++...++ .+.+|++
T Consensus 205 DG~~l~-~~~~~~-~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g--~~~l~~~-- 274 (582)
T 3o4h_A 205 GMKVTA-GLETAR-EARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG--RSAVFID-- 274 (582)
T ss_dssp TSCEEE-EEECSS-CEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT--EEEEEET--
T ss_pred CCCEEE-EccCCC-eeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC--cEEEEEE--
Confidence 999988 444433 4579999998876 34 44443222211 111444458888888886 4556666
Q ss_pred CceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCC---CCc-eEEE
Q psy4818 386 GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEP---TLF-QTKQ 461 (734)
Q Consensus 386 g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~ 461 (734)
|+.++ .+.+.+.+++++ ++ .++++.++..+|+++|.+|+ .+ +.+.+ .+++ ..+ ..+.
T Consensus 275 g~~~~---~~~~~v~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~-----~~---~~~~l------~~~~~~~~~~~~~~~ 335 (582)
T 3o4h_A 275 GERVE---APQGNHGRVVLW-RG-KLVTSHTSLSTPPRIVSLPS-----GE---PLLEG------GLPEDLRRSIAGSRL 335 (582)
T ss_dssp TEEEC---CCSSEEEEEEEE-TT-EEEEEEEETTEEEEEEEETT-----CC---EEECC------CCCHHHHHTEEEEEE
T ss_pred CCeec---cCCCceEEEEec-CC-EEEEEEcCCCCCCeEEEEcC-----CC---ceEEE------ecCCccccccCcceE
Confidence 76543 234567677777 55 56688899999999999998 22 22222 2232 233 7889
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
+.+++.+|.+|+++++.|++.. ++.|+||++||+++......|... .+.|+++||+|+++|+||++++|..|.....
T Consensus 336 ~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~ 412 (582)
T 3o4h_A 336 VWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTF-AASLAAAGFHVVMPNYRGSTGYGEEWRLKII 412 (582)
T ss_dssp EEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHH-HHHHHHTTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred EEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHH-HHHHHhCCCEEEEeccCCCCCCchhHHhhhh
Confidence 9999999999999999998753 378999999999887666677654 4566678999999999999999999999877
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcc--ccc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY--SES 619 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~--~~~ 619 (734)
..++...++|+.+++++|++++.+| |++|+|+|+||++++.++.++|++|+++|+.+|+.++..+........ |..
T Consensus 413 ~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 490 (582)
T 3o4h_A 413 GDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIE 490 (582)
T ss_dssp TCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHH
Confidence 7778888999999999999998888 999999999999999999999999999999999999876543221111 221
Q ss_pred c-cCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy4818 620 E-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 698 (734)
Q Consensus 620 ~-~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 698 (734)
. +| +..+.+..++|+.++.. ++.| +||+||++|.+||+.++.+++++|++. |++++++++++
T Consensus 491 ~~~~-----~~~~~~~~~sp~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~-------g~~~~~~~~~~ 553 (582)
T 3o4h_A 491 QLTG-----GSREIMRSRSPINHVDR----IKEP-LALIHPQNASRTPLKPLLRLMGELLAR-------GKTFEAHIIPD 553 (582)
T ss_dssp HHTT-----TCHHHHHHTCGGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEETT
T ss_pred HHcC-----cCHHHHHhcCHHHHHhc----CCCC-EEEEecCCCCCcCHHHHHHHHHHHHhC-------CCCEEEEEECC
Confidence 1 23 23455778899988876 7777 999999999999999999999999998 89999999999
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 699 AGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 699 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+||++..... ..+.+..+++||.++|+.
T Consensus 554 ~gH~~~~~~~-~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 554 AGHAINTMED-AVKILLPAVFFLATQRER 581 (582)
T ss_dssp CCSSCCBHHH-HHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCChHH-HHHHHHHHHHHHHHHcCC
Confidence 9999985444 468888999999999864
No 11
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9.6e-49 Score=458.52 Aligned_cols=566 Identities=14% Similarity=0.121 Sum_probs=403.0
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCC---CeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG---STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNT 169 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g---~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~ 169 (734)
...++|||.+++|... ..||+.+..++ ..+.+... ...+..++|||||++|||+.+ .+
T Consensus 113 ~~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~-------~~~~~~~~~SPDG~~la~~~~------~~ 173 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHG-------EGFATDAKLSPKGGFVSFIRG------RN 173 (741)
T ss_dssp CCEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCS-------SSCEEEEEECTTSSEEEEEET------TE
T ss_pred eeEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccC-------CcccccccCCCCCCEEEEEeC------Cc
Confidence 4455689999999874 34777766555 43333332 123778999999999999874 17
Q ss_pred EEEEECCCCCcccccccccc-----------------cCeeEEEcCCcEEEEEEEecCCCCC--------CC--------
Q psy4818 170 LHIKDVDTGKDYPEVLKNVK-----------------FPSISWTHDHKGFFYNQYCDINGTA--------DG-------- 216 (734)
Q Consensus 170 l~v~dl~~g~~~~~~~~~~~-----------------~~~~~wSpDg~~l~y~~~~~~~~~~--------~~-------- 216 (734)
|+++|+.+|+....+..... ...++|||||++|+|.+.+...... .+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 99999999876443322211 2579999999999999875421000 00
Q ss_pred -CcccccCCcEEEEEECCC-CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-CCceEEEEeCCCCCCCcccCC
Q psy4818 217 -TETTAHMGQKIYYHVLGT-EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-QGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 217 -~~~~~~~~~~l~~~~l~t-~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~i~~~d~~~~~~~~l~~~ 293 (734)
..-..+....|+++++.+ +.. ..+............++| |||++|++...... ....|+++|+.++.
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~------- 323 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQT--QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ------- 323 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCC--EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC-------
T ss_pred CCCCCCCCeeEEEEEECCCCCce--EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc-------
Confidence 000011223788888877 542 222211123456778999 99999998876333 34799999998842
Q ss_pred CCceeeeccccc------eEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEE-EEeeCCEE
Q psy4818 294 FPLKTVIPGMDH------HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV-AAVANNKL 366 (734)
Q Consensus 294 ~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l 366 (734)
...+...... ....|+|||+ +++.++.++ ..+|+.++++++ .+.++.+. ..+.... ...+++.+
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~----~~~l~~~~-~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 324 --QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK----AAALTHGN-WSVDELLAVDEKAGLA 394 (741)
T ss_dssp --EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC----EEESCCSS-SCEEEEEEEETTTTEE
T ss_pred --eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC----eeeeeecc-eEEEeEeEEeCCCCEE
Confidence 2222222111 1124999998 777776654 457999997643 35555443 3333332 33455678
Q ss_pred EEEEEeCC--ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEE
Q psy4818 367 IVHYIQNV--RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIF 444 (734)
Q Consensus 367 ~~~~~~~~--~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~ 444 (734)
++....++ ..+|+.+++ +|+..+.|+.. ..+..+++++|++.+++.+++..+|+.+|+++. ..+ ..+.+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~-~g~~~~~l~~~-~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~-----~~~--~~~~l 465 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPL-QGGQPQRLSKA-PGMHSASFARNASVYVDSWSNNSTPPQIELFRA-----NGE--KIATL 465 (741)
T ss_dssp EEEECSSCTTCBEEEEEET-TCCCCEECCCS-CSEEEEEECTTSSEEEEEEEETTEEEEEEEEET-----TSC--EEECS
T ss_pred EEEEeCCCCceEEEEEEEc-CCCCeeecccC-CCceEEEECCCCCEEEEEecCCCCCCeEEEEEc-----CCC--eEEEe
Confidence 88877666 345676666 46555677653 345578899999999999999999999999998 333 33333
Q ss_pred eeccC--C--CCCCC--Cc-eEEEEEEEcCCC-cEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-CccccH----HHH
Q psy4818 445 RETIV--P--EFEPT--LF-QTKQVYFRSKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSI----SRC 511 (734)
Q Consensus 445 ~~~~~--~--~~~~~--~~-~~~~~~~~s~dg-~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~----~~~ 511 (734)
..... . .+... .+ ..+.+.+++.|| .+|+++++.|+++.+.++.|+||++||+++... ...|.. .+.
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~ 545 (741)
T 2ecf_A 466 VENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFN 545 (741)
T ss_dssp SCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHH
T ss_pred ccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHH
Confidence 32111 0 12222 44 689999999999 999999999988655677899999999987652 223431 245
Q ss_pred HHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC
Q psy4818 512 MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE 591 (734)
Q Consensus 512 ~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~ 591 (734)
+.|+++||+|+++|+||+|++|..|.......++...++|+.+++++|.+++.+|++|++|+|+|+||++++.++.++|+
T Consensus 546 ~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~ 625 (741)
T 2ecf_A 546 QYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASD 625 (741)
T ss_dssp HHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTT
T ss_pred HHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCC
Confidence 67777899999999999999998888776666667779999999999999888999999999999999999999999999
Q ss_pred ceeEEEEcCCcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHH
Q psy4818 592 LYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 670 (734)
Q Consensus 592 ~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~ 670 (734)
+|+++|+.+|+.++..+.. .+...+ +.|.. ..+.+...+|+.++.. ++.| +||+||++|.+|++.++
T Consensus 626 ~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~ 693 (741)
T 2ecf_A 626 SYACGVAGAPVTDWGLYDS-----HYTERYMDLPAR--NDAGYREARVLTHIEG----LRSP-LLLIHGMADDNVLFTNS 693 (741)
T ss_dssp TCSEEEEESCCCCGGGSBH-----HHHHHHHCCTGG--GHHHHHHHCSGGGGGG----CCSC-EEEEEETTCSSSCTHHH
T ss_pred ceEEEEEcCCCcchhhhcc-----ccchhhcCCccc--ChhhhhhcCHHHHHhh----CCCC-EEEEccCCCCCCCHHHH
Confidence 9999999999998754321 121222 44432 2344567789887775 7777 99999999999999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 671 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 671 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
.+++++|+.. ++++++++++++||++..... .+....+.+||.++|+
T Consensus 694 ~~~~~~l~~~-------~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 694 TSLMSALQKR-------GQPFELMTYPGAKHGLSGADA--LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHT-------TCCCEEEEETTCCSSCCHHHH--HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC-------CCceEEEEECCCCCCCCCCch--hHHHHHHHHHHHHhcC
Confidence 9999999998 889999999999999875433 5777889999999985
No 12
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2.5e-48 Score=452.40 Aligned_cols=562 Identities=13% Similarity=0.133 Sum_probs=396.6
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 175 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl 175 (734)
++++ ++++|..+ ..+++.+..++....++.... .+..++|||||++|||+.+ .+|+++|+
T Consensus 89 ~spd-~~~~~~~~------~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~SpdG~~la~~~~------~~i~v~~~ 148 (706)
T 2z3z_A 89 DAGR-GLVVLFTQ------GGLVGFDMLARKVTYLFDTNE-------ETASLDFSPVGDRVAYVRN------HNLYIARG 148 (706)
T ss_dssp ETTT-TEEEEEET------TEEEEEETTTTEEEEEECCTT-------CCTTCEECTTSSEEEEEET------TEEEEEEC
T ss_pred ECCC-CeEEEEEC------CEEEEEECCCCceEEccCCcc-------cccCCcCCCCCCEEEEEEC------CeEEEEec
Confidence 3466 77777642 347777766666555554321 2567899999999999643 37999999
Q ss_pred CC-----CCcccccccccc---------------cCeeEEEcCCcEEEEEEEecCCCCC--------CCCc---------
Q psy4818 176 DT-----GKDYPEVLKNVK---------------FPSISWTHDHKGFFYNQYCDINGTA--------DGTE--------- 218 (734)
Q Consensus 176 ~~-----g~~~~~~~~~~~---------------~~~~~wSpDg~~l~y~~~~~~~~~~--------~~~~--------- 218 (734)
.+ |+....+..... ...+.|||||+.|+|.+.++..... ....
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 149 GKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp BCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred CcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 98 876543322221 2689999999999999865321100 0000
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC-CceEEEEeCCCCCCCcccCCCCce
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ-GSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
-......+|+++++.++... .+............+.|||||++|++....... ...|+++|+.++. ...
T Consensus 229 g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--------~~~ 298 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGKTV--YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--------FVR 298 (706)
T ss_dssp TSCCCEEEEEEEETTTTEEE--ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--------EEE
T ss_pred CCCCCeeEEEEEECCCCceE--eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--------eee
Confidence 00112357999999876421 222111223466789999999999987654322 2689999998831 122
Q ss_pred eeeccccce-----E-EEEEe--cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEE
Q psy4818 298 TVIPGMDHH-----H-EIIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIV 368 (734)
Q Consensus 298 ~l~~~~~~~-----~-~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~ 368 (734)
.+....... . ..|+| ||+ +++.+++++ ..+|+.++.+++. ++.+..+. ..+...+.+. +++.+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g-~~~l~~~~~~~~~---~~~l~~~~-~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG-WNHLYLYDTTGRL---IRQVTKGE-WEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS-SCEEEEEETTSCE---EEECCCSS-SCEEEEEEECTTSSEEEE
T ss_pred EEEEccCCCeECccCCceeecCCCCE-EEEEEccCC-ccEEEEEECCCCE---EEecCCCC-eEEEeeeEEcCCCCEEEE
Confidence 222111111 1 24999 887 555666554 4679999976543 34454433 3333323443 4457777
Q ss_pred EEEeCC--ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEee
Q psy4818 369 HYIQNV--RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 446 (734)
Q Consensus 369 ~~~~~~--~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~ 446 (734)
....++ ...|+.+|+.+|+ .+.++.. +.+..+++++|++.+++.+++..+|+.++++|+ .++ +.+++..
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~~~-~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~-----~~~--~~~~~~~ 443 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLTPE-SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI-----GKG--SHTLLEA 443 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESCCS-SSEEEEEECTTSSEEEEEEECSSCSCEEEEEES-----SSC--EEEEEEC
T ss_pred EecCCCCceEEEEEEEcCCCC-ceeccCC-CceEEEEECCCCCEEEEEecCCCCCcEEEEEEC-----CCC--eEeeccc
Confidence 776654 3589999997766 4566533 345678899999999999999999999999999 455 3333433
Q ss_pred ccCCCCCCCCc-eEEEEEEEcCCC-cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHH---HHHHHHhcCeE
Q psy4818 447 TIVPEFEPTLF-QTKQVYFRSKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSIS---RCMFLRHFNGI 520 (734)
Q Consensus 447 ~~~~~~~~~~~-~~~~~~~~s~dg-~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~---~~~~l~~~G~~ 520 (734)
. . .+....+ ..+.+.+++.|| .+++++++.|+++++++++|+||++|||++.... ..|... +.+.|+++||+
T Consensus 444 ~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~ 521 (706)
T 2z3z_A 444 K-N-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYA 521 (706)
T ss_dssp C--------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCE
T ss_pred c-c-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcE
Confidence 2 1 1333333 578899999999 8999999999987666788999999999877642 345543 56777778999
Q ss_pred EEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 521 YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 521 v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
|+++|+||+|++|..|.......++...++|+.+++++|.+++.+|++|++|+|+|+||++++.++.++|++|+++|+.+
T Consensus 522 v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 601 (706)
T 2z3z_A 522 VFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 601 (706)
T ss_dssp EEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred EEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcC
Confidence 99999999999999888776666667788999999999998888999999999999999999999999999999999999
Q ss_pred CcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHh
Q psy4818 601 GALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 679 (734)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~ 679 (734)
|+.++..+.. .+...+ +.|... .+.+...+|...+.. ++.| +||+||++|.+||+.++.+++++|++
T Consensus 602 ~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~ 669 (706)
T 2z3z_A 602 PVIDWNRYAI-----MYGERYFDAPQEN--PEGYDAANLLKRAGD----LKGR-LMLIHGAIDPVVVWQHSLLFLDACVK 669 (706)
T ss_dssp CCCCGGGSBH-----HHHHHHHCCTTTC--HHHHHHHCGGGGGGG----CCSE-EEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred CccchHHHHh-----hhhhhhcCCcccC--hhhhhhCCHhHhHHh----CCCC-EEEEeeCCCCCCCHHHHHHHHHHHHH
Confidence 9998764322 122222 555421 234556788877775 6766 99999999999999999999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
. +++++++++|++||++... ...+.+..+.+||.++|
T Consensus 670 ~-------~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 670 A-------RTYPDYYVYPSHEHNVMGP--DRVHLYETITRYFTDHL 706 (706)
T ss_dssp H-------TCCCEEEEETTCCSSCCTT--HHHHHHHHHHHHHHHHC
T ss_pred C-------CCCeEEEEeCCCCCCCCcc--cHHHHHHHHHHHHHHhC
Confidence 8 8899999999999998765 23677888999999876
No 13
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=3.5e-49 Score=460.91 Aligned_cols=582 Identities=12% Similarity=0.093 Sum_probs=396.0
Q ss_pred CCcEEeCCeEEEEEEcCCCC----eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEE
Q psy4818 94 SAPQRQENNYFYFHNKGLQN----HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNT 169 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~----~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~ 169 (734)
...+|||.+++|...+.... ...+|+.+..++..+.|.... .+...+..++|||||++|||..+ .+
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~----~~~~~~~~~~~SPdG~~la~~~~------~~ 135 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE----VSNAKLQYAGWGPKGQQLIFIFE------NN 135 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT----CCSCCCSBCCBCSSTTCEEEEET------TE
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc----cccccccccEECCCCCEEEEEEC------Ce
Confidence 34568999999987643221 256777776666554443321 11122567999999999999885 27
Q ss_pred EEEEECCCCCccccccccc-------------------ccCeeEEEcCCcEEEEEEEecCCCC--------C--------
Q psy4818 170 LHIKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGT--------A-------- 214 (734)
Q Consensus 170 l~v~dl~~g~~~~~~~~~~-------------------~~~~~~wSpDg~~l~y~~~~~~~~~--------~-------- 214 (734)
|+++|+++|+.+..+.... ....++|||||+.|+|.+.+..... .
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999999988654332211 1146999999999999987642110 0
Q ss_pred -----CCCcccccCCcEEEEEECCCCCCCCeeEEecCC----CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 215 -----DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN----GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 215 -----~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~----~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
+|. ......|+++++.++... ..+..+. ....+..++|||||++|++...+......|+++|++++
T Consensus 216 ~~~~~~G~---~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 216 YHYPKAGS---ENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EECCBTTS---CCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred ccCCCCCC---CCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 000 011237999999876531 1112111 13466789999999998877666444578999999884
Q ss_pred CCCcccCCCCceeeecccc-c------eEEEEEecCCeEEEE-eCCCC---CCceEEEEe-cCCCCCCCceEeecCCCCc
Q psy4818 286 PDGKISGKFPLKTVIPGMD-H------HHEIIANNGPELIVK-TTKNA---PKGKVVTIN-LNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 286 ~~~~l~~~~~~~~l~~~~~-~------~~~~~s~dg~~l~~~-s~~~~---~~~~l~~~d-~~~~~~~~~~~l~~~~~~~ 353 (734)
. ...+..... . ....|+|||+.|++. ++.++ ...+|+.+| ..++.....+.++.+. ..
T Consensus 291 ~---------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~ 360 (723)
T 1xfd_A 291 V---------CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-WD 360 (723)
T ss_dssp C---------EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-SC
T ss_pred c---------ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC-eE
Confidence 2 122221110 0 122499999999997 54443 145799999 4444310123444332 33
Q ss_pred eeEEEEE-eeCCEEEEEEEeC--CceeEEEEECCCCceeeeeCC---CCceEEeeccCcccceEEEEEecCCCCceEEEE
Q psy4818 354 TLDVVAA-VANNKLIVHYIQN--VRSVMDLHDLNTGKRLHSFPL---DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 427 (734)
Q Consensus 354 ~~~~~~~-~~~~~l~~~~~~~--~~~~l~~~dl~~g~~~~~l~~---~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~ 427 (734)
+.....+ .+++.|++....+ +..+|+.+++..+...+.|+. +.+.+..+++++|++.+++.++++..|..++ +
T Consensus 361 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~-~ 439 (723)
T 1xfd_A 361 VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTV-H 439 (723)
T ss_dssp EEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEE-E
T ss_pred EEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEE-E
Confidence 3333333 4556777777665 445777777643333455553 2344567888999999999999999998665 4
Q ss_pred eCCCCcCCCCCCceeEEeecc-C-CCCCCCCc-eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-C
Q psy4818 428 NIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-L 503 (734)
Q Consensus 428 d~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~ 503 (734)
+. .+++ +..++.... + ..+....+ ..+.+.+++.|| +|+++++.|+++++.++.|+||++||+++... .
T Consensus 440 ~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~ 512 (723)
T 1xfd_A 440 NT-----TDKK-KMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA 512 (723)
T ss_dssp ET-----TTCC-EEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC
T ss_pred EC-----CCCC-EEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccC
Confidence 65 3442 333333211 1 01222233 567888889999 99999999998766788999999999987642 3
Q ss_pred ccccH-HHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHH
Q psy4818 504 PTFSI-SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 582 (734)
Q Consensus 504 ~~~~~-~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 582 (734)
..|.. ....+|+++||+|+++|+||+|++|..|.......++...++|+.+++++|.+++.+|++||+|+|+|+||+++
T Consensus 513 ~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 592 (723)
T 1xfd_A 513 EKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLS 592 (723)
T ss_dssp CCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHH
T ss_pred ccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHH
Confidence 33331 23456776799999999999999998888766656666789999999999998888899999999999999999
Q ss_pred HHHHhcC----CCceeEEEEcCCcchhccccccccCcccccc-cCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEE
Q psy4818 583 GACLNQR----PELYGAALILVGALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVL 657 (734)
Q Consensus 583 ~~~~~~~----p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~ 657 (734)
+.++.++ |++|+++|+.+|+.++..+.. .+... +|.|.... ..+...+|...+.. ++.+|+||+
T Consensus 593 ~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~P~lii 661 (723)
T 1xfd_A 593 TYILPAKGENQGQTFTCGSALSPITDFKLYAS-----AFSERYLGLHGLDN--RAYEMTKVAHRVSA----LEEQQFLII 661 (723)
T ss_dssp HHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH-----HHHHHHHCCCSSCC--SSTTTTCTHHHHTS----CCSCEEEEE
T ss_pred HHHHHhccccCCCeEEEEEEccCCcchHHhhh-----hccHhhcCCccCCh--hHHHhcChhhHHhh----cCCCCEEEE
Confidence 9999999 999999999999988764321 11111 24442111 12334555555554 663239999
Q ss_pred ecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 658 TGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 658 ~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
||++|.+||+.++.+++++|++. ++++++++++++||++..... ..+.+..+.+||.++|++
T Consensus 662 ~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~ 723 (723)
T 1xfd_A 662 HPTADEKIHFQHTAELITQLIRG-------KANYSLQIYPDESHYFTSSSL-KQHLYRSIINFFVECFRI 723 (723)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHT-------TCCCEEEEETTCCSSCCCHHH-HHHHHHHHHHHHTTTTCC
T ss_pred EeCCCCCcCHhHHHHHHHHHHHC-------CCCeEEEEECCCCcccccCcc-hHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998 889999999999999854433 367788899999988863
No 14
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.92 E-value=1.1e-24 Score=233.36 Aligned_cols=276 Identities=16% Similarity=0.101 Sum_probs=197.3
Q ss_pred EEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccC-CCCCCCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCc
Q psy4818 411 VFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIV-PEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNP 489 (734)
Q Consensus 411 l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P 489 (734)
+++..+++.+|.++|.+|. .+. .......... ..++.....++++++++ ||.+|+++++.|++. ++.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~---~~~P 153 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDE-----RRQ--KGQARKVELYQKAAPLLSPPAERHELVV-DGIPMPVYVRIPEGP---GPHP 153 (386)
T ss_dssp HHHHHHHHHHHHHTTCCST-----HHH--HHHHHHHHHHHHHGGGSSSCEEEEEEEE-TTEEEEEEEECCSSS---CCEE
T ss_pred HHHHHHHhhceeeeeccCC-----CCC--HHHHHHHHHHHHHHhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC---CCCC
Confidence 5556667778888887765 111 0000000001 01222345789999988 899999999999873 6789
Q ss_pred EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCc
Q psy4818 490 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 569 (734)
Q Consensus 490 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 569 (734)
+||++||+.+... ..+.. ...|+++||+|+++|+||+|+.. ..........+++.+++++|.+++.+++++
T Consensus 154 ~vl~~hG~~~~~~-~~~~~--~~~l~~~G~~v~~~d~rG~G~s~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (386)
T 2jbw_A 154 AVIMLGGLESTKE-ESFQM--ENLVLDRGMATATFDGPGQGEMF------EYKRIAGDYEKYTSAVVDLLTKLEAIRNDA 224 (386)
T ss_dssp EEEEECCSSCCTT-TTHHH--HHHHHHTTCEEEEECCTTSGGGT------TTCCSCSCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEEeCCCCccHH-HHHHH--HHHHHhCCCEEEEECCCCCCCCC------CCCCCCccHHHHHHHHHHHHHhCCCcCccc
Confidence 9999888654333 22332 45566679999999999966541 111223334457889999999998899999
Q ss_pred EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc----ccccccCCCCCHHHH-HHHHhCCccCCCCC
Q psy4818 570 ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY----YSESEFGSPNNKTHF-HNLLSYSPLHNIKV 644 (734)
Q Consensus 570 i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~----~~~~~~g~~~~~~~~-~~~~~~sp~~~~~~ 644 (734)
|+|+|+|+||+++++++.+ |++|+++|+. |+.++...... ... .+...+|.+...+.+ ..+..++|..++..
T Consensus 225 i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 301 (386)
T 2jbw_A 225 IGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL-ETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQ 301 (386)
T ss_dssp EEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG-SCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGG
T ss_pred EEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh-ccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcc
Confidence 9999999999999999998 8899999999 99987654421 110 111234554444555 67788999888875
Q ss_pred CCCCccCCcEEEEecCCCCCCCChHHHHHHHHH-HhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 645 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL-QEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 645 p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
+++| +||++|++|. |++.++.+++++| +. ++++++++++||.+.. ...+....+.+||.+
T Consensus 302 ----i~~P-~Lii~G~~D~-v~~~~~~~l~~~l~~~----------~~~~~~~~~~gH~~~~---~~~~~~~~i~~fl~~ 362 (386)
T 2jbw_A 302 ----IACP-TYILHGVHDE-VPLSFVDTVLELVPAE----------HLNLVVEKDGDHCCHN---LGIRPRLEMADWLYD 362 (386)
T ss_dssp ----CCSC-EEEEEETTSS-SCTHHHHHHHHHSCGG----------GEEEEEETTCCGGGGG---GTTHHHHHHHHHHHH
T ss_pred ----cCCC-EEEEECCCCC-CCHHHHHHHHHHhcCC----------CcEEEEeCCCCcCCcc---chHHHHHHHHHHHHH
Confidence 7777 9999999999 9999999999988 42 4689999999997632 235677889999999
Q ss_pred HcCCC
Q psy4818 724 SLGLK 728 (734)
Q Consensus 724 ~l~~~ 728 (734)
+|+..
T Consensus 363 ~l~~~ 367 (386)
T 2jbw_A 363 VLVAG 367 (386)
T ss_dssp HHTSS
T ss_pred hcCCc
Confidence 99865
No 15
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.91 E-value=6.4e-23 Score=214.38 Aligned_cols=243 Identities=14% Similarity=0.069 Sum_probs=169.5
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-CccccHHHHHHHHh-cCeEEEEEecccCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRH-FNGIYAIPNIRGGGEL 532 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~ 532 (734)
..+..+.+++++.|| .|++.+++|++ ...|+||++|||..... ...+.. ....|++ +||+|+.+|||+++++
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~V~~~dyr~~p~~ 132 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDR-IMRLLARYTGCTVIGIDYSLSPQA 132 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHH-HHHHHHHHHCSEEEEECCCCTTTS
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHH-HHHHHHHHcCCEEEEeeCCCCCCC
Confidence 345669999999999 79999999975 23499999999863332 223333 4455554 6999999999997764
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCCc------eeEEEEcCCcc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL------YGAALILVGAL 603 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~------~~a~v~~~~~~ 603 (734)
. ....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.+.|+. ++++|+.+|+.
T Consensus 133 ~-----------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~ 201 (326)
T 3ga7_A 133 R-----------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLY 201 (326)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCC
T ss_pred C-----------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEecccc
Confidence 3 2234689999999998863 47999999999999999999999887764 89999999988
Q ss_pred hhccccccccCcccccccCCCCCHHHHHHH---------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHH
Q psy4818 604 DMLRFNKFTIAYYSESEFGSPNNKTHFHNL---------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 674 (734)
Q Consensus 604 d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~ 674 (734)
+......... +...+. ....+....+ ...+|+............||+||+||+.|+.| .++.+++
T Consensus 202 ~~~~~~~~~~---~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~ 275 (326)
T 3ga7_A 202 GLQDSVSRRL---FGGAWD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLH 275 (326)
T ss_dssp SCSCCHHHHH---CCCTTT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHH
T ss_pred ccCCChhHhh---hcCCCC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHH
Confidence 7543211000 000000 0111111111 11233322100000024556999999999988 5899999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcCC
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++|++. |+++++++|++++|++... .....+...++.+||.++|+.
T Consensus 276 ~~l~~~-------g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 276 QTLQAH-------QQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHT-------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHC-------CCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 999999 9999999999999998432 122357788899999999853
No 16
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.91 E-value=1.9e-24 Score=227.30 Aligned_cols=284 Identities=12% Similarity=0.061 Sum_probs=175.0
Q ss_pred CcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeE-EeeccCC-CCCC---CCceEEEEEEEcCCCcEEeEEEEEe
Q psy4818 405 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTI-FRETIVP-EFEP---TLFQTKQVYFRSKDGTRVPMYIIHR 479 (734)
Q Consensus 405 ~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~-~~~~---~~~~~~~~~~~s~dg~~i~~~~~~p 479 (734)
+++.+++++.+.++..|...++++. +| .... +..+..+ ..++ ..+..+.+.+.+ +..+.+.++.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g--~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P 73 (338)
T 2o7r_A 4 DHLETTGSSDPNTNLLKYLPIVLNP------DR--TITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLP 73 (338)
T ss_dssp --------------CTTTCSCEECT------TS--CEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEE
T ss_pred CCCCCceeeccCcccccccceEECC------CC--eEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeC
Confidence 3455678888888877777677765 33 2221 1222222 2222 457888999876 55688899999
Q ss_pred ccc-cCCCCCcEEEEecCCCCCcCCcc---ccHHHHHHHH-hcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHH
Q psy4818 480 VGA-LRNRRNPVIIYGYGGYGVSVLPT---FSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA 554 (734)
Q Consensus 480 ~~~-~~~~~~P~vv~~hGg~~~~~~~~---~~~~~~~~l~-~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~ 554 (734)
++. ..+++.|+||++|||........ |... ...|+ ++||+|+.+|+||+++.. ....++|+.+
T Consensus 74 ~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~-~~~la~~~g~~vv~~d~rg~~~~~-----------~~~~~~d~~~ 141 (338)
T 2o7r_A 74 RHALYNSAKLPLVVYFHGGGFILFSAASTIFHDF-CCEMAVHAGVVIASVDYRLAPEHR-----------LPAAYDDAME 141 (338)
T ss_dssp GGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHH-HHHHHHHHTCEEEEEECCCTTTTC-----------TTHHHHHHHH
T ss_pred CCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHH-HHHHHHHCCcEEEEecCCCCCCCC-----------CchHHHHHHH
Confidence 874 34578999999999864433222 4433 34454 579999999999976532 2245789999
Q ss_pred HHHHHHHcC------CCCCCcEEEEEcChHHHHHHHHHhcCCC--------ceeEEEEcCCcchhccccccccCcccccc
Q psy4818 555 AAEYMINKK------YTKPKYITIMGGSNGGLLVGACLNQRPE--------LYGAALILVGALDMLRFNKFTIAYYSESE 620 (734)
Q Consensus 555 ~~~~l~~~~------~~d~~ri~i~G~S~GG~~~~~~~~~~p~--------~~~a~v~~~~~~d~~~~~~~~~~~~~~~~ 620 (734)
+++||.++. .+|++|++|+|+|+||++++.++.++|+ .++++|+.+|+++......... ..
T Consensus 142 ~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~-----~~ 216 (338)
T 2o7r_A 142 ALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSEL-----RL 216 (338)
T ss_dssp HHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHH-----HT
T ss_pred HHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhh-----cc
Confidence 999998763 2677999999999999999999999888 8999999999887543211000 00
Q ss_pred cCCCC-CHHHHHHHH-------------hCCccCC------CCCCCCCccCC-cEEEEecCCCCCCCChHHHHHHHHHHh
Q psy4818 621 FGSPN-NKTHFHNLL-------------SYSPLHN------IKVPPNNTQYP-ATLVLTGDHDDRVPPLHSYKFIATLQE 679 (734)
Q Consensus 621 ~g~~~-~~~~~~~~~-------------~~sp~~~------~~~p~~~~~~P-~~Li~~g~~D~~v~~~~~~~~~~~L~~ 679 (734)
...+. .......+. ..+|+.. +... .+.| |+||++|++|..++ ++.+++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~ 291 (338)
T 2o7r_A 217 ANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKI---RSLGWRVMVVGCHGDPMID--RQMELAERLEK 291 (338)
T ss_dssp TTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHH---HHHTCEEEEEEETTSTTHH--HHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhh---cCCCCCEEEEECCCCcchH--HHHHHHHHHHH
Confidence 00000 000000000 0112111 1110 1144 59999999999886 66889999998
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCc-hHHhHHHHHHHHHHHHHHcCC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTP-LMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~~ 727 (734)
. +.++++++++++||++... .....+....+.+||.++++.
T Consensus 292 ~-------~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 292 K-------GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp T-------TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred C-------CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 8 8899999999999987532 222356778899999988764
No 17
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.91 E-value=4e-23 Score=210.39 Aligned_cols=238 Identities=15% Similarity=0.111 Sum_probs=170.4
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
..+.+.+|..+.+++..|....++++.|+||++|||............+...|+++||.|+++|+||.|+.. .+.
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~-~~~---- 91 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGT-NYN---- 91 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCC-CSC----
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcC-CCC----
Confidence 345567888888777665443234788999999997533333333344556777789999999999976422 111
Q ss_pred cccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhc-CCCceeEEEEcCCcchhccccccccCccc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKFTIAYYS 617 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 617 (734)
.....++|+.+++++|.++. .+|+++|+|+|+|+||++++.++.+ .+..++++|+.+|+.++....... ..+
T Consensus 92 --~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~--~~~ 167 (276)
T 3hxk_A 92 --FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSD--LSH 167 (276)
T ss_dssp --THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSS--SSS
T ss_pred --cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcc--hhh
Confidence 11134689999999998863 3789999999999999999999987 788999999999998865442211 111
Q ss_pred ccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 618 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 618 ~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
..+- +.. . ..++|...+.. +..| +||+||++|..||+.++.+++++|++. +.++++++++
T Consensus 168 -~~~~-~~~---~---~~~~~~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------~~~~~~~~~~ 227 (276)
T 3hxk_A 168 -FNFE-IEN---I---SEYNISEKVTS----STPP-TFIWHTADDEGVPIYNSLKYCDRLSKH-------QVPFEAHFFE 227 (276)
T ss_dssp -SCCC-CSC---C---GGGBTTTTCCT----TSCC-EEEEEETTCSSSCTHHHHHHHHHHHTT-------TCCEEEEEES
T ss_pred -hhcC-chh---h---hhCChhhcccc----CCCC-EEEEecCCCceeChHHHHHHHHHHHHc-------CCCeEEEEEC
Confidence 1111 111 1 35567766665 5556 999999999999999999999999988 8899999999
Q ss_pred CCCCCCCCchH-----------HhHHHHHHHHHHHHHHcCCC
Q psy4818 698 DAGHGQGTPLM-----------KSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 698 ~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~l~~~ 728 (734)
++||++..... ...++...+.+||.++....
T Consensus 228 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 228 SGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp CCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCCccccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 99998864222 23567777889999987543
No 18
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.90 E-value=2.5e-23 Score=218.59 Aligned_cols=247 Identities=19% Similarity=0.190 Sum_probs=175.0
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
...+.++++++++.||.+|+++++.|++. .++.|+||++||+.+....+ ... ..++++||+|+++|+||.|+.+
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~~~---~~~-~~l~~~G~~v~~~d~rG~g~s~ 136 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFP---HDW-LFWPSMGYICFVMDTRGQGSGW 136 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCCG---GGG-CHHHHTTCEEEEECCTTCCCSS
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCCCc---hhh-cchhhCCCEEEEecCCCCCCcc
Confidence 34568999999999999999999999863 46789999999986554322 122 2345579999999999988554
Q ss_pred chhhh-----------------ccccccC----CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc
Q psy4818 534 EDWHN-----------------AGRLLKK----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 592 (734)
Q Consensus 534 ~~~~~-----------------~~~~~~~----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 592 (734)
..... .+..... ...++|+.+++++|.++..+|++||+|+|+|+||++++.++.++|+
T Consensus 137 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~- 215 (337)
T 1vlq_A 137 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK- 215 (337)
T ss_dssp SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS-
T ss_pred cCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCC-
Confidence 21000 0000000 1357899999999999888899999999999999999999999984
Q ss_pred eeEEEEcCCcchh-ccccccccCcccc--ccc--CCCC-CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCC
Q psy4818 593 YGAALILVGALDM-LRFNKFTIAYYSE--SEF--GSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 666 (734)
Q Consensus 593 ~~a~v~~~~~~d~-~~~~~~~~~~~~~--~~~--g~~~-~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~ 666 (734)
++++|+.+|+++. ...........+. .+| ..+. ..+.+..+..++|...+.. ++.| +||++|++|.+||
T Consensus 216 v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~~p 290 (337)
T 1vlq_A 216 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR----AKIP-ALFSVGLMDNICP 290 (337)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTT----CCSC-EEEEEETTCSSSC
T ss_pred ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHH----cCCC-EEEEeeCCCCCCC
Confidence 7899988886542 2211110000010 111 2232 2334455666777766665 6666 9999999999999
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 667 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 667 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+.++.+++++|+ .++++++++++||++.. .+....+++||.++|+.
T Consensus 291 ~~~~~~~~~~l~----------~~~~~~~~~~~gH~~~~-----~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 291 PSTVFAAYNYYA----------GPKEIRIYPYNNHEGGG-----SFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp HHHHHHHHHHCC----------SSEEEEEETTCCTTTTH-----HHHHHHHHHHHHHHHC-
T ss_pred chhHHHHHHhcC----------CCcEEEEcCCCCCCCcc-----hhhHHHHHHHHHHHHhc
Confidence 999998888763 25789999999999742 24567789999998863
No 19
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.90 E-value=3e-23 Score=208.93 Aligned_cols=216 Identities=15% Similarity=0.120 Sum_probs=140.3
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..|+.+....||.+|+++++.|++ .++.|+||++||+.+....+.+.. .+++|+++||+|+.+|+||+|+.+....
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~---~~~~p~Vl~~HG~g~~~~~~~~~~-~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAE---GSSDRLVLLGHGGTTHKKVEYIEQ-VAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS---SCCSEEEEEEC--------CHHHH-HHHHHHHTTEEEEEECCCC---------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCC---CCCCCEEEEeCCCcccccchHHHH-HHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 344444445799999999999986 457799999999977655544443 4677888999999999999887654332
Q ss_pred hccccccC---------------CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 538 NAGRLLKK---------------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 538 ~~~~~~~~---------------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
........ ...+.|..+++++|... +|++||+++|+|+||++++.++.+.|++ +++|+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pri-~Aav~~~~~ 181 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRI-KVALLGLMG 181 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTTE-EEEEEESCC
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCce-EEEEEeccc
Confidence 21111100 11245777788887654 7899999999999999999999998865 666654433
Q ss_pred chhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 603 LDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 603 ~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
.+.. ... ++...+.. +++| +||+||++|.+||++++++++++|.
T Consensus 182 ~~~~-------------------~~~--------~~~~~a~~----i~~P-~Li~hG~~D~~vp~~~~~~l~~al~---- 225 (259)
T 4ao6_A 182 VEGV-------------------NGE--------DLVRLAPQ----VTCP-VRYLLQWDDELVSLQSGLELFGKLG---- 225 (259)
T ss_dssp TTST-------------------THH--------HHHHHGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHCC----
T ss_pred cccc-------------------ccc--------chhhhhcc----CCCC-EEEEecCCCCCCCHHHHHHHHHHhC----
Confidence 2110 001 11122232 6667 9999999999999999999999884
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+....++++++ +|... + +.+..+.+++||.++|+
T Consensus 226 -----~~~k~l~~~~G-~H~~~-p---~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 226 -----TKQKTLHVNPG-KHSAV-P---TWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp -----CSSEEEEEESS-CTTCC-C---HHHHTHHHHHHHHHHCC
T ss_pred -----CCCeEEEEeCC-CCCCc-C---HHHHHHHHHHHHHHhcC
Confidence 33567888887 56433 2 13566778999999985
No 20
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=8.8e-23 Score=207.95 Aligned_cols=236 Identities=11% Similarity=0.038 Sum_probs=164.3
Q ss_pred ceEEEEEEEcCCCcEEeEEEEEecc---ccCCCCCcEEEEecCCCCCcC-CccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 457 FQTKQVYFRSKDGTRVPMYIIHRVG---ALRNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 457 ~~~~~~~~~s~dg~~i~~~~~~p~~---~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
+..+.+.+. .+|..+++.++.|+. +...++.|+||++|||..... ...|. .+...|+++||.|+++|+||+|+.
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~g~~ 79 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEA-PIATRMMAAGMHTVVLNYQLIVGD 79 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHH-HHHHHHHHTTCEEEEEECCCSTTT
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccch-HHHHHHHHCCCEEEEEecccCCCC
Confidence 445677774 577789999999983 123567899999999743322 22333 345666778999999999996633
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--------------CCceeE
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--------------PELYGA 595 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--------------p~~~~a 595 (734)
+. .....++|+.+++++|.+.. .+|+++|+|+|+|+||++++.++.++ |..+++
T Consensus 80 ~~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
T 3bxp_A 80 QS---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAA 150 (277)
T ss_dssp CC---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSE
T ss_pred Cc---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCE
Confidence 32 12234779999999987752 26788999999999999999999875 678999
Q ss_pred EEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHH
Q psy4818 596 ALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIA 675 (734)
Q Consensus 596 ~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~ 675 (734)
+|+.+|+.++...... ...+...+ +..+...+|...+.. ...| +||+||++|..||+.++.++++
T Consensus 151 ~v~~~p~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~ 215 (277)
T 3bxp_A 151 IILGYPVIDLTAGFPT--TSAARNQI--------TTDARLWAAQRLVTP----ASKP-AFVWQTATDESVPPINSLKYVQ 215 (277)
T ss_dssp EEEESCCCBTTSSSSS--SHHHHHHH--------CSCGGGSBGGGGCCT----TSCC-EEEEECTTCCCSCTHHHHHHHH
T ss_pred EEEeCCcccCCCCCCC--ccccchhc--------cchhhhcCHhhcccc----CCCC-EEEEeeCCCCccChHHHHHHHH
Confidence 9999999875432110 00000000 001234566666554 4445 9999999999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch-------------HHhHHHHHHHHHHHHHHc
Q psy4818 676 TLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL-------------MKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 676 ~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-------------~~~~~~~~~~~~fl~~~l 725 (734)
+|++. +.+++++++++++|++.... ....++...+.+||.++.
T Consensus 216 ~l~~~-------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 216 AMLQH-------QVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHT-------TCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHC-------CCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 99998 88999999999999775332 223577888899998764
No 21
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.90 E-value=1e-22 Score=215.57 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=166.9
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEE-eccc--------------------cCCCCCcEEEEecCCCCCcCCc---cccHHH
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIH-RVGA--------------------LRNRRNPVIIYGYGGYGVSVLP---TFSISR 510 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~-p~~~--------------------~~~~~~P~vv~~hGg~~~~~~~---~~~~~~ 510 (734)
..+..+.+.+.+.+| +.+.+|+ |+.. ...++.|+||++|||....... .|.. +
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~-~ 136 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDS-L 136 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHH-H
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHH-H
Confidence 456789999998888 7888887 8753 2346789999999985433222 2333 3
Q ss_pred HHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC----CCCCC-cEEEEEcChHHHHHHH
Q psy4818 511 CMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK----YTKPK-YITIMGGSNGGLLVGA 584 (734)
Q Consensus 511 ~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~~~~ 584 (734)
...|++ .||+|+.+|||++++.. ....++|+.++++||.++. .+|++ ||+|+|+|+||++++.
T Consensus 137 ~~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~ 205 (365)
T 3ebl_A 137 CRRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHH 205 (365)
T ss_dssp HHHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHH
Confidence 344544 49999999999977543 1234789999999999765 58999 9999999999999999
Q ss_pred HHhcCCC---ceeEEEEcCCcchhccccccccCcccccccCCC-CCHHHHHHH-------------HhCCccC-CCCCCC
Q psy4818 585 CLNQRPE---LYGAALILVGALDMLRFNKFTIAYYSESEFGSP-NNKTHFHNL-------------LSYSPLH-NIKVPP 646 (734)
Q Consensus 585 ~~~~~p~---~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-------------~~~sp~~-~~~~p~ 646 (734)
++.+.++ .++++|+.+|+++......... .....+ ...+....+ ...+|+. ......
T Consensus 206 ~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 280 (365)
T 3ebl_A 206 VAVRAADEGVKVCGNILLNAMFGGTERTESER-----RLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLG 280 (365)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCCCSSCCHHHH-----HHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCT
T ss_pred HHHHHHhcCCceeeEEEEccccCCCcCChhhh-----hcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhc
Confidence 9987665 7899999999987653221000 000000 001111100 0122332 111100
Q ss_pred CCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC--chHHhHHHHHHHHHHHHHH
Q psy4818 647 NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT--PLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 647 ~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 724 (734)
++.+||+||+||++|..+ .++.+++++|++. |+++++++|++++|++.. ......+.+.++.+||.++
T Consensus 281 -~~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~-------g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~ 350 (365)
T 3ebl_A 281 -GLPFAKSLIIVSGLDLTC--DRQLAYADALRED-------GHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNAN 350 (365)
T ss_dssp -TSCCCCEEEEEETTSTTH--HHHHHHHHHHHHT-------TCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCEEEEEcCcccch--hHHHHHHHHHHHC-------CCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHh
Confidence 135678999999999654 5678999999998 999999999999999761 1123468888999999999
Q ss_pred cCCCC
Q psy4818 725 LGLKY 729 (734)
Q Consensus 725 l~~~~ 729 (734)
++.+.
T Consensus 351 ~~~~~ 355 (365)
T 3ebl_A 351 LYYGS 355 (365)
T ss_dssp CC---
T ss_pred hhccc
Confidence 97653
No 22
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.3e-22 Score=201.82 Aligned_cols=225 Identities=16% Similarity=0.186 Sum_probs=164.0
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
.+..+.+.+++ +|..+.++++.|++. .++.|+||++||..+.. ..+ ..++..|+++||.|+++|+||.|+....
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~--~~~~p~vv~~HG~~g~~--~~~-~~~~~~l~~~G~~v~~~d~~g~g~~~~~ 76 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA--DGPLPIVIVVQEIFGVH--EHI-RDLCRRLAQEGYLAIAPELYFRQGDPNE 76 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC--CSCEEEEEEECCTTCSC--HHH-HHHHHHHHHTTCEEEEECTTTTTCCGGG
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC--CCCCCEEEEEcCcCccC--HHH-HHHHHHHHHCCcEEEEecccccCCCCCc
Confidence 45678889988 889999999999862 35689999999966543 223 3345667778999999999997665443
Q ss_pred hhhcccc-------ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 536 WHNAGRL-------LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 536 ~~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
+...... .......+|+.+++++|.+++ +|+++|+++|+|+||.+++.++.++|+ ++++|+.+|......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~- 153 (241)
T 3f67_A 77 YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK- 153 (241)
T ss_dssp CCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC-
T ss_pred hhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC-
Confidence 3221110 011234789999999998887 888999999999999999999999998 566766555421100
Q ss_pred cccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 688 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~ 688 (734)
.. +...+|...+.. ++.| +|+++|++|..|++.++.+++++|++. +
T Consensus 154 ----------~~------------~~~~~~~~~~~~----~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~-------~ 199 (241)
T 3f67_A 154 ----------SL------------NSPKHPVDIAVD----LNAP-VLGLYGAKDASIPQDTVETMRQALRAA-------N 199 (241)
T ss_dssp ----------CS------------SSCCCHHHHGGG----CCSC-EEEEEETTCTTSCHHHHHHHHHHHHHT-------T
T ss_pred ----------cc------------CCccCHHHhhhh----cCCC-EEEEEecCCCCCCHHHHHHHHHHHHHc-------C
Confidence 00 011223333333 4555 999999999999999999999999988 8
Q ss_pred CcEEEEEeCCCCCCCCCc------hHHhHHHHHHHHHHHHH
Q psy4818 689 NPLLLRVEQDAGHGQGTP------LMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~------~~~~~~~~~~~~~fl~~ 723 (734)
.+++++++++++|++... .....+.+..+++||.+
T Consensus 200 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 200 ATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp CSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 899999999999998632 22235667778899865
No 23
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=1.4e-22 Score=216.40 Aligned_cols=220 Identities=15% Similarity=0.187 Sum_probs=171.3
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccc--------cH-HHHHHHHhcCeEEEEEecc
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF--------SI-SRCMFLRHFNGIYAIPNIR 527 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~--------~~-~~~~~l~~~G~~v~~~~~r 527 (734)
..+.+.+.+. ||..+++.++.|+++.+.++.|+||++||+.+....+.. .. ....+....|+.|+.+|+|
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~ 222 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCP 222 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCC
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCC
Confidence 4677889998 999999999999987667889999999998654332111 00 0122344568999999999
Q ss_pred cCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc
Q psy4818 528 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 607 (734)
Q Consensus 528 G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 607 (734)
|++++|..|...+........++|+.+++++++++..+|++||+|+|+|+||++++.++.++|++|+++|+.+|..+..
T Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~~- 301 (380)
T 3doh_A 223 PNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDVS- 301 (380)
T ss_dssp TTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG-
T ss_pred CCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCChh-
Confidence 9999998888755544556678999999999998877999999999999999999999999999999999999875210
Q ss_pred ccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCcc-CCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCC
Q psy4818 608 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 686 (734)
Q Consensus 608 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~-~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~ 686 (734)
.+.. +. .| +||+||+.|..||+.++.+++++|++.
T Consensus 302 ---------------------------------~~~~----~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~------ 337 (380)
T 3doh_A 302 ---------------------------------KVER----IKDIP-IWVFHAEDDPVVPVENSRVLVKKLAEI------ 337 (380)
T ss_dssp ---------------------------------GGGG----GTTSC-EEEEEETTCSSSCTHHHHHHHHHHHHT------
T ss_pred ---------------------------------hhhh----ccCCC-EEEEecCCCCccCHHHHHHHHHHHHHC------
Confidence 0011 22 34 999999999999999999999999998
Q ss_pred CCCcEEEEEeCCC---CCCCCCchHHhHHHHH--HHHHHHHHH
Q psy4818 687 QKNPLLLRVEQDA---GHGQGTPLMKSIEEMT--DIYVFLMKS 724 (734)
Q Consensus 687 ~~~~~~~~~~~~~---gH~~~~~~~~~~~~~~--~~~~fl~~~ 724 (734)
|.++++++++++ +|++..... ....+. .+++||.++
T Consensus 338 -g~~~~~~~~~~~~h~~h~~~~H~~-~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 338 -GGKVRYTEYEKGFMEKHGWDPHGS-WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp -TCCEEEEEECTTHHHHTTCCTTCT-HHHHHTCHHHHHHHHTC
T ss_pred -CCceEEEEecCCcccCCCCCCchh-HHHhcCCHHHHHHHHhh
Confidence 889999999999 444332211 133444 788999864
No 24
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.89 E-value=6.2e-23 Score=213.29 Aligned_cols=237 Identities=17% Similarity=0.116 Sum_probs=170.2
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+..+.+++++.||..|+++++.|.+ ++.|+||++|||... .....+...+..++.+.||+|+.+|||+++++.
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 356788999999999999999999975 578999999997432 333344444445554569999999999977643
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchhc
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDML 606 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~ 606 (734)
....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.+.++ .++++++.+|++|..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 123478999999999886 34789999999999999999999886554 489999999999875
Q ss_pred cccccccCcccccccC-CC-CCHHHH----HHHH-------hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHH
Q psy4818 607 RFNKFTIAYYSESEFG-SP-NNKTHF----HNLL-------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKF 673 (734)
Q Consensus 607 ~~~~~~~~~~~~~~~g-~~-~~~~~~----~~~~-------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~ 673 (734)
..... .++. .+ ...... ..+. ..+|...... ...||+||+||+.|..++ ++..+
T Consensus 201 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l----~~lpP~li~~G~~D~~~~--~~~~~ 267 (317)
T 3qh4_A 201 PTASR-------SEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQL----AGLPATLITCGEIDPFRD--EVLDY 267 (317)
T ss_dssp CCHHH-------HHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCC----TTCCCEEEEEEEESTTHH--HHHHH
T ss_pred CCcCH-------HHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCccccc----CCCCceeEEecCcCCCch--hHHHH
Confidence 11100 0010 00 111111 1111 1233322221 345679999999998765 88999
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC---chHHhHHHHHHHHHHHHHHcC
Q psy4818 674 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT---PLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 674 ~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+++|++. |+++++++|++++|+|.. ......+....+.+||.++|+
T Consensus 268 a~~l~~~-------g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 268 AQRLLGA-------GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHT-------TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHc-------CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 9999998 999999999999999642 112235778889999999885
No 25
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.88 E-value=5.2e-22 Score=224.14 Aligned_cols=259 Identities=12% Similarity=0.042 Sum_probs=178.2
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc----CC-ccccHHHH---HHHHhcCeEEEEEe
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS----VL-PTFSISRC---MFLRHFNGIYAIPN 525 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~----~~-~~~~~~~~---~~l~~~G~~v~~~~ 525 (734)
...+..+.+.+++.||.+|.++++.|++. ++.|+||++||..... .. ..|...+. ++|+++||+|+.+|
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~~---~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKGA---KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCCC---CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 34667888999999999999999999863 5789999998643221 11 11211121 56777899999999
Q ss_pred cccCCCCCchhhhccc-----cccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 526 IRGGGELGEDWHNAGR-----LLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 526 ~rG~~~~g~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
+||+|+++..+..... ..++....+|+.++++||.++ .+.| .||+++|+||||+++++++.++|+.++|+|+.
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~ 175 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPE 175 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEec
Confidence 9999888766544311 122237789999999999998 7777 59999999999999999998889999999999
Q ss_pred CCcchhcc-ccccccCc------ccccccC----CC--------C----------------------CH--H-------H
Q psy4818 600 VGALDMLR-FNKFTIAY------YSESEFG----SP--------N----------------------NK--T-------H 629 (734)
Q Consensus 600 ~~~~d~~~-~~~~~~~~------~~~~~~g----~~--------~----------------------~~--~-------~ 629 (734)
+|+.|+.. ......+. .|...++ .+ + .+ + .
T Consensus 176 ~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 255 (615)
T 1mpx_A 176 SPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAY 255 (615)
T ss_dssp SCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSS
T ss_pred CCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCc
Confidence 99999543 10000000 0100000 00 0 00 0 0
Q ss_pred HHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC---cEEEEEeCCCCCCCCC-
Q psy4818 630 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN---PLLLRVEQDAGHGQGT- 705 (734)
Q Consensus 630 ~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~---~~~~~~~~~~gH~~~~- 705 (734)
-+++++.||+.++.+. .+++| +|++||.+|.+ ++.++.+++++|++. |. +..+++.|. +|+...
T Consensus 256 d~~w~~~Sp~~~~~~~--~I~~P-~Lii~G~~D~~-~~~~~~~~~~aL~~~-------g~p~~~~~lvigp~-~H~~~~~ 323 (615)
T 1mpx_A 256 DAFWQEQALDKVMART--PLKVP-TMWLQGLWDQE-DMWGAIHSYAAMEPR-------DKRNTLNYLVMGPW-RHSQVNY 323 (615)
T ss_dssp CHHHHTTCHHHHHHTS--CCCSC-EEEEEETTCSS-CSSHHHHHHHHHGGG-------CTTSSSEEEEEESC-CTTGGGS
T ss_pred ChhhhhcChhhhhhcc--CCCCC-EEEeecccCcc-ccccHHHHHHHHHhh-------cCCCcCCEEEECCC-CCCCccc
Confidence 0234566776554320 16667 99999999998 889999999999988 54 488999888 697511
Q ss_pred -----------chHHhHHHHHHHHHHHHHHcCCC
Q psy4818 706 -----------PLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 706 -----------~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
...........+++||+++|+..
T Consensus 324 ~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 324 DGSALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp CCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 01111222566899999999865
No 26
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.88 E-value=2.2e-22 Score=209.07 Aligned_cols=243 Identities=17% Similarity=0.088 Sum_probs=169.2
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+..+.+.+++.||..|+++++.|++ .++.|+||++||+.+. ... +. ... .++++||.|+++|+||.|+.+
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~~--~~-~~~-~l~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDGE--IH-EMV-NWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGGG--HH-HHH-HHHHTTCEEEEECCTTTSSSC
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCCCC--cc-ccc-chhhCCcEEEEecCCCCCCCC
Confidence 455788999999899999999999986 4678999999998765 322 22 223 445579999999999988776
Q ss_pred chhhhccccc-----cC---------CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 534 EDWHNAGRLL-----KK---------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 534 ~~~~~~~~~~-----~~---------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
..+...+... .+ ...++|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEec
Confidence 5432211000 00 1347899999999999887899999999999999999999999887 4677778
Q ss_pred CCcch-hccccccccCccc------ccccCCCC-CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHH
Q psy4818 600 VGALD-MLRFNKFTIAYYS------ESEFGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 671 (734)
Q Consensus 600 ~~~~d-~~~~~~~~~~~~~------~~~~g~~~-~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~ 671 (734)
+|+++ +...........| ...++.+. ..+.+..+..+++...+.. ++.| +||++|++|..|++.++.
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~li~~g~~D~~~~~~~~~ 278 (318)
T 1l7a_A 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR----VKVP-VLMSIGLIDKVTPPSTVF 278 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGG----CCSC-EEEEEETTCSSSCHHHHH
T ss_pred CCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhh----CCCC-EEEEeccCCCCCCcccHH
Confidence 88643 2221111100011 01111111 1122333444555555554 5666 999999999999999988
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 672 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 672 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+++++|. .++++++++++||... .+....+.+||.++|+
T Consensus 279 ~~~~~l~----------~~~~~~~~~~~~H~~~------~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 279 AAYNHLE----------TKKELKVYRYFGHEYI------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp HHHHHCC----------SSEEEEEETTCCSSCC------HHHHHHHHHHHHHHHC
T ss_pred HHHhhcC----------CCeeEEEccCCCCCCc------chhHHHHHHHHHHHhC
Confidence 8887663 3478999999999942 2456778999999886
No 27
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.88 E-value=4.1e-22 Score=207.57 Aligned_cols=240 Identities=19% Similarity=0.089 Sum_probs=163.1
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+..+.+.+ ..|+++++.|++ .++.|+||++|||...... ..+......+..+.||+|+.+|||++++..
T Consensus 55 ~~~~~~~~~~-----~~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 126 (322)
T 3fak_A 55 DDIQVEQVTV-----AGCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP 126 (322)
T ss_dssp TTCEEEEEEE-----TTEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CCeeEEEEee-----CCeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC
Confidence 3445555554 238999999976 3578999999998543322 223333334444469999999999977543
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchhcccc
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFN 609 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~ 609 (734)
....++|+.++++||.++ .+|++||+|+|+|+||++++.++.+.|+. ++++|+.+|++|+....
T Consensus 127 -----------~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3fak_A 127 -----------FPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN 194 (322)
T ss_dssp -----------TTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC
T ss_pred -----------CCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC
Confidence 223478999999999988 57999999999999999999998876653 89999999999875432
Q ss_pred ccccCcccccccCCCCCHH-HHHHH--------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 610 KFTIAYYSESEFGSPNNKT-HFHNL--------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 610 ~~~~~~~~~~~~g~~~~~~-~~~~~--------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
...........+-...... ....+ ...+|+.... ...||+||+||+.|.. ..++.+++++|+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~~~pP~li~~g~~D~~--~~~~~~~~~~l~~~ 267 (322)
T 3fak_A 195 DSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANL-----KGLPPLLIHVGRDEVL--LDDSIKLDAKAKAD 267 (322)
T ss_dssp THHHHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCC-----TTCCCEEEEEETTSTT--HHHHHHHHHHHHHT
T ss_pred cCHHHhCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccc-----cCCChHhEEEcCcCcc--HHHHHHHHHHHHHc
Confidence 1000000000000000000 00111 1234553221 3456799999999976 46899999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcCCC
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|+++++++|++++|++... .....+...++.+||.++|+..
T Consensus 268 -------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 268 -------GVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp -------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred -------CCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999987531 1223577888999999999654
No 28
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.88 E-value=2.4e-22 Score=205.45 Aligned_cols=234 Identities=16% Similarity=0.038 Sum_probs=165.9
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccc---cCCCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGA---LRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~---~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+.+.+.+.+|..+.+.+| |+.. ..+++.|+||++|||...... ..|. .++..|+++||.|+++|+||.++.+
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAE-SLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHH-HHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccH-HHHHHHHhCCcEEEEEeccCCCccc
Confidence 45667788888888888888 7652 135678999999997532222 2233 3456677789999999999976642
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCCc-------------eeEEE
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL-------------YGAAL 597 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~-------------~~a~v 597 (734)
. ......+|+.+++++|.+.. .+|+++++|+|+|+||++++.++.++|+. ++++|
T Consensus 96 ~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v 166 (283)
T 3bjr_A 96 P---------LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVV 166 (283)
T ss_dssp S---------CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEE
T ss_pred c---------CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEE
Confidence 0 11234678999999998753 37888999999999999999999999987 89999
Q ss_pred EcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHH
Q psy4818 598 ILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL 677 (734)
Q Consensus 598 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L 677 (734)
+.+|+.++........ ..+...++ .+...+|...+.. +..| +||++|++|..||+.++.+++++|
T Consensus 167 ~~~p~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~p~~~~~~~~~~l 231 (283)
T 3bjr_A 167 LGYPVISPLLGFPKDD-ATLATWTP---------TPNELAADQHVNS----DNQP-TFIWTTADDPIVPATNTLAYATAL 231 (283)
T ss_dssp EESCCCCTTSBC---------CCCC---------CGGGGCGGGSCCT----TCCC-EEEEEESCCTTSCTHHHHHHHHHH
T ss_pred EcCCcccccccccccc-chHHHHHH---------HhHhcCHHHhccC----CCCC-EEEEEcCCCCCCChHHHHHHHHHH
Confidence 9999887543211100 00100011 1234566666554 5666 999999999999999999999999
Q ss_pred HhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-----------HhHHHHHHHHHHHHHH
Q psy4818 678 QEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-----------KSIEEMTDIYVFLMKS 724 (734)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~ 724 (734)
++. +.++++++++++||++..... ...++...+.+||.++
T Consensus 232 ~~~-------g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 232 ATA-------KIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHT-------TCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHC-------CCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 988 889999999999997653221 1135667788898753
No 29
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.88 E-value=7e-22 Score=223.72 Aligned_cols=258 Identities=14% Similarity=0.024 Sum_probs=177.7
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-----cCC-ccccHHH--H-HHHHhcCeEEEEEe
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-----SVL-PTFSISR--C-MFLRHFNGIYAIPN 525 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-----~~~-~~~~~~~--~-~~l~~~G~~v~~~~ 525 (734)
..+..+.+.+++.||.+|.++++.|++. ++.|+||+.||.... ... ..|...+ . ++|+++||+|+.+|
T Consensus 33 ~~~~~~~v~i~~~DG~~L~~~l~~P~~~---~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D 109 (652)
T 2b9v_A 33 RDYIKREVMVPMRDGVKLYTVIVIPKNA---RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQD 109 (652)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEEECCCCcEEEEEEEecCCC---CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEe
Confidence 3467788999999999999999999863 578999998853211 111 0111111 1 56677899999999
Q ss_pred cccCCCCCchhhhcc-----ccccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 526 IRGGGELGEDWHNAG-----RLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 526 ~rG~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
+||+|+++..|.... ...++....+|+.++++||.++ ++.| .||+++|+||||+++++++.++|+.|+|+|+.
T Consensus 110 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~ 188 (652)
T 2b9v_A 110 IRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 188 (652)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEec
Confidence 999998887765432 1112236789999999999999 8887 59999999999999999999889999999999
Q ss_pred CCcchhcc-ccccccCc------cccccc----CC----C----C----------------------CH---------HH
Q psy4818 600 VGALDMLR-FNKFTIAY------YSESEF----GS----P----N----------------------NK---------TH 629 (734)
Q Consensus 600 ~~~~d~~~-~~~~~~~~------~~~~~~----g~----~----~----------------------~~---------~~ 629 (734)
+|+.|+.. ......+. .|...+ .. + . .+ ..
T Consensus 189 ~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (652)
T 2b9v_A 189 SPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAY 268 (652)
T ss_dssp EECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSS
T ss_pred ccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCC
Confidence 99999753 11000000 010000 00 0 0 00 00
Q ss_pred HHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC--CcEEEEEeCCCCCCCCC--
Q psy4818 630 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK--NPLLLRVEQDAGHGQGT-- 705 (734)
Q Consensus 630 ~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~gH~~~~-- 705 (734)
-+++++.||+.++.+- .+++| +|++||.+|.+ +..++.+++++|++. + ++..+++.|. +|+...
T Consensus 269 d~yw~~~Sp~~~~~~~--~I~~P-vLiv~G~~D~~-~~~~~~~~~~aL~~~-------g~~~~~~lvigp~-~H~~~~~~ 336 (652)
T 2b9v_A 269 DAFWQGQALDKILAQR--KPTVP-MLWEQGLWDQE-DMWGAIHAWQALKDA-------DVKAPNTLVMGPW-RHSGVNYN 336 (652)
T ss_dssp SHHHHTTCHHHHHHHH--CCCSC-EEEEEETTCSS-CSSHHHHHHHHHHHT-------TCSSCEEEEEESC-CTTGGGSC
T ss_pred ChHHhcCChhhhhhcC--CCCCC-EEEEeecCCcc-ccccHHHHHHHHHhc-------CCCCCCEEEECCC-CCCCcccc
Confidence 0224556776544310 05667 99999999998 778999999999998 7 8899999886 797521
Q ss_pred ---c-------hHHhHHHHHHHHHHHHHHcCCC
Q psy4818 706 ---P-------LMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 706 ---~-------~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
. ..........+++||+++|+..
T Consensus 337 ~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 337 GSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp CSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccCCccccccccchhhhhhHHHHHHHHHhCCC
Confidence 0 1111223566899999999865
No 30
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=3.3e-21 Score=203.56 Aligned_cols=237 Identities=16% Similarity=0.085 Sum_probs=164.7
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEecccc--------------CCCCCcEEEEecCCCCCcCCc---cccHHHHHHHH-h
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGAL--------------RNRRNPVIIYGYGGYGVSVLP---TFSISRCMFLR-H 516 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~--------------~~~~~P~vv~~hGg~~~~~~~---~~~~~~~~~l~-~ 516 (734)
..+..+.+.+.+ +..+++.++.|++.. ..++.|+||++|||....... .|.. +...|+ +
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~-~~~~la~~ 144 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDT-LCRRLVGL 144 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHH-HHHHHHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHH-HHHHHHHH
Confidence 345677888865 556899999998642 246789999999975433221 1433 334555 6
Q ss_pred cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC----CCCCC-cEEEEEcChHHHHHHHHHhcCCC
Q psy4818 517 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK----YTKPK-YITIMGGSNGGLLVGACLNQRPE 591 (734)
Q Consensus 517 ~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~~~~~~~~~p~ 591 (734)
+||+|+.+||||+++.. ....++|+.++++||.++. .+|++ |++|+|+|+||++++.++.++|+
T Consensus 145 ~g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~ 213 (351)
T 2zsh_A 145 CKCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE 213 (351)
T ss_dssp HTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHT
T ss_pred cCCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhc
Confidence 79999999999977643 1235789999999998764 47999 99999999999999999998888
Q ss_pred ---ceeEEEEcCCcchhccccccccCcccccccCCCC-CHHHHHH-HHh------------CCcc----CCCCCCCCCcc
Q psy4818 592 ---LYGAALILVGALDMLRFNKFTIAYYSESEFGSPN-NKTHFHN-LLS------------YSPL----HNIKVPPNNTQ 650 (734)
Q Consensus 592 ---~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~-~~~~~~~-~~~------------~sp~----~~~~~p~~~~~ 650 (734)
.++++|+.+|+++....... .....+.+. ....... +.. .+|+ .++.. +.
T Consensus 214 ~~~~v~~~vl~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~ 284 (351)
T 2zsh_A 214 SGIDVLGNILLNPMFGGNERTES-----EKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEG----VS 284 (351)
T ss_dssp TTCCCCEEEEESCCCCCSSCCHH-----HHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTT----CC
T ss_pred cCCCeeEEEEECCccCCCcCChh-----hhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhh----CC
Confidence 89999999998875432110 000011110 1111111 111 1222 12222 46
Q ss_pred CCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc--hHHhHHHHHHHHHHHHH
Q psy4818 651 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP--LMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 651 ~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 723 (734)
+||+||++|++|..++ ++.+++++|++. +.++++++++++||++... .....+....+.+||.+
T Consensus 285 ~pP~Lii~G~~D~~~~--~~~~~~~~l~~~-------g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 285 FPKSLVVVAGLDLIRD--WQLAYAEGLKKA-------GQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CCEEEEEEETTSTTHH--HHHHHHHHHHHT-------TCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCcchH--HHHHHHHHHHHc-------CCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 7679999999999875 778899999988 8899999999999988651 12235677788899864
No 31
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.87 E-value=3e-22 Score=204.44 Aligned_cols=246 Identities=15% Similarity=0.110 Sum_probs=162.0
Q ss_pred eEEEEEEEc-CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCC------
Q psy4818 458 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG------ 530 (734)
Q Consensus 458 ~~~~~~~~s-~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~------ 530 (734)
..+++.+.+ .+|.++++.++.|+++.+.+++|+||++||+.+....+........+++++|++|+++|.++.|
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~ 93 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNE 93 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccc
Confidence 455666665 4788999999999987667889999999998655432211111345666779999999976533
Q ss_pred -----CCCchhhhccccc--cCCCchhH-HHH-HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 531 -----ELGEDWHNAGRLL--KKQNCFDD-FQA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 531 -----~~g~~~~~~~~~~--~~~~~~~D-~~~-~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
+.|..|+...... .....+.+ +.. ++.++.+. +..++|++|+|+|+||++++.++.++|++|+++++.+|
T Consensus 94 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 172 (280)
T 3ls2_A 94 DSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQH-FPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSP 172 (280)
T ss_dssp SCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHH-SSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESC
T ss_pred cccccccCCccccccccccccccccHHHHHHHHHHHHHHhh-CCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecC
Confidence 2233333322111 01112233 222 33444333 33358999999999999999999999999999999999
Q ss_pred cchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCcc---CCcEEEEecCCCCCCCChH-HHHHHHHH
Q psy4818 602 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ---YPATLVLTGDHDDRVPPLH-SYKFIATL 677 (734)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~---~P~~Li~~g~~D~~v~~~~-~~~~~~~L 677 (734)
++++....... ..+...+|.. .+ .+..++|...+.. .. .+|+||+||+.|..|+... +.+++++|
T Consensus 173 ~~~~~~~~~~~--~~~~~~~g~~--~~---~~~~~~~~~~~~~----~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l 241 (280)
T 3ls2_A 173 IVNPINCPWGV--KAFTGYLGAD--KT---TWAQYDSCKLMAK----AEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVA 241 (280)
T ss_dssp CSCGGGSHHHH--HHHHHHHCSC--GG---GTGGGCHHHHHHT----CCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHH
T ss_pred ccCcccCcchh--hHHHhhcCch--HH---HHHhcCHHHHHHh----ccccCCCcEEEEEeCCCcccCCchhHHHHHHHH
Confidence 88764321000 0001112321 11 1224445443333 21 2349999999999999854 89999999
Q ss_pred HhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 678 QEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
++. |.+++++++|+++|.+.. ......+.++|+.++|.
T Consensus 242 ~~~-------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 242 KQK-------DYPLTLEMQTGYDHSYFF----ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHH-------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHh-------CCCceEEEeCCCCCchhh----HHHHHHHHHHHHHHHhc
Confidence 999 999999999999998732 23556678899999875
No 32
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.87 E-value=8.1e-21 Score=205.70 Aligned_cols=223 Identities=17% Similarity=0.093 Sum_probs=158.4
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchh
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 550 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~ 550 (734)
.+.+.++.|++ .++.|+||++||+.+.... ..+..|+++||+|+++|+||.++.... .....++
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~~~~-----~~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~~~~~~ 207 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGGLLE-----YRASLLAGHGFATLALAYYNFEDLPNN--------MDNISLE 207 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCSCCC-----HHHHHHHTTTCEEEEEECSSSTTSCSS--------CSCEETH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcchhH-----HHHHHHHhCCCEEEEEccCCCCCCCCC--------cccCCHH
Confidence 58999999986 4678999999998654221 235778888999999999997655422 2224588
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----ccccCc-----------
Q psy4818 551 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----KFTIAY----------- 615 (734)
Q Consensus 551 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~~~~~~----------- 615 (734)
|+.+++++|.++..+++++|+|+|+|+||++++.++.++|+ ++++|+.+|........ ......
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVA 286 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccC
Confidence 99999999999888899999999999999999999999998 79999988876322110 000000
Q ss_pred -----ccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHH-HHHHHHHHhhhCCCCCCCC
Q psy4818 616 -----YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 616 -----~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~-~~~~~~L~~~~~~~~~~~~ 689 (734)
.+...+..+... ...+....+.. ++.| +|++||++|..+|..+. ..+.++|++. ++
T Consensus 287 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----i~~P-~Lii~G~~D~~vp~~~~~~~~~~~l~~~-------g~ 348 (422)
T 3k2i_A 287 FSGLVDIVDIRNALVGG------YKNPSMIPIEK----AQGP-ILLIVGQDDHNWRSELYAQTVSERLQAH-------GK 348 (422)
T ss_dssp TTSCEECTTCBCCCTTG------GGSTTBCCGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHHHHHT-------TC
T ss_pred cchhHHHHHHHhhhhhc------ccccccccHHH----CCCC-EEEEEeCCCCCCCHHHHHHHHHHHHHhc-------CC
Confidence 000011111110 01112222332 5666 99999999999999866 5888899988 77
Q ss_pred c-EEEEEeCCCCCCCCCc--------------------------hHHhHHHHHHHHHHHHHHcCCC
Q psy4818 690 P-LLLRVEQDAGHGQGTP--------------------------LMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 690 ~-~~~~~~~~~gH~~~~~--------------------------~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+ +++++|+++||.+..+ .....+.+.++++||.++|+..
T Consensus 349 ~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 349 EKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp CCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 7 8999999999998321 1224678889999999999754
No 33
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.87 E-value=3e-21 Score=200.19 Aligned_cols=240 Identities=15% Similarity=0.106 Sum_probs=167.7
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHHh-cCeEEEEEecccCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRH-FNGIYAIPNIRGGGEL 532 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~ 532 (734)
.....+.+.+++.+| +|++.++.|++. .++.|+||++|||.... ....|.. +...|++ .||.|+.+|+||.+++
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~~~~ 119 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDP-VCRVLAKDGRAVVFSVDYRLAPEH 119 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHH-HHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHH-HHHHHHHhcCCEEEEeCCCCCCCC
Confidence 455788999998888 899999999863 45789999999975332 2333443 4455555 4999999999997764
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchh
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDM 605 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~ 605 (734)
+ .....+|+.++++||.++. .+|+++++|+|+|+||++++.++.++|+ .++++|+.+|+.++
T Consensus 120 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 120 K-----------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 3 1224689999999998864 3688999999999999999999987776 68999999998876
Q ss_pred ccccccccCcccccccC-CC-CCHHHHHHH-------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHH
Q psy4818 606 LRFNKFTIAYYSESEFG-SP-NNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 670 (734)
Q Consensus 606 ~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~-------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~ 670 (734)
...... ..+ ..+. .+ ........+ ...+|+..... ...||+||++|++|..+ .++
T Consensus 189 ~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l----~~~~P~lii~G~~D~~~--~~~ 258 (310)
T 2hm7_A 189 DPAHPP---ASI-EENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDL----SGLPPAYIATAQYDPLR--DVG 258 (310)
T ss_dssp CTTSCC---HHH-HHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCC----TTCCCEEEEEEEECTTH--HHH
T ss_pred CcccCC---cch-hhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccc----cCCCCEEEEEecCCCch--HHH
Confidence 511100 000 0000 00 011111110 02244432221 23346999999999987 688
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcC
Q psy4818 671 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 671 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 726 (734)
..++++|++. |.+++++++++++|++... .....+....+.+||.++|+
T Consensus 259 ~~~~~~l~~~-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 259 KLYAEALNKA-------GVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHHHHHT-------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC-------CCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 9999999998 8899999999999987531 12235677789999998874
No 34
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.87 E-value=4.9e-22 Score=202.78 Aligned_cols=246 Identities=15% Similarity=0.066 Sum_probs=163.0
Q ss_pred eEEEEEEEc-CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCC-----
Q psy4818 458 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE----- 531 (734)
Q Consensus 458 ~~~~~~~~s-~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~----- 531 (734)
..+++.+.+ .+|..+++.++.|+++...++.|+||++||+.+....+........+++++|++|+++|.|+.|.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~ 95 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADD 95 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCC
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcc
Confidence 456666655 57889999999999876678899999999986654322111113456677799999999876432
Q ss_pred ------CCchhhhccccc-c-CCCchhHH-H-HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 532 ------LGEDWHNAGRLL-K-KQNCFDDF-Q-AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 532 ------~g~~~~~~~~~~-~-~~~~~~D~-~-~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.|..|+...... + ....+.+. . ..+.++.+...+ ++|++|+|+|+||++++.++.++|++|+++|+.+|
T Consensus 96 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (280)
T 3i6y_A 96 EGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSP 174 (280)
T ss_dssp SSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESC
T ss_pred cccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCC
Confidence 122222221110 0 11122332 2 344455444333 78999999999999999999999999999999999
Q ss_pred cchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCcc-CCcEEEEecCCCCCCCChH-HHHHHHHHHh
Q psy4818 602 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLH-SYKFIATLQE 679 (734)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~-~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~ 679 (734)
++++...... ...+...+|.. .+ .+...+|...+.. .+ .+|+||+||+.|..|+..+ +.+++++|++
T Consensus 175 ~~~~~~~~~~--~~~~~~~~~~~--~~---~~~~~~~~~~~~~----~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3i6y_A 175 INNPVNCPWG--QKAFTAYLGKD--TD---TWREYDASLLMRA----AKQYVPALVDQGEADNFLAEQLKPEVLEAAASS 243 (280)
T ss_dssp CCCGGGSHHH--HHHHHHHHCSC--GG---GTGGGCHHHHHHH----CSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHH
T ss_pred ccccccCchH--HHHHHHhcCCc--hH---HHHhcCHHHHHHh----cCCCccEEEEEeCCCccccchhhHHHHHHHHHH
Confidence 8875432100 00011112221 11 1224455444433 22 2349999999999998755 8999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
. |.+++++++|+++|.+. ...+...+.++|+.++|+
T Consensus 244 ~-------g~~~~~~~~~g~~H~~~----~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 244 N-------NYPLELRSHEGYDHSYY----FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp T-------TCCEEEEEETTCCSSHH----HHHHHHHHHHHHHHHHHT
T ss_pred c-------CCCceEEEeCCCCccHH----HHHHhHHHHHHHHHhhcc
Confidence 8 99999999999999873 224566778999999885
No 35
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.87 E-value=3.5e-21 Score=200.47 Aligned_cols=237 Identities=14% Similarity=0.116 Sum_probs=167.6
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHh-cCeEEEEEecccCCC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRH-FNGIYAIPNIRGGGE 531 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~ 531 (734)
+..+..+.+.+++.+| .|++.+|.|++ .++.|+||++|||... .....|... ...|++ .||.|+.+||||.++
T Consensus 60 ~~~~~~~~~~i~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~-~~~La~~~g~~Vv~~Dyrg~~~ 134 (323)
T 3ain_A 60 EEVGKIEDITIPGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPL-CRAITNSCQCVTISVDYRLAPE 134 (323)
T ss_dssp CCCSEEEEEEEECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHH-HHHHHHHHTSEEEEECCCCTTT
T ss_pred CCccEEEEEEecCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHH-HHHHHHhcCCEEEEecCCCCCC
Confidence 3456789999998887 89999999976 4678999999997532 233344443 344553 499999999999776
Q ss_pred CCchhhhccccccCCCchhHHHHHHHHHHHcCC-C-CCCcEEEEEcChHHHHHHHHHhcCCCce---eEEEEcCCcchhc
Q psy4818 532 LGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY-T-KPKYITIMGGSNGGLLVGACLNQRPELY---GAALILVGALDML 606 (734)
Q Consensus 532 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~-d~~ri~i~G~S~GG~~~~~~~~~~p~~~---~a~v~~~~~~d~~ 606 (734)
.. ....++|+.++++|+.++.. . |++||+|+|+|+||++++.++.++|+.. +++|+.+|+++..
T Consensus 135 ~~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~ 203 (323)
T 3ain_A 135 NK-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFD 203 (323)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCC
T ss_pred CC-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCC
Confidence 42 12347899999999987631 1 8899999999999999999998887765 8999999988754
Q ss_pred cccccccCccccccc--CCCCCHHHHHHH-------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHH
Q psy4818 607 RFNKFTIAYYSESEF--GSPNNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 671 (734)
Q Consensus 607 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~-------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~ 671 (734)
..... + .++ +.....+....+ ...+|+.. .. ...||+||++|++|..+ .++.
T Consensus 204 ~~~~~-----~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l----~~l~P~lii~G~~D~l~--~~~~ 270 (323)
T 3ain_A 204 LITKS-----L-YDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILA-DL----NDLPPALIITAEHDPLR--DQGE 270 (323)
T ss_dssp SCCHH-----H-HHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGS-CC----TTCCCEEEEEETTCTTH--HHHH
T ss_pred CCCcc-----H-HHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccC-cc----cCCCHHHEEECCCCccH--HHHH
Confidence 22100 0 000 000011111100 12345443 21 23456999999999887 5889
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcC
Q psy4818 672 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 672 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 726 (734)
.++++|++. |++++++++++++|++... .....+....+.+||.++|+
T Consensus 271 ~~a~~l~~a-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 271 AYANKLLQS-------GVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHHHT-------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-------CCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 999999998 8999999999999998641 12235677788999998875
No 36
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.87 E-value=3.1e-21 Score=201.31 Aligned_cols=241 Identities=16% Similarity=0.086 Sum_probs=168.3
Q ss_pred CCceEEEEEEEcCCCc-EEeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 455 TLFQTKQVYFRSKDGT-RVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~-~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
..+..+.+.+++.||. .|++.++.|++. .++.|+||++|||.... ....|......+..+.||.|+.+||||.++.
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~ 124 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET 124 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC--CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCC
Confidence 4567899999999997 899999999752 46789999999986322 2223443333444435999999999997764
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchh
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDM 605 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~ 605 (734)
. .....+|+.++++||.+. ..+|++||+|+|+|+||++++.++.++|+ .++++|+.+|+++.
T Consensus 125 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 125 T-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred C-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 2 123467999999999874 23688999999999999999999887665 48999999999876
Q ss_pred ccccccccCcccccccC-C-CCCHHHH----HHHH--------------hCCccCCCCCCCCCccCCcEEEEecCCCCCC
Q psy4818 606 LRFNKFTIAYYSESEFG-S-PNNKTHF----HNLL--------------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRV 665 (734)
Q Consensus 606 ~~~~~~~~~~~~~~~~g-~-~~~~~~~----~~~~--------------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v 665 (734)
...... + .++. . ....... ..+. ..+|+..... ...||+||++|++|..+
T Consensus 194 ~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----~~~~P~li~~G~~D~~~ 263 (323)
T 1lzl_A 194 RLETVS-----M-TNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDL----TGLPPTYLSTMELDPLR 263 (323)
T ss_dssp TCCSHH-----H-HHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCC----TTCCCEEEEEETTCTTH
T ss_pred CcCchh-----H-HHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCccc----CCCChhheEECCcCCch
Confidence 532110 0 0000 0 0011100 1111 1233332121 23356999999999987
Q ss_pred CChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc--hHHhHHHHHHHHHHHHHHcCC
Q psy4818 666 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP--LMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 666 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~~l~~ 727 (734)
.++.+++++|++. |.+++++++++++|++... .....+....+.+||.++++.
T Consensus 264 --~~~~~~~~~l~~~-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 264 --DEGIEYALRLLQA-------GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp --HHHHHHHHHHHHT-------TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHHc-------CCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 6889999999998 8999999999999987421 122356778899999999864
No 37
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.87 E-value=2.7e-22 Score=204.78 Aligned_cols=247 Identities=17% Similarity=0.136 Sum_probs=157.8
Q ss_pred EEEEEEEc-CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--ccCCCCCch
Q psy4818 459 TKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELGED 535 (734)
Q Consensus 459 ~~~~~~~s-~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~~~~g~~ 535 (734)
.+.+.+.+ .+|..+++.++.|++.. .++.|+||++||+.+....+.....+..+++++||+|+++|+ ||.++.|..
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~ 94 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC----
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccccccc
Confidence 44455544 57889999999998753 368999999999866543221111124566778999999999 887765432
Q ss_pred ----------hhhccccc-c--CCCchhHHH-HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 536 ----------WHNAGRLL-K--KQNCFDDFQ-AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 536 ----------~~~~~~~~-~--~~~~~~D~~-~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
|+...... + .....+++. .+++++.++.-+|++||+|+|+|+||++++.++.++|++|+++|+.+|
T Consensus 95 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (282)
T 3fcx_A 95 ESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174 (282)
T ss_dssp ----CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESC
T ss_pred ccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCC
Confidence 22211100 0 001123333 344444434448899999999999999999999999999999999999
Q ss_pred cchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH--HHHHHHHHHh
Q psy4818 602 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH--SYKFIATLQE 679 (734)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~--~~~~~~~L~~ 679 (734)
+.+........ ..+...+|... ..+..++|...+.... +...| +||+||+.|..|+..+ +.+++++|++
T Consensus 175 ~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~p-~li~~G~~D~~v~~~~~~~~~~~~~l~~ 245 (282)
T 3fcx_A 175 ICNPVLCPWGK--KAFSGYLGTDQ-----SKWKAYDATHLVKSYP-GSQLD-ILIDQGKDDQFLLDGQLLPDNFIAACTE 245 (282)
T ss_dssp CCCGGGSHHHH--HHHHHHHC--------CCGGGGCHHHHHTTCC----CC-EEEEEETTCHHHHTTSSCHHHHHHHHHH
T ss_pred ccCcccCchhH--HHHHHhcCCch-----hhhhhcCHHHHHHhcc-cCCCc-EEEEcCCCCcccccchhhHHHHHHHHHH
Confidence 88754321000 00111122211 0112334433222210 03444 9999999999997665 6699999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
. |.+++++++++++|.+.. ......+.+.|+.++|.
T Consensus 246 ~-------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 246 K-------KIPVVFRLQEDYDHSYYF----IATFITDHIRHHAKYLN 281 (282)
T ss_dssp T-------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHTT
T ss_pred c-------CCceEEEECCCCCcCHHH----HHhhhHHHHHHHHHhhc
Confidence 8 899999999999998742 23455667899998875
No 38
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.86 E-value=2.3e-20 Score=186.82 Aligned_cols=212 Identities=16% Similarity=0.116 Sum_probs=159.2
Q ss_pred eEE--EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC---CccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 458 QTK--QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV---LPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 458 ~~~--~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
..| ++.+++.+| +|.++++.|++ ++.|+||++||..+... ...| ..+...|+++||.|+++|+||.|..
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g~G~s 93 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIV-YQLFYLFQKRGFTTLRFNFRSIGRS 93 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHH-HHHHHHHHHTTCEEEEECCTTSTTC
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHH-HHHHHHHHHCCCEEEEECCCCCCCC
Confidence 455 899999888 89999888754 56799999999643221 1122 2355667778999999999996644
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 612 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 612 (734)
...+. .....++|+.+++++|.+++ .++++++++|+|+||++++.++.++|+ ++++|+.+|..+...
T Consensus 94 ~~~~~------~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~----- 160 (249)
T 2i3d_A 94 QGEFD------HGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD----- 160 (249)
T ss_dssp CSCCC------SSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-----
T ss_pred CCCCC------CccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-----
Confidence 32211 12234589999999998875 478899999999999999999999998 899999998775321
Q ss_pred cCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 613 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 613 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
+..+.. ++.| +|+++|++|..+++.++.++++++... .+..++
T Consensus 161 --------------------------~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~------~~~~~~ 203 (249)
T 2i3d_A 161 --------------------------FSFLAP----CPSS-GLIINGDADKVAPEKDVNGLVEKLKTQ------KGILIT 203 (249)
T ss_dssp --------------------------CTTCTT----CCSC-EEEEEETTCSSSCHHHHHHHHHHHTTS------TTCCEE
T ss_pred --------------------------hhhhcc----cCCC-EEEEEcCCCCCCCHHHHHHHHHHHhhc------cCCcee
Confidence 011222 4556 999999999999999999999998752 166889
Q ss_pred EEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 693 LRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 693 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+++++++||.+.. . ..+....+.+||.+++...
T Consensus 204 ~~~~~g~~H~~~~-~--~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 204 HRTLPGANHFFNG-K--VDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp EEEETTCCTTCTT-C--HHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCccccc-C--HHHHHHHHHHHHHHhcCCC
Confidence 9999999999873 2 2466777899999998654
No 39
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.2e-20 Score=205.30 Aligned_cols=223 Identities=17% Similarity=0.148 Sum_probs=157.1
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchh
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 550 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~ 550 (734)
.+.++++.|++ .++.|+||++||+.+.... ..+.+|+++||+|+++|+||.++.+... ....++
T Consensus 160 ~l~~~l~~P~~---~~~~P~Vv~lhG~~~~~~~-----~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------~~~~~~ 223 (446)
T 3hlk_A 160 RVRGTLFLPPE---PGPFPGIVDMFGTGGGLLE-----YRASLLAGKGFAVMALAYYNYEDLPKTM--------ETLHLE 223 (446)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCSSCSCCC-----HHHHHHHTTTCEEEEECCSSSTTSCSCC--------SEEEHH
T ss_pred eEEEEEEeCCC---CCCCCEEEEECCCCcchhh-----HHHHHHHhCCCEEEEeccCCCCCCCcch--------hhCCHH
Confidence 59999999976 4678999999998654322 2357788889999999999976654221 223588
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----ccccC------------
Q psy4818 551 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----KFTIA------------ 614 (734)
Q Consensus 551 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~~~~~------------ 614 (734)
|+.+++++|.++..+|+++|+|+|+|+||++++.++.++|+ ++++|+.+|........ .....
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVT 302 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccc
Confidence 99999999999988899999999999999999999999998 79999888865322110 00000
Q ss_pred ----cccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHH-HHHHHHHHhhhCCCCCCCC
Q psy4818 615 ----YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 615 ----~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~-~~~~~~L~~~~~~~~~~~~ 689 (734)
..+...+..+..... .....+ +.. ++.| +||++|++|..+|+.+. ..++++|++. |.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~----i~~P-vLii~G~~D~~vp~~~~~~~~~~~l~~~-------g~ 364 (446)
T 3hlk_A 303 KDGYADIVDVLNSPLEGPD---QKSFIP---VER----AEST-FLFLVGQDDHNWKSEFYANEACKRLQAH-------GR 364 (446)
T ss_dssp SSSCEECTTCBCCTTSGGG---GGGBCC---GGG----CCSE-EEEEEETTCCSSCHHHHHHHHHHHHHHT-------TC
T ss_pred cchHHHHHHHHhchhhccc---cccccC---HHH----CCCC-EEEEEeCCCCCcChHHHHHHHHHHHHHc-------CC
Confidence 000011111111100 011112 222 5555 99999999999999655 6899999998 77
Q ss_pred c-EEEEEeCCCCCCCCC--------------------------chHHhHHHHHHHHHHHHHHcCCC
Q psy4818 690 P-LLLRVEQDAGHGQGT--------------------------PLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 690 ~-~~~~~~~~~gH~~~~--------------------------~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+ +++++|+++||.+.. ....+.+.+.++++||.++|+..
T Consensus 365 ~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 365 RKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp CCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8 899999999999831 11123578889999999999753
No 40
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.86 E-value=2.4e-21 Score=204.24 Aligned_cols=240 Identities=19% Similarity=0.190 Sum_probs=167.8
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+..+++.+.+.||.+|+++++.|++ .++.|+||++||+.+....+. . ...++ ++||.|+++|+||.|+.+.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~~~--~-~~~~~-~~G~~v~~~D~rG~g~s~~ 150 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSGDWN--D-KLNYV-AAGFTVVAMDVRGQGGQSQ 150 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSCCSG--G-GHHHH-TTTCEEEEECCTTSSSSCC
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCCChh--h-hhHHH-hCCcEEEEEcCCCCCCCCC
Confidence 456789999999999999999999986 467899999999876654433 2 23444 5699999999999886654
Q ss_pred hhhhc------cccccC----------CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEE
Q psy4818 535 DWHNA------GRLLKK----------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 598 (734)
Q Consensus 535 ~~~~~------~~~~~~----------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 598 (734)
..... +....+ ...++|+.++++++.....+|++||+|+|+|+||++++.++.++|+ ++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl 229 (346)
T 3fcy_A 151 DVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVS 229 (346)
T ss_dssp CCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEE
T ss_pred CCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEE
Confidence 32211 000000 0125899999999998888899999999999999999999999998 899999
Q ss_pred cCCcchh-ccccccccC-ccc--cc---ccCCC---CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCCh
Q psy4818 599 LVGALDM-LRFNKFTIA-YYS--ES---EFGSP---NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 668 (734)
Q Consensus 599 ~~~~~d~-~~~~~~~~~-~~~--~~---~~g~~---~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~ 668 (734)
.+|+++. ......... ..+ .. .+..| ...+.+..+..+++...+.. ++.| +|+++|+.|..|++.
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----i~~P-~lii~G~~D~~~~~~ 304 (346)
T 3fcy_A 230 EYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKR----IKGD-VLMCVGLMDQVCPPS 304 (346)
T ss_dssp ESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGG----CCSE-EEEEEETTCSSSCHH
T ss_pred CCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHh----cCCC-EEEEeeCCCCcCCHH
Confidence 9997542 211111100 000 00 01111 12233344444455444444 6666 999999999999998
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 669 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 669 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
++.++++++. .++++++++++||.+.. +....+.+||.+
T Consensus 305 ~~~~~~~~~~----------~~~~~~~~~~~gH~~~~------~~~~~i~~fl~~ 343 (346)
T 3fcy_A 305 TVFAAYNNIQ----------SKKDIKVYPDYGHEPMR------GFGDLAMQFMLE 343 (346)
T ss_dssp HHHHHHTTCC----------SSEEEEEETTCCSSCCT------THHHHHHHHHHT
T ss_pred HHHHHHHhcC----------CCcEEEEeCCCCCcCHH------HHHHHHHHHHHH
Confidence 8877776552 26789999999999872 334567889875
No 41
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.86 E-value=2.2e-21 Score=197.75 Aligned_cols=247 Identities=13% Similarity=0.063 Sum_probs=163.5
Q ss_pred eEEEEEEEc-CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc--
Q psy4818 458 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE-- 534 (734)
Q Consensus 458 ~~~~~~~~s-~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~-- 534 (734)
..+.+.+.+ .+|.++++.++.|++.. .++.|+||++||+.+....+.....+..++++.||+|+++|+||.|....
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~ 92 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDE 92 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccc
Confidence 455566644 57889999999998764 57899999999986654322111113456666799999999998654321
Q ss_pred ----------hhhhccccc--cCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 535 ----------DWHNAGRLL--KKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 535 ----------~~~~~~~~~--~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
.|+...... .....+.+++ .+++++.+...+|++|++|+|+|+||++++.++.++|++|+++|+.+
T Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 172 (278)
T 3e4d_A 93 LTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFA 172 (278)
T ss_dssp TTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEES
T ss_pred cccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeC
Confidence 111111000 0111233333 35666666655788999999999999999999999999999999999
Q ss_pred CcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHHHHHHh
Q psy4818 601 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQE 679 (734)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~ 679 (734)
|++++....... ..+...+|.. .+ .+..++|...+... ...||+||+||+.|..|+... +..++++|++
T Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~--~~---~~~~~~~~~~~~~~---~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 173 PIVAPSSADWSE--PALEKYLGAD--RA---AWRRYDACSLVEDG---ARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CCSCGGGCTTTH--HHHHHHHCSC--GG---GGGGGCHHHHHHTT---CCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred CcccccCCccch--hhHHHhcCCc--HH---HHHhcChhhHhhcC---CCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 988764321000 0011112321 11 12244454443331 223459999999999998532 7889999988
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
. |.+++++++++++|.+.. ..+...+++.|+.++|+
T Consensus 243 ~-------g~~~~~~~~~g~~H~~~~----~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 243 T-------DIGLTLRMHDRYDHSYYF----ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp S-------SCEEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred c-------CCCceEEEeCCCCcCHHH----HHHHHHHHHHHHHHhcC
Confidence 8 899999999999998632 23556678899998875
No 42
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.86 E-value=3.9e-21 Score=204.27 Aligned_cols=245 Identities=16% Similarity=0.062 Sum_probs=167.2
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+..+.+.+++.||..+.++++.|++ .+.++.|+||++||+.+... .+...+...|+++||.|+++|+||.|....
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAVKE--QSSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCCTT--SHHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCcch--hhHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 345788999999999999999999987 33567899999999865433 233334566777899999999999765432
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc--
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-- 612 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-- 612 (734)
.... ........+|+.+++++|.++..+|++|++++|+|+||.+++.++.++|+ ++++|+.+|+.. .......
T Consensus 141 ~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~~~v~~~p~~~-~~~~~~~~~ 215 (367)
T 2hdw_A 141 QPRN---VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR-VKAVVTSTMYDM-TRVMSKGYN 215 (367)
T ss_dssp SSSS---CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCCH-HHHHHHTTT
T ss_pred cCcc---ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC-ccEEEEeccccc-cHHHhhhhc
Confidence 2111 01112457899999999999888889999999999999999999999884 799998888632 1100000
Q ss_pred ---------------------------------cC---c---cc----ccc-------------cCCCCCHHHHHHHHhC
Q psy4818 613 ---------------------------------IA---Y---YS----ESE-------------FGSPNNKTHFHNLLSY 636 (734)
Q Consensus 613 ---------------------------------~~---~---~~----~~~-------------~g~~~~~~~~~~~~~~ 636 (734)
.. . .. ... +...........+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 00 0 00 000 0000011123344556
Q ss_pred CccCCCCCCCCCcc-CCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHH
Q psy4818 637 SPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMT 715 (734)
Q Consensus 637 sp~~~~~~p~~~~~-~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 715 (734)
+|...+.. ++ .| +||++|++|. ++.++.+++++ . +.++++++++++||.+...... .....
T Consensus 296 ~~~~~~~~----i~~~P-vLii~G~~D~--~~~~~~~~~~~---~-------~~~~~~~~~~g~gH~~~~~~~~-~~~~~ 357 (367)
T 2hdw_A 296 PILTYIKE----ISPRP-ILLIHGERAH--SRYFSETAYAA---A-------AEPKELLIVPGASHVDLYDRLD-RIPFD 357 (367)
T ss_dssp CSCTTGGG----GTTSC-EEEEEETTCT--THHHHHHHHHH---S-------CSSEEEEEETTCCTTHHHHCTT-TSCHH
T ss_pred ChhHhHHh----hcCCc-eEEEecCCCC--CHHHHHHHHHh---C-------CCCeeEEEeCCCCeeeeecCch-hHHHH
Confidence 67666664 66 77 9999999998 77777776665 4 6789999999999974321111 11456
Q ss_pred HHHHHHHHHc
Q psy4818 716 DIYVFLMKSL 725 (734)
Q Consensus 716 ~~~~fl~~~l 725 (734)
.+.+||.++|
T Consensus 358 ~i~~fl~~~l 367 (367)
T 2hdw_A 358 RIAGFFDEHL 367 (367)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 7899999875
No 43
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.86 E-value=5.6e-21 Score=198.41 Aligned_cols=240 Identities=15% Similarity=0.110 Sum_probs=165.1
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHh-cCeEEEEEecccCCCCC
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELG 533 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g 533 (734)
....+.+.+++.+| +|+++++.|++ .++.|+||++|||... .....|.. +...|++ .||.|+++||||.++..
T Consensus 48 ~~~~~~~~i~~~~g-~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~g~~~ 122 (313)
T 2wir_A 48 IHRVEDITIPGRGG-PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDH-VCRRLANLSGAVVVSVDYRLAPEHK 122 (313)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHCCEEEEEECCCTTTSC
T ss_pred CceEEEEEeeCCCC-cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHH-HHHHHHHHcCCEEEEeecCCCCCCC
Confidence 34688899998888 89999999975 3567999999998522 22334443 3344554 59999999999977642
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchhc
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDML 606 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~ 606 (734)
.....+|+.++++||.+.. .+|+++|+|+|+|+||++++.++.++|+. ++++|+.+|++|+.
T Consensus 123 -----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 191 (313)
T 2wir_A 123 -----------FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLT 191 (313)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCS
T ss_pred -----------CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCC
Confidence 1224679999999998752 26788999999999999999999887776 99999999998833
Q ss_pred cccccccCcccccccCCCCCHHHHHHH-------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHH
Q psy4818 607 RFNKFTIAYYSESEFGSPNNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKF 673 (734)
Q Consensus 607 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~ 673 (734)
......... +....+..........+ ...+|+...- ...||+||++|++|..+ .++..+
T Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~~~~P~lii~G~~D~~~--~~~~~~ 263 (313)
T 2wir_A 192 GSPTVSRVE-YSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADL-----SNLPPALVITAEYDPLR--DEGELY 263 (313)
T ss_dssp SCCCHHHHH-TCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCC-----TTCCCEEEEEEEECTTH--HHHHHH
T ss_pred CCCCcCHHH-hcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccc-----cCCCcceEEEcCcCcCh--HHHHHH
Confidence 221100000 00000000011111110 1134542111 23456999999999987 578899
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcC
Q psy4818 674 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 674 ~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 726 (734)
+++|++. |.+++++++++++|++... .....+....+.+||.++++
T Consensus 264 ~~~l~~~-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 264 AHLLKTR-------GVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHT-------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHC-------CCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999998 8999999999999998531 12235677788999988764
No 44
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.86 E-value=1e-20 Score=196.29 Aligned_cols=241 Identities=15% Similarity=0.138 Sum_probs=164.2
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHhc-CeEEEEEecccCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHF-NGIYAIPNIRGGGEL 532 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~~~~ 532 (734)
.....+.+.+++.+| .|++.++.|++ .++.|+||++|||... .....|.. +...|+++ ||.|+++|+||.|+.
T Consensus 44 ~~~~~~~~~i~~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~g~~ 118 (311)
T 2c7b_A 44 PIAETRDVHIPVSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDH-ICRRLSRLSDSVVVSVDYRLAPEY 118 (311)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CcceEEEEEecCCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHH-HHHHHHHhcCCEEEEecCCCCCCC
Confidence 344788999998888 89999999975 3457999999998522 22223433 34555544 999999999997764
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCC----ceeEEEEcCCcchh
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDM 605 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~ 605 (734)
. .....+|+.+++++|.+.. .+|+++++|+|+|+||++++.++.++|+ .++++|+.+|++++
T Consensus 119 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 119 K-----------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM 187 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC
Confidence 3 1224679999999998762 3688899999999999999999987765 58999999999884
Q ss_pred ccccccccCcccccccCC-CCCHHHHHHH-------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHH
Q psy4818 606 LRFNKFTIAYYSESEFGS-PNNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 671 (734)
Q Consensus 606 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~-------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~ 671 (734)
......... .+ ..+.. +........+ ...+|+...- ...||+||++|++|..++ ++.
T Consensus 188 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-----~~~~P~lii~G~~D~~~~--~~~ 258 (311)
T 2c7b_A 188 TGVPTASLV-EF-GVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADL-----GGLPPALVVTAEYDPLRD--EGE 258 (311)
T ss_dssp SSCCCHHHH-HH-HHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCC-----TTCCCEEEEEETTCTTHH--HHH
T ss_pred ccccccCCc-cH-HHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccc-----cCCCcceEEEcCCCCchH--HHH
Confidence 211100000 00 00000 0001111000 1234443211 223459999999999875 677
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcCC
Q psy4818 672 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 672 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 727 (734)
.++++|+.. +.+++++++++++|++... .....+....+.+||.++++.
T Consensus 259 ~~~~~l~~~-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 259 LYAYKMKAS-------GSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp HHHHHHHHT-------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHC-------CCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 888999988 8999999999999988621 122356778899999998864
No 45
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.86 E-value=1.8e-21 Score=192.94 Aligned_cols=214 Identities=17% Similarity=0.173 Sum_probs=155.5
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
+.+.+++.||.++.++++.|++ ++.|+||++||..+... .|. .+...|+++||.|+++|+||.|..+..+...
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~----~~~p~vv~~hG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 76 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK----APAPVIVIAQDIFGVNA--FMR-ETVSWLVDQGYAAVCPDLYARQAPGTALDPQ 76 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS----CSEEEEEEECCTTBSCH--HHH-HHHHHHHHTTCEEEEECGGGGTSTTCBCCTT
T ss_pred ceEEEecCCCCeEEEEEECCCC----CCCCEEEEEcCCCCCCH--HHH-HHHHHHHhCCcEEEeccccccCCCccccccc
Confidence 3456778899999999998864 57899999999765543 232 3456677789999999999977654321110
Q ss_pred -----------cccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 540 -----------GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 540 -----------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
..........+|+.+++++|.++..++ ++++++|+|+||.+++.++.++| ++++|+.+|....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~--- 150 (236)
T 1zi8_A 77 DERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE--- 150 (236)
T ss_dssp CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG---
T ss_pred chhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc---
Confidence 000011233678889999997765444 69999999999999999999988 7888887774321
Q ss_pred cccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 688 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~ 688 (734)
++...+.. ++.| +|+++|++|..|++.++.++++.+++. +
T Consensus 151 ----------------------------~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~-------~ 190 (236)
T 1zi8_A 151 ----------------------------KQLNKVPE----VKHP-ALFHMGGQDHFVPAPSRQLITEGFGAN-------P 190 (236)
T ss_dssp ----------------------------GCGGGGGG----CCSC-EEEEEETTCTTSCHHHHHHHHHHHTTC-------T
T ss_pred ----------------------------cchhhhhh----cCCC-EEEEecCCCCCCCHHHHHHHHHHHHhC-------C
Confidence 01112222 4555 999999999999999999999988765 4
Q ss_pred CcEEEEEeCCCCCCCCCch------HHhHHHHHHHHHHHHHHcCC
Q psy4818 689 NPLLLRVEQDAGHGQGTPL------MKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~~------~~~~~~~~~~~~fl~~~l~~ 727 (734)
++++++++++||++.... ....+....+.+||.++|+.
T Consensus 191 -~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 191 -LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp -TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred -CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 789999999999876432 11245677889999998864
No 46
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.86 E-value=1.2e-20 Score=184.91 Aligned_cols=213 Identities=15% Similarity=0.103 Sum_probs=156.9
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+..+.+.+++ +|.++.++++.|++ +.|+||++||+.+....+.+. .+...|+++||.|+++|+||.| .
T Consensus 8 ~~~~~~~~~~~~-~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~g---~ 77 (223)
T 2o2g_A 8 HQPQEYAVSVSV-GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNR-YVAEVLQQAGLATLLIDLLTQE---E 77 (223)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHH-HHHHHHHHHTCEEEEECSSCHH---H
T ss_pred CCceeeEEEEec-CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchH-HHHHHHHHCCCEEEEEcCCCcC---C
Confidence 345678888886 89999999998864 579999999987655543332 3456677779999999999843 2
Q ss_pred hhhhcccc---ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc
Q psy4818 535 DWHNAGRL---LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF 611 (734)
Q Consensus 535 ~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 611 (734)
........ .......+|+.++++++..+..+|+++++++|+|+||.+++.++.++|+.++++|+.+|..++..
T Consensus 78 s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---- 153 (223)
T 2o2g_A 78 EEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP---- 153 (223)
T ss_dssp HHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT----
T ss_pred CCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH----
Confidence 22211110 01112257888899999988888999999999999999999999999999999999998764311
Q ss_pred ccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcE
Q psy4818 612 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 691 (734)
Q Consensus 612 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~ 691 (734)
..+.. ++.| +|+++|++|..++. + ..+.+++. +.++
T Consensus 154 ----------------------------~~~~~----~~~P-~l~i~g~~D~~~~~-~---~~~~~~~~-------~~~~ 189 (223)
T 2o2g_A 154 ----------------------------SALPH----VKAP-TLLIVGGYDLPVIA-M---NEDALEQL-------QTSK 189 (223)
T ss_dssp ----------------------------TTGGG----CCSC-EEEEEETTCHHHHH-H---HHHHHHHC-------CSSE
T ss_pred ----------------------------HHHhc----CCCC-EEEEEccccCCCCH-H---HHHHHHhh-------CCCe
Confidence 11111 4455 99999999998863 2 34455555 6678
Q ss_pred EEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 692 LLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
++++++++||.+..+.. ..+....+.+||.++|+
T Consensus 190 ~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 190 RLVIIPRASHLFEEPGA-LTAVAQLASEWFMHYLR 223 (223)
T ss_dssp EEEEETTCCTTCCSTTH-HHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCcccCChHH-HHHHHHHHHHHHHHhcC
Confidence 99999999999876433 24677788999999874
No 47
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.85 E-value=2e-20 Score=194.95 Aligned_cols=237 Identities=15% Similarity=0.085 Sum_probs=157.5
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
+.....+.+.+ +|..+ ++|++. ....|+||++|||.... ....|......++.+.||+|+++|||++++.
T Consensus 55 ~~~~~~~~~~~---~g~~~----~~p~~~--~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 55 AEGVELTLTDL---GGVPC----IRQATD--GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp CTTCEEEEEEE---TTEEE----EEEECT--TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCCceEEEEEE---CCEeE----EecCCC--CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 34556666665 56444 567652 23344499999985322 2223333333444445999999999997754
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchhccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRF 608 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~ 608 (734)
. ....++|+.++++||.++ .+|+++|+|+|+|+||++++.++.+.|+. ++++|+.+|++|+...
T Consensus 126 ~-----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 193 (322)
T 3k6k_A 126 P-----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS 193 (322)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC
T ss_pred C-----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC
Confidence 3 223478999999999987 46899999999999999999999877664 8999999999986533
Q ss_pred cccccCcccccccCCCCCHHHHHHH------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHH
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNL------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIAT 676 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~ 676 (734)
....... .........+....+ ...+|+.... ...||+||+||++|.. ..++.+++++
T Consensus 194 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~~~pP~li~~G~~D~~--~~~~~~~~~~ 263 (322)
T 3k6k_A 194 RWSNSNL---ADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADL-----SGLPEMLIHVGSEEAL--LSDSTTLAER 263 (322)
T ss_dssp SHHHHHT---GGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCC-----TTCCCEEEEEESSCTT--HHHHHHHHHH
T ss_pred ccchhhc---cCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccc-----cCCCcEEEEECCcCcc--HHHHHHHHHH
Confidence 2100000 000000011111111 1234544322 3446799999999976 4689999999
Q ss_pred HHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHHHcCCC
Q psy4818 677 LQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 677 L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|+++ |+++++++|++++|++... .....+...++.+||.++|+..
T Consensus 264 l~~~-------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 264 AGAA-------GVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHT-------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHC-------CCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 9999 9999999999999987532 1223577888999999999754
No 48
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.85 E-value=6.9e-21 Score=195.20 Aligned_cols=235 Identities=14% Similarity=0.087 Sum_probs=164.1
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.+++ +|.++.++++.|+ +.|+||++||+.+... .|. .+...|+++||.|+++|+||.|+......
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~------~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT------GMPGVLFVHGWGGSQH--HSL-VRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE------SEEEEEEECCTTCCTT--TTH-HHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred ceeeEEecC-CCeEEEEEEecCC------CCcEEEEeCCCCCCcC--cHH-HHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 467778876 7889999999986 5799999999876543 233 34566777899999999999665433211
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccccc----
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI---- 613 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~---- 613 (734)
.. ......+|+.+++++|.++..+|+++|+|+|+|+||++++.++.++| .+++++.+|............
T Consensus 75 ~~----~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~ 148 (290)
T 3ksr_A 75 SV----TRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLN 148 (290)
T ss_dssp TC----BHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHH
T ss_pred cc----cHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccccccc
Confidence 11 11233689999999999888888999999999999999999999988 577787788765332111000
Q ss_pred -CcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 614 -AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 614 -~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
...+...+..+..... .++...+.. ++.| +|+++|++|..|++.++..+++.++.. + +++
T Consensus 149 ~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~P-~lii~G~~D~~v~~~~~~~~~~~~~~~-------~-~~~ 209 (290)
T 3ksr_A 149 ADPDLMDYRRRALAPGD------NLALAACAQ----YKGD-VLLVEAENDVIVPHPVMRNYADAFTNA-------R-SLT 209 (290)
T ss_dssp HSTTHHHHTTSCCCGGG------CHHHHHHHH----CCSE-EEEEEETTCSSSCHHHHHHHHHHTTTS-------S-EEE
T ss_pred CChhhhhhhhhhhhhcc------ccHHHHHHh----cCCC-eEEEEecCCcccChHHHHHHHHHhccC-------C-Cce
Confidence 0000000011111000 011111222 4556 999999999999999999999988765 4 789
Q ss_pred EEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 693 LRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 693 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+++++++||.+..... ..+....+.+||.++++..
T Consensus 210 ~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 210 SRVIAGADHALSVKEH-QQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp EEEETTCCTTCCSHHH-HHHHHHHHHHHHHHHHHTC
T ss_pred EEEcCCCCCCCCcchH-HHHHHHHHHHHHHHHhcCC
Confidence 9999999998865433 2567778899999998643
No 49
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.85 E-value=1.2e-20 Score=189.02 Aligned_cols=235 Identities=16% Similarity=0.167 Sum_probs=153.5
Q ss_pred EEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccc
Q psy4818 462 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 462 ~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
+.++ .||.+|.++++.|++. .++.|+||++||..+......|.. +...|+++||.|+++|+||.|.........
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~--~~~~p~vvl~HG~~~~~~~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~-- 77 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN--PEKCPLCIIIHGFTGHSEERHIVA-VQETLNEIGVATLRADMYGHGKSDGKFEDH-- 77 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC--CSSEEEEEEECCTTCCTTSHHHHH-HHHHHHHTTCEEEEECCTTSTTSSSCGGGC--
T ss_pred eEEe-cCCcEEEEEEEccCCC--CCCCCEEEEEcCCCcccccccHHH-HHHHHHHCCCEEEEecCCCCCCCCCccccC--
Confidence 4454 4889999999988752 246789999999766532333433 446677779999999999977543211110
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-----------
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----------- 610 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----------- 610 (734)
......+|+.+++++|.+...+ ++++++|||+||.+++.++.++|++++++|+.+|...+.....
T Consensus 78 --~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T 2wtm_A 78 --TLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDP 153 (251)
T ss_dssp --CHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBT
T ss_pred --CHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCc
Confidence 0012256777888888654333 4899999999999999999999999999999998754321100
Q ss_pred cccCccccccc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCC
Q psy4818 611 FTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 689 (734)
Q Consensus 611 ~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~ 689 (734)
..... ....+ +.......+..+...++...+.. ++.| +|++||++|..||+..+.++++.+.
T Consensus 154 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~~~----------- 216 (251)
T 2wtm_A 154 ENIPD-ELDAWDGRKLKGNYVRVAQTIRVEDFVDK----YTKP-VLIVHGDQDEAVPYEASVAFSKQYK----------- 216 (251)
T ss_dssp TBCCS-EEEETTTEEEETHHHHHHTTCCHHHHHHH----CCSC-EEEEEETTCSSSCHHHHHHHHHHSS-----------
T ss_pred hhcch-HHhhhhccccchHHHHHHHccCHHHHHHh----cCCC-EEEEEeCCCCCcChHHHHHHHHhCC-----------
Confidence 00000 00011 10001112222222333222332 5666 9999999999999988887766542
Q ss_pred cEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 690 PLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 690 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
.+++++++++||.. .... .+....+.+||.+++.
T Consensus 217 ~~~~~~~~~~gH~~-~~~~--~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 NCKLVTIPGDTHCY-DHHL--ELVTEAVKEFMLEQIA 250 (251)
T ss_dssp SEEEEEETTCCTTC-TTTH--HHHHHHHHHHHHHHHC
T ss_pred CcEEEEECCCCccc-chhH--HHHHHHHHHHHHHhcc
Confidence 35889999999998 4332 4677789999998875
No 50
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=1.1e-18 Score=183.55 Aligned_cols=294 Identities=9% Similarity=0.073 Sum_probs=191.8
Q ss_pred hccCCccCCcEEeCCeEEEEEEcC----CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC
Q psy4818 87 MANYEKYSAPQRQENNYFYFHNKG----LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK 162 (734)
Q Consensus 87 ~~~~~~~~~p~~~g~~~~~~~~~~----~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~ 162 (734)
+......+.|..||.+++|..... ......||+.+..++..+.| . .+..++|||||++|||....
T Consensus 11 l~~~~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~---------~~~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 11 FAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI--E---------NATMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE--E---------SCEEEEECTTSSEEEEEEEE
T ss_pred ceeeEEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc--c---------cCCCeEECCCCCEEEEEEec
Confidence 334444455555999999987642 22356799988777766655 1 14679999999999999887
Q ss_pred CCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCC-----------CCCcccccCCcEEEEEE
Q psy4818 163 SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTA-----------DGTETTAHMGQKIYYHV 231 (734)
Q Consensus 163 ~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~ 231 (734)
.+.+..+||++|+++|+....+.... ...+.|||||+.|+|...+...... +|.........+||+++
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred cCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 65566899999999988654443332 5789999999999999864210000 00000001235799999
Q ss_pred CCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-----C-CceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 232 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-----Q-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 232 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-----~-~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
+.++... ..+.. + ....+.||||| |++...... . ..+||++| ++ ....+..+ ..
T Consensus 159 ~~~~~~~-~~l~~-~----~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~---------~~~~l~~~-~~ 218 (347)
T 2gop_A 159 TESEEVI-EEFEK-P----RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DG---------KEEKMFEK-VS 218 (347)
T ss_dssp TTTTEEE-EEEEE-E----TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TT---------EEEEEEEE-ES
T ss_pred CCCCeEE-eeecC-C----CcccccCCCCe--EEEEEecccccccccccccEEEeC--CC---------ceEEeccC-cc
Confidence 9876430 12222 2 23468999999 666654432 1 35899999 42 23344443 22
Q ss_pred eEEEEEecCCeEEEEeCCCC----CCceEEEEecCCCCCCCceEeecCCCCceeEE-EEEeeCCEEEEEEEeCCceeEEE
Q psy4818 306 HHEIIANNGPELIVKTTKNA----PKGKVVTINLNNPCEKNWKTLIPEDENRTLDV-VAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 306 ~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
.. .++|||++|++.++... ...+|+.+| ++. ++.++... ...+.. ..+. ++ +++....++..+|+
T Consensus 219 ~~-~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~~-~~~~~~~~~~s-dg-~~~~~~~~~~~~l~- 288 (347)
T 2gop_A 219 FY-AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---VMGILDEV-DRGVGQAKIKD-GK-VYFTLFEEGSVNLY- 288 (347)
T ss_dssp EE-EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---EEESSTTC-CSEEEEEEEET-TE-EEEEEEETTEEEEE-
T ss_pred ee-eECCCCCEEEEEEccccCCccccceEEEEC--CCc---eEeccccC-CcccCCccEEc-Cc-EEEEEecCCcEEEE-
Confidence 22 25999999999886542 356899999 443 45666554 233443 5555 45 88888888878888
Q ss_pred EECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEe
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 428 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d 428 (734)
++ +|+..+.+. ..+.+.++++++ .++++.++..+|.++|.+|
T Consensus 289 ~~--~g~~~~~~~-~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 289 IW--DGEIKPIAK-GRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EE--SSSEEEEEC-SSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred Ec--CCceEEEec-CCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 87 576533333 356777888877 5888889999999999986
No 51
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.84 E-value=1.6e-21 Score=199.39 Aligned_cols=246 Identities=14% Similarity=0.061 Sum_probs=157.9
Q ss_pred eEEEEEEEc-CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--ccCC----
Q psy4818 458 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGG---- 530 (734)
Q Consensus 458 ~~~~~~~~s-~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~~---- 530 (734)
..+.+.+.+ .+|.++++.++.|++.. .+++|+||++||+.+....+.....+..+++++|++|+++|. ||.+
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~ 99 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPND 99 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCC
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccccccccc
Confidence 344555544 47889999999999864 578999999999866543221111234566777999999996 4433
Q ss_pred -----CCCchhhhccccc-c-CCCchhHH-HH-HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 531 -----ELGEDWHNAGRLL-K-KQNCFDDF-QA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 531 -----~~g~~~~~~~~~~-~-~~~~~~D~-~~-~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
+.|..|+...... + ....+.++ .. .+.++ ++.+.+++|++|+|+|+||++++.++.++|++|+++++.+|
T Consensus 100 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 178 (283)
T 4b6g_A 100 DAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLI-EKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSP 178 (283)
T ss_dssp SSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHH-HHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESC
T ss_pred ccccccCCCcccccCccCcccchhhHHHHHHHHHHHHH-HHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECC
Confidence 2233333221110 0 11122333 22 33333 33344578999999999999999999999999999999999
Q ss_pred cchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCC-hHHHHHHHHHHhh
Q psy4818 602 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP-LHSYKFIATLQEK 680 (734)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~-~~~~~~~~~L~~~ 680 (734)
+++....... ...+...+|.. .+ .+..++|...++.. ...||+||+||+.|..|+. .++.+++++|++.
T Consensus 179 ~~~~~~~~~~--~~~~~~~~g~~--~~---~~~~~~~~~~~~~~---~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~ 248 (283)
T 4b6g_A 179 ILSPSLVPWG--EKAFTAYLGKD--RE---KWQQYDANSLIQQG---YKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA 248 (283)
T ss_dssp CCCGGGSHHH--HHHHHHHHCSC--GG---GGGGGCHHHHHHHT---CCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHH
T ss_pred ccccccCcch--hhhHHhhcCCc--hH---HHHhcCHHHHHHhc---ccCCCEEEEecCCCccCcchhhHHHHHHHHHHc
Confidence 8875432100 00011112321 11 12234444333321 1233599999999999886 3389999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
|.+++++++++++|.+.. ......+.+.|+.++|+
T Consensus 249 -------g~~~~~~~~~g~~H~~~~----~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 249 -------NQPVDVRFHKGYDHSYYF----IASFIGEHIAYHAAFLK 283 (283)
T ss_dssp -------TCCCEEEEETTCCSSHHH----HHHHHHHHHHHHHTTCC
T ss_pred -------CCCceEEEeCCCCcCHhH----HHHHHHHHHHHHHHhcC
Confidence 999999999999998732 23456678899988763
No 52
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.84 E-value=7e-20 Score=193.92 Aligned_cols=247 Identities=15% Similarity=0.073 Sum_probs=163.4
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-c--cccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-P--TFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~--~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
.+..+.+.+.+.+|..+.+.++.|++. .++.|+||++|||...... . .|.. +...|+++||+|+.+||||++++
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~la~~g~~vv~~d~r~~gg~ 155 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRR-WCTDLAAAGSVVVMVDFRNAWTA 155 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHH-HHHHHHHTTCEEEEEECCCSEET
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhH-HHHHHHhCCCEEEEEecCCCCCC
Confidence 456788888888998899999999863 2368999999998522222 1 3332 34556657999999999998644
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhc-----CCCceeEEEEcCCcch
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ-----RPELYGAALILVGALD 604 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~-----~p~~~~a~v~~~~~~d 604 (734)
.. .......++|+.++++|+.++- ..| +|+|+|+|+||++++.++.+ .|+.++++|+.+|+++
T Consensus 156 ~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~ 226 (361)
T 1jkm_A 156 EG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 226 (361)
T ss_dssp TE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred CC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccc
Confidence 21 1123345789999999998762 234 99999999999999999987 7888999999999987
Q ss_pred hccccc----cccCcccccccCCCCCHHHHHHHH-------------hCCccCCCCCCCCCccCCcEEEEecCCCCCCCC
Q psy4818 605 MLRFNK----FTIAYYSESEFGSPNNKTHFHNLL-------------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 667 (734)
Q Consensus 605 ~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~-------------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~ 667 (734)
...... ......+....+..........+. ..+|+...... -...||+||++|++|..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--l~~l~P~Lii~G~~D~~~~- 303 (361)
T 1jkm_A 227 GGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDE--LRGLPPFVVAVNELDPLRD- 303 (361)
T ss_dssp CCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHH--HTTCCCEEEEEETTCTTHH-
T ss_pred cccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhh--HcCCCceEEEEcCcCcchh-
Confidence 621100 000000000000000111111100 12333110000 0122359999999999887
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCC-Cch---HHh-HHHHHHHHHHHHHHc
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG-TPL---MKS-IEEMTDIYVFLMKSL 725 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~-~~~~~~~~~fl~~~l 725 (734)
++.+++++|++. |.+++++++++++|++. ... ... .+....+.+||.++.
T Consensus 304 -~~~~~~~~l~~~-------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 304 -EGIAFARRLARA-------GVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp -HHHHHHHHHHHT-------TCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHc-------CCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 889999999998 89999999999999876 211 222 456777899998764
No 53
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.84 E-value=8.8e-20 Score=177.00 Aligned_cols=201 Identities=16% Similarity=0.125 Sum_probs=145.9
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCC--CcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYG--VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~--~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
..+.+.+++.|| +++++++.|++ .++.|+||++||++. ......+...+...|+++||.|+++|+||.|.....
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred ccceEEEECCCc-eEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 356788899999 99999998875 357899999999632 222222223455677778999999999996654322
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 615 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 615 (734)
+ .......+|+.+++++|.++ .+.++++++|+|+||.+++.++ ++| .++++|+.+|..+...
T Consensus 81 ~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~-------- 142 (208)
T 3trd_A 81 Y------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG-------- 142 (208)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG--------
T ss_pred c------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC--------
Confidence 1 22234578999999999887 4558999999999999999999 667 7899998888762110
Q ss_pred ccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy4818 616 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 695 (734)
Q Consensus 616 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 695 (734)
..++.. .+.| +|+++|++|..|++.++.++++++.. .+++++
T Consensus 143 --------------------~~~~~~-------~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~~----------~~~~~~ 184 (208)
T 3trd_A 143 --------------------FASLTQ-------MASP-WLIVQGDQDEVVPFEQVKAFVNQISS----------PVEFVV 184 (208)
T ss_dssp --------------------GTTCCS-------CCSC-EEEEEETTCSSSCHHHHHHHHHHSSS----------CCEEEE
T ss_pred --------------------chhhhh-------cCCC-EEEEECCCCCCCCHHHHHHHHHHccC----------ceEEEE
Confidence 012222 3345 99999999999999998887776532 368899
Q ss_pred eCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 696 EQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
++++||.+.... .+....+.+||
T Consensus 185 ~~~~~H~~~~~~---~~~~~~i~~fl 207 (208)
T 3trd_A 185 MSGASHFFHGRL---IELRELLVRNL 207 (208)
T ss_dssp ETTCCSSCTTCH---HHHHHHHHHHH
T ss_pred eCCCCCcccccH---HHHHHHHHHHh
Confidence 999999987543 24444556665
No 54
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=4.7e-18 Score=183.55 Aligned_cols=266 Identities=14% Similarity=0.100 Sum_probs=183.2
Q ss_pred EeCCeEEEEEEcCCCC-eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 98 RQENNYFYFHNKGLQN-HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~-~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
..+.+++|.....+.. ...|++.+..++..+.+.... ..+..++|||||++|||+...+|. ..|++||++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~~la~~s~~~~~--~~i~~~d~~ 211 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLA 211 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECTTSS--CEEEEEETT
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCCEEEEEEecCCC--cEEEEEECC
Confidence 4477888888764322 256788776666666665433 237889999999999999876543 689999999
Q ss_pred CCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEE
Q psy4818 177 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 256 (734)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 256 (734)
+|+.............++|||||+.|+|+...+ ....||++++.++.. ..+ .........+.
T Consensus 212 tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~-------------g~~~i~~~d~~~~~~--~~l---~~~~~~~~~~~ 273 (415)
T 2hqs_A 212 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT-------------GSLNLYVMDLASGQI--RQV---TDGRSNNTEPT 273 (415)
T ss_dssp TCCEEEEECCSSCEEEEEECTTSSEEEEEECTT-------------SSCEEEEEETTTCCE--EEC---CCCSSCEEEEE
T ss_pred CCcEEEeecCCCcccCEEEcCCCCEEEEEEecC-------------CCceEEEEECCCCCE--EeC---cCCCCcccceE
Confidence 998654333332346899999999999987522 234799999987642 111 12233567899
Q ss_pred EecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 257 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 257 ~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
|||||++|++...+. ....||++|+.++. ...+......... .|+|||+.|++.+..++ ...|+++|+
T Consensus 274 ~spdg~~l~~~s~~~-g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~~i~~~d~ 342 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQA-GRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDL 342 (415)
T ss_dssp ECTTSSEEEEEECTT-SSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEET
T ss_pred ECCCCCEEEEEECCC-CCcEEEEEECCCCC---------EEEEecCCCcccCeEECCCCCEEEEEECcCC-ceEEEEEEC
Confidence 999999999887542 33689999998832 2222222222223 39999999998876543 567999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCccc
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 408 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~ 408 (734)
+++. ...+.... .+..+.+. +++.|++....++...|++||+. |+.++.|+...+.+.+++++|..
T Consensus 343 ~~~~---~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 343 ATGG---VQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TTCC---EEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CCCC---EEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 8876 34444332 33444444 44567777767777799999994 66667888777888888888764
No 55
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.83 E-value=1.5e-19 Score=183.14 Aligned_cols=217 Identities=13% Similarity=0.043 Sum_probs=152.7
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcccc----HHHHHHHHhc----CeEEEEEeccc
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS----ISRCMFLRHF----NGIYAIPNIRG 528 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~----~~~~~~l~~~----G~~v~~~~~rG 528 (734)
..+++.+.+. +|..+.+.++.|+++...++.|+||++||+.+....+... ..++..|.++ ||+|+.+|+|+
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~ 110 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA 110 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC
T ss_pred eEEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCC
Confidence 5677777765 6788999999999876667899999999986554322211 1234445544 59999999998
Q ss_pred CCCC-CchhhhccccccCCCchhH-HHHHHHHHHHcCCC--CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 529 GGEL-GEDWHNAGRLLKKQNCFDD-FQAAAEYMINKKYT--KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 529 ~~~~-g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
.+.. ...|. ...++ +..+++++.++..+ |++|++|+|+|+||++++.++.++|++|+++|+.+|..+
T Consensus 111 ~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 181 (268)
T 1jjf_A 111 AGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 181 (268)
T ss_dssp CCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred CCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCC
Confidence 5421 11110 01233 33456666655334 899999999999999999999999999999999999775
Q ss_pred hccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 605 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 605 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
+.. +...+.... .. .. ...||+||+||++|..|+. +.+++++|++.
T Consensus 182 ~~~---------~~~~~~~~~--~~-------------~~----~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~---- 227 (268)
T 1jjf_A 182 TYP---------NERLFPDGG--KA-------------AR----EKLKLLFIACGTNDSLIGF--GQRVHEYCVAN---- 227 (268)
T ss_dssp SCC---------HHHHCTTTT--HH-------------HH----HHCSEEEEEEETTCTTHHH--HHHHHHHHHHT----
T ss_pred CCc---------hhhhcCcch--hh-------------hh----hcCceEEEEecCCCCCccH--HHHHHHHHHHC----
Confidence 421 111111110 00 01 3445699999999998874 77899999988
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 685 PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
|.+++++++++++|.+.. ..+...+++.||.++
T Consensus 228 ---g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 228 ---NINHVYWLIQGGGHDFNV----WKPGLWNFLQMADEA 260 (268)
T ss_dssp ---TCCCEEEEETTCCSSHHH----HHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEcCCCCcCHhH----HHHHHHHHHHHHHhc
Confidence 889999999999998742 234566788999876
No 56
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.83 E-value=1.7e-20 Score=193.69 Aligned_cols=210 Identities=16% Similarity=0.190 Sum_probs=150.2
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
...+.|. +..+.+.++.|++. .++.|+||++|||............+...|+++||+|+++||||+++..
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~----- 127 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT----- 127 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-----
T ss_pred eeeeccC---CCCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-----
Confidence 4455554 44467788888642 4678999999998543332222222346666789999999999977643
Q ss_pred ccccccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCC-------CceeEEEEcCCcchhccccc
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRP-------ELYGAALILVGALDMLRFNK 610 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p-------~~~~a~v~~~~~~d~~~~~~ 610 (734)
....++|+.+++++|.+. ...+++||+|+|+|+||++++.++.+.+ +.++++|+.+|+.|+.....
T Consensus 128 ------~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~ 201 (303)
T 4e15_A 128 ------LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN 201 (303)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT
T ss_pred ------hhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc
Confidence 112367999999999773 2356889999999999999999988654 27999999999988754432
Q ss_pred cccCcccccccCCCCCHHHHHHHHhCCcc-CCCCCCCCCc----cCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCC
Q psy4818 611 FTIAYYSESEFGSPNNKTHFHNLLSYSPL-HNIKVPPNNT----QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 611 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp~-~~~~~p~~~~----~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~ 685 (734)
.. .......++... +.+...||+ ..+.. + ..| +||+||++|..|++.++.+++++|++.
T Consensus 202 ~~-~~~~~~~~~~~~-----~~~~~~sp~~~~~~~----~~~~~~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~----- 265 (303)
T 4e15_A 202 LE-SVNPKNILGLNE-----RNIESVSPMLWEYTD----VTVWNSTK-IYVVAAEHDSTTFIEQSRHYADVLRKK----- 265 (303)
T ss_dssp CT-TTSGGGTTCCCT-----TTTTTTCGGGCCCCC----GGGGTTSE-EEEEEEEESCHHHHHHHHHHHHHHHHH-----
T ss_pred cc-ccchhhhhcCCH-----HHHHHcCchhhcccc----cccCCCCC-EEEEEeCCCCCCchHHHHHHHHHHHHC-----
Confidence 10 011111122211 123466777 45543 3 445 999999999999999999999999999
Q ss_pred CCCCcEEEEEeCCCCCC
Q psy4818 686 YQKNPLLLRVEQDAGHG 702 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~ 702 (734)
|.+++++++++++|.
T Consensus 266 --g~~~~~~~~~g~~H~ 280 (303)
T 4e15_A 266 --GYKASFTLFKGYDHF 280 (303)
T ss_dssp --TCCEEEEEEEEEETT
T ss_pred --CCceEEEEeCCCCch
Confidence 899999999999994
No 57
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.83 E-value=2.3e-20 Score=193.49 Aligned_cols=230 Identities=16% Similarity=0.154 Sum_probs=158.4
Q ss_pred Cc-eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHH-hcCeEEEEEecccCCCC
Q psy4818 456 LF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLR-HFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 456 ~~-~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~-~~G~~v~~~~~rG~~~~ 532 (734)
.+ ..+.+.+++.+| .|++.+| +. .++.|+||++|||.... ....+.. +...|+ +.||.|+.+||||.|+.
T Consensus 52 ~~~~~~~~~i~~~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~Vv~~dyrg~g~~ 124 (311)
T 1jji_A 52 RVERVEDRTIKGRNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDA-LCRRIARLSNSTVVSVDYRLAPEH 124 (311)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTSEEEEEECCCTTTS
T ss_pred CcceEEEEEecCCCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHH-HHHHHHHHhCCEEEEecCCCCCCC
Confidence 44 588899988888 8999988 43 35789999999986322 2223433 344455 56999999999997764
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchh
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDM 605 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~ 605 (734)
. .....+|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.++|+. ++++|+.+|++|+
T Consensus 125 ~-----------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 125 K-----------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred C-----------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 2 1224679999999998752 36888999999999999999999877765 9999999999876
Q ss_pred ccccccccCcccccccC-CC--CCHHHHHHH-------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH
Q psy4818 606 LRFNKFTIAYYSESEFG-SP--NNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 669 (734)
Q Consensus 606 ~~~~~~~~~~~~~~~~g-~~--~~~~~~~~~-------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~ 669 (734)
...... + .++. .+ ........+ ...+|+. ... ...||+||++|++|..+ .+
T Consensus 194 ~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l---~~~~P~li~~G~~D~l~--~~ 260 (311)
T 1jji_A 194 VAPTPS-----L-LEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIF--ADL---ENLPPALIITAEYDPLR--DE 260 (311)
T ss_dssp SSCCHH-----H-HHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGG--SCC---TTCCCEEEEEEEECTTH--HH
T ss_pred CCCCcc-----H-HHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCccc--ccc---cCCChheEEEcCcCcch--HH
Confidence 432100 0 0000 00 011111110 1124443 111 23456999999999987 47
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc---hHHhHHHHHHHHHHHHH
Q psy4818 670 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP---LMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~ 723 (734)
+..++++|++. |.+++++++++++|++... .....+....+.+||.+
T Consensus 261 ~~~~~~~l~~~-------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 261 GEVFGQMLRRA-------GVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHHT-------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHc-------CCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 88899999998 8999999999999988532 12234667778888864
No 58
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.83 E-value=2.6e-20 Score=187.92 Aligned_cols=243 Identities=15% Similarity=0.061 Sum_probs=157.8
Q ss_pred ceEEEEEEEcC-CCcEEeEEEEEecccc----CCCCCcEEEEecCCCCCcCCccccH--HHHHHHHhcCeEEEEEecccC
Q psy4818 457 FQTKQVYFRSK-DGTRVPMYIIHRVGAL----RNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGG 529 (734)
Q Consensus 457 ~~~~~~~~~s~-dg~~i~~~~~~p~~~~----~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG~ 529 (734)
+..+.+++.+. .|..+++.++.|++.+ ++++.|+||++||+.+.... |.. ....++++.|++|+.+++|++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~ 82 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNS--WLKRTNVERLLRGTNLIVVMPNTSNG 82 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTTH--HHHHSCHHHHTTTCCCEEEECCCTTS
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHH--HHhccCHHHHHhcCCeEEEEECCCCC
Confidence 55677777764 6789999999998852 35789999999998755432 322 244556667999999999876
Q ss_pred CCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc
Q psy4818 530 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 609 (734)
Q Consensus 530 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 609 (734)
+..... . + ........+|+...++.+..+..+|+++++|+|+|+||++++.++. +|++|+++|+.+|..++....
T Consensus 83 ~~~~~~--~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~ 157 (263)
T 2uz0_A 83 WYTDTQ--Y-G-FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFS 157 (263)
T ss_dssp TTSBCT--T-S-CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCC
T ss_pred ccccCC--C-c-ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcc
Confidence 432100 0 0 0000111234444454443323468899999999999999999999 999999999999998765422
Q ss_pred cccc---C-cccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccC-CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 610 KFTI---A-YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQY-PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 610 ~~~~---~-~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~-P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
.... . ..+...++.+... .+..++|...+.. +.. +|+||+||+.|..| .++.+++++|++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~---- 223 (263)
T 2uz0_A 158 PESQNLGSPAYWRGVFGEIRDW----TTSPYSLESLAKK----SDKKTKLWAWCGEQDFLY--EANNLAVKNLKKL---- 223 (263)
T ss_dssp GGGTTCSCHHHHHHHHCCCSCT----TTSTTSHHHHGGG----CCSCSEEEEEEETTSTTH--HHHHHHHHHHHHT----
T ss_pred ccccccccchhHHHHcCChhhh----ccccCCHHHHHHh----ccCCCeEEEEeCCCchhh--HHHHHHHHHHHHC----
Confidence 1000 0 0011112222111 1223444444443 221 45999999999987 4678999999988
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 685 PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|.+++++++++ ||.+.. ..+...++++||.++|+..
T Consensus 224 ---g~~~~~~~~~g-~H~~~~----~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 224 ---GFDVTYSHSAG-THEWYY----WEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp ---TCEEEEEEESC-CSSHHH----HHHHHHHHHHHSSSCCCCC
T ss_pred ---CCCeEEEECCC-CcCHHH----HHHHHHHHHHHHHhhccch
Confidence 88999999999 997631 1355677899999888754
No 59
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.83 E-value=1.8e-19 Score=182.35 Aligned_cols=237 Identities=16% Similarity=0.110 Sum_probs=158.6
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+.+.++ .+|.+|.++++.|++ .+.|+||++||+.+......|. .+...|+++||.|+++|+||.|.......
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 94 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG----EIYDMAIIFHGFTANRNTSLLR-EIANSLRDENIASVRFDFNGHGDSDGKFE 94 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS----SSEEEEEEECCTTCCTTCHHHH-HHHHHHHHTTCEEEEECCTTSTTSSSCGG
T ss_pred cceEEEec-cCCEEEEEEEEcCCC----CCCCEEEEEcCCCCCccccHHH-HHHHHHHhCCcEEEEEccccccCCCCCCC
Confidence 45666665 589999999998864 4589999999987654333333 34566777899999999999665442211
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc------
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF------ 611 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------ 611 (734)
.. .-....+|+.++++++.++. +.++++|+|+|+||++++.++.++|+.++++|+.+|..+.......
T Consensus 95 ~~----~~~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 168 (270)
T 3pfb_A 95 NM----TVLNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGV 168 (270)
T ss_dssp GC----CHHHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTE
T ss_pred cc----CHHHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhcc
Confidence 11 11123678888899987653 3358999999999999999999999999999999998765431100
Q ss_pred ccCccccc---cc-CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCC
Q psy4818 612 TIAYYSES---EF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 687 (734)
Q Consensus 612 ~~~~~~~~---~~-g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~ 687 (734)
.....+.. .+ ...........+....+...+.. ++.| +|+++|++|..+++..+.++++.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~--------- 234 (270)
T 3pfb_A 169 TYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQ----FTKP-VCLIHGTDDTVVSPNASKKYDQIYQ--------- 234 (270)
T ss_dssp ECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTT----CCSC-EEEEEETTCSSSCTHHHHHHHHHCS---------
T ss_pred ccCcccccccccccccccchhHhhcccccCHHHHHhh----CCcc-EEEEEcCCCCCCCHHHHHHHHHhCC---------
Confidence 00000000 00 10011222334444444444444 6677 9999999999999988877776543
Q ss_pred CCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 688 KNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
.+++++++++||.+.... ..+....+.+||.++
T Consensus 235 --~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 235 --NSTLHLIEGADHCFSDSY--QKNAVNLTTDFLQNN 267 (270)
T ss_dssp --SEEEEEETTCCTTCCTHH--HHHHHHHHHHHHC--
T ss_pred --CCeEEEcCCCCcccCccc--hHHHHHHHHHHHhhc
Confidence 358999999999987432 246666678887654
No 60
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.83 E-value=1.6e-19 Score=186.19 Aligned_cols=246 Identities=13% Similarity=0.102 Sum_probs=163.8
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHH--HHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS--RCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
.++.+++.|. .+.+|+++ +.|.. ++.|+||++||+.+......|... +.+++++.|++|+++|.++++.|.
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~- 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS- 81 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC-
T ss_pred eEEEEEEECccCCCceEEE-ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc-
Confidence 4566677765 46677777 44432 578999999998532222233222 346677789999999998765543
Q ss_pred hhhhccc--cccCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc
Q psy4818 535 DWHNAGR--LLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK 610 (734)
Q Consensus 535 ~~~~~~~--~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 610 (734)
+|..... +......+++++ .++.++.++.-+++++++|+|+||||++++.++.++|++|+++|+.+|.+++.....
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 161 (304)
T 1sfr_A 82 DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMG 161 (304)
T ss_dssp BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTH
T ss_pred ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccch
Confidence 2222110 000133455543 344444443347888999999999999999999999999999999999876543110
Q ss_pred -c-------ccCc-ccccccCCCCCHHHHHHHHhCCccCCCCCCCCCc--cCCcEEEEecCCCC--------------CC
Q psy4818 611 -F-------TIAY-YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLTGDHDD--------------RV 665 (734)
Q Consensus 611 -~-------~~~~-~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~--~~P~~Li~~g~~D~--------------~v 665 (734)
. ..+. .+...||.+.. ..+.+.+|+..+.. + +-+|++|.+|+.|+ +|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~----l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~ 233 (304)
T 1sfr_A 162 PTLIGLAMGDAGGYKASDMWGPKED----PAWQRNDPLLNVGK----LIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGF 233 (304)
T ss_dssp HHHHHHHHHHTTSCCHHHHHCSTTS----THHHHSCTTTTHHH----HHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHH
T ss_pred hhhhhHhhhhccccchHHhcCCcch----hhhHhcCHHHHHHH----hhhcCCeEEEEecCCCCccccccccccchhHHH
Confidence 0 0000 01123454432 23456778766543 3 22459999999998 67
Q ss_pred CChHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 666 PPLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 666 ~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
++.++.+++++|++. | .++++.+|++++|.+.. ..+...+++.||.++|+..
T Consensus 234 ~~~~~~~~~~~L~~~-------G~~~v~~~~~~~g~H~~~~----w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 234 VRTSNIKFQDAYNAG-------GGHNGVFDFPDSGTHSWEY----WGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHHHHHHHHHT-------TCCSEEEECCSCCCSSHHH----HHHHHHHTHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhC-------CCCceEEEecCCCccCHHH----HHHHHHHHHHHHHHhcCCC
Confidence 889999999999998 8 99999999888997531 2345567899999999864
No 61
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.82 E-value=2.9e-19 Score=174.92 Aligned_cols=208 Identities=15% Similarity=0.090 Sum_probs=153.3
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCC--CcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYG--VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~--~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
..+.+.+++.|| ++.++++.|++.. .++.|+||++||+.. ......+...+...|+++||.|+++|+||.|.....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 86 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS 86 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 467888999898 8999999987620 145899999999642 222222222355677778999999999997654422
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 615 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 615 (734)
+ .......+|+.++++++.++. +.++++++|+|+||++++.++.++ .++++|+.+|..+...
T Consensus 87 ~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~-------- 148 (220)
T 2fuk_A 87 F------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-------- 148 (220)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------
T ss_pred c------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------
Confidence 2 122345789999999998873 677999999999999999999886 7899999998775432
Q ss_pred ccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy4818 616 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 695 (734)
Q Consensus 616 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 695 (734)
+..+. ...| +|+++|++|..|++.++.+++++++ ..+++++
T Consensus 149 -----------------------~~~~~-----~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~----------~~~~~~~ 189 (220)
T 2fuk_A 149 -----------------------FSDVQ-----PPAQ-WLVIQGDADEIVDPQAVYDWLETLE----------QQPTLVR 189 (220)
T ss_dssp -----------------------CTTCC-----CCSS-EEEEEETTCSSSCHHHHHHHHTTCS----------SCCEEEE
T ss_pred -----------------------hhhcc-----cCCc-EEEEECCCCcccCHHHHHHHHHHhC----------cCCcEEE
Confidence 11111 1234 9999999999999988887776652 2468899
Q ss_pred eCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 696 EQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++++||.+... . .+....+.+||.++|..
T Consensus 190 ~~~~~H~~~~~-~--~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 190 MPDTSHFFHRK-L--IDLRGALQHGVRRWLPA 218 (220)
T ss_dssp ETTCCTTCTTC-H--HHHHHHHHHHHGGGCSS
T ss_pred eCCCCceehhh-H--HHHHHHHHHHHHHHhhc
Confidence 99999998763 2 35667789999988753
No 62
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.82 E-value=1.7e-19 Score=194.12 Aligned_cols=241 Identities=14% Similarity=0.130 Sum_probs=162.5
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
..+++.++. +|..++++++.+. +++.|+||++||+.+.... |.......+.++||.|+++|+||.|+...
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~--- 203 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAIISE----DKAQDTLIVVGGGDTSRED--LFYMLGYSGWEHDYNVLMVDLPGQGKNPN--- 203 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCS----SSCCCEEEEECCSSCCHHH--HHHHTHHHHHHTTCEEEEECCTTSTTGGG---
T ss_pred CcEEEEEeE-CCeEEEEEEEcCC----CCCCCEEEEECCCCCCHHH--HHHHHHHHHHhCCcEEEEEcCCCCcCCCC---
Confidence 467777776 6788999888432 3456999999997544332 22222223335699999999999665421
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCc--
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY-- 615 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-- 615 (734)
.. ........+|+.+++++|..++ ++|+|+|+|+||++++.++.++| .++++|+.+|+.++..........
T Consensus 204 ~~--~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~ 276 (405)
T 3fnb_A 204 QG--LHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTAL 276 (405)
T ss_dssp GT--CCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC---
T ss_pred CC--CCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhh
Confidence 11 1222344778889999987654 68999999999999999999999 889999999998875432110000
Q ss_pred ---cccc-----------------------ccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH
Q psy4818 616 ---YSES-----------------------EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 669 (734)
Q Consensus 616 ---~~~~-----------------------~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~ 669 (734)
.+.. .++.......+..+..+++...+.. +++| +||++|++|..|++.+
T Consensus 277 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vLii~G~~D~~v~~~~ 351 (405)
T 3fnb_A 277 KAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNK----IDVP-SLFLVGAGEDSELMRQ 351 (405)
T ss_dssp ---------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGG----CCSC-EEEEEETTSCHHHHHH
T ss_pred hCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhh----CCCC-EEEEecCCCcCCChHH
Confidence 0000 0111111122233334444433443 6777 9999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC-chHHhHHHHHHHHHHHHHHcCC
Q psy4818 670 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT-PLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+.+++++|++. +.++++++++++.|+... ......+....+.+||.++|+.
T Consensus 352 ~~~l~~~l~~~-------~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 352 SQVLYDNFKQR-------GIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp HHHHHHHHHHT-------TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccC-------CCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99999999988 889999999776665322 1222356677899999999974
No 63
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.82 E-value=3.6e-20 Score=179.46 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=129.0
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHH---
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN--- 561 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~--- 561 (734)
.+..|+||++||..+... .|. .+.+.|...|+.|++|+.+|.+.|+..+..... .....+++..+.++.+++
T Consensus 19 ~~a~~~Vv~lHG~G~~~~--~~~-~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTAA--DII-SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp TTCSEEEEEECCTTCCHH--HHH-GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCCHH--HHH-HHHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHH
Confidence 456789999999432221 121 123445557999999999987666544443221 122334444444444332
Q ss_pred cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCC
Q psy4818 562 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 641 (734)
Q Consensus 562 ~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 641 (734)
...+|++||+++|+|+||++++.++.++|+.|+++|+.+|.+-.... ... ..
T Consensus 94 ~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~-----------------~~~-----------~~ 145 (210)
T 4h0c_A 94 AQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL-----------------AIG-----------NY 145 (210)
T ss_dssp HTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC-----------------CGG-----------GC
T ss_pred HhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh-----------------hhh-----------hh
Confidence 23479999999999999999999999999999999988874311000 000 00
Q ss_pred CCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 642 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 642 ~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
... ..+.| +|++||++|++||+.++++++++|++. |.++++++||+.||++.. ++...+.+||
T Consensus 146 ~~~---~~~~P-vl~~hG~~D~~vp~~~~~~~~~~L~~~-------g~~v~~~~ypg~gH~i~~------~el~~i~~wL 208 (210)
T 4h0c_A 146 KGD---FKQTP-VFISTGNPDPHVPVSRVQESVTILEDM-------NAAVSQVVYPGRPHTISG------DEIQLVNNTI 208 (210)
T ss_dssp CBC---CTTCE-EEEEEEESCTTSCHHHHHHHHHHHHHT-------TCEEEEEEEETCCSSCCH------HHHHHHHHTT
T ss_pred hhh---ccCCc-eEEEecCCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCCcCH------HHHHHHHHHH
Confidence 001 02334 999999999999999999999999999 999999999999998852 3445567776
Q ss_pred H
Q psy4818 722 M 722 (734)
Q Consensus 722 ~ 722 (734)
.
T Consensus 209 ~ 209 (210)
T 4h0c_A 209 L 209 (210)
T ss_dssp T
T ss_pred c
Confidence 4
No 64
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.81 E-value=6.5e-19 Score=177.69 Aligned_cols=207 Identities=15% Similarity=0.048 Sum_probs=155.5
Q ss_pred CCceEEEEEEEcC--CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC
Q psy4818 455 TLFQTKQVYFRSK--DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 532 (734)
Q Consensus 455 ~~~~~~~~~~~s~--dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~ 532 (734)
..+..+.+.+++. ++. ..+.+++|... ..++.|+||++||..+... .|.. +...|+++||.|+++|+||.+..
T Consensus 21 g~~~~~~~~~~~~~~~~~-~~~~l~~p~~~-~~~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~g~g~~ 95 (262)
T 1jfr_A 21 GPYATSQTSVSSLVASGF-GGGTIYYPTST-ADGTFGAVVISPGFTAYQS--SIAW-LGPRLASQGFVVFTIDTNTTLDQ 95 (262)
T ss_dssp CSSCEEEEEECTTTCSSS-CCEEEEEESCC-TTCCEEEEEEECCTTCCGG--GTTT-HHHHHHTTTCEEEEECCSSTTCC
T ss_pred CCCCccceEecceeccCC-CceeEEecCCC-CCCCCCEEEEeCCcCCCch--hHHH-HHHHHHhCCCEEEEeCCCCCCCC
Confidence 4566777777765 343 35788888752 2467899999999865543 2333 45667778999999999996643
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHH----cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
.. ...+|+.++++++.+ ...++.++++++|+|+||++++.++.++|+ ++++|+.+|+..
T Consensus 96 ~~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---- 158 (262)
T 1jfr_A 96 PD------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---- 158 (262)
T ss_dssp HH------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----
T ss_pred Cc------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----
Confidence 21 124688899999987 344678899999999999999999999998 799998777431
Q ss_pred cccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHHHHHHhhhCCCCCC
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGSLPYQ 687 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~~~~~~~~~ 687 (734)
...+.. ++.| +|+++|++|..+++.+ +.++++.|+ .
T Consensus 159 ------------------------------~~~~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~~l~-~------- 195 (262)
T 1jfr_A 159 ------------------------------DKTWPE----LRTP-TLVVGADGDTVAPVATHSKPFYESLP-G------- 195 (262)
T ss_dssp ------------------------------CCCCTT----CCSC-EEEEEETTCSSSCTTTTHHHHHHHSC-T-------
T ss_pred ------------------------------cccccc----cCCC-EEEEecCccccCCchhhHHHHHHHhh-c-------
Confidence 112222 4555 9999999999999998 999998884 2
Q ss_pred CCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 688 KNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+.++++++++++||.+..... .+....+.+||.++++..
T Consensus 196 ~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 196 SLDKAYLELRGASHFTPNTSD--TTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp TSCEEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCceEEEeCCCCcCCcccch--HHHHHHHHHHHHHHhcCc
Confidence 467899999999998865432 366778899999999754
No 65
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.81 E-value=7e-19 Score=177.86 Aligned_cols=232 Identities=15% Similarity=0.047 Sum_probs=155.5
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
.++..+.+.||.++++.++.|++ .++.|+||++||+... .....|...+..+|++. |.|+++|+||+++...
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH---
T ss_pred ceEEEEecCCcEEEEEEEEccCC---CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc---
Confidence 34567788899999999999874 3578999999998622 22333445567788764 9999999998765321
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc-----
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----- 612 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----- 612 (734)
...++|+.++++++.++ .+.++++|+|+|+||++++.++.+ +.++++|+.+|+.++.......
T Consensus 76 --------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 76 --------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp --------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred --------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 22467999999999887 677899999999999999999988 6789999999988653211000
Q ss_pred ------cCcccccc------cCCCCCHHHHHH-------------HHhCCc----c----CCCCCCCCCccCCcEEEEec
Q psy4818 613 ------IAYYSESE------FGSPNNKTHFHN-------------LLSYSP----L----HNIKVPPNNTQYPATLVLTG 659 (734)
Q Consensus 613 ------~~~~~~~~------~g~~~~~~~~~~-------------~~~~sp----~----~~~~~p~~~~~~P~~Li~~g 659 (734)
........ ............ +..... + ..+.. +. | +||++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-P-~lii~G 217 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT----LP-P-VFIAHC 217 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTT----CC-C-EEEEEE
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhcc----CC-C-EEEEec
Confidence 00000000 000000000000 100000 0 00121 44 4 999999
Q ss_pred CCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHH-hHHHHHHHHHHHHHHcC
Q psy4818 660 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMK-SIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 660 ~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l~ 726 (734)
++|..||+.++.++++++. ...+++++++||.+...... ..+....+.+||.++|.
T Consensus 218 ~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 218 NGDYDVPVEESEHIMNHVP-----------HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp TTCSSSCTHHHHHHHTTCS-----------SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHhcC-----------CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999998887776543 34689999999997654321 24677789999999874
No 66
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.81 E-value=5e-19 Score=182.93 Aligned_cols=203 Identities=16% Similarity=0.071 Sum_probs=152.4
Q ss_pred ceEEEEEEEc--CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 457 FQTKQVYFRS--KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 457 ~~~~~~~~~s--~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
+......+.. .+|.. .+.+++|... .+.|+||++||+.+... .|. .+...|+++||.|+++|+||.|+...
T Consensus 67 ~~~~~~~~~~~~~~g~~-~~~~~~p~~~---~~~p~vv~~HG~~~~~~--~~~-~~~~~la~~G~~vv~~d~~g~g~s~~ 139 (306)
T 3vis_A 67 FSVSEERASRFGADGFG-GGTIYYPREN---NTYGAIAISPGYTGTQS--SIA-WLGERIASHGFVVIAIDTNTTLDQPD 139 (306)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESSC---SCEEEEEEECCTTCCHH--HHH-HHHHHHHTTTEEEEEECCSSTTCCHH
T ss_pred ccceeeeeeccccCCCc-ceEEEeeCCC---CCCCEEEEeCCCcCCHH--HHH-HHHHHHHhCCCEEEEecCCCCCCCcc
Confidence 3344444443 45543 4678888763 37899999999765433 232 34567778899999999999654321
Q ss_pred hhhhccccccCCCchhHHHHHHHHHHHc------CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 535 DWHNAGRLLKKQNCFDDFQAAAEYMINK------KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 535 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
...+|+.++++++.+. ..+|++|++++|+|+||.+++.++.++|+ ++++|+.+|+..
T Consensus 140 ------------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~---- 202 (306)
T 3vis_A 140 ------------SRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL---- 202 (306)
T ss_dssp ------------HHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----
T ss_pred ------------hHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC----
Confidence 1236899999999887 67889999999999999999999999997 788888877442
Q ss_pred cccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCCh-HHHHHHHHHHhhhCCCCCC
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-HSYKFIATLQEKIGSLPYQ 687 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~-~~~~~~~~L~~~~~~~~~~ 687 (734)
...+.. ++.| +|+++|++|..+++. ++..++++++..
T Consensus 203 ------------------------------~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~l~~~------- 240 (306)
T 3vis_A 203 ------------------------------NKSWRD----ITVP-TLIIGAEYDTIASVTLHSKPFYNSIPSP------- 240 (306)
T ss_dssp ------------------------------CCCCTT----CCSC-EEEEEETTCSSSCTTTTHHHHHHTCCTT-------
T ss_pred ------------------------------cccccc----CCCC-EEEEecCCCcccCcchhHHHHHHHhccC-------
Confidence 011122 4455 999999999999998 699999888765
Q ss_pred CCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 688 KNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
+ ++++++++++||++..... .+....+.+||.++|+..
T Consensus 241 ~-~~~~~~~~g~gH~~~~~~~--~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 241 T-DKAYLELDGASHFAPNITN--KTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp S-CEEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred C-CceEEEECCCCccchhhch--hHHHHHHHHHHHHHccCc
Confidence 5 8899999999999865433 356678899999998754
No 67
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.80 E-value=1e-18 Score=183.52 Aligned_cols=245 Identities=14% Similarity=0.123 Sum_probs=163.1
Q ss_pred CCceEEEE-EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 455 TLFQTKQV-YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 455 ~~~~~~~~-~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+..+++ .+...||.+|.+.++.|.+ ++.|+||++||+.+... .|.. +...|+++||.|+++|+||.|...
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~g~~vi~~D~~G~G~S~ 102 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSE 102 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHTTTEEEEEECCTTSTTSC
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCC----CCCcEEEEECCCCcccc--hHHH-HHHHHHhCCCeEEEEcCCCCcCCC
Confidence 34444555 6778899999999998864 56799999999865544 3433 456677779999999999965443
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc-
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT- 612 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~- 612 (734)
.. ...........+|+.+++++|..+ .+..+++|+|+|+||++++.++.++|++++++|+.+|+.+........
T Consensus 103 ~~---~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 177 (342)
T 3hju_A 103 GE---RMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTF 177 (342)
T ss_dssp SS---TTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHH
T ss_pred Cc---CCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHH
Confidence 11 111111123367889999998776 456789999999999999999999999999999999976543211000
Q ss_pred -----------cCc----ccccccCCCCCHHHHHHHHhCCcc----------------------CCCCCCCCCccCCcEE
Q psy4818 613 -----------IAY----YSESEFGSPNNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATL 655 (734)
Q Consensus 613 -----------~~~----~~~~~~g~~~~~~~~~~~~~~sp~----------------------~~~~~p~~~~~~P~~L 655 (734)
... .....+. ....+....+. ..|+ ..+.. ++.| +|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-vl 250 (342)
T 3hju_A 178 KVLAAKVLNLVLPNLSLGPIDSSVL-SRNKTEVDIYN-SDPLICRAGLKVCFGIQLLNAVSRVERALPK----LTVP-FL 250 (342)
T ss_dssp HHHHHHHHHHHCTTCBCCCCCGGGS-CSCHHHHHHHH-TCTTCCCSCCBHHHHHHHHHHHHHHHHHGGG----CCSC-EE
T ss_pred HHHHHHHHHHhccccccCccccccc-ccchHHHHHHh-cCcccccccccHHHHHHHHHHHHHHHHHHHh----CCcC-EE
Confidence 000 0000000 01111111111 1111 12222 5666 99
Q ss_pred EEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHHcCC
Q psy4818 656 VLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 656 i~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~l~~ 727 (734)
+++|++|..|++.++.++++.+. +..+++++++++||.+..... ...+....+++||.+++..
T Consensus 251 ii~G~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 251 LLQGSADRLCDSKGAYLLMELAK---------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCC---------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCcccChHHHHHHHHHcC---------CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 99999999999988888877664 225789999999998764422 2346667789999998853
No 68
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.80 E-value=2.8e-19 Score=182.03 Aligned_cols=239 Identities=13% Similarity=0.104 Sum_probs=159.4
Q ss_pred ceEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccH--HHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 457 FQTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 457 ~~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
...+.+++.|. +|.+++++ +.|++ .|+||++||+........|.. .+.+++++.|++|+++|.++++.|.
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~ 81 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT 81 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTS
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccC
Confidence 35677777775 68889998 77764 289999999853222222322 2346677789999999998765442
Q ss_pred chhhhccccccCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK- 610 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~- 610 (734)
+|..... ..+++++ ..+.++.++.-+++++++|+|+||||++++.++.++|++|+++|+.+|..++.....
T Consensus 82 -~~~~~~~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 155 (280)
T 1r88_A 82 -NWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTN 155 (280)
T ss_dssp -BCSSCTT-----CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHH
T ss_pred -CCCCCCC-----CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccch
Confidence 2222111 1333332 234444443447888999999999999999999999999999999999887543110
Q ss_pred c-------cc-CcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCc--cCCcEEEEe----cCCCCC-------CCChH
Q psy4818 611 F-------TI-AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLT----GDHDDR-------VPPLH 669 (734)
Q Consensus 611 ~-------~~-~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~--~~P~~Li~~----g~~D~~-------v~~~~ 669 (734)
. .. +..+...||.+.. ..+.+.+|+.+++. . +-+|++|.+ |+.|.+ |++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~----~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~ 227 (280)
T 1r88_A 156 GAIAAGMQQFGGVDTNGMWGAPQL----GRWKWHDPWVHASL----LAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGN 227 (280)
T ss_dssp HHHHHHHHHHHCCCTHHHHCCGGG----STTGGGCTTTTHHH----HHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHH
T ss_pred hhHHHHhhhccccchhhhcCCCch----hhhHhcCHHHHHHh----hhccCCeEEEEeccCCCCCCcccccchhHHHHHH
Confidence 0 00 0011122444421 12446677766543 3 224599999 999985 68899
Q ss_pred HHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 670 SYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+++++++|++. | .++++.++++++|.+.. ......+.+.||.+.|..
T Consensus 228 ~~~~~~~L~~~-------g~~~~~~~~~~~g~H~~~~----w~~~l~~~l~~~~~~~~~ 275 (280)
T 1r88_A 228 SRMFYNQYRSV-------GGHNGHFDFPASGDNGWGS----WAPQLGAMSGDIVGAIRH 275 (280)
T ss_dssp HHHHHHHHHHT-------TCCSEEEECCSSCCSSHHH----HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHC-------CCcceEEEecCCCCcChhH----HHHHHHHHHHHHHHHHhh
Confidence 99999999998 8 99999999889997642 234455677888877653
No 69
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.80 E-value=6.1e-19 Score=202.55 Aligned_cols=254 Identities=13% Similarity=0.106 Sum_probs=165.0
Q ss_pred CCCCCceEEEEEE-----EcCCCcE--EeEEEEEeccccCCCCCcEEEEec--CCCCCc---------C-----------
Q psy4818 452 FEPTLFQTKQVYF-----RSKDGTR--VPMYIIHRVGALRNRRNPVIIYGY--GGYGVS---------V----------- 502 (734)
Q Consensus 452 ~~~~~~~~~~~~~-----~s~dg~~--i~~~~~~p~~~~~~~~~P~vv~~h--Gg~~~~---------~----------- 502 (734)
++......+.+++ +..||.+ |.+.+++|++ .++.|+||..| |+.+.. .
T Consensus 161 ~~~~~~~~e~~~ve~~v~~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~ 237 (763)
T 1lns_A 161 FDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHE 237 (763)
T ss_dssp SCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEE
T ss_pred cCCccceeeeeEEecCcccCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccc
Confidence 3333444455555 3579999 9999999987 36899999554 332110 0
Q ss_pred ------------------------Ccccc----HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHH
Q psy4818 503 ------------------------LPTFS----ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA 554 (734)
Q Consensus 503 ------------------------~~~~~----~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~ 554 (734)
...|. .....+++++||+|+++|+||.|+.+..+. .......+|+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~-----~~~~~e~~D~~a 312 (763)
T 1lns_A 238 IHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTA 312 (763)
T ss_dssp CCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCC-----CCCHHHHHHHHH
Confidence 01121 123466777899999999999776543321 122245789999
Q ss_pred HHHHHHHc--CC------------CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc----c--C
Q psy4818 555 AAEYMINK--KY------------TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----I--A 614 (734)
Q Consensus 555 ~~~~l~~~--~~------------~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~--~ 614 (734)
+++||..+ ++ .+.+||+++|+||||++++.++.++|+.++++|+.+|+.|+....... . +
T Consensus 313 ~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g 392 (763)
T 1lns_A 313 VIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGG 392 (763)
T ss_dssp HHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTT
T ss_pred HHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhccc
Confidence 99999743 11 245799999999999999999999999999999999998765432110 0 0
Q ss_pred c-ccc------cccCCCCCH-------HH-------------------HHHHHhCCccCCCCCCCCCccCCcEEEEecCC
Q psy4818 615 Y-YSE------SEFGSPNNK-------TH-------------------FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH 661 (734)
Q Consensus 615 ~-~~~------~~~g~~~~~-------~~-------------------~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~ 661 (734)
. .+. ..+...... +. ...+...+|..++.+ +++| +||+||.+
T Consensus 393 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~----I~~P-vLii~G~~ 467 (763)
T 1lns_A 393 FPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDK----VKAD-VLIVHGLQ 467 (763)
T ss_dssp CTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGG----CCSE-EEEEEETT
T ss_pred CCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhc----CCCC-EEEEEECC
Confidence 0 000 000000000 00 012234556666665 7888 99999999
Q ss_pred CCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 662 DDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 662 D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|..|++.++.+++++|+. +.+..+++ +++||....... ..+....+.+||.++|+..
T Consensus 468 D~~vp~~~a~~l~~al~~--------~~~~~l~i-~~~gH~~~~~~~-~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 468 DWNVTPEQAYNFWKALPE--------GHAKHAFL-HRGAHIYMNSWQ-SIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp CCSSCTHHHHHHHHHSCT--------TCCEEEEE-ESCSSCCCTTBS-SCCHHHHHHHHHHHHHTTC
T ss_pred CCCCChHHHHHHHHhhcc--------CCCeEEEE-eCCcccCccccc-hHHHHHHHHHHHHHHhcCC
Confidence 999999999999998863 23455555 567998643211 1345677899999999754
No 70
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.80 E-value=2.3e-18 Score=173.73 Aligned_cols=236 Identities=15% Similarity=0.166 Sum_probs=150.6
Q ss_pred eEEEEEE-EcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchh
Q psy4818 458 QTKQVYF-RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 536 (734)
Q Consensus 458 ~~~~~~~-~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~ 536 (734)
..+.+.+ .+.||.++....+.+++ ...|+||++||+.+....+.+. .+..+++++||.|+++|+||.|......
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 84 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ----DERPTCIWLGGYRSDMTGTKAL-EMDDLAASLGVGAIRFDYSGHGASGGAF 84 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS----TTSCEEEEECCTTCCTTSHHHH-HHHHHHHHHTCEEEEECCTTSTTCCSCG
T ss_pred CcceEEEeeccCcceEEEEeccCCC----CCCCeEEEECCCccccccchHH-HHHHHHHhCCCcEEEeccccCCCCCCcc
Confidence 3444555 55689888777665432 2479999999986554433222 3456676679999999999976554222
Q ss_pred hhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc---CC---CceeEEEEcCCcchhccccc
Q psy4818 537 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ---RP---ELYGAALILVGALDMLRFNK 610 (734)
Q Consensus 537 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~---~p---~~~~a~v~~~~~~d~~~~~~ 610 (734)
....++++...+..+++. +..++++++|+|+||++++.++.+ +| +.++++|+.+|..++.....
T Consensus 85 --------~~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~ 154 (270)
T 3llc_A 85 --------RDGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI 154 (270)
T ss_dssp --------GGCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT
T ss_pred --------ccccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh
Confidence 123344444444433332 126789999999999999999999 99 89999999999877544210
Q ss_pred c-ccCcc----------c--ccccC-CC--CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHH
Q psy4818 611 F-TIAYY----------S--ESEFG-SP--NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 674 (734)
Q Consensus 611 ~-~~~~~----------~--~~~~g-~~--~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~ 674 (734)
. ..... + ...+. .+ ........+........+.. ++.| +|+++|++|..|++.++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~v~~~~~~~~~ 229 (270)
T 3llc_A 155 EPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMID----TGCP-VHILQGMADPDVPYQHALKLV 229 (270)
T ss_dssp GGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCC----CCSC-EEEEEETTCSSSCHHHHHHHH
T ss_pred hhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhc----CCCC-EEEEecCCCCCCCHHHHHHHH
Confidence 0 00000 0 00111 11 11233344444444455554 6777 999999999999998888877
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
+.+. +..+++++++++||.+..... ..+....+.+||.+
T Consensus 230 ~~~~---------~~~~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 230 EHLP---------ADDVVLTLVRDGDHRLSRPQD-IDRMRNAIRAMIEP 268 (270)
T ss_dssp HTSC---------SSSEEEEEETTCCSSCCSHHH-HHHHHHHHHHHHC-
T ss_pred HhcC---------CCCeeEEEeCCCccccccccc-HHHHHHHHHHHhcC
Confidence 7653 335789999999997654433 23445556666643
No 71
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.80 E-value=2.3e-19 Score=183.07 Aligned_cols=213 Identities=16% Similarity=0.145 Sum_probs=135.2
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..+.||++||..++.. .|. .++..|+++||.|+++|+||.|........... ..-.+|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~~--~~~-~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~----~~~~~d~~~~~~~l~~~--- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQ--SMR-FLAEGFARAGYTVATPRLTGHGTTPAEMAASTA----SDWTADIVAAMRWLEER--- 118 (281)
T ss_dssp CSSEEEEEECCTTCCGG--GGH-HHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCH----HHHHHHHHHHHHHHHHH---
T ss_pred CCCceEEEECCCCCCHH--HHH-HHHHHHHHCCCEEEEECCCCCCCCCccccCCCH----HHHHHHHHHHHHHHHhC---
Confidence 45567889999655443 233 345778888999999999996644322111111 11256777788887654
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----ccc-cCccc------------ccccCCCCCH-
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----KFT-IAYYS------------ESEFGSPNNK- 627 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~~~-~~~~~------------~~~~g~~~~~- 627 (734)
.++++|+|+|+||++++.++.++|+.++++|+.+|...+.... .+. ....+ ..++..+..+
T Consensus 119 -~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
T 4fbl_A 119 -CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV 197 (281)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEG
T ss_pred -CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCch
Confidence 3689999999999999999999999999999999876443210 000 00000 0011111000
Q ss_pred HHHHHHHhCCc--cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC
Q psy4818 628 THFHNLLSYSP--LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT 705 (734)
Q Consensus 628 ~~~~~~~~~sp--~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 705 (734)
.....+..... -..+.. +++| +||++|++|..||++++.++++++. +..+++++++++||....
T Consensus 198 ~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~v~~~~~~~l~~~l~---------~~~~~l~~~~~~gH~~~~ 263 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPR----VKCP-ALIIQSREDHVVPPHNGELIYNGIG---------STEKELLWLENSYHVATL 263 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGG----CCSC-EEEEEESSCSSSCTHHHHHHHHHCC---------CSSEEEEEESSCCSCGGG
T ss_pred HHHHHHHHhhhhccccccc----cCCC-EEEEEeCCCCCcCHHHHHHHHHhCC---------CCCcEEEEECCCCCcCcc
Confidence 00111100000 011222 6667 9999999999999999988888764 346789999999998654
Q ss_pred chHHhHHHHHHHHHHHHHH
Q psy4818 706 PLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 706 ~~~~~~~~~~~~~~fl~~~ 724 (734)
... ..+..+.+.+||.+|
T Consensus 264 e~~-~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 264 DND-KELILERSLAFIRKH 281 (281)
T ss_dssp STT-HHHHHHHHHHHHHTC
T ss_pred ccC-HHHHHHHHHHHHHhC
Confidence 322 235677889999875
No 72
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.79 E-value=5.4e-19 Score=178.21 Aligned_cols=201 Identities=13% Similarity=0.081 Sum_probs=145.6
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCC-cCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
...++..++..+.+.++.|++ ++.|+||++|||... .....|.. +...|+++||.|+++|+||++++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~~~~~~~------ 108 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSH-LAVGALSKGWAVAMPSYELCPEVR------ 108 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGG-GGHHHHHTTEEEEEECCCCTTTSC------
T ss_pred ccccccCCCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHH-HHHHHHhCCCEEEEeCCCCCCCCC------
Confidence 334444566677888888865 568999999997422 22223433 345666779999999999976532
Q ss_pred cccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC------CCceeEEEEcCCcchhcccccccc
Q psy4818 540 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRFNKFTI 613 (734)
Q Consensus 540 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~ 613 (734)
.....+|+.++++++..+.. ++++|+|+|+||++++.++.++ |+.++++|+.+|+.++......
T Consensus 109 -----~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~-- 178 (262)
T 2pbl_A 109 -----ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-- 178 (262)
T ss_dssp -----HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS--
T ss_pred -----hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh--
Confidence 11236789999999987643 7899999999999999999887 8899999999998876433221
Q ss_pred CcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEE
Q psy4818 614 AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL 693 (734)
Q Consensus 614 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 693 (734)
.+...++. .. ..+...+|...+.. ++.| +|+++|++|..|++.++.+++++++ +++
T Consensus 179 --~~~~~~~~--~~---~~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~------------~~~ 234 (262)
T 2pbl_A 179 --SMNEKFKM--DA---DAAIAESPVEMQNR----YDAK-VTVWVGGAERPAFLDQAIWLVEAWD------------ADH 234 (262)
T ss_dssp --TTHHHHCC--CH---HHHHHTCGGGCCCC----CSCE-EEEEEETTSCHHHHHHHHHHHHHHT------------CEE
T ss_pred --hhhhhhCC--CH---HHHHhcCcccccCC----CCCC-EEEEEeCCCCcccHHHHHHHHHHhC------------CeE
Confidence 11111111 11 23456778777665 6666 9999999999999999999988875 378
Q ss_pred EEeCCCCCCCCCc
Q psy4818 694 RVEQDAGHGQGTP 706 (734)
Q Consensus 694 ~~~~~~gH~~~~~ 706 (734)
++++++||.....
T Consensus 235 ~~~~~~~H~~~~~ 247 (262)
T 2pbl_A 235 VIAFEKHHFNVIE 247 (262)
T ss_dssp EEETTCCTTTTTG
T ss_pred EEeCCCCcchHHh
Confidence 9999999987643
No 73
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.79 E-value=2.3e-18 Score=181.18 Aligned_cols=252 Identities=13% Similarity=0.085 Sum_probs=161.8
Q ss_pred CCCceEEEEEEEcCC--C--cEEeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccc----cHHHHHHHH-hcCeEEEE
Q psy4818 454 PTLFQTKQVYFRSKD--G--TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTF----SISRCMFLR-HFNGIYAI 523 (734)
Q Consensus 454 ~~~~~~~~~~~~s~d--g--~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~----~~~~~~~l~-~~G~~v~~ 523 (734)
+......++.|.+.| | ..+.++++.|++. .++.|+|++.||..... ..+++ ...+...|+ ++||+|++
T Consensus 38 ~~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~ 115 (377)
T 4ezi_A 38 HYDLQLYKINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVM 115 (377)
T ss_dssp CCCEEEEEEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEE
T ss_pred CCCcEEEEEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEE
Confidence 445678899998876 4 4577999999873 46789999999976321 12221 112344455 78999999
Q ss_pred EecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHhcCC----C-ceeEEE
Q psy4818 524 PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRP----E-LYGAAL 597 (734)
Q Consensus 524 ~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p----~-~~~a~v 597 (734)
+|+||.|+.+...+...........+.|.+.++..+.+. +..+.+|++++|+|+||+++++++.+.| + .+++++
T Consensus 116 ~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~ 195 (377)
T 4ezi_A 116 PDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVA 195 (377)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEE
T ss_pred eCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEE
Confidence 999997766531111000011112344555555544443 5557789999999999999999987654 3 578999
Q ss_pred EcCCcchhccccccccC------ccc-----------ccccC------CCC-----------------------------
Q psy4818 598 ILVGALDMLRFNKFTIA------YYS-----------ESEFG------SPN----------------------------- 625 (734)
Q Consensus 598 ~~~~~~d~~~~~~~~~~------~~~-----------~~~~g------~~~----------------------------- 625 (734)
+.++..|+........+ ..+ ...|. ++.
T Consensus 196 ~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 4ezi_A 196 PGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLI 275 (377)
T ss_dssp EESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGG
T ss_pred ecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHH
Confidence 99988776533211000 000 00000 000
Q ss_pred -------------CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 626 -------------NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 626 -------------~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
++...+.+.+.+... . ..+.| +||+||.+|.+||+.++.++++++++. |. ++
T Consensus 276 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~---~---~~~~P-vli~hG~~D~~Vp~~~~~~l~~~l~~~-------G~-v~ 340 (377)
T 4ezi_A 276 FQPKFSNGIISKTDRNTEILKINFNHYD---F---KPTAP-LLLVGTKGDRDVPYAGAEMAYHSFRKY-------SD-FV 340 (377)
T ss_dssp BCHHHHHHHHTTCSTTHHHHHHHHCCCC---S---CCSSC-EEEEECTTCSSSCHHHHHHHHHHHHTT-------CS-CE
T ss_pred hchhhhhhcccccchHHHHHHHHhcccC---C---CCCCC-EEEEecCCCCCCCHHHHHHHHHHHHhc-------CC-EE
Confidence 000011111111111 1 14566 999999999999999999999999988 88 99
Q ss_pred EEEeCC--CCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 693 LRVEQD--AGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 693 ~~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++.|++ .+|.... .....+++.||.++++.
T Consensus 341 ~~~~~~~~~~H~~~~-----~~~~~~~~~wl~~~~~~ 372 (377)
T 4ezi_A 341 WIKSVSDALDHVQAH-----PFVLKEQVDFFKQFERQ 372 (377)
T ss_dssp EEEESCSSCCTTTTH-----HHHHHHHHHHHHHHHTS
T ss_pred EEEcCCCCCCccChH-----HHHHHHHHHHHHHhhcc
Confidence 999999 9998642 35567789999999874
No 74
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.79 E-value=1.5e-18 Score=186.59 Aligned_cols=235 Identities=12% Similarity=0.041 Sum_probs=158.6
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
....+++.++. +|..|+++++.|.+ .++.|+||++||..+.... .+ ..+...++++||.|+++|+||.|+...
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~~~-~~-~~~~~~l~~~G~~V~~~D~~G~G~s~~- 237 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQTD-MW-RLFRDHLAKHDIAMLTVDMPSVGYSSK- 237 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCS---SSCEEEEEEECCTTSCGGG-GH-HHHHHTTGGGTCEEEEECCTTSGGGTT-
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCC---CCCCCEEEEECCCCccHHH-HH-HHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 34678888887 78899999999976 4678999999997544322 22 224456666799999999999654321
Q ss_pred hhhccccccCCCchhH-HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc---c
Q psy4818 536 WHNAGRLLKKQNCFDD-FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK---F 611 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~ 611 (734)
. ....++++ ..++++++.....+|++||+|+|+|+||++++.++.++|+.++++|+.+|+++...... .
T Consensus 238 --~-----~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~ 310 (415)
T 3mve_A 238 --Y-----PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQ 310 (415)
T ss_dssp --S-----CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHT
T ss_pred --C-----CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHH
Confidence 1 11122333 35678888877778999999999999999999999988999999999999864321100 0
Q ss_pred ccCcc----cccccCCC-CC-HHHHHHHHhCCccCC----CCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q psy4818 612 TIAYY----SESEFGSP-NN-KTHFHNLLSYSPLHN----IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 681 (734)
Q Consensus 612 ~~~~~----~~~~~g~~-~~-~~~~~~~~~~sp~~~----~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~ 681 (734)
..... +...+|.. .. .+....+..+++... +.. +++| +||++|++|..||+.++..+++ .
T Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-vLii~G~~D~~vp~~~~~~l~~----~- 380 (415)
T 3mve_A 311 QMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRK----TKVP-ILAMSLEGDPVSPYSDNQMVAF----F- 380 (415)
T ss_dssp TSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSC----BSSC-EEEEEETTCSSSCHHHHHHHHH----T-
T ss_pred HhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCC----CCCC-EEEEEeCCCCCCCHHHHHHHHH----h-
Confidence 00000 00112322 12 222334445555432 222 6777 9999999999999988876665 3
Q ss_pred CCCCCCCCcEEEEEeCC-CCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 682 GSLPYQKNPLLLRVEQD-AGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 682 ~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+.+++++++++ .+|. ...+....+.+||.++|.
T Consensus 381 ------~~~~~l~~i~g~~~h~------~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 381 ------STYGKAKKISSKTITQ------GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ------BTTCEEEEECCCSHHH------HHHHHHHHHHHHHHHHHT
T ss_pred ------CCCceEEEecCCCccc------chHHHHHHHHHHHHHHhc
Confidence 55678899998 2221 224667788999999875
No 75
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.79 E-value=1.2e-18 Score=181.82 Aligned_cols=222 Identities=12% Similarity=0.087 Sum_probs=148.5
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchh
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 550 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~ 550 (734)
+.++++.|.+ ++.|+||++|||.... ....|......+..+.||.|+++||||+++.. + ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~--~---------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH--I---------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC--H---------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC--c---------hHHHH
Confidence 6677788764 4579999999985332 22333333333333459999999999976532 1 12378
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchhccccccccCcccccccCCCCC
Q psy4818 551 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 626 (734)
Q Consensus 551 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 626 (734)
|+.+++++|.++ +++++++|+|+|+||++++.++.++|+. ++++|+.+|+.++.......... . ........
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~-~-~~~~~~~~ 224 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA-L-IEQDAVLS 224 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH-H-HHHCSSCC
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh-h-cccCcccC
Confidence 999999999887 7889999999999999999999887765 89999999988764321110000 0 00000001
Q ss_pred HHHHH----HHH--------hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy4818 627 KTHFH----NLL--------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 694 (734)
Q Consensus 627 ~~~~~----~~~--------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 694 (734)
..... .+. ..+|+...- ...||+||++|++|. +..++.+++++|++. +.+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~-------~~~~~~~ 290 (326)
T 3d7r_A 225 QFGVNEIMKKWANGLPLTDKRISPINGTI-----EGLPPVYMFGGGREM--THPDMKLFEQMMLQH-------HQYIEFY 290 (326)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTTSGGGSCC-----TTCCCEEEEEETTST--THHHHHHHHHHHHHT-------TCCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCCeECcccCCc-----ccCCCEEEEEeCccc--chHHHHHHHHHHHHC-------CCcEEEE
Confidence 11111 111 123332211 234569999999995 456788899999988 8899999
Q ss_pred EeCCCCCCCCCc-hHHhHHHHHHHHHHHHHHcC
Q psy4818 695 VEQDAGHGQGTP-LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 695 ~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~ 726 (734)
+++++||.+... .....+....+.+||.+++.
T Consensus 291 ~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 291 DYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp EETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred EeCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 999999987541 12235677788999987764
No 76
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.78 E-value=5.7e-18 Score=167.40 Aligned_cols=217 Identities=16% Similarity=0.060 Sum_probs=151.0
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcc------
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG------ 540 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~------ 540 (734)
.+| +++.++.|.+ +.|+||++||..+... .|. .+...|+++||.|+++|+||.|.....+....
T Consensus 10 ~~g--~~~~~~~~~~-----~~~~vv~~hG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (238)
T 1ufo_A 10 LAG--LSVLARIPEA-----PKALLLALHGLQGSKE--HIL-ALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE 79 (238)
T ss_dssp ETT--EEEEEEEESS-----CCEEEEEECCTTCCHH--HHH-HTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHH
T ss_pred cCC--EEEEEEecCC-----CccEEEEECCCcccch--HHH-HHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhh
Confidence 355 5566777754 6799999999865432 222 23345666799999999999665432211110
Q ss_pred -ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccccc
Q psy4818 541 -RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSES 619 (734)
Q Consensus 541 -~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 619 (734)
.........+|+.++++++.+.+. ++++++|+|+||.+++.++.++|+.++++++..+..... ... .
T Consensus 80 ~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~--------~ 147 (238)
T 1ufo_A 80 EVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK-LPQ--------G 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCC-CCT--------T
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccch-hhh--------h
Confidence 000011235788888888876654 789999999999999999999999888888776643211 100 0
Q ss_pred ccCCCCCHHHHHHHHhCCccCCCCCCCCCc-cCCcEEEEecCCCCCCCChHHHHHHHHHH-hhhCCCCCCCC-cEEEEEe
Q psy4818 620 EFGSPNNKTHFHNLLSYSPLHNIKVPPNNT-QYPATLVLTGDHDDRVPPLHSYKFIATLQ-EKIGSLPYQKN-PLLLRVE 696 (734)
Q Consensus 620 ~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~-~~P~~Li~~g~~D~~v~~~~~~~~~~~L~-~~~~~~~~~~~-~~~~~~~ 696 (734)
.+..| +....+..+++...+.. + +.| +|+++|++|..|++.++.++++.++ +. +. +++++++
T Consensus 148 ~~~~~---~~~~~~~~~~~~~~~~~----~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 212 (238)
T 1ufo_A 148 QVVED---PGVLALYQAPPATRGEA----YGGVP-LLHLHGSRDHIVPLARMEKTLEALRPHY-------PEGRLARFVE 212 (238)
T ss_dssp CCCCC---HHHHHHHHSCGGGCGGG----GTTCC-EEEEEETTCTTTTHHHHHHHHHHHGGGC-------TTCCEEEEEE
T ss_pred hccCC---cccchhhcCChhhhhhh----ccCCc-EEEEECCCCCccCcHHHHHHHHHHhhcC-------CCCceEEEEe
Confidence 01222 22455666777776664 5 666 9999999999999999999999998 66 66 7899999
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 697 QDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 697 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+++||.+.. +....+.+||.++|+
T Consensus 213 ~~~~H~~~~------~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 213 EGAGHTLTP------LMARVGLAFLEHWLE 236 (238)
T ss_dssp TTCCSSCCH------HHHHHHHHHHHHHHH
T ss_pred CCCCcccHH------HHHHHHHHHHHHHHh
Confidence 999998742 445567899988874
No 77
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.78 E-value=2e-18 Score=167.69 Aligned_cols=185 Identities=11% Similarity=0.020 Sum_probs=132.1
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc--------ccc--ccCCCchhHHHH
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA--------GRL--LKKQNCFDDFQA 554 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~--------~~~--~~~~~~~~D~~~ 554 (734)
+++.| ||++||..+.... |. .+...|+ .|+.|+.+|.++....+..|+.. +.. .......+++.+
T Consensus 14 ~~~~p-vv~lHG~g~~~~~--~~-~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T 3og9_A 14 KDLAP-LLLLHSTGGDEHQ--LV-EIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTD 88 (209)
T ss_dssp TTSCC-EEEECCTTCCTTT--TH-HHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCCCCHHH--HH-HHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHH
Confidence 35678 9999997554432 33 3446666 59999999976543334555541 000 001123455556
Q ss_pred HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHH
Q psy4818 555 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLL 634 (734)
Q Consensus 555 ~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 634 (734)
.++.+.++..+|+++++|+|+|+||++++.++.++|+.++++|+.+|.......
T Consensus 89 ~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------------- 142 (209)
T 3og9_A 89 EVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------------- 142 (209)
T ss_dssp HHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------------
T ss_pred HHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------------
Confidence 666666665678999999999999999999999999999999999886531100
Q ss_pred hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHH
Q psy4818 635 SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEM 714 (734)
Q Consensus 635 ~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 714 (734)
..... ...| +|++||++|+.||++++.++++.|++. +.++++.+++ +||.+. .+..
T Consensus 143 -----~~~~~----~~~p-~li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~-~gH~~~------~~~~ 198 (209)
T 3og9_A 143 -----QTVQL----DDKH-VFLSYAPNDMIVPQKNFGDLKGDLEDS-------GCQLEIYESS-LGHQLT------QEEV 198 (209)
T ss_dssp -----CCCCC----TTCE-EEEEECTTCSSSCHHHHHHHHHHHHHT-------TCEEEEEECS-STTSCC------HHHH
T ss_pred -----ccccc----cCCC-EEEEcCCCCCccCHHHHHHHHHHHHHc-------CCceEEEEcC-CCCcCC------HHHH
Confidence 00111 3444 999999999999999999999999998 8899999998 799984 2445
Q ss_pred HHHHHHHHHH
Q psy4818 715 TDIYVFLMKS 724 (734)
Q Consensus 715 ~~~~~fl~~~ 724 (734)
..+.+||.++
T Consensus 199 ~~~~~~l~~~ 208 (209)
T 3og9_A 199 LAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 6678898764
No 78
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.78 E-value=9.3e-18 Score=173.24 Aligned_cols=228 Identities=14% Similarity=0.141 Sum_probs=148.3
Q ss_pred EEEEEEE---cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 459 TKQVYFR---SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 459 ~~~~~~~---s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
...+.|. +.+|.++.++++.|++. ..+.|+||++||+.+... .|...+...++++||+|+++|+|+.+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNGA--DYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCHH--HHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred CceEEecccCCCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCHH--HHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 3456666 67888999999999864 246799999999866542 2322345667778999999999965221111
Q ss_pred hhhccc--------cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC-ceeEEEEc-CCcchh
Q psy4818 536 WHNAGR--------LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALIL-VGALDM 605 (734)
Q Consensus 536 ~~~~~~--------~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~-~~~~d~ 605 (734)
|+..+. .......++|+.+++++|.++..+|++||+|+|+|+||++++.++.++|+ .++++|+. .|+.++
T Consensus 100 ~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~ 179 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTL 179 (304)
T ss_dssp HTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCC
T ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccccc
Confidence 221111 01123456889999999998877899999999999999999999999995 67777744 476554
Q ss_pred ccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCC-----------------Ch
Q psy4818 606 LRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP-----------------PL 668 (734)
Q Consensus 606 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~-----------------~~ 668 (734)
.... ..| .+|..... .+|...... ...| +|++||++|..+. ..
T Consensus 180 ~~~~-----~~~--~~~~~~~~--------~~~~~~~~~----~~~p-~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~ 239 (304)
T 3d0k_A 180 PTFE-----HRF--PEGLDGVG--------LTEDHLARL----LAYP-MTILAGDQDIATDDPNLPSEPAALRQGPHRYA 239 (304)
T ss_dssp SSTT-----SBT--TTSSBTTT--------CCHHHHHHH----HHSC-CEEEEETTCCCC--CCSCCSHHHHTTCSSHHH
T ss_pred CCcc-----ccC--ccccCCCC--------CCHHHHHhh----hcCC-EEEEEeCCCCCccccccccChhhhccCccHHH
Confidence 3221 011 11211100 011111111 3344 9999999998752 23
Q ss_pred HHHHHHHHHH----hhhCCCCCCCCc--EEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 669 HSYKFIATLQ----EKIGSLPYQKNP--LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 669 ~~~~~~~~L~----~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
.+..+++.++ +. |.+ ++++++|++||.+. .....+.+||.+.
T Consensus 240 ~~~~~~~~l~~~a~~~-------g~~~~~~~~~~pg~gH~~~-------~~~~~~~~~~~~~ 287 (304)
T 3d0k_A 240 RARHYYEAGQRAAAQR-------GLPFGWQLQVVPGIGHDGQ-------AMSQVCASLWFDG 287 (304)
T ss_dssp HHHHHHHHHHHHHHHH-------TCCCCCEEEEETTCCSCHH-------HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhc-------CCCcceEEEEeCCCCCchH-------HHHHHHHHHHhhh
Confidence 5667777776 55 666 89999999999873 2234466776543
No 79
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.78 E-value=5.8e-19 Score=179.27 Aligned_cols=231 Identities=12% Similarity=0.054 Sum_probs=149.7
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcC---eEEEEEecccCCCCC
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN---GIYAIPNIRGGGELG 533 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~rG~~~~g 533 (734)
..+.+.+.|. +|..+.++++.|+++++++++|+|+++||+........+......+.++.| ++|+.+++|+++.++
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~ 96 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFS 96 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCC
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCc
Confidence 4778888887 788999999999998767889999999998532111111111111223457 999999999865443
Q ss_pred ch-----hhhc---------ccc----ccC-CCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCc
Q psy4818 534 ED-----WHNA---------GRL----LKK-QNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 592 (734)
Q Consensus 534 ~~-----~~~~---------~~~----~~~-~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 592 (734)
.. +... ... ..+ ...+.+++ ..+.++.++..+|++|++|+|+|+||++++.++.++|++
T Consensus 97 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 97 GEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp HHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred ccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 21 1100 000 001 11344443 244555555557899999999999999999999999999
Q ss_pred eeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHH
Q psy4818 593 YGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYK 672 (734)
Q Consensus 593 ~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~ 672 (734)
|+++++.+|.+.+..... .. ..+.+ +...+ ... ... +++|+||+.|..+++.++.+
T Consensus 177 f~~~~~~s~~~~~~~~~~--------~~-----~~~~~--~~~~~----~~~----~~~-~~~l~~G~~D~~~~~~~~~~ 232 (275)
T 2qm0_A 177 FQNYFISSPSIWWNNKSV--------LE-----KEENL--IIELN----NAK----FET-GVFLTVGSLEREHMVVGANE 232 (275)
T ss_dssp CSEEEEESCCTTHHHHGG--------GG-----GTTHH--HHHHH----TCS----SCE-EEEEEEETTSCHHHHHHHHH
T ss_pred hceeEEeCceeeeChHHH--------HH-----HHHHH--Hhhhc----ccC----CCc-eEEEEeCCcccchhhHHHHH
Confidence 999999999875432100 00 00111 11100 111 233 49999999999999999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 673 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 673 ~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
++++|++. ...|.++++.++++++|+... .....+.+.||
T Consensus 233 ~~~~L~~~----~~~g~~~~~~~~~g~~H~~~~-----~~~l~~~l~~l 272 (275)
T 2qm0_A 233 LSERLLQV----NHDKLKFKFYEAEGENHASVV-----PTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHC----CCTTEEEEEEEETTCCTTTHH-----HHHHHHHHHHH
T ss_pred HHHHHHhc----ccCCceEEEEECCCCCccccH-----HHHHHHHHHHH
Confidence 99999532 112889999999999997532 23334456665
No 80
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.78 E-value=1.5e-19 Score=183.56 Aligned_cols=208 Identities=12% Similarity=0.065 Sum_probs=137.2
Q ss_pred CCCCcEEEEecCCCCCc---CCccccHHHHHHH----HhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHH
Q psy4818 485 NRRNPVIIYGYGGYGVS---VLPTFSISRCMFL----RHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE 557 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l----~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~ 557 (734)
.++.|+||++|||.... ....|.. +...| ++.||.|+++|+|++++.. ....++|+.++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~-~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQ-LANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNIT 105 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHH-HHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHH-HHHHHhhhhccCCcEEEEeecccCCCCC-----------CCcHHHHHHHHHH
Confidence 45789999999975332 2223433 44555 4679999999999865422 1234689999999
Q ss_pred HHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-----------------CCceeEEEEcCCcchhccccccccCc-ccc-
Q psy4818 558 YMINKKYTKPKYITIMGGSNGGLLVGACLNQR-----------------PELYGAALILVGALDMLRFNKFTIAY-YSE- 618 (734)
Q Consensus 558 ~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-----------------p~~~~a~v~~~~~~d~~~~~~~~~~~-~~~- 618 (734)
++.++ .++++++|+|+|+||++++.++.++ |+.++++|+.+|+.++.......... .+.
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 5778999999999999999999885 78899999999987764332100000 000
Q ss_pred cccCCCCCHHHHH-HHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 619 SEFGSPNNKTHFH-NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 619 ~~~g~~~~~~~~~-~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
..++.. .+.+. .....+|+.....+ .+..| +||++|++|..||+.++.+++++|+.. +.++++++++
T Consensus 184 ~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------~~~~~~~~~~ 251 (273)
T 1vkh_A 184 LAFPDG--IQMYEEEPSRVMPYVKKALS--RFSID-MHLVHSYSDELLTLRQTNCLISCLQDY-------QLSFKLYLDD 251 (273)
T ss_dssp HHCTTC--GGGCCCCHHHHHHHHHHHHH--HHTCE-EEEEEETTCSSCCTHHHHHHHHHHHHT-------TCCEEEEEEC
T ss_pred HHhccc--ccchhhcccccChhhhhccc--ccCCC-EEEEecCCcCCCChHHHHHHHHHHHhc-------CCceEEEEeC
Confidence 001110 00000 00011111000000 02334 999999999999999999999999988 8899999999
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 698 DAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 698 ~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
++||.+.... .+....+.+||
T Consensus 252 ~~gH~~~~~~---~~~~~~i~~fl 272 (273)
T 1vkh_A 252 LGLHNDVYKN---GKVAKYIFDNI 272 (273)
T ss_dssp CCSGGGGGGC---HHHHHHHHHTC
T ss_pred CCcccccccC---hHHHHHHHHHc
Confidence 9999864332 24455555554
No 81
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.78 E-value=3e-18 Score=173.52 Aligned_cols=206 Identities=17% Similarity=0.163 Sum_probs=142.3
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhc--CeEEEEEecc---cCCCCCchhhhcccc
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIR---GGGELGEDWHNAGRL 542 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~r---G~~~~g~~~~~~~~~ 542 (734)
.+.+...+..+|.. ++++.|+||++||..+... .|.. +.+.|..+ ++.+++|+-+ ...++|..|+.....
T Consensus 48 ~~~~~l~y~~~p~~--~~~~~plVI~LHG~G~~~~--~~~~-~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~ 122 (285)
T 4fhz_A 48 IMTRKLTFGRRGAA--PGEATSLVVFLHGYGADGA--DLLG-LAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWL 122 (285)
T ss_dssp CCCCCCCEEEEESC--TTCCSEEEEEECCTTBCHH--HHHT-THHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHH
T ss_pred cccccceeecCCCC--CCCCCcEEEEEcCCCCCHH--HHHH-HHHHHHHhCCCeEEEecCCCcccccCCCcccccccccc
Confidence 34444445555554 5678999999999532221 1211 22334333 8889988743 233467778642111
Q ss_pred cc--C-------CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccccc
Q psy4818 543 LK--K-------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI 613 (734)
Q Consensus 543 ~~--~-------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~ 613 (734)
.. . ....+++.+.++.++++.-+|++||+|+|+|+||++++.++.++|+.|+++|+.+|.+..
T Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~-------- 194 (285)
T 4fhz_A 123 DGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA-------- 194 (285)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC--------
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC--------
Confidence 10 0 112345556667766666689999999999999999999999999999999988764310
Q ss_pred CcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEE
Q psy4818 614 AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL 693 (734)
Q Consensus 614 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 693 (734)
++..... .+ .+.| +|++||+.|++||+.++.+++++|+++ |.++++
T Consensus 195 -------------~~~~~~~------~~-------~~~P-vl~~hG~~D~~Vp~~~~~~~~~~L~~~-------g~~~~~ 240 (285)
T 4fhz_A 195 -------------PERLAEE------AR-------SKPP-VLLVHGDADPVVPFADMSLAGEALAEA-------GFTTYG 240 (285)
T ss_dssp -------------HHHHHHH------CC-------CCCC-EEEEEETTCSSSCTHHHHHHHHHHHHT-------TCCEEE
T ss_pred -------------chhhhhh------hh-------hcCc-ccceeeCCCCCcCHHHHHHHHHHHHHC-------CCCEEE
Confidence 1111000 01 2334 999999999999999999999999999 999999
Q ss_pred EEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 694 RVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 694 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
++|++.||++. .++..++.+||.++|-
T Consensus 241 ~~y~g~gH~i~------~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 241 HVMKGTGHGIA------PDGLSVALAFLKERLP 267 (285)
T ss_dssp EEETTCCSSCC------HHHHHHHHHHHHHHCC
T ss_pred EEECCCCCCCC------HHHHHHHHHHHHHHCc
Confidence 99999999874 2446678999999984
No 82
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=6.8e-17 Score=172.72 Aligned_cols=261 Identities=10% Similarity=-0.014 Sum_probs=163.5
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccccc-CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~-~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
.++|||||++|||..+.+|. .+||++|+++|+..+.+...... ..+.|||||+.|+|...+
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---------------- 101 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---------------- 101 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT----------------
T ss_pred CccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC----------------
Confidence 38899999999999986554 68999999999876554333221 367999999999998842
Q ss_pred cEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC------------------CCCceEEEEeCCCCC
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN------------------TQGSDLHYFDLHSLP 286 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~------------------~~~~~i~~~d~~~~~ 286 (734)
..|+++++.++.. ..++..+...........+|||+.++...... .....|+++|+.++.
T Consensus 102 ~~l~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 102 RNLMRVDLATLEE--NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TEEEEEETTTCCE--EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CeEEEEECCCCcc--eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 2799999988753 34555443211112234599999988543211 122689999998842
Q ss_pred CCcccCCCCceeeeccccceEE-EEEe-cCCeEEEEeCCCC--CCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-e
Q psy4818 287 DGKISGKFPLKTVIPGMDHHHE-IIAN-NGPELIVKTTKNA--PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-V 361 (734)
Q Consensus 287 ~~~l~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~ 361 (734)
...+......... .|+| ||++|+|.++... ...+|+.++++++. .+.++.......+....+ +
T Consensus 180 ---------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 180 ---------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp ---------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECT
T ss_pred ---------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECC
Confidence 2334433222223 3999 9999999887431 24579999998765 455555442233333344 4
Q ss_pred eCCEEEEEEEeCCce--eEEEEECCCCceeeeeCCCCc--e----EEeeccCcccceEEEEEec-----CCCCceEEEEe
Q psy4818 362 ANNKLIVHYIQNVRS--VMDLHDLNTGKRLHSFPLDLG--Q----ITHISGRRKYNEVFYGFTS-----FLQPGTIYHCN 428 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~--~l~~~dl~~g~~~~~l~~~~g--~----v~~~~~~~d~~~l~~~~ss-----~~~P~~~~~~d 428 (734)
+++.|++....++.. .|++||+++|+. +.+....+ . .....++||++.+++..+. ......||++|
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 545687777666654 499999988875 33321111 1 1122467899888876532 24456899999
Q ss_pred CCCCcCCCCCCceeEEee
Q psy4818 429 IPENITDQDDFKPTIFRE 446 (734)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~ 446 (734)
+ +++ +.+.+..
T Consensus 327 ~-----~~~--~~~~l~~ 337 (388)
T 3pe7_A 327 M-----KNG--TQHRVAR 337 (388)
T ss_dssp T-----TTT--EEEEEEE
T ss_pred c-----cCC--ceEEecc
Confidence 9 555 4455544
No 83
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.78 E-value=8.1e-18 Score=165.89 Aligned_cols=201 Identities=16% Similarity=0.127 Sum_probs=137.9
Q ss_pred EEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC------Cchhhh-ccc---cccC
Q psy4818 476 IIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL------GEDWHN-AGR---LLKK 545 (734)
Q Consensus 476 ~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~------g~~~~~-~~~---~~~~ 545 (734)
++.|+. .++.|+||++||..+... .|. .+...|+++||.|+++|.+|.+.. ...|++ .+. ....
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~~~~~--~~~-~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~ 87 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLGDTGH--GWA-EAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 87 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSSSCHH--HHH-HHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBC
T ss_pred cccCCC---CCCCceEEEEecCCCccc--hHH-HHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccc
Confidence 556654 467899999999865432 232 234556656999999955541100 000100 000 0001
Q ss_pred ----CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccccccc
Q psy4818 546 ----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF 621 (734)
Q Consensus 546 ----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 621 (734)
....+|+.++++++.+ ..+|+++++++|+|+||++++.++.++|+.++++|+.+|..+......
T Consensus 88 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----------- 155 (232)
T 1fj2_A 88 ESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP----------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC-----------
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc-----------
Confidence 1123555666666655 456889999999999999999999999999999999999775432110
Q ss_pred CCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc--EEEEEeCCC
Q psy4818 622 GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP--LLLRVEQDA 699 (734)
Q Consensus 622 g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~ 699 (734)
. ....... ++.| +|+++|++|..|++.++.++++.|++. +.+ +++++++++
T Consensus 156 ---~------------~~~~~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~ 208 (232)
T 1fj2_A 156 ---Q------------GPIGGAN----RDIS-ILQCHGDCDPLVPLMFGSLTVEKLKTL-------VNPANVTFKTYEGM 208 (232)
T ss_dssp ---S------------SCCCSTT----TTCC-EEEEEETTCSSSCHHHHHHHHHHHHHH-------SCGGGEEEEEETTC
T ss_pred ---c------------ccccccc----CCCC-EEEEecCCCccCCHHHHHHHHHHHHHh-------CCCCceEEEEeCCC
Confidence 0 0011222 4556 999999999999999999999999988 644 999999999
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 700 GHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 700 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
||.+. .+....+.+||.++|..
T Consensus 209 ~H~~~------~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 209 MHSSC------QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CSSCC------HHHHHHHHHHHHHHSCC
T ss_pred CcccC------HHHHHHHHHHHHHhcCC
Confidence 99983 24457789999999864
No 84
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.78 E-value=1.3e-17 Score=171.07 Aligned_cols=237 Identities=15% Similarity=0.114 Sum_probs=156.1
Q ss_pred EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccc
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 542 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~ 542 (734)
.+.+.||.+|.+.++.|.+ ++.|+||++||..+... .|.. +...|+++||.|+++|+||.|..... ....
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~ 90 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSEGE---RMVV 90 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHHTTEEEEEECCTTSTTSCSS---TTCC
T ss_pred eEecCCCeEEEEEEeccCC----CCCeEEEEECCCCchhh--HHHH-HHHHHHhCCCcEEEeCCCCCCCCCCC---CCCC
Confidence 5778899999999988764 56899999999765543 3433 45667777999999999996654321 1001
Q ss_pred ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-------------
Q psy4818 543 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------------- 609 (734)
Q Consensus 543 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------------- 609 (734)
..-....+|+.++++++..+ .+.++++++|+|+||++++.++.++|++++++|+.+|........
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 168 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLN 168 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHH
Confidence 11122367888888888765 345689999999999999999999999999999999976542110
Q ss_pred ---ccccCcccccccCCCCCHHHHHHHHhCCcc----------------------CCCCCCCCCccCCcEEEEecCCCCC
Q psy4818 610 ---KFTIAYYSESEFGSPNNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATLVLTGDHDDR 664 (734)
Q Consensus 610 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~----------------------~~~~~p~~~~~~P~~Li~~g~~D~~ 664 (734)
...........+. .........+.. .+. ..+.. ++.| +|+++|++|..
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~ 241 (303)
T 3pe6_A 169 SVLPNLSSGPIDSSVL-SRNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALPK----LTVP-FLLLQGSADRL 241 (303)
T ss_dssp TTCCSCCCCCCCGGGT-CSCHHHHHHHHT-CTTSCCSCCCHHHHHHHHHHHHHHHHHGGG----CCSC-EEEEEETTCSS
T ss_pred HhcccccCCccchhhh-hcchhHHHHhcc-CccccccchhhhhHHHHHHHHHHHHHHhhc----CCCC-EEEEeeCCCCC
Confidence 0000000000000 011111111111 111 11222 5666 99999999999
Q ss_pred CCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHHcCC
Q psy4818 665 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 665 v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~l~~ 727 (734)
|++..+.++++.+. +..+++++++++||.+..... ...+....+++||.+++..
T Consensus 242 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 242 CDSKGAYLLMELAK---------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp BCHHHHHHHHHHCC---------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred CChHHHHHHHHhcc---------cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 99988888877664 225788999999998764432 2346677789999998864
No 85
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.77 E-value=5.7e-18 Score=186.90 Aligned_cols=241 Identities=14% Similarity=0.087 Sum_probs=162.8
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccc---------------------cHHHHHHHHh
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF---------------------SISRCMFLRH 516 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------------------~~~~~~~l~~ 516 (734)
..+.+.++..||.+|.+.+++|++ .++.|+||..||. +....+.+ .....++|++
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~py-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 115 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNK---DGKFPVVMSADTY-GKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP 115 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSS---SSCEEEEEEEESS-CTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG
T ss_pred EEEEEEEECCCCcEEEEEEEecCC---CCCCCEEEEecCC-CCCcccccccccccccccccccccccccccCCCHHHHHh
Confidence 567899999999999999999986 4789999998864 32221111 0012466778
Q ss_pred cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEE
Q psy4818 517 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA 596 (734)
Q Consensus 517 ~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~ 596 (734)
+||+|+++|+||.|+.+..|.. .+....+|+.++++||.++.+.+ .||+++|+|+||++++++++++|+.++|+
T Consensus 116 ~Gy~vv~~D~RG~G~S~G~~~~-----~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 116 NDYVVVKVALRGSDKSKGVLSP-----WSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GTCEEEEEECTTSTTCCSCBCT-----TSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred CCCEEEEEcCCCCCCCCCcccc-----CChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 8999999999998887765542 23356899999999999988887 89999999999999999999999999999
Q ss_pred EEcCCcchhccccccccC-------ccccc----ccC-CCCCHHHH----------HHHHhCCccCCCCCCCCCccCCcE
Q psy4818 597 LILVGALDMLRFNKFTIA-------YYSES----EFG-SPNNKTHF----------HNLLSYSPLHNIKVPPNNTQYPAT 654 (734)
Q Consensus 597 v~~~~~~d~~~~~~~~~~-------~~~~~----~~g-~~~~~~~~----------~~~~~~sp~~~~~~p~~~~~~P~~ 654 (734)
|+.+|+.|+.+......+ ..|.. .|. .+...+.. ++++..++ ++.+ ++.| +
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~----I~vP-v 262 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQ----IKTP-L 262 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGG----CCSC-E
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhh----CCCC-E
Confidence 999999997642111111 01110 010 01000011 12333333 3443 7888 9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 655 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 655 Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|+++|-.|..+....+.+.+++|+.. ...+++.+ .+|... .. ..+.....++||+++|+..
T Consensus 263 l~v~Gw~D~~~~~~g~l~~y~~l~~~---------~k~l~ih~-~~~~~~--~~-~~~~~~~~~~wfD~~LkG~ 323 (560)
T 3iii_A 263 LTCASWSTQGLHNRGSFEGFKQAASE---------EKWLYVHG-RKEWES--YY-ARENLERQKSFFDFYLKEE 323 (560)
T ss_dssp EEEEEGGGTTTTHHHHHHHHHHCCCS---------SEEEEEES-SCHHHH--HH-SHHHHHHHHHHHHHHTSCC
T ss_pred EEeCCcCCCcccchhHHHHHHhcccc---------CcEEEECC-CCCcCc--cc-ChhHHHHHHHHHHHHhCCC
Confidence 99999999766777787777776533 23455432 223210 01 1244566799999999754
No 86
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=8.1e-17 Score=172.11 Aligned_cols=303 Identities=8% Similarity=-0.021 Sum_probs=187.5
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEE
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 173 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~ 173 (734)
+.++|||.+++|.....+. ..||+.+..+++.+.+++.... .+..+.|||||++|+|.... ..|+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~------~~~~~~~spdg~~l~~~~~~-----~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGD------NTFGGFLSPDDDALFYVKDG-----RNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCB------CSSSCEECTTSSEEEEEETT-----TEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCC------CccceEEcCCCCEEEEEeCC-----CeEEEE
Confidence 6678999999999875433 4689888777777776653311 12257899999999998842 379999
Q ss_pred ECCCCCccccccccc-ccC--eeEEEcCCcEEEEEEEecCCCCCCCCc------ccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 174 DVDTGKDYPEVLKNV-KFP--SISWTHDHKGFFYNQYCDINGTADGTE------TTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 174 dl~~g~~~~~~~~~~-~~~--~~~wSpDg~~l~y~~~~~~~~~~~~~~------~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
|+++|+......... ... ...++|||+.|+....+.......... ........|+++++.++.. ..+..
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~ 185 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES--TVILQ 185 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE--EEEEE
T ss_pred ECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce--EEeec
Confidence 999998543222111 111 233489999988765432110000000 0012336899999988743 23333
Q ss_pred cCCCCeeEEEEEEec-CCcEEEEEEecCCC--CceEEEEeCCCCCCCcccCCCCceeeecccc--ceE-EEEEecCCeEE
Q psy4818 245 FPNGRSLGLHSEVTD-CGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPGMD--HHH-EIIANNGPELI 318 (734)
Q Consensus 245 ~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~--~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~--~~~-~~~s~dg~~l~ 318 (734)
.. .....+.||| ||++|++....... ..+||++|++++. ...+..... ... ..|+|||++|+
T Consensus 186 ~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---------~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 186 EN---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---------MRKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp ES---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---------CEESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CC---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---------eEEeeeCCCCcccccceECCCCCEEE
Confidence 32 2456899999 99999998764221 3689999998732 233333221 112 24999999999
Q ss_pred EEeCCCCC-CceEEEEecCCCCCCCceEeecCCCCce-e-E----EEEEeeCCEEEEEEEe------CCceeEEEEECCC
Q psy4818 319 VKTTKNAP-KGKVVTINLNNPCEKNWKTLIPEDENRT-L-D----VVAAVANNKLIVHYIQ------NVRSVMDLHDLNT 385 (734)
Q Consensus 319 ~~s~~~~~-~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~-~----~~~~~~~~~l~~~~~~------~~~~~l~~~dl~~ 385 (734)
|.++..+. ...|+++|+++++ .+.+.... ... . . ....++++.+++.... .+...|+++|+.+
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLE---NRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCC---EEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred EEecCCCCCcceEEEEecCCCc---eEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 88876443 3469999998876 23443322 100 0 0 0234555667766543 5567899999976
Q ss_pred CceeeeeCCCCc-----------eEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 386 GKRLHSFPLDLG-----------QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 386 g~~~~~l~~~~g-----------~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+. +.++...+ .+..+.++||++.+++.... ...+.+|.+++
T Consensus 330 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l 382 (388)
T 3pe7_A 330 GTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATL 382 (388)
T ss_dssp TEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEEC
T ss_pred Cce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEEC
Confidence 664 55654433 34567788999888877544 34567999998
No 87
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.76 E-value=5e-18 Score=172.98 Aligned_cols=243 Identities=13% Similarity=0.061 Sum_probs=157.2
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHH--HHHHHHhcCeEEEEEecccCCCCCc
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS--RCMFLRHFNGIYAIPNIRGGGELGE 534 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~rG~~~~g~ 534 (734)
..+.+++.|. .+.++.++ .|+.. .|+||++||+.+......|... ..+++++.|++|+++|.+|++.|.
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~-----~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~- 76 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG-----PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYT- 76 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS-----SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTS-
T ss_pred eEEEEEEECcccCceeEEE--EcCCC-----CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcccc-
Confidence 3556666665 45666665 34442 2589999998531222223221 235666679999999988755443
Q ss_pred hhhhccc--cccCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-
Q psy4818 535 DWHNAGR--LLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN- 609 (734)
Q Consensus 535 ~~~~~~~--~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~- 609 (734)
.|..... +......+++++ ..+.++.++.-+++++++|+|+||||++++.++.++|++|+++|+.+|..++....
T Consensus 77 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 156 (280)
T 1dqz_A 77 DWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWW 156 (280)
T ss_dssp BCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTH
T ss_pred CCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcch
Confidence 1211110 000233455543 34444444334677899999999999999999999999999999999988754310
Q ss_pred ----c----cccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCc--cCCcEEEEecCCCC--------------CC
Q psy4818 610 ----K----FTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLTGDHDD--------------RV 665 (734)
Q Consensus 610 ----~----~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~--~~P~~Li~~g~~D~--------------~v 665 (734)
. ......+...||.+... .+.+.+|+.++.. . +-+|++|.||+.|. .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~----l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~ 228 (280)
T 1dqz_A 157 PTLIGLAMNDSGGYNANSMWGPSSDP----AWKRNDPMVQIPR----LVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGL 228 (280)
T ss_dssp HHHHHHHHHHTTSCCHHHHHCSTTSH----HHHHTCTTTTHHH----HHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHH
T ss_pred hhhHHHHhhhccCcCHHHhcCCCCch----hhhhcCHHHHHHH----HHhcCCeEEEEeCCCCcccccccccchhhHHHH
Confidence 0 00001122335655432 3456788766543 2 22459999999997 57
Q ss_pred CChHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 666 PPLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 666 ~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++.++++++++|++. | .++++.++++++|.+.. ..+...+.+.||.+.||.
T Consensus 229 ~~~~~~~~~~~L~~~-------g~~~~~~~~~~~g~H~~~~----w~~~l~~~l~~l~~~l~~ 280 (280)
T 1dqz_A 229 TLRTNQTFRDTYAAD-------GGRNGVFNFPPNGTHSWPY----WNEQLVAMKADIQHVLNG 280 (280)
T ss_dssp HHHHHHHHHHHHHHT-------TCCSEEEECCSCCCSSHHH----HHHHHHHTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC-------CCCceEEEecCCCccChHH----HHHHHHHHHHHHHHHhCC
Confidence 889999999999998 8 99999999999997631 234556678999888763
No 88
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.76 E-value=5.7e-18 Score=168.02 Aligned_cols=197 Identities=13% Similarity=0.073 Sum_probs=136.7
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhc-----CeEEEEEecccC------CCCCchhhhcc-ccccC---CCch
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF-----NGIYAIPNIRGG------GELGEDWHNAG-RLLKK---QNCF 549 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~-----G~~v~~~~~rG~------~~~g~~~~~~~-~~~~~---~~~~ 549 (734)
+++.|+||++||..+.... |.. +...|..+ |+.|++++.++. ++.+..|+... ..... ...+
T Consensus 20 ~~~~p~vv~lHG~g~~~~~--~~~-~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 96 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDSGQG--LRM-WIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESI 96 (239)
T ss_dssp SCCCEEEEEECCTTCCHHH--HHH-HHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHH
T ss_pred CCCCcEEEEEecCCCchhh--HHH-HHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhH
Confidence 3578999999997554322 222 33444443 799999998642 33444554421 11111 1234
Q ss_pred hHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCC
Q psy4818 550 DDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 626 (734)
Q Consensus 550 ~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 626 (734)
+++...+..++++ ..+++++++|+|+|+||++++.++.++|+.++++|+.+|..+....
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------ 158 (239)
T 3u0v_A 97 DVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------ 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH------------------
Confidence 4445444444433 3478899999999999999999999999999999999987643211
Q ss_pred HHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc
Q psy4818 627 KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP 706 (734)
Q Consensus 627 ~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 706 (734)
....+. ... ...||+|++||++|..|++.++.+++++|++. +.++++++++++||.+.
T Consensus 159 --~~~~~~-------~~~----~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~g~~H~~~-- 216 (239)
T 3u0v_A 159 --VYQALQ-------KSN----GVLPELFQCHGTADELVLHSWAEETNSMLKSL-------GVTTKFHSFPNVYHELS-- 216 (239)
T ss_dssp --HHHHHH-------HCC----SCCCCEEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEETTCCSSCC--
T ss_pred --HHHHHH-------hhc----cCCCCEEEEeeCCCCccCHHHHHHHHHHHHHc-------CCcEEEEEeCCCCCcCC--
Confidence 111111 011 45567999999999999999999999999998 88999999999999986
Q ss_pred hHHhHHHHHHHHHHHHHHcCCC
Q psy4818 707 LMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 707 ~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
.+....+.+||.++|...
T Consensus 217 ----~~~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 217 ----KTELDILKLWILTKLPGE 234 (239)
T ss_dssp ----HHHHHHHHHHHHHHCC--
T ss_pred ----HHHHHHHHHHHHHhCCCc
Confidence 244667899999998643
No 89
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.76 E-value=1.3e-16 Score=186.04 Aligned_cols=296 Identities=8% Similarity=0.017 Sum_probs=191.9
Q ss_pred cCCcEEeCCeEEEEEE-cCCCCeeEEEEEeCCCCCeEEEeCCCCcCCC------------------CcEEEeeEEeCCCC
Q psy4818 93 YSAPQRQENNYFYFHN-KGLQNHSILYVQRNLTGSTEVFLDPNKLSKD------------------GTTALKLYAFSDNG 153 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~------------------~~~~~~~~~~SPDG 153 (734)
...+++||.+++|... +++.....||+.+..++..+.+++......+ +...+..++|||||
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 3455689999999987 5544456789888877887888875433200 00336789999999
Q ss_pred cEEEEEEeCCCCceEEEEEEECCCC---CcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEE
Q psy4818 154 KHFAYCLSKSGSDWNTLHIKDVDTG---KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 230 (734)
Q Consensus 154 ~~la~~~~~~g~~~~~l~v~dl~~g---~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (734)
++|+|+.. .+|++||+.++ +....+........++|||||+.|+|++. ..|+++
T Consensus 121 ~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-----------------~~i~~~ 177 (741)
T 2ecf_A 121 QRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-----------------RNLWVI 177 (741)
T ss_dssp SEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-----------------TEEEEE
T ss_pred CEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-----------------CcEEEE
Confidence 99999885 47999999998 65444333333468999999999999873 169999
Q ss_pred ECCCCCCCCeeEEecCCCCe--------------eEEEEEEecCCcEEEEEEecCCC-----------------------
Q psy4818 231 VLGTEQDKDIPVVEFPNGRS--------------LGLHSEVTDCGRYLLVSTSNNTQ----------------------- 273 (734)
Q Consensus 231 ~l~t~~~~~~~v~~~~~~~~--------------~~~~~~~SpDG~~l~~~~~~~~~----------------------- 273 (734)
++.++... .+........ ....+.|||||++|++.......
T Consensus 178 d~~~g~~~--~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 178 DLASGRQM--QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp ETTTTEEE--ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred ecCCCCEE--EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 98875321 1111111100 02468999999999998654311
Q ss_pred ------CceEEEEeCCC-CCCCcccCCCCceeeec---cccceEE-EEEecCCeEEEEeC-CCCCCceEEEEecCCCCCC
Q psy4818 274 ------GSDLHYFDLHS-LPDGKISGKFPLKTVIP---GMDHHHE-IIANNGPELIVKTT-KNAPKGKVVTINLNNPCEK 341 (734)
Q Consensus 274 ------~~~i~~~d~~~-~~~~~l~~~~~~~~l~~---~~~~~~~-~~s~dg~~l~~~s~-~~~~~~~l~~~d~~~~~~~ 341 (734)
...|+++|+.+ +... .+.. ....... .| |||+.|++.+. +.....+|+++|++++.
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~---------~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-- 323 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQ---------WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-- 323 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCE---------EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--
T ss_pred CCCCCCeeEEEEEECCCCCceE---------EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--
Confidence 13899999877 5321 1211 1111122 39 99999998764 44456789999998876
Q ss_pred CceEeecCCCCc---eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEee-ccCcccceEEEEEec
Q psy4818 342 NWKTLIPEDENR---TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI-SGRRKYNEVFYGFTS 417 (734)
Q Consensus 342 ~~~~l~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~-~~~~d~~~l~~~~ss 417 (734)
...++...... .+..+.+..++++++....++..+|+.+++ +|+ .+.++.....+..+ .++++++.+++..+.
T Consensus 324 -~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~-~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~ 400 (741)
T 2ecf_A 324 -QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDS-KGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGI 400 (741)
T ss_dssp -EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECS-SSC-EEESCCSSSCEEEEEEEETTTTEEEEEECS
T ss_pred -eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcC-CCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeC
Confidence 45554432111 122334444456777777777788999998 455 67777655555555 478999888776543
Q ss_pred CCCCc--eEEEEeC
Q psy4818 418 FLQPG--TIYHCNI 429 (734)
Q Consensus 418 ~~~P~--~~~~~d~ 429 (734)
..+. .+|.+++
T Consensus 401 -~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 401 -ESARESQIYAVPL 413 (741)
T ss_dssp -SCTTCBEEEEEET
T ss_pred -CCCceEEEEEEEc
Confidence 3333 4666665
No 90
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.75 E-value=2.2e-17 Score=159.50 Aligned_cols=199 Identities=17% Similarity=0.097 Sum_probs=140.0
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccH-HHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI-SRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
+...++ .||.+|.++++.|.+ +.|+||++||+.+... .|.. .+...|+++||.|+.+|+||.|.. +..
T Consensus 5 ~~~~~~-~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s---~~~ 73 (207)
T 3bdi_A 5 QEEFID-VNGTRVFQRKMVTDS-----NRRSIALFHGYSFTSM--DWDKADLFNNYSKIGYNVYAPDYPGFGRS---ASS 73 (207)
T ss_dssp EEEEEE-ETTEEEEEEEECCTT-----CCEEEEEECCTTCCGG--GGGGGTHHHHHHTTTEEEEEECCTTSTTS---CCC
T ss_pred eeEEEe-eCCcEEEEEEEeccC-----CCCeEEEECCCCCCcc--ccchHHHHHHHHhCCCeEEEEcCCccccc---Ccc
Confidence 444443 488999999998864 5789999999876544 3333 145667778999999999995433 211
Q ss_pred ccccccCCC-chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCccc
Q psy4818 539 AGRLLKKQN-CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 617 (734)
Q Consensus 539 ~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 617 (734)
. ...... .++++.+.+..++++ .+.++++++|+|+||.+++.++.++|+.++++|+.+|.... .
T Consensus 74 ~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~---------- 138 (207)
T 3bdi_A 74 E--KYGIDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S---------- 138 (207)
T ss_dssp T--TTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G----------
T ss_pred c--CCCCCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c----------
Confidence 1 111223 678888888877765 35579999999999999999999999999999999886211 0
Q ss_pred ccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 618 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 618 ~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
+ ...+ .+ ++.| +|+++|++|..+++..+.++.+.+. ++++.+++
T Consensus 139 ---~--------~~~~------~~-------~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~ 182 (207)
T 3bdi_A 139 ---L--------KGDM------KK-------IRQK-TLLVWGSKDHVVPIALSKEYASIIS-----------GSRLEIVE 182 (207)
T ss_dssp ---G--------HHHH------TT-------CCSC-EEEEEETTCTTTTHHHHHHHHHHST-----------TCEEEEET
T ss_pred ---h--------hHHH------hh-------ccCC-EEEEEECCCCccchHHHHHHHHhcC-----------CceEEEeC
Confidence 0 0111 12 4445 9999999999999988877776653 34788999
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 698 DAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 698 ~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++||.+..... .+....+.+||.
T Consensus 183 ~~~H~~~~~~~--~~~~~~i~~fl~ 205 (207)
T 3bdi_A 183 GSGHPVYIEKP--EEFVRITVDFLR 205 (207)
T ss_dssp TCCSCHHHHSH--HHHHHHHHHHHH
T ss_pred CCCCCccccCH--HHHHHHHHHHHh
Confidence 99998643222 345555677775
No 91
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.75 E-value=1.6e-17 Score=162.08 Aligned_cols=191 Identities=18% Similarity=0.170 Sum_probs=133.7
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHh--cCeEEEEEeccc------CCCCCchhhhc-ccc---ccCCCch---
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRG------GGELGEDWHNA-GRL---LKKQNCF--- 549 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG------~~~~g~~~~~~-~~~---~~~~~~~--- 549 (734)
.++.|+||++||..+.... |. .+...|++ +||.|+++|.+| +|..+..|++. +.+ ......+
T Consensus 11 ~~~~~~vv~~HG~~~~~~~--~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~ 87 (218)
T 1auo_A 11 KPADACVIWLHGLGADRYD--FM-PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVS 87 (218)
T ss_dssp SCCSEEEEEECCTTCCTTT--TH-HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHH
T ss_pred CCCCcEEEEEecCCCChhh--HH-HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHH
Confidence 3678999999998655433 33 34567776 799999998774 22222233321 111 0111223
Q ss_pred -hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh-cCCCceeEEEEcCCcchhccccccccCcccccccCCCCCH
Q psy4818 550 -DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN-QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNK 627 (734)
Q Consensus 550 -~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~ 627 (734)
+|+.+.++++.+ ..+++++++++|+|+||++++.++. ++|+.++++|+.+|..+.. .+..++ .
T Consensus 88 ~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~---------~~~~~~----~- 152 (218)
T 1auo_A 88 AKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF---------GDELEL----S- 152 (218)
T ss_dssp HHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC---------CTTCCC----C-
T ss_pred HHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc---------hhhhhh----h-
Confidence 344445555544 2468889999999999999999999 9999999999999987640 010000 0
Q ss_pred HHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCch
Q psy4818 628 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPL 707 (734)
Q Consensus 628 ~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (734)
... ++.| +|+++|++|..|+++++.++++.+++. |.++++++++ +||.+..
T Consensus 153 --------------~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~-~gH~~~~-- 203 (218)
T 1auo_A 153 --------------ASQ----QRIP-ALCLHGQYDDVVQNAMGRSAFEHLKSR-------GVTVTWQEYP-MGHEVLP-- 203 (218)
T ss_dssp --------------HHH----HTCC-EEEEEETTCSSSCHHHHHHHHHHHHTT-------TCCEEEEEES-CSSSCCH--
T ss_pred --------------hcc----cCCC-EEEEEeCCCceecHHHHHHHHHHHHhC-------CCceEEEEec-CCCccCH--
Confidence 011 4455 999999999999999999999999987 7889999999 9998742
Q ss_pred HHhHHHHHHHHHHHHHHcC
Q psy4818 708 MKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 708 ~~~~~~~~~~~~fl~~~l~ 726 (734)
+....+.+||.++|+
T Consensus 204 ----~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 204 ----QEIHDIGAWLAARLG 218 (218)
T ss_dssp ----HHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHhC
Confidence 345578899998763
No 92
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=7.3e-16 Score=166.35 Aligned_cols=242 Identities=14% Similarity=0.132 Sum_probs=164.6
Q ss_pred CCCcEEEEEEeCCCCc-eEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEE
Q psy4818 151 DNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 229 (734)
Q Consensus 151 PDG~~la~~~~~~g~~-~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (734)
+.+++|+|+....+.+ ..+|++||++++..............++|||||+.|+|...+. ....|++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~-------------~~~~i~~ 207 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-------------GRSALVI 207 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT-------------SSCEEEE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC-------------CCcEEEE
Confidence 4588999998764322 2789999998765443333333346899999999999998532 2348999
Q ss_pred EECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-
Q psy4818 230 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE- 308 (734)
Q Consensus 230 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~- 308 (734)
+++.++.. ..+... ......++|||||++|++..... ....||++|+.++. ...+.........
T Consensus 208 ~d~~tg~~--~~l~~~---~~~~~~~~~spdg~~la~~~~~~-g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 208 QTLANGAV--RQVASF---PRHNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQ---------IRQVTDGRSNNTEP 272 (415)
T ss_dssp EETTTCCE--EEEECC---SSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCC---------EEECCCCSSCEEEE
T ss_pred EECCCCcE--EEeecC---CCcccCEEEcCCCCEEEEEEecC-CCceEEEEECCCCC---------EEeCcCCCCcccce
Confidence 99987643 223222 23567899999999999877543 33689999998732 2333333223333
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCCceeEEEEECCCCc
Q psy4818 309 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 309 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
.|+|||+.|++.+++++ ..+|+.+|++++. ...+.... . .+..+.+ ++++.|++....++...|++||+.+|+
T Consensus 273 ~~spdg~~l~~~s~~~g-~~~i~~~d~~~~~---~~~l~~~~-~-~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAG-RPQVYKVNINGGA---PQRITWEG-S-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EECTTSSEEEEEECTTS-SCEEEEEETTSSC---CEECCCSS-S-EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred EECCCCCEEEEEECCCC-CcEEEEEECCCCC---EEEEecCC-C-cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 39999999999987543 4579999998765 34444433 2 3333444 455567777766666799999998777
Q ss_pred eeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 388 RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 388 ~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. +.+.... .+..+.++|+++.+++.... .....+|.+|+
T Consensus 347 ~-~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~ 385 (415)
T 2hqs_A 347 V-QVLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVST 385 (415)
T ss_dssp E-EECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEET
T ss_pred E-EEecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEEC
Confidence 6 5555433 56678889999877765543 33457999999
No 93
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.75 E-value=3.1e-17 Score=161.22 Aligned_cols=191 Identities=20% Similarity=0.180 Sum_probs=133.4
Q ss_pred cCCCCCcEEEEecCCCCCcCCccccHHHHHHHHh--cCeEEEEEecccC------CCCCchhhhc-ccc---ccCCCchh
Q psy4818 483 LRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRGG------GELGEDWHNA-GRL---LKKQNCFD 550 (734)
Q Consensus 483 ~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~------~~~g~~~~~~-~~~---~~~~~~~~ 550 (734)
..+++.|+||++||+.+... .|. .+...|++ +||.|+++|+||. |..+..|.+. +.+ ......++
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~--~~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~ 95 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRT--DFK-PVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLN 95 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGG--GGH-HHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHH
T ss_pred cCCCCCCEEEEEecCCCChH--HHH-HHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHH
Confidence 34567899999999865443 233 34566665 7999999998852 1112223221 111 01112233
Q ss_pred HH----HHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh-cCCCceeEEEEcCCcchhccccccccCcccccccCCCC
Q psy4818 551 DF----QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN-QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPN 625 (734)
Q Consensus 551 D~----~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~ 625 (734)
+. .+.++++.+ ..+++++++++|+|+||++++.++. ++|+.++++|+.+|..+.....
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~---------------- 158 (226)
T 3cn9_A 96 ASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL---------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC----------------
T ss_pred HHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh----------------
Confidence 33 344444433 2468889999999999999999999 9999999999999977543211
Q ss_pred CHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC
Q psy4818 626 NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT 705 (734)
Q Consensus 626 ~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 705 (734)
.+.+ . .++.| +|+++|++|..||+.++.++++.|+.. |.++++++++ +||.+.
T Consensus 159 ---------~~~~----~----~~~~P-~lii~G~~D~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~-~gH~~~- 211 (226)
T 3cn9_A 159 ---------ALDE----R----HKRIP-VLHLHGSQDDVVDPALGRAAHDALQAQ-------GVEVGWHDYP-MGHEVS- 211 (226)
T ss_dssp ---------CCCT----G----GGGCC-EEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEES-CCSSCC-
T ss_pred ---------hhcc----c----ccCCC-EEEEecCCCCccCHHHHHHHHHHHHHc-------CCceeEEEec-CCCCcc-
Confidence 0000 1 15556 999999999999999999999999988 7889999999 999874
Q ss_pred chHHhHHHHHHHHHHHHHHc
Q psy4818 706 PLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 706 ~~~~~~~~~~~~~~fl~~~l 725 (734)
.+....+.+||.++|
T Consensus 212 -----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 212 -----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp -----HHHHHHHHHHHHHHC
T ss_pred -----hhhHHHHHHHHHhhC
Confidence 234556899998875
No 94
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.75 E-value=2.5e-17 Score=168.78 Aligned_cols=210 Identities=12% Similarity=0.056 Sum_probs=136.3
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCcc---c-cHHHHHHHHhc----CeEEEEEecccC
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT---F-SISRCMFLRHF----NGIYAIPNIRGG 529 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~---~-~~~~~~~l~~~----G~~v~~~~~rG~ 529 (734)
..+.+++.+.++ .+.++++.|+++.+++++|+|+++||+.+....+. . ....+..|.++ |++|+++|++|+
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~ 118 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 118 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC
Confidence 677888988886 89999999998866678999999999876543221 1 12234444444 599999999986
Q ss_pred CCCCchhhhccccccCCCchhHHHHHHHHHHHcCC------------CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEE
Q psy4818 530 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY------------TKPKYITIMGGSNGGLLVGACLNQRPELYGAAL 597 (734)
Q Consensus 530 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~------------~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v 597 (734)
.+.+..|... ..+|+ +.++.+... .|+.+++|+|+|+||++++.++.++|++|++++
T Consensus 119 ~~~~~~~~~~--------~~~~l---~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v 187 (297)
T 1gkl_A 119 NCTAQNFYQE--------FRQNV---IPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFM 187 (297)
T ss_dssp TCCTTTHHHH--------HHHTH---HHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEE
T ss_pred ccchHHHHHH--------HHHHH---HHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheee
Confidence 5433332210 12333 344433321 377899999999999999999999999999999
Q ss_pred EcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHH
Q psy4818 598 ILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL 677 (734)
Q Consensus 598 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L 677 (734)
+.+|...+... +. .....+..+...+ .++. ...+ +++.+|+.|.. +.++.+++++|
T Consensus 188 ~~sg~~~~~~~-------------~~-~~~~~~~~~~~~~---~~~~----~~~~-l~~~~G~~D~~--~~~~~~l~~~L 243 (297)
T 1gkl_A 188 PLSGDYWYGNS-------------PQ-DKANSIAEAINRS---GLSK----REYF-VFAATGSEDIA--YANMNPQIEAM 243 (297)
T ss_dssp EESCCCCBSSS-------------HH-HHHHHHHHHHHHH---TCCT----TSCE-EEEEEETTCTT--HHHHHHHHHHH
T ss_pred EeccccccCCc-------------cc-hhhhHHHHHHhhc---cCCc----CcEE-EEEEeCCCccc--chhHHHHHHHH
Confidence 99997643210 00 0001111111111 1221 1222 67778999975 46888999999
Q ss_pred Hhhh-C--CCCCCCCcEEEEEeCCCCCCC
Q psy4818 678 QEKI-G--SLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 678 ~~~~-~--~~~~~~~~~~~~~~~~~gH~~ 703 (734)
+++. . .....+.++++.+++++||.+
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 244 KALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HTSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHcCCccccccccCCceEEEECCCCCcCH
Confidence 9871 0 000011689999999999975
No 95
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.74 E-value=1.2e-17 Score=167.12 Aligned_cols=184 Identities=16% Similarity=0.153 Sum_probs=132.6
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEE--ecccCCCCCchhhhcc-cccc----CCCchhHHHHHHHH
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP--NIRGGGELGEDWHNAG-RLLK----KQNCFDDFQAAAEY 558 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~rG~~~~g~~~~~~~-~~~~----~~~~~~D~~~~~~~ 558 (734)
++.|+||++||+.+... .|. .+...|++ +|.|+++ |+||.|++ .|.... .... .....+|+.+++++
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~-~~~v~~~~~d~~g~g~s--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFF-DFGARLLP-QATILSPVGDVSEHGAA--RFFRRTGEGVYDMVDLERATGKMADFIKA 133 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHH-HHHHHHST-TSEEEEECCSEEETTEE--ESSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHH-HHHHhcCC-CceEEEecCCcCCCCCc--ccccCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 56899999999865433 233 24466665 7999999 78886633 232211 0100 11235677777777
Q ss_pred HHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCc
Q psy4818 559 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 638 (734)
Q Consensus 559 l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 638 (734)
+.++. +.++++|+|+|+||++++.++.++|++++++|+.+|+.+... .+
T Consensus 134 ~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-----------------------------~~ 182 (251)
T 2r8b_A 134 NREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-----------------------------KI 182 (251)
T ss_dssp HHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-----------------------------CC
T ss_pred HHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-----------------------------cc
Confidence 76653 778999999999999999999999999999999999764321 00
Q ss_pred cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHH
Q psy4818 639 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIY 718 (734)
Q Consensus 639 ~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 718 (734)
.... ++.| +|+++|++|..|++.++.+++++|++. +.++++ +++++||.+. .+....+.
T Consensus 183 --~~~~----~~~P-~li~~g~~D~~~~~~~~~~~~~~l~~~-------~~~~~~-~~~~~gH~~~------~~~~~~~~ 241 (251)
T 2r8b_A 183 --SPAK----PTRR-VLITAGERDPICPVQLTKALEESLKAQ-------GGTVET-VWHPGGHEIR------SGEIDAVR 241 (251)
T ss_dssp --CCCC----TTCE-EEEEEETTCTTSCHHHHHHHHHHHHHH-------SSEEEE-EEESSCSSCC------HHHHHHHH
T ss_pred --cccc----cCCc-EEEeccCCCccCCHHHHHHHHHHHHHc-------CCeEEE-EecCCCCccC------HHHHHHHH
Confidence 1111 3455 999999999999999999999999988 777776 5567899983 24456789
Q ss_pred HHHHHHcCC
Q psy4818 719 VFLMKSLGL 727 (734)
Q Consensus 719 ~fl~~~l~~ 727 (734)
+||.++|+.
T Consensus 242 ~~l~~~l~~ 250 (251)
T 2r8b_A 242 GFLAAYGGG 250 (251)
T ss_dssp HHHGGGC--
T ss_pred HHHHHhcCC
Confidence 999998864
No 96
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=1.7e-16 Score=184.66 Aligned_cols=303 Identities=10% Similarity=0.045 Sum_probs=181.7
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC----CceE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG----SDWN 168 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g----~~~~ 168 (734)
...++++|.+++. . . . .|++.+..++..++++.......- .....+++|||||++|||...... +...
T Consensus 21 ~~~w~~dg~~~~~-~--~--~--~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 21 SLRWISDHEYLYK-Q--E--N--NILVFNAEYGNSSVFLENSTFDEF-GHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CEEECSSSEEEEE-E--T--T--EEEEEETTTCCEEEEECTTTTTTC-CSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCCcEEEE-c--C--C--cEEEEECCCCceEEEEechhhhhh-cccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3455577754443 2 2 1 366666667777778775543211 111235899999999999986421 2236
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 248 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~ 248 (734)
.+|++|+++|+..+.+........++|||||+.|+|+.. ..||++++.++.... +.+....+
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~-----------------~~i~~~~~~~~~~~~-lt~~g~~~ 154 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-----------------NDIYVKIEPNLPSYR-ITWTGKED 154 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET-----------------TEEEEESSTTSCCEE-CCSCCBTT
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC-----------------CeEEEEECCCCceEE-EcCCCCcc
Confidence 899999999987654443333468999999999999963 269999987765321 11111111
Q ss_pred Ce---------------eEEEEEEecCCcEEEEEEecCCC--------------------------------CceEEEEe
Q psy4818 249 RS---------------LGLHSEVTDCGRYLLVSTSNNTQ--------------------------------GSDLHYFD 281 (734)
Q Consensus 249 ~~---------------~~~~~~~SpDG~~l~~~~~~~~~--------------------------------~~~i~~~d 281 (734)
.. ....+.|||||++|+|...+... ...|+++|
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d 234 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred ceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEE
Confidence 00 01247899999999998643221 02688899
Q ss_pred CCC---CCCCcccCCCCceeeec------cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC----CCCceEee
Q psy4818 282 LHS---LPDGKISGKFPLKTVIP------GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC----EKNWKTLI 347 (734)
Q Consensus 282 ~~~---~~~~~l~~~~~~~~l~~------~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~~l~ 347 (734)
+++ +... ....+.. .......+ |||||+.+++..++......|+++|+++++ ......++
T Consensus 235 ~~~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 235 TDSLSSVTNA------TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp TTSCCSSSCC------CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred CCCCCCCCcc------eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 887 4210 1122221 11112223 999999888888887767789999998764 11122332
Q ss_pred cCCCCcee------EEEEEeeCCEEE-EEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEec-CC
Q psy4818 348 PEDENRTL------DVVAAVANNKLI-VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS-FL 419 (734)
Q Consensus 348 ~~~~~~~~------~~~~~~~~~~l~-~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss-~~ 419 (734)
.+.....+ ...+.++++.++ +...++|..+|+++|+.+++ .+.|+.....+..+. .+|++.++|..+. ..
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~-~~~lT~g~~~v~~~~-~~d~~~i~f~~~~~~~ 386 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD-CTFITKGTWEVIGIE-ALTSDYLYYISNEYKG 386 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS-CEESCCSSSCEEEEE-EECSSEEEEEESCGGG
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc-eEecccCCEEEEEEE-EEeCCEEEEEEecCCC
Confidence 22211111 123335555666 55567788999999996554 467775544443332 2457777776543 02
Q ss_pred CC--ceEEEEeC
Q psy4818 420 QP--GTIYHCNI 429 (734)
Q Consensus 420 ~P--~~~~~~d~ 429 (734)
.| ..||.+++
T Consensus 387 ~~~~~~ly~v~~ 398 (740)
T 4a5s_A 387 MPGGRNLYKIQL 398 (740)
T ss_dssp CTTCBEEEEEET
T ss_pred CCceeEEEEEEC
Confidence 34 46888888
No 97
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.74 E-value=1.2e-17 Score=163.88 Aligned_cols=199 Identities=16% Similarity=0.140 Sum_probs=138.5
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc-----
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL----- 543 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~----- 543 (734)
+..+...++.|.. ...|+||++||+.+... .|.. +...|++ ||.|+++|.++....|..|+......
T Consensus 15 ~~~l~~~~~~~~~----~~~p~vv~lHG~g~~~~--~~~~-~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~ 86 (223)
T 3b5e_A 15 DLAFPYRLLGAGK----ESRECLFLLHGSGVDET--TLVP-LARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQK 86 (223)
T ss_dssp SSSSCEEEESTTS----SCCCEEEEECCTTBCTT--TTHH-HHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred CCCceEEEeCCCC----CCCCEEEEEecCCCCHH--HHHH-HHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHH
Confidence 4445554443332 33499999999765443 3333 4466665 99999999887432255555421100
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCC
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 623 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 623 (734)
......+|+.+.++++.++..+++++++|+|+|+||.+++.++.++|+.++++|+.+|......
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------- 150 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH---------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------------
Confidence 0112345666677777665457889999999999999999999999999999999998653210
Q ss_pred CCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC
Q psy4818 624 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 624 ~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~ 703 (734)
+ + .... .+.| +|+++|++|..||+.++. +++.|++. |.++++++++ +||.+
T Consensus 151 ~-------------~--~~~~----~~~P-~li~~G~~D~~v~~~~~~-~~~~l~~~-------g~~~~~~~~~-~gH~~ 201 (223)
T 3b5e_A 151 V-------------P--ATDL----AGIR-TLIIAGAADETYGPFVPA-LVTLLSRH-------GAEVDARIIP-SGHDI 201 (223)
T ss_dssp C-------------C--CCCC----TTCE-EEEEEETTCTTTGGGHHH-HHHHHHHT-------TCEEEEEEES-CCSCC
T ss_pred c-------------c--cccc----cCCC-EEEEeCCCCCcCCHHHHH-HHHHHHHC-------CCceEEEEec-CCCCc
Confidence 0 0 1111 3445 999999999999999999 99999988 8899999999 99998
Q ss_pred CCchHHhHHHHHHHHHHHHHHcC
Q psy4818 704 GTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 704 ~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
.. +....+.+||.+.+.
T Consensus 202 ~~------~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 202 GD------PDAAIVRQWLAGPIA 218 (223)
T ss_dssp CH------HHHHHHHHHHHCC--
T ss_pred CH------HHHHHHHHHHHhhhh
Confidence 52 334567899987654
No 98
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.74 E-value=9.3e-18 Score=169.67 Aligned_cols=214 Identities=14% Similarity=0.121 Sum_probs=139.0
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
++.|+||++||..+.... |. .+...|+++||.|+++|+||.|......... .-....+|+.++++++.++
T Consensus 38 g~~~~vv~~HG~~~~~~~--~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~~~~~~d~~~~i~~l~~~--- 107 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPHS--MR-PLAEAYAKAGYTVCLPRLKGHGTHYEDMERT----TFHDWVASVEEGYGWLKQR--- 107 (270)
T ss_dssp CSSEEEEEECCTTCCGGG--TH-HHHHHHHHTTCEEEECCCTTCSSCHHHHHTC----CHHHHHHHHHHHHHHHHTT---
T ss_pred CCCeEEEEECCCCCChhH--HH-HHHHHHHHCCCEEEEeCCCCCCCCccccccC----CHHHHHHHHHHHHHHHHhh---
Confidence 345999999997655432 43 3456677779999999999966543221111 1112356778888888755
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc----cCcccccccCCCC-------------CHH
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IAYYSESEFGSPN-------------NKT 628 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~~~~~~~~~g~~~-------------~~~ 628 (734)
.++++++|+|+||++++.++.++|+ ++++|+.+|..++....... ....|...++... ...
T Consensus 108 -~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
T 3rm3_A 108 -CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTA 185 (270)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHH
T ss_pred -CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChh
Confidence 6789999999999999999999999 99999999876543221100 0011111111100 001
Q ss_pred HHHHHHhC--CccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc
Q psy4818 629 HFHNLLSY--SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP 706 (734)
Q Consensus 629 ~~~~~~~~--sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 706 (734)
.+..+... .....+.. ++.| +|+++|++|..|++.++.++++++. +.++++++++++||.+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~ 251 (270)
T 3rm3_A 186 SLLQLARLMAQTKAKLDR----IVCP-ALIFVSDEDHVVPPGNADIIFQGIS---------STEKEIVRLRNSYHVATLD 251 (270)
T ss_dssp HHHHHHHHHHHHHHTGGG----CCSC-EEEEEETTCSSSCTTHHHHHHHHSC---------CSSEEEEEESSCCSCGGGS
T ss_pred HHHHHHHHHHHHHhhhhh----cCCC-EEEEECCCCcccCHHHHHHHHHhcC---------CCcceEEEeCCCCcccccC
Confidence 11111000 01122332 5666 9999999999999999988887764 3367899999999998654
Q ss_pred hHHhHHHHHHHHHHHHHHcC
Q psy4818 707 LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 707 ~~~~~~~~~~~~~fl~~~l~ 726 (734)
.. ..+....+.+||.++.+
T Consensus 252 ~~-~~~~~~~i~~fl~~~~~ 270 (270)
T 3rm3_A 252 YD-QPMIIERSLEFFAKHAG 270 (270)
T ss_dssp TT-HHHHHHHHHHHHHHHC-
T ss_pred cc-HHHHHHHHHHHHHhcCC
Confidence 33 24667788999998753
No 99
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.74 E-value=2.4e-17 Score=164.09 Aligned_cols=216 Identities=15% Similarity=0.146 Sum_probs=140.7
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCC-CchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL-GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
.+..|+||++||..+... .|. .+...|+++||.|+++|+||.|.. +....... ......+|+.++++++..+
T Consensus 19 ~~~~~~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~---~~~~~~~d~~~~i~~l~~~- 91 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPN--DMN-FMARALQRSGYGVYVPLFSGHGTVEPLDILTKG---NPDIWWAESSAAVAHMTAK- 91 (251)
T ss_dssp CCSSEEEEEECCTTCCGG--GGH-HHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHC---CHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCceEEEeCCCCCCHH--HHH-HHHHHHHHCCCEEEecCCCCCCCCChhhhcCcc---cHHHHHHHHHHHHHHHHHh-
Confidence 346788999999766554 343 355667778999999999997655 22221110 1111256788888888765
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccccc---CcccccccCCCCCHHHH--------HH
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI---AYYSESEFGSPNNKTHF--------HN 632 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~---~~~~~~~~g~~~~~~~~--------~~ 632 (734)
.++++++|||+||++++.++.++|++++++|+.+|+........... ...+....+.......+ ..
T Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (251)
T 3dkr_A 92 ---YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAA 168 (251)
T ss_dssp ---CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHH
Confidence 67999999999999999999999999999999999876432110000 00000001111111111 11
Q ss_pred HHhC--CccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHh
Q psy4818 633 LLSY--SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKS 710 (734)
Q Consensus 633 ~~~~--sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 710 (734)
+... .+...+.. ++.| +|+++|++|..|++.++.++++++... .++++++++++||.+..... .
T Consensus 169 ~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~gH~~~~~~~-~ 234 (251)
T 3dkr_A 169 IDQFATTVAADLNL----VKQP-TFIGQAGQDELVDGRLAYQLRDALINA--------ARVDFHWYDDAKHVITVNSA-H 234 (251)
T ss_dssp HHHHHHHHHHTGGG----CCSC-EEEEEETTCSSBCTTHHHHHHHHCTTC--------SCEEEEEETTCCSCTTTSTT-H
T ss_pred HHHHHHHHhccccc----cCCC-EEEEecCCCcccChHHHHHHHHHhcCC--------CCceEEEeCCCCcccccccc-h
Confidence 1110 01223333 5666 999999999999999999888877540 36789999999999865532 2
Q ss_pred HHHHHHHHHHHHHH
Q psy4818 711 IEEMTDIYVFLMKS 724 (734)
Q Consensus 711 ~~~~~~~~~fl~~~ 724 (734)
.+....+.+||.+.
T Consensus 235 ~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 235 HALEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhh
Confidence 46777889999864
No 100
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.74 E-value=7.7e-17 Score=166.41 Aligned_cols=239 Identities=13% Similarity=0.072 Sum_probs=152.1
Q ss_pred CceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCch
Q psy4818 456 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 456 ~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
.+..+.+.+++ +|..+.+..+.+.. .++..|+||++||..+... .|.. +...|+++||.|+++|+||.|....
T Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~- 89 (315)
T 4f0j_A 17 AYPVHYLDFTS-QGQPLSMAYLDVAP--KKANGRTILLMHGKNFCAG--TWER-TIDVLADAGYRVIAVDQVGFCKSSK- 89 (315)
T ss_dssp SSCCEEEEEEE-TTEEEEEEEEEECC--SSCCSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCC-
T ss_pred CccceeEEEec-CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCcch--HHHH-HHHHHHHCCCeEEEeecCCCCCCCC-
Confidence 34567777765 66677766665543 2466799999999866544 2443 4566777799999999999654321
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc---ccc
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN---KFT 612 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~---~~~ 612 (734)
.......++++.+.+..+++. .+.++++++|+|+||++++.++.++|+.++++|+..|........ ...
T Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 161 (315)
T 4f0j_A 90 ------PAHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWR 161 (315)
T ss_dssp ------CSSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCC
T ss_pred ------CCccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhh
Confidence 111245678888888887776 455689999999999999999999999999999998853211000 000
Q ss_pred cCcccc----------------ccc-CCCCC---HH-----------------------HHHHHHhCCccCCCCCCCCCc
Q psy4818 613 IAYYSE----------------SEF-GSPNN---KT-----------------------HFHNLLSYSPLHNIKVPPNNT 649 (734)
Q Consensus 613 ~~~~~~----------------~~~-g~~~~---~~-----------------------~~~~~~~~sp~~~~~~p~~~~ 649 (734)
....|. ..+ ..... .. ....+...+....+.. +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~ 237 (315)
T 4f0j_A 162 SVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDR----L 237 (315)
T ss_dssp CHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGG----C
T ss_pred hhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhccc----C
Confidence 000000 000 00000 00 0111122223333443 6
Q ss_pred cCCcEEEEecCCCCCCCChHH------------HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHH
Q psy4818 650 QYPATLVLTGDHDDRVPPLHS------------YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDI 717 (734)
Q Consensus 650 ~~P~~Li~~g~~D~~v~~~~~------------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 717 (734)
++| +|+++|++|..||..+. .+..+.+.+. ...+++++++++||....... .+....+
T Consensus 238 ~~P-~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~gH~~~~~~p--~~~~~~i 307 (315)
T 4f0j_A 238 QMP-TLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARR-------IPQATLVEFPDLGHTPQIQAP--ERFHQAL 307 (315)
T ss_dssp CSC-EEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHH-------STTEEEEEETTCCSCHHHHSH--HHHHHHH
T ss_pred CCC-eEEEEecCCCcCccccccccccccccccchhhhhHHHhh-------cCCceEEEeCCCCcchhhhCH--HHHHHHH
Confidence 777 99999999999996655 5667777776 556789999999998643222 3455566
Q ss_pred HHHHHH
Q psy4818 718 YVFLMK 723 (734)
Q Consensus 718 ~~fl~~ 723 (734)
.+||.+
T Consensus 308 ~~fl~~ 313 (315)
T 4f0j_A 308 LEGLQT 313 (315)
T ss_dssp HHHHCC
T ss_pred HHHhcc
Confidence 777653
No 101
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.73 E-value=1.7e-16 Score=161.02 Aligned_cols=228 Identities=10% Similarity=0.025 Sum_probs=139.5
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 544 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~ 544 (734)
..+|. ++.+|.|++ ++.|+|||+|||...... ..+...+..++++.||.|+.+|||+.++. .|
T Consensus 11 ~~~~~--~~~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~-------- 74 (274)
T 2qru_A 11 LANGA--TVTIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--KI-------- 74 (274)
T ss_dssp CTTSC--EEEEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--CH--------
T ss_pred ccCCe--eEEEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--CC--------
Confidence 34564 556777753 467999999998643322 23434455677778999999999986653 11
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh---cCCCceeEEEEcCCcchhcccccc---cc---Cc
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN---QRPELYGAALILVGALDMLRFNKF---TI---AY 615 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~---~~p~~~~a~v~~~~~~d~~~~~~~---~~---~~ 615 (734)
...++|+.++++||.++.. +++||+|+|+|+||.+++.++. ..|...+++|+.+|+.|....... .. ..
T Consensus 75 -p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T 2qru_A 75 -DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISA 152 (274)
T ss_dssp -HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCS
T ss_pred -cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccH
Confidence 2247899999999987642 3789999999999999999986 346678889988888772110000 00 00
Q ss_pred cccccc-C------CCCCHHH-----------HHHHHhCCcc-----CCCCCCCCCccCCcEEEEecCCCCCCCChHHHH
Q psy4818 616 YSESEF-G------SPNNKTH-----------FHNLLSYSPL-----HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYK 672 (734)
Q Consensus 616 ~~~~~~-g------~~~~~~~-----------~~~~~~~sp~-----~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~ 672 (734)
.+...+ . ....... +..+...... ..+... .-...||+||++|+.|+.++..++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lpP~li~~G~~D~~~~~~~~~~ 231 (274)
T 2qru_A 153 KEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDE-TLKTFPPCFSTASSSDEEVPFRYSKK 231 (274)
T ss_dssp GGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHH-HHHTSCCEEEEEETTCSSSCTHHHHH
T ss_pred HHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChh-hhcCCCCEEEEEecCCCCcCHHHHHH
Confidence 000000 0 0000000 0001000000 001000 00234779999999999998887766
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc--hHHhHHHHHHHHHHHHH
Q psy4818 673 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP--LMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 673 ~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 723 (734)
+.+++ +.++++++++++|++... .....+....+.+||.+
T Consensus 232 l~~~~-----------~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 232 IGRTI-----------PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHS-----------TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHhC-----------CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 66544 345899999999998532 12223556678888864
No 102
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.73 E-value=4.2e-17 Score=173.40 Aligned_cols=148 Identities=14% Similarity=0.052 Sum_probs=101.3
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEecccc--CCCCCcEEEEecCCCCCcCCcccc---HHHHHHHHhcCeEEEEEecccC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGAL--RNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRGG 529 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~--~~~~~P~vv~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG~ 529 (734)
..+..+...+++.||..+.++.+.|.... +.++.|+||++||..+....+... ..++..|+++||.|+++|+||.
T Consensus 23 ~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 35567888899999999988887664311 114689999999987665433211 1234467777999999999996
Q ss_pred CCCCchhhh-ccccccCCCc----hh-HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEcC
Q psy4818 530 GELGEDWHN-AGRLLKKQNC----FD-DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILV 600 (734)
Q Consensus 530 ~~~g~~~~~-~~~~~~~~~~----~~-D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~ 600 (734)
|.....-.. .......... .+ |+.++++++.++ .+.++++++|||+||.+++.++.++|+ .++++|+.+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 644321000 0000000122 23 777788887765 345689999999999999999999998 789999998
Q ss_pred Ccch
Q psy4818 601 GALD 604 (734)
Q Consensus 601 ~~~d 604 (734)
|...
T Consensus 181 ~~~~ 184 (377)
T 1k8q_A 181 PVAT 184 (377)
T ss_dssp CCSC
T ss_pred Cchh
Confidence 8654
No 103
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.73 E-value=1.5e-17 Score=186.23 Aligned_cols=244 Identities=13% Similarity=0.022 Sum_probs=161.5
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC-CccccHHHH-HHHHhcCeEEEEEecccCCCCCch
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISRC-MFLRHFNGIYAIPNIRGGGELGED 535 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~-~~l~~~G~~v~~~~~rG~~~~g~~ 535 (734)
..+.+.+++.||.+|.+.++.|++ .++.|+||+.||...... ...|.. .. .+|+++||+|+.+|+||.|+.+..
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~-~~~~~la~~Gy~vv~~D~RG~G~S~g~ 83 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQS-TNWLEFVRDGYAVVIQDTRGLFASEGE 83 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTT-CCTHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEEEEECCCCCEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchh-hHHHHHHHCCCEEEEEcCCCCCCCCCc
Confidence 346789999999999999999976 357899999876322211 001211 12 556678999999999998877654
Q ss_pred hhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc-chhccccccccC
Q psy4818 536 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA-LDMLRFNKFTIA 614 (734)
Q Consensus 536 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~-~d~~~~~~~~~~ 614 (734)
+.. .....+|+.++++||.++.+.+ .+|+++|+||||+++++++.++|+.++|+|+.++. .|+........+
T Consensus 84 ~~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG 156 (587)
T 3i2k_A 84 FVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGG 156 (587)
T ss_dssp CCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTC
T ss_pred ccc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCC
Confidence 432 1346899999999999887766 79999999999999999999989999999999998 876542111111
Q ss_pred c-------ccccc---------c-CCCCCHHH-------------------------------------------HHHHH
Q psy4818 615 Y-------YSESE---------F-GSPNNKTH-------------------------------------------FHNLL 634 (734)
Q Consensus 615 ~-------~~~~~---------~-g~~~~~~~-------------------------------------------~~~~~ 634 (734)
. .|... + ..|...+. -.+++
T Consensus 157 ~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~yw~ 236 (587)
T 3i2k_A 157 ALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDESWQ 236 (587)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCCHHHH
T ss_pred ccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCChHHh
Confidence 0 12110 0 00110000 01233
Q ss_pred hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc--------
Q psy4818 635 SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP-------- 706 (734)
Q Consensus 635 ~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-------- 706 (734)
..++...+.+ ++.| +|+++|..|..+ ..+.+++++|+.. ++ ..+++-|. .|+....
T Consensus 237 ~~s~~~~l~~----I~vP-vL~v~Gw~D~~~--~~~~~~~~~l~~~-------~~-~~L~iGPw-~H~~~~~~~g~~~~g 300 (587)
T 3i2k_A 237 SISLFERLGG----LATP-ALITAGWYDGFV--GESLRTFVAVKDN-------AD-ARLVVGPW-SHSNLTGRNADRKFG 300 (587)
T ss_dssp TTCCHHHHTT----CCCC-EEEEEEEECTTH--HHHHHHHHHHTTT-------SC-EEEEEEEE-ETTBCSSEETTEECC
T ss_pred cCChhhhhcc----CCCC-EEEEccCCCccc--hHHHHHHHHHhhc-------CC-CEEEECCc-cccCccccCCCcccC
Confidence 3344334443 7888 999999999764 4578899998766 43 35666554 3642110
Q ss_pred hHHhH---HHHHHHHHHHHHHcCCC
Q psy4818 707 LMKSI---EEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 707 ~~~~~---~~~~~~~~fl~~~l~~~ 728 (734)
....+ +....+++||+++|+..
T Consensus 301 ~~~~~~~~~~~~~~~~wFD~~Lkg~ 325 (587)
T 3i2k_A 301 IAATYPIQEATTMHKAFFDRHLRGE 325 (587)
T ss_dssp GGGSCCHHHHHHHHHHHHHHHHSCC
T ss_pred CccccccchhhHHHHHHHHHHhcCC
Confidence 01111 33367899999999754
No 104
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=2.4e-16 Score=168.75 Aligned_cols=247 Identities=9% Similarity=0.002 Sum_probs=153.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccccc-CeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~-~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..++|||||++|||+.+.+|. ..||++|+++|+....+...... ..+.|||||+.|+|+..+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~------------- 102 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL------------- 102 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-------------
T ss_pred eecCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-------------
Confidence 4568999999999999987654 57999999999865444333222 3489999999999998522
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEE-------------------EEEecCCcEEEEEEe-cCCCCceEEEEeC
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH-------------------SEVTDCGRYLLVSTS-NNTQGSDLHYFDL 282 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~-------------------~~~SpDG~~l~~~~~-~~~~~~~i~~~d~ 282 (734)
+||++++.++. ...++..+.. +... +.|||||+++++... .......||++|+
T Consensus 103 ---~l~~~d~~~~~--~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~ 175 (396)
T 3c5m_A 103 ---NLMKVDLETLE--EQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI 175 (396)
T ss_dssp ---EEEEEETTTCC--EEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET
T ss_pred ---cEEEEECCCCC--cEEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC
Confidence 69999988764 2344443221 2111 345666666554321 1123368999999
Q ss_pred CCCCCCcccCCCCceeeeccccceEE-EEEe-cCCeEEEEeCCCCC--CceEEEEecCCCCCCCceEeecCCCCceeEEE
Q psy4818 283 HSLPDGKISGKFPLKTVIPGMDHHHE-IIAN-NGPELIVKTTKNAP--KGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 358 (734)
Q Consensus 283 ~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~--~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~ 358 (734)
.++. ...+......... .|+| ||++|+|.++.... ..+|+.++++++. ++.++.......+...
T Consensus 176 ~~g~---------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 176 ETGE---------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHE 243 (396)
T ss_dssp TTCC---------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEE
T ss_pred CCCc---------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccce
Confidence 8732 2333322222223 4999 88889998863211 2579999997654 4555553223334444
Q ss_pred EEe-eCCEEEEEEEeCCcee--EEEEECCCCceeeeeCCCCceEEeeccCc-ccceEEEEEecCCCC-------------
Q psy4818 359 AAV-ANNKLIVHYIQNVRSV--MDLHDLNTGKRLHSFPLDLGQITHISGRR-KYNEVFYGFTSFLQP------------- 421 (734)
Q Consensus 359 ~~~-~~~~l~~~~~~~~~~~--l~~~dl~~g~~~~~l~~~~g~v~~~~~~~-d~~~l~~~~ss~~~P------------- 421 (734)
.+. +++.|++....++... |++||+.+|+.......+ + .. +.+++ |++.+++..+ . .|
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~dg~~l~~~~~-~-~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFDGSLMVGDGC-D-APVDVADADSYNIEN 318 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSSSSEEEEEEC-C-C----------CCCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCCCceEEEecC-C-cceeeccccccccCC
Confidence 444 4456777777666655 999999877753322223 2 22 56677 8875554332 2 33
Q ss_pred -ceEEEEeC
Q psy4818 422 -GTIYHCNI 429 (734)
Q Consensus 422 -~~~~~~d~ 429 (734)
..+|++|+
T Consensus 319 ~~~i~~~d~ 327 (396)
T 3c5m_A 319 DPFLYVLNT 327 (396)
T ss_dssp CCEEEEEET
T ss_pred CCcEEEEec
Confidence 68999999
No 105
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.72 E-value=1.1e-16 Score=164.88 Aligned_cols=237 Identities=13% Similarity=0.097 Sum_probs=139.7
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccC-CCCCchhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWH 537 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~~~~ 537 (734)
.+...+++.||.+|.++.+.|++. ..++.|+||++||..+... .|.. .+..|+++||.|+++|+||+ |......
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~~--~~~~-~~~~L~~~G~~Vi~~D~rGh~G~S~~~~- 81 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRMD--HFAG-LAEYLSTNGFHVFRYDSLHHVGLSSGSI- 81 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGGG--GGHH-HHHHHHTTTCCEEEECCCBCC--------
T ss_pred ceEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccCch--HHHH-HHHHHHHCCCEEEEeeCCCCCCCCCCcc-
Confidence 345567778999999888877531 1235689999999755433 3443 45677777999999999996 5332110
Q ss_pred hccccccC-CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc----cc
Q psy4818 538 NAGRLLKK-QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----FT 612 (734)
Q Consensus 538 ~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----~~ 612 (734)
.... ....+|+.+++++|.+. +.++++++|+||||++++.++.+ | .++++|+.+|+.++..... ..
T Consensus 82 ----~~~~~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~ 152 (305)
T 1tht_A 82 ----DEFTMTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFD 152 (305)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSC
T ss_pred ----cceehHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhh
Confidence 0000 11246777788888643 34689999999999999999887 7 7788888887654321100 00
Q ss_pred ---cCccccc---cc-CCCCCHH-HHHHHHhCC------ccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHH
Q psy4818 613 ---IAYYSES---EF-GSPNNKT-HFHNLLSYS------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQ 678 (734)
Q Consensus 613 ---~~~~~~~---~~-g~~~~~~-~~~~~~~~s------p~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~ 678 (734)
....... .+ +...... ......... ....+.. +++| +||++|++|..||+.++.++++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vLii~G~~D~~vp~~~~~~l~~~i~ 227 (305)
T 1tht_A 153 YLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN----TSVP-LIAFTANNDDWVKQEEVYDMLAHIR 227 (305)
T ss_dssp GGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTT----CCSC-EEEEEETTCTTSCHHHHHHHHTTCT
T ss_pred hhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhh----cCCC-EEEEEeCCCCccCHHHHHHHHHhcC
Confidence 0000000 00 0000011 111111110 1112232 6677 9999999999999988877766542
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 679 EKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
...+++++++++||..........+.+..+..|...
T Consensus 228 ---------~~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~ 263 (305)
T 1tht_A 228 ---------TGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIA 263 (305)
T ss_dssp ---------TCCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHH
Confidence 234789999999999853322222334444445443
No 106
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.72 E-value=1.3e-16 Score=156.79 Aligned_cols=184 Identities=11% Similarity=0.090 Sum_probs=133.7
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEE--ecccCCCCCchhhhcc-ccccC----CCchhHHHHHHHH
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP--NIRGGGELGEDWHNAG-RLLKK----QNCFDDFQAAAEY 558 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~rG~~~~g~~~~~~~-~~~~~----~~~~~D~~~~~~~ 558 (734)
++.|+||++||+.+... .|. .+...|++ ||.|+++ |.||.|.. .|.... ..... ...++++.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~~~--~~~-~~~~~l~~-g~~v~~~~~d~~g~g~s--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL--DLL-PLAEIVDS-EASVLSVRGNVLENGMP--RFFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCCTT--TTH-HHHHHHHT-TSCEEEECCSEEETTEE--ESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--HHH-HHHHHhcc-CceEEEecCcccCCcch--hhccccCccCcChhhHHHHHHHHHHHHHH
Confidence 57899999999865543 233 34567776 9999999 88885532 121110 00001 1224455666666
Q ss_pred HHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCc
Q psy4818 559 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 638 (734)
Q Consensus 559 l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 638 (734)
+.++..+++++++++|+|+||++++.++.++|+.++++|+.+|..+...
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6676667889999999999999999999999999999999998764311
Q ss_pred cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHH
Q psy4818 639 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIY 718 (734)
Q Consensus 639 ~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 718 (734)
...... .+.| +|+++|++|..+++.++.++++.+++. +.++++ +++++||.+. .+....+.
T Consensus 159 -~~~~~~---~~~p-~l~~~G~~D~~~~~~~~~~~~~~l~~~-------~~~~~~-~~~~~gH~~~------~~~~~~~~ 219 (226)
T 2h1i_A 159 -MQLANL---AGKS-VFIAAGTNDPICSSAESEELKVLLENA-------NANVTM-HWENRGHQLT------MGEVEKAK 219 (226)
T ss_dssp -CCCCCC---TTCE-EEEEEESSCSSSCHHHHHHHHHHHHTT-------TCEEEE-EEESSTTSCC------HHHHHHHH
T ss_pred -cccccc---cCCc-EEEEeCCCCCcCCHHHHHHHHHHHHhc-------CCeEEE-EeCCCCCCCC------HHHHHHHH
Confidence 001110 2444 999999999999999999999999987 778888 9999999884 24456788
Q ss_pred HHHHHHc
Q psy4818 719 VFLMKSL 725 (734)
Q Consensus 719 ~fl~~~l 725 (734)
+||.++|
T Consensus 220 ~~l~~~l 226 (226)
T 2h1i_A 220 EWYDKAF 226 (226)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998765
No 107
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.72 E-value=8.6e-18 Score=179.57 Aligned_cols=149 Identities=10% Similarity=-0.095 Sum_probs=110.8
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC------------cccc---HHHHHHHHhcCe
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL------------PTFS---ISRCMFLRHFNG 519 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~------------~~~~---~~~~~~l~~~G~ 519 (734)
..+..+.+.+++.+|..|+++++.|++. .++.|+||++||..+.... ..|. ..++..|+++||
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~ 160 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGY 160 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTC
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCC
Confidence 4678899999999999999999999864 4679999999997543210 0111 134577888899
Q ss_pred EEEEEecccCCCCCchhhh--------ccc----cccCC----CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHH
Q psy4818 520 IYAIPNIRGGGELGEDWHN--------AGR----LLKKQ----NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 583 (734)
Q Consensus 520 ~v~~~~~rG~~~~g~~~~~--------~~~----~~~~~----~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~ 583 (734)
+|+++|+||.|+.+..-.. ... ...+. ....|+.+++++|.++..+|++||+|+|+|+||++++
T Consensus 161 ~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al 240 (391)
T 3g8y_A 161 VAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMM 240 (391)
T ss_dssp EEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHH
Confidence 9999999997766532100 000 00011 1237899999999999899999999999999999999
Q ss_pred HHHhcCCCceeEEEEcCCcchhc
Q psy4818 584 ACLNQRPELYGAALILVGALDML 606 (734)
Q Consensus 584 ~~~~~~p~~~~a~v~~~~~~d~~ 606 (734)
.++.+. +.++++|+.+++..+.
T Consensus 241 ~~a~~~-~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 241 VLGVLD-KDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHHC-TTCCEEEEESCBCCHH
T ss_pred HHHHcC-CceeEEEEccCCCCcc
Confidence 998875 4678898888877664
No 108
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.72 E-value=9.1e-18 Score=179.74 Aligned_cols=149 Identities=11% Similarity=-0.057 Sum_probs=111.0
Q ss_pred CCCceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC------------Ccccc---HHHHHHHHhcC
Q psy4818 454 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV------------LPTFS---ISRCMFLRHFN 518 (734)
Q Consensus 454 ~~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~------------~~~~~---~~~~~~l~~~G 518 (734)
...+..+.+.+++.+|.+|+++++.|++. .++.|+||++||+.+... ...|. ..++..|+++|
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~G 164 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEG 164 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTT
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCC
Confidence 35678899999999999999999999864 468999999999755322 11121 13567788899
Q ss_pred eEEEEEecccCCCCCchhhhcc----------------ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHH
Q psy4818 519 GIYAIPNIRGGGELGEDWHNAG----------------RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 582 (734)
Q Consensus 519 ~~v~~~~~rG~~~~g~~~~~~~----------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 582 (734)
|+|+++|+||.|+.+....... ..........|+.+++++|.++..+|++||+|+|+|+||+++
T Consensus 165 y~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 165 YIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp CEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 9999999999776653321000 000111234799999999999888999999999999999999
Q ss_pred HHHHhcCCCceeEEEEcCCcchh
Q psy4818 583 GACLNQRPELYGAALILVGALDM 605 (734)
Q Consensus 583 ~~~~~~~p~~~~a~v~~~~~~d~ 605 (734)
+.++...| .++++|+.+++..+
T Consensus 245 ~~~aa~~~-~i~a~v~~~~~~~~ 266 (398)
T 3nuz_A 245 MVLGTLDT-SIYAFVYNDFLCQT 266 (398)
T ss_dssp HHHHHHCT-TCCEEEEESCBCCH
T ss_pred HHHHhcCC-cEEEEEEecccccc
Confidence 99988755 66888886665543
No 109
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=3.4e-17 Score=157.95 Aligned_cols=191 Identities=14% Similarity=0.037 Sum_probs=119.0
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhc--CeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
.|+|||+||..++..... ...+.+++.++ ||.|++||++|+| . +..+.++.++.+ .
T Consensus 2 mptIl~lHGf~ss~~s~k-~~~l~~~~~~~~~~~~v~~pdl~~~g---~----------------~~~~~l~~~~~~--~ 59 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAK-ATTFKSWLQQHHPHIEMQIPQLPPYP---A----------------EAAEMLESIVMD--K 59 (202)
T ss_dssp -CEEEEECCTTCCTTCHH-HHHHHHHHHHHCTTSEEECCCCCSSH---H----------------HHHHHHHHHHHH--H
T ss_pred CcEEEEeCCCCCCCCccH-HHHHHHHHHHcCCCcEEEEeCCCCCH---H----------------HHHHHHHHHHHh--c
Confidence 389999999543332211 12234566554 4999999999843 2 233334444433 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCC--CCHHHHHHHHhCCccCCCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP--NNKTHFHNLLSYSPLHNIK 643 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~~~ 643 (734)
.+++++|+|+|+||++++.++.++|+...+++..++..+........... ...+.+ .......... +....+.
T Consensus 60 ~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~ 134 (202)
T 4fle_A 60 AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQN---PYTGQKYVLESRHIYDLK--AMQIEKL 134 (202)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEEC---TTTCCEEEECHHHHHHHH--TTCCSSC
T ss_pred CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhcc---ccccccccchHHHHHHHH--hhhhhhh
Confidence 45789999999999999999999999877777776665544322111000 001111 1122222222 2233333
Q ss_pred CCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 644 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 644 ~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
. ++.| +||+||++|.+||++++.++++ . +++.+++++||.+.... +....+.+||.-
T Consensus 135 ~----~~~P-~LiihG~~D~~Vp~~~s~~l~~---~-----------~~l~i~~g~~H~~~~~~----~~~~~I~~FL~~ 191 (202)
T 4fle_A 135 E----SPDL-LWLLQQTGDEVLDYRQAVAYYT---P-----------CRQTVESGGNHAFVGFD----HYFSPIVTFLGL 191 (202)
T ss_dssp S----CGGG-EEEEEETTCSSSCHHHHHHHTT---T-----------SEEEEESSCCTTCTTGG----GGHHHHHHHHTC
T ss_pred c----cCce-EEEEEeCCCCCCCHHHHHHHhh---C-----------CEEEEECCCCcCCCCHH----HHHHHHHHHHhh
Confidence 3 6677 9999999999999999877652 1 36888999999986432 345668899875
Q ss_pred HcCCC
Q psy4818 724 SLGLK 728 (734)
Q Consensus 724 ~l~~~ 728 (734)
..++.
T Consensus 192 a~~l~ 196 (202)
T 4fle_A 192 ATALE 196 (202)
T ss_dssp CCCTT
T ss_pred hhhcc
Confidence 54543
No 110
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=6.6e-16 Score=179.04 Aligned_cols=290 Identities=14% Similarity=0.099 Sum_probs=180.0
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCe--EEEeCCCCcC----CC-Cc-----EEEeeEEeCCCCcEEEEEEe
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGST--EVFLDPNKLS----KD-GT-----TALKLYAFSDNGKHFAYCLS 161 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~--~~l~d~~~~~----~~-~~-----~~~~~~~~SPDG~~la~~~~ 161 (734)
..+...|+.++|...++ | +.+..++.. +++++.+.+. .. +. ..+..++|||| ++|+|+.+
T Consensus 29 ~~~~w~g~~~~~~~~~~------i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~ 100 (706)
T 2z3z_A 29 VGLQWMGDNYVFIEGDD------L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ 100 (706)
T ss_dssp TTCEEETTEEEEEETTE------E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET
T ss_pred CCCcCcCCeEEEEeCCc------E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC
Confidence 33444477777655322 4 566667777 7888876441 11 11 34778999999 88999864
Q ss_pred CCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC-----CC
Q psy4818 162 KSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-----EQ 236 (734)
Q Consensus 162 ~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t-----~~ 236 (734)
..|++||+.+|+.............++|||||+.|+|+.. ..|+++++.+ +.
T Consensus 101 ------~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~-----------------~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 101 ------GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN-----------------HNLYIARGGKLGEGMSR 157 (706)
T ss_dssp ------TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET-----------------TEEEEEECBCTTSCCCC
T ss_pred ------CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC-----------------CeEEEEecCcccccCCC
Confidence 3799999999986544433334578999999999999642 2799999987 54
Q ss_pred CCCeeEEecCCCCe------------eEEEEEEecCCcEEEEEEecCC-----------------------------CCc
Q psy4818 237 DKDIPVVEFPNGRS------------LGLHSEVTDCGRYLLVSTSNNT-----------------------------QGS 275 (734)
Q Consensus 237 ~~~~~v~~~~~~~~------------~~~~~~~SpDG~~l~~~~~~~~-----------------------------~~~ 275 (734)
.. .+........ ....+.|||||++|++...+.. ...
T Consensus 158 ~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 158 AI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred cE--EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 32 1111111110 1246899999999998863211 226
Q ss_pred eEEEEeCCCCCCCcccCCCCceeeecc--ccc-eEE-EEEecCCeEEEEeC-CCCCCceEEEEecCCCCCCCceEeecCC
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTVIPG--MDH-HHE-IIANNGPELIVKTT-KNAPKGKVVTINLNNPCEKNWKTLIPED 350 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l~~~--~~~-~~~-~~s~dg~~l~~~s~-~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 350 (734)
.|+++|++++. ...+... ... ... .|+|||+.|++.+. +......|+++|++++. .++.+..+.
T Consensus 236 ~l~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~ 304 (706)
T 2z3z_A 236 TVGIYHLATGK---------TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVET 304 (706)
T ss_dssp EEEEEETTTTE---------EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEE
T ss_pred EEEEEECCCCc---------eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEcc
Confidence 89999998832 1122211 111 122 39999999988653 33445689999998772 134444322
Q ss_pred CCc---eeEEEEEee--CCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEe-eccCcccceEEEEEecCCCC--c
Q psy4818 351 ENR---TLDVVAAVA--NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITH-ISGRRKYNEVFYGFTSFLQP--G 422 (734)
Q Consensus 351 ~~~---~~~~~~~~~--~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~-~~~~~d~~~l~~~~ss~~~P--~ 422 (734)
... .+..+.+.. ++.+++....++..+|+.+++ +|+.++.++.....+.. +.++++++.+++..+. ..| .
T Consensus 305 ~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~-~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~-~~~~~~ 382 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT-TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE-ASPLER 382 (706)
T ss_dssp CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET-TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS-SCTTCB
T ss_pred CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC-CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC-CCCceE
Confidence 111 112333443 467777777777788999997 56666777765544544 6788999888776654 333 4
Q ss_pred eEEEEeC
Q psy4818 423 TIYHCNI 429 (734)
Q Consensus 423 ~~~~~d~ 429 (734)
.+|.+|+
T Consensus 383 ~l~~~d~ 389 (706)
T 2z3z_A 383 HFYCIDI 389 (706)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 7899998
No 111
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=3e-16 Score=182.30 Aligned_cols=298 Identities=9% Similarity=-0.004 Sum_probs=177.6
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC----CceE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG----SDWN 168 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g----~~~~ 168 (734)
...++++| .+++... + ..+++.+..++..+.+++...... ..+..++|||||++|||+.+.++ +...
T Consensus 20 ~~~~s~dg-~~~~~~~---d--~~i~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 20 FPNWISGQ-EYLHQSA---D--NNIVLYNIETGQSYTILSNRTMKS---VNASNYGLSPDRQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCEESSSS-EEEEECT---T--SCEEEEESSSCCEEEEECHHHHHT---TTCSEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCC-eEEEEcC---C--CCEEEEEcCCCcEEEEEccccccc---cceeeEEECCCCCeEEEEecCceeEEeecce
Confidence 34555788 4444331 2 247777777788888887543211 12568999999999999987443 2347
Q ss_pred EEEEEECCCCCc---ccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 169 TLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 169 ~l~v~dl~~g~~---~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
+|++||+++|+. .+.. . ....++|||||+.|+|+.. ..|+++++.++... .+...
T Consensus 91 ~i~~~d~~~g~~~~~~~l~-~--~~~~~~~SPDG~~la~~~~-----------------~~i~~~~~~~g~~~--~l~~~ 148 (719)
T 1z68_A 91 TYYIYDLSNGEFVRGNELP-R--PIQYLCWSPVGSKLAYVYQ-----------------NNIYLKQRPGDPPF--QITFN 148 (719)
T ss_dssp EEEEEETTTTEECCSSCCC-S--SBCCEEECSSTTCEEEEET-----------------TEEEEESSTTSCCE--ECCCC
T ss_pred EEEEEECCCCccccceecC-c--ccccceECCCCCEEEEEEC-----------------CeEEEEeCCCCCcE--EEecC
Confidence 899999999986 3322 2 2368999999999999862 17999998876432 11111
Q ss_pred CCCC----------------eeEEEEEEecCCcEEEEEEecCCC------------------------------CceEEE
Q psy4818 246 PNGR----------------SLGLHSEVTDCGRYLLVSTSNNTQ------------------------------GSDLHY 279 (734)
Q Consensus 246 ~~~~----------------~~~~~~~~SpDG~~l~~~~~~~~~------------------------------~~~i~~ 279 (734)
.... .....++|||||++|++...+... ...|++
T Consensus 149 ~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 149 GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence 1000 001368999999999998754221 138899
Q ss_pred EeCCCCCCC---cccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEe----cCCCCCCCceEeec---
Q psy4818 280 FDLHSLPDG---KISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTIN----LNNPCEKNWKTLIP--- 348 (734)
Q Consensus 280 ~d~~~~~~~---~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d----~~~~~~~~~~~l~~--- 348 (734)
+|++++... .+. . ...+.........+ |||||+.++...++.....+|+++| +++++ +..++.
T Consensus 229 ~d~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~---~~~~~~~~~ 302 (719)
T 1z68_A 229 IDTTYPAYVGPQEVP--V-PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD---CPKTQEHIE 302 (719)
T ss_dssp EESSCHHHHCCEECC--C-CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE---CCGGGEEEE
T ss_pred EECCCCCccceeEcc--C-CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc---eEEEEeccc
Confidence 999873210 000 0 00011111122233 9999654444445555557899999 77665 344442
Q ss_pred -CCCCcee----EEEEE-eeCCEEEEE-EEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEec--C-
Q psy4818 349 -EDENRTL----DVVAA-VANNKLIVH-YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS--F- 418 (734)
Q Consensus 349 -~~~~~~~----~~~~~-~~~~~l~~~-~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss--~- 418 (734)
.....+- ....+ ++++.+++. ...++..+|+++++.+++ .+.++.....+..+..+ +++.+++..+. .
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~ 380 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEY 380 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGC
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCC
Confidence 2211111 02233 454556653 446677899999997666 46676544445455555 77788776643 1
Q ss_pred CCCceEEEEeC
Q psy4818 419 LQPGTIYHCNI 429 (734)
Q Consensus 419 ~~P~~~~~~d~ 429 (734)
..-..+|.+++
T Consensus 381 ~~~~~l~~~~~ 391 (719)
T 1z68_A 381 PGRRNIYRISI 391 (719)
T ss_dssp TTCBEEEEEEC
T ss_pred CceEEEEEEeC
Confidence 12245788777
No 112
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.70 E-value=3.2e-16 Score=157.44 Aligned_cols=198 Identities=12% Similarity=0.051 Sum_probs=134.9
Q ss_pred CCceEEEEEEEcCCCcEEeEEEEEeccccC-CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCC
Q psy4818 455 TLFQTKQVYFRSKDGTRVPMYIIHRVGALR-NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 533 (734)
Q Consensus 455 ~~~~~~~~~~~s~dg~~i~~~~~~p~~~~~-~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g 533 (734)
..+.++...++.. +.+++|+.... +++.|+||++||+.+.. ..|. .+...|+++||.|+++|+||++
T Consensus 21 g~~~v~~~~~~~~------~~~~~p~~~~~~g~~~p~vv~~HG~~~~~--~~~~-~~~~~l~~~G~~v~~~d~~~s~--- 88 (258)
T 2fx5_A 21 GPYTVSSQSEGPS------CRIYRPRDLGQGGVRHPVILWGNGTGAGP--STYA-GLLSHWASHGFVVAAAETSNAG--- 88 (258)
T ss_dssp CSCCEEEEEETTT------EEEEEESSTTGGGCCEEEEEEECCTTCCG--GGGH-HHHHHHHHHTCEEEEECCSCCT---
T ss_pred CCcceeeeeccCc------EEEEeCCCCcccCCCceEEEEECCCCCCc--hhHH-HHHHHHHhCCeEEEEecCCCCc---
Confidence 3445555544322 78888875321 23789999999987643 2333 3456677779999999999641
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHc---------CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINK---------KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
..+|+..+++++.+. ..++.++++++|+|+||++++.++ .++.++++|+..|...
T Consensus 89 --------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~ 152 (258)
T 2fx5_A 89 --------------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTL 152 (258)
T ss_dssp --------------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCS
T ss_pred --------------cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccc
Confidence 123566666666542 246778999999999999999887 3557899988776432
Q ss_pred hccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHHHHHHhhhCC
Q psy4818 605 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGS 683 (734)
Q Consensus 605 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~~~~~ 683 (734)
. .+... ..+.. ++.| +|+++|++|..+++.. +.+++++ .
T Consensus 153 ~-----------------~~~~~------------~~~~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~---~--- 192 (258)
T 2fx5_A 153 G-----------------LGHDS------------ASQRR----QQGP-MFLMSGGGDTIAFPYLNAQPVYRR---A--- 192 (258)
T ss_dssp S-----------------TTCCG------------GGGGC----CSSC-EEEEEETTCSSSCHHHHTHHHHHH---C---
T ss_pred c-----------------cccch------------hhhcc----CCCC-EEEEEcCCCcccCchhhHHHHHhc---c---
Confidence 1 00000 11222 4556 9999999999999886 6666655 3
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 684 LPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+.++++++++++||.+..... .+....+.+||.++|.
T Consensus 193 ----~~~~~~~~~~g~~H~~~~~~~--~~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 193 ----NVPVFWGERRYVSHFEPVGSG--GAYRGPSTAWFRFQLM 229 (258)
T ss_dssp ----SSCEEEEEESSCCTTSSTTTC--GGGHHHHHHHHHHHHH
T ss_pred ----CCCeEEEEECCCCCccccchH--HHHHHHHHHHHHHHhc
Confidence 557899999999998865433 2456678899998874
No 113
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.70 E-value=6.3e-16 Score=165.78 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=100.9
Q ss_pred CceEEEEEEEcCC--C--cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC---------ccccHHHHHHHHhcCeEEE
Q psy4818 456 LFQTKQVYFRSKD--G--TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL---------PTFSISRCMFLRHFNGIYA 522 (734)
Q Consensus 456 ~~~~~~~~~~s~d--g--~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~---------~~~~~~~~~~l~~~G~~v~ 522 (734)
.....++.|.+.+ | ..+.++++.|.+....++.|+||++||+.+.... ..+.. ++..|+++||+|+
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~G~~V~ 121 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDP-LVTRLASQGYVVV 121 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSH-HHHTTGGGTCEEE
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHH-HHHHHHHCCCEEE
Confidence 4467788887764 4 3688999999886556789999999998765432 12333 3455666799999
Q ss_pred EEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc-CCCCCCcEEEEEcChHHHHHHHHHh-cCC----C-ceeE
Q psy4818 523 IPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLN-QRP----E-LYGA 595 (734)
Q Consensus 523 ~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~-~~p----~-~~~a 595 (734)
++|+||.|+.+...............+.|.+.++..+.++ +..++++++++|||+||+++++++. ..+ + .+.+
T Consensus 122 ~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~ 201 (397)
T 3h2g_A 122 GSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVA 201 (397)
T ss_dssp EECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEE
T ss_pred EecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEE
Confidence 9999997765322111100000113455666666666554 5556789999999999999988862 222 2 5788
Q ss_pred EEEcCCcchhc
Q psy4818 596 ALILVGALDML 606 (734)
Q Consensus 596 ~v~~~~~~d~~ 606 (734)
+++.++..|+.
T Consensus 202 ~~~~~~~~~l~ 212 (397)
T 3h2g_A 202 SAPISGPYALE 212 (397)
T ss_dssp EEEESCCSSHH
T ss_pred EecccccccHH
Confidence 88888877764
No 114
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.70 E-value=7.6e-16 Score=179.03 Aligned_cols=298 Identities=12% Similarity=0.083 Sum_probs=181.7
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCc----e
Q psy4818 92 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD----W 167 (734)
Q Consensus 92 ~~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~----~ 167 (734)
....+++||.+++ .. . +. .+++.+..++....+++..... ...+..++|||||++|||+....+.. .
T Consensus 20 ~~~~~spdg~~~~-~~-~--dg--~i~~~d~~~g~~~~~~~~~~~~---~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 20 PEAKWISDTEFIY-RE-Q--KG--TVRLWNVETNTSTVLIEGKKIE---SLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCBSSSSCBCC-CC-S--SS--CEEEBCGGGCCCEEEECTTTTT---TTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred cccEEcCCCcEEE-Ee-C--CC--CEEEEECCCCcEEEEecccccc---ccccceEEECCCCCEEEEEecCccceeecce
Confidence 3456778998554 32 1 22 4666666667777777654321 11367899999999999998654322 2
Q ss_pred EEEEEEECCCCCccccccccc---ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 168 NTLHIKDVDTGKDYPEVLKNV---KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~~~~~---~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
.+|++||+++|+......... ....++|||||+.|+|.+. ..||++++.++.. +.+..
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-----------------~~i~~~~~~~g~~--~~~~~ 151 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-----------------NNIYYCAHVGKQA--IRVVS 151 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-----------------TEEEEESSSSSCC--EEEEC
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-----------------CeEEEEECCCCce--EEEec
Confidence 589999999998532222111 1367999999999999873 2699999887643 23333
Q ss_pred cCCCCe----------------eEEEEEEecCCcEEEEEEecCCC------------------------------CceEE
Q psy4818 245 FPNGRS----------------LGLHSEVTDCGRYLLVSTSNNTQ------------------------------GSDLH 278 (734)
Q Consensus 245 ~~~~~~----------------~~~~~~~SpDG~~l~~~~~~~~~------------------------------~~~i~ 278 (734)
...... ....++|||||++|++....... ...|+
T Consensus 152 ~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~ 231 (723)
T 1xfd_A 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLH 231 (723)
T ss_dssp CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEE
T ss_pred CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEE
Confidence 211111 11468999999999998754210 13899
Q ss_pred EEeCCCCCCCcccCCCCceeeecc------ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-
Q psy4818 279 YFDLHSLPDGKISGKFPLKTVIPG------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED- 350 (734)
Q Consensus 279 ~~d~~~~~~~~l~~~~~~~~l~~~------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~- 350 (734)
++|+.++.. ...+... ...... .|||||+.|++.+++......|+++|++++. ...++...
T Consensus 232 ~~d~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~ 300 (723)
T 1xfd_A 232 VIGLNGPTH--------DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDES 300 (723)
T ss_dssp EEESSSSCC--------CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEEC
T ss_pred EEECCCCce--------eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc---ceEEEEecc
Confidence 999988421 1122211 111222 3999999887777765556789999998775 34443321
Q ss_pred CCcee---EEEEE-eeCCEEEEE-EEeCC----ceeEEEEE-CCCCce--eeeeCCCCceEEe-eccCcccceEEEEEec
Q psy4818 351 ENRTL---DVVAA-VANNKLIVH-YIQNV----RSVMDLHD-LNTGKR--LHSFPLDLGQITH-ISGRRKYNEVFYGFTS 417 (734)
Q Consensus 351 ~~~~~---~~~~~-~~~~~l~~~-~~~~~----~~~l~~~d-l~~g~~--~~~l~~~~g~v~~-~~~~~d~~~l~~~~ss 417 (734)
...+. ....+ ++++.+++. ...++ ..+|+++| ..+++. .+.++.....+.. +.+++|++.+++..+.
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred CCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 11110 12233 455567776 55555 56899999 544441 4566643333333 5788999988776544
Q ss_pred CCCCc--eEEEEeC
Q psy4818 418 FLQPG--TIYHCNI 429 (734)
Q Consensus 418 ~~~P~--~~~~~d~ 429 (734)
..|. .+|.+++
T Consensus 381 -~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 381 -DLPRRRQLYSANT 393 (723)
T ss_dssp -SCTTCCEEEEECS
T ss_pred -CCCcceEEEEEeC
Confidence 2233 4666665
No 115
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.69 E-value=3.3e-16 Score=155.21 Aligned_cols=215 Identities=17% Similarity=0.183 Sum_probs=134.4
Q ss_pred eEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHh--cCeEEEEEecccC------
Q psy4818 458 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRGG------ 529 (734)
Q Consensus 458 ~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~------ 529 (734)
..+.+.|.+ ..+...++.|+. ...++||++||..+.... |.. +...+.. .++.+++|+-+-.
T Consensus 14 ~~~~~~~~~---~~l~y~ii~P~~----~~~~~VI~LHG~G~~~~d--l~~-l~~~l~~~~~~~~~i~P~Ap~~~~~~~~ 83 (246)
T 4f21_A 14 GTENLYFQS---NAMNYELMEPAK----QARFCVIWLHGLGADGHD--FVD-IVNYFDVSLDEIRFIFPHADIIPVTINM 83 (246)
T ss_dssp ------------CCCCEEEECCSS----CCCEEEEEEEC--CCCCC--GGG-GGGGCCSCCTTEEEEEECGGGSCTTTHH
T ss_pred ccceEEEec---CCcCceEeCCCC----cCCeEEEEEcCCCCCHHH--HHH-HHHHhhhcCCCeEEEeCCCCccccccCC
Confidence 345565654 346777888864 456799999995333222 221 1222321 2788888875321
Q ss_pred CCCCchhhhcccccc-------CCCchhHHHHHHHHHHH---cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEc
Q psy4818 530 GELGEDWHNAGRLLK-------KQNCFDDFQAAAEYMIN---KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 599 (734)
Q Consensus 530 ~~~g~~~~~~~~~~~-------~~~~~~D~~~~~~~l~~---~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 599 (734)
+..|..|+....... ....+....+.++.+++ +.-++++||++.|+|+||.+++.++.++|+.|+++|+.
T Consensus 84 ~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~ 163 (246)
T 4f21_A 84 GMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMAL 163 (246)
T ss_dssp HHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEE
T ss_pred CCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceeh
Confidence 112345654321111 11123333344444432 23489999999999999999999999999999999999
Q ss_pred CCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHh
Q psy4818 600 VGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 679 (734)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~ 679 (734)
+|.+..... +- ... .... .++| +|++||+.|++||+..+.++++.|++
T Consensus 164 sG~lp~~~~------------~~-----------~~~---~~~~-----~~~P-vl~~HG~~D~vVp~~~~~~~~~~L~~ 211 (246)
T 4f21_A 164 STYLPAWDN------------FK-----------GKI---TSIN-----KGLP-ILVCHGTDDQVLPEVLGHDLSDKLKV 211 (246)
T ss_dssp SCCCTTHHH------------HS-----------TTC---CGGG-----TTCC-EEEEEETTCSSSCHHHHHHHHHHHHT
T ss_pred hhccCcccc------------cc-----------ccc---cccc-----cCCc-hhhcccCCCCccCHHHHHHHHHHHHH
Confidence 885421110 00 000 0000 2344 99999999999999999999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 680 KIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+ |.++++..|++.||.+. .++..++.+||.+.|++
T Consensus 212 ~-------g~~v~~~~y~g~gH~i~------~~~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 212 S-------GFANEYKHYVGMQHSVC------MEEIKDISNFIAKTFKI 246 (246)
T ss_dssp T-------TCCEEEEEESSCCSSCC------HHHHHHHHHHHHHHTTC
T ss_pred C-------CCCeEEEEECCCCCccC------HHHHHHHHHHHHHHhCC
Confidence 8 99999999999999875 24456789999999864
No 116
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.69 E-value=3.2e-16 Score=147.19 Aligned_cols=173 Identities=13% Similarity=0.088 Sum_probs=120.0
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
++.|+||++||..+....+.+. .+...|+++||.|+.+|+||.|... .. .......+++.++++++.+..
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~---~~----~~~~~~~~~~~~~~~~~~~~~-- 71 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVT-ALAEVAERLGWTHERPDFTDLDARR---DL----GQLGDVRGRLQRLLEIARAAT-- 71 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHH-HHHHHHHHTTCEEECCCCHHHHTCG---GG----CTTCCHHHHHHHHHHHHHHHH--
T ss_pred CCCcEEEEEeCCCCCccHHHHH-HHHHHHHHCCCEEEEeCCCCCCCCC---CC----CCCCCHHHHHHHHHHHHHhcC--
Confidence 4678999999986554332222 3456777789999999999954321 11 111122334455666666543
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 645 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p 645 (734)
+.++++++|+|+||.+++.++.++| ++++|+.+|..+...+. . ...
T Consensus 72 ~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~---------------~----------------~~~- 117 (176)
T 2qjw_A 72 EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP---------------A----------------LDA- 117 (176)
T ss_dssp TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC---------------C----------------CCC-
T ss_pred CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC---------------c----------------ccc-
Confidence 4578999999999999999999988 89999988876542110 0 222
Q ss_pred CCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 646 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 646 ~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++.| +|+++|++|..||+.++.++++.+ . ++++++ ++||.+... ..+....+.+||.
T Consensus 118 ---~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-~-----------~~~~~~-~~~H~~~~~---~~~~~~~i~~fl~ 174 (176)
T 2qjw_A 118 ---AAVP-ISIVHAWHDELIPAADVIAWAQAR-S-----------ARLLLV-DDGHRLGAH---VQAASRAFAELLQ 174 (176)
T ss_dssp ---CSSC-EEEEEETTCSSSCHHHHHHHHHHH-T-----------CEEEEE-SSCTTCTTC---HHHHHHHHHHHHH
T ss_pred ---cCCC-EEEEEcCCCCccCHHHHHHHHHhC-C-----------ceEEEe-CCCcccccc---HHHHHHHHHHHHH
Confidence 4556 999999999999999998888876 2 267777 899998422 2355666777775
No 117
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.68 E-value=4.2e-16 Score=158.00 Aligned_cols=223 Identities=12% Similarity=0.043 Sum_probs=141.1
Q ss_pred eEEEEEEEcCC-CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCC--
Q psy4818 458 QTKQVYFRSKD-GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELG-- 533 (734)
Q Consensus 458 ~~~~~~~~s~d-g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g-- 533 (734)
..+.+.+.|.. |.++.+++++|+++++++++|+|++.||+..... ....+...+++ .+.+|+.++++++..+.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~---~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~ 88 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR---LDDELLKQLSEKTPPVIVAVGYQTNLPFDLN 88 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH---CCHHHHHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH---HHHHHHHHhccCCCeEEEEEcCCCCCcCccc
Confidence 57788888876 6799999999999876778998877777542211 11223344443 57888888987643211
Q ss_pred ---chhhhcc-c-----------cc-cCCCchhHHHH--HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeE
Q psy4818 534 ---EDWHNAG-R-----------LL-KKQNCFDDFQA--AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGA 595 (734)
Q Consensus 534 ---~~~~~~~-~-----------~~-~~~~~~~D~~~--~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a 595 (734)
.++.... . .. .+...+.+++. .+.++.++..+|++|++|+|+|+||++++.++.+ |++|++
T Consensus 89 ~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~ 167 (278)
T 2gzs_A 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRS 167 (278)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSE
T ss_pred ccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCe
Confidence 1221110 0 00 01112333331 2333334445889999999999999999999999 999999
Q ss_pred EEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCC--------CC
Q psy4818 596 ALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV--------PP 667 (734)
Q Consensus 596 ~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v--------~~ 667 (734)
+++.+|.+.+.. ......+..+.+- . ...++++|.+|+.|..+ +.
T Consensus 168 ~~~~s~~~~~~~-------------------~~~~~~~~~~~~~----~----~~~~~i~l~~G~~d~~~~~~~~~~~~~ 220 (278)
T 2gzs_A 168 YYSASPSLGRGY-------------------DALLSRVTAVEPL----Q----FCTKHLAIMEGSATQGDNRETHAVGVL 220 (278)
T ss_dssp EEEESGGGSTTH-------------------HHHHHHHHTSCTT----T----TTTCEEEEEECCC-----------CHH
T ss_pred EEEeCcchhcCc-------------------chHHHHHHHhhcc----C----CCCCcEEEEecCccccccccchhhhhH
Confidence 999998653211 0111122222210 1 12234999999999874 47
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.++.+++++|++. |.++++.++++++|++.. .....+.+.||.+
T Consensus 221 ~~~~~~~~~L~~~-------g~~~~~~~~~g~~H~~~~-----~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 221 SKIHTTLTILKDK-------GVNAVFWDFPNLGHGPMF-----NASFRQALLDISG 264 (278)
T ss_dssp HHHHHHHHHHHHT-------TCCEEEEECTTCCHHHHH-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC-------CCeeEEEEcCCCCccchh-----HHHHHHHHHHHhh
Confidence 8999999999998 999999999999997532 1223445667764
No 118
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=1.6e-14 Score=147.12 Aligned_cols=257 Identities=9% Similarity=0.012 Sum_probs=162.9
Q ss_pred eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC-CCcccccccc--ccc
Q psy4818 114 HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLKN--VKF 190 (734)
Q Consensus 114 ~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~-g~~~~~~~~~--~~~ 190 (734)
...|++.+..++..+.++... ..+..++|||||++|++..+ ..|+++|+++ ++........ ...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-------ELFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-------SCCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred ceeEEEEeCCCCceeeeccCC-------cceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccc
Confidence 356777776666666555532 23678999999999999752 2799999999 8754332221 234
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
..+.|||||+.|++...+. ....+||.+++.++... .+ ... . ....+.|||||++|++....
T Consensus 88 ~~~~~spdg~~l~~~~~~~------------~~~~~l~~~~~~~~~~~--~~-~~~--~-~~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVE------------FGKSAIYLLPSTGGTPR--LM-TKN--L-PSYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp SCCEECTTSSEEEEEECTT------------TSSCEEEEEETTCCCCE--EC-CSS--S-SEEEEEECTTSSEEEEEEEE
T ss_pred cceEECCCCCEEEEEEeCC------------CCcceEEEEECCCCceE--Ee-ecC--C-CccceEECCCCCEEEEEECC
Confidence 6799999999999987432 13458999988765421 22 111 1 24568999999999987654
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 349 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 349 (734)
.. ...||.+++.++. ...+......... .|+|||+.|++.+..++ ..+|+.+++.++. ...+...
T Consensus 150 ~~-~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~~---~~~~~~~ 215 (297)
T 2ojh_A 150 DQ-VFDIYSMDIDSGV---------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGSS---VERITDS 215 (297)
T ss_dssp TT-EEEEEEEETTTCC---------EEECCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSSC---EEECCCC
T ss_pred CC-ceEEEEEECCCCc---------ceEcccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCCC---cEEEecC
Confidence 32 2578888887621 2223322222233 39999999998876543 5679988876654 3444333
Q ss_pred CCCceeEEEEEe-eCCEEEEEEEeC--------CceeEEEEECCCCceeeeeC--CCCceEEeeccCcccceEEEEEec
Q psy4818 350 DENRTLDVVAAV-ANNKLIVHYIQN--------VRSVMDLHDLNTGKRLHSFP--LDLGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 350 ~~~~~~~~~~~~-~~~~l~~~~~~~--------~~~~l~~~dl~~g~~~~~l~--~~~g~v~~~~~~~d~~~l~~~~ss 417 (734)
. ..+..+.+. +++.+++..... ....|++||+.+++...... ...+.+..+.++|+++.+++....
T Consensus 216 ~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 216 A--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp S--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred C--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 2 334444454 445566655543 23679999997776532222 224456678889999888776554
No 119
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.67 E-value=3.5e-16 Score=166.92 Aligned_cols=208 Identities=14% Similarity=0.142 Sum_probs=135.0
Q ss_pred CcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCc--------------
Q psy4818 469 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE-------------- 534 (734)
Q Consensus 469 g~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~-------------- 534 (734)
...+|.....|.. .+++.|+||++||+.+.... |. .++..|+++||+|+++|+||++....
T Consensus 81 ~~~~p~~~~~P~~--~~~~~P~Vv~~HG~~~~~~~--~~-~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~ 155 (383)
T 3d59_A 81 SMTTPANWNSPLR--PGEKYPLVVFSHGLGAFRTL--YS-AIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDK 155 (383)
T ss_dssp TCEESSEETCCBC--CSSCEEEEEEECCTTCCTTT--TH-HHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCC
T ss_pred ceeeccccCCCcc--cCCCCCEEEEcCCCCCCchH--HH-HHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCc
Confidence 3455555544432 24578999999998665432 33 35567778899999999999764321
Q ss_pred hhhhc----cccc------cCCCchhHHHHHHHHHHH--------------------cCCCCCCcEEEEEcChHHHHHHH
Q psy4818 535 DWHNA----GRLL------KKQNCFDDFQAAAEYMIN--------------------KKYTKPKYITIMGGSNGGLLVGA 584 (734)
Q Consensus 535 ~~~~~----~~~~------~~~~~~~D~~~~~~~l~~--------------------~~~~d~~ri~i~G~S~GG~~~~~ 584 (734)
.|... +... .-....+|+..++++|.+ .+.+|++||+++|||+||++++.
T Consensus 156 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~ 235 (383)
T 3d59_A 156 SWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQ 235 (383)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHH
T ss_pred eeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHH
Confidence 11100 0000 001124688889999876 45678899999999999999999
Q ss_pred HHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCC
Q psy4818 585 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDR 664 (734)
Q Consensus 585 ~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~ 664 (734)
++.+.| .++++|+..|... |...+ .+.+ ++.| +|++||++|..
T Consensus 236 ~a~~~~-~v~a~v~~~~~~~-------------------p~~~~---------~~~~-------i~~P-~Lii~g~~D~~ 278 (383)
T 3d59_A 236 TLSEDQ-RFRCGIALDAWMF-------------------PLGDE---------VYSR-------IPQP-LFFINSEYFQY 278 (383)
T ss_dssp HHHHCT-TCCEEEEESCCCT-------------------TCCGG---------GGGS-------CCSC-EEEEEETTTCC
T ss_pred HHhhCC-CccEEEEeCCccC-------------------CCchh---------hhcc-------CCCC-EEEEecccccc
Confidence 988766 5899998887431 11111 1122 4455 99999999974
Q ss_pred CCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC--------------------chHHhHHHH-HHHHHHHHH
Q psy4818 665 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT--------------------PLMKSIEEM-TDIYVFLMK 723 (734)
Q Consensus 665 v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~--------------------~~~~~~~~~-~~~~~fl~~ 723 (734)
+ +..+..++|.+. +.+.+++++++++|.+.. ......+.+ +.+++||.+
T Consensus 279 ~---~~~~~~~~l~~~-------~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~ 348 (383)
T 3d59_A 279 P---ANIIKMKKCYSP-------DKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQK 348 (383)
T ss_dssp H---HHHHHHHTTCCT-------TSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred h---hhHHHHHHHHhc-------CCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHH
Confidence 3 222333444444 778999999999998621 122122333 458999999
Q ss_pred HcCCC
Q psy4818 724 SLGLK 728 (734)
Q Consensus 724 ~l~~~ 728 (734)
+|+..
T Consensus 349 ~L~~~ 353 (383)
T 3d59_A 349 HLGLH 353 (383)
T ss_dssp HHTCC
T ss_pred HcCCc
Confidence 99754
No 120
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.67 E-value=4.7e-17 Score=157.76 Aligned_cols=192 Identities=14% Similarity=0.007 Sum_probs=128.4
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHH-HHHHHHhcCeEEEEEecccCCCCCchhhhccccccC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 545 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~ 545 (734)
.+|.++.+..+.|++ +++.|+||++||+.+... .|... +...|+++||.|+++|+||.|... ..... ..-
T Consensus 14 ~~g~~l~~~~~~p~~---~~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~---~~~~~-~~~ 84 (210)
T 1imj_A 14 VQGQALFFREALPGS---GQARFSVLLLHGIRFSSE--TWQNLGTLHRLAQAGYRAVAIDLPGLGHSK---EAAAP-API 84 (210)
T ss_dssp ETTEEECEEEEECSS---SCCSCEEEECCCTTCCHH--HHHHHTHHHHHHHTTCEEEEECCTTSGGGT---TSCCS-SCT
T ss_pred eCCeEEEEEEeCCCC---CCCCceEEEECCCCCccc--eeecchhHHHHHHCCCeEEEecCCCCCCCC---CCCCc-chh
Confidence 388899999998864 356899999999865543 23332 356677789999999999954322 11100 011
Q ss_pred CCch--hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCC
Q psy4818 546 QNCF--DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 623 (734)
Q Consensus 546 ~~~~--~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 623 (734)
.... +|+.+.++.+ +.++++++|+|+||.+++.++.++|+.++++|+.+|..... +
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------~------ 142 (210)
T 1imj_A 85 GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------I------ 142 (210)
T ss_dssp TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------S------
T ss_pred hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc----------c------
Confidence 1111 4555555554 34689999999999999999999999999999998875321 0
Q ss_pred CCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC
Q psy4818 624 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 703 (734)
Q Consensus 624 ~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~ 703 (734)
... .+ .. ++.| +|+++|++|. ++++.+.++ + . -...++.+++++||.+
T Consensus 143 --~~~---~~------~~-------~~~p-~l~i~g~~D~-~~~~~~~~~-~----~-------~~~~~~~~~~~~~H~~ 190 (210)
T 1imj_A 143 --NAA---NY------AS-------VKTP-ALIVYGDQDP-MGQTSFEHL-K----Q-------LPNHRVLIMKGAGHPC 190 (210)
T ss_dssp --CHH---HH------HT-------CCSC-EEEEEETTCH-HHHHHHHHH-T----T-------SSSEEEEEETTCCTTH
T ss_pred --cch---hh------hh-------CCCC-EEEEEcCccc-CCHHHHHHH-h----h-------CCCCCEEEecCCCcch
Confidence 111 11 11 4455 9999999999 887666544 3 2 2346889999999986
Q ss_pred CCchHHhHHHHHHHHHHHHH
Q psy4818 704 GTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 704 ~~~~~~~~~~~~~~~~fl~~ 723 (734)
..... .+..+.+.+||.+
T Consensus 191 ~~~~~--~~~~~~i~~fl~~ 208 (210)
T 1imj_A 191 YLDKP--EEWHTGLLDFLQG 208 (210)
T ss_dssp HHHCH--HHHHHHHHHHHHT
T ss_pred hhcCH--HHHHHHHHHHHHh
Confidence 42221 3445667777764
No 121
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.67 E-value=3e-16 Score=167.50 Aligned_cols=223 Identities=13% Similarity=0.102 Sum_probs=145.4
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeE----EEEEecccCCCC
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGI----YAIPNIRGGGEL 532 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~----v~~~~~rG~~~~ 532 (734)
..+.+.+.|. .|..+.+++|.|+++. .+++|+|+++||+...... .+. ..+..|.++|++ |+.+|++|++..
T Consensus 167 ~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~-~~~-~~~~~l~~~g~~~p~iVV~~d~~~~~~r 243 (403)
T 3c8d_A 167 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM-PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHR 243 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTS-CCH-HHHHHHHHTTSSCSCEEEEECCCSHHHH
T ss_pred ceEEEEEEccccCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcC-cHH-HHHHHHHHcCCCCCeEEEEECCCCCccc
Confidence 4567777775 6778999999998753 5689999999996322111 122 234555556875 999999863211
Q ss_pred CchhhhccccccCCCchhHHH--HHHHHHHHcC--CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQ--AAAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 608 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 608 (734)
...+ .....+.+++ .++.++.++. ..|+++++|+|+|+||++++.++.++|++|+++++.+|.+++...
T Consensus 244 ~~~~-------~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~ 316 (403)
T 3c8d_A 244 AHEL-------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 316 (403)
T ss_dssp HHHS-------SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred cccC-------CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCC
Confidence 1110 0122344543 3566766542 358899999999999999999999999999999999998754321
Q ss_pred cccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC
Q psy4818 609 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 688 (734)
Q Consensus 609 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~ 688 (734)
. .+......+.+.. .+ ... .. ++++|.+|+.|..+ +.++.+++++|+++ |
T Consensus 317 ~-------------~~~~~~~~~~~~~-~~---~~~----~~-~~i~l~~G~~D~~~-~~~~~~l~~~L~~~-------G 366 (403)
T 3c8d_A 317 G-------------GQQEGVLLEKLKA-GE---VSA----EG-LRIVLEAGIREPMI-MRANQALYAQLHPI-------K 366 (403)
T ss_dssp T-------------SSSCCHHHHHHHT-TS---SCC----CS-CEEEEEEESSCHHH-HHHHHHHHHHTGGG-------T
T ss_pred C-------------CCcHHHHHHHHHh-cc---ccC----CC-ceEEEEeeCCCchh-HHHHHHHHHHHHhC-------C
Confidence 0 1111112222222 11 111 23 34999999998754 67899999999998 9
Q ss_pred CcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 689 NPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.++++.++++ ||.+. ...+...+.+.||.+.+
T Consensus 367 ~~v~~~~~~G-gH~~~----~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 367 ESIFWRQVDG-GHDAL----CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp TSEEEEEESC-CSCHH----HHHHHHHHHHHHHHGGG
T ss_pred CCEEEEEeCC-CCCHH----HHHHHHHHHHHHHhccc
Confidence 9999999999 69752 12345566788887654
No 122
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.66 E-value=1.1e-15 Score=162.68 Aligned_cols=251 Identities=10% Similarity=-0.014 Sum_probs=155.4
Q ss_pred CCceEEEEEEEcCC--CcE--EeEEEEEeccccCCCCCcEEEEecCCCCCc--CCcc----------------ccHH-HH
Q psy4818 455 TLFQTKQVYFRSKD--GTR--VPMYIIHRVGALRNRRNPVIIYGYGGYGVS--VLPT----------------FSIS-RC 511 (734)
Q Consensus 455 ~~~~~~~~~~~s~d--g~~--i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~--~~~~----------------~~~~-~~ 511 (734)
......++.|+|.| |.. +.+.++.|++. .++.|+|.|.||-.+.. -.|+ +... +.
T Consensus 71 ~~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~ 148 (462)
T 3guu_A 71 NNAASFQLQYRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIII 148 (462)
T ss_dssp TTCEEEEEEEEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHH
T ss_pred CCceEEEEEEEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHH
Confidence 34478888888875 433 67899999874 23589999999965432 1111 1112 23
Q ss_pred HHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC--
Q psy4818 512 MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-- 589 (734)
Q Consensus 512 ~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-- 589 (734)
.++.++||+|+++||+|-| ..|..... ....+.|.+.++..+. +.....+++++|+|+||..+++++...
T Consensus 149 ~~~l~~G~~Vv~~Dy~G~G---~~y~~~~~---~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~ 220 (462)
T 3guu_A 149 GWALQQGYYVVSSDHEGFK---AAFIAGYE---EGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAES 220 (462)
T ss_dssp HHHHHTTCEEEEECTTTTT---TCTTCHHH---HHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEecCCCCC---CcccCCcc---hhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChh
Confidence 4414579999999999944 33332211 1122345555555443 332347999999999999999988754
Q ss_pred --CC-ceeEEEEcCCcchhccccccccCccc---------------------cccc------------------------
Q psy4818 590 --PE-LYGAALILVGALDMLRFNKFTIAYYS---------------------ESEF------------------------ 621 (734)
Q Consensus 590 --p~-~~~a~v~~~~~~d~~~~~~~~~~~~~---------------------~~~~------------------------ 621 (734)
|+ .++++++..+..|+........+..+ ..++
T Consensus 221 yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~ 300 (462)
T 3guu_A 221 YAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVL 300 (462)
T ss_dssp HCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHH
T ss_pred hcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHH
Confidence 45 47888888887665433210000000 0000
Q ss_pred ------------CC-C-CCHHHHHHHHhCCccC-CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCC
Q psy4818 622 ------------GS-P-NNKTHFHNLLSYSPLH-NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 686 (734)
Q Consensus 622 ------------g~-~-~~~~~~~~~~~~sp~~-~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~ 686 (734)
|. + .++...+.+.+.+.-. ....+....+.| +||+||.+|.+||+.++.++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~P-vlI~hG~~D~vVP~~~s~~l~~~l~~~------ 373 (462)
T 3guu_A 301 TYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFP-RFIWHAIPDEIVPYQPAATYVKEQCAK------ 373 (462)
T ss_dssp HCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSE-EEEEEETTCSSSCHHHHHHHHHHHHHT------
T ss_pred hhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCC-EEEEeCCCCCcCCHHHHHHHHHHHHHc------
Confidence 00 0 0111222233222200 000000014555 999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 687 QKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 687 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
|.++++++|++++|+... .....++++||.++|...
T Consensus 374 -G~~V~~~~y~~~~H~~~~-----~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 374 -GANINFSPYPIAEHLTAE-----IFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp -TCEEEEEEESSCCHHHHH-----HHTHHHHHHHHHHHHHTC
T ss_pred -CCCeEEEEECcCCccCch-----hhhHHHHHHHHHHHhCCC
Confidence 899999999999997642 234667899999999665
No 123
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.66 E-value=8.5e-16 Score=160.13 Aligned_cols=202 Identities=14% Similarity=0.042 Sum_probs=137.2
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccH------HHHHHHHhcCeEEEEEecccCCCCCchhhhcc----
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI------SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG---- 540 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~------~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~---- 540 (734)
.+.+.++.|.+ .+.|.||++||+..... .|.. .++..|+++||.|+++|+||.|..+..-....
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~~~--~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLTGM--TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCCGG--GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCCCC--ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 35566666764 23477999999864443 2331 24566667899999999999665442210000
Q ss_pred ------------------------cc-ccC---------CCchhH------------------HHHHHHHHHHcCCCCCC
Q psy4818 541 ------------------------RL-LKK---------QNCFDD------------------FQAAAEYMINKKYTKPK 568 (734)
Q Consensus 541 ------------------------~~-~~~---------~~~~~D------------------~~~~~~~l~~~~~~d~~ 568 (734)
.. .+. ...+++ +.+++..++++- +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----C
Confidence 00 000 000222 555666665542 2
Q ss_pred cEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCC
Q psy4818 569 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 648 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~ 648 (734)
++.++|||+||.+++.++.++|++++++|+..|..- ... ..... .
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~--------------------~~~------------~~~~~---~ 243 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC--------------------PKP------------EDVKP---L 243 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC--------------------CCG------------GGCGG---G
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC--------------------CCH------------HHHhh---c
Confidence 799999999999999999999999999999887530 000 00111 0
Q ss_pred ccCCcEEEEecCCCCCCCC-----hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCC-----CCCCCchHHhHHHHHHHH
Q psy4818 649 TQYPATLVLTGDHDDRVPP-----LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAG-----HGQGTPLMKSIEEMTDIY 718 (734)
Q Consensus 649 ~~~P~~Li~~g~~D~~v~~-----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~g-----H~~~~~~~~~~~~~~~~~ 718 (734)
.+.| +||++|++|..+++ .++.++++.+++. |..+++++++++| |.+....+ ..+....+.
T Consensus 244 ~~~P-vLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~~~gi~G~~H~~~~~~~-~~~~~~~i~ 314 (328)
T 1qlw_A 244 TSIP-VLVVFGDHIEEFPRWAPRLKACHAFIDALNAA-------GGKGQLMSLPALGVHGNSHMMMQDRN-NLQVADLIL 314 (328)
T ss_dssp TTSC-EEEEECSSCTTCTTTHHHHHHHHHHHHHHHHT-------TCCEEEEEGGGGTCCCCCTTGGGSTT-HHHHHHHHH
T ss_pred cCCC-EEEEeccCCccccchhhHHHHHHHHHHHHHHh-------CCCceEEEcCCCCcCCCcccchhccC-HHHHHHHHH
Confidence 3455 99999999999997 8899999999988 8889999999666 98765542 246777889
Q ss_pred HHHHHHcC
Q psy4818 719 VFLMKSLG 726 (734)
Q Consensus 719 ~fl~~~l~ 726 (734)
+||.+++.
T Consensus 315 ~fl~~~~~ 322 (328)
T 1qlw_A 315 DWIGRNTA 322 (328)
T ss_dssp HHHHHTCC
T ss_pred HHHHhccc
Confidence 99998875
No 124
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.66 E-value=6.8e-15 Score=160.41 Aligned_cols=229 Identities=14% Similarity=0.033 Sum_probs=139.1
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
..+.+.+.||..|..... +..|+||++||+.+.... |.. +...|+++||.|+++|+||.|....
T Consensus 4 i~~~~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~~~~--~~~-l~~~La~~Gy~Vi~~D~rG~G~S~~----- 67 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDH--------GTGVPVVLIHGFPLSGHS--WER-QSAALLDAGYRVITYDRRGFGQSSQ----- 67 (456)
T ss_dssp EEEEEETTEEEEEEEEEE--------SSSEEEEEECCTTCCGGG--GTT-HHHHHHHHTEEEEEECCTTSTTSCC-----
T ss_pred EeecccccCCeEEEEEEe--------CCCCEEEEECCCCCcHHH--HHH-HHHHHHHCCcEEEEECCCCCCCCCC-----
Confidence 345556677776653321 245899999998765543 443 3456656799999999999665431
Q ss_pred cccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhccccccccCcc--
Q psy4818 540 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFNKFTIAYY-- 616 (734)
Q Consensus 540 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~~~~~-- 616 (734)
......++++.+.+..+++. ++.++++++|+|+||++++.++.++ |+.++++|+.+|...............
T Consensus 68 ---~~~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 142 (456)
T 3vdx_A 68 ---PTTGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAP 142 (456)
T ss_dssp ---CSSCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBC
T ss_pred ---CCCCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccch
Confidence 11234555655555555443 3456899999999999888888776 899999999998764322110000000
Q ss_pred -----------------c----ccc-cC------CCCCHHHHHHH----------------Hh--CCccCCCCCCCCCcc
Q psy4818 617 -----------------S----ESE-FG------SPNNKTHFHNL----------------LS--YSPLHNIKVPPNNTQ 650 (734)
Q Consensus 617 -----------------~----~~~-~g------~~~~~~~~~~~----------------~~--~sp~~~~~~p~~~~~ 650 (734)
+ ... +. .....+....+ .. .+....+.. ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~ 218 (456)
T 3vdx_A 143 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPR----ID 218 (456)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTT----CC
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhh----CC
Confidence 0 000 00 01111111110 00 111223333 67
Q ss_pred CCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 651 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 651 ~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
.| +|+++|++|..||+.+..+.++++ ...+++++++++||.+..... .+....+.+||.+++.
T Consensus 219 ~P-vLiI~G~~D~~vp~~~~~~~l~~~----------~~~~~~~~i~gagH~~~~e~p--~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 219 VP-ALILHGTGDRTLPIENTARVFHKA----------LPSAEYVEVEGAPHGLLWTHA--EEVNTALLAFLAKALE 281 (456)
T ss_dssp SC-CEEEEETTCSSSCGGGTHHHHHHH----------CTTSEEEEETTCCSCTTTTTH--HHHHHHHHHHHHHHHH
T ss_pred CC-EEEEEeCCCCCcCHHHHHHHHHHH----------CCCceEEEeCCCCCcchhhCH--HHHHHHHHHHHHHhhc
Confidence 77 999999999999998443333332 223578899999998765433 4667778999998763
No 125
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.66 E-value=2.6e-16 Score=168.98 Aligned_cols=239 Identities=14% Similarity=0.106 Sum_probs=145.6
Q ss_pred EEcCCCcEEeEEEEEecc---ccCCCCCcEEEEecCCCCCcCCccccHHHHHHHH----hcCe---EEEEEecccCCCCC
Q psy4818 464 FRSKDGTRVPMYIIHRVG---ALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR----HFNG---IYAIPNIRGGGELG 533 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~---~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~----~~G~---~v~~~~~rG~~~~g 533 (734)
+.+.||.+|.+..+.|.+ ..+.++.|+||++||..+.... |... ...|+ +.|| .|+++|+||. |
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~--~~~~-~~~L~~~~~~~G~~~~~vi~~D~~G~---G 98 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV--WEYY-LPRLVAADAEGNYAIDKVLLIDQVNH---G 98 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG--GGGG-GGGSCCCBTTTTEEEEEEEEECCTTS---H
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH--HHHH-HHHHHHhhhhcCcceeEEEEEcCCCC---C
Confidence 456799999999998865 1223456899999998665543 3332 24454 3489 9999999994 4
Q ss_pred chhhhccccccCCCchhHHHHHHHHHHHc-C---CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-
Q psy4818 534 EDWHNAGRLLKKQNCFDDFQAAAEYMINK-K---YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF- 608 (734)
Q Consensus 534 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~- 608 (734)
..-............++++...+..+++. . .+++.++.++|+|+||.+++.++.++|++++++|+.+|.......
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 33221100011233455554444443332 2 145556999999999999999999999999999999887654110
Q ss_pred ------cc---------------cccCcccc---------c--ccCCCCCHHHHHHHHhC--------------------
Q psy4818 609 ------NK---------------FTIAYYSE---------S--EFGSPNNKTHFHNLLSY-------------------- 636 (734)
Q Consensus 609 ------~~---------------~~~~~~~~---------~--~~g~~~~~~~~~~~~~~-------------------- 636 (734)
.. ......|. . .+.....++..+.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 00 00000000 0 01111222222222210
Q ss_pred --------C--------ccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCC
Q psy4818 637 --------S--------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAG 700 (734)
Q Consensus 637 --------s--------p~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~g 700 (734)
. ....+.. +++| +|+++|++|..||+..+.++++.+. .+++++++++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vLii~G~~D~~~~~~~~~~l~~~~~-----------~~~~~~~~~~g 322 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKF----VRKR-TIHIVGARSNWCPPQNQLFLQKTLQ-----------NYHLDVIPGGS 322 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGG----CCSE-EEEEEETTCCSSCHHHHHHHHHHCS-----------SEEEEEETTCC
T ss_pred chhhhhhhcccccchHHHHHhccc----cCCC-EEEEEcCCCCCCCHHHHHHHHHhCC-----------CceEEEeCCCC
Confidence 0 0011222 5666 9999999999999988776666543 35889999999
Q ss_pred CCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 701 HGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 701 H~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
|...... ..+....+.+||.+++.
T Consensus 323 H~~~~e~--p~~~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 323 HLVNVEA--PDLVIERINHHIHEFVL 346 (398)
T ss_dssp TTHHHHS--HHHHHHHHHHHHHHHHH
T ss_pred ccchhcC--HHHHHHHHHHHHHHHHH
Confidence 9764332 24566678899988774
No 126
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=1.1e-14 Score=155.79 Aligned_cols=296 Identities=7% Similarity=-0.030 Sum_probs=177.8
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 172 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v 172 (734)
.+.++|+|.+++|....++. ..||+.+..+++...++.... .....+.|||||++|+|..... +|++
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~------~~~~~~~~spdg~~l~~~~~~~-----~l~~ 106 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKG------DNTFGGFISTDERAFFYVKNEL-----NLMK 106 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSC------BCTTTCEECTTSSEEEEEETTT-----EEEE
T ss_pred cCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCC------CccccceECCCCCEEEEEEcCC-----cEEE
Confidence 45667999999999876543 457888876666555544221 1112378999999999988543 6999
Q ss_pred EECCCCCcccccccccccCeeEEEcCCcEEEEEEEecC--------CCCCCCCcc------cccCCcEEEEEECCCCCCC
Q psy4818 173 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDI--------NGTADGTET------TAHMGQKIYYHVLGTEQDK 238 (734)
Q Consensus 173 ~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~--------~~~~~~~~~------~~~~~~~l~~~~l~t~~~~ 238 (734)
+|+.+|+......... .|+|||+.|+|...+.. .-.+++... .......|+++++.++..
T Consensus 107 ~d~~~~~~~~~~~~~~-----~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~- 180 (396)
T 3c5m_A 107 VDLETLEEQVIYTVDE-----EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL- 180 (396)
T ss_dssp EETTTCCEEEEEECCT-----TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-
T ss_pred EECCCCCcEEEEeccc-----ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-
Confidence 9999987543322111 28888888877432100 000011100 002345899999987643
Q ss_pred CeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCC--CceEEEEeCCCCCCCcccCCCCceeeeccc-c-ceE-EEEEe
Q psy4818 239 DIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPGM-D-HHH-EIIAN 312 (734)
Q Consensus 239 ~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~--~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-~-~~~-~~~s~ 312 (734)
..+... ......+.||| ||++|++....... ..+||+++++++. +..+.... . ... ..|+|
T Consensus 181 -~~~~~~---~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---------~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 181 -EVIHQD---TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---------VRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp -EEEEEE---SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---------CEESSCCCTTEEEEEEEECT
T ss_pred -EeeccC---CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---------eeEeeccCCCccccceEECC
Confidence 233332 22456789999 89999987642211 1589999997732 22233211 1 111 24999
Q ss_pred cCCeEEEEeCCCCC-CceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEe--------------CCce
Q psy4818 313 NGPELIVKTTKNAP-KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQ--------------NVRS 376 (734)
Q Consensus 313 dg~~l~~~s~~~~~-~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~--------------~~~~ 376 (734)
||+.|++.++..+. ...|+++|++++. .+.+.... ... ..... + +.+++.... ++..
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~-~~~--~~~s~~d-g~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVMVMP-PCS--HLMSNFD-GSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEEECC-SEE--EEEECSS-SSEEEEEECCC----------CCCCCC
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCC---eEEeeeCC-CCC--CCccCCC-CceEEEecCCcceeeccccccccCCCC
Confidence 99999988765432 2459999998765 34443322 222 22334 5 444444321 2446
Q ss_pred eEEEEECCCCceeeeeCCCCc-----------eEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLG-----------QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g-----------~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|+++|+.+|+. +.++.... ....+.+++|++.+++..+. ..+..+|.+|+
T Consensus 321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~ 382 (396)
T 3c5m_A 321 FLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIADV 382 (396)
T ss_dssp EEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEEC
T ss_pred cEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-CCCceEEEEEE
Confidence 899999977764 45543322 13346678899888776554 34567999998
No 127
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.65 E-value=3.7e-15 Score=150.61 Aligned_cols=221 Identities=20% Similarity=0.193 Sum_probs=128.4
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+...||.+|..... +..|.||++||..+... .|... ...|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~-------- 63 (271)
T 3ia2_A 3 FVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDAD--MWEYQ-MEYLSSRGYRTIAFDRRGFGRSDQP-------- 63 (271)
T ss_dssp EECTTSCEEEEEEE--------SSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTSCCC--------
T ss_pred EEcCCCCEEEEEcc--------CCCCeEEEECCCCCcHH--HHHHH-HHHHHhCCceEEEecCCCCccCCCC--------
Confidence 56778988765432 22356889999866554 34433 4556667999999999996654321
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhc-CCCceeEEEEcCCcchhcccccc---ccCc----
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKF---TIAY---- 615 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~---~~~~---- 615 (734)
.....++++.+.+..+++. .+.+++.++|||+||++++.++++ .|++++++|+..+.......... ....
T Consensus 64 ~~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (271)
T 3ia2_A 64 WTGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFA 141 (271)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHH
Confidence 1223455555555554443 244689999999999877666554 48999999987754321110000 0000
Q ss_pred -----------cccc----c-c----CCCCCHHH----------------HH---HHHhCCccCCCCCCCCCccCCcEEE
Q psy4818 616 -----------YSES----E-F----GSPNNKTH----------------FH---NLLSYSPLHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 616 -----------~~~~----~-~----g~~~~~~~----------------~~---~~~~~sp~~~~~~p~~~~~~P~~Li 656 (734)
.+.. . + +....... +. .+...+....+.. +++| +||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~Lv 216 (271)
T 3ia2_A 142 RFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAK----IDVP-TLV 216 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTT----CCSC-EEE
T ss_pred HHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccC----CCCC-EEE
Confidence 0000 0 0 00001100 00 0111111111222 6777 999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++|++|..||+.++.++.+++. ...++.+++++||.+..... .+..+.+.+||.
T Consensus 217 i~G~~D~~~p~~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 217 IHGDGDQIVPFETTGKVAAELI----------KGAELKVYKDAPHGFAVTHA--QQLNEDLLAFLK 270 (271)
T ss_dssp EEETTCSSSCGGGTHHHHHHHS----------TTCEEEEETTCCTTHHHHTH--HHHHHHHHHHHT
T ss_pred EEeCCCCcCChHHHHHHHHHhC----------CCceEEEEcCCCCcccccCH--HHHHHHHHHHhh
Confidence 9999999999988666655442 23478999999998753322 356666778874
No 128
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.65 E-value=1.8e-15 Score=144.67 Aligned_cols=183 Identities=15% Similarity=0.021 Sum_probs=122.1
Q ss_pred CCcEEEEecCCCCCcC-CccccHHHHHHHHhc-CeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 487 RNPVIIYGYGGYGVSV-LPTFSISRCMFLRHF-NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~~-G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
+.|+||++||+.+... ...|...+...|+++ ||.|+++|+||.+. .++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 4689999999876642 233444355677766 99999999998321 123344455554422
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 644 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 644 (734)
. .+++.++|+|+||++++.++.++| ++++|+.+|............ ..| +..+... +.+. .
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~-~~~---~~~~~~~---~~~~---------~ 125 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERA-SGY---FTRPWQW---EKIK---------A 125 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHH-TST---TSSCCCH---HHHH---------H
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHH-Hhh---hcccccH---HHHH---------h
Confidence 2 378999999999999999999999 799999888764221100000 001 1112211 1111 1
Q ss_pred CCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 645 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 645 p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
.. +|+|+++|++|..||+.++.++++.+ .. ++.+++++||.+.... -+...++++||.+.
T Consensus 126 ----~~-~p~lii~G~~D~~vp~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~~~---p~~~~~~~~fl~~~ 185 (194)
T 2qs9_A 126 ----NC-PYIVQFGSTDDPFLPWKEQQEVADRL-ET-----------KLHKFTDCGHFQNTEF---HELITVVKSLLKVP 185 (194)
T ss_dssp ----HC-SEEEEEEETTCSSSCHHHHHHHHHHH-TC-----------EEEEESSCTTSCSSCC---HHHHHHHHHHHTCC
T ss_pred ----hC-CCEEEEEeCCCCcCCHHHHHHHHHhc-CC-----------eEEEeCCCCCccchhC---HHHHHHHHHHHHhh
Confidence 22 24999999999999999999888887 43 6889999999986543 35566778999876
Q ss_pred cC
Q psy4818 725 LG 726 (734)
Q Consensus 725 l~ 726 (734)
..
T Consensus 186 ~~ 187 (194)
T 2qs9_A 186 AL 187 (194)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 129
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.64 E-value=5.1e-15 Score=156.71 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=136.7
Q ss_pred CCcEEEEecCCCCCcCCc-----------cccHHHH--HHHHhcCeEEEEEeccc--CCCCCchhhhcc--c---cccCC
Q psy4818 487 RNPVIIYGYGGYGVSVLP-----------TFSISRC--MFLRHFNGIYAIPNIRG--GGELGEDWHNAG--R---LLKKQ 546 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~-----------~~~~~~~--~~l~~~G~~v~~~~~rG--~~~~g~~~~~~~--~---~~~~~ 546 (734)
+.|+||++||..+..... .|..... ..|.+.||.|+++|+|| .|..+..-.... . .....
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~ 124 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPF 124 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCC
T ss_pred CCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCc
Confidence 368999999987665421 2332211 12334699999999999 454432100000 0 00113
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcE-EEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc------------c---
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------------K--- 610 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------------~--- 610 (734)
..++++.+.+..+++. +..+++ .|+|||+||.+++.++.++|++++++|+.+|........ .
T Consensus 125 ~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (366)
T 2pl5_A 125 VSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPN 202 (366)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTT
T ss_pred ccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcc
Confidence 4678888877777765 345688 899999999999999999999999999988865421100 0
Q ss_pred -----c------------------c-cC-cccccccC---------------------------CCCCHHH----HHHHH
Q psy4818 611 -----F------------------T-IA-YYSESEFG---------------------------SPNNKTH----FHNLL 634 (734)
Q Consensus 611 -----~------------------~-~~-~~~~~~~g---------------------------~~~~~~~----~~~~~ 634 (734)
+ . .. ..+...+. ....... +..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (366)
T 2pl5_A 203 WKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALD 282 (366)
T ss_dssp CGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHH
T ss_pred cccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhh
Confidence 0 0 00 00000000 0001111 11222
Q ss_pred hCCccC------CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEe-CCCCCCCCCch
Q psy4818 635 SYSPLH------NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE-QDAGHGQGTPL 707 (734)
Q Consensus 635 ~~sp~~------~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~-~~~gH~~~~~~ 707 (734)
.+.... .+.. +++| +||++|++|..||+..+.++++.+... +..++++++ +++||......
T Consensus 283 ~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~gH~~~~e~ 350 (366)
T 2pl5_A 283 HYSLGKGKELTAALSN----ATCR-FLVVSYSSDWLYPPAQSREIVKSLEAA-------DKRVFYVELQSGEGHDSFLLK 350 (366)
T ss_dssp HCBCCSHHHHHHHHTT----CCSE-EEEEEETTCCSSCHHHHHHHHHHHHHT-------TCCEEEEEECCCBSSGGGGSC
T ss_pred hhccccccchhhhhcc----CCCC-EEEEecCCCcccCHHHHHHHHHHhhhc-------ccCeEEEEeCCCCCcchhhcC
Confidence 222111 2232 6677 999999999999999999999999876 556789999 89999875433
Q ss_pred HHhHHHHHHHHHHHHH
Q psy4818 708 MKSIEEMTDIYVFLMK 723 (734)
Q Consensus 708 ~~~~~~~~~~~~fl~~ 723 (734)
. .+....+.+||.+
T Consensus 351 p--~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 351 N--PKQIEILKGFLEN 364 (366)
T ss_dssp C--HHHHHHHHHHHHC
T ss_pred h--hHHHHHHHHHHcc
Confidence 3 3566667888864
No 130
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.63 E-value=3.5e-13 Score=143.89 Aligned_cols=322 Identities=13% Similarity=0.100 Sum_probs=191.9
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
.++|.++|...... ..+++.+..++.....+... ..+..++|||||++|+++.... ..|++||+.
T Consensus 40 s~dg~~l~~~~~~d----~~i~v~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~~~----~~v~v~d~~ 104 (391)
T 1l0q_A 40 SPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAG-------SSPQGVAVSPDGKQVYVTNMAS----STLSVIDTT 104 (391)
T ss_dssp CTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEETTT----TEEEEEETT
T ss_pred CCCCCEEEEECCCC----CeEEEEECCCCeEEEEEECC-------CCccceEECCCCCEEEEEECCC----CEEEEEECC
Confidence 35677776654322 23555554444433333322 1477899999999998876433 369999999
Q ss_pred CCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEE
Q psy4818 177 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 256 (734)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 256 (734)
+++.+...........++|+|||+.|+++... ...|+++++.++.. +..+... . ....+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------------~~~v~~~d~~~~~~--~~~~~~~--~-~~~~~~ 164 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG---------------DKTVSVINTVTKAV--INTVSVG--R-SPKGIA 164 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETT---------------TTEEEEEETTTTEE--EEEEECC--S-SEEEEE
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCC---------------CCEEEEEECCCCcE--EEEEecC--C-CcceEE
Confidence 99865433333344689999999999887632 23799999887642 2222222 1 236789
Q ss_pred EecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 257 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 257 ~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
|+|||++|++.... ...|++||+.++. ....+........ .|+|+|+.+++.+.. ..+..|+.+|+
T Consensus 165 ~~~dg~~l~~~~~~---~~~v~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~ 231 (391)
T 1l0q_A 165 VTPDGTKVYVANFD---SMSISVIDTVTNS---------VIDTVKVEAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDT 231 (391)
T ss_dssp ECTTSSEEEEEETT---TTEEEEEETTTTE---------EEEEEECSSEEEEEEECTTSSEEEEEEEC-SSCCEEEEEET
T ss_pred ECCCCCEEEEEeCC---CCEEEEEECCCCe---------EEEEEecCCCccceEECCCCCEEEEEecC-cCCCcEEEEEC
Confidence 99999999765432 2679999998731 1222222222222 389999988877642 23467999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCce------E---------
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQ------I--------- 399 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~------v--------- 399 (734)
.++. ....++.. .. +..+.+. +++.+++....+ ..|++||+.+++.+..+...... +
T Consensus 232 ~~~~---~~~~~~~~-~~-~~~~~~s~dg~~l~~s~~~d--~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
T 1l0q_A 232 GTNK---ITARIPVG-PD-PAGIAVTPDGKKVYVALSFX--NTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVY 304 (391)
T ss_dssp TTTE---EEEEEECC-SS-EEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCC
T ss_pred CCCe---EEEEEecC-CC-ccEEEEccCCCEEEEEcCCC--CEEEEEECCCCcEEEEEECCcCCCccceeeecccccccc
Confidence 8764 23344433 22 3444444 334566665444 57999999888876666432111 1
Q ss_pred --EeeccCcccceEE----EEEecCCCCceEEEEeCCCCcCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCC--cE
Q psy4818 400 --THISGRRKYNEVF----YGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDG--TR 471 (734)
Q Consensus 400 --~~~~~~~d~~~l~----~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~ 471 (734)
..++.+....... +.+.+.......+.+|+ .++ ....... ....|.+.+.-...+++++.+| .+
T Consensus 305 ~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~-----~~g--~~~~~~~-~~~~~~~~g~y~~~~~~~~~~g~~~~ 376 (391)
T 1l0q_A 305 PSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF-----GDG--SSSKKQN-PTHTYSETGIYTVRLTVSNSNGTDSQ 376 (391)
T ss_dssp CBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEEC-----SSS--CEECSSS-CEECCSSCEEEEEEEEEEETTEEEEE
T ss_pred cccccccccccccccccceEEEEeCCCCceEEEEEC-----CCC--cccCcCC-CeEEeCCCceEEEEEEEECCCCcEEE
Confidence 0111111111100 22334445667889998 455 2221111 1124666666677888888999 57
Q ss_pred EeEEEEEecc
Q psy4818 472 VPMYIIHRVG 481 (734)
Q Consensus 472 i~~~~~~p~~ 481 (734)
++...+++++
T Consensus 377 ~~~~~v~~~~ 386 (391)
T 1l0q_A 377 ISTVNVVLKG 386 (391)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEcCC
Confidence 8888888764
No 131
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.63 E-value=4.1e-14 Score=143.18 Aligned_cols=223 Identities=15% Similarity=0.086 Sum_probs=130.4
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+++.||.++..... +..|.||++||..+... .|... ...|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~--------g~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~-------- 63 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW--------GQGRPVVFIHGWPLNGD--AWQDQ-LKAVVDAGYRGIAHDRRGHGHSTPV-------- 63 (274)
T ss_dssp EECTTSCEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EEccCCCEEEEEec--------CCCceEEEECCCcchHH--HHHHH-HHHHHhCCCeEEEEcCCCCCCCCCC--------
Confidence 45678877754322 23467999999765543 34433 3556667999999999996654311
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhcccc---ccccCc----
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFN---KFTIAY---- 615 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~---~~~~~~---- 615 (734)
.....++++.+.+..+++. ++.+++.++|||+||.+++.++.++ |++++++|+..+........ ......
T Consensus 64 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (274)
T 1a8q_A 64 WDGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFD 141 (274)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHH
Confidence 1224556666555555554 3446799999999999998877665 99999999887642110000 000000
Q ss_pred -----------ccc-----cccCC-----CCCHHHHHH-------------------HHhCCccCCCCCCCCCccCCcEE
Q psy4818 616 -----------YSE-----SEFGS-----PNNKTHFHN-------------------LLSYSPLHNIKVPPNNTQYPATL 655 (734)
Q Consensus 616 -----------~~~-----~~~g~-----~~~~~~~~~-------------------~~~~sp~~~~~~p~~~~~~P~~L 655 (734)
.+. ..++. ....+.... +........+.. +++| +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~l 216 (274)
T 1a8q_A 142 ALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKK----FDIP-TL 216 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTT----CCSC-EE
T ss_pred HHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhc----CCCC-EE
Confidence 000 00110 011111111 111111112233 6777 99
Q ss_pred EEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 656 VLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 656 i~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+++|++|..+|+.+..+..+++ -...++++++++||.......+..+..+.+.+||.
T Consensus 217 ii~G~~D~~~~~~~~~~~~~~~----------~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 217 VVHGDDDQVVPIDATGRKSAQI----------IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH----------STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred EEecCcCCCCCcHHHHHHHHhh----------CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 9999999999988655444332 12357889999999886541122456667788874
No 132
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.63 E-value=1.3e-15 Score=157.60 Aligned_cols=214 Identities=12% Similarity=0.037 Sum_probs=133.6
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|..+..... ++.|+||++||+.+... .|. .+...|++ ||.|+++|+||.|... ......
T Consensus 56 ~~~~~~~~~~--------g~~p~vv~lhG~~~~~~--~~~-~~~~~L~~-~~~v~~~D~~G~G~S~--------~~~~~~ 115 (314)
T 3kxp_A 56 GRITLNVREK--------GSGPLMLFFHGITSNSA--VFE-PLMIRLSD-RFTTIAVDQRGHGLSD--------KPETGY 115 (314)
T ss_dssp SSCEEEEEEE--------CCSSEEEEECCTTCCGG--GGH-HHHHTTTT-TSEEEEECCTTSTTSC--------CCSSCC
T ss_pred CCEEEEEEec--------CCCCEEEEECCCCCCHH--HHH-HHHHHHHc-CCeEEEEeCCCcCCCC--------CCCCCC
Confidence 6666655432 23689999999865543 343 34566776 8999999999965432 122345
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc------cccCcc-----
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK------FTIAYY----- 616 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~------~~~~~~----- 616 (734)
.++++.+.+..+++. .+.++++++|+|+||++++.++.++|+.++++|+.+|...+..... ......
T Consensus 116 ~~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (314)
T 3kxp_A 116 EANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDI 193 (314)
T ss_dssp SHHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSH
T ss_pred CHHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCH
Confidence 677777777766655 2346899999999999999999999999999999887543221100 000000
Q ss_pred ------cccccCCCCCHHHHHHHHhC---------------------------CccCCCCCCCCCccCCcEEEEecCCCC
Q psy4818 617 ------SESEFGSPNNKTHFHNLLSY---------------------------SPLHNIKVPPNNTQYPATLVLTGDHDD 663 (734)
Q Consensus 617 ------~~~~~g~~~~~~~~~~~~~~---------------------------sp~~~~~~p~~~~~~P~~Li~~g~~D~ 663 (734)
+...+.. ...+....+... +....+.. +++| +|+++|++|.
T Consensus 194 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~Lii~G~~D~ 267 (314)
T 3kxp_A 194 KAVEAYLAGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRD----VTKP-VLIVRGESSK 267 (314)
T ss_dssp HHHHHHHHHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHH----CCSC-EEEEEETTCS
T ss_pred HHHHHHHHhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhc----CCCC-EEEEecCCCc
Confidence 0000000 011111110000 11112222 5677 9999999999
Q ss_pred CCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 664 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 664 ~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
.+++..+.++++.+.. +++++++++||.+..... .+....+.+||.
T Consensus 268 ~~~~~~~~~~~~~~~~-----------~~~~~~~g~gH~~~~e~~--~~~~~~i~~fl~ 313 (314)
T 3kxp_A 268 LVSAAALAKTSRLRPD-----------LPVVVVPGADHYVNEVSP--EITLKAITNFID 313 (314)
T ss_dssp SSCHHHHHHHHHHCTT-----------SCEEEETTCCSCHHHHCH--HHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhCCC-----------ceEEEcCCCCCcchhhCH--HHHHHHHHHHHh
Confidence 9999888887776643 367889999998743222 355666778875
No 133
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.63 E-value=1.9e-14 Score=145.59 Aligned_cols=221 Identities=19% Similarity=0.178 Sum_probs=129.0
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+++.||.++..... +..|.||++||..+... .|.. ....|+++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~--------g~~~~vvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~G~G~S~~~-------- 63 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNAD--SWES-QMIFLAAQGYRVIAHDRRGHGRSSQP-------- 63 (273)
T ss_dssp EECTTSCEEEEEEE--------SCSSEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EecCCCcEEEEEEc--------CCCCEEEEECCCCCcHH--HHhh-HHhhHhhCCcEEEEECCCCCCCCCCC--------
Confidence 56678877754322 23478999999865543 3444 34566667999999999996644311
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhcccc---ccccCc----
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFN---KFTIAY---- 615 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~---~~~~~~---- 615 (734)
....+++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+........ ......
T Consensus 64 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (273)
T 1a8s_A 64 WSGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFD 141 (273)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHH
Confidence 1234566666655555554 3456899999999999998876665 99999998877532110000 000000
Q ss_pred -----------ccc------cccCC-----CCCHHHHH----------------HH---HhCCccCCCCCCCCCccCCcE
Q psy4818 616 -----------YSE------SEFGS-----PNNKTHFH----------------NL---LSYSPLHNIKVPPNNTQYPAT 654 (734)
Q Consensus 616 -----------~~~------~~~g~-----~~~~~~~~----------------~~---~~~sp~~~~~~p~~~~~~P~~ 654 (734)
.+. ..++. ....+..+ .+ ........+.. +++| +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~ 216 (273)
T 1a8s_A 142 GIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKK----IDVP-T 216 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHT----CCSC-E
T ss_pred HHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhc----CCCC-E
Confidence 000 00110 01111111 01 11111112222 6677 9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 655 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 655 Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
||++|++|..+|+.+..+..+++. ...++++++++||...... ..+..+.+.+||.
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~e~--p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAALV----------KGSTLKIYSGAPHGLTDTH--KDQLNADLLAFIK 272 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHS----------TTCEEEEETTCCSCHHHHT--HHHHHHHHHHHHH
T ss_pred EEEECCCCccCChHHHHHHHHHhC----------CCcEEEEeCCCCCcchhhC--HHHHHHHHHHHHh
Confidence 999999999999986554443331 1347889999999874322 2355666788875
No 134
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.63 E-value=5.5e-15 Score=140.98 Aligned_cols=183 Identities=14% Similarity=0.055 Sum_probs=121.3
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||..+.... .|...+...|+++||.|+++|+|.++. .+++++.+.+..+++.-
T Consensus 3 g~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~--- 63 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL--- 63 (192)
T ss_dssp -CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---
T ss_pred CCCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---
Confidence 35889999997665431 344444455766799999999993211 13566666666555442
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCC--ceeEEEEcCCcchhccccccccCccccccc-CCCCCHHHHHHHHhCCccCCCC
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPE--LYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIK 643 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~ 643 (734)
.+++.++|+|+||++++.++.++|+ .++++|+.+|+......... ...| ..+.+. ..+ .
T Consensus 64 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~---------~ 125 (192)
T 1uxo_A 64 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM------LDEFTQGSFDH---QKI---------I 125 (192)
T ss_dssp CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG------GGGGTCSCCCH---HHH---------H
T ss_pred cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchh------hhhhhhcCCCH---HHH---------H
Confidence 5789999999999999999999999 99999999987653321110 0111 112111 111 1
Q ss_pred CCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 644 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 644 ~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
. +..| +|+++|++|..||+.++.++++.+ .. ++++++++||.+..... +.+..+.+||.+
T Consensus 126 ~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~~~~---~~~~~~~~~l~~ 185 (192)
T 1uxo_A 126 E----SAKH-RAVIASKDDQIVPFSFSKDLAQQI-DA-----------ALYEVQHGGHFLEDEGF---TSLPIVYDVLTS 185 (192)
T ss_dssp H----HEEE-EEEEEETTCSSSCHHHHHHHHHHT-TC-----------EEEEETTCTTSCGGGTC---SCCHHHHHHHHH
T ss_pred h----hcCC-EEEEecCCCCcCCHHHHHHHHHhc-Cc-----------eEEEeCCCcCccccccc---ccHHHHHHHHHH
Confidence 1 3445 999999999999999888877766 33 68899999998854322 112235666666
Q ss_pred HcC
Q psy4818 724 SLG 726 (734)
Q Consensus 724 ~l~ 726 (734)
.|.
T Consensus 186 ~l~ 188 (192)
T 1uxo_A 186 YFS 188 (192)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 135
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.62 E-value=4.2e-15 Score=149.00 Aligned_cols=211 Identities=14% Similarity=0.070 Sum_probs=133.7
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+...||.++.....- +.|+||++||+.+.... |. .+...|+ +||.|+++|+||.|.....
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~-~~~~~l~-~~~~vi~~d~~G~G~S~~~-------- 66 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALSTRAG--GA-PLAERLA-PHFTVICYDRRGRGDSGDT-------- 66 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCCGGG--GH-HHHHHHT-TTSEEEEECCTTSTTCCCC--------
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcChHH--HH-HHHHHHh-cCcEEEEEecCCCcCCCCC--------
Confidence 556788887755432 25789999998665533 33 3456676 6999999999996644311
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccC---------
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA--------- 614 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~--------- 614 (734)
...+++++.+.+..+++. .+ +++.++|+|+||.+++.++.++| .++++|+..|.............
T Consensus 67 -~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (262)
T 3r0v_A 67 -PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDAL 141 (262)
T ss_dssp -SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHH
Confidence 134577777766666665 23 68999999999999999999999 99999998886543221100000
Q ss_pred ----------cccccc-cCCCCCHHHHHHHHhC------------------------CccCCCCCCCCCccCCcEEEEec
Q psy4818 615 ----------YYSESE-FGSPNNKTHFHNLLSY------------------------SPLHNIKVPPNNTQYPATLVLTG 659 (734)
Q Consensus 615 ----------~~~~~~-~g~~~~~~~~~~~~~~------------------------sp~~~~~~p~~~~~~P~~Li~~g 659 (734)
..+... .+.+ ++..+.+... .+...+.. +++| +|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G 214 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP--PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFAS----ISIP-TLVMDG 214 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC--HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTT----CCSC-EEEEEC
T ss_pred hhccchhhHHHHHhhcccCCC--HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCc----CCCC-EEEEee
Confidence 000001 1111 1111111110 11122222 6677 999999
Q ss_pred CCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 660 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 660 ~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++|..+++..+.++.+.+. .+++++++++||. .. ..+....+.+||.
T Consensus 215 ~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~-~~----p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 215 GASPAWIRHTAQELADTIP-----------NARYVTLENQTHT-VA----PDAIAPVLVEFFT 261 (262)
T ss_dssp TTCCHHHHHHHHHHHHHST-----------TEEEEECCCSSSS-CC----HHHHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHHHhCC-----------CCeEEEecCCCcc-cC----HHHHHHHHHHHHh
Confidence 9999999888777776553 2478999999993 22 2355666778874
No 136
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.62 E-value=7e-15 Score=147.04 Aligned_cols=208 Identities=7% Similarity=-0.017 Sum_probs=129.4
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 568 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 568 (734)
|+||++||..+.... |.. ....|+++||.|+++|+||.|..... .....+++++.+.+..++++-.. .+
T Consensus 5 ~~vv~lHG~~~~~~~--~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l~~-~~ 73 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWI--WYK-LKPLLESAGHRVTAVELAASGIDPRP-------IQAVETVDEYSKPLIETLKSLPE-NE 73 (258)
T ss_dssp CEEEEECCTTCCGGG--GTT-HHHHHHHTTCEEEEECCTTSTTCSSC-------GGGCCSHHHHHHHHHHHHHTSCT-TC
T ss_pred CcEEEECCCCCcccc--HHH-HHHHHHhCCCEEEEecCCCCcCCCCC-------CCccccHHHhHHHHHHHHHHhcc-cC
Confidence 899999998765543 443 34667777999999999996643311 11224567777666666655322 26
Q ss_pred cEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc------c-cCccccc----------------------
Q psy4818 569 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF------T-IAYYSES---------------------- 619 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------~-~~~~~~~---------------------- 619 (734)
++.++|||+||++++.++.++|++++++|+.+|.......... . ....|..
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 8999999999999999999999999999988875422111000 0 0000000
Q ss_pred ---ccCCCCCHHHHHHHHh-C-------------CccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 620 ---EFGSPNNKTHFHNLLS-Y-------------SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 620 ---~~g~~~~~~~~~~~~~-~-------------sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
.+......+....+.. . .+...... .++| +|+++|++|..+|+..+.++.+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~-- 226 (258)
T 3dqz_A 154 MKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGY----GSVQ-RVYVMSSEDKAIPCDFIRWMIDNFNVS-- 226 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTG----GGSC-EEEEEETTCSSSCHHHHHHHHHHSCCS--
T ss_pred HHHHhhccCCHHHHHHHHHhccCCchhhhhhhcccccccccc----ccCC-EEEEECCCCeeeCHHHHHHHHHhCCcc--
Confidence 0001111111111111 1 11111111 3466 999999999999998887777665322
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
++++++++||....... .+..+.+.+|+.++|
T Consensus 227 ---------~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 227 ---------KVYEIDGGDHMVMLSKP--QKLFDSLSAIATDYM 258 (258)
T ss_dssp ---------CEEEETTCCSCHHHHSH--HHHHHHHHHHHHHTC
T ss_pred ---------cEEEcCCCCCchhhcCh--HHHHHHHHHHHHHhC
Confidence 67889999998654322 356666888988764
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.62 E-value=3.4e-13 Score=163.07 Aligned_cols=101 Identities=12% Similarity=0.109 Sum_probs=73.8
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC-CCceEEEE
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-GSDWNTLH 171 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~-g~~~~~l~ 171 (734)
...|...|++++|... ..||+.+..+++.+.|+... ..+..++|||||++|||+.... .....+||
T Consensus 17 ~~~~~~S~~~iaf~~~------~~l~~~~~~gg~~~~lt~~~-------~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~ 83 (1045)
T 1k32_A 17 LLNPDIHGDRIIFVCC------DDLWEHDLKSGSTRKIVSNL-------GVINNARFFPDGRKIAIRVMRGSSLNTADLY 83 (1045)
T ss_dssp CEEEEEETTEEEEEET------TEEEEEETTTCCEEEEECSS-------SEEEEEEECTTSSEEEEEEEESTTCCEEEEE
T ss_pred EeCcEEeCCEEEEEEC------CcEEEEECCCCcEEEeeeCC-------CcccCeEECCCCCEEEEEEeeccCCCCCeEE
Confidence 4445555889999875 25888887778877776532 3578999999999999998751 11337899
Q ss_pred EEECCCCCccccccccccc-------CeeEEEcCCcEEEEEEE
Q psy4818 172 IKDVDTGKDYPEVLKNVKF-------PSISWTHDHKGFFYNQY 207 (734)
Q Consensus 172 v~dl~~g~~~~~~~~~~~~-------~~~~wSpDg~~l~y~~~ 207 (734)
+||+++|+..+.+...... ..++|||||+ |+|+..
T Consensus 84 ~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~ 125 (1045)
T 1k32_A 84 FYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTD 125 (1045)
T ss_dssp EEETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEEC
T ss_pred EEECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEEC
Confidence 9999999854444333333 5799999999 877765
No 138
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.62 E-value=2.7e-15 Score=150.92 Aligned_cols=209 Identities=10% Similarity=0.051 Sum_probs=129.1
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
...|+||++||..+.... |.. +...|.++||.|+++|+||.|..... ......++++.+.+..+++.- .
T Consensus 10 ~~~~~vvllHG~~~~~~~--~~~-~~~~l~~~g~~v~~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWC--WYK-IVALMRSSGHNVTALDLGASGINPKQ-------ALQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp CCCCEEEEECCTTCCGGG--GHH-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCeEEEECCCCCCcch--HHH-HHHHHHhcCCeEEEeccccCCCCCCc-------CCccCCHHHHHHHHHHHHHhc-C
Confidence 457899999998765543 443 44667767999999999996544321 111245677777666666552 1
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc------cc-ccCcccc--------------------
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------KF-TIAYYSE-------------------- 618 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------~~-~~~~~~~-------------------- 618 (734)
+.+++.|+|||+||.+++.++.++|++++++|+.++........ .. .....|.
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 45789999999999999999999999999999887754211100 00 0000000
Q ss_pred -----cccCCCCCHHHHHHHH---------------hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHH
Q psy4818 619 -----SEFGSPNNKTHFHNLL---------------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQ 678 (734)
Q Consensus 619 -----~~~g~~~~~~~~~~~~---------------~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~ 678 (734)
..+......+....+. ...++..... .+.| +|+++|++|..+++....++.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~ 233 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRY----GSVK-RVFIVATENDALKKEFLKLMIEKNP 233 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTG----GGSC-EEEEECCCSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccc----cCCC-EEEEEeCCCCccCHHHHHHHHHhCC
Confidence 0000111111111111 1112222211 2466 9999999999998888777766553
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 679 EKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
. +++++++++||....... .+....+.+|+.+
T Consensus 234 ~-----------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 265 (267)
T 3sty_A 234 P-----------DEVKEIEGSDHVTMMSKP--QQLFTTLLSIANK 265 (267)
T ss_dssp C-----------SEEEECTTCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred C-----------ceEEEeCCCCccccccCh--HHHHHHHHHHHHh
Confidence 2 478999999998643322 3556667788875
No 139
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.62 E-value=2.1e-15 Score=152.48 Aligned_cols=209 Identities=15% Similarity=0.077 Sum_probs=132.3
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|+||++||..+... .|... ...|++ +|.|+++|+||.|.... ......+++++.+.+..+++.-
T Consensus 13 ~~~~~vvllHG~~~~~~--~w~~~-~~~L~~-~~~vi~~Dl~G~G~S~~-------~~~~~~~~~~~a~dl~~~l~~l-- 79 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGS--YWLPQ-LAVLEQ-EYQVVCYDQRGTGNNPD-------TLAEDYSIAQMAAELHQALVAA-- 79 (268)
T ss_dssp TTCCEEEEECCTTCCGG--GGHHH-HHHHHT-TSEEEECCCTTBTTBCC-------CCCTTCCHHHHHHHHHHHHHHT--
T ss_pred CCCCEEEEeCCCCccHH--HHHHH-HHHHhh-cCeEEEECCCCCCCCCC-------CccccCCHHHHHHHHHHHHHHc--
Confidence 35688999999766543 34443 456765 89999999999553321 1112346778777777776652
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc------------------------cccCccccccc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK------------------------FTIAYYSESEF 621 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~------------------------~~~~~~~~~~~ 621 (734)
..+++.++|||+||.+++.++.++|++++++|+..+......... ......|....
T Consensus 80 ~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3v48_A 80 GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAAR 159 (268)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcc
Confidence 345799999999999999999999999999998876432110000 00000010000
Q ss_pred -------------CCCCCH---HHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCC
Q psy4818 622 -------------GSPNNK---THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 622 -------------g~~~~~---~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~ 685 (734)
..+... ..+..+...+....+.. +++| +||++|++|..+|+..+.++.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~l~~~~p~------ 228 (268)
T 3v48_A 160 APRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADR----IRCP-VQIICASDDLLVPTACSSELHAALPD------ 228 (268)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHCSS------
T ss_pred cccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhc----CCCC-eEEEEeCCCcccCHHHHHHHHHhCCc------
Confidence 000000 01111222222233333 7788 99999999999999988877776543
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 686 YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.++.+++++||....... .+..+.+.+||...+
T Consensus 229 -----~~~~~~~~~GH~~~~e~p--~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 229 -----SQKMVMPYGGHACNVTDP--ETFNALLLNGLASLL 261 (268)
T ss_dssp -----EEEEEESSCCTTHHHHCH--HHHHHHHHHHHHHHH
T ss_pred -----CeEEEeCCCCcchhhcCH--HHHHHHHHHHHHHhc
Confidence 478889999997643332 356667888988754
No 140
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.62 E-value=2.2e-15 Score=160.08 Aligned_cols=251 Identities=14% Similarity=0.118 Sum_probs=146.8
Q ss_pred EEEEEEcCCCcEEeEEEEEecc-ccCCCCCcEEEEecCCCCCcCC----------cc-ccHHH--HHHHHhcCeEEEEEe
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVG-ALRNRRNPVIIYGYGGYGVSVL----------PT-FSISR--CMFLRHFNGIYAIPN 525 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~-~~~~~~~P~vv~~hGg~~~~~~----------~~-~~~~~--~~~l~~~G~~v~~~~ 525 (734)
+.-.++..+|..+...|.+..- .....+.|+||++||..+.... .. |.... ...|..+||.|+++|
T Consensus 13 ~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D 92 (377)
T 3i1i_A 13 ILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTD 92 (377)
T ss_dssp EEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEEC
T ss_pred eecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEec
Confidence 3445666788777334433221 1112346899999998776543 11 22111 123445699999999
Q ss_pred cccCCC--------CCchhhhc--cc---cccCCCchhHHHHHHHHHHHcCCCCCCcEE-EEEcChHHHHHHHHHhcCCC
Q psy4818 526 IRGGGE--------LGEDWHNA--GR---LLKKQNCFDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPE 591 (734)
Q Consensus 526 ~rG~~~--------~g~~~~~~--~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~p~ 591 (734)
+||.|. .|..-... +. .......++|+.+.+..+++. ...+++. |+|||+||.+++.++.++|+
T Consensus 93 ~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~ 170 (377)
T 3i1i_A 93 NLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPH 170 (377)
T ss_dssp CTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTT
T ss_pred ccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChH
Confidence 997642 11110000 00 011244778888888887765 3445775 99999999999999999999
Q ss_pred ceeEEEE-cCCcchhcc--------------ccc-c------------------------ccC-cccccccCC-------
Q psy4818 592 LYGAALI-LVGALDMLR--------------FNK-F------------------------TIA-YYSESEFGS------- 623 (734)
Q Consensus 592 ~~~a~v~-~~~~~d~~~--------------~~~-~------------------------~~~-~~~~~~~g~------- 623 (734)
+++++|+ ..+...... ... . ... ..+...++.
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T 3i1i_A 171 MVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEP 250 (377)
T ss_dssp TBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGG
T ss_pred HHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccc
Confidence 9999998 554332000 000 0 000 000000111
Q ss_pred -----------------------CCCHHHH----HHHHhCCc-------cCCCCCCCCCccCCcEEEEecCCCCCCCChH
Q psy4818 624 -----------------------PNNKTHF----HNLLSYSP-------LHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 669 (734)
Q Consensus 624 -----------------------~~~~~~~----~~~~~~sp-------~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~ 669 (734)
......+ ..+..+.+ ...+.. +++| +||++|++|..+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vlii~G~~D~~~~~~~ 325 (377)
T 3i1i_A 251 YEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSN----VEAN-VLMIPCKQDLLQPSRY 325 (377)
T ss_dssp GTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHT----CCSE-EEEECBTTCSSSCTHH
T ss_pred cccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhh----CCCC-EEEEecCCccccCHHH
Confidence 0000000 00111111 011122 6677 9999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCC-CCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 670 SYKFIATLQEKIGSLPYQKNPLLLRVEQD-AGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 670 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
+.++++.+++. +..++++++++ +||....... .+....+.+||.+++.
T Consensus 326 ~~~~~~~~~~~-------g~~~~~~~i~~~~gH~~~~e~p--~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 326 NYKMVDLLQKQ-------GKYAEVYEIESINGHMAGVFDI--HLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHHHHHHHT-------TCCEEECCBCCTTGGGHHHHCG--GGTHHHHHHHHHSCCS
T ss_pred HHHHHHHHHhc-------CCCceEEEcCCCCCCcchhcCH--HHHHHHHHHHHHhhhh
Confidence 99999999876 66789999998 9997543222 3456668899987654
No 141
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.62 E-value=3e-14 Score=144.29 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=129.4
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+++.||.++.....-|+ ..|.||++||..+... .|.. ....|+++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~-~~~~l~~~g~~vi~~D~~G~G~S~~~-------- 65 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPR------DGLPVVFHHGWPLSAD--DWDN-QMLFFLSHGYRVIAHDRRGHGRSDQP-------- 65 (275)
T ss_dssp EECTTSCEEEEEEESCT------TSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EEccCCCEEEEEEcCCC------CCceEEEECCCCCchh--hHHH-HHHHHHHCCceEEEEcCCcCCCCCCC--------
Confidence 45678887765444221 3478999999765543 3444 34566667999999999996654311
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhcccc---ccccCc----
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFN---KFTIAY---- 615 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~---~~~~~~---- 615 (734)
.....++++.+.+..+++. ++.+++.++|||+||.+++.++.++ |++++++|+..+........ ......
T Consensus 66 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 1a88_A 66 STGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFD 143 (275)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHH
Confidence 1223455555555444443 2345799999999999998877665 99999999877542111000 000000
Q ss_pred -----------ccc------cccCC-----CCCHHHHHH----------------H---HhCCccCCCCCCCCCccCCcE
Q psy4818 616 -----------YSE------SEFGS-----PNNKTHFHN----------------L---LSYSPLHNIKVPPNNTQYPAT 654 (734)
Q Consensus 616 -----------~~~------~~~g~-----~~~~~~~~~----------------~---~~~sp~~~~~~p~~~~~~P~~ 654 (734)
.+. ..++. ....+..+. + ........+.. +++| +
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~ 218 (275)
T 1a88_A 144 EFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKR----IDVP-V 218 (275)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHH----CCSC-E
T ss_pred HHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhccccccccc----CCCC-E
Confidence 000 00110 011111111 0 01111111222 6677 9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 655 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 655 Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
||++|++|..+|+.+..++.+++ -..+++++++++||...... ..+..+.+.+||.
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~----------~~~~~~~~~~~~gH~~~~e~--p~~~~~~i~~fl~ 274 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAEL----------LANATLKSYEGLPHGMLSTH--PEVLNPDLLAFVK 274 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH----------STTEEEEEETTCCTTHHHHC--HHHHHHHHHHHHH
T ss_pred EEEecCCCccCCcHHHHHHHHhh----------CCCcEEEEcCCCCccHHHhC--HHHHHHHHHHHhh
Confidence 99999999999988654443332 22468899999999864322 2355666788875
No 142
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1e-14 Score=148.03 Aligned_cols=203 Identities=16% Similarity=0.109 Sum_probs=123.1
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 568 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 568 (734)
|.||++||..+... .|.. ....|+++||.|+++|+||.|..... ....+++++.+.+..+++. .+.+
T Consensus 24 ~pvvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~a~dl~~~l~~--l~~~ 90 (277)
T 1brt_A 24 QPVVLIHGFPLSGH--SWER-QSAALLDAGYRVITYDRRGFGQSSQP--------TTGYDYDTFAADLNTVLET--LDLQ 90 (277)
T ss_dssp SEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHH--HTCC
T ss_pred CeEEEECCCCCcHH--HHHH-HHHHHhhCCCEEEEeCCCCCCCCCCC--------CCCccHHHHHHHHHHHHHH--hCCC
Confidence 45899999876543 3443 34667667999999999996643311 1234555655555555443 2346
Q ss_pred cEEEEEcChHHHHHHHHHhcCCC-ceeEEEEcCCcchhccc-cccccC------------------cccc----cc-cC-
Q psy4818 569 YITIMGGSNGGLLVGACLNQRPE-LYGAALILVGALDMLRF-NKFTIA------------------YYSE----SE-FG- 622 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~d~~~~-~~~~~~------------------~~~~----~~-~g- 622 (734)
++.++|||+||.+++.++.++|+ +++++|+.+|....... .....+ ..+. .. ++
T Consensus 91 ~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (277)
T 1brt_A 91 DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNL 170 (277)
T ss_dssp SEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTH
T ss_pred ceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhc
Confidence 89999999999999999999999 99999988764321100 000000 0000 00 11
Q ss_pred -----CCCCHHHHHHH----------------HhC--CccCCCCCCCCCccCCcEEEEecCCCCCCCChHH-HHHHHHHH
Q psy4818 623 -----SPNNKTHFHNL----------------LSY--SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQ 678 (734)
Q Consensus 623 -----~~~~~~~~~~~----------------~~~--sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~-~~~~~~L~ 678 (734)
....++..+.+ ... .....+.. ++.| +||++|++|..+|+..+ .++.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~ 245 (277)
T 1brt_A 171 DENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPR----IDVP-ALILHGTGDRTLPIENTARVFHKALP 245 (277)
T ss_dssp HHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGG----CCSC-EEEEEETTCSSSCGGGTHHHHHHHCT
T ss_pred cccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhccc----CCCC-eEEEecCCCccCChHHHHHHHHHHCC
Confidence 11112211111 011 11112232 6777 99999999999999887 66666554
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 679 EKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
. .++++++++||...... ..+..+.+.+||.
T Consensus 246 ~-----------~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~ 276 (277)
T 1brt_A 246 S-----------AEYVEVEGAPHGLLWTH--AEEVNTALLAFLA 276 (277)
T ss_dssp T-----------SEEEEETTCCTTHHHHT--HHHHHHHHHHHHH
T ss_pred C-----------CcEEEeCCCCcchhhhC--HHHHHHHHHHHHh
Confidence 3 37888999999864322 2355666778875
No 143
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.61 E-value=8.9e-15 Score=149.32 Aligned_cols=224 Identities=14% Similarity=0.089 Sum_probs=135.6
Q ss_pred EEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccc
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 542 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~ 542 (734)
.+...+|.++.....-|+ ..|.||++||.++.... .|.. ....|+ .||.|+++|+||.|..... ..
T Consensus 6 ~~~~~~g~~l~~~~~G~~------~~~~vvllHG~~~~~~~-~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~--~~--- 71 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGPV------EGPALFVLHGGPGGNAY-VLRE-GLQDYL-EGFRVVYFDQRGSGRSLEL--PQ--- 71 (286)
T ss_dssp EEEECSSCEEEEEEESCT------TSCEEEEECCTTTCCSH-HHHH-HHGGGC-TTSEEEEECCTTSTTSCCC--CS---
T ss_pred eEEeECCEEEEEEeecCC------CCCEEEEECCCCCcchh-HHHH-HHHHhc-CCCEEEEECCCCCCCCCCC--cc---
Confidence 344467877766554331 34789999998765541 2433 345565 4999999999996643310 00
Q ss_pred ccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-cc----------
Q psy4818 543 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-KF---------- 611 (734)
Q Consensus 543 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-~~---------- 611 (734)
.....+++++.+.+..+++. +..+++.++|||+||.+++.++.++|+ ++++|+..|..++.... ..
T Consensus 72 ~~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (286)
T 2yys_A 72 DPRLFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLP 148 (286)
T ss_dssp CGGGCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCS
T ss_pred CcccCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccch
Confidence 00134566776666666655 234689999999999999999999999 99999988864221100 00
Q ss_pred ----ccCc--------ccccc--cCCC-------------------CCHHHH--HHHHhCCccCCCCCCCCCccCCcEEE
Q psy4818 612 ----TIAY--------YSESE--FGSP-------------------NNKTHF--HNLLSYSPLHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 612 ----~~~~--------~~~~~--~g~~-------------------~~~~~~--~~~~~~sp~~~~~~p~~~~~~P~~Li 656 (734)
.... .+... +..+ .....+ ..+..+.....+.. +++| +||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lv 223 (286)
T 2yys_A 149 DPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTP----ERRP-LYV 223 (286)
T ss_dssp CHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCC----CSSC-EEE
T ss_pred hHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhh----cCCC-EEE
Confidence 0000 00000 0000 000000 00011111112332 7778 999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
++|++|..+++. +.++.+ +... ++++++++||....... .+..+.+.+||.+
T Consensus 224 i~G~~D~~~~~~-~~~~~~-~~~~-----------~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 275 (286)
T 2yys_A 224 LVGERDGTSYPY-AEEVAS-RLRA-----------PIRVLPEAGHYLWIDAP--EAFEEAFKEALAA 275 (286)
T ss_dssp EEETTCTTTTTT-HHHHHH-HHTC-----------CEEEETTCCSSHHHHCH--HHHHHHHHHHHHT
T ss_pred EEeCCCCcCCHh-HHHHHh-CCCC-----------CEEEeCCCCCCcChhhH--HHHHHHHHHHHHh
Confidence 999999999999 888887 7544 57889999998653322 3566678889875
No 144
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.61 E-value=2.7e-14 Score=144.77 Aligned_cols=223 Identities=17% Similarity=0.167 Sum_probs=129.1
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+.+.||.+|.....-|+ ..|.||++||..+... .|.. ....|+++||.|+++|+||.|.....
T Consensus 4 ~~~~~g~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~-~~~~L~~~g~~vi~~D~~G~G~S~~~-------- 66 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPR------DAPVIHFHHGWPLSAD--DWDA-QLLFFLAHGYRVVAHDRRGHGRSSQV-------- 66 (276)
T ss_dssp EECTTSCEEEEEEESCT------TSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EECCCCcEEEEEecCCC------CCCeEEEECCCCcchh--HHHH-HHHHHHhCCCEEEEecCCCCCCCCCC--------
Confidence 45678888765544221 3478999999765543 3444 34566667999999999996654311
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcchhcccc---ccccC-----
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALDMLRFN---KFTIA----- 614 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~---~~~~~----- 614 (734)
....+++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+........ .....
T Consensus 67 ~~~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 144 (276)
T 1zoi_A 67 WDGHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFD 144 (276)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHH
Confidence 1123455555554444443 2345799999999999999877776 99999999877542110000 00000
Q ss_pred ----------cccc------cccCC-----CCCHHHHHH----------------HHhC---CccCCCCCCCCCccCCcE
Q psy4818 615 ----------YYSE------SEFGS-----PNNKTHFHN----------------LLSY---SPLHNIKVPPNNTQYPAT 654 (734)
Q Consensus 615 ----------~~~~------~~~g~-----~~~~~~~~~----------------~~~~---sp~~~~~~p~~~~~~P~~ 654 (734)
..+. ..++. ....+.... +... .....+.. +++| +
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~ 219 (276)
T 1zoi_A 145 GFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKG----IQQP-V 219 (276)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHH----CCSC-E
T ss_pred HHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccc----cCCC-E
Confidence 0000 00110 011111111 1111 11111222 6677 9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 655 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 655 Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
|+++|++|..+|+....+..+++ -...++++++++||...... ..+..+.+.+||.
T Consensus 220 l~i~G~~D~~~~~~~~~~~~~~~----------~~~~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 220 LVMHGDDDQIVPYENSGVLSAKL----------LPNGALKTYKGYPHGMPTTH--ADVINADLLAFIR 275 (276)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH----------STTEEEEEETTCCTTHHHHT--HHHHHHHHHHHHT
T ss_pred EEEEcCCCcccChHHHHHHHHhh----------CCCceEEEcCCCCCchhhhC--HHHHHHHHHHHhc
Confidence 99999999999988554443332 22468899999999864322 2455666778874
No 145
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.60 E-value=1.1e-14 Score=147.04 Aligned_cols=220 Identities=12% Similarity=0.038 Sum_probs=133.1
Q ss_pred EEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccc
Q psy4818 464 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 543 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~ 543 (734)
+.+.||.+|.....-+ +..|+||++||...... .|... ...|++ +|.|+++|.||.|.... .
T Consensus 9 ~~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~~~--~w~~~-~~~L~~-~~~vi~~D~rG~G~S~~--------~ 70 (266)
T 3om8_A 9 LATSDGASLAYRLDGA------AEKPLLALSNSIGTTLH--MWDAQ-LPALTR-HFRVLRYDARGHGASSV--------P 70 (266)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCGG--GGGGG-HHHHHT-TCEEEEECCTTSTTSCC--------C
T ss_pred EeccCCcEEEEEecCC------CCCCEEEEeCCCccCHH--HHHHH-HHHhhc-CcEEEEEcCCCCCCCCC--------C
Confidence 4567898887654322 24688999999755443 34443 356775 89999999999664431 1
Q ss_pred cCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc------c----c-cc
Q psy4818 544 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF------N----K-FT 612 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~------~----~-~~ 612 (734)
.....++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+..+...+... . . ..
T Consensus 71 ~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (266)
T 3om8_A 71 PGPYTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAED 148 (266)
T ss_dssp CSCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcccc
Confidence 12345666666666665542 3457999999999999999999999999999987653211000 0 0 00
Q ss_pred cC-------cccc-ccc--CCCCCHHHH----------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCC
Q psy4818 613 IA-------YYSE-SEF--GSPNNKTHF----------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 666 (734)
Q Consensus 613 ~~-------~~~~-~~~--g~~~~~~~~----------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~ 666 (734)
.. ..|. ..+ ..+...+.+ ..+........+.. ++.| +||++|++|..+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~~P-~Lvi~G~~D~~~~ 223 (266)
T 3om8_A 149 MSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLAR----IERP-TLVIAGAYDTVTA 223 (266)
T ss_dssp SHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGG----CCSC-EEEEEETTCSSSC
T ss_pred HHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcC----CCCC-EEEEEeCCCCCCC
Confidence 00 0000 000 001000111 01111111122333 7777 9999999999999
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 667 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 667 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+.++..+.+.+... ++++++ +||....... .+..+.+.+||.
T Consensus 224 ~~~~~~l~~~ip~a-----------~~~~i~-~gH~~~~e~p--~~~~~~i~~Fl~ 265 (266)
T 3om8_A 224 ASHGELIAASIAGA-----------RLVTLP-AVHLSNVEFP--QAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHHHSTTC-----------EEEEES-CCSCHHHHCH--HHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCC-----------EEEEeC-CCCCccccCH--HHHHHHHHHHhc
Confidence 99888887776544 677777 7997643322 345556677763
No 146
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.60 E-value=3.2e-15 Score=149.05 Aligned_cols=204 Identities=17% Similarity=0.161 Sum_probs=120.5
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCch----hHHHHHHHHHHHcC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF----DDFQAAAEYMINKK 563 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~----~D~~~~~~~l~~~~ 563 (734)
.|.||++||..+... .|.. ....|+++||.|+++|+||.|... .. .....+ +|+.+++++|.+.+
T Consensus 16 ~~~vvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~GhG~s~---~~-----~~~~~~~~~~~d~~~~~~~l~~~~ 84 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA--DVRM-LGRFLESKGYTCHAPIYKGHGVPP---EE-----LVHTGPDDWWQDVMNGYEFLKNKG 84 (247)
T ss_dssp SCEEEEECCTTCCTH--HHHH-HHHHHHHTTCEEEECCCTTSSSCH---HH-----HTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCCChH--HHHH-HHHHHHHCCCEEEecccCCCCCCH---HH-----hcCCCHHHHHHHHHHHHHHHHHcC
Confidence 477899999765543 2333 446676679999999999966321 11 111122 44555566665544
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEE-cCCcchhc--ccc-cc-ccCcccccccCC---------------
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI-LVGALDML--RFN-KF-TIAYYSESEFGS--------------- 623 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~-~~~~~d~~--~~~-~~-~~~~~~~~~~g~--------------- 623 (734)
.+++.++|+|+||.+++.++.++| ++++|+ ..|..... ... .. .....+....+.
T Consensus 85 ---~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
T 1tqh_A 85 ---YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQT 159 (247)
T ss_dssp ---CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTS
T ss_pred ---CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCC
Confidence 357999999999999999999999 677664 34432100 000 00 000000000000
Q ss_pred C-CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCC
Q psy4818 624 P-NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 702 (734)
Q Consensus 624 ~-~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~ 702 (734)
+ .....+..+. .+....+.. +++| +||++|++|..+|+..+.++++.+.. ...++++++++||.
T Consensus 160 ~~~~~~~~~~~~-~~~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~~---------~~~~~~~~~~~gH~ 224 (247)
T 1tqh_A 160 PMKTLKALQELI-ADVRDHLDL----IYAP-TFVVQARHDEMINPDSANIIYNEIES---------PVKQIKWYEQSGHV 224 (247)
T ss_dssp CCTTHHHHHHHH-HHHHHTGGG----CCSC-EEEEEETTCSSSCTTHHHHHHHHCCC---------SSEEEEEETTCCSS
T ss_pred CHHHHHHHHHHH-HHHHhhccc----CCCC-EEEEecCCCCCCCcchHHHHHHhcCC---------CceEEEEeCCCcee
Confidence 0 0000011000 011123333 6777 99999999999999998888776632 24689999999998
Q ss_pred CCCchHHhHHHHHHHHHHHHH
Q psy4818 703 QGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 703 ~~~~~~~~~~~~~~~~~fl~~ 723 (734)
...... ..+..+.+.+||.+
T Consensus 225 ~~~e~~-~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 225 ITLDQE-KDQLHEDIYAFLES 244 (247)
T ss_dssp GGGSTT-HHHHHHHHHHHHHH
T ss_pred eccCcc-HHHHHHHHHHHHHh
Confidence 754322 13566778899875
No 147
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.60 E-value=5.9e-15 Score=151.69 Aligned_cols=222 Identities=11% Similarity=0.038 Sum_probs=135.6
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++..... ++.|+||++||..+.... |......++. +||.|+++|+||.|.... .....
T Consensus 17 ~g~~l~~~~~--------g~~~~vv~~HG~~~~~~~--~~~~~~~l~~-~g~~v~~~d~~G~G~S~~--------~~~~~ 77 (309)
T 3u1t_A 17 EGATIAYVDE--------GSGQPVLFLHGNPTSSYL--WRNIIPYVVA-AGYRAVAPDLIGMGDSAK--------PDIEY 77 (309)
T ss_dssp TTEEEEEEEE--------ECSSEEEEECCTTCCGGG--GTTTHHHHHH-TTCEEEEECCTTSTTSCC--------CSSCC
T ss_pred CCeEEEEEEc--------CCCCEEEEECCCcchhhh--HHHHHHHHHh-CCCEEEEEccCCCCCCCC--------CCccc
Confidence 6777655432 235789999998665443 4433333354 599999999999654331 12245
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----c-----------cc
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----K-----------FT 612 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~-----------~~ 612 (734)
.++++.+.+..+++. ...+++.|+|||+||++++.++.++|++++++|+..|........ . ..
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
T 3u1t_A 78 RLQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLR 155 (309)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHh
Confidence 677777766666654 234689999999999999999999999999999887654322000 0 00
Q ss_pred cC----------ccccc----c--cCCCCCHHHHHHHHhCCcc-------------------------------CCCCCC
Q psy4818 613 IA----------YYSES----E--FGSPNNKTHFHNLLSYSPL-------------------------------HNIKVP 645 (734)
Q Consensus 613 ~~----------~~~~~----~--~g~~~~~~~~~~~~~~sp~-------------------------------~~~~~p 645 (734)
.. ..+.. . .......+....+...... ..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 234 (309)
T 3u1t_A 156 TADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA- 234 (309)
T ss_dssp STTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH-
T ss_pred ccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc-
Confidence 00 00000 0 0011111211111111000 00111
Q ss_pred CCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 646 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 646 ~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+++| +|+++|++|..+|+..+.++.+.+.. ..+.+++++||...... ..+....+.+||.++.
T Consensus 235 ---i~~P-~l~i~G~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~gH~~~~~~--p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 235 ---SPIP-KLLFHAEPGALAPKPVVDYLSENVPN-----------LEVRFVGAGTHFLQEDH--PHLIGQGIADWLRRNK 297 (309)
T ss_dssp ---CCSC-EEEEEEEECSSSCHHHHHHHHHHSTT-----------EEEEEEEEESSCHHHHC--HHHHHHHHHHHHHHHC
T ss_pred ---CCCC-EEEEecCCCCCCCHHHHHHHHhhCCC-----------CEEEEecCCcccchhhC--HHHHHHHHHHHHHhcc
Confidence 4566 99999999999998887777776543 35666699999764332 2456667899999987
Q ss_pred CCC
Q psy4818 726 GLK 728 (734)
Q Consensus 726 ~~~ 728 (734)
+..
T Consensus 298 ~~~ 300 (309)
T 3u1t_A 298 PHA 300 (309)
T ss_dssp CCC
T ss_pred hhh
Confidence 654
No 148
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.60 E-value=3.2e-15 Score=147.94 Aligned_cols=184 Identities=13% Similarity=0.086 Sum_probs=119.0
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHH-----
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI----- 560 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~----- 560 (734)
++.|+||++||..+.... |. . ...|. +||.|+++|+||.|... .....+++++...+..++
T Consensus 14 ~~~~~vv~~hG~~~~~~~--~~-~-~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~ 79 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKI--FG-E-LEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEV 79 (245)
T ss_dssp TCSCEEEEECCTTCCGGG--GT-T-GGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEEEeCCcccHHH--HH-H-HHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhh
Confidence 357899999998766543 33 2 23455 59999999999965432 112345667766666665
Q ss_pred -HcCCCCCCcEEEEEcChHHHHHHHHHhc-CCCceeEEEEcCCcchhccccccc-------cCc-------------ccc
Q psy4818 561 -NKKYTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKFT-------IAY-------------YSE 618 (734)
Q Consensus 561 -~~~~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~-------~~~-------------~~~ 618 (734)
+. .. ++.++|+|+||++++.++.+ +|+ ++++|+.+|........... ... .+.
T Consensus 80 ~~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T 3e0x_A 80 TKH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLS 154 (245)
T ss_dssp TTT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHH
T ss_pred Hhh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHH
Confidence 33 23 89999999999999999999 999 99999999877652111000 000 000
Q ss_pred ccc-CC-CCCHH----HHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 619 SEF-GS-PNNKT----HFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 619 ~~~-g~-~~~~~----~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
..+ .. ...+. .+..+..++....+.. ++.| +|+++|++|..+++..+.++++.+. .++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~ 218 (245)
T 3e0x_A 155 EKYFETLEKDPDIMINDLIACKLIDLVDNLKN----IDIP-VKAIVAKDELLTLVEYSEIIKKEVE-----------NSE 218 (245)
T ss_dssp HHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHSS-----------SEE
T ss_pred HHHHHHHhcCcHHHHHHHHHhccccHHHHHHh----CCCC-EEEEEeCCCCCCCHHHHHHHHHHcC-----------Cce
Confidence 000 00 00111 1122233344444443 6677 9999999999999988877766553 358
Q ss_pred EEEeCCCCCCCC
Q psy4818 693 LRVEQDAGHGQG 704 (734)
Q Consensus 693 ~~~~~~~gH~~~ 704 (734)
+++++++||.+.
T Consensus 219 ~~~~~~~gH~~~ 230 (245)
T 3e0x_A 219 LKIFETGKHFLL 230 (245)
T ss_dssp EEEESSCGGGHH
T ss_pred EEEeCCCCcceE
Confidence 899999999864
No 149
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.60 E-value=1.5e-14 Score=162.27 Aligned_cols=125 Identities=16% Similarity=0.121 Sum_probs=87.0
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
.+..+++..||.++..... ++.|+||++||+.+... .|.. ....|+++||.|+++|+||.|.... .
T Consensus 237 ~~~~~~~~~dg~~l~~~~~--------g~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~D~~G~G~S~~---~ 302 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESWY--SWRY-QIPALAQAGYRVLAMDMKGYGESSA---P 302 (555)
T ss_dssp SEEEEEEEETTEEEEEEEE--------CSSSEEEEECCTTCCGG--GGTT-HHHHHHHTTCEEEEECCTTSTTSCC---C
T ss_pred cceeEEEeCCCcEEEEEEc--------CCCCEEEEEeCCCCchh--HHHH-HHHHHHhCCCEEEEecCCCCCCCCC---C
Confidence 4555666678988875432 24689999999876654 3443 3456667799999999999654321 1
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
. ......++++.+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+.+|.
T Consensus 303 ~---~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 303 P---EIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp S---CGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred C---CcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 1 11223455555554444443 24568999999999999999999999999999987764
No 150
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.59 E-value=3.4e-14 Score=145.88 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=85.4
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.||.++.....-+ ...|.||++||..+... .|...+...|+++||.|+++|+||.|..... . .....
T Consensus 8 ~~g~~l~y~~~G~------~~~~~vvllHG~~~~~~--~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~--~---~~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGD------PADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTR--D---FAAHP 74 (298)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCC--C---TTTSC
T ss_pred cCCeEEEEEeccC------CCCCeEEEEcCCCCCcc--chHHHHHHHHHhCCCEEEeeCCCCCCCCCCC--C---CCcCC
Confidence 4787776554322 23478999999865543 4555454667777999999999996654310 0 01123
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
.+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+..
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 4566776666666554 344689999999999999999999999999999876644
No 151
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.59 E-value=2.2e-15 Score=152.23 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=120.0
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||+.+.... |.. +...|++ ||.|+++|+||.|..... .......++++.+.+..+++. .+
T Consensus 22 ~~~~vv~~HG~~~~~~~--~~~-~~~~L~~-~~~vi~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~~~~~~--l~ 89 (278)
T 3oos_A 22 EGPPLCVTHLYSEYNDN--GNT-FANPFTD-HYSVYLVNLKGCGNSDSA------KNDSEYSMTETIKDLEAIREA--LY 89 (278)
T ss_dssp SSSEEEECCSSEECCTT--CCT-TTGGGGG-TSEEEEECCTTSTTSCCC------SSGGGGSHHHHHHHHHHHHHH--TT
T ss_pred CCCeEEEEcCCCcchHH--HHH-HHHHhhc-CceEEEEcCCCCCCCCCC------CCcccCcHHHHHHHHHHHHHH--hC
Confidence 45789999998665544 332 2356776 999999999996643211 111234567777777666665 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccc----cCcc-------ccccc--------------
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IAYY-------SESEF-------------- 621 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~~~~-------~~~~~-------------- 621 (734)
.+++.++|||+||.+++.++.++|++++++|+..|........... .... ....+
T Consensus 90 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (278)
T 3oos_A 90 INKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALS 169 (278)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHH
T ss_pred CCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHH
Confidence 4589999999999999999999999999999999877611100000 0000 00000
Q ss_pred ------------------CCCC----CHHHHHHHH-----hCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHH
Q psy4818 622 ------------------GSPN----NKTHFHNLL-----SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 674 (734)
Q Consensus 622 ------------------g~~~----~~~~~~~~~-----~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~ 674 (734)
..+. ....+..+. ..+....+.. +++| +|+++|++|..+++..+.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~ 244 (278)
T 3oos_A 170 REWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKF----VKIP-SFIYCGKHDVQCPYIFSCEIA 244 (278)
T ss_dssp HHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTT----CCSC-EEEEEETTCSSSCHHHHHHHH
T ss_pred HHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhC----CCCC-EEEEEeccCCCCCHHHHHHHH
Confidence 0000 001111111 1111122232 6777 999999999999998887777
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 675 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 675 ~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
+.+. .+++++++++||...
T Consensus 245 ~~~~-----------~~~~~~~~~~gH~~~ 263 (278)
T 3oos_A 245 NLIP-----------NATLTKFEESNHNPF 263 (278)
T ss_dssp HHST-----------TEEEEEETTCSSCHH
T ss_pred hhCC-----------CcEEEEcCCcCCCcc
Confidence 6653 348899999999864
No 152
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.59 E-value=2.9e-14 Score=145.02 Aligned_cols=205 Identities=15% Similarity=0.087 Sum_probs=118.8
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||.++.... |.... ..|.++||.|+++|+||.|.... .....+++++.+.+..+++. ...
T Consensus 27 g~~vvllHG~~~~~~~--w~~~~-~~l~~~g~~vi~~D~~G~G~S~~--------~~~~~~~~~~a~dl~~ll~~--l~~ 93 (281)
T 3fob_A 27 GKPVVLIHGWPLSGRS--WEYQV-PALVEAGYRVITYDRRGFGKSSQ--------PWEGYEYDTFTSDLHQLLEQ--LEL 93 (281)
T ss_dssp SEEEEEECCTTCCGGG--GTTTH-HHHHHTTEEEEEECCTTSTTSCC--------CSSCCSHHHHHHHHHHHHHH--TTC
T ss_pred CCeEEEECCCCCcHHH--HHHHH-HHHHhCCCEEEEeCCCCCCCCCC--------CccccCHHHHHHHHHHHHHH--cCC
Confidence 4668889998776554 33333 45555699999999999664431 11234566766666666655 244
Q ss_pred CcEEEEEcChHHHHHHHHHhc-CCCceeEEEEcCCcchhccc-cccccC--c--------------------ccccc-cC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRF-NKFTIA--Y--------------------YSESE-FG 622 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~-~~~~~~--~--------------------~~~~~-~g 622 (734)
+++.|+|||+||.+++.++.+ .|++++++|+..+....... .....+ . .+... +.
T Consensus 94 ~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (281)
T 3fob_A 94 QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFA 173 (281)
T ss_dssp CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcc
Confidence 689999999999877766554 58999999887654211100 000000 0 00000 00
Q ss_pred -----CCCCHHHH-------------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHH
Q psy4818 623 -----SPNNKTHF-------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQ 678 (734)
Q Consensus 623 -----~~~~~~~~-------------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~ 678 (734)
.....+.. ..+...+....+.. +++| +||++|++|..+|+..+.++.++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~~~~~~- 247 (281)
T 3fob_A 174 AGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEK----FNIP-TLIIHGDSDATVPFEYSGKLTHEA- 247 (281)
T ss_dssp BTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTT----CCSC-EEEEEETTCSSSCGGGTHHHHHHH-
T ss_pred cccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhh----cCCC-EEEEecCCCCCcCHHHHHHHHHHh-
Confidence 00111110 01111111122333 6777 999999999999998764443322
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 679 EKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
-...++.+++++||....... .+..+.+.+||.
T Consensus 248 ---------~p~~~~~~i~~~gH~~~~e~p--~~~~~~i~~Fl~ 280 (281)
T 3fob_A 248 ---------IPNSKVALIKGGPHGLNATHA--KEFNEALLLFLK 280 (281)
T ss_dssp ---------STTCEEEEETTCCTTHHHHTH--HHHHHHHHHHHC
T ss_pred ---------CCCceEEEeCCCCCchhhhhH--HHHHHHHHHHhh
Confidence 123478999999998643322 355566777763
No 153
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=1e-14 Score=146.60 Aligned_cols=210 Identities=10% Similarity=0.073 Sum_probs=129.8
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||..+.... |.. +...|++ ||.|+++|+||.|....... ......+++++.+.+..+++. .+
T Consensus 19 ~~p~vv~~HG~~~~~~~--~~~-~~~~l~~-g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 88 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSA--WNR-ILPFFLR-DYRVVLYDLVCAGSVNPDFF----DFRRYTTLDPYVDDLLHILDA--LG 88 (269)
T ss_dssp CSSEEEEECCTTCCGGG--GTT-TGGGGTT-TCEEEEECCTTSTTSCGGGC----CTTTCSSSHHHHHHHHHHHHH--TT
T ss_pred CCCEEEEEeCCCCcHHH--HHH-HHHHHhC-CcEEEEEcCCCCCCCCCCCC----CccccCcHHHHHHHHHHHHHh--cC
Confidence 45899999997655433 332 3356776 99999999999665432110 111223567777776666655 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccC-----------------cccccc----cCCCC
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA-----------------YYSESE----FGSPN 625 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~-----------------~~~~~~----~g~~~ 625 (734)
.+++.++|||+||++++.++.++|++++++|+..|............. ..|... .....
T Consensus 89 ~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
T 4dnp_A 89 IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD 168 (269)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCC
Confidence 568999999999999999999999999999999886543221100000 000000 00011
Q ss_pred CHHHH-------------------HHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCC
Q psy4818 626 NKTHF-------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 686 (734)
Q Consensus 626 ~~~~~-------------------~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~ 686 (734)
..+.. ..+...+....+.. ++.| +|+++|++|..+++..+.++.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-------- 235 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGL----VKVP-CHIFQTARDHSVPASVATYLKNHLG-------- 235 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGG----CCSC-EEEEEEESBTTBCHHHHHHHHHHSS--------
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhcc----ccCC-EEEEecCCCcccCHHHHHHHHHhCC--------
Confidence 11111 11112222233333 6777 9999999999999988877776553
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 687 QKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 687 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
..+++++++++||....... .+....+.+||.+
T Consensus 236 --~~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 236 --GKNTVHWLNIEGHLPHLSAP--TLLAQELRRALSH 268 (269)
T ss_dssp --SCEEEEEEEEESSCHHHHCH--HHHHHHHHHHHC-
T ss_pred --CCceEEEeCCCCCCccccCH--HHHHHHHHHHHhh
Confidence 22688999999998643222 3455566777754
No 154
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.59 E-value=6.8e-14 Score=160.79 Aligned_cols=260 Identities=10% Similarity=-0.031 Sum_probs=160.6
Q ss_pred EeCCe-EEEEEEcCCCCeeEEEEEeCC--C-CCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC-----CCceE
Q psy4818 98 RQENN-YFYFHNKGLQNHSILYVQRNL--T-GSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-----GSDWN 168 (734)
Q Consensus 98 ~~g~~-~~~~~~~~~~~~~~l~~~~~~--~-g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~-----g~~~~ 168 (734)
|||++ ++|..... ..||+.+.. + +..+.|+.... ..+...+..++|||||++|+|+.... +....
T Consensus 88 PDg~~~la~~~~~~----~~l~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 88 PAGGPLLVFTHFGD----QRLYAFEPDAPGGAVPRPLTPVSA--VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp SSSSCEEEEEBTTT----CCEEEECTTSTTCCCCEECSCCCC--STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred cCCCeEEEEEECCC----CeEEEEcCCCCCCCCCEeccCCcc--CCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 78999 88876542 458988865 4 66666654210 00235578899999999999998641 13347
Q ss_pred EEEEEECCC------CCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC-CCCC-CC
Q psy4818 169 TLHIKDVDT------GKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG-TEQD-KD 239 (734)
Q Consensus 169 ~l~v~dl~~------g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-t~~~-~~ 239 (734)
+|+++|+++ |+....+ ........++|||||++|+|.+.+... ......+||++++. ++.. +.
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~--------~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR--------MPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC--------CTTTCEEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC--------CCCCCcEEEEEEECCCCccccc
Confidence 999999998 6654433 323334679999999999999864310 01123579999998 3411 12
Q ss_pred eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc----------eEEE
Q psy4818 240 IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH----------HHEI 309 (734)
Q Consensus 240 ~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~----------~~~~ 309 (734)
..+.... ......+.|||||+ |++..... ....||++|++++.. ..++..... ....
T Consensus 234 ~~l~~~~--~~~~~~~~~spdg~-l~~~~~~~-~~~~l~~~~~~~~~~---------~~l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 234 RTLLGGP--EEAIAQAEWAPDGS-LIVATDRT-GWWNLHRVDPATGAA---------TQLCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp EEEEEET--TBCEEEEEECTTSC-EEEEECTT-SSCEEEEECTTTCCE---------EESSCCSSBSSCCCCSTTCCSEE
T ss_pred EEeCCCC--CceEcceEECCCCe-EEEEECCC-CCeEEEEEECCCCce---------eecccccccccCccccccCceEe
Confidence 2233321 22456799999999 77766543 335899999876332 222211110 0112
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC-ceeEEEEECCCCce
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV-RSVMDLHDLNTGKR 388 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~~dl~~g~~ 388 (734)
++++++ +++..+. ...+|+.+|++++. .+.+..+. ..+..+...+++.+++...... ...|+++|+.+|+.
T Consensus 301 ~~~~~~-~~~~~~~--~~~~l~~~d~~~~~---~~~l~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 301 PLANGL-IAVVHGK--GAAVLGILDPESGE---LVDAAGPW--TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp ECTTSC-EEEEEBS--SSCEEEEEETTTTE---EEECCSSC--CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeCCCE-EEEEEEc--CccEEEEEECCCCc---EEEecCCC--CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 556655 6666665 46679999988765 35554332 3344442345577777665443 45899999977765
Q ss_pred eeeeC
Q psy4818 389 LHSFP 393 (734)
Q Consensus 389 ~~~l~ 393 (734)
+.++
T Consensus 373 -~~l~ 376 (662)
T 3azo_A 373 -RTIG 376 (662)
T ss_dssp -EEEE
T ss_pred -EEee
Confidence 4443
No 155
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.59 E-value=1.7e-14 Score=144.38 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=125.2
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++.....- ...|.||++||..+.. ...|.. ....|.++||.|+++|+||.|..... . ......
T Consensus 10 ~g~~l~~~~~g-------~~~~~vvllHG~~~~~-~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~---~--~~~~~~ 75 (254)
T 2ocg_A 10 NGVQLHYQQTG-------EGDHAVLLLPGMLGSG-ETDFGP-QLKNLNKKLFTVVAWDPRGYGHSRPP---D--RDFPAD 75 (254)
T ss_dssp TTEEEEEEEEE-------CCSEEEEEECCTTCCH-HHHCHH-HHHHSCTTTEEEEEECCTTSTTCCSS---C--CCCCTT
T ss_pred CCEEEEEEEec-------CCCCeEEEECCCCCCC-ccchHH-HHHHHhhCCCeEEEECCCCCCCCCCC---C--CCCChH
Confidence 67766544321 1235789999976541 122443 34567777899999999996654211 0 011111
Q ss_pred chh-HHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-----cccccCccccc--
Q psy4818 548 CFD-DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-----NKFTIAYYSES-- 619 (734)
Q Consensus 548 ~~~-D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-----~~~~~~~~~~~-- 619 (734)
.++ ++.++++++.+. +.+++.++|||+||.+++.++.++|++++++|+..+...+... ........|..
T Consensus 76 ~~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (254)
T 2ocg_A 76 FFERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERT 152 (254)
T ss_dssp HHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHH
T ss_pred HHHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHh
Confidence 132 334444444443 3468999999999999999999999999999987764321100 00000001110
Q ss_pred ------ccCCCCCHH----HHHHHHhCC-------ccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 620 ------EFGSPNNKT----HFHNLLSYS-------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 620 ------~~g~~~~~~----~~~~~~~~s-------p~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
.++...... ....+.... ....+.. +++| +||++|++|..+|+..+..+.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~--- 224 (254)
T 2ocg_A 153 RKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPR----VQCP-ALIVHGEKDPLVPRFHADFIHKHVKG--- 224 (254)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHSTT---
T ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhc----ccCC-EEEEecCCCccCCHHHHHHHHHhCCC---
Confidence 011000000 001111110 0112222 6777 99999999999999888777665543
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHH
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
.++++++++||....... .+..+.+.+||
T Consensus 225 --------~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl 253 (254)
T 2ocg_A 225 --------SRLHLMPEGKHNLHLRFA--DEFNKLAEDFL 253 (254)
T ss_dssp --------CEEEEETTCCTTHHHHTH--HHHHHHHHHHH
T ss_pred --------CEEEEcCCCCCchhhhCH--HHHHHHHHHHh
Confidence 378889999998653222 34555566776
No 156
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.59 E-value=8.2e-15 Score=148.44 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=89.8
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.+|....+.+ +..|+||++||..+.... |.. +...|.++||.|+++|+||.|.... . .....
T Consensus 11 ~~g~~l~~~~~g~------~~~~~vv~~hG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~G~G~s~~---~---~~~~~ 75 (286)
T 3qit_A 11 FGGNQICLCSWGS------PEHPVVLCIHGILEQGLA--WQE-VALPLAAQGYRVVAPDLFGHGRSSH---L---EMVTS 75 (286)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCGGG--GHH-HHHHHHHTTCEEEEECCTTSTTSCC---C---SSGGG
T ss_pred cCCceEEEeecCC------CCCCEEEEECCCCcccch--HHH-HHHHhhhcCeEEEEECCCCCCCCCC---C---CCCCC
Confidence 4788888776643 346899999998765543 443 4566777799999999999554321 1 11133
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 605 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~ 605 (734)
..++++.+.+..++++ .+.+++.++|+|+||++++.++.++|+.++++|+.+|....
T Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp CSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 4567777777766665 34468999999999999999999999999999999887643
No 157
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.58 E-value=1.4e-14 Score=148.16 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=78.7
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++.....-+ +.+.|.||++||+++....+ |. .+..++ +.||.|+++|+||.|.... .. ....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~~~~-~~-~~~~l~-~~g~~vi~~D~~G~G~S~~---~~----~~~~ 77 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMSHDY-LL-SLRDMT-KEGITVLFYDQFGCGRSEE---PD----QSKF 77 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCCSGG-GG-GGGGGG-GGTEEEEEECCTTSTTSCC---CC----GGGC
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcchhH-HH-HHHHHH-hcCcEEEEecCCCCccCCC---CC----CCcc
Confidence 676665443321 11237889999987655332 22 233444 5699999999999664321 11 1123
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
+++++.+.+..+++.- ...+++.|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 78 ~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 78 TIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 133 (293)
T ss_dssp SHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred cHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC
Confidence 4555555555444431 0235799999999999999999999999999999888654
No 158
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.58 E-value=2.4e-14 Score=147.63 Aligned_cols=227 Identities=15% Similarity=0.117 Sum_probs=135.4
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 538 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~ 538 (734)
.+...++. +|.++..+..- .+..|+||++||+.+.... |.. +...|++ ||.|+++|+||.|+....
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g------~~~~~~vv~lHG~~~~~~~--~~~-~~~~L~~-g~~vi~~D~~G~gG~s~~--- 110 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASG------PEDAPPLVLLHGALFSSTM--WYP-NIADWSS-KYRTYAVDIIGDKNKSIP--- 110 (306)
T ss_dssp CEEEEECC-TTEEEEEEEES------CTTSCEEEEECCTTTCGGG--GTT-THHHHHH-HSEEEEECCTTSSSSCEE---
T ss_pred cceEEEec-CCceEEEEeeC------CCCCCeEEEECCCCCCHHH--HHH-HHHHHhc-CCEEEEecCCCCCCCCCC---
Confidence 34555554 44456554422 1346899999998765543 333 2355676 999999999996332211
Q ss_pred ccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc----ccC
Q psy4818 539 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF----TIA 614 (734)
Q Consensus 539 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~----~~~ 614 (734)
......++++...+..+++. .+.+++.++|+|+||++++.++.++|++++++|+.+|.......... ...
T Consensus 111 ----~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (306)
T 2r11_A 111 ----ENVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALG 184 (306)
T ss_dssp ----CSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHT
T ss_pred ----CCCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhH
Confidence 11234567777766666654 34468999999999999999999999999999999987754221100 000
Q ss_pred ---ccccc---cc--CCC-CCHHHH---HHH-Hh----CCccC-------------CCCCCCCCccCCcEEEEecCCCCC
Q psy4818 615 ---YYSES---EF--GSP-NNKTHF---HNL-LS----YSPLH-------------NIKVPPNNTQYPATLVLTGDHDDR 664 (734)
Q Consensus 615 ---~~~~~---~~--g~~-~~~~~~---~~~-~~----~sp~~-------------~~~~p~~~~~~P~~Li~~g~~D~~ 664 (734)
..+.. .+ +.. .....+ ... .. ...+. .+. .+++| +|+++|++|..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P-~lii~G~~D~~ 259 (306)
T 2r11_A 185 LTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELR----SARVP-ILLLLGEHEVI 259 (306)
T ss_dssp TTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHH----TCCSC-EEEEEETTCCS
T ss_pred HHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHh----cCCCC-EEEEEeCCCcc
Confidence 00000 00 110 000000 000 00 00000 011 25667 99999999999
Q ss_pred CCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 665 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 665 v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+++.++.++.+++ ...+++++++++||....... .+....+.+||.
T Consensus 260 ~~~~~~~~~~~~~----------~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~ 305 (306)
T 2r11_A 260 YDPHSALHRASSF----------VPDIEAEVIKNAGHVLSMEQP--TYVNERVMRFFN 305 (306)
T ss_dssp SCHHHHHHHHHHH----------STTCEEEEETTCCTTHHHHSH--HHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHH----------CCCCEEEEeCCCCCCCcccCH--HHHHHHHHHHHh
Confidence 9988777665543 223578999999997643222 355566777764
No 159
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.58 E-value=2.5e-12 Score=137.24 Aligned_cols=238 Identities=12% Similarity=0.096 Sum_probs=158.0
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
+..++|||||++|+++.... ..|++||+.+++.+...........++|+|||+.|+++...
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d----~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~--------------- 94 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA--------------- 94 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT---------------
T ss_pred cceEEECCCCCEEEEECCCC----CeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC---------------
Confidence 67899999999997766433 37999999999865433322244689999999999887632
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
...|+++++.++.. +..+... . ....+.|+|||++|++.... ...|++||+.++. ....+...
T Consensus 95 ~~~v~v~d~~~~~~--~~~~~~~--~-~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~---------~~~~~~~~ 157 (391)
T 1l0q_A 95 SSTLSVIDTTSNTV--AGTVKTG--K-SPLGLALSPDGKKLYVTNNG---DKTVSVINTVTKA---------VINTVSVG 157 (391)
T ss_dssp TTEEEEEETTTTEE--EEEEECS--S-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---------EEEEEECC
T ss_pred CCEEEEEECCCCeE--EEEEeCC--C-CcceEEECCCCCEEEEEeCC---CCEEEEEECCCCc---------EEEEEecC
Confidence 23799999887642 2233322 2 34678999999999776532 3689999998731 11222211
Q ss_pred cceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC-CEEEEEEEeCCceeEEEE
Q psy4818 304 DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-NKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 304 ~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~ 381 (734)
..... .|+|+|+.+++.... ...|+.+|+.++. ....+... ..+..+.+..+ +.+++.........|++|
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~---~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS---VIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---EEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred CCcceEEECCCCCEEEEEeCC---CCEEEEEECCCCe---EEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 22223 399999988776544 3569999998764 33444433 23344444433 455555442244689999
Q ss_pred ECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+++.+..+.... .+..+.++++++.++++.+.. ..++.+|+
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~ 273 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFX---NTVSVIDT 273 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTT---TEEEEEET
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCC---CEEEEEEC
Confidence 998888777776543 355778889998887776443 57999999
No 160
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.58 E-value=3.5e-14 Score=147.03 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=84.0
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcc
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 540 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~ 540 (734)
..+++..||.++.....-+ ...|.||++||+++......+ ..++...||.|+++|+||.|.... .
T Consensus 16 ~~~~~~~~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~~----~~~~~~~~~~vi~~D~~G~G~S~~---~-- 80 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGN------PNGKPAVFIHGGPGGGISPHH----RQLFDPERYKVLLFDQRGCGRSRP---H-- 80 (317)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECCTTTCCCCGGG----GGGSCTTTEEEEEECCTTSTTCBS---T--
T ss_pred eeEEEcCCCcEEEEEEcCC------CCCCcEEEECCCCCcccchhh----hhhccccCCeEEEECCCCCCCCCC---C--
Confidence 3456666888776543322 123568999998765432222 233434699999999999654321 1
Q ss_pred ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 541 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 541 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.......++++.+.+..+++. .+.+++.|+|||+||.+++.++.++|++++++|+..+.
T Consensus 81 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 -ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp -TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 111234567777777776665 34467999999999999999999999999999987654
No 161
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1e-14 Score=144.88 Aligned_cols=211 Identities=14% Similarity=0.096 Sum_probs=125.9
Q ss_pred CCCcEEEEecCCCCCcCCcc-ccHHHHHHHHhcCeEEEEEecccCC--------------------CCCchhhhcccccc
Q psy4818 486 RRNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGG--------------------ELGEDWHNAGRLLK 544 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~~--------------------~~g~~~~~~~~~~~ 544 (734)
.+.|+||++||..+...... ....+...|.++||.|+.+|.|+.. +....|....
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~---- 78 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHS---- 78 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCC----
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCC----
Confidence 35689999999755443211 1123455666669999999999321 1112333211
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCC------CceeEEEEcCCcchhccccccccCcccc
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP------ELYGAALILVGALDMLRFNKFTIAYYSE 618 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p------~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 618 (734)
.....+|+.+++++|.+....+..+++|+|+|+||.+++.++.+.+ ..+++++..+++......... .+.
T Consensus 79 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~-~~~--- 154 (243)
T 1ycd_A 79 EISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEH-PGE--- 154 (243)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTS-TTC---
T ss_pred CCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccccc-ccc---
Confidence 1123456667777765542234468999999999999999987642 146777777776532111000 000
Q ss_pred cccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy4818 619 SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 698 (734)
Q Consensus 619 ~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 698 (734)
..+. +.+ . ..+..+.. +++| +|++||++|+.||+.++.++++.++..... ...... .++++
T Consensus 155 ~~~~-----~~~---~--~~~~~~~~----~~~P-~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~---~~~~~~-~~~~~ 215 (243)
T 1ycd_A 155 LRIT-----EKF---R--DSFAVKPD----MKTK-MIFIYGASDQAVPSVRSKYLYDIYLKAQNG---NKEKVL-AYEHP 215 (243)
T ss_dssp EEEC-----GGG---T--TTTCCCTT----CCCE-EEEEEETTCSSSCHHHHHHHHHHHHHHTTT---CTTTEE-EEEES
T ss_pred cccc-----hhH---H--HhccCccc----CCCC-EEEEEeCCCCccCHHHHHHHHHHhhhhccc---cccccE-EEecC
Confidence 0000 000 0 11222222 5666 999999999999999999999998764000 001233 45667
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 699 AGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 699 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
+||.+.... +....+.+||.+++..
T Consensus 216 ~gH~~~~~~----~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 216 GGHMVPNKK----DIIRPIVEQITSSLQE 240 (243)
T ss_dssp SSSSCCCCH----HHHHHHHHHHHHHHC-
T ss_pred CCCcCCchH----HHHHHHHHHHHHhhhh
Confidence 899876432 4667789999998764
No 162
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.58 E-value=5e-15 Score=151.33 Aligned_cols=207 Identities=15% Similarity=0.092 Sum_probs=125.2
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
++.|+||++||..+.... |.......|.++||.|+++|+||.|. .-. .....++++.+.+..+++. .
T Consensus 41 g~~~~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~---s~~------~~~~~~~~~~~~~~~~l~~--l 107 (293)
T 3hss_A 41 GTGDPVVFIAGRGGAGRT--WHPHQVPAFLAAGYRCITFDNRGIGA---TEN------AEGFTTQTMVADTAALIET--L 107 (293)
T ss_dssp CSSEEEEEECCTTCCGGG--GTTTTHHHHHHTTEEEEEECCTTSGG---GTT------CCSCCHHHHHHHHHHHHHH--H
T ss_pred CCCCEEEEECCCCCchhh--cchhhhhhHhhcCCeEEEEccCCCCC---CCC------cccCCHHHHHHHHHHHHHh--c
Confidence 356889999998766543 33222344545699999999999532 211 1224566666665555544 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-------------cccCccc------cccc-----
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-------------FTIAYYS------ESEF----- 621 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-------------~~~~~~~------~~~~----- 621 (734)
+.+++.++|+|+||.+++.++.++|+.++++|+.+|......... ......+ ...+
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (293)
T 3hss_A 108 DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTL 187 (293)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHH
T ss_pred CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccc
Confidence 446899999999999999999999999999999988653321100 0000000 0000
Q ss_pred CC---------------CCCHHHHHHHHhC----CccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 622 GS---------------PNNKTHFHNLLSY----SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 622 g~---------------~~~~~~~~~~~~~----sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
.. ......+...... .....+.. +++| +|+++|++|..+++..+.++.+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~g~~D~~~~~~~~~~~~~~~~---- 258 (293)
T 3hss_A 188 NDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRN----IAAP-VLVIGFADDVVTPPYLGREVADALP---- 258 (293)
T ss_dssp TCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTT----CCSC-EEEEEETTCSSSCHHHHHHHHHHST----
T ss_pred cccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhh----CCCC-EEEEEeCCCCCCCHHHHHHHHHHCC----
Confidence 00 0000000000000 01111222 6677 9999999999999988777776653
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.+++++++++||....... .+....+.+||.+
T Consensus 259 -------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 290 (293)
T 3hss_A 259 -------NGRYLQIPDAGHLGFFERP--EAVNTAMLKFFAS 290 (293)
T ss_dssp -------TEEEEEETTCCTTHHHHSH--HHHHHHHHHHHHT
T ss_pred -------CceEEEeCCCcchHhhhCH--HHHHHHHHHHHHh
Confidence 2478999999998643322 3455667778764
No 163
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.58 E-value=2.3e-15 Score=152.46 Aligned_cols=210 Identities=10% Similarity=0.079 Sum_probs=131.2
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+||++||..+... .|.. +...|++ ||.|+++|+||.|........ .....+++++.+.+..+++. .+.
T Consensus 28 ~~~vv~lHG~~~~~~--~~~~-~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~ 97 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN--MWRF-MLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVA--LDL 97 (282)
T ss_dssp SCEEEEECCTTCCGG--GGTT-THHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCeEEEECCCCCCcc--hHHH-HHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHH--cCC
Confidence 389999999766544 3333 3466776 999999999996654322110 01122566776666666654 244
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccC------------------ccccc-----ccCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA------------------YYSES-----EFGSP 624 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~------------------~~~~~-----~~g~~ 624 (734)
+++.++|||+||.+++.++.++|+.++++|+.+|............. ..|.. .++.+
T Consensus 98 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (282)
T 3qvm_A 98 VNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGAS 177 (282)
T ss_dssp CSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTT
T ss_pred CceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCc
Confidence 78999999999999999999999999999999986543321100000 00000 01112
Q ss_pred CCHHHHH-------------------HHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCC
Q psy4818 625 NNKTHFH-------------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 625 ~~~~~~~-------------------~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~ 685 (734)
...+... .+........+.. ++.| +|+++|++|..+++..+.++.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~------- 245 (282)
T 3qvm_A 178 HSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLED----ISTP-ALIFQSAKDSLASPEVGQYMAENIP------- 245 (282)
T ss_dssp SCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGG----CCSC-EEEEEEEECTTCCHHHHHHHHHHSS-------
T ss_pred cchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhc----CCCC-eEEEEeCCCCcCCHHHHHHHHHhCC-------
Confidence 1111111 1111112223333 6677 9999999999999988877766553
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 686 YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
..++++++++||.+.... ..+....+.+||.++.
T Consensus 246 ----~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 246 ----NSQLELIQAEGHCLHMTD--AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp ----SEEEEEEEEESSCHHHHC--HHHHHHHHHHHHHHC-
T ss_pred ----CCcEEEecCCCCcccccC--HHHHHHHHHHHHHhcC
Confidence 348899999999864322 2356667888988753
No 164
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.57 E-value=3.4e-15 Score=150.40 Aligned_cols=208 Identities=14% Similarity=0.040 Sum_probs=124.7
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+.|+||++||..+... .|.... ..|.+ +||.|+++|+||.|.... .. . ..++++...+..++++. .
T Consensus 20 ~~~~vv~lhG~~~~~~--~~~~~~-~~l~~~~g~~v~~~d~~G~G~s~~---~~-----~-~~~~~~~~~~~~~l~~~-~ 86 (272)
T 3fsg_A 20 SGTPIIFLHGLSLDKQ--STCLFF-EPLSNVGQYQRIYLDLPGMGNSDP---IS-----P-STSDNVLETLIEAIEEI-I 86 (272)
T ss_dssp CSSEEEEECCTTCCHH--HHHHHH-TTSTTSTTSEEEEECCTTSTTCCC---CS-----S-CSHHHHHHHHHHHHHHH-H
T ss_pred CCCeEEEEeCCCCcHH--HHHHHH-HHHhccCceEEEEecCCCCCCCCC---CC-----C-CCHHHHHHHHHHHHHHH-h
Confidence 4578999999765442 233322 33544 699999999999554321 11 1 44555555444444331 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccC------ccccc--------cc---CCCCCHH
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA------YYSES--------EF---GSPNNKT 628 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~------~~~~~--------~~---g~~~~~~ 628 (734)
+.+++.++|||+||.+++.++.++|+.++++|+.+|............. ..+.. .+ .......
T Consensus 87 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (272)
T 3fsg_A 87 GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQ 166 (272)
T ss_dssp TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHH
T ss_pred CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCc
Confidence 3468999999999999999999999999999998887532211100000 00000 00 0000001
Q ss_pred H-------------------HHHHHhCCccC-----CCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 629 H-------------------FHNLLSYSPLH-----NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 629 ~-------------------~~~~~~~sp~~-----~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
. ...+.....+. .+.. ++.| +|+++|++|..+|+..+.++.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~------ 235 (272)
T 3fsg_A 167 AWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNIN----YQFP-FKIMVGRNDQVVGYQEQLKLINHNE------ 235 (272)
T ss_dssp HHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCC----CSSC-EEEEEETTCTTTCSHHHHHHHTTCT------
T ss_pred hhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhcc----CCCC-EEEEEeCCCCcCCHHHHHHHHHhcC------
Confidence 0 11111111110 1222 6777 9999999999999988877665442
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 685 PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
.+++++++++||.+..... .+....+.+||.+..
T Consensus 236 -----~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 236 -----NGEIVLLNRTGHNLMIDQR--EAVGFHFDLFLDELN 269 (272)
T ss_dssp -----TEEEEEESSCCSSHHHHTH--HHHHHHHHHHHHHHH
T ss_pred -----CCeEEEecCCCCCchhcCH--HHHHHHHHHHHHHhh
Confidence 3588999999998754322 455667888988754
No 165
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.57 E-value=2.1e-14 Score=144.89 Aligned_cols=219 Identities=14% Similarity=0.058 Sum_probs=132.0
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++.....-+. +.+.|+||++||..+... .|... ...|++ +|.|+++|+||.|.... . ...
T Consensus 9 ~~g~~l~y~~~g~~----~~~~~~vvllHG~~~~~~--~~~~~-~~~L~~-~~~vi~~D~~G~G~S~~---~-----~~~ 72 (266)
T 2xua_A 9 VNGTELHYRIDGER----HGNAPWIVLSNSLGTDLS--MWAPQ-VAALSK-HFRVLRYDTRGHGHSEA---P-----KGP 72 (266)
T ss_dssp CSSSEEEEEEESCS----SSCCCEEEEECCTTCCGG--GGGGG-HHHHHT-TSEEEEECCTTSTTSCC---C-----SSC
T ss_pred ECCEEEEEEEcCCc----cCCCCeEEEecCccCCHH--HHHHH-HHHHhc-CeEEEEecCCCCCCCCC---C-----CCC
Confidence 47777776654331 112588999999655443 34433 455665 79999999999664321 1 123
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc------ccc----c--c-cc
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML------RFN----K--F-TI 613 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~------~~~----~--~-~~ 613 (734)
.+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+..... ... . . ..
T Consensus 73 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 2xua_A 73 YTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHAL 150 (266)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHH
T ss_pred CCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHH
Confidence 4566666666665554 234579999999999999999999999999999887643210 000 0 0 00
Q ss_pred CcccccccCCC----CCHH---------------H----HHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHH
Q psy4818 614 AYYSESEFGSP----NNKT---------------H----FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 670 (734)
Q Consensus 614 ~~~~~~~~g~~----~~~~---------------~----~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~ 670 (734)
.......+..+ ..++ . +..+........+.. +++| +|+++|++|..+++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lvi~G~~D~~~~~~~~ 225 (266)
T 2xua_A 151 ADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPG----IKVP-ALVISGTHDLAATPAQG 225 (266)
T ss_dssp HHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGG----CCSC-EEEEEETTCSSSCHHHH
T ss_pred HHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhcc----CCCC-EEEEEcCCCCcCCHHHH
Confidence 00000011000 0010 0 011122222223333 6777 99999999999999888
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 671 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 671 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
.++.+.+.. .++++++ +||....... .+..+.+.+||.
T Consensus 226 ~~~~~~~~~-----------~~~~~~~-~gH~~~~e~p--~~~~~~i~~fl~ 263 (266)
T 2xua_A 226 RELAQAIAG-----------ARYVELD-ASHISNIERA--DAFTKTVVDFLT 263 (266)
T ss_dssp HHHHHHSTT-----------CEEEEES-CCSSHHHHTH--HHHHHHHHHHHT
T ss_pred HHHHHhCCC-----------CEEEEec-CCCCchhcCH--HHHHHHHHHHHH
Confidence 777665543 3788899 9998653322 355566777875
No 166
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.57 E-value=7e-16 Score=168.46 Aligned_cols=218 Identities=18% Similarity=0.105 Sum_probs=138.1
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCC---cCCccccHHHHHHHHhcCeEEEEEeccc-CCCCCchhhhccccccCC
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGV---SVLPTFSISRCMFLRHFNGIYAIPNIRG-GGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG-~~~~g~~~~~~~~~~~~~ 546 (734)
.+.+.++.|+.. .++.|+||++|||... .....+.. ..++.+.|++|+.+|||. ..+|+..-... ....+.
T Consensus 82 cL~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~--~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~~~n 156 (489)
T 1qe3_A 82 CLYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAYSDN 156 (489)
T ss_dssp CCEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCC--HHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTSCSC
T ss_pred CCEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCH--HHHHhcCCEEEEecCccCcccccCcccccc-ccCCCC
Confidence 467778888752 3458999999998632 22222332 233343359999999994 32343210000 012233
Q ss_pred CchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcchhcccccc-ccCcccccc
Q psy4818 547 NCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKF-TIAYYSESE 620 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~-~~~~~~~~~ 620 (734)
..+.|+.++++|+.++. ..||+||.|+|+|+||++++.++... +++|+++|+.+|..++...... .....+...
T Consensus 157 ~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~ 236 (489)
T 1qe3_A 157 LGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQV 236 (489)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 45789999999998752 36999999999999999999988753 5799999999998744322110 000111112
Q ss_pred cCCCC-CHHH------HHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEE
Q psy4818 621 FGSPN-NKTH------FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL 693 (734)
Q Consensus 621 ~g~~~-~~~~------~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 693 (734)
.|.+. ..+. -+.+...+++.+... ...| .+++++..|.+|.+.++.+++++++.. ++|+.+
T Consensus 237 ~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~----~~~~-~~~~~p~~D~~~~~~~~~~~~~~~~~~-------~vp~~~ 304 (489)
T 1qe3_A 237 LGINESQLDRLHTVAAEDLLKAADQLRIAEK----ENIF-QLFFQPALDPKTLPEEPEKSIAEGAAS-------GIPLLI 304 (489)
T ss_dssp HTCCTTCGGGGGTSCHHHHHHHHHHHHTSTT----CCTT-SCSSCCBCBTTTBCSCHHHHHHTTTTT-------TCCEEE
T ss_pred cCCCHHHHHHHHcCCHHHHHHHHHHhhhccc----cccC-CccceEeECCeecCcCHHHHHhcCCCC-------CCCEEE
Confidence 34331 1110 111222223221111 2223 678899999999999999998887766 899999
Q ss_pred EEeCCCCCCCCC
Q psy4818 694 RVEQDAGHGQGT 705 (734)
Q Consensus 694 ~~~~~~gH~~~~ 705 (734)
-.++++||.+..
T Consensus 305 g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 305 GTTRDEGYLFFT 316 (489)
T ss_dssp EEETTGGGGTCC
T ss_pred eeecchhHhhcc
Confidence 999999998864
No 167
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.56 E-value=3.9e-15 Score=150.58 Aligned_cols=233 Identities=13% Similarity=0.081 Sum_probs=133.4
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
++..++..+| ++.... . .++.|+||++||..+... .|......++. +||.|+++|+||.|......
T Consensus 4 ~~~~~~~~~~-~~~~~~---~----~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~--- 69 (279)
T 4g9e_A 4 NYHELETSHG-RIAVRE---S----EGEGAPLLMIHGNSSSGA--IFAPQLEGEIG-KKWRVIAPDLPGHGKSTDAI--- 69 (279)
T ss_dssp EEEEEEETTE-EEEEEE---C----CCCEEEEEEECCTTCCGG--GGHHHHHSHHH-HHEEEEEECCTTSTTSCCCS---
T ss_pred EEEEEEcCCc-eEEEEe---c----CCCCCeEEEECCCCCchh--HHHHHHhHHHh-cCCeEEeecCCCCCCCCCCC---
Confidence 4455666555 343321 1 245688999999866543 34443333355 59999999999966543210
Q ss_pred cccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----ccc---
Q psy4818 540 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----KFT--- 612 (734)
Q Consensus 540 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~~~--- 612 (734)
.......++++.+.+..+++. .+.+++.++|||+||++++.++.++|++.+.+++..|........ ...
T Consensus 70 --~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T 4g9e_A 70 --DPDRSYSMEGYADAMTEVMQQ--LGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMA 145 (279)
T ss_dssp --CHHHHSSHHHHHHHHHHHHHH--HTCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGG
T ss_pred --CcccCCCHHHHHHHHHHHHHH--hCCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhh
Confidence 011223566776666666554 244589999999999999999999999555555555543221100 000
Q ss_pred --cCcc--------ccc-ccCCCCCHHHHHHHHhCCc------------------cCCCCCCCCCccCCcEEEEecCCCC
Q psy4818 613 --IAYY--------SES-EFGSPNNKTHFHNLLSYSP------------------LHNIKVPPNNTQYPATLVLTGDHDD 663 (734)
Q Consensus 613 --~~~~--------~~~-~~g~~~~~~~~~~~~~~sp------------------~~~~~~p~~~~~~P~~Li~~g~~D~ 663 (734)
.... +.. .+..+........+....+ ...+.. ++.| +|+++|++|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~ 220 (279)
T 4g9e_A 146 LAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAE----AQLP-IAVVNGRDEP 220 (279)
T ss_dssp GGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHH----CCSC-EEEEEETTCS
T ss_pred hcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHh----cCCC-EEEEEcCCCc
Confidence 0000 000 0122222222111111111 001121 5666 9999999999
Q ss_pred CCCChHHHHHH-HHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCC
Q psy4818 664 RVPPLHSYKFI-ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 664 ~v~~~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
.|++..+.++. +.+. .+++++++++||....... .+....+.+||.+.-...
T Consensus 221 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~~~~ 273 (279)
T 4g9e_A 221 FVELDFVSKVKFGNLW-----------EGKTHVIDNAGHAPFREAP--AEFDAYLARFIRDCTQLE 273 (279)
T ss_dssp SBCHHHHTTCCCSSBG-----------GGSCEEETTCCSCHHHHSH--HHHHHHHHHHHHHHHSSC
T ss_pred ccchHHHHHHhhccCC-----------CCeEEEECCCCcchHHhCH--HHHHHHHHHHHHHhhhhh
Confidence 99988766655 3222 2367889999998643222 456667889998876543
No 168
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.56 E-value=2.6e-14 Score=145.12 Aligned_cols=203 Identities=15% Similarity=0.078 Sum_probs=120.1
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCC
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 568 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 568 (734)
|.||++||..+... .|.. ....|+++||.|+++|+||.|..... .....++++.+.+..+++. .+.+
T Consensus 24 ~pvvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~dl~~~l~~--l~~~ 90 (279)
T 1hkh_A 24 QPVVLIHGYPLDGH--SWER-QTRELLAQGYRVITYDRRGFGGSSKV--------NTGYDYDTFAADLHTVLET--LDLR 90 (279)
T ss_dssp EEEEEECCTTCCGG--GGHH-HHHHHHHTTEEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHH--HTCC
T ss_pred CcEEEEcCCCchhh--HHhh-hHHHHHhCCcEEEEeCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cCCC
Confidence 45899999766543 3444 34566667999999999996654311 1223455555555544443 2346
Q ss_pred cEEEEEcChHHHHHHHHHhcCCC-ceeEEEEcCCcchhcccccc-ccC--c---------------cccc-----cc---
Q psy4818 569 YITIMGGSNGGLLVGACLNQRPE-LYGAALILVGALDMLRFNKF-TIA--Y---------------YSES-----EF--- 621 (734)
Q Consensus 569 ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~d~~~~~~~-~~~--~---------------~~~~-----~~--- 621 (734)
++.++|||+||.+++.++.++|+ +++++|+.+++......... ..+ . .+.. .+
T Consensus 91 ~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (279)
T 1hkh_A 91 DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLD 170 (279)
T ss_dssp SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHH
T ss_pred ceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcc
Confidence 89999999999999999999998 99999988774321100000 000 0 0000 00
Q ss_pred ---CCCCCHHHHHHHH----hCCc--------------cCCCCCCCCCc---cCCcEEEEecCCCCCCCChHH-HHHHHH
Q psy4818 622 ---GSPNNKTHFHNLL----SYSP--------------LHNIKVPPNNT---QYPATLVLTGDHDDRVPPLHS-YKFIAT 676 (734)
Q Consensus 622 ---g~~~~~~~~~~~~----~~sp--------------~~~~~~p~~~~---~~P~~Li~~g~~D~~v~~~~~-~~~~~~ 676 (734)
+.....+....+. ..++ ...+.. + ++| +|+++|++|..+|+..+ ..+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~ 245 (279)
T 1hkh_A 171 ENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEA----VRAAGKP-TLILHGTKDNILPIDATARRFHQA 245 (279)
T ss_dssp HHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHH----HHHHCCC-EEEEEETTCSSSCTTTTHHHHHHH
T ss_pred cCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHH----hccCCCC-EEEEEcCCCccCChHHHHHHHHHh
Confidence 1111111111100 0000 001111 4 667 99999999999999887 666554
Q ss_pred HHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 677 LQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 677 L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
+.. .++++++++||...... ..+..+.+.+||.
T Consensus 246 ~~~-----------~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 246 VPE-----------ADYVEVEGAPHGLLWTH--ADEVNAALKTFLA 278 (279)
T ss_dssp CTT-----------SEEEEETTCCTTHHHHT--HHHHHHHHHHHHH
T ss_pred CCC-----------eeEEEeCCCCccchhcC--HHHHHHHHHHHhh
Confidence 432 37889999999874322 2355666777875
No 169
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.56 E-value=1.4e-14 Score=154.16 Aligned_cols=220 Identities=16% Similarity=0.127 Sum_probs=131.6
Q ss_pred CcEEEEecCCCCCcCCc-------cccHHHH--HHHHhcCeEEEEEeccc-CCCC-Cchhhhc--cc---cccCCCchhH
Q psy4818 488 NPVIIYGYGGYGVSVLP-------TFSISRC--MFLRHFNGIYAIPNIRG-GGEL-GEDWHNA--GR---LLKKQNCFDD 551 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~-------~~~~~~~--~~l~~~G~~v~~~~~rG-~~~~-g~~~~~~--~~---~~~~~~~~~D 551 (734)
.|+||++||..+..... .|..... ..|+++||.|+++|+|| .|+. +..-... +. .......++|
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 68999999987665540 1332211 13545699999999999 3432 2110000 00 0011356788
Q ss_pred HHHHHHHHHHcCCCCCCcEE-EEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc----c-------c-c---ccc--
Q psy4818 552 FQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR----F-------N-K---FTI-- 613 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~----~-------~-~---~~~-- 613 (734)
+.+.+..+++. .+.+++. |+|+|+||.+++.++.++|++++++|+.+|...... . . . +..
T Consensus 139 ~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T 2b61_A 139 IVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGD 216 (377)
T ss_dssp HHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGC
T ss_pred HHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccc
Confidence 88888877765 3456887 999999999999999999999999999888532110 0 0 0 000
Q ss_pred -----------------------C-cccccccCCC-----------CCHHHH---------------------HHHHhCC
Q psy4818 614 -----------------------A-YYSESEFGSP-----------NNKTHF---------------------HNLLSYS 637 (734)
Q Consensus 614 -----------------------~-~~~~~~~g~~-----------~~~~~~---------------------~~~~~~s 637 (734)
. ..+...+... ...+.+ ..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T 2b61_A 217 YYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYD 296 (377)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCC
T ss_pred hhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccc
Confidence 0 0000001000 000000 1111111
Q ss_pred c-------cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC-CCCCCCCCchHH
Q psy4818 638 P-------LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ-DAGHGQGTPLMK 709 (734)
Q Consensus 638 p-------~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~ 709 (734)
+ ...+.. +++| +||++|++|..+|+.+..+..+.+.+. ...+++++++ ++||.......
T Consensus 297 ~~~~~~~~~~~l~~----i~~P-vlii~G~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~i~~~~gH~~~~e~p- 363 (377)
T 2b61_A 297 PSLGYENVKEALSR----IKAR-YTLVSVTTDQLFKPIDLYKSKQLLEQS-------GVDLHFYEFPSDYGHDAFLVDY- 363 (377)
T ss_dssp TTTTSSCHHHHHTT----CCSE-EEEEEETTCSSSCHHHHHHHHHHHHHT-------TCEEEEEEECCTTGGGHHHHCH-
T ss_pred cccccchHHhhhhh----cCCC-EEEEecCCcccCCccchHHHHHHHHhc-------CCCceEEEeCCCCCchhhhcCH-
Confidence 1 111222 6677 999999999999997776777777766 4557899999 99998653322
Q ss_pred hHHHHHHHHHHHHH
Q psy4818 710 SIEEMTDIYVFLMK 723 (734)
Q Consensus 710 ~~~~~~~~~~fl~~ 723 (734)
.+....+.+||.+
T Consensus 364 -~~~~~~i~~fl~~ 376 (377)
T 2b61_A 364 -DQFEKRIRDGLAG 376 (377)
T ss_dssp -HHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHhc
Confidence 3556667888864
No 170
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.56 E-value=2.2e-14 Score=146.44 Aligned_cols=208 Identities=13% Similarity=0.055 Sum_probs=124.8
Q ss_pred CcEEEEecCC-CCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 488 NPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 488 ~P~vv~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
.|.||++||. ++......|.......|++ +|.|+++|+||.|.... . ......++++.+.+..++++ .+
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~-~~~vi~~D~~G~G~S~~---~----~~~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDA-GYRVILKDSPGFNKSDA---V----VMDEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHT-TCEEEEECCTTSTTSCC---C----CCSSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhc-cCEEEEECCCCCCCCCC---C----CCcCcCHHHHHHHHHHHHHH--hC
Confidence 4789999997 3333223344333155665 69999999999664321 1 11134567777666666554 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-c--c---------cccCcc------ccccc-CCC--C
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-N--K---------FTIAYY------SESEF-GSP--N 625 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-~--~---------~~~~~~------~~~~~-g~~--~ 625 (734)
.+++.|+|||+||.+++.++.++|++++++|+..|....... . . ...... +...+ ..+ .
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 468999999999999999999999999999988775421100 0 0 000000 00000 011 0
Q ss_pred CHHH--------------HHHHHh---------CCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 626 NKTH--------------FHNLLS---------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 626 ~~~~--------------~~~~~~---------~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
..+. ...+.. ......+.. +++| +||++|++|..+|+..+.++.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~---- 253 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGE----IKAK-TFITWGRDDRFVPLDHGLKLLWNID---- 253 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHSS----
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhh----cCCC-EEEEEECCCCccCHHHHHHHHHHCC----
Confidence 0110 011100 111122332 6777 9999999999999988877766553
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
..++++++++||....... .+....+.+||.+
T Consensus 254 -------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 285 (286)
T 2puj_A 254 -------DARLHVFSKCGAWAQWEHA--DEFNRLVIDFLRH 285 (286)
T ss_dssp -------SEEEEEESSCCSCHHHHTH--HHHHHHHHHHHHH
T ss_pred -------CCeEEEeCCCCCCccccCH--HHHHHHHHHHHhc
Confidence 2478899999997643222 3556667788864
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=7.8e-13 Score=153.10 Aligned_cols=260 Identities=11% Similarity=0.061 Sum_probs=166.0
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC---------
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG--------- 164 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g--------- 164 (734)
..++|||.+++|...+++.....||+++..+++...++... ..+.+++|||||+.|+|+....+
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-------cccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 45668999999999988777778999987766644332211 11457999999999999987654
Q ss_pred --CceEEEEEEECCCCCcccc---cc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC---
Q psy4818 165 --SDWNTLHIKDVDTGKDYPE---VL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT--- 234 (734)
Q Consensus 165 --~~~~~l~v~dl~~g~~~~~---~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t--- 234 (734)
....+||++++.+++.... .. ......++.|||||++|++...... .....||++++.+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC-----------DPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS-----------SSCCEEEEEEGGGSSS
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC-----------CCccEEEEEECccccc
Confidence 2246799999998863211 11 1112357899999999999886331 1145899999976
Q ss_pred ---CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc-eEE-E
Q psy4818 235 ---EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHE-I 309 (734)
Q Consensus 235 ---~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~-~~~-~ 309 (734)
+......+.... +. . ...|+|||++|+|..+.......|+++|++++.. ..++.++..... ... +
T Consensus 272 ~~~~~~~~~~l~~~~-~~-~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~------~~~~~l~~~~~~~~~~~~ 341 (710)
T 2xdw_A 272 GITGILKWVKLIDNF-EG-E--YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE------SKWKVLVPEHEKDVLEWV 341 (710)
T ss_dssp SSCSSCCCEEEECSS-SS-C--EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG------GGCEEEECCCSSCEEEEE
T ss_pred ccCCccceEEeeCCC-Cc-E--EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc------ccceeccCCCCCCeEEEE
Confidence 422233333322 22 1 2368999999999887654457899999987310 124556654332 222 2
Q ss_pred -EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCC-ceeEEEEECCCC
Q psy4818 310 -IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNV-RSVMDLHDLNTG 386 (734)
Q Consensus 310 -~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~~~l~~~dl~~g 386 (734)
|+ +++.+++....++ ..+|+++++.+++. ...+..+ ...+..+.+. +++.+++.+.... ...++++|+.+|
T Consensus 342 ~~~-~~~~lv~~~~~~g-~~~l~~~~~~~g~~--~~~l~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 342 ACV-RSNFLVLCYLHDV-KNTLQLHDLATGAL--LKIFPLE--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEE-TTTEEEEEEEETT-EEEEEEEETTTCCE--EEEECCC--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EEE-cCCEEEEEEEECC-EEEEEEEECCCCCE--EEecCCC--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 55 4677777766544 45799999855431 2333322 2334444333 3456777765443 458999999877
Q ss_pred c
Q psy4818 387 K 387 (734)
Q Consensus 387 ~ 387 (734)
+
T Consensus 416 ~ 416 (710)
T 2xdw_A 416 E 416 (710)
T ss_dssp S
T ss_pred c
Confidence 7
No 172
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.55 E-value=1.6e-13 Score=155.17 Aligned_cols=240 Identities=8% Similarity=-0.058 Sum_probs=151.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..+++||||++|||+...+|. ..||. +++|+..+.+... .....++|||| +++|++.... ..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~--~~lw~--~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~----------g~ 87 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGS--VNAYL--YDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSK----------GA 87 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTE--EEEEE--EETTEEEECCSSCCSEECEECTTCS--EEEEEEECST----------TS
T ss_pred hheeecCCCCCeEEEEEccCCc--eeEEE--EcCCCcEeeecccccccccccCCCC--eEEEEeccCC----------CC
Confidence 6788999999999999876553 44554 5677765544433 23468999999 6788775310 12
Q ss_pred CCcEEEEEEC--CCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 223 MGQKIYYHVL--GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 223 ~~~~l~~~~l--~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
...+||.+++ .+... .+.. .. . . ...+|||||+.+++.+... ..+.+||++++ ....+.
T Consensus 88 ~~~~l~~~~~~~~g~~~---~l~~-~~-~-~-~~~~~s~dg~~~~~~s~~~---~~~~l~d~~~g---------~~~~l~ 148 (582)
T 3o4h_A 88 EQHALFKVNTSRPGEEQ---RLEA-VK-P-M-RILSGVDTGEAVVFTGATE---DRVALYALDGG---------GLRELA 148 (582)
T ss_dssp CCEEEEEEETTSTTCCE---ECTT-SC-S-B-EEEEEEECSSCEEEEEECS---SCEEEEEEETT---------EEEEEE
T ss_pred cceEEEEEeccCCCccc---cccC-CC-C-c-eeeeeCCCCCeEEEEecCC---CCceEEEccCC---------cEEEee
Confidence 2347888888 43321 1111 11 1 2 2469999999988876543 23447788773 223343
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
.... ....|||||+.|++.++..+....|+++|+++++ ++.++.+. .. .....+..+++.++....++..+|++
T Consensus 149 ~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---~~~l~~~~-~~-~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 149 RLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---LRVFDSGE-GS-FSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp EESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---CEEECCSS-CE-EEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred cCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---ceEeecCC-Cc-cccceECCCCCEEEEccCCCeeEEEE
Confidence 3222 2224999999999888765554679999998876 46665443 33 34444544455444666666679999
Q ss_pred EECCCCceeeeeCCCCceEEeec--------cCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHIS--------GRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~--------~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
||+++|+.. .++...+.+..+. ++||+ .++++.+... .+.++++
T Consensus 223 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g---~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG---RSAVFID 274 (582)
T ss_dssp ECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT---EEEEEET
T ss_pred EcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC---cEEEEEE
Confidence 999877764 5544344444455 88999 7777665433 4566665
No 173
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.55 E-value=1.6e-14 Score=157.32 Aligned_cols=139 Identities=11% Similarity=0.021 Sum_probs=86.5
Q ss_pred EEEcCCCcEEeEEEEEeccccC--CCCCcEEEEecCCCCCcCCcc-ccHHHH--HHHHhcCeEEEEEecccCCCCCchhh
Q psy4818 463 YFRSKDGTRVPMYIIHRVGALR--NRRNPVIIYGYGGYGVSVLPT-FSISRC--MFLRHFNGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 463 ~~~s~dg~~i~~~~~~p~~~~~--~~~~P~vv~~hGg~~~~~~~~-~~~~~~--~~l~~~G~~v~~~~~rG~~~~g~~~~ 537 (734)
.+...+|..+.+.-+.-..... ....|+||++||..+...... |..... ..|.+.||.|+++|+||++ +|..-.
T Consensus 82 ~~~~~~g~~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~-~G~S~~ 160 (444)
T 2vat_A 82 LFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSP-FGSAGP 160 (444)
T ss_dssp EEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCS-SSSSST
T ss_pred CeecCCCCEecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCC-CCCCCC
Confidence 3445566666553332221111 123589999999877665411 332211 1353569999999999952 222111
Q ss_pred hc-----cc-----cccCCCchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 538 NA-----GR-----LLKKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 538 ~~-----~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
.. +. .......++|+.+.+..+++. ...++ ++++|||+||++++.++.++|++++++|+.++...
T Consensus 161 ~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 161 CSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp TSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred CCCCcccccccccccccccccHHHHHHHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 00 00 001134677887777776665 33457 99999999999999999999999999999887643
No 174
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.55 E-value=2.5e-14 Score=146.75 Aligned_cols=227 Identities=16% Similarity=0.126 Sum_probs=131.2
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCC-CCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY-GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 545 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~ 545 (734)
.+|.++.... . +..|.||++||.. +......|... ...|++ +|.|+++|+||.|... . ...
T Consensus 23 ~~g~~l~y~~---~-----g~g~~vvllHG~~~~~~~~~~~~~~-~~~L~~-~~~vi~~Dl~G~G~S~----~----~~~ 84 (296)
T 1j1i_A 23 AGGVETRYLE---A-----GKGQPVILIHGGGAGAESEGNWRNV-IPILAR-HYRVIAMDMLGFGKTA----K----PDI 84 (296)
T ss_dssp ETTEEEEEEE---E-----CCSSEEEEECCCSTTCCHHHHHTTT-HHHHTT-TSEEEEECCTTSTTSC----C----CSS
T ss_pred ECCEEEEEEe---c-----CCCCeEEEECCCCCCcchHHHHHHH-HHHHhh-cCEEEEECCCCCCCCC----C----CCC
Confidence 3777665432 1 2246799999963 32222234332 355665 6999999999965432 1 111
Q ss_pred CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-cc----cCcc----
Q psy4818 546 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-FT----IAYY---- 616 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-~~----~~~~---- 616 (734)
..+++++.+.+..+++.-.+ .+++.|+|+|+||.+++.++.++|++++++|+..|......... .. ....
T Consensus 85 ~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (296)
T 1j1i_A 85 EYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGM 163 (296)
T ss_dssp CCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHH
Confidence 24566666666555554222 16899999999999999999999999999998877542110000 00 0000
Q ss_pred --cccc-cCCCC--CHHH----------------HHHHH-h-------CCccCCCCCCCCCccCCcEEEEecCCCCCCCC
Q psy4818 617 --SESE-FGSPN--NKTH----------------FHNLL-S-------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 667 (734)
Q Consensus 617 --~~~~-~g~~~--~~~~----------------~~~~~-~-------~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~ 667 (734)
.... ...+. ..+. +..+. . ......+.. +++| +||++|++|..+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~~~~ 238 (296)
T 1j1i_A 164 VHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK----VQVP-TLVVQGKDDKVVPV 238 (296)
T ss_dssp HHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTT----CCSC-EEEEEETTCSSSCH
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhc----CCCC-EEEEEECCCcccCH
Confidence 0000 01111 1110 00000 0 000011222 6777 99999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCCC
Q psy4818 668 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKYY 730 (734)
Q Consensus 668 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 730 (734)
..+.++.+.+. ..++++++++||....... .+....+.+||.++++...+
T Consensus 239 ~~~~~~~~~~~-----------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~~~~~~ 288 (296)
T 1j1i_A 239 ETAYKFLDLID-----------DSWGYIIPHCGHWAMIEHP--EDFANATLSFLSLRVDITPA 288 (296)
T ss_dssp HHHHHHHHHCT-----------TEEEEEESSCCSCHHHHSH--HHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHCC-----------CCEEEEECCCCCCchhcCH--HHHHHHHHHHHhccCCcCch
Confidence 88877766543 3478899999998643222 35666789999999877654
No 175
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.55 E-value=1.7e-14 Score=147.03 Aligned_cols=223 Identities=15% Similarity=0.088 Sum_probs=128.7
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCC-CCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 544 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~ 544 (734)
..+|.++..... + +...|+||++||. ++......|... ...|++ +|.|+++|+||.|.... .. .
T Consensus 13 ~~~g~~l~y~~~---g---~~g~p~vvllHG~~~~~~~~~~~~~~-~~~L~~-~~~vi~~D~~G~G~S~~---~~----~ 77 (285)
T 1c4x_A 13 PSGTLASHALVA---G---DPQSPAVVLLHGAGPGAHAASNWRPI-IPDLAE-NFFVVAPDLIGFGQSEY---PE----T 77 (285)
T ss_dssp CCTTSCEEEEEE---S---CTTSCEEEEECCCSTTCCHHHHHGGG-HHHHHT-TSEEEEECCTTSTTSCC---CS----S
T ss_pred EECCEEEEEEec---C---CCCCCEEEEEeCCCCCCcchhhHHHH-HHHHhh-CcEEEEecCCCCCCCCC---CC----C
Confidence 346766654432 1 0234779999996 333322334443 355665 69999999999664321 11 1
Q ss_pred CCCchhHH----HHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc--------cccc
Q psy4818 545 KQNCFDDF----QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--------NKFT 612 (734)
Q Consensus 545 ~~~~~~D~----~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--------~~~~ 612 (734)
....++++ ...+..+++. ...+++.++|||+||.+++.++.++|++++++|+.+|....... ....
T Consensus 78 ~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 155 (285)
T 1c4x_A 78 YPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFY 155 (285)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGG
T ss_pred cccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHh
Confidence 12345565 5555544443 23468999999999999999999999999999988875421100 0000
Q ss_pred cCcc------ccccc-CCCC-C---HHH-------------HHHHHh-----CC-------ccCCCCCCCCCccCCcEEE
Q psy4818 613 IAYY------SESEF-GSPN-N---KTH-------------FHNLLS-----YS-------PLHNIKVPPNNTQYPATLV 656 (734)
Q Consensus 613 ~~~~------~~~~~-g~~~-~---~~~-------------~~~~~~-----~s-------p~~~~~~p~~~~~~P~~Li 656 (734)
.... +...+ ..+. . .+. ...+.. .. ....+.. ++.| +|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~li 230 (285)
T 1c4x_A 156 ADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGR----LPHD-VLV 230 (285)
T ss_dssp GSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT----CCSC-EEE
T ss_pred ccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhcc----CCCC-EEE
Confidence 0000 00000 1111 0 010 010100 00 0011222 6777 999
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 657 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 657 ~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
++|++|..+|+..+.++++.+. ..++++++++||....... .+..+.+.+||.+
T Consensus 231 i~G~~D~~~p~~~~~~~~~~~~-----------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 231 FHGRQDRIVPLDTSLYLTKHLK-----------HAELVVLDRCGHWAQLERW--DAMGPMLMEHFRA 284 (285)
T ss_dssp EEETTCSSSCTHHHHHHHHHCS-----------SEEEEEESSCCSCHHHHSH--HHHHHHHHHHHHC
T ss_pred EEeCCCeeeCHHHHHHHHHhCC-----------CceEEEeCCCCcchhhcCH--HHHHHHHHHHHhc
Confidence 9999999999988877766543 3588999999998643222 3555667788753
No 176
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.55 E-value=1.4e-13 Score=142.12 Aligned_cols=124 Identities=16% Similarity=0.068 Sum_probs=83.7
Q ss_pred EEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcc
Q psy4818 461 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 540 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~ 540 (734)
...++..+|.++.....-+ ...|.||++||+++......+ ..++..+||.|+++|+||.|... ..
T Consensus 13 ~~~~~~~~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~~----~~~~~~~~~~vi~~D~~G~G~S~---~~-- 77 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDKM----RRFHDPAKYRIVLFDQRGSGRST---PH-- 77 (313)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGGG----GGGSCTTTEEEEEECCTTSTTSB---ST--
T ss_pred cceEEcCCCCEEEEEecCC------CCCCeEEEECCCCCccccHHH----HHhcCcCcceEEEECCCCCcCCC---CC--
Confidence 3445566888776544322 123568999998765432222 23343469999999999965432 11
Q ss_pred ccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 541 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 541 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.......++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 78 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 -ADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -TCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 111234567777766666665 23457999999999999999999999999999987664
No 177
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.54 E-value=1.1e-13 Score=131.71 Aligned_cols=173 Identities=13% Similarity=0.021 Sum_probs=117.5
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
++.|.||++||..+.... .|...+...+. .++ .++.+|.+ ...++++.+.+..+++. .
T Consensus 15 g~~~~vv~~HG~~~~~~~-~~~~~~~~~~~-~~~---~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~ 72 (191)
T 3bdv_A 15 SQQLTMVLVPGLRDSDDE-HWQSHWERRFP-HWQ---RIRQREWY---------------QADLDRWVLAIRRELSV--C 72 (191)
T ss_dssp HTTCEEEEECCTTCCCTT-SHHHHHHHHCT-TSE---ECCCSCCS---------------SCCHHHHHHHHHHHHHT--C
T ss_pred CCCceEEEECCCCCCchh-hHHHHHHHhcC-CeE---EEeccCCC---------------CcCHHHHHHHHHHHHHh--c
Confidence 456899999998755422 34333333333 243 44666621 23466777777776665 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 645 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p 645 (734)
+ +++.++|+|+||.+++.++.++|++++++|+.+|........ +.. .....
T Consensus 73 ~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--------------~~~-------------~~~~~- 123 (191)
T 3bdv_A 73 T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI--------------DDR-------------IQASP- 123 (191)
T ss_dssp S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC--------------TTT-------------SCSSC-
T ss_pred C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC--------------ccc-------------ccccc-
Confidence 3 789999999999999999999999999999999977543211 000 12222
Q ss_pred CCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchH-HhHHHHHHHHHHHHHH
Q psy4818 646 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLM-KSIEEMTDIYVFLMKS 724 (734)
Q Consensus 646 ~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 724 (734)
++.| +|+++|++|..||+.++.++++.+ .. ++++++++||....... ..-+....+.+||.+.
T Consensus 124 ---~~~P-~lii~g~~D~~~~~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 124 ---LSVP-TLTFASHNDPLMSFTRAQYWAQAW-DS-----------ELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp ---CSSC-EEEEECSSBTTBCHHHHHHHHHHH-TC-----------EEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred ---CCCC-EEEEecCCCCcCCHHHHHHHHHhc-CC-----------cEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 5566 999999999999999988888776 22 68899999998754210 1124446678888765
Q ss_pred c
Q psy4818 725 L 725 (734)
Q Consensus 725 l 725 (734)
.
T Consensus 188 ~ 188 (191)
T 3bdv_A 188 I 188 (191)
T ss_dssp C
T ss_pred c
Confidence 3
No 178
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=9.5e-13 Score=151.66 Aligned_cols=262 Identities=10% Similarity=0.086 Sum_probs=172.8
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCC--------Cc
Q psy4818 95 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG--------SD 166 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g--------~~ 166 (734)
.++|||.+++|.....+.+...|++++..+|+.....-.+ ....+++|| ||+.|+|+..... ..
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-------~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD-------VKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE-------EESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC-------ceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 4568999999999988888889999998777643321111 113578999 9999999987642 33
Q ss_pred eEEEEEEECCCCCccc----cccc--ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCe
Q psy4818 167 WNTLHIKDVDTGKDYP----EVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 240 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~----~~~~--~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~ 240 (734)
..+||++++.++.... .... ...+.++.|||||++|++..... ....+||++++.++..+-+
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------------~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS------------TSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS------------SSCCEEEEEETTSTTCCCE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC------------CCCcEEEEEECCCCCCceE
Confidence 4689999998875311 1111 12235789999999999987633 1235899999987654434
Q ss_pred eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEE
Q psy4818 241 PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVK 320 (734)
Q Consensus 241 ~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 320 (734)
.+....+ .. .. .|++||++|+|..+.......|+.+|++++.. ..|+.++....... .|++++++|++.
T Consensus 275 ~l~~~~~-~~--~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~------~~~~~l~~~~~~~~-~~s~~g~~lv~~ 343 (693)
T 3iuj_A 275 TVQGDLD-AD--VS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP------AHWRDLIPERQQVL-TVHSGSGYLFAE 343 (693)
T ss_dssp EEECSSS-SC--EE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG------GGCEEEECCCSSCE-EEEEETTEEEEE
T ss_pred EEeCCCC-ce--EE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc------cccEEEecCCCCEE-EEEEECCEEEEE
Confidence 4433322 21 12 28999999999887654457999999987321 23556665554445 799999999988
Q ss_pred eCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEe-CCceeEEEEECCCCceeeeeC
Q psy4818 321 TTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQ-NVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 321 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~l~~~dl~~g~~~~~l~ 393 (734)
..+++ ..+|++++++++. .+.+..+. ...+..+.. .+++.+++.+.. .....++.+|+++|+. +.+.
T Consensus 344 ~~~~g-~~~l~~~d~~g~~---~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~-~~l~ 412 (693)
T 3iuj_A 344 YMVDA-TARVEQFDYEGKR---VREVALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI-SLYR 412 (693)
T ss_dssp EEETT-EEEEEEECTTSCE---EEEECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE-EEEE
T ss_pred EEECC-eeEEEEEECCCCe---eEEeecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE-EEEE
Confidence 77654 4579999998654 23333222 223333322 244567776654 3446899999977764 4443
No 179
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.54 E-value=4.9e-14 Score=145.55 Aligned_cols=226 Identities=17% Similarity=0.081 Sum_probs=144.0
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEeccccC-CCCCcEEEEecCCCCCcCCccccHHHHHHHHh------cCeEEEEEecccC
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGALR-NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH------FNGIYAIPNIRGG 529 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~~-~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~rG~ 529 (734)
..+.+++.|. -|....++++.|+++.+ .+++|+|++.||..... . .......+.. .+++||.+++..
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~---~-~~~~~~~l~~~~~~~~~~~IvV~i~~~~- 85 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQFD---H-MASLLQFLSQGTMPQIPKVIIVGIHNTN- 85 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHHH---H-HHHHHHHHTCSSSCSSCCCEEEEECCSS-
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhhhH---H-HHHHHHHHHhhhhcCCCCEEEEEECCCC-
Confidence 4566677775 47789999999999865 67899999999952111 0 1123344442 267888887511
Q ss_pred CCCCchhhhc-------c------cc-ccCCCchhHHH--HHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCce
Q psy4818 530 GELGEDWHNA-------G------RL-LKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELY 593 (734)
Q Consensus 530 ~~~g~~~~~~-------~------~~-~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~ 593 (734)
...++... | .. ..+...+.+++ ..+.++.++..+++.| +|+|+|+||++++.++.++|++|
T Consensus 86 --R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F 162 (331)
T 3gff_A 86 --RMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLF 162 (331)
T ss_dssp --HHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSC
T ss_pred --cccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhh
Confidence 11111100 0 00 11223455554 3566666665567665 89999999999999999999999
Q ss_pred eEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCC-------CCC
Q psy4818 594 GAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDD-------RVP 666 (734)
Q Consensus 594 ~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~-------~v~ 666 (734)
+++++.+|.+.+. .. ...+.+... +..... ...| +++.+|+.|. +++
T Consensus 163 ~~~~~~S~~~w~~----------------~~---~~~~~~~~~--~~~~~~----~~~~-l~l~~G~~d~~~~~~~~~~~ 216 (331)
T 3gff_A 163 SAYLALDTSLWFD----------------SP---HYLTLLEER--VVKGDF----KQKQ-LFMAIANNPLSPGFGVSSYH 216 (331)
T ss_dssp SEEEEESCCTTTT----------------TT---HHHHHHHHH--HHHCCC----SSEE-EEEEECCCSEETTTEECCHH
T ss_pred heeeEeCchhcCC----------------hH---HHHHHHHHH--hhcccC----CCCe-EEEEeCCCCCCCccchHHHH
Confidence 9999999965321 11 111111110 000000 2233 9999999998 678
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcC
Q psy4818 667 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 667 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 726 (734)
..++.+++++|++. ...|.++.+.++|+++|+... .....+.+.||.....
T Consensus 217 ~~~~~~l~~~Lk~~----~~~g~~~~~~~~pg~~H~sv~-----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 217 KDLNLAFADKLTKL----APKGLGFMAKYYPEETHQSVS-----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HHHHHHHHHHHHHH----CCTTEEEEEEECTTCCTTTHH-----HHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHhc----cCCCceEEEEECCCCCccccH-----HHHHHHHHHHHHhhcC
Confidence 88899999999987 333678999999999998643 2334455666665443
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=1.8e-12 Score=135.87 Aligned_cols=236 Identities=12% Similarity=0.056 Sum_probs=147.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCC----CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKS----GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~----g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
..+..+++ ||++|||+.... +....+||++|+++|+.... . ....+.|||||+.|+|...+..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~--~~~~~~~SpDg~~la~~~~~~~------- 81 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI--E--NATMPRISPDGKKIAFMRANEE------- 81 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE--E--SCEEEEECTTSSEEEEEEEETT-------
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc--c--cCCCeEECCCCCEEEEEEeccC-------
Confidence 34678888 999999987532 22357899999999875443 2 2368999999999999986431
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC-----------------------CCC
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN-----------------------TQG 274 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~-----------------------~~~ 274 (734)
....+||++++.++.. +.+...+ . ...+.|||||++|++..... ...
T Consensus 82 ----~~~~~l~~~~~~~g~~--~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 82 ----KKVSEIWVADLETLSS--KKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp ----TTEEEEEEEETTTTEE--EEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred ----CCcceEEEEECCCCce--EEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 1234799999887542 2333332 2 56799999999999987431 012
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCC-----C-CceEEEEecCCCCCCCceEeec
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNA-----P-KGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~-----~-~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
..||++|+.++. ....+... ......|+||| ++|.++... . ..+|+.++ ++. ++.++.
T Consensus 152 ~~l~~~d~~~~~--------~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~ 215 (347)
T 2gop_A 152 TTFWIFDTESEE--------VIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK---EEKMFE 215 (347)
T ss_dssp EEEEEEETTTTE--------EEEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE---EEEEEE
T ss_pred ceEEEEECCCCe--------EEeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc---eEEecc
Confidence 689999998732 11233332 22223499998 666665432 1 55799999 443 455554
Q ss_pred CCCCceeEEEEEeeCCEEEEEEEeC-----CceeEEEEECCCCceeeeeCCC-CceEEe-eccCcccceEEEEEecCCCC
Q psy4818 349 EDENRTLDVVAAVANNKLIVHYIQN-----VRSVMDLHDLNTGKRLHSFPLD-LGQITH-ISGRRKYNEVFYGFTSFLQP 421 (734)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~l~~~dl~~g~~~~~l~~~-~g~v~~-~~~~~d~~~l~~~~ss~~~P 421 (734)
+ . .+... .++++.+++..... ....|+++| +|+. +.+... .+.+.. +.++ ++ +++..+... -
T Consensus 216 ~--~-~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~ 284 (347)
T 2gop_A 216 K--V-SFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-S 284 (347)
T ss_dssp E--E-SEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE--EEEEEEETT-E
T ss_pred C--c-ceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc--EEEEEecCC-c
Confidence 4 2 22233 45656777766543 135899998 5665 444433 455654 6677 65 555544332 2
Q ss_pred ceEEEEe
Q psy4818 422 GTIYHCN 428 (734)
Q Consensus 422 ~~~~~~d 428 (734)
..+| ++
T Consensus 285 ~~l~-~~ 290 (347)
T 2gop_A 285 VNLY-IW 290 (347)
T ss_dssp EEEE-EE
T ss_pred EEEE-Ec
Confidence 3455 54
No 181
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.53 E-value=1.2e-11 Score=125.98 Aligned_cols=265 Identities=11% Similarity=0.128 Sum_probs=173.8
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCC--------
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS-------- 165 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~-------- 165 (734)
.....+|+|+||..... ...||+++..+...+.|.+- ...-++|+|++|.|+....+.
T Consensus 19 g~~~~~g~~iy~~n~~d---~~~ly~~~~dg~~~~~l~~~-----------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 19 GLFCESDGEVFFSNTND---NGRLYAMNIDGSNIHKLSND-----------TAMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp TCEEEETTEEEEEEGGG---TTEEEEEETTSCSCEEEEEE-----------EEEEEEECSSEEEEEEECC------CCSS
T ss_pred eEEEEeCCEEEEEeCCC---CceEEEEcCCCCCCEEccCC-----------ceeeEEEcCCEEEEEECCCCcccccceec
Confidence 34568999999986543 24699999877777777662 234568999999999876542
Q ss_pred -ceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 166 -DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 166 -~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
....||.+++++++....... ....|+++|++|||+.... .....||++++++... ..|..
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~------------~~~~~Iy~~~~dGs~~--~~lt~ 146 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDT------------QTATSLYRIRIDGEEK--KKIKN 146 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESS------------SSCEEEEEEETTSCCC--EEEES
T ss_pred cCCCeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecC------------CCCceEEEEECCCCCe--EEEeC
Confidence 247899999999875433222 3458999999999987211 1234899999987543 23433
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCC
Q psy4818 245 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN 324 (734)
Q Consensus 245 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 324 (734)
... ..++++|++|+|+.. ....||+++++++ ..+.++.+ ....++.|+|++|||....+
T Consensus 147 ~~~-------~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~---------~~~~l~~~--~~~~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 147 HYL-------FTCNTSDRYFYYNNP---KNGQLYRYDTASQ---------SEALFYDC--NCYKPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp SCC-------CCSEEETTEEEEECT---TTCCEEEEETTTT---------EEEEEECS--CEEEEEEEETTEEEEEEGGG
T ss_pred CCc-------eEeeEECCEEEEEeC---CCceEEEEECCCC---------CEEEEeCC--CccceeeecCCEEEEEEcCC
Confidence 211 356899999998754 3468999999873 12333332 12234669999999976543
Q ss_pred CCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeecc
Q psy4818 325 APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 404 (734)
Q Consensus 325 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~ 404 (734)
+ .+|+++++++.. .+.|+. . .+.++. +.++.||++.... ...|+.+++ +|...++|... .+..+
T Consensus 206 ~--~~I~~~~ldG~~---~~~Lt~-~---~~~~~~-~~g~~Iy~~~~~~-~~~i~~~~~-DG~~r~~l~~~--~~~~i-- 269 (302)
T 3s25_A 206 D--NAIVHVNINNPN---PVVLTE-A---NIEHYN-VYGSLIFYQRGGD-NPALCVVKN-DGTGFKELAKG--EFCNI-- 269 (302)
T ss_dssp T--TEEEEECSSSCC---CEECSC-S---CEEEEE-EETTEEEEEECSS-SCEEEEEET-TSCCCEEEEES--CEEEE--
T ss_pred C--cEEEEEECCCCC---eEEEeC-C---CcceEE-ECCCEEEEEECCC-CcEEEEEEC-CCCccEEeeCC--ccceE--
Confidence 2 689999999876 244442 2 224444 3458888765443 378999999 67665666533 22233
Q ss_pred CcccceEEEEEecCCCCceEEEEeCC
Q psy4818 405 RRKYNEVFYGFTSFLQPGTIYHCNIP 430 (734)
Q Consensus 405 ~~d~~~l~~~~ss~~~P~~~~~~d~~ 430 (734)
+..++.++++- +.+. .+++.++.
T Consensus 270 ~i~~d~Iy~td--~~~~-~i~~~~~d 292 (302)
T 3s25_A 270 NVTSQYVYFTD--FVSN-KEYCTSTQ 292 (302)
T ss_dssp EECSSEEEEEE--TTTC-CEEEEESS
T ss_pred EEeCCEEEEEE--CCCC-eEEEEECC
Confidence 34566777653 3333 48888874
No 182
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.53 E-value=1.8e-14 Score=147.36 Aligned_cols=115 Identities=15% Similarity=0.088 Sum_probs=83.7
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++.....-+ ...|+||++||+.+.... |.. +...|+ +||.|+++|+||.|.... .....
T Consensus 18 ~g~~l~~~~~g~------~~~~~vl~lHG~~~~~~~--~~~-~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~~ 79 (299)
T 3g9x_A 18 LGERMHYVDVGP------RDGTPVLFLHGNPTSSYL--WRN-IIPHVA-PSHRCIAPDLIGMGKSDK--------PDLDY 79 (299)
T ss_dssp TTEEEEEEEESC------SSSCCEEEECCTTCCGGG--GTT-THHHHT-TTSCEEEECCTTSTTSCC--------CCCCC
T ss_pred CCeEEEEEecCC------CCCCEEEEECCCCccHHH--HHH-HHHHHc-cCCEEEeeCCCCCCCCCC--------CCCcc
Confidence 777776654422 235789999998765543 333 235566 499999999999654321 11245
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.++++.+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+.++.
T Consensus 80 ~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 132 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFI 132 (299)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEEC
T ss_pred cHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCC
Confidence 677877777777765 35568999999999999999999999999999987743
No 183
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.53 E-value=1.1e-13 Score=141.27 Aligned_cols=206 Identities=15% Similarity=0.099 Sum_probs=123.0
Q ss_pred cEEEEecCCC-CCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 489 PVIIYGYGGY-GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 489 P~vv~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
|.||++||.. +......|.......|.+ +|.|+++|+||.|..... ......++++.+.+..+++. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSV-------VNSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999963 222222344333256665 799999999996644311 11134577777776666665 344
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-c-------------cCc----ccccc-cCCCC--C
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-T-------------IAY----YSESE-FGSPN--N 626 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~-------------~~~----~~~~~-~g~~~--~ 626 (734)
+++.++|||+||.+++.++.++|++++++|+..|.......... . ... .+... +..+. .
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 68999999999999999999999999999988765421100000 0 000 00000 00110 0
Q ss_pred HHH--------------HHHHH-h--------CCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q psy4818 627 KTH--------------FHNLL-S--------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 683 (734)
Q Consensus 627 ~~~--------------~~~~~-~--------~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~ 683 (734)
.+. +..+. . ......+.. +++| +|+++|++|..+|+..+.++.+.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~---- 257 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAE----IKAQ-TLIVWGRNDRFVPMDAGLRLLSGIAG---- 257 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHSTT----
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhh----cCCC-eEEEeeCCCCccCHHHHHHHHhhCCC----
Confidence 111 11000 0 001112222 6777 99999999999999988877766543
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 684 LPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 684 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
.++++++++||....... .+..+.+.+||.
T Consensus 258 -------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 287 (289)
T 1u2e_A 258 -------SELHIFRDCGHWAQWEHA--DAFNQLVLNFLA 287 (289)
T ss_dssp -------CEEEEESSCCSCHHHHTH--HHHHHHHHHHHT
T ss_pred -------cEEEEeCCCCCchhhcCH--HHHHHHHHHHhc
Confidence 378889999998643222 344555677764
No 184
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=1.3e-12 Score=157.86 Aligned_cols=278 Identities=10% Similarity=-0.019 Sum_probs=173.1
Q ss_pred CCcE-EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEE-
Q psy4818 94 SAPQ-RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH- 171 (734)
Q Consensus 94 ~~p~-~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~- 171 (734)
..++ |+|.+++|.. . ..+++.+..++....+.. .....+..++|| ||++|+|..+ ...||
T Consensus 301 ~~~S~pdG~~la~~~--~----~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~ 362 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS--R----GQAFIQDVSGTYVLKVPE------PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLG 362 (1045)
T ss_dssp EEEEECGGGCEEEEE--T----TEEEEECTTSSBEEECSC------CSCEEEEEECSS-SEEEEEEEET-----TEEEEE
T ss_pred eeecCCCCCEEEEEE--c----CEEEEEcCCCCceEEccC------CCcceEEeeeEc-CCCeEEEEEC-----CCceEE
Confidence 3456 8888888876 1 246766655554333221 112357889999 9999999875 25899
Q ss_pred EEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCee
Q psy4818 172 IKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL 251 (734)
Q Consensus 172 v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~ 251 (734)
++|+++++....+........++|||||+.|++...+ ..|+++++.++.. +.+... +...
T Consensus 363 ~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~----------------~~v~~~d~~tg~~--~~~~~~--~~~~ 422 (1045)
T 1k32_A 363 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR----------------FEIMTVDLETGKP--TVIERS--REAM 422 (1045)
T ss_dssp EEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETT----------------SEEEEEETTTCCE--EEEEEC--SSSC
T ss_pred EEECCCCCceEecCCccceeeeEECCCCCEEEEECCC----------------CeEEEEECCCCce--EEeccC--CCCC
Confidence 9999988754444222334689999999999988642 2799999987642 233322 2223
Q ss_pred EEEEEEecCCcEEEEEEecC------CCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCC
Q psy4818 252 GLHSEVTDCGRYLLVSTSNN------TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKN 324 (734)
Q Consensus 252 ~~~~~~SpDG~~l~~~~~~~------~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~ 324 (734)
+..++|||||++|++..... .....|++||++++. ...+.......... |+|||+.|++.+++.
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---------~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---------IFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---------EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---------EEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 45789999999999887643 223689999998731 23333333333333 999999999998754
Q ss_pred CC--------------CceEEEEecCCCCCC-----------------------CceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 325 AP--------------KGKVVTINLNNPCEK-----------------------NWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 325 ~~--------------~~~l~~~d~~~~~~~-----------------------~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
.. ..+++.+.+...... ....+..+ ...+..+.+..++.++
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~--~~~~~~~~~s~dg~~~ 571 (1045)
T 1k32_A 494 LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD--PGDYRMIIPLESSILI 571 (1045)
T ss_dssp CCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC--CBCEEEEEECSSEEEE
T ss_pred CCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC--CCChhheEEcCCCeEE
Confidence 21 123444443311100 01111111 1234445555545555
Q ss_pred EE-----------EEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VH-----------YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~-----------~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+. ...+....|++||+.+++. +.+. ..+..+.+++|++.+++.... .+.++|+
T Consensus 572 ~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~---~~v~~~~~S~DG~~l~~~~~~-----~i~~~d~ 635 (1045)
T 1k32_A 572 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-TEVK---NNLTDLRLSADRKTVMVRKDD-----GKIYTFP 635 (1045)
T ss_dssp EECCCCCSHHHHHHCCCCCEEEEEEETTTCCE-EEEE---EEEEEEEECTTSCEEEEEETT-----SCEEEEE
T ss_pred EEecccCcccccccccCCCceEEEEECCCCcE-EEee---cCcceEEECCCCCEEEEEcCC-----cEEEEeC
Confidence 53 1223346899999988875 4443 345677889999988866433 4788888
No 185
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=9.1e-12 Score=130.62 Aligned_cols=269 Identities=11% Similarity=0.100 Sum_probs=161.3
Q ss_pred EEeCCeEEEEEEcCC--CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEE
Q psy4818 97 QRQENNYFYFHNKGL--QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 174 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~--~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~d 174 (734)
.++|+++|.....+. .....+++.+..++.....+.... ...++.|||||++++++.... ..|+++|
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~v~~~~~----~~v~~~d 117 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-------KPFGATINNTTQTLWFGNTVN----SAVTAID 117 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-------CCCSEEEETTTTEEEEEETTT----TEEEEEE
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-------CcceEEECCCCCEEEEEecCC----CEEEEEe
Confidence 356677765553321 012456666655554443333211 135689999999887766533 3799999
Q ss_pred CCCCCccccccc-cc---------ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe
Q psy4818 175 VDTGKDYPEVLK-NV---------KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 244 (734)
Q Consensus 175 l~~g~~~~~~~~-~~---------~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~ 244 (734)
+++++.+..... .. ....++|+|||+.|++..... ...|+++++.+... +..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------------~~~i~~~d~~~~~~--~~~~~ 181 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK--------------ESVIWVVDGGNIKL--KTAIQ 181 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS--------------SCEEEEEETTTTEE--EEEEC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC--------------CceEEEEcCCCCce--EEEec
Confidence 999986432211 10 124689999999887776321 23799999876532 12222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-c--ccc-eEE-EEEecCCeEEE
Q psy4818 245 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G--MDH-HHE-IIANNGPELIV 319 (734)
Q Consensus 245 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~--~~~-~~~-~~s~dg~~l~~ 319 (734)
... .....+.|+|||++|++... ...|+++|+.++. ....+.. . ... ... .|+|||+.+|+
T Consensus 182 ~~~--~~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 182 NTG--KMSTGLALDSEGKRLYTTNA----DGELITIDTADNK--------ILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp CCC--TTCCCCEEETTTTEEEEECT----TSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred CCC--CccceEEECCCCCEEEEEcC----CCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 111 12346799999999887532 3689999998731 1111111 1 111 112 39999998877
Q ss_pred EeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceE
Q psy4818 320 KTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQI 399 (734)
Q Consensus 320 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v 399 (734)
.... ...|+.+|+++++ ....++.... .......+++.+++....+ ..|.+||+.+++.+..+..+. ..
T Consensus 248 ~~~~---~~~v~~~d~~~~~---~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~-~~ 316 (353)
T 3vgz_A 248 TDSK---AAEVLVVDTRNGN---ILAKVAAPES--LAVLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPT-HP 316 (353)
T ss_dssp EESS---SSEEEEEETTTCC---EEEEEECSSC--CCEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCS-EE
T ss_pred EeCC---CCEEEEEECCCCc---EEEEEEcCCC--ceEEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCC-CC
Confidence 6532 3569999998765 2333332212 1222234445566654333 579999998898777776543 45
Q ss_pred EeeccCcccceEEEEEec
Q psy4818 400 THISGRRKYNEVFYGFTS 417 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss 417 (734)
..+.++++++.++++..+
T Consensus 317 ~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 317 NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEECTTSCEEEEEEEC
T ss_pred CeEEEcCCCCEEEEEEcc
Confidence 678888999888888766
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=1.2e-12 Score=151.14 Aligned_cols=251 Identities=12% Similarity=0.054 Sum_probs=159.8
Q ss_pred EeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-------cccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 148 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-------VKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 148 ~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.++|||++++|.....|.+...||+++..+|+....+..+ ....+++|||||+.|+|+....
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----------- 142 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----------- 142 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-----------
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-----------
Confidence 3459999999999988877789999998877643322111 1246899999999999998743
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCC---------CCceEEEEeCCCCCCCccc
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT---------QGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~i~~~d~~~~~~~~l~ 291 (734)
......|+++++.++........ +. . .+.+++|||||+.|++...+.. ...+||++++.++..
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~--~~-~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~---- 214 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVI--EG-G-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS---- 214 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCB--SC-C-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG----
T ss_pred CCceEEEEEEECCCCCCcCCccc--Cc-c-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch----
Confidence 12345899999988753200011 11 1 1146899999999999876543 136799999988321
Q ss_pred CCCCceeeeccc---cceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 292 GKFPLKTVIPGM---DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 292 ~~~~~~~l~~~~---~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
....+.... ..... .|||||++|++.++......+|+.++..++. ++.++.... .....+ +.+++ ++
T Consensus 215 ---~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~-~~~~~~-~~~g~-l~ 285 (695)
T 2bkl_A 215 ---KDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD---FRLLVKGVG-AKYEVH-AWKDR-FY 285 (695)
T ss_dssp ---GCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS---CEEEEECSS-CCEEEE-EETTE-EE
T ss_pred ---hceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc---eEEeecCCC-ceEEEE-ecCCc-EE
Confidence 111222211 11223 3999999999987654245679999876554 577776653 333333 35545 77
Q ss_pred EEEEeC-CceeEEEEECCCCce---eeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQN-VRSVMDLHDLNTGKR---LHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~-~~~~l~~~dl~~g~~---~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+....+ ....|+++|+++++. ...+... ...+.+++++ ++.+++++.... -.+++.+++
T Consensus 286 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg-~~~l~~~~~ 349 (695)
T 2bkl_A 286 VLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDA-TSEVRVATL 349 (695)
T ss_dssp EEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETT-EEEEEEEET
T ss_pred EEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECC-EEEEEEEeC
Confidence 666544 346899999976652 2333322 3445556655 456776665433 356888887
No 187
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.52 E-value=1.3e-13 Score=141.03 Aligned_cols=221 Identities=15% Similarity=0.102 Sum_probs=129.8
Q ss_pred CCC-cEEeEEEEEeccccCCCCCcEEEEecCC-CCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc
Q psy4818 467 KDG-TRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 544 (734)
Q Consensus 467 ~dg-~~i~~~~~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~ 544 (734)
.+| .++..... + +++.|.||++||. ++......|.... ..|++ .|.|+++|+||.|.... . ..
T Consensus 20 ~~g~~~l~y~~~---G---~g~~~~vvllHG~~pg~~~~~~w~~~~-~~L~~-~~~via~Dl~G~G~S~~---~----~~ 84 (291)
T 2wue_A 20 VDGPLKLHYHEA---G---VGNDQTVVLLHGGGPGAASWTNFSRNI-AVLAR-HFHVLAVDQPGYGHSDK---R----AE 84 (291)
T ss_dssp SSSEEEEEEEEE---C---TTCSSEEEEECCCCTTCCHHHHTTTTH-HHHTT-TSEEEEECCTTSTTSCC---C----SC
T ss_pred eCCcEEEEEEec---C---CCCCCcEEEECCCCCccchHHHHHHHH-HHHHh-cCEEEEECCCCCCCCCC---C----CC
Confidence 477 77765432 2 2344689999997 4333223344333 55665 69999999999664331 1 01
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-c-----------cc-
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-N-----------KF- 611 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-~-----------~~- 611 (734)
....++++.+.+..++++ ...+++.|+|||+||.+++.++.++|++++++|+..|....... . ..
T Consensus 85 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
T 2wue_A 85 HGQFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFS 162 (291)
T ss_dssp CSSHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHh
Confidence 134566666665555554 23468999999999999999999999999999988875321100 0 00
Q ss_pred ccCc-----cccccc-CCCC--C-------------HHHHHHHHh----C-C-----cc--CCCCCCCCCccCCcEEEEe
Q psy4818 612 TIAY-----YSESEF-GSPN--N-------------KTHFHNLLS----Y-S-----PL--HNIKVPPNNTQYPATLVLT 658 (734)
Q Consensus 612 ~~~~-----~~~~~~-g~~~--~-------------~~~~~~~~~----~-s-----p~--~~~~~p~~~~~~P~~Li~~ 658 (734)
.... .+...+ ..+. . ++.+..+.. + . +. ..+.. +++| +||++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lvi~ 237 (291)
T 2wue_A 163 VAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR----LRQP-VLLIW 237 (291)
T ss_dssp HSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG----CCSC-EEEEE
T ss_pred ccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh----CCCC-eEEEe
Confidence 0000 000000 0110 0 111111110 0 0 11 22332 7778 99999
Q ss_pred cCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 659 GDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 659 g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
|++|..+|+..+.++++.+. ..++++++++||....... .+..+.+.+||.
T Consensus 238 G~~D~~~~~~~~~~~~~~~p-----------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 288 (291)
T 2wue_A 238 GREDRVNPLDGALVALKTIP-----------RAQLHVFGQCGHWVQVEKF--DEFNKLTIEFLG 288 (291)
T ss_dssp ETTCSSSCGGGGHHHHHHST-----------TEEEEEESSCCSCHHHHTH--HHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHCC-----------CCeEEEeCCCCCChhhhCH--HHHHHHHHHHHh
Confidence 99999999988877766543 2478899999997643222 344555667764
No 188
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.52 E-value=3.5e-14 Score=148.14 Aligned_cols=202 Identities=11% Similarity=0.102 Sum_probs=122.4
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+||++||..+.... |. .++...||.|+++|+||.|... . .......++++.+.+..+++. .+.
T Consensus 81 ~~~vv~~hG~~~~~~~--~~----~~~~~lg~~Vi~~D~~G~G~S~---~----~~~~~~~~~~~a~dl~~~l~~--l~~ 145 (330)
T 3p2m_A 81 APRVIFLHGGGQNAHT--WD----TVIVGLGEPALAVDLPGHGHSA---W----REDGNYSPQLNSETLAPVLRE--LAP 145 (330)
T ss_dssp CCSEEEECCTTCCGGG--GH----HHHHHSCCCEEEECCTTSTTSC---C----CSSCBCCHHHHHHHHHHHHHH--SST
T ss_pred CCeEEEECCCCCccch--HH----HHHHHcCCeEEEEcCCCCCCCC---C----CCCCCCCHHHHHHHHHHHHHH--hCC
Confidence 5789999998665432 32 3444459999999999955332 1 112334567777766666654 345
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc----c--c-----cC-ccc--cc----cc--CCC-CC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----F--T-----IA-YYS--ES----EF--GSP-NN 626 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----~--~-----~~-~~~--~~----~~--g~~-~~ 626 (734)
+++.++|+|+||++++.++.++|++++++|+.+|......... . . .. ..+ .. .+ ..+ ..
T Consensus 146 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (330)
T 3p2m_A 146 GAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRD 225 (330)
T ss_dssp TCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSC
T ss_pred CCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCC
Confidence 6899999999999999999999999999999987644221100 0 0 00 000 00 00 000 11
Q ss_pred HHHHH-HHHhC-------------Ccc----------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 627 KTHFH-NLLSY-------------SPL----------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 627 ~~~~~-~~~~~-------------sp~----------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
.+.+. .+... ..+ ..+. .+++| +|+++|++|..|++..+.++.+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P-vLii~G~~D~~v~~~~~~~l~~~~~~--- 297 (330)
T 3p2m_A 226 VKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVD----ALSAP-ITLVRGGSSGFVTDQDTAELHRRATH--- 297 (330)
T ss_dssp HHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHH----HCCSC-EEEEEETTCCSSCHHHHHHHHHHCSS---
T ss_pred HHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHh----hCCCC-EEEEEeCCCCCCCHHHHHHHHHhCCC---
Confidence 11111 11100 000 0111 25667 99999999999998888777665532
Q ss_pred CCCCCCCcEE-EEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 683 SLPYQKNPLL-LRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 683 ~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
.+ +++++++||....... .+....+.+||.
T Consensus 298 --------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 328 (330)
T 3p2m_A 298 --------FRGVHIVEKSGHSVQSDQP--RALIEIVRGVLD 328 (330)
T ss_dssp --------EEEEEEETTCCSCHHHHCH--HHHHHHHHHHTT
T ss_pred --------CeeEEEeCCCCCCcchhCH--HHHHHHHHHHHh
Confidence 36 8899999998743222 345555677764
No 189
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=3.1e-12 Score=130.02 Aligned_cols=227 Identities=8% Similarity=-0.025 Sum_probs=147.4
Q ss_pred ceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC-CCCCCeeEEe
Q psy4818 166 DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-EQDKDIPVVE 244 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t-~~~~~~~v~~ 244 (734)
...+|++||+.+++.............++|||||+.|++.. + ..|+++++.+ +... .+..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~----------------~~i~~~d~~~~~~~~--~~~~ 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-E----------------GLLYRLSLAGDPSPE--KVDT 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-T----------------TEEEEEESSSCCSCE--ECCC
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-C----------------CeEEEEeCCCCCCce--Eecc
Confidence 45789999999988654333333346899999999999865 1 1799999987 5432 2222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCC
Q psy4818 245 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTK 323 (734)
Q Consensus 245 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~ 323 (734)
.. .......+.|||||++|++..........||.+++.++. ...+..... ... .|+|||+.|++....
T Consensus 81 ~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~-~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 81 GF-ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---------PRLMTKNLP-SYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp TT-CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---------CEECCSSSS-EEEEEECTTSSEEEEEEEE
T ss_pred cc-ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---------eEEeecCCC-ccceEECCCCCEEEEEECC
Confidence 21 112345689999999999877543345799999988732 122222222 222 499999999887654
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEee
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 402 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~ 402 (734)
++ ..+|+.+++.++. ...+.... ..+..+.+. +++.+++....++...|+.+++. ++..+.+......+..+
T Consensus 150 ~~-~~~l~~~~~~~~~---~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~ 222 (297)
T 2ojh_A 150 DQ-VFDIYSMDIDSGV---ETRLTHGE--GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD-GSSVERITDSAYGDWFP 222 (297)
T ss_dssp TT-EEEEEEEETTTCC---EEECCCSS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-SSCEEECCCCSEEEEEE
T ss_pred CC-ceEEEEEECCCCc---ceEcccCC--CccccceECCCCCEEEEEecCCCCccEEEECCC-CCCcEEEecCCcccCCe
Confidence 43 3568888887654 34443332 334445554 43456666655677788888874 44446666555667778
Q ss_pred ccCcccceEEEEEecCC-------CCceEEEEeC
Q psy4818 403 SGRRKYNEVFYGFTSFL-------QPGTIYHCNI 429 (734)
Q Consensus 403 ~~~~d~~~l~~~~ss~~-------~P~~~~~~d~ 429 (734)
.++++++.+++...... ....++.+|+
T Consensus 223 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 223 HPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp EECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred EECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 88999988877655432 2256999999
No 190
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.51 E-value=1.2e-13 Score=144.13 Aligned_cols=125 Identities=12% Similarity=0.022 Sum_probs=78.4
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++.....-+++- +.+.+.||++||+++.... |...+..+..+.||.|+++|.||.|.... ... ......
T Consensus 36 ~g~~l~y~~~G~~~~--~~~g~plvllHG~~~~~~~--w~~~~~~l~~~~~~~Via~D~rG~G~S~~---~~~-~~~~~~ 107 (330)
T 3nwo_A 36 GDHETWVQVTTPENA--QPHALPLIVLHGGPGMAHN--YVANIAALADETGRTVIHYDQVGCGNSTH---LPD-APADFW 107 (330)
T ss_dssp TTEEEEEEEECCSSC--CTTCCCEEEECCTTTCCSG--GGGGGGGHHHHHTCCEEEECCTTSTTSCC---CTT-SCGGGC
T ss_pred cCcEEEEEEecCccC--CCCCCcEEEECCCCCCchh--HHHHHHHhccccCcEEEEECCCCCCCCCC---CCC-Cccccc
Confidence 688887776655321 1112357888998776543 33333333332599999999999664431 000 001112
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
+++++.+.+..+++. ...+++.|+|||+||++++.++.++|++++++|+..+.
T Consensus 108 ~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~ 160 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSP 160 (330)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCC
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCC
Confidence 344444444444433 13357999999999999999999999999998876654
No 191
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.51 E-value=3.5e-14 Score=144.59 Aligned_cols=219 Identities=16% Similarity=0.095 Sum_probs=128.6
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCC-CcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYG-VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
+|.++..... +..|.||++||... ......|.... ..|+ .||.|+++|+||.|.... .. ...
T Consensus 13 ~g~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~-~~L~-~~~~vi~~Dl~G~G~S~~---~~----~~~ 75 (282)
T 1iup_A 13 AGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTI-PALS-KFYRVIAPDMVGFGFTDR---PE----NYN 75 (282)
T ss_dssp TTEEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTTH-HHHT-TTSEEEEECCTTSTTSCC---CT----TCC
T ss_pred CCEEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHHH-Hhhc-cCCEEEEECCCCCCCCCC---CC----CCC
Confidence 6766654321 23467999999532 22112344333 4565 599999999999654321 10 112
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccc-------cccccC-c---
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-------NKFTIA-Y--- 615 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------~~~~~~-~--- 615 (734)
.+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|....... ...... .
T Consensus 76 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T 1iup_A 76 YSKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMR 153 (282)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHH
Confidence 4567777666666655 23468999999999999999999999999999988765321000 000000 0
Q ss_pred ccccc-------------------cCCCCCHHHHHHHHh---------CC-ccCCCCCCCCCccCCcEEEEecCCCCCCC
Q psy4818 616 YSESE-------------------FGSPNNKTHFHNLLS---------YS-PLHNIKVPPNNTQYPATLVLTGDHDDRVP 666 (734)
Q Consensus 616 ~~~~~-------------------~g~~~~~~~~~~~~~---------~s-p~~~~~~p~~~~~~P~~Li~~g~~D~~v~ 666 (734)
.+... ...+.....+..+.. .. +...+.. ++.| +|+++|++|..+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~p 228 (282)
T 1iup_A 154 NLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKT----LPNE-TLIIHGREDQVVP 228 (282)
T ss_dssp HHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTT----CCSC-EEEEEETTCSSSC
T ss_pred HHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhh----cCCC-EEEEecCCCCCCC
Confidence 00000 001110000101000 00 0012222 6777 9999999999999
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 667 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 667 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
+..+.++.+.+.. .++++++++||....... .+..+.+.+||.+
T Consensus 229 ~~~~~~~~~~~~~-----------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 272 (282)
T 1iup_A 229 LSSSLRLGELIDR-----------AQLHVFGRCGHWTQIEQT--DRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHHHHHHHCTT-----------EEEEEESSCCSCHHHHSH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCC-----------CeEEEECCCCCCccccCH--HHHHHHHHHHHhc
Confidence 8887777665532 478999999998643222 3556667888875
No 192
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.51 E-value=3.7e-14 Score=149.45 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=77.4
Q ss_pred CCCcEEEEecCCCCCcCCc---ccc----------HHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccC----CCc
Q psy4818 486 RRNPVIIYGYGGYGVSVLP---TFS----------ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK----QNC 548 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~---~~~----------~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~----~~~ 548 (734)
+..|+||++||+.+..... .|. ..+...|+++||.|+++|+||.|.....- ........ ...
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~ 126 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLK-DRQLSFTANWGWSTW 126 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCC-GGGGGGGTTCSHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccc-ccccccccCCcHHHH
Confidence 4578999999987664311 122 13456677779999999999955432110 00000001 122
Q ss_pred hhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCC
Q psy4818 549 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVG 601 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~ 601 (734)
.+|+.+++++|.++ .+.++++++|+|+||++++.++.++ |++++++|+.++
T Consensus 127 ~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 127 ISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecc
Confidence 46777788887665 3457899999999999999999998 999999998854
No 193
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.51 E-value=2.5e-13 Score=136.73 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=74.9
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|.||++||..++.. .|.. ....|+++||.|+++|+||.|..... .....+++++.+.+..+++.-.
T Consensus 8 ~~g~~vvllHG~~~~~~--~w~~-~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~- 76 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW--IWYK-LKPLLESAGHKVTAVDLSAAGINPRR-------LDEIHTFRDYSEPLMEVMASIP- 76 (264)
T ss_dssp -CCCEEEEECCTTCCGG--GGTT-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHHHHHHHHHHHSC-
T ss_pred CCCCeEEEECCCccccc--hHHH-HHHHHHhCCCEEEEeecCCCCCCCCC-------cccccCHHHHHHHHHHHHHHhC-
Confidence 45688999999865443 3444 34667656999999999996654211 0112456677666655555421
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
..+++.|+||||||++++.++.++|++++++|+..+.
T Consensus 77 ~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 77 PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 1357999999999999999999999999999887653
No 194
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.51 E-value=1e-13 Score=139.86 Aligned_cols=206 Identities=20% Similarity=0.159 Sum_probs=124.0
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||..+.... |.. ....|++ +|.|+++|+||.|.... .. ....+++++.+.+..+++. ..
T Consensus 15 ~g~~vvllHG~~~~~~~--~~~-~~~~L~~-~~~vi~~Dl~G~G~S~~---~~----~~~~~~~~~~~dl~~~l~~--l~ 81 (269)
T 2xmz_A 15 TNQVLVFLHGFLSDSRT--YHN-HIEKFTD-NYHVITIDLPGHGEDQS---SM----DETWNFDYITTLLDRILDK--YK 81 (269)
T ss_dssp CSEEEEEECCTTCCGGG--GTT-THHHHHT-TSEEEEECCTTSTTCCC---CT----TSCCCHHHHHHHHHHHHGG--GT
T ss_pred CCCeEEEEcCCCCcHHH--HHH-HHHHHhh-cCeEEEecCCCCCCCCC---CC----CCccCHHHHHHHHHHHHHH--cC
Confidence 34569999998766543 333 3456765 69999999999664331 10 1134677777777776665 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc----c----------cc-cC-----cccccc--cCC-
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----K----------FT-IA-----YYSESE--FGS- 623 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~----------~~-~~-----~~~~~~--~g~- 623 (734)
.+++.++|||+||.+++.++.++|++++++|+..|...+.... . .. .. ..|... +..
T Consensus 82 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (269)
T 2xmz_A 82 DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQ 161 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGG
T ss_pred CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccccc
Confidence 5689999999999999999999999999999887643221000 0 00 00 000000 100
Q ss_pred -CCCHHHHH----------------HHHhCC----c--cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 624 -PNNKTHFH----------------NLLSYS----P--LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 624 -~~~~~~~~----------------~~~~~s----p--~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
....+..+ .+..+. + ...+.. +++| +|+++|++|..+++... ++.+ .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~-~~~~----~ 231 (269)
T 2xmz_A 162 LELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKE----IKVP-TLILAGEYDEKFVQIAK-KMAN----L 231 (269)
T ss_dssp GGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGG----CCSC-EEEEEETTCHHHHHHHH-HHHH----H
T ss_pred ccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHh----cCCC-EEEEEeCCCcccCHHHH-HHHh----h
Confidence 00111110 111110 1 112222 6777 99999999998876543 2333 3
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKS 724 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 724 (734)
-..+++++++++||....... .+..+.+.+||.+.
T Consensus 232 -------~~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 232 -------IPNSKCKLISATGHTIHVEDS--DEFDTMILGFLKEE 266 (269)
T ss_dssp -------STTEEEEEETTCCSCHHHHSH--HHHHHHHHHHHHHH
T ss_pred -------CCCcEEEEeCCCCCChhhcCH--HHHHHHHHHHHHHh
Confidence 224688999999998753322 35666788898764
No 195
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.50 E-value=7.5e-14 Score=143.13 Aligned_cols=228 Identities=9% Similarity=-0.036 Sum_probs=135.9
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccC
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 545 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~ 545 (734)
..+|.++..... ++.|+||++||..+.... |.. +...|++ +|.|+++|+||.|..... .. ....
T Consensus 15 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~L~~-~~~vi~~D~~G~G~S~~~---~~-~~~~ 78 (302)
T 1mj5_A 15 EIKGRRMAYIDE--------GTGDPILFQHGNPTSSYL--WRN-IMPHCAG-LGRLIACDLIGMGDSDKL---DP-SGPE 78 (302)
T ss_dssp EETTEEEEEEEE--------SCSSEEEEECCTTCCGGG--GTT-TGGGGTT-SSEEEEECCTTSTTSCCC---SS-CSTT
T ss_pred EECCEEEEEEEc--------CCCCEEEEECCCCCchhh--hHH-HHHHhcc-CCeEEEEcCCCCCCCCCC---CC-CCcc
Confidence 347877765432 235899999998765543 332 2345665 689999999996543211 00 0112
Q ss_pred CCchhHHHHHHHHHHHcCCCCC-CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcc---cc----------cc
Q psy4818 546 QNCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR---FN----------KF 611 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---~~----------~~ 611 (734)
...++++.+.+..+++. .+. +++.++|+|+||.+++.++.++|++++++|+.+|...... .. ..
T Consensus 79 ~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (302)
T 1mj5_A 79 RYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRS 156 (302)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhc
Confidence 25677777777766665 344 6899999999999999999999999999998887653110 00 00
Q ss_pred ccC-------cccccc-----cCCCCCHHHHHHHH------------------hCC--------------ccCCCCCCCC
Q psy4818 612 TIA-------YYSESE-----FGSPNNKTHFHNLL------------------SYS--------------PLHNIKVPPN 647 (734)
Q Consensus 612 ~~~-------~~~~~~-----~g~~~~~~~~~~~~------------------~~s--------------p~~~~~~p~~ 647 (734)
... ..+... .......+....+. ... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 233 (302)
T 1mj5_A 157 QAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSE--- 233 (302)
T ss_dssp TTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTT---
T ss_pred cchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhc---
Confidence 000 000000 00111111111111 110 0011222
Q ss_pred CccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 648 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 648 ~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
++.| +|+++|++|..+|+..+.++.+.+ . . ++.++ ++||....... .+..+.+.+|+.+..+.
T Consensus 234 -i~~P-~l~i~g~~D~~~~~~~~~~~~~~~----------~-~-~~~~~-~~gH~~~~e~p--~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 234 -SPIP-KLFINAEPGALTTGRMRDFCRTWP----------N-Q-TEITV-AGAHFIQEDSP--DEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp -CCSC-EEEEEEEECSSSSHHHHHHHTTCS----------S-E-EEEEE-EESSCGGGTCH--HHHHHHHHHHHHHHSCC
T ss_pred -cCCC-eEEEEeCCCCCCChHHHHHHHHhc----------C-C-ceEEe-cCcCcccccCH--HHHHHHHHHHHHhhccc
Confidence 5677 999999999999987655444322 2 2 77888 99998754433 46677789999998877
Q ss_pred CCCC
Q psy4818 728 KYYP 731 (734)
Q Consensus 728 ~~~~ 731 (734)
...|
T Consensus 297 ~~~~ 300 (302)
T 1mj5_A 297 HHHH 300 (302)
T ss_dssp CC--
T ss_pred cccc
Confidence 6655
No 196
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.50 E-value=4.7e-13 Score=135.43 Aligned_cols=212 Identities=12% Similarity=0.041 Sum_probs=126.1
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..+... .|.. ....|+++||.|+++|+||.|..... .....+++++.+.+..+++.-. ..
T Consensus 4 ~~~vvllHG~~~~~~--~w~~-~~~~L~~~g~rVia~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW--SWYK-LKPLLEAAGHKVTALDLAASGTDLRK-------IEELRTLYDYTLPLMELMESLS-AD 72 (273)
T ss_dssp CCEEEEECCTTCCGG--GGTT-HHHHHHHTTCEEEECCCTTSTTCCCC-------GGGCCSHHHHHHHHHHHHHTSC-SS
T ss_pred CCeEEEECCCCCCcc--hHHH-HHHHHHhCCCEEEEecCCCCCCCccC-------cccccCHHHHHHHHHHHHHHhc-cC
Confidence 478999999865543 3444 34667667999999999996643211 1122457777776666666521 13
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhc---------cccccccCcccc----cccCC-----------
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML---------RFNKFTIAYYSE----SEFGS----------- 623 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------~~~~~~~~~~~~----~~~g~----------- 623 (734)
+++.|+||||||++++.++.++|++++++|+.++..... ..........|. ..++.
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFG 152 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccC
Confidence 589999999999999999999999999999876532100 000000000000 00000
Q ss_pred ----------CCCHHHHHHHH---hCCcc--------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 624 ----------PNNKTHFHNLL---SYSPL--------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 624 ----------~~~~~~~~~~~---~~sp~--------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
....+...... ...+. ....... -.+.| +|+++|++|..+|+..+.++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P-~l~i~G~~D~~~p~~~~~~~~~~~p~~-- 228 (273)
T 1xkl_A 153 PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDER-FGSVK-RVYIVCTEDKGIPEEFQRWQIDNIGVT-- 228 (273)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTT-GGGSC-EEEEEETTCTTTTHHHHHHHHHHHCCS--
T ss_pred HHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhh-hCCCC-eEEEEeCCccCCCHHHHHHHHHhCCCC--
Confidence 00011111100 00010 0111000 13566 999999999999998887777766433
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
++++++++||....... .+..+.+.+|+.+..
T Consensus 229 ---------~~~~i~~aGH~~~~e~P--~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 229 ---------EAIEIKGADHMAMLCEP--QKLCASLLEIAHKYN 260 (273)
T ss_dssp ---------EEEEETTCCSCHHHHSH--HHHHHHHHHHHHHCC
T ss_pred ---------eEEEeCCCCCCchhcCH--HHHHHHHHHHHHHhc
Confidence 78889999998653332 356666788887653
No 197
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.50 E-value=1.8e-13 Score=141.37 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=80.5
Q ss_pred cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCch
Q psy4818 470 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 549 (734)
Q Consensus 470 ~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~ 549 (734)
.++.....-|. ...|.||++||.+++... |... ...|++.||.|+++|.||.|... ... .....++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~~--w~~~-~~~L~~~g~rvia~Dl~G~G~S~---~~~---~~~~y~~ 99 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTWSYL--YRKM-IPVFAESGARVIAPDFFGFGKSD---KPV---DEEDYTF 99 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCCGGG--GTTT-HHHHHHTTCEEEEECCTTSTTSC---EES---CGGGCCH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCchhh--HHHH-HHHHHhCCCeEEEeCCCCCCCCC---CCC---CcCCcCH
Confidence 77766544321 114789999998766543 4433 35566678999999999955432 111 0123456
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
+++.+.+..|++. ...+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 100 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~ 150 (310)
T 1b6g_A 100 EFHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAX 150 (310)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccc
Confidence 6666655555554 23358999999999999999999999999999987763
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=3.9e-12 Score=147.86 Aligned_cols=264 Identities=11% Similarity=0.037 Sum_probs=166.2
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCC--------
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS-------- 165 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~-------- 165 (734)
..++|||.+++|...+++.+...||+++..+++.....-. .....+++|||| +.|+|+....+.
T Consensus 168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~-------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK-------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE-------EEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC-------CceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 4566899999999988777778899999877664332110 112357999999 999999865431
Q ss_pred -ceEEEEEEECCCCCcccc---cc-c-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC-
Q psy4818 166 -DWNTLHIKDVDTGKDYPE---VL-K-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK- 238 (734)
Q Consensus 166 -~~~~l~v~dl~~g~~~~~---~~-~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~- 238 (734)
...+||++++.++..... .. . .....++.|||||++|+|...+.. .....||++++.++..+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-----------~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT-----------DPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT-----------CSCCEEEEEEEETTEECC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC-----------CCcceEEEEECCCCCCcc
Confidence 135799999988763111 11 1 112357899999999999886431 12458999998776222
Q ss_pred CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEE
Q psy4818 239 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELI 318 (734)
Q Consensus 239 ~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~ 318 (734)
-+.+....+ . . ..+ ++|||++|++..+.......|+++|++++. ..+..++.........++..++.++
T Consensus 309 ~~~l~~~~~-~-~-~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~l~~~~~~~l~~~~~~~~~lv 377 (741)
T 1yr2_A 309 VTALIPDLK-A-Q-WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFDTVVPESKDNLESVGIAGNRLF 377 (741)
T ss_dssp CEEEECSSS-S-C-EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-------CEEEEEECCCSSEEEEEEEEBTEEE
T ss_pred cEEecCCCC-c-e-EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccEEEecCCCCeEEEEEEECCEEE
Confidence 233433222 2 1 222 569999999988765445789999998721 1345555444333333455577888
Q ss_pred EEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-eeCCEEEEEEEeCC-ceeEEEEECCCCceeeeeC
Q psy4818 319 VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNV-RSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 319 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~l~~~dl~~g~~~~~l~ 393 (734)
+....++ ..+|+.++++++. .+.+..+. ...+..+.+ .+++.+++.+.... ...|+++|+.+|+. +.+.
T Consensus 378 ~~~~~dg-~~~l~~~~~~g~~---~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~-~~l~ 448 (741)
T 1yr2_A 378 ASYIHDA-KSQVLAFDLDGKP---AGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT-TPWE 448 (741)
T ss_dssp EEEEETT-EEEEEEEETTSCE---EEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE-EECS
T ss_pred EEEEECC-EEEEEEEeCCCCc---eeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEe
Confidence 7776544 4579999986543 23333222 233344433 34456777766544 45899999987763 4553
No 199
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.49 E-value=1.3e-13 Score=138.03 Aligned_cols=204 Identities=15% Similarity=0.077 Sum_probs=118.9
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.||++||..+.... |.. ....|++ .|.|+++|+||.|.... . ....++++.+.+..+++. ..
T Consensus 15 ~~~~vvllHG~~~~~~~--w~~-~~~~L~~-~~~via~Dl~G~G~S~~---~------~~~~~~~~a~dl~~~l~~--l~ 79 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDN--LGV-LARDLVN-DHNIIQVDVRNHGLSPR---E------PVMNYPAMAQDLVDTLDA--LQ 79 (255)
T ss_dssp CCCCEEEECCTTCCTTT--THH-HHHHHTT-TSCEEEECCTTSTTSCC---C------SCCCHHHHHHHHHHHHHH--HT
T ss_pred CCCCEEEEcCCcccHhH--HHH-HHHHHHh-hCcEEEecCCCCCCCCC---C------CCcCHHHHHHHHHHHHHH--cC
Confidence 45789999998765543 443 3466765 69999999999654321 1 123455555444444433 12
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC--Ccchhcc-c------c-c--c-ccCc-ccccc-cCC-CCCHHHH
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILV--GALDMLR-F------N-K--F-TIAY-YSESE-FGS-PNNKTHF 630 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~~-~------~-~--~-~~~~-~~~~~-~g~-~~~~~~~ 630 (734)
.+++.++|||+||.+++.++.++|++++++|+.. |...... . . . . .... ..... +.. .......
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T 3bf7_A 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHH
T ss_pred CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHH
Confidence 3579999999999999999999999999988753 2211000 0 0 0 0 0000 00000 000 0000000
Q ss_pred HHH--------------------HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc
Q psy4818 631 HNL--------------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 690 (734)
Q Consensus 631 ~~~--------------------~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~ 690 (734)
..+ ........+.. +++| +|+++|++|..+++..+.++.+.+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~l~i~G~~D~~~~~~~~~~~~~~~~-----------~ 223 (255)
T 3bf7_A 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPA----WDHP-ALFIPGGNSPYVSEQYRDDLLAQFP-----------Q 223 (255)
T ss_dssp HHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCC----CCSC-EEEECBTTCSTTCGGGHHHHHHHCT-----------T
T ss_pred HHHHHhccCCceeecHHHHHhhhhhccccccccc----cCCC-eEEEECCCCCCCCHHHHHHHHHHCC-----------C
Confidence 000 00000011222 6777 9999999999999888766655432 3
Q ss_pred EEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 691 LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 691 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.++++++++||....... .+....+.+||.+
T Consensus 224 ~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 224 ARAHVIAGAGHWVHAEKP--DAVLRAIRRYLND 254 (255)
T ss_dssp EEECCBTTCCSCHHHHCH--HHHHHHHHHHHHT
T ss_pred CeEEEeCCCCCccccCCH--HHHHHHHHHHHhc
Confidence 588999999998643322 3556667888864
No 200
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.49 E-value=3e-13 Score=141.14 Aligned_cols=105 Identities=11% Similarity=0.081 Sum_probs=74.7
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec----ccCCCCCchhhhccccccCCCchhHHHHHHHHHHH
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI----RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 561 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~----rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 561 (734)
+..|+||++||..+....+.+...+...| +.||.|+.+|+ ||.|... . ....+|+.+.+++|.+
T Consensus 36 ~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~---~--------~~~~~d~~~~~~~l~~ 103 (335)
T 2q0x_A 36 DARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQD---H--------AHDAEDVDDLIGILLR 103 (335)
T ss_dssp TSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCC---H--------HHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcc---c--------cCcHHHHHHHHHHHHH
Confidence 34688999999654433333223345566 46999999954 6744321 1 1235788888888876
Q ss_pred cCCCCCCcEEEEEcChHHHHHHHHHh--cCCCceeEEEEcCCcch
Q psy4818 562 KKYTKPKYITIMGGSNGGLLVGACLN--QRPELYGAALILVGALD 604 (734)
Q Consensus 562 ~~~~d~~ri~i~G~S~GG~~~~~~~~--~~p~~~~a~v~~~~~~d 604 (734)
. .+.+++.|+||||||.+++.++. ++|++++++|+.+|+.+
T Consensus 104 ~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 104 D--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp H--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred H--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 4 45678999999999999999988 57999999999877643
No 201
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.49 E-value=2.3e-13 Score=143.59 Aligned_cols=122 Identities=11% Similarity=0.048 Sum_probs=84.1
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++.....-|++ +..|+||++||..+.... |.. ....|+++||.|+++|+||.|.... .. ....
T Consensus 10 ~~g~~l~y~~~G~~~----~~~~~vv~~hG~~~~~~~--~~~-~~~~l~~~g~~vi~~d~~g~g~s~~---~~---~~~~ 76 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD----QQGPLVVLLHGFPESWYS--WRH-QIPALAGAGYRVVAIDQRGYGRSSK---YR---VQKA 76 (356)
T ss_dssp ETTEEEEEEEECCTT----CCSCEEEEECCTTCCGGG--GTT-THHHHHHTTCEEEEECCTTSTTSCC---CC---SGGG
T ss_pred cCCeEEEEEEecCCC----CCCCEEEEECCCCCcHHH--HHH-HHHHHHHcCCEEEEEcCCCCCCCCC---CC---cccc
Confidence 478888777655432 346899999998765543 333 2355666799999999999554321 11 1112
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
..++++...+..+++. ++.+++.++|+|+||.+++.++.++|++++++|+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 77 YRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 3455655555555544 355689999999999999999999999999999876543
No 202
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.49 E-value=1.1e-13 Score=141.42 Aligned_cols=120 Identities=12% Similarity=0.045 Sum_probs=82.9
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++..... ++.|+||++||..+.... |.. +...|++ +|.|+++|+||.|..... .. .....
T Consensus 15 ~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~l~~-~~~vi~~D~~G~G~S~~~---~~-~~~~~ 78 (297)
T 2qvb_A 15 IAGKRMAYIDE--------GKGDAIVFQHGNPTSSYL--WRN-IMPHLEG-LGRLVACDLIGMGASDKL---SP-SGPDR 78 (297)
T ss_dssp ETTEEEEEEEE--------SSSSEEEEECCTTCCGGG--GTT-TGGGGTT-SSEEEEECCTTSTTSCCC---SS-CSTTS
T ss_pred ECCEEEEEEec--------CCCCeEEEECCCCchHHH--HHH-HHHHHhh-cCeEEEEcCCCCCCCCCC---CC-ccccC
Confidence 46777665432 235899999998765543 332 2355665 799999999996543211 00 01122
Q ss_pred CchhHHHHHHHHHHHcCCCCC-CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 547 NCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
..++++.+.+..+++. .+. +++.++|||+||.+++.++.++|++++++|+.+|...
T Consensus 79 ~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 79 YSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp SCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 4667777666666654 344 6899999999999999999999999999999887653
No 203
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.49 E-value=4.4e-13 Score=137.48 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=79.6
Q ss_pred cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCch
Q psy4818 470 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 549 (734)
Q Consensus 470 ~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~ 549 (734)
.++.....-+. ...|.||++||.+++... |... ...|+++||.|+++|+||.|.... .. .....++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~~--w~~~-~~~L~~~g~rvia~Dl~G~G~S~~---~~---~~~~~~~ 98 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSWSFL--YRKM-LPVFTAAGGRVVAPDLFGFGRSDK---PT---DDAVYTF 98 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCCGGG--GTTT-HHHHHHTTCEEEEECCTTSTTSCE---ES---CGGGCCH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCccee--HHHH-HHHHHhCCcEEEEeCCCCCCCCCC---CC---CcccCCH
Confidence 66765443221 115789999998765543 4433 355666799999999999664321 10 0123456
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
+++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 99 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 149 (297)
T 2xt0_A 99 GFHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTA 149 (297)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCC
Confidence 6666655555554 23368999999999999999999999999999987764
No 204
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.48 E-value=4e-12 Score=134.05 Aligned_cols=251 Identities=7% Similarity=0.030 Sum_probs=151.0
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCc-eEEEEEEECCCCCccccc-----ccccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYPEV-----LKNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~-~~~l~v~dl~~g~~~~~~-----~~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
+...+..++|||||++||-.......- ...|++|+..++...... .....+..++|+||++.| ....+
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d----- 114 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS----- 114 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----
Confidence 445689999999999999776543211 357999999887643211 111124678999998644 34322
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
..|.+|++.++....+..+....+...+..++|||||++|+... ....|.+||+.++
T Consensus 115 -----------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs----~dg~v~iwd~~~~-------- 171 (357)
T 4g56_B 115 -----------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG----KDFSVKVWDLSQK-------- 171 (357)
T ss_dssp -----------SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE----TTSCEEEEETTTT--------
T ss_pred -----------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe----CCCeEEEEECCCC--------
Confidence 15788888766433222222223344677899999999987433 2257999999872
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEE
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYI 371 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~ 371 (734)
.....+.......... |+++++.+++.... +..|.++|+.++.. ...+........+..+.+. +++.++++..
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeecc---CCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEee
Confidence 1122222222333333 88888766555443 34588999987652 1222212223334455554 3356666666
Q ss_pred eCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 372 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+ ..|++||+.+++.++.+......|..+.++|++..++++.+.. ..+.+||+
T Consensus 247 ~d--~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D---~~i~iwd~ 299 (357)
T 4g56_B 247 ET--GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED---CTVAVLDA 299 (357)
T ss_dssp SS--SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT---SCEEEECT
T ss_pred cc--cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC---CEEEEEEC
Confidence 55 4689999988887777876667788889999887777666543 36899998
No 205
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.48 E-value=4.3e-13 Score=139.62 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=78.1
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++..... +..|+||++||.++... .|... ...|+++||.|+++|+||.|.... .. ......
T Consensus 18 ~~g~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~via~Dl~G~G~S~~---~~-~~~~~~ 82 (328)
T 2cjp_A 18 VNGLNMHLAEL--------GEGPTILFIHGFPELWY--SWRHQ-MVYLAERGYRAVAPDLRGYGDTTG---AP-LNDPSK 82 (328)
T ss_dssp ETTEEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTCBC---CC-TTCGGG
T ss_pred CCCcEEEEEEc--------CCCCEEEEECCCCCchH--HHHHH-HHHHHHCCcEEEEECCCCCCCCCC---cC-cCCccc
Confidence 47776655432 13478999999876543 34433 456666799999999999654321 10 000112
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
..++++.+.+..+++.-..+.+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 83 ~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 83 FSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp GSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 3445554444444433111246899999999999999999999999999998653
No 206
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.48 E-value=7.3e-13 Score=135.72 Aligned_cols=120 Identities=9% Similarity=-0.017 Sum_probs=84.8
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccC
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 545 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~ 545 (734)
..+|.++..... +..|+||++||..+.... |.. +...|.+ ||.|+++|+||.|..... .......
T Consensus 19 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~l~~-~~~v~~~D~~G~G~S~~~---~~~~~~~ 83 (306)
T 3r40_A 19 NTSSGRIFARVG--------GDGPPLLLLHGFPQTHVM--WHR-VAPKLAE-RFKVIVADLPGYGWSDMP---ESDEQHT 83 (306)
T ss_dssp CCTTCCEEEEEE--------ECSSEEEEECCTTCCGGG--GGG-THHHHHT-TSEEEEECCTTSTTSCCC---CCCTTCG
T ss_pred EeCCEEEEEEEc--------CCCCeEEEECCCCCCHHH--HHH-HHHHhcc-CCeEEEeCCCCCCCCCCC---CCCcccC
Confidence 347877766542 245789999998765543 443 3466776 999999999996643311 1100011
Q ss_pred CCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 546 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
...++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 84 PYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 34567777766666665 34468999999999999999999999999999998864
No 207
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.48 E-value=2.7e-13 Score=137.60 Aligned_cols=248 Identities=14% Similarity=0.097 Sum_probs=145.2
Q ss_pred eEEEEEEEcC-CCcEEeEEEEEecccc-----CCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecc--c-
Q psy4818 458 QTKQVYFRSK-DGTRVPMYIIHRVGAL-----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR--G- 528 (734)
Q Consensus 458 ~~~~~~~~s~-dg~~i~~~~~~p~~~~-----~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r--G- 528 (734)
...++++.|. -+.++...||+|+++. +++++|+|.++||..+....+.-......++++.|.++++++.. +
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~ 92 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGD 92 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCST
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCccee
Confidence 5667777775 5778999999999874 35679999999998655433222222456677779999998742 1
Q ss_pred ----CC------CCCchhhhcccc-c-cCCCchhHHHH--HHHHHHHc-------CCCCCCcEEEEEcChHHHHHHHHHh
Q psy4818 529 ----GG------ELGEDWHNAGRL-L-KKQNCFDDFQA--AAEYMINK-------KYTKPKYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 529 ----~~------~~g~~~~~~~~~-~-~~~~~~~D~~~--~~~~l~~~-------~~~d~~ri~i~G~S~GG~~~~~~~~ 587 (734)
+. +.+..|+..... . .+...+++++. .+.++.++ ...+.++.+|.|+||||+-|+.++.
T Consensus 93 ~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al 172 (299)
T 4fol_A 93 EVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYL 172 (299)
T ss_dssp TSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHH
T ss_pred ecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHH
Confidence 10 011112211100 0 11222334321 23333222 2245678999999999999999988
Q ss_pred cC--CCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccC---CCCCCCCCccCCcEEEEecCCC
Q psy4818 588 QR--PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLH---NIKVPPNNTQYPATLVLTGDHD 662 (734)
Q Consensus 588 ~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~---~~~~p~~~~~~P~~Li~~g~~D 662 (734)
++ |+.|+++.+.+|+.+........ ..+...+|... ..+..+++.. +... ...|++||.+|+.|
T Consensus 173 ~~~~~~~~~~~~s~s~~~~p~~~~~~~--~~~~~~~g~~~-----~~~~~~d~~~l~~~~~~----~~~~~i~id~G~~D 241 (299)
T 4fol_A 173 KGYSGKRYKSCSAFAPIVNPSNVPWGQ--KAFKGYLGEEK-----AQWEAYDPCLLIKNIRH----VGDDRILIHVGDSD 241 (299)
T ss_dssp HTGGGTCCSEEEEESCCCCGGGSHHHH--HHHHHHTC----------CGGGCHHHHGGGSCC----CTTCCEEEEEETTC
T ss_pred hCCCCCceEEEEecccccCcccccccc--cccccccccch-----hhhhhcCHHHHHHhccc----CCCCceEEEecCCC
Confidence 74 67899999999988754321100 00111123211 1112333322 2222 23345999999999
Q ss_pred CCCCCh-HHHHHHHHHHhhhCCCCCCCCc--EEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCC
Q psy4818 663 DRVPPL-HSYKFIATLQEKIGSLPYQKNP--LLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGL 727 (734)
Q Consensus 663 ~~v~~~-~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 727 (734)
....-. .+..|.++++++ |.+ ++++..+|.+|... . ......+-+.|..++||+
T Consensus 242 ~f~~~~l~~~~f~~a~~~~-------g~~~~~~~r~~~GydHsy~---f-~~~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 242 PFLEEHLKPELLLEAVKAT-------SWQDYVEIKKVHGFDHSYY---F-VSTFVPEHAEFHARNLGL 298 (299)
T ss_dssp TTHHHHTCTHHHHHHHTTS-------TTTTCEEEEEETTCCSSHH---H-HHHHHHHHHHHHHHHTTC
T ss_pred cchhhhcCHHHHHHHHHhc-------CCCceEEEEeCCCCCCCHH---H-HHHHHHHHHHHHHHhcCC
Confidence 754211 235688888776 655 88999999899642 1 223455568999999986
No 208
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.48 E-value=2e-13 Score=139.87 Aligned_cols=114 Identities=10% Similarity=0.011 Sum_probs=82.8
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++.....- ..|+||++||+.+.... |.. ....|+++ |.|+++|+||.|..... ...
T Consensus 17 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~~-~~~~L~~~-~~vi~~D~~G~G~S~~~--------~~~ 76 (301)
T 3kda_A 17 VDGVKLHYVKGG--------QGPLVMLVHGFGQTWYE--WHQ-LMPELAKR-FTVIAPDLPGLGQSEPP--------KTG 76 (301)
T ss_dssp ETTEEEEEEEEE--------SSSEEEEECCTTCCGGG--GTT-THHHHTTT-SEEEEECCTTSTTCCCC--------SSC
T ss_pred eCCeEEEEEEcC--------CCCEEEEECCCCcchhH--HHH-HHHHHHhc-CeEEEEcCCCCCCCCCC--------CCC
Confidence 378777755432 45789999998766543 433 34567764 99999999996644311 233
Q ss_pred CchhHHHHHHHHHHHcCCCCCCc-EEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
..++++.+.+..+++. ...++ +.++|||+||.+++.++.++|++++++|+.+|.
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 77 YSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp SSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred ccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 4566776666666554 23456 999999999999999999999999999988875
No 209
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.48 E-value=9.2e-13 Score=134.08 Aligned_cols=124 Identities=19% Similarity=0.154 Sum_probs=83.0
Q ss_pred EEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhc
Q psy4818 460 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 539 (734)
Q Consensus 460 ~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~ 539 (734)
+...+.+.+|.++....+-+++ +.|.||++||..+... .|.. +...|++ ||.|+++|+||.|.... ..
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~~~--~~~~-~~~~L~~-~~~vi~~Dl~G~G~S~~---~~ 73 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRNAR--DFED-LATRLAG-DWRVLCPEMRGRGDSDY---AK 73 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-----TSCCEEEECCTTCCGG--GGHH-HHHHHBB-TBCEEEECCTTBTTSCC---CS
T ss_pred ccCeeecCCCceEEEEEcCCCC-----CCCcEEEECCCCcchh--hHHH-HHHHhhc-CCEEEeecCCCCCCCCC---CC
Confidence 4455667789888776654321 2577899999865543 3443 4566765 99999999999664321 10
Q ss_pred cccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 540 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 540 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
.....+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..
T Consensus 74 ---~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 74 ---DPMTYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp ---SGGGCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred ---CccccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 01123444444444333333 123579999999999999999999999999998753
No 210
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.47 E-value=1.7e-10 Score=120.89 Aligned_cols=244 Identities=12% Similarity=0.058 Sum_probs=152.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCC--CceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSG--SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g--~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
...++|||||++|+++...+. .....|+++|+++++.+...........++|+|||+.++++...
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------------- 109 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTV------------- 109 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETT-------------
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecC-------------
Confidence 457899999999966654321 12468999999999865433222334689999999988776532
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCC-------CeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNG-------RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~-------~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
...|+++++.++.. +..+..... +....++.|||||+++++.... ....|+++|+.++.
T Consensus 110 --~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~i~~~d~~~~~-------- 175 (353)
T 3vgz_A 110 --NSAVTAIDAKTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--KESVIWVVDGGNIK-------- 175 (353)
T ss_dssp --TTEEEEEETTTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--SSCEEEEEETTTTE--------
T ss_pred --CCEEEEEeCCCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--CCceEEEEcCCCCc--------
Confidence 23788888877642 122222111 1124578999999998876532 23679999998731
Q ss_pred Cceeeec--cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-C--CCceeEEEEEe-eCCEEEE
Q psy4818 295 PLKTVIP--GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-D--ENRTLDVVAAV-ANNKLIV 368 (734)
Q Consensus 295 ~~~~l~~--~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~--~~~~~~~~~~~-~~~~l~~ 368 (734)
....+. +.......|+|||+.+|+... ...|+.+|+.+++ ....+.. . .......+.+. +++.+++
T Consensus 176 -~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 176 -LKTAIQNTGKMSTGLALDSEGKRLYTTNA----DGELITIDTADNK---ILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp -EEEEECCCCTTCCCCEEETTTTEEEEECT----TSEEEEEETTTTE---EEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred -eEEEecCCCCccceEEECCCCCEEEEEcC----CCeEEEEECCCCe---EEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 112222 111112249999998887543 3479999998765 2222222 1 12233344444 4455655
Q ss_pred EEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 369 HYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 369 ~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
... ....|++||+.+++.+..+..+.. ..+.++++++.++++.... ..++.+|+
T Consensus 248 ~~~--~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~---~~v~~~d~ 301 (353)
T 3vgz_A 248 TDS--KAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQA---GKVSVIDA 301 (353)
T ss_dssp EES--SSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTT---TEEEEEET
T ss_pred EeC--CCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCC---CeEEEEEC
Confidence 442 336899999988987777765432 2466778888777765432 47999998
No 211
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.47 E-value=1.1e-13 Score=139.78 Aligned_cols=210 Identities=15% Similarity=0.126 Sum_probs=123.9
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+||++||..+.... |.. +...|++ +|.|+++|+||.|.....-.. .....+++++.+.+..+++. .+.
T Consensus 20 ~~~vvllHG~~~~~~~--w~~-~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~--l~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGCDQSV--WNA-VAPAFEE-DHRVILFDYVGSGHSDLRAYD----LNRYQTLDGYAQDVLDVCEA--LDL 89 (271)
T ss_dssp SSEEEEECCTTCCGGG--GTT-TGGGGTT-TSEEEECCCSCCSSSCCTTCC----TTGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCcEEEEcCCCCchhh--HHH-HHHHHHh-cCeEEEECCCCCCCCCCCccc----ccccccHHHHHHHHHHHHHH--cCC
Confidence 4789999997655433 333 2345665 899999999996654311000 01112455665555555544 234
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccc-----ccc-------------cCccccc-----ccCCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-----KFT-------------IAYYSES-----EFGSP 624 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-----~~~-------------~~~~~~~-----~~g~~ 624 (734)
+++.++|||+||.+++.++.++|++++++|+..+........ .+. ....|.. .++.+
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999999999887642110000 000 0000100 01222
Q ss_pred CCHHHHHH----HHhCCc---------------cCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCC
Q psy4818 625 NNKTHFHN----LLSYSP---------------LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 685 (734)
Q Consensus 625 ~~~~~~~~----~~~~sp---------------~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~ 685 (734)
..++..+. +....| ...+.. +++| +|+++|++|..+|+..+..+.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lvi~G~~D~~~~~~~~~~~~~~~~------- 237 (271)
T 1wom_A 170 DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSK----VTVP-SLILQCADDIIAPATVGKYMHQHLP------- 237 (271)
T ss_dssp TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTT----CCSC-EEEEEEETCSSSCHHHHHHHHHHSS-------
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccc----cCCC-EEEEEcCCCCcCCHHHHHHHHHHCC-------
Confidence 22211111 111111 111222 6777 9999999999999877766655442
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 686 YQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
..++++++++||....... .+....+.+||.+++
T Consensus 238 ----~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 238 ----YSSLKQMEARGHCPHMSHP--DETIQLIGDYLKAHV 271 (271)
T ss_dssp ----SEEEEEEEEESSCHHHHCH--HHHHHHHHHHHHHHC
T ss_pred ----CCEEEEeCCCCcCccccCH--HHHHHHHHHHHHhcC
Confidence 2578899999998643222 355667888998763
No 212
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.47 E-value=1.8e-13 Score=129.05 Aligned_cols=169 Identities=15% Similarity=0.001 Sum_probs=114.9
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCe---EEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG---IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.|+||++||..+... .|. .+...|.++|| .|+.+|+||.+... . ..++++.+.++.++++
T Consensus 3 ~~~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~~~~v~~~d~~g~g~s~---~---------~~~~~~~~~~~~~~~~-- 65 (181)
T 1isp_A 3 HNPVVMVHGIGGASF--NFA-GIKSYLVSQGWSRDKLYAVDFWDKTGTN---Y---------NNGPVLSRFVQKVLDE-- 65 (181)
T ss_dssp CCCEEEECCTTCCGG--GGH-HHHHHHHHTTCCGGGEEECCCSCTTCCH---H---------HHHHHHHHHHHHHHHH--
T ss_pred CCeEEEECCcCCCHh--HHH-HHHHHHHHcCCCCccEEEEecCCCCCch---h---------hhHHHHHHHHHHHHHH--
Confidence 578999999865543 343 34566777898 59999999955321 1 2345666666666554
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCCC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 642 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~ 642 (734)
.+.+++.++|||+||.+++.++.++ |+.++++|+.+|......... + +. ..+
T Consensus 66 ~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~----------~--~~----------~~~---- 119 (181)
T 1isp_A 66 TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA----------L--PG----------TDP---- 119 (181)
T ss_dssp HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC----------C--CC----------SCT----
T ss_pred cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc----------C--CC----------CCC----
Confidence 3456899999999999999999887 889999999998765422100 0 00 001
Q ss_pred CCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 643 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 643 ~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
. .+.| +|+++|++|..||+..+. + ...++++++++||.+.... .+....+.+||.
T Consensus 120 -~----~~~p-~l~i~G~~D~~v~~~~~~-----~-----------~~~~~~~~~~~gH~~~~~~---~~~~~~i~~fl~ 174 (181)
T 1isp_A 120 -N----QKIL-YTSIYSSADMIVMNYLSR-----L-----------DGARNVQIHGVGHIGLLYS---SQVNSLIKEGLN 174 (181)
T ss_dssp -T----CCCE-EEEEEETTCSSSCHHHHC-----C-----------BTSEEEEESSCCTGGGGGC---HHHHHHHHHHHT
T ss_pred -c----cCCc-EEEEecCCCccccccccc-----C-----------CCCcceeeccCchHhhccC---HHHHHHHHHHHh
Confidence 0 2344 999999999999987421 1 1247788999999875433 246666788876
Q ss_pred HH
Q psy4818 723 KS 724 (734)
Q Consensus 723 ~~ 724 (734)
+.
T Consensus 175 ~~ 176 (181)
T 1isp_A 175 GG 176 (181)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 213
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.46 E-value=4.2e-13 Score=134.45 Aligned_cols=210 Identities=10% Similarity=0.012 Sum_probs=123.3
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||...... .|.. ....|+++||.|+++|+||.|..... .....+++++.+.+..+++.-. ..
T Consensus 3 ~~~vvllHG~~~~~~--~w~~-~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW--IWHK-LKPLLEALGHKVTALDLAASGVDPRQ-------IEEIGSFDEYSEPLLTFLEALP-PG 71 (257)
T ss_dssp CCEEEEECCTTCCGG--GGTT-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHTHHHHHHHHTSC-TT
T ss_pred CCcEEEEcCCccCcC--CHHH-HHHHHHhCCCEEEEeCCCCCCCCCCC-------cccccCHHHHHHHHHHHHHhcc-cc
Confidence 367999999765443 3444 34667667999999999996653211 1112457777776666665521 12
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc-h-------hcc-ccc-cc-cCcccc----------------c-
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL-D-------MLR-FNK-FT-IAYYSE----------------S- 619 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d-------~~~-~~~-~~-~~~~~~----------------~- 619 (734)
+++.++||||||++++.++.++|++++++|+.++.. . +.. ... .. ....+. .
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFT 151 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHH
Confidence 579999999999999999999999999998766531 0 000 000 00 000000 0
Q ss_pred ----ccCCCCCHHHHHHHHh-CCcc----------CCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 620 ----EFGSPNNKTHFHNLLS-YSPL----------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 620 ----~~g~~~~~~~~~~~~~-~sp~----------~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
.+......+....... ..|. ....... -.+.| +|+++|++|..+|+..+.++++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P-~l~i~G~~D~~~p~~~~~~~~~~~~~----- 224 (257)
T 3c6x_A 152 LLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEG-YGSIK-KIYVWTDQDEIFLPEFQLWQIENYKP----- 224 (257)
T ss_dssp HHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTT-GGGSC-EEEEECTTCSSSCHHHHHHHHHHSCC-----
T ss_pred HHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhh-cCccc-EEEEEeCCCcccCHHHHHHHHHHCCC-----
Confidence 0000001111111110 0110 0111000 02566 99999999999999888777776543
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 685 PYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
.++++++++||....... .+..+.+.+|+..
T Consensus 225 ------~~~~~i~~~gH~~~~e~P--~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 225 ------DKVYKVEGGDHKLQLTKT--KEIAEILQEVADT 255 (257)
T ss_dssp ------SEEEECCSCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred ------CeEEEeCCCCCCcccCCH--HHHHHHHHHHHHh
Confidence 378899999998643322 3555667778764
No 214
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.46 E-value=2.7e-11 Score=125.54 Aligned_cols=239 Identities=11% Similarity=0.079 Sum_probs=155.4
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
+...+..+.|+|+++.++-... ...|++||+.+++.+... ........++|+|||+.|+....+
T Consensus 79 h~~~v~~~~~~~~~~~l~s~s~-----D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---------- 143 (321)
T 3ow8_A 79 HQLGVVSVDISHTLPIAASSSL-----DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---------- 143 (321)
T ss_dssp CSSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT----------
T ss_pred CCCCEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC----------
Confidence 3455888999999998875442 247999999999864322 222234679999999988876532
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
..|.++++.++.. ...+.. ....+..++|||||++|+.... ...|.+||+.++. ....
T Consensus 144 ------g~v~i~~~~~~~~--~~~~~~--~~~~v~~~~~spdg~~lasg~~----dg~i~iwd~~~~~--------~~~~ 201 (321)
T 3ow8_A 144 ------GKVNIFGVESGKK--EYSLDT--RGKFILSIAYSPDGKYLASGAI----DGIINIFDIATGK--------LLHT 201 (321)
T ss_dssp ------SEEEEEETTTCSE--EEEEEC--SSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE--------EEEE
T ss_pred ------CcEEEEEcCCCce--eEEecC--CCceEEEEEECCCCCEEEEEcC----CCeEEEEECCCCc--------EEEE
Confidence 2688888876542 222222 2335678999999999985432 2579999998731 1222
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
+.......... |+|||+.|+..+. +..|..+|+.++. ....+... ...+..+.+..++..+++...+ ..
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~----dg~i~iwd~~~~~---~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D--~~ 271 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASD----DGYIKIYDVQHAN---LAGTLSGH-ASWVLNVAFCPDDTHFVSSSSD--KS 271 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECT----TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECTTSSEEEEEETT--SC
T ss_pred EcccCCceeEEEEcCCCCEEEEEcC----CCeEEEEECCCcc---eeEEEcCC-CCceEEEEECCCCCEEEEEeCC--Cc
Confidence 22222223333 9999987665433 3458899997654 23333332 2334555555446666666666 47
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|.+||+.+++.+..+....+.|..+.++++++.++ +.+.. ..+.+||.
T Consensus 272 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-s~~~d---~~i~vwd~ 319 (321)
T 3ow8_A 272 VKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV-SVGDD---QEIHIYDC 319 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETT---CCEEEEEC
T ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-EEeCC---CeEEEEeC
Confidence 99999988888778876667788888999887654 33332 35777775
No 215
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.46 E-value=1.7e-11 Score=124.79 Aligned_cols=231 Identities=9% Similarity=0.043 Sum_probs=153.1
Q ss_pred CCcEEeCCeEEEEEEcCCC---------CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEE-eCC
Q psy4818 94 SAPQRQENNYFYFHNKGLQ---------NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCL-SKS 163 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~---------~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~-~~~ 163 (734)
+...++|+|+||.....+. +...||+++..+++.++|.+.. +..|||+|++|+|+. +..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-----------~~~~s~~g~~Iy~~~~~~~ 126 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-----------CIYASLIGNYIYYLHYDTQ 126 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----------EEEEEEETTEEEEEEESSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----------ccEEEEeCCEEEEEeecCC
Confidence 3445899999999886532 2467999988777766666532 237899999999987 233
Q ss_pred CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEE
Q psy4818 164 GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 243 (734)
Q Consensus 164 g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~ 243 (734)
+. ..|+.+++++......+.... ..|+|||+.|||+.. ...+||+.++++... ..++
T Consensus 127 ~~--~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~---------------g~~~Iy~~~l~g~~~--~~l~ 183 (302)
T 3s25_A 127 TA--TSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP---------------KNGQLYRYDTASQSE--ALFY 183 (302)
T ss_dssp SC--EEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT---------------TTCCEEEEETTTTEE--EEEE
T ss_pred CC--ceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC---------------CCceEEEEECCCCCE--EEEe
Confidence 33 789999999766444333322 456889999999863 123799999987643 3444
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCC
Q psy4818 244 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTK 323 (734)
Q Consensus 244 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~ 323 (734)
.. . .. . .++|+|++|+++.... ...|+.++++++. .+.|+... ...++|+|++|||.++.
T Consensus 184 ~~---~-~~-~-~~~P~g~~iy~t~~~~--~~~I~~~~ldG~~---------~~~Lt~~~---~~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 184 DC---N-CY-K-PVVLDDTNVYYMDVNR--DNAIVHVNINNPN---------PVVLTEAN---IEHYNVYGSLIFYQRGG 243 (302)
T ss_dssp CS---C-EE-E-EEEEETTEEEEEEGGG--TTEEEEECSSSCC---------CEECSCSC---EEEEEEETTEEEEEECS
T ss_pred CC---C-cc-c-eeeecCCEEEEEEcCC--CcEEEEEECCCCC---------eEEEeCCC---cceEEECCCEEEEEECC
Confidence 32 2 22 2 3569999999876542 2689999999832 23343321 23489999999998765
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeee
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 391 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~ 391 (734)
.. ..|+++++++.. .+.|.... +..+.+.. +.|+++....+ .|+++.+ +|....+
T Consensus 244 ~~--~~i~~~~~DG~~---r~~l~~~~----~~~i~i~~-d~Iy~td~~~~--~i~~~~~-dGs~~~~ 298 (302)
T 3s25_A 244 DN--PALCVVKNDGTG---FKELAKGE----FCNINVTS-QYVYFTDFVSN--KEYCTST-QNPDTIK 298 (302)
T ss_dssp SS--CEEEEEETTSCC---CEEEEESC----EEEEEECS-SEEEEEETTTC--CEEEEES-SSCCSCE
T ss_pred CC--cEEEEEECCCCc---cEEeeCCc----cceEEEeC-CEEEEEECCCC--eEEEEEC-CCCCceE
Confidence 33 679999999865 24444332 23444454 88988764443 4888887 6654333
No 216
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.46 E-value=2.5e-13 Score=136.56 Aligned_cols=208 Identities=14% Similarity=0.064 Sum_probs=124.0
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.++.|+||++||+.+... .|.. +...|++ +|.|+++|+||.|. ... ......++++.+.+..+++.
T Consensus 17 ~~~~~~vv~~HG~~~~~~--~~~~-~~~~l~~-~~~v~~~d~~G~G~---s~~-----~~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 17 PDARARLVCLPHAGGSAS--FFFP-LAKALAP-AVEVLAVQYPGRQD---RRH-----EPPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp TTCSEEEEEECCTTCCGG--GGHH-HHHHHTT-TEEEEEECCTTSGG---GTT-----SCCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCceEEEeCCCCCCch--hHHH-HHHHhcc-CcEEEEecCCCCCC---CCC-----CCCCcCHHHHHHHHHHHHHh--
Confidence 356799999999865432 3433 4566765 79999999999443 211 12234566766666655554
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCc----eeEEEEcCCcchhccccccccC--c-cc---ccccC-CC----CCH--
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFNKFTIA--Y-YS---ESEFG-SP----NNK-- 627 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~~~~~~--~-~~---~~~~g-~~----~~~-- 627 (734)
.+.+++.|+|+|+||++++.++.++|+. ++++|+..+............. . .+ ...++ .+ .++
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 2557899999999999999999999985 7888877665322111000000 0 00 00000 00 000
Q ss_pred ---------HHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy4818 628 ---------THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 698 (734)
Q Consensus 628 ---------~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 698 (734)
..+..+..+.+... . .++.| +|+++|++|..+++..+.++.+.+ ..+++++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~----------~~~~~~~~~~g 226 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEPG-R----RVDCP-VTVFTGDHDPRVSVGEARAWEEHT----------TGPADLRVLPG 226 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTT-C----CBSSC-EEEEEETTCTTCCHHHHHGGGGGB----------SSCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhccccccc-C----cCCCC-EEEEecCCCCCCCHHHHHHHHHhc----------CCCceEEEecC
Confidence 11122223332222 2 26777 999999999999987766554433 23578999998
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 699 AGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 699 ~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
||.+.... ..+....+.+||.+..
T Consensus 227 -gH~~~~~~--~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 227 -GHFFLVDQ--AAPMIATMTEKLAGPA 250 (267)
T ss_dssp -STTHHHHT--HHHHHHHHHHHTC---
T ss_pred -CceeeccC--HHHHHHHHHHHhcccc
Confidence 99865322 2355566777776654
No 217
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.46 E-value=5.2e-13 Score=135.90 Aligned_cols=125 Identities=10% Similarity=-0.019 Sum_probs=81.1
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCC-c--cccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcccccc
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-P--TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 544 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~--~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~ 544 (734)
+|.+|.....-+. +...|+||++||..+.... + .|.......|++ +|.|+++|+||.|.... ... ...
T Consensus 19 ~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~---~~~-~~~ 89 (286)
T 2qmq_A 19 PYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAP---VFP-LGY 89 (286)
T ss_dssp TTEEEEEEEESCC----CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCC---CCC-TTC
T ss_pred CCeEEEEEeccCC----CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCC---CCC-CCC
Confidence 5666665544321 1256899999998665431 1 122114566775 89999999999543211 100 000
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 545 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
....++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+.+|..
T Consensus 90 ~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 90 QYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 112566666655555544 233579999999999999999999999999999988854
No 218
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.45 E-value=7e-14 Score=142.64 Aligned_cols=152 Identities=14% Similarity=0.094 Sum_probs=100.6
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhcCCCcee-EEEEcCCcchhccccccccCcccccccCCCCCHHHHHHHHhCCccCC
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQRPELYG-AALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 641 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~-a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 641 (734)
..+|++||+|+|+|+||+|++.++.++|++|+ ++++.++......... .....+...++.+...+......+.+++..
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQ-YYTSCMYNGYPSITTPTANMKSWSGNQIAS 84 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSS-CGGGGSTTCCCCCHHHHHHHHHHBTTTBCC
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchH-HHHHHhhccCCCCCCHHHHHHHhhcccCCh
Confidence 45899999999999999999999999999998 8766655321110000 000000000111111222221212145555
Q ss_pred CCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCC--CcEEEEEeCCCCCCCCCchH--H--------
Q psy4818 642 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK--NPLLLRVEQDAGHGQGTPLM--K-------- 709 (734)
Q Consensus 642 ~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~--~-------- 709 (734)
+.. ++.||+||+||++|++||+.++.+++++|++. + .++++++++++||++..... .
T Consensus 85 ~~~----l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~-------g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~ 153 (318)
T 2d81_A 85 VAN----LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNF-------DNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLST 153 (318)
T ss_dssp GGG----GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTT-------SCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCC
T ss_pred hHc----CCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhc-------CCCcceEEEEeCCCCCCCccCCcccCccccccCC
Confidence 443 45566999999999999999999999999887 5 37999999999998643221 0
Q ss_pred -------hHHHHHHHHHHHHHHcC
Q psy4818 710 -------SIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 710 -------~~~~~~~~~~fl~~~l~ 726 (734)
.++....+++||...|.
T Consensus 154 ~pyi~~~~~d~~~~i~~ff~g~~~ 177 (318)
T 2d81_A 154 SPYISNCNYDGAGAALKWIYGSLN 177 (318)
T ss_dssp TTCEEECSSCHHHHHHHHHHSSCC
T ss_pred CCcccCCCChHHHHHHHHHhccCC
Confidence 25667789999987654
No 219
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.45 E-value=6.9e-13 Score=137.36 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=80.9
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++..... + +++.|.||++||.+++... |... ...|++ +|.|+++|+||.|.... .....
T Consensus 15 ~g~~l~y~~~---G---~g~~~pvvllHG~~~~~~~--w~~~-~~~L~~-~~~via~Dl~G~G~S~~--------~~~~~ 76 (316)
T 3afi_E 15 LGSSMAYRET---G---AQDAPVVLFLHGNPTSSHI--WRNI-LPLVSP-VAHCIAPDLIGFGQSGK--------PDIAY 76 (316)
T ss_dssp TTEEEEEEEE---S---CTTSCEEEEECCTTCCGGG--GTTT-HHHHTT-TSEEEEECCTTSTTSCC--------CSSCC
T ss_pred CCEEEEEEEe---C---CCCCCeEEEECCCCCchHH--HHHH-HHHHhh-CCEEEEECCCCCCCCCC--------CCCCC
Confidence 6766654432 2 1333589999998776544 4433 355665 79999999999654321 11235
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
+++++.+.+..+++. ...+++.|+|+|+||.+++.++.++|++++++|+..+
T Consensus 77 ~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 77 RFFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 677777777666665 2346899999999999999999999999999988764
No 220
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.45 E-value=4.4e-11 Score=124.31 Aligned_cols=282 Identities=10% Similarity=0.018 Sum_probs=158.4
Q ss_pred eCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy4818 99 QENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 178 (734)
Q Consensus 99 ~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g 178 (734)
+++++|..-... ..+.+.+..+++....+... .... .++|||||++|+++.... ..|+++|++++
T Consensus 8 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~------~~~~-~~~~s~dg~~l~~~~~~~----~~i~~~d~~~~ 72 (331)
T 3u4y_A 8 TSNFGIVVEQHL----RRISFFSTDTLEILNQITLG------YDFV-DTAITSDCSNVVVTSDFC----QTLVQIETQLE 72 (331)
T ss_dssp CCCEEEEEEGGG----TEEEEEETTTCCEEEEEECC------CCEE-EEEECSSSCEEEEEESTT----CEEEEEECSSS
T ss_pred CCCEEEEEecCC----CeEEEEeCcccceeeeEEcc------CCcc-eEEEcCCCCEEEEEeCCC----CeEEEEECCCC
Confidence 344555443222 23555565555544444321 1234 899999999887766433 37999999999
Q ss_pred Cc-ccccccccccCe-eEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEE
Q psy4818 179 KD-YPEVLKNVKFPS-ISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 256 (734)
Q Consensus 179 ~~-~~~~~~~~~~~~-~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 256 (734)
+. ............ ++|+|||+.|+ +.... .....|+++++.++.. +..+.... ....+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~------------~~~~~i~v~d~~~~~~--~~~~~~~~---~~~~~~ 134 (331)
T 3u4y_A 73 PPKVVAIQEGQSSMADVDITPDDQFAV-TVTGL------------NHPFNMQSYSFLKNKF--ISTIPIPY---DAVGIA 134 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEE-ECCCS------------SSSCEEEEEETTTTEE--EEEEECCT---TEEEEE
T ss_pred ceeEEecccCCCCccceEECCCCCEEE-EecCC------------CCcccEEEEECCCCCe--EEEEECCC---CccceE
Confidence 86 332222222345 89999999988 43211 1223799999876542 22222222 235789
Q ss_pred EecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 257 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 257 ~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
|||||++|++.... ....|++|+++.. ..+.. .. ...+........ .|+|||+++|+.... ...|.++|+
T Consensus 135 ~spdg~~l~~~~~~--~~~~i~~~~~~~~--g~~~~-~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~ 205 (331)
T 3u4y_A 135 ISPNGNGLILIDRS--SANTVRRFKIDAD--GVLFD-TG-QEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILET 205 (331)
T ss_dssp ECTTSSCEEEEEET--TTTEEEEEEECTT--CCEEE-EE-EEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEEC
T ss_pred ECCCCCEEEEEecC--CCceEEEEEECCC--CcEee-cC-CccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEEC
Confidence 99999998766443 1123788887651 11110 00 111211111222 399999988877654 346999999
Q ss_pred CCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCce--eeeeCC----C---CceEEeeccC
Q psy4818 336 NNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKR--LHSFPL----D---LGQITHISGR 405 (734)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~--~~~l~~----~---~g~v~~~~~~ 405 (734)
+++...+....++.. .....+.+. +++.+++... +...|++||+++|+. +..+.. . ......+.++
T Consensus 206 ~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 281 (331)
T 3u4y_A 206 QNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALN 281 (331)
T ss_dssp SSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEEC
T ss_pred CCCcccceeeeccCC--CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEEC
Confidence 876520002233332 222334444 4344555432 345799999988875 222211 1 1111246778
Q ss_pred cccceEEEEEecCCCCceEEEEeC
Q psy4818 406 RKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 406 ~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|++.++++... -..+.++|+
T Consensus 282 pdg~~l~v~~~~---~~~v~v~d~ 302 (331)
T 3u4y_A 282 KTETKLFISANI---SRELKVFTI 302 (331)
T ss_dssp TTSSEEEEEETT---TTEEEEEET
T ss_pred CCCCEEEEecCC---CCcEEEEEe
Confidence 999888776543 247899998
No 221
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.44 E-value=9.8e-13 Score=133.34 Aligned_cols=220 Identities=13% Similarity=0.027 Sum_probs=134.3
Q ss_pred cEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--------ccCCCCCchhhh-cc
Q psy4818 470 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--------RGGGELGEDWHN-AG 540 (734)
Q Consensus 470 ~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------rG~~~~g~~~~~-~~ 540 (734)
..+++.|++|++. .++.|+||.+||+. +. + .+||+|+.+|+ ||+.++|. |+. .+
T Consensus 90 ~~~~~~i~lP~~~--~~p~Pvii~i~~~~-------~~------~-~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 90 ISFTVTITYPSSG--TAPYPAIIGYGGGS-------LP------A-PAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEECCSSS--CSSEEEEEEETTCS-------SC------C-CTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eEEEEEEECCCCC--CCCccEEEEECCCc-------cc------c-CCCeEEEEecccccccccCCCCcccee-cccccC
Confidence 3578899999863 47789999998841 11 2 35999999998 67667776 442 22
Q ss_pred c-cccCCCc--hhHHHHHHHHHHHcC--CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc-----
Q psy4818 541 R-LLKKQNC--FDDFQAAAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----- 610 (734)
Q Consensus 541 ~-~~~~~~~--~~D~~~~~~~l~~~~--~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----- 610 (734)
. ..++... .-|+..+++||..+. .+|++||+|+|+|+||..++++++..+ +++++|+.++..+-....+
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~~~~R~~~~~ 231 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGSACWRISDYL 231 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTTSCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCchhhhhhhhhh
Confidence 1 1122221 247889999999987 899999999999999999999999876 7899999887654221111
Q ss_pred ----ccc-------C-ccccc----ccCCCCCHHHHHHHHhCCccCC--CCCCCCCccCC-cEEEEecCCCCCCCChHHH
Q psy4818 611 ----FTI-------A-YYSES----EFGSPNNKTHFHNLLSYSPLHN--IKVPPNNTQYP-ATLVLTGDHDDRVPPLHSY 671 (734)
Q Consensus 611 ----~~~-------~-~~~~~----~~g~~~~~~~~~~~~~~sp~~~--~~~p~~~~~~P-~~Li~~g~~D~~v~~~~~~ 671 (734)
..+ + ..|+. .|... . ..-|+.+ +-. .-+| |+||+.| +|..+++.-..
T Consensus 232 ~~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~--~-------~~lP~D~h~L~A----LiAPRPllv~~g-~D~w~~~~g~~ 297 (375)
T 3pic_A 232 KSQGANIQTASEIIGEDPWFSTTFNSYVNQ--V-------PVLPFDHHSLAA----LIAPRGLFVIDN-NIDWLGPQSCF 297 (375)
T ss_dssp HHTTCCCCCHHHHTTTCSCSCGGGGGTTTC--G-------GGSSCCHHHHHH----TSTTSEEEEECC-CCGGGCHHHHH
T ss_pred cccCccccccccccCcccccccchhhhccc--c-------cccCcCHHHHHH----HhCCceEEEecC-CCcccCcHHHH
Confidence 000 0 12211 11100 0 0012111 000 1111 4999999 99999988766
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC-chHHhHHHHHHHHHHHHHHcCCC
Q psy4818 672 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT-PLMKSIEEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 672 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~~~ 728 (734)
..+.+++..++... ....+.+.. .+||+... +... ...+++||.++|...
T Consensus 298 ~~~~~a~~VY~~lG-~~d~~~~~~--~ggH~Hc~fp~~~----~~~~~~F~~k~L~~~ 348 (375)
T 3pic_A 298 GCMTAAHMAWQALG-VSDHMGYSQ--IGAHAHCAFPSNQ----QSQLTAFVQKFLLGQ 348 (375)
T ss_dssp HHHHHHHHHHHHTT-CGGGEEEEC--CSCCSTTCCCGGG----HHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHcC-CccceEEEe--eCCCccccCCHHH----HHHHHHHHHHHhCCC
Confidence 66666655443321 122355543 34553321 2121 245789999999764
No 222
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.44 E-value=3.9e-11 Score=125.63 Aligned_cols=249 Identities=9% Similarity=0.045 Sum_probs=151.6
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCc-eEEEEEEECCCCCccc----cc-ccccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYP----EV-LKNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~-~~~l~v~dl~~g~~~~----~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
..+..++|||||++|+-..+..+.- ...+++++........ .. .....+..++|+||+ .|+....+
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~d------- 102 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDS------- 102 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETT-------
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECC-------
Confidence 3478999999999998666543321 1345555432221111 00 111123678999996 56544432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
..|.+|++.+++......+....+...+..++|||||++|+... ....|.+||+.++ ..
T Consensus 103 ---------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs----~d~~i~iwd~~~~--------~~ 161 (344)
T 4gqb_B 103 ---------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS----KDICIKVWDLAQQ--------VV 161 (344)
T ss_dssp ---------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTT--------EE
T ss_pred ---------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe----CCCeEEEEECCCC--------cE
Confidence 26889999877543322222223344677899999999987433 2257999999883 12
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 373 (734)
...+..+....... |++++..+++.... +..|.+||+.+++. ...+........+..+.+. +++.++++...+
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEET---TSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeecc---ccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 22233333333333 88998876665443 34588999987652 2333323223334444443 345677776666
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..|++||+.+++.+..+......|..+.++|++..++++.+... .+.++|+
T Consensus 237 --g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~---~i~vwd~ 287 (344)
T 4gqb_B 237 --GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC---SLAVLDS 287 (344)
T ss_dssp --SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS---CEEEECT
T ss_pred --CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC---eEEEEEC
Confidence 47999999889887888777677888999999877777666543 6899998
No 223
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.43 E-value=2.9e-13 Score=135.61 Aligned_cols=199 Identities=14% Similarity=0.033 Sum_probs=116.1
Q ss_pred Cc-EEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 488 NP-VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 488 ~P-~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
.| .||++||..+... .|.. ....|++ +|.|+++|+||.|..... ...+++++ ++.+.+. ++
T Consensus 12 g~~~vvllHG~~~~~~--~w~~-~~~~L~~-~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~~--l~ 73 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAE--VWRC-IDEELSS-HFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQQ--AP 73 (258)
T ss_dssp CSSEEEEECCTTCCGG--GGGG-THHHHHT-TSEEEEECCTTSTTCCSC---------CCCCHHHH---HHHHHTT--SC
T ss_pred CCCeEEEECCCCCChH--HHHH-HHHHhhc-CcEEEEeeCCCCCCCCCC---------CCcCHHHH---HHHHHHH--hC
Confidence 35 8999999765543 3443 3456764 999999999996543311 12344443 4455443 34
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhcccccc-ccC-------------------cccc--cccCCC
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-TIA-------------------YYSE--SEFGSP 624 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~~~-------------------~~~~--~~~g~~ 624 (734)
+++.|+|||+||.+++.++.++|++++++|+..+.......... ... ..+. ..++.+
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTE 152 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTST
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 78999999999999999999999999999987653211100000 000 0000 001111
Q ss_pred CCHHHHH----------------------HHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q psy4818 625 NNKTHFH----------------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 682 (734)
Q Consensus 625 ~~~~~~~----------------------~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~ 682 (734)
...+... .+........+.. +++| +|+++|++|..+++..+..+.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~l~i~G~~D~~~~~~~~~~~~~~~~---- 223 (258)
T 1m33_A 153 TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQN----VSMP-FLRLYGYLDGLVPRKVVPMLDKLWP---- 223 (258)
T ss_dssp THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGG----CCSC-EEEEEETTCSSSCGGGCC-CTTTCT----
T ss_pred cchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhh----CCCC-EEEEeecCCCCCCHHHHHHHHHhCc----
Confidence 1111111 1111111112222 6777 9999999999999876655443322
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHH
Q psy4818 683 SLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMK 723 (734)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 723 (734)
..++++++++||....... .+..+.+.+||.+
T Consensus 224 -------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 255 (258)
T 1m33_A 224 -------HSESYIFAKAAHAPFISHP--AEFCHLLVALKQR 255 (258)
T ss_dssp -------TCEEEEETTCCSCHHHHSH--HHHHHHHHHHHTT
T ss_pred -------cceEEEeCCCCCCccccCH--HHHHHHHHHHHHh
Confidence 2478889999998643322 3555667778753
No 224
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.41 E-value=2.1e-11 Score=141.31 Aligned_cols=256 Identities=9% Similarity=-0.009 Sum_probs=159.9
Q ss_pred CCcE-EeCCeEEEEEEcCCCCeeEEEEEeCCCC-CeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEE
Q psy4818 94 SAPQ-RQENNYFYFHNKGLQNHSILYVQRNLTG-STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 171 (734)
Q Consensus 94 ~~p~-~~g~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~ 171 (734)
..++ |||.+++|.....+..+..||+++..++ + .+.+ .+ ....++++|||||+.|+|+.........+||
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~--~l~~--~~----~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ--TIAD--KV----SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC--CCCC--CE----EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE--eCCc--cc----cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 3456 8999999999987777788999987666 4 1211 11 1124579999999999999875443446899
Q ss_pred EEECCCCCccc-cc---ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCC--eeEEec
Q psy4818 172 IKDVDTGKDYP-EV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD--IPVVEF 245 (734)
Q Consensus 172 v~dl~~g~~~~-~~---~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~--~~v~~~ 245 (734)
++++.++.... .. .......++.|||||++|+|..... ...+||++++.++..+. +.+...
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~l~~~d~~~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-------------ETAEVHLLDLRKGNAHNTLEIVRPR 317 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS-------------SCEEEEEEESSSCTTCCCEEESSCC
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC-------------CCceEEEEECCCCCCCceeEEeecC
Confidence 99998875321 11 1111235789999999999988532 24589999998763322 223222
Q ss_pred CCCCeeEEEEEEecC---CcEEEEEEecC-CCCceEEEEeCCCCCCCcccCCCCcee-eeccccc-eEEEEEecCCeEEE
Q psy4818 246 PNGRSLGLHSEVTDC---GRYLLVSTSNN-TQGSDLHYFDLHSLPDGKISGKFPLKT-VIPGMDH-HHEIIANNGPELIV 319 (734)
Q Consensus 246 ~~~~~~~~~~~~SpD---G~~l~~~~~~~-~~~~~i~~~d~~~~~~~~l~~~~~~~~-l~~~~~~-~~~~~s~dg~~l~~ 319 (734)
.. .+.|++| |+.|+|.++.. .....|+.++++++ ..++. ++..... ....++++++.|++
T Consensus 318 ~~------~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~--------~~~~~~li~~~~~~~l~~~~~~~~~lv~ 383 (751)
T 2xe4_A 318 EK------GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP--------SDWSHVLVDHSEDVFMESIAVRSNYLVV 383 (751)
T ss_dssp CT------TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST--------TCCCCEEECCCSSEEEEEEEECSSEEEE
T ss_pred CC------CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc--------ccceeeEECCCCCcEEEEEEEECCEEEE
Confidence 21 1234455 89998888764 34579999998751 12344 4433222 22347778889988
Q ss_pred EeCCCCCCceEEEEec-------CCCCCCCceEeecCCCCceeEEEE-----EeeCCEEEEEEEeCC-ceeEEEEECCCC
Q psy4818 320 KTTKNAPKGKVVTINL-------NNPCEKNWKTLIPEDENRTLDVVA-----AVANNKLIVHYIQNV-RSVMDLHDLNTG 386 (734)
Q Consensus 320 ~s~~~~~~~~l~~~d~-------~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~-~~~l~~~dl~~g 386 (734)
....++ ..+|+++++ +++. ..+.+......... .+. ..+++.+++...... .+.++.+|+.+|
T Consensus 384 ~~~~~g-~~~l~~~dl~~~~~~~~~g~--~~~~l~l~~~~~~~-~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 384 AGRRAG-LTRIWTMMADSQDGVFKAGT--GLREVVMEEPIFTV-HLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp EEEETT-EEEEEEEECCTTTSCCCTTT--CCEECCCCCSSCEE-EECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred EEEeCC-EEEEEEEecccccccccCCc--cceEECCCCceeEE-EeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 877654 557999996 3332 02444222212222 221 123356776665543 458999999777
Q ss_pred ce
Q psy4818 387 KR 388 (734)
Q Consensus 387 ~~ 388 (734)
+.
T Consensus 460 ~~ 461 (751)
T 2xe4_A 460 SR 461 (751)
T ss_dssp CE
T ss_pred cE
Confidence 64
No 225
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.41 E-value=1.3e-10 Score=125.79 Aligned_cols=279 Identities=12% Similarity=0.038 Sum_probs=169.7
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
++.+++....++ .+++.+..++.....+....+ .++...+..++|+|||+.++-.. ....|++||+++++
T Consensus 133 ~~~~~~~~~~~~----~i~~~d~~~g~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~-----~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLEDE----GMDVLDINSGQTVRLSPPEKY-KKKLGFVETISIPEHNELWVSQM-----QANAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTSS----SEEEEETTTCCEEEECCCHHH-HTTCCEEEEEEEGGGTEEEEEEG-----GGTEEEEEETTTCC
T ss_pred CCeEEEEeCCCC----eEEEEECCCCeEeeecCcccc-cccCCceeEEEEcCCCEEEEEEC-----CCCEEEEEECCCce
Confidence 556666543321 245555544554444333222 12334678899999998765432 22479999999987
Q ss_pred cccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEe
Q psy4818 180 DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 258 (734)
Q Consensus 180 ~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S 258 (734)
.+.... .......++|+|||+.++++... ...|+++++.++. .+..... ......+.|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~i~~~d~~~~~----~~~~~~~-~~~~~~~~~~ 262 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWI---------------SEDISVIDRKTKL----EIRKTDK-IGLPRGLLLS 262 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETT---------------TTEEEEEETTTTE----EEEECCC-CSEEEEEEEC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecC---------------CCcEEEEECCCCc----EEEEecC-CCCceEEEEc
Confidence 643222 22234678999999988877532 2279999987653 2222222 2246789999
Q ss_pred cCCcEEEEEEecCC----CCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEE
Q psy4818 259 DCGRYLLVSTSNNT----QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTI 333 (734)
Q Consensus 259 pDG~~l~~~~~~~~----~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 333 (734)
|||++|++...... ....|++||+.++. ............. .|+|+|+.+++.... ...|.++
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~ 330 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEK---------LIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVY 330 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---------EEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCc---------EEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEE
Confidence 99999987764322 13589999998731 1222221122222 389999988887654 3479999
Q ss_pred ecCCCCCCCceEeecCCCCceeEEEEEeeCC-EEEEEEEeCCc------------eeEEEEECCCCceeeeeCCCCceEE
Q psy4818 334 NLNNPCEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNVR------------SVMDLHDLNTGKRLHSFPLDLGQIT 400 (734)
Q Consensus 334 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~------------~~l~~~dl~~g~~~~~l~~~~g~v~ 400 (734)
|++++. ....++.. ..+..+.+..++ .+++....... ..|++||+.+++.+..+... ..+.
T Consensus 331 d~~~~~---~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~ 404 (433)
T 3bws_A 331 DLKEKK---VQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPT 404 (433)
T ss_dssp ETTTTE---EEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEE
T ss_pred ECCCCc---EEEEecCC--CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCc
Confidence 998654 23344433 233455554434 45554433221 38999999888877766543 3466
Q ss_pred eeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 401 HISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 401 ~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+.++++++.+++..+.. ..+++|++
T Consensus 405 ~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 405 GLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp EEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred eEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 788899988776654322 46888877
No 226
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.41 E-value=4.3e-13 Score=137.80 Aligned_cols=104 Identities=16% Similarity=0.206 Sum_probs=76.2
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhc--CeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 562 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 562 (734)
.+..|.||++||..+... .|.. +...|+++ ||.|+++|+||.|. ..... ...++|+.+.+..+.+.
T Consensus 33 ~~~~~~vvllHG~~~~~~--~~~~-~~~~L~~~~~g~~vi~~D~~G~G~---s~~~~------~~~~~~~~~~l~~~~~~ 100 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSY--SFRH-LLEYINETHPGTVVTVLDLFDGRE---SLRPL------WEQVQGFREAVVPIMAK 100 (302)
T ss_dssp --CCCCEEEECCTTCCGG--GGHH-HHHHHHHHSTTCCEEECCSSCSGG---GGSCH------HHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEECCCCCChh--HHHH-HHHHHHhcCCCcEEEEeccCCCcc---chhhH------HHHHHHHHHHHHHHhhc
Confidence 355688999999766543 3443 45667777 89999999999543 21111 13467777777777665
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhcCCC-ceeEEEEcCCcc
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGAL 603 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~ 603 (734)
. .+++.++|||+||.++..++.++|+ .++++|+.++..
T Consensus 101 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 101 A---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp C---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred C---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 4 4689999999999999999999999 699999887654
No 227
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.41 E-value=1e-11 Score=127.08 Aligned_cols=117 Identities=11% Similarity=0.061 Sum_probs=81.2
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++..... +..|.||++||.+++.. .|.. ....|++ .|.|+++|.||.|..... .......
T Consensus 16 ~~g~~l~y~~~--------G~g~~lvllHG~~~~~~--~w~~-~~~~L~~-~~~via~Dl~G~G~S~~~----~~~~~~~ 79 (294)
T 1ehy_A 16 LPDVKIHYVRE--------GAGPTLLLLHGWPGFWW--EWSK-VIGPLAE-HYDVIVPDLRGFGDSEKP----DLNDLSK 79 (294)
T ss_dssp CSSCEEEEEEE--------ECSSEEEEECCSSCCGG--GGHH-HHHHHHT-TSEEEEECCTTSTTSCCC----CTTCGGG
T ss_pred ECCEEEEEEEc--------CCCCEEEEECCCCcchh--hHHH-HHHHHhh-cCEEEecCCCCCCCCCCC----ccccccC
Confidence 46777765432 13478999999876554 3444 3466775 699999999996654321 0000012
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
.+++++.+.+..++++ ...+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 80 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 80 YSLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp GCHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 4566777666666665 2345799999999999999999999999999998775
No 228
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=5.8e-10 Score=117.21 Aligned_cols=248 Identities=7% Similarity=-0.011 Sum_probs=155.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..+..++|||||++|+.... . ..|++||+.+++.+...........+.|+||++.|+....+. .
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------~ 138 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSA-D----YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNV-----------M 138 (369)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCB-----------T
T ss_pred CcEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCc-----------c
Confidence 44788999999999986653 2 379999999998654333333457899999999998877531 1
Q ss_pred cCCcEEEEEECCCCCCCCee---------EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 222 HMGQKIYYHVLGTEQDKDIP---------VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~---------v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
.....|+++++.+....... .............+.|+|||++|+.... ...|++||+.++ .
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~-~----- 208 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK----DGKISKYDVSNN-Y----- 208 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET----TSEEEEEETTTT-T-----
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC----CCEEEEEECCCC-c-----
Confidence 12236777776654322111 1111111115667899999999886432 258999999871 1
Q ss_pred CCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEE
Q psy4818 293 KFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 293 ~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 371 (734)
.....+.......... |+|+++.|+..+. +..|..+|+.++. ....+... ..+..+.+..++..++...
T Consensus 209 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~---~~~~~~~~--~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 209 -EYVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTLQ---VLKKYETD--CPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp -EEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC---EEEEEECS--SCEEEEEECSSSSEEEEEE
T ss_pred -EeEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCCc---eeeeecCC--CCceeEEecCCCceEEEee
Confidence 1122222222233333 8999988876554 3469999998765 23333332 3334444444344444443
Q ss_pred eCC------------ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 372 QNV------------RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 372 ~~~------------~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++ ...+.+||+.+++.+..+....+.+..+.++++++.++. .+.. ..+..|++
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~d---g~v~iw~~ 344 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS-GGED---GFIRLHHF 344 (369)
T ss_dssp CCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE-EETT---SEEEEEEE
T ss_pred cCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE-EcCC---CeEEEEEC
Confidence 332 227899999888887777766677888999998865543 3332 47888888
No 229
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.40 E-value=4.1e-12 Score=130.06 Aligned_cols=222 Identities=14% Similarity=-0.009 Sum_probs=132.7
Q ss_pred EEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEec--------ccCCCCCchhhhc-cc
Q psy4818 471 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--------RGGGELGEDWHNA-GR 541 (734)
Q Consensus 471 ~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------rG~~~~g~~~~~~-~~ 541 (734)
.+.+.|++|++ .++.|+||.+||+. . .+ .+||+++.+|+ +|+.++|. |+.. +.
T Consensus 124 sf~~~i~lP~g---~~P~Pvii~~~~~~-~------------~~-~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 124 SFSASIRKPSG---AGPFPAIIGIGGAS-I------------PI-PSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEECCSS---SCCEEEEEEESCCC-S------------CC-CTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEECCCC---CCCccEEEEECCCc-c------------cc-CCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 46899999976 47789999988641 1 02 35999999998 55666776 4432 11
Q ss_pred -cccCCCc--hhHHHHHHHHHHH----cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcchhccccc----
Q psy4818 542 -LLKKQNC--FDDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK---- 610 (734)
Q Consensus 542 -~~~~~~~--~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---- 610 (734)
..++... .-++..+++||.. +..+|++||+|+|+|+||..++++++..+ +++++|+.++..+-....+
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~~~~R~~~~ 264 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGAACWRISDQ 264 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTTSCHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCchhhhhhchh
Confidence 1122111 2478889999998 78899999999999999999999999876 7899999987654322111
Q ss_pred -----ccc-------C-ccccc----ccCCCCCHHHHHHHHhCCccCCCCCCCCCccCC-cEEEEecCCCCCCCChHHHH
Q psy4818 611 -----FTI-------A-YYSES----EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYP-ATLVLTGDHDDRVPPLHSYK 672 (734)
Q Consensus 611 -----~~~-------~-~~~~~----~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P-~~Li~~g~~D~~v~~~~~~~ 672 (734)
..+ + ..|+. .|.+ +. ..-|+.+-.-. ..-.| |+||+.| +|..+++.....
T Consensus 265 ~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~--~~-------~~LPfD~heL~--ALiAPRPlLv~~g-~D~w~~p~g~~~ 332 (433)
T 4g4g_A 265 QKAAGANIQTAAQIITENPWFSRNFDPHVN--SI-------TSVPQDHHLLA--ALIVPRGLAVFEN-NIDWLGPVSTTG 332 (433)
T ss_dssp HHHTTCCCCCHHHHTTTCCCSCTTTGGGTT--CG-------GGSSCCGGGHH--HHHTTSEEEEEEC-CCTTTCHHHHHH
T ss_pred hcccCcchhhhhcccCCccccchhhHhhcc--cc-------ccCCcCHHHHH--HhhCCceEEEecC-CCCcCCcHHHHH
Confidence 000 0 12210 1110 00 00122211000 01111 4899999 999998876665
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCchHHhHHHHHHHHHHHHHHcCCCC
Q psy4818 673 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTPLMKSIEEMTDIYVFLMKSLGLKY 729 (734)
Q Consensus 673 ~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 729 (734)
.+.+++..++..+ ....+.+...++.+|... +... ...+++||.++|....
T Consensus 333 a~~aa~~VY~~lG-a~d~l~~~~~ggH~Hc~f-p~~~----r~~~~~F~~k~Lkg~~ 383 (433)
T 4g4g_A 333 CMAAGRLIYKAYG-VPNNMGFSLVGGHNHCQF-PSSQ----NQDLNSYINYFLLGQG 383 (433)
T ss_dssp HHHHHHHHHHHHT-CGGGEEEEECCSSCTTCC-CGGG----HHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHcC-CccceEEEeeCCCCcccC-CHHH----HHHHHHHHHHHhCCCC
Confidence 5555544332211 123455555444455321 1111 2356899999996643
No 230
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.40 E-value=3e-11 Score=126.45 Aligned_cols=237 Identities=6% Similarity=-0.003 Sum_probs=150.8
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-----cccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
.+..++||||++ |+.... . ..|++||+++++.+.... ....+..++|||||+.|+....+.
T Consensus 84 ~v~~~~~s~d~~-l~~~s~-d----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-------- 149 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVASD-S----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-------- 149 (344)
T ss_dssp CEEEEEEETTTE-EEEEET-T----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------
T ss_pred CEEEEEEeCCCe-EEEEEC-C----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------
Confidence 377899999975 443332 2 369999999987543211 112346889999999888766433
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|.+|++.++. .+.....+...+..+.|+||++.++++.+. ...|.+||+.++. ...
T Consensus 150 --------~i~iwd~~~~~----~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~--------~~~ 206 (344)
T 4gqb_B 150 --------CIKVWDLAQQV----VLSSYRAHAAQVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPK--------PAS 206 (344)
T ss_dssp --------CEEEEETTTTE----EEEEECCCSSCEEEEEECSSCTTEEEEEET---TSCEEEEETTSSS--------CEE
T ss_pred --------eEEEEECCCCc----EEEEEcCcCCceEEEEecCCCCCceeeecc---ccccccccccccc--------eee
Confidence 68889988753 233323344466789999999877665543 2579999998732 122
Q ss_pred eeecccc--ceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeC
Q psy4818 298 TVIPGMD--HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQN 373 (734)
Q Consensus 298 ~l~~~~~--~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 373 (734)
.+..... .... .|+|++..+++.... +..|.++|+.+++. ...+..+. ..+..+.+. ++..++++...+
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~~~~--~~~~~~h~--~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKSTSC--VLSSAVHS--QCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC--C--CEEEECCS--SCEEEEEECSSSSCCEEEEETT
T ss_pred eeecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCCCcE--EEEEcCCC--CCEEEEEEccCCCeEEEEEeCC
Confidence 2211111 1222 388877766655443 34699999987652 34443333 344555554 434677777666
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..|++||+.+++.. .+....+.|.++.++|++..++.+.+... .+..+++
T Consensus 280 --~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~---~v~~w~v 329 (344)
T 4gqb_B 280 --CSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDH---QVVHHVV 329 (344)
T ss_dssp --SCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTS---CEEEEEC
T ss_pred --CeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCC---eEEEEEC
Confidence 46899999877753 45555677889999999988877766543 6888888
No 231
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.40 E-value=8.3e-11 Score=122.15 Aligned_cols=243 Identities=14% Similarity=0.046 Sum_probs=144.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cc-----cccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KN-----VKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~-----~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
...++|||||++++++.... ..|+++|+.+++.+.... .. .....++|+|||+.|++........
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----- 106 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE----- 106 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC-----
T ss_pred ccceEEcCCCCEEEEEeCCC----CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc-----
Confidence 45789999999988776433 369999999998643221 11 1346799999999998875321000
Q ss_pred ccccc--CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 218 ETTAH--MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 218 ~~~~~--~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.... ....|+++++.++.. +..+.... ....+.|||||++|++. ...|+++|+.++.
T Consensus 107 -~~~~~~~~~~i~v~d~~~~~~--~~~~~~~~---~~~~~~~s~dg~~l~~~------~~~i~~~d~~~~~--------- 165 (337)
T 1pby_B 107 -LTHFEVQPTRVALYDAETLSR--RKAFEAPR---QITMLAWARDGSKLYGL------GRDLHVMDPEAGT--------- 165 (337)
T ss_dssp -SSCEEECCCEEEEEETTTTEE--EEEEECCS---SCCCEEECTTSSCEEEE------SSSEEEEETTTTE---------
T ss_pred -cccccccCceEEEEECCCCcE--EEEEeCCC---CcceeEECCCCCEEEEe------CCeEEEEECCCCc---------
Confidence 0000 235799999876532 22222222 22357899999998876 1479999998732
Q ss_pred ceeeecccc-ceEEEEEecCCeEEEEeCCCCC--------------------CceEEEEecCCCCCCCceEeecCCCCce
Q psy4818 296 LKTVIPGMD-HHHEIIANNGPELIVKTTKNAP--------------------KGKVVTINLNNPCEKNWKTLIPEDENRT 354 (734)
Q Consensus 296 ~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~--------------------~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 354 (734)
....+.... .....|+|||+.+++....... ...|+.+|+++++ ...+........
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~ 242 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE---MAMREVRIMDVF 242 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC---EEEEEEEECSSC
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC---ceEeecCCCCCc
Confidence 111111111 0111378998877654432210 0157899988765 221111111122
Q ss_pred eEEEEEeeCC-EEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 355 LDVVAAVANN-KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 355 ~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+.+..++ .+++. ...|++||+++++.+..+..+. .+.++.++++++.+++. + . ...++++|+
T Consensus 243 ~~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-~-~--~~~i~v~d~ 308 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLG-G-A--LGDLAAYDA 308 (337)
T ss_dssp EEEEEECTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEE-S-B--SSEEEEEET
T ss_pred eeeEEECCCCCEEEEe-----CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEE-c-C--CCcEEEEEC
Confidence 3344444434 55544 2579999998888766665442 34467788898877765 2 2 367999999
No 232
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.39 E-value=2.1e-12 Score=129.44 Aligned_cols=116 Identities=15% Similarity=0.070 Sum_probs=83.3
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
+|.++.....-+ ...|+||++||..+.... |.. ....|++ +|.|+++|+||.|..... ....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~~~~--~~~-~~~~L~~-~~~v~~~D~~G~G~S~~~--------~~~~ 68 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQDHRL--FKN-LAPLLAR-DFHVICPDWRGHDAKQTD--------SGDF 68 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCCGGG--GTT-HHHHHTT-TSEEEEECCTTCSTTCCC--------CSCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCcHhH--HHH-HHHHHHh-cCcEEEEccccCCCCCCC--------cccc
Confidence 666665543322 236899999998766543 444 3466664 799999999996643311 2334
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCCcc
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGAL 603 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~ 603 (734)
.++++.+.+..+++. .+.+++.++|||+||++++.++.++ |++++++|+..|..
T Consensus 69 ~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 69 DSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred CHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 567777766666655 2445899999999999999999999 99999999988755
No 233
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.38 E-value=2.2e-12 Score=133.62 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=80.5
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++.... .+ .++.|.||++||..+.... |.. ....|++ .|.|+++|+||.|..... ....
T Consensus 28 ~~g~~l~y~~---~G---~g~~~~vvllHG~~~~~~~--w~~-~~~~L~~-~~~via~Dl~GhG~S~~~-------~~~~ 90 (318)
T 2psd_A 28 VLDSFINYYD---SE---KHAENAVIFLHGNATSSYL--WRH-VVPHIEP-VARCIIPDLIGMGKSGKS-------GNGS 90 (318)
T ss_dssp ETTEEEEEEE---CC---SCTTSEEEEECCTTCCGGG--GTT-TGGGTTT-TSEEEEECCTTSTTCCCC-------TTSC
T ss_pred eCCeEEEEEE---cC---CCCCCeEEEECCCCCcHHH--HHH-HHHHhhh-cCeEEEEeCCCCCCCCCC-------CCCc
Confidence 3676665432 12 2344689999998765543 333 2345664 689999999996643211 1123
Q ss_pred CchhHHHHHHHHHHHcCCCCC-CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcC
Q psy4818 547 NCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILV 600 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 600 (734)
..++++.+.+..+++. .+. +++.|+|||+||.+++.++.++|++++++|+..
T Consensus 91 ~~~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~ 143 (318)
T 2psd_A 91 YRLLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHME 143 (318)
T ss_dssp CSHHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEec
Confidence 4677888777777765 344 689999999999999999999999999999854
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.38 E-value=1.2e-10 Score=123.13 Aligned_cols=207 Identities=12% Similarity=0.049 Sum_probs=130.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
+..++|||||++||.+.. +....|++||+++++.+........+..++|||||+.|+....+
T Consensus 136 ~~~v~fSpDg~~la~as~---~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~--------------- 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASS---KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS--------------- 197 (365)
T ss_dssp EEEEEECTTSSCEEEEES---CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS---------------
T ss_pred EEEEEEcCCCCEEEEEEC---CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce---------------
Confidence 567899999999988763 33468999999999865433333345789999999998877532
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
.+.++...++.. +.......+...+..+.|||||++++...........++.|++....... .....+....
T Consensus 198 --~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~ 269 (365)
T 4h5i_A 198 --SLEVISTVTGSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRF 269 (365)
T ss_dssp --CEEEEETTTCCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSC
T ss_pred --eEEEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCC
Confidence 355555554431 11111222344667899999999998776554433567888876521100 0011122222
Q ss_pred cceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEE
Q psy4818 304 DHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 382 (734)
Q Consensus 304 ~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~d 382 (734)
...... |+|||+.|+..+.. ..|.+||+.+++. +..+... ....+..+.+..++.++++.+.| ..|.+|+
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D----~~V~iwd~~~~~~--~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D--~tvrvw~ 340 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASND----NSIALVKLKDLSM--SKIFKQA-HSFAITEVTISPDSTYVASVSAA--NTIHIIK 340 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETT----SCEEEEETTTTEE--EEEETTS-SSSCEEEEEECTTSCEEEEEETT--SEEEEEE
T ss_pred CCeEeEEECCCCCceEEEcCC----CEEEEEECCCCcE--EEEecCc-ccCCEEEEEECCCCCEEEEEeCC--CeEEEEE
Confidence 333343 99999988766553 4599999987651 2223222 23456667666667888888777 4788898
Q ss_pred CCC
Q psy4818 383 LNT 385 (734)
Q Consensus 383 l~~ 385 (734)
+..
T Consensus 341 ip~ 343 (365)
T 4h5i_A 341 LPL 343 (365)
T ss_dssp CCT
T ss_pred cCC
Confidence 853
No 235
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.38 E-value=4.4e-12 Score=127.54 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=72.2
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||..+... .|.. ....|++.||.|+++|+||.|.... . ...+++++.+.+..+++.-..+.
T Consensus 16 ~~~vvllHG~~~~~~--~w~~-~~~~L~~~~~~vi~~Dl~GhG~S~~---~------~~~~~~~~a~~l~~~l~~l~~~~ 83 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA--DWQP-VLSHLARTQCAALTLDLPGHGTNPE---R------HCDNFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp BCEEEEECCTTCCGG--GGHH-HHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTT
T ss_pred CCcEEEEcCCCCCHH--HHHH-HHHHhcccCceEEEecCCCCCCCCC---C------CccCHHHHHHHHHHHHHHhCcCC
Confidence 488999999866554 3443 4466764699999999999664331 1 11346777776666666533332
Q ss_pred CcEEEEEcChHHHHHHH---HHhcCCCceeEEEEcCCc
Q psy4818 568 KYITIMGGSNGGLLVGA---CLNQRPELYGAALILVGA 602 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~---~~~~~p~~~~a~v~~~~~ 602 (734)
.++.++|||+||.+++. ++.++|+.++++|+..+.
T Consensus 84 ~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred CceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 24999999999999999 778899999999987653
No 236
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.36 E-value=5.2e-10 Score=114.84 Aligned_cols=237 Identities=10% Similarity=0.071 Sum_probs=151.2
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..++|||||++|+-... . ..|.+||+++++.+.... .........|+||++.|+....+.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~-d----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~------------ 77 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLY-S----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF------------ 77 (304)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS------------
T ss_pred ceEEEEECCCCCEEEEEcC-C----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC------------
Confidence 4788999999999986553 2 479999999987543221 222235789999999888766433
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.|.+|++.++. .+..+. .+...+..++|+||+++|+-.. ....|.+||+.++ ........
T Consensus 78 ----~i~vwd~~~~~--~~~~~~--~h~~~v~~~~~~~~~~~l~sgs----~D~~v~lWd~~~~--------~~~~~~~~ 137 (304)
T 2ynn_A 78 ----RIRVFNYNTGE--KVVDFE--AHPDYIRSIAVHPTKPYVLSGS----DDLTVKLWNWENN--------WALEQTFE 137 (304)
T ss_dssp ----EEEEEETTTCC--EEEEEE--CCSSCEEEEEECSSSSEEEEEE----TTSCEEEEEGGGT--------TEEEEEEC
T ss_pred ----EEEEEECCCCc--EEEEEe--CCCCcEEEEEEcCCCCEEEEEC----CCCeEEEEECCCC--------cchhhhhc
Confidence 78999988764 222333 3444677899999999887332 2257999998762 11222222
Q ss_pred c-ccceEEE-EEec-CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe--eCCEEEEEEEeCCce
Q psy4818 302 G-MDHHHEI-IANN-GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV--ANNKLIVHYIQNVRS 376 (734)
Q Consensus 302 ~-~~~~~~~-~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~ 376 (734)
+ ....... |+|+ +..|+. ... +..|..||+.+... ...+.... ...+..+.+. .++.++++...+ .
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~s-gs~---D~~v~iwd~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D--~ 208 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFAS-GCL---DRTVKVWSLGQSTP--NFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDD--L 208 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEE-EET---TSEEEEEETTCSSC--SEEEECCC-TTCEEEEEECCSTTCCEEEEEETT--S
T ss_pred ccCCcEEEEEECCCCCCEEEE-EeC---CCeEEEEECCCCCc--cceeccCC-cCcEEEEEEEEcCCCCEEEEEcCC--C
Confidence 2 2222333 8884 454543 332 34699999876542 23333332 2233333332 235566677666 4
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|.+||+.+++.+..+......+..+.++|++..+ ++.+.. ..+.+||+
T Consensus 209 ~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~D---g~i~iWd~ 257 (304)
T 2ynn_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII-ISGSED---GTLKIWNS 257 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE-EEEETT---SCEEEEET
T ss_pred eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEE-EEEcCC---CeEEEEEC
Confidence 79999998888878887766677788888887644 444443 46889998
No 237
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.36 E-value=2e-10 Score=124.18 Aligned_cols=240 Identities=15% Similarity=0.118 Sum_probs=148.0
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc------cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL------KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~------~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..++||| ++.++++...++ .|++||+.+|+.+.... .......++|+|||+. +++...
T Consensus 126 ~~~~~s~-~~~~~~~~~~~~----~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~---------- 189 (433)
T 3bws_A 126 KSVRFID-NTRLAIPLLEDE----GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNEL-WVSQMQ---------- 189 (433)
T ss_dssp CCCEESS-SSEEEEEBTTSS----SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEE-EEEEGG----------
T ss_pred eEEEEeC-CCeEEEEeCCCC----eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEE-EEEECC----------
Confidence 4689999 555666554333 59999999998653211 1112356899998864 444321
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
...|+++++.++.. +..+. ........++|+|||+++++.... ...|++||+.++. ...
T Consensus 190 -----d~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~d~~~~~---------~~~ 248 (433)
T 3bws_A 190 -----ANAVHVFDLKTLAY--KATVD--LTGKWSKILLYDPIRDLVYCSNWI---SEDISVIDRKTKL---------EIR 248 (433)
T ss_dssp -----GTEEEEEETTTCCE--EEEEE--CSSSSEEEEEEETTTTEEEEEETT---TTEEEEEETTTTE---------EEE
T ss_pred -----CCEEEEEECCCceE--EEEEc--CCCCCeeEEEEcCCCCEEEEEecC---CCcEEEEECCCCc---------EEE
Confidence 23799999876532 22222 222355678999999998776432 2589999998731 111
Q ss_pred eeccccceEE-EEEecCCeEEEEeCCCC----CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEe
Q psy4818 299 VIPGMDHHHE-IIANNGPELIVKTTKNA----PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQ 372 (734)
Q Consensus 299 l~~~~~~~~~-~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~ 372 (734)
.+........ .|+|+|+.+++.+...+ .+..|+.+|+.+++ ....+... . ....+.+. +++.+++....
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTIGPP-G-NKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEEEEE-E-CEEEEEECSSTTEEEEEETT
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeeccCC-C-CcceEEECCCCCEEEEEecC
Confidence 2222122222 38999998887764322 25679999998764 23333222 1 22334444 43467766544
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCC-----------ceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQP-----------GTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P-----------~~~~~~d~ 429 (734)
+ ..+++||+.+++....+... ..+..+.++++++.+++.......+ +.++.+|+
T Consensus 324 ~--~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 324 C--SKIEVYDLKEKKVQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp T--TEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred C--CEEEEEECCCCcEEEEecCC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 4 58999999888876666533 4456788899988787766543322 48999998
No 238
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.36 E-value=1.1e-10 Score=132.62 Aligned_cols=239 Identities=9% Similarity=0.023 Sum_probs=152.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
...++|||||++||+... ..+++||+.+++.+.... ....+..++|||||+.|+-...+.
T Consensus 21 ~~~~~~spdg~~l~~~~~------~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~------------- 81 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCNG------TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG------------- 81 (611)
T ss_dssp CCCCEECTTSSEEEEEET------TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTS-------------
T ss_pred eeEEeeCCCCCEEEeCCC------CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCC-------------
Confidence 346789999999999762 269999998876543222 222346789999999888776533
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
.|.+|++.++... +......+...+..++|||||++|+...........|++||... . ...+..+
T Consensus 82 ---~v~lWd~~~~~~~--~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~-~---------~~~l~gh 146 (611)
T 1nr0_A 82 ---NVRIWDTTQTTHI--LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT-S---------NGNLTGQ 146 (611)
T ss_dssp ---EEEEEESSSTTCC--EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC-B---------CBCCCCC
T ss_pred ---CEEEeECCCCcce--eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC-C---------cceecCC
Confidence 6888998654322 22222223345678999999999986654322225788888543 1 1122222
Q ss_pred ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
....... |+|++...++.+.. +..|..+|..+.. ....+... ...+..+.+..++.++++...+ ..+.+|
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~---D~~v~lwd~~~~~---~~~~l~~H-~~~V~~v~fspdg~~las~s~D--~~i~lw 217 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSD---DNTVAIFEGPPFK---FKSTFGEH-TKFVHSVRYNPDGSLFASTGGD--GTIVLY 217 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEET---TSCEEEEETTTBE---EEEEECCC-SSCEEEEEECTTSSEEEEEETT--SCEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeC---CCeEEEEECCCCe---Eeeeeccc-cCceEEEEECCCCCEEEEEECC--CcEEEE
Confidence 2333333 99998754444333 3458888876543 23333332 3445666666556777777766 479999
Q ss_pred ECCCCceeeeeC-------CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSFP-------LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l~-------~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+|+.+..+. ...+.|.++.++|+++.++ +.+.. ..+.++|+
T Consensus 218 d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D---~~v~lWd~ 268 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASAD---KTIKIWNV 268 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETT---SEEEEEET
T ss_pred ECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCC---CeEEEEeC
Confidence 998888766663 3456788899999987554 43332 47889998
No 239
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.36 E-value=5.1e-10 Score=117.12 Aligned_cols=278 Identities=8% Similarity=0.019 Sum_probs=140.8
Q ss_pred eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---cccccc
Q psy4818 114 HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKF 190 (734)
Q Consensus 114 ~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~ 190 (734)
.-.+|..+..++..+.+...... .....++|||||+ |+++...+ +...|++||+++|+..... ......
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~-----~~p~~~a~spdg~-l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAAT-----QNPTYLALSAKDC-LYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEC-----SCCCCEEECTTCE-EEEEEEET--TEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred CEEEEEEcCCCCeEEEeeeeecc-----CCcceEEEccCCe-EEEEEecC--CCceEEEEEecCCcEEEeeeeecCCCCC
Confidence 34466666555554433221111 1235689999999 55544322 2368999999887632211 122234
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-CCeeEEecCC-------CCeeEEEEEEecCCc
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPN-------GRSLGLHSEVTDCGR 262 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~~v~~~~~-------~~~~~~~~~~SpDG~ 262 (734)
..++|||||+.|++.... ...|.++++..... ..+..+.... .......++|||||+
T Consensus 89 ~~~a~spdg~~l~~~~~~---------------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYH---------------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp SEEEEETTTTEEEEEETT---------------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEeCC---------------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 678999999988877632 12566777643211 1111111110 011345689999999
Q ss_pred EEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee--ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecC--CC
Q psy4818 263 YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI--PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN--NP 338 (734)
Q Consensus 263 ~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~--~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~ 338 (734)
+++.. . ....|++|++.. ...+. ....+. .+.......|+|||+.+|+..... ..+.+++++ ++
T Consensus 154 -l~v~~-~--~~~~v~~~~~~~--~g~~~---~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---~~v~v~~~~~~~g 221 (347)
T 3hfq_A 154 -LAVID-L--GSDKVYVYNVSD--AGQLS---EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS---SQIASLKYDTQTG 221 (347)
T ss_dssp -EEEEE-T--TTTEEEEEEECT--TSCEE---EEEEEECCTTCCEEEEEECTTSSEEEEEETTT---TEEEEEEEETTTT
T ss_pred -EEEEe-C--CCCEEEEEEECC--CCcEE---EeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---CEEEEEEecCCCC
Confidence 55433 2 225799999873 11111 001111 111111224999999888765542 345555554 33
Q ss_pred CCCCceEeecCCCC----ceeEEEEEeeCC-EEEEEEEeCCceeEEEEECC-CCc--eeeeeCCCCceEEeeccCcccce
Q psy4818 339 CEKNWKTLIPEDEN----RTLDVVAAVANN-KLIVHYIQNVRSVMDLHDLN-TGK--RLHSFPLDLGQITHISGRRKYNE 410 (734)
Q Consensus 339 ~~~~~~~l~~~~~~----~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl~-~g~--~~~~l~~~~g~v~~~~~~~d~~~ 410 (734)
.......+...... .....+.+..++ .+|+....+ ..|.+|++. +|+ .+..+......+..+.++||++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY--NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF 299 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT--TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC--CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE
Confidence 31011111111111 223445454434 566655433 568888874 333 22333332223456778899987
Q ss_pred EEEEEecCCCCceEEEEeC
Q psy4818 411 VFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 411 l~~~~ss~~~P~~~~~~d~ 429 (734)
+++..... .--.+|.+|.
T Consensus 300 l~v~~~~~-~~v~v~~~d~ 317 (347)
T 3hfq_A 300 VVVVNQNT-DNATLYARDL 317 (347)
T ss_dssp EEEEETTT-TEEEEEEECT
T ss_pred EEEEEcCC-CcEEEEEEeC
Confidence 77654432 2223444466
No 240
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.35 E-value=5.1e-13 Score=146.90 Aligned_cols=223 Identities=14% Similarity=0.066 Sum_probs=135.4
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCc-CCccccHHHHHHHHhcCeEEEEEecccCC-CCCchhhhccccccCCCch
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQNCF 549 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~~~~~~~~~~~~~ 549 (734)
+.+.++.|++...+++.|+||++|||.... ....+.........+.|++|+.+|||.+. ||+..-.... .......+
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~~~n~gl 164 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-NGDLNAGL 164 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-SSCTTHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccc-cCCCChhH
Confidence 567888897654456789999999985433 22334433222222459999999999532 3432211110 01123458
Q ss_pred hHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC----CCceeEEEEcCCcchhcccccccc--Ccccccc
Q psy4818 550 DDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR----PELYGAALILVGALDMLRFNKFTI--AYYSESE 620 (734)
Q Consensus 550 ~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~~~~~~~~--~~~~~~~ 620 (734)
.|+.++++|+.++- -.||+||.|+|+|+||++++.++... +.+|+++|+.+|............ .......
T Consensus 165 ~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~ 244 (522)
T 1ukc_A 165 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVND 244 (522)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHHHHHHHHHHH
Confidence 89999999998762 26999999999999999988877653 569999999999754321111000 0001112
Q ss_pred cCCCCCHHHHHHHHhCCccC------CCCCCCCCccCCc--EEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEE
Q psy4818 621 FGSPNNKTHFHNLLSYSPLH------NIKVPPNNTQYPA--TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 692 (734)
Q Consensus 621 ~g~~~~~~~~~~~~~~sp~~------~~~~p~~~~~~P~--~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~ 692 (734)
.|.....+..+-|++.++.. .+..+ ....++ ++..++..|..+.+.++.++.++.+.. ++|+.
T Consensus 245 ~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~--~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~-------~vp~l 315 (522)
T 1ukc_A 245 TGCSSARDSLECLREQDIATIQKGNTGSPFP--GGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFI-------KVPVL 315 (522)
T ss_dssp TTCTTCSSHHHHHHHSCHHHHHHHSSCCCCT--TCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSC-------CCCEE
T ss_pred cCCCCHHHHHHHHHcCCHHHHHHHHHhcccc--ccccCcccccccccccCCcccCCCHHHHHhcCCCC-------CCCEE
Confidence 24332222333344333211 00000 001111 455677788888888888777665444 78999
Q ss_pred EEEeCCCCCCCC
Q psy4818 693 LRVEQDAGHGQG 704 (734)
Q Consensus 693 ~~~~~~~gH~~~ 704 (734)
+-...++||.+.
T Consensus 316 ~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 316 VGDDTDEGSNFA 327 (522)
T ss_dssp EEEETBGGGGTS
T ss_pred EEeecchhHHhh
Confidence 999999999886
No 241
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.35 E-value=1.2e-09 Score=112.30 Aligned_cols=227 Identities=14% Similarity=0.092 Sum_probs=144.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|||||++|+..... ..|.+||+.+++.+.... .......+.|+||++.|+....+.
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----------- 129 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE----------- 129 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------
T ss_pred CceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-----------
Confidence 457889999999999876532 479999999988543222 222235789999999887766432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|++|++.++. .+.....+...+..+.|+|||++|+.... ...|.+||+.++. ....+.
T Consensus 130 -----~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~--------~~~~~~ 188 (312)
T 4ery_A 130 -----SVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSY----DGLCRIWDTASGQ--------CLKTLI 188 (312)
T ss_dssp -----CEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC--------EEEEEC
T ss_pred -----cEEEEECCCCE----EEEEecCCCCcEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCc--------eeeEEe
Confidence 68889987653 22222223335678899999998875432 2579999998731 122222
Q ss_pred ccccceE-E-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCC-ceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 301 PGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 301 ~~~~~~~-~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
....... . .|+|+|+.|+..+. +..|..+|+.++.. ...+..+... ..+.......++.++++...+ ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--g~ 260 (312)
T 4ery_A 189 DDDNPPVSFVKFSPNGKYILAATL----DNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSED--NL 260 (312)
T ss_dssp CSSCCCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEE--EEEECSSCCSSSCCCEEEECSSSCEEEECCTT--SC
T ss_pred ccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCCcE--EEEEEecCCceEEEEEEEEeCCCcEEEEECCC--CE
Confidence 2222222 2 38999988776554 34699999977541 2222222211 112222223335666665555 47
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEE
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFY 413 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~ 413 (734)
|++||+.+++.++.+......+..+.++|++..++.
T Consensus 261 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 261 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 999999888887888766666778888888876553
No 242
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.35 E-value=4.9e-10 Score=115.36 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=147.3
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|||||++||.... . ..|.+|++.+++...... ....+..++|+|||+.|+....+.
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----------- 87 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA-D----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK----------- 87 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----------
T ss_pred CcEEEEEECCCCCEEEEeeC-C----CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCC-----------
Confidence 45788999999999987653 2 359999999887543222 222346899999999888776432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|.+|++.++.. +..+. .+...+..+.|+|+|++|+.... ...|.+||+.++. ....+.
T Consensus 88 -----~i~vwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~--------~~~~~~ 146 (312)
T 4ery_A 88 -----TLKIWDVSSGKC--LKTLK--GHSNYVFCCNFNPQSNLIVSGSF----DESVRIWDVKTGK--------CLKTLP 146 (312)
T ss_dssp -----EEEEEETTTCCE--EEEEE--CCSSCEEEEEECSSSSEEEEEET----TSCEEEEETTTCC--------EEEEEC
T ss_pred -----EEEEEECCCCcE--EEEEc--CCCCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCE--------EEEEec
Confidence 688899876532 22232 23345678899999999875432 2579999998731 122222
Q ss_pred ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
......... |+++|+.|+..+.. ..|..+|+.++.. ...+.... ...+..+.+..++..++....+ ..|.
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d--~~i~ 217 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQC--LKTLIDDD-NPPVSFVKFSPNGKYILAATLD--NTLK 217 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCE--EEEECCSS-CCCEEEEEECTTSSEEEEEETT--TEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCce--eeEEeccC-CCceEEEEECCCCCEEEEEcCC--CeEE
Confidence 222223333 88998877655442 4589999976541 22333332 3445555555545666666555 4799
Q ss_pred EEECCCCceeeeeCCCCceE--EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTGKRLHSFPLDLGQI--THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v--~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||+.+++.++.+....... .....++.+..++++.+. -..++.+|+
T Consensus 218 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---dg~i~vwd~ 266 (312)
T 4ery_A 218 LWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE---DNLVYIWNL 266 (312)
T ss_dssp EEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT---TSCEEEEET
T ss_pred EEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC---CCEEEEEEC
Confidence 99998888777665442111 111222233445444433 346899998
No 243
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.03 E-value=8.9e-14 Score=142.45 Aligned_cols=109 Identities=12% Similarity=0.084 Sum_probs=73.7
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|+||++||..+.... |.. +...|+ +||.|+++|+||.|... ............++++.+.+..+++. .+
T Consensus 24 ~~p~vv~lHG~~~~~~~--~~~-~~~~l~-~g~~v~~~D~~G~G~s~---~~~~~~~~~~~~~~~~~~~l~~~l~~--l~ 94 (304)
T 3b12_A 24 SGPALLLLHGFPQNLHM--WAR-VAPLLA-NEYTVVCADLRGYGGSS---KPVGAPDHANYSFRAMASDQRELMRT--LG 94 (304)
Confidence 45789999998665443 333 345566 59999999999955432 11100001223444554444444433 24
Q ss_pred CCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcch
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 604 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 604 (734)
.+++.++|||+||.+++.++.++|++++++|+.+|...
T Consensus 95 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 95 FERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 45899999999999999999999999999999887654
No 244
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.34 E-value=5.2e-13 Score=135.58 Aligned_cols=218 Identities=12% Similarity=0.030 Sum_probs=109.8
Q ss_pred eEEEEEEEcCCCcE-EeEEEEEecccc------CCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCC
Q psy4818 458 QTKQVYFRSKDGTR-VPMYIIHRVGAL------RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG 530 (734)
Q Consensus 458 ~~~~~~~~s~dg~~-i~~~~~~p~~~~------~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~ 530 (734)
..|.+.|++.++.. ...++..+.... ..+..|.||++||..+.... |.. +...|.+ ||.|+++|+||.|
T Consensus 14 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~~~--~~~-l~~~L~~-~~~v~~~D~~G~G 89 (280)
T 3qmv_A 14 GTENLYFQSNALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSA--FRG-WQERLGD-EVAVVPVQLPGRG 89 (280)
T ss_dssp --------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCGGG--GTT-HHHHHCT-TEEEEECCCTTSG
T ss_pred CcceeeeecchhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCChHH--HHH-HHHhcCC-CceEEEEeCCCCC
Confidence 46667787766632 222333221100 01123889999997665443 443 4566775 9999999999944
Q ss_pred CCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCcee----EEEEcCCcc-hh
Q psy4818 531 ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYG----AALILVGAL-DM 605 (734)
Q Consensus 531 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~----a~v~~~~~~-d~ 605 (734)
... . ......++++.+.+..+++.- ...+++.|+|+|+||.+++.++.++|+... .+++..... ..
T Consensus 90 ~S~---~-----~~~~~~~~~~a~~~~~~l~~~-~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~ 160 (280)
T 3qmv_A 90 LRL---R-----ERPYDTMEPLAEAVADALEEH-RLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHL 160 (280)
T ss_dssp GGT---T-----SCCCCSHHHHHHHHHHHHHHT-TCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGG
T ss_pred CCC---C-----CCCCCCHHHHHHHHHHHHHHh-CCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCC
Confidence 321 1 122345666665554444432 134689999999999999999998887655 444433221 11
Q ss_pred cccccc-ccCc-c---ccccc-CCCCC---------------HHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCC
Q psy4818 606 LRFNKF-TIAY-Y---SESEF-GSPNN---------------KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDR 664 (734)
Q Consensus 606 ~~~~~~-~~~~-~---~~~~~-g~~~~---------------~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~ 664 (734)
...... .... . +...+ +.+.. ...+..+..+.+. .... +++| +|+++|++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----i~~P-~l~i~G~~D~~ 234 (280)
T 3qmv_A 161 YGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWH-PRPP----LDCP-TTAFSAAADPI 234 (280)
T ss_dssp CSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCCC-CCCC----BCSC-EEEEEEEECSS
T ss_pred cCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhcccc-CCCc----eecC-eEEEEecCCCC
Confidence 110000 0000 0 00011 11100 0111222333221 1222 6777 99999999999
Q ss_pred CCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC
Q psy4818 665 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT 705 (734)
Q Consensus 665 v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 705 (734)
+++..+..+.+.+ ...+.++++++ ||....
T Consensus 235 ~~~~~~~~~~~~~----------~~~~~~~~~~g-gH~~~~ 264 (280)
T 3qmv_A 235 ATPEMVEAWRPYT----------TGSFLRRHLPG-NHFFLN 264 (280)
T ss_dssp SCHHHHHTTGGGB----------SSCEEEEEEEE-ETTGGG
T ss_pred cChHHHHHHHHhc----------CCceEEEEecC-CCeEEc
Confidence 9987765554432 33466777774 998754
No 245
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.33 E-value=1.1e-09 Score=114.30 Aligned_cols=240 Identities=10% Similarity=0.086 Sum_probs=151.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..+.|||||++|+-... + ..|++||+.+++.+... ........++|+|||+.|+....+.
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~-D----g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~----------- 119 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQ-D----GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN----------- 119 (340)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTC-----------
T ss_pred CceEEEEECCCCCEEEEEeC-C----CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCC-----------
Confidence 44788999999999885543 2 37999999988754322 2222236789999999888766432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.+.++++.+.............+...+..+.|+++++ |+ +.. ....|.+||+.++. ....+.
T Consensus 120 -----~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~-s~s---~d~~i~~wd~~~~~--------~~~~~~ 181 (340)
T 1got_B 120 -----ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IV-TSS---GDTTCALWDIETGQ--------QTTTFT 181 (340)
T ss_dssp -----EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EE-EEE---TTSCEEEEETTTTE--------EEEEEC
T ss_pred -----eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EE-EEE---CCCcEEEEECCCCc--------EEEEEc
Confidence 6888888765432223322223444667789999987 33 222 22579999998731 122222
Q ss_pred ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
......... |+|+++.++..+. +..|..||+.++. ....+... ...+..+.+..++.++++...+ ..|.
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~----d~~v~~wd~~~~~---~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d--~~v~ 251 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGAC----DASAKLWDVREGM---CRQTFTGH-ESDINAICFFPNGNAFATGSDD--ATCR 251 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCS---EEEEECCC-SSCEEEEEECTTSSEEEEEETT--SCEE
T ss_pred CCCCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCe---eEEEEcCC-cCCEEEEEEcCCCCEEEEEcCC--CcEE
Confidence 222233333 8899886664443 3458899997764 23333332 3345556565556667776666 4789
Q ss_pred EEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||+.+++.+..+..+ ...+..+.+++++..++....+ ..+.+||+
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----~~i~vwd~ 299 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD----FNCNVWDA 299 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT----SEEEEEET
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC----CeEEEEEc
Confidence 9999878766555433 3457788899998766554332 46899998
No 246
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.32 E-value=1.2e-09 Score=113.31 Aligned_cols=234 Identities=11% Similarity=0.036 Sum_probs=148.8
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc--cc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY--PE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~--~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..+..++|||||++|+..... ..|++||+.+++.. .. .........+.|+||++.|+....+.
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------- 163 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------- 163 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS---------
T ss_pred CcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC---------
Confidence 457899999999999876532 37999999988731 11 11222236789999999888766432
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|+++++.+.. .+..+. .+......+.|+|||++|+.... ...|++||+.++. ...
T Consensus 164 -------~v~~~d~~~~~--~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~---------~~~ 219 (337)
T 1gxr_A 164 -------NIAVWDLHNQT--LVRQFQ--GHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGR---------QLQ 219 (337)
T ss_dssp -------CEEEEETTTTE--EEEEEC--CCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE---------EEE
T ss_pred -------cEEEEeCCCCc--eeeeee--cccCceEEEEECCCCCEEEEEec----CCcEEEEECCCCc---------eEe
Confidence 58888887653 122222 23345678999999999886432 2689999998721 111
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
........... |+|+|+.+++.+.. ..|..+++.++. ...+..+ ...+..+.+..++.++++...+ ..
T Consensus 220 ~~~~~~~v~~~~~s~~~~~l~~~~~~----~~i~~~~~~~~~---~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d--g~ 288 (337)
T 1gxr_A 220 QHDFTSQIFSLGYCPTGEWLAVGMES----SNVEVLHVNKPD---KYQLHLH--ESCVLSLKFAYCGKWFVSTGKD--NL 288 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETT----SCEEEEETTSSC---EEEECCC--SSCEEEEEECTTSSEEEEEETT--SE
T ss_pred eecCCCceEEEEECCCCCEEEEEcCC----CcEEEEECCCCC---eEEEcCC--ccceeEEEECCCCCEEEEecCC--Cc
Confidence 22222222333 89999988876543 359999998765 2333322 3445556665545666666655 47
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|++|++.+++.+..+. ....+..+.++++++.++....+ ..+..||+
T Consensus 289 i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~ 335 (337)
T 1gxr_A 289 LNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGD----KKATVYEV 335 (337)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETT----SCEEEEEE
T ss_pred EEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecCC----CeEEEEEE
Confidence 9999998887654443 24557788888888766544332 35777765
No 247
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.32 E-value=3.6e-10 Score=128.31 Aligned_cols=240 Identities=11% Similarity=0.069 Sum_probs=141.1
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
.|+|+++++-. + +. +++.+..++.....+. ++...+..++|||||++||-... ...|++||+.
T Consensus 27 spdg~~l~~~~--~--~~--v~l~~~~~~~~~~~~~------~h~~~v~~~~~spdg~~lasg~~-----d~~v~lWd~~ 89 (611)
T 1nr0_A 27 TPAGDKIQYCN--G--TS--VYTVPVGSLTDTEIYT------EHSHQTTVAKTSPSGYYCASGDV-----HGNVRIWDTT 89 (611)
T ss_dssp CTTSSEEEEEE--T--TE--EEEEETTCSSCCEEEC------CCSSCEEEEEECTTSSEEEEEET-----TSEEEEEESS
T ss_pred CCCCCEEEeCC--C--CE--EEEecCCCcccCeEec------CCCCceEEEEECCCCcEEEEEeC-----CCCEEEeECC
Confidence 47888888754 1 22 3333333333333332 23345889999999999996543 2479999998
Q ss_pred CCCccc-cc--ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEE
Q psy4818 177 TGKDYP-EV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGL 253 (734)
Q Consensus 177 ~g~~~~-~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~ 253 (734)
+++... .+ .....+..++|||||+.|+....+. .....|++++.+... . .+ ..+...+.
T Consensus 90 ~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~------------~~~~~v~~wd~~~~~--~--~l--~gh~~~v~ 151 (611)
T 1nr0_A 90 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR------------ERFGHVFLFDTGTSN--G--NL--TGQARAMN 151 (611)
T ss_dssp STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS------------SCSEEEEETTTCCBC--B--CC--CCCSSCEE
T ss_pred CCcceeeEeecccCCceEEEEECCCCCEEEEEECCC------------CceeEEEEeeCCCCc--c--ee--cCCCCCce
Confidence 665321 11 1122346899999999998776432 122367777654321 1 11 22344677
Q ss_pred EEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEE
Q psy4818 254 HSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVT 332 (734)
Q Consensus 254 ~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~ 332 (734)
.+.|+||+++++++.+. ...|.+||..++ .....+..+....... |+|||+.|+-.+. +..|.+
T Consensus 152 ~v~f~p~~~~~l~s~s~---D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspdg~~las~s~----D~~i~l 216 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGSD---DNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPDGSLFASTGG----DGTIVL 216 (611)
T ss_dssp EEEECSSSSCEEEEEET---TSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEE
T ss_pred EEEECCCCCeEEEEEeC---CCeEEEEECCCC--------eEeeeeccccCceEEEEECCCCCEEEEEEC----CCcEEE
Confidence 89999999865555433 257889997662 1112222223333343 9999987765443 345889
Q ss_pred EecCCCCCCCceEeecC------CCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeee
Q psy4818 333 INLNNPCEKNWKTLIPE------DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 391 (734)
Q Consensus 333 ~d~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~ 391 (734)
||+.++. ....+.. .....+..+.+..++..+++...+ ..+.+||+.+++.+..
T Consensus 217 wd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D--~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 217 YNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD--KTIKIWNVATLKVEKT 276 (611)
T ss_dssp EETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT--SEEEEEETTTTEEEEE
T ss_pred EECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC--CeEEEEeCCCCceeee
Confidence 9987654 2222211 123345566665556667776666 4788899877765443
No 248
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.32 E-value=5.5e-09 Score=116.14 Aligned_cols=287 Identities=10% Similarity=0.080 Sum_probs=167.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC--CCCCcccccccccccCeeEEEc----CCcEEEEEEEecCCCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV--DTGKDYPEVLKNVKFPSISWTH----DHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl--~~g~~~~~~~~~~~~~~~~wSp----Dg~~l~y~~~~~~~~~~~~~ 217 (734)
+..+++||||++|+.+.. . ..|.+||+ ++++.+.....+....+++||| ||++||.....+
T Consensus 181 ~~~v~~spdg~~l~v~~~-d----~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~-------- 247 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGR-D----ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP-------- 247 (543)
T ss_dssp EEEEEECTTSCEEEEEET-T----SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES--------
T ss_pred cceEEECCCCCEEEEECC-C----CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccC--------
Confidence 567899999998876553 2 46999999 7877544322233346889999 999887765422
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCC--------C-CeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCC
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPN--------G-RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 288 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~--------~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~ 288 (734)
..|.+++..+.... ..+.... + ......+.+|||++.+++... ....|+++|..++..
T Consensus 248 -------~~v~v~D~~t~~~~--~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~---~~g~i~vvd~~~~~~- 314 (543)
T 1nir_A 248 -------PQFAIMDGETLEPK--QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK---ETGKVLLVNYKDIDN- 314 (543)
T ss_dssp -------SEEEEEETTTCCEE--EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET---TTTEEEEEECTTSSS-
T ss_pred -------CeEEEEeccccccc--eeecccCcccCccccccCCceEEEEECCCCCEEEEEEC---CCCeEEEEEecCCCc-
Confidence 26778887765321 1221100 0 114567899999998876543 236899999987321
Q ss_pred cccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC----CCceeEEEEEeeCC
Q psy4818 289 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED----ENRTLDVVAAVANN 364 (734)
Q Consensus 289 ~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~ 364 (734)
+ ....+-.+.....-.|+|||+++|...+. ...|.++|+++++ +...++.. ...... +..++++
T Consensus 315 -l----~~~~i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~---l~~~i~~g~~ph~g~g~~-~~~p~~g 382 (543)
T 1nir_A 315 -L----TVTSIGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRR---LSALVDVGKTPHPGRGAN-FVHPKYG 382 (543)
T ss_dssp -C----EEEEEECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTE---EEEEEECSSSBCCTTCEE-EEETTTE
T ss_pred -c----eeEEeccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCCe---EEEeeccCCCCCCCCCcc-cCCCCCc
Confidence 1 01111111111112499999988766543 2468889998765 33333321 111122 2223334
Q ss_pred EEEEEEEeCCceeEEEEECCC-------CceeeeeCCCCceEEeeccCcccceEEEEEecCCCC-----ceEEEEeCCCC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNT-------GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQP-----GTIYHCNIPEN 432 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~-------g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P-----~~~~~~d~~~~ 432 (734)
.++++ ...+...|.+||+.+ ++.++.|..+.+....+.++|+++.+++.. ...| ..+.++|+
T Consensus 383 ~~~~s-~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~--~~~~~~~~~~~v~v~d~--- 456 (543)
T 1nir_A 383 PVWST-SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT--TFNPDARISQSVAVFDL--- 456 (543)
T ss_dssp EEEEE-EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC--TTCSSHHHHTCEEEEET---
T ss_pred cEEEe-ccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec--CCCCCcccCceEEEEEC---
Confidence 55544 333346799999977 677788876533333677889998887643 2223 37999999
Q ss_pred cCCCCCCceeEEeeccCCCCCCCCceEEEEEEEcCCCcEEeEEEE
Q psy4818 433 ITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYII 477 (734)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~i~~~~~ 477 (734)
++++...+.+.-.+..++....-.+.++.| +.||.++...+.
T Consensus 457 --~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~g~~~~~s~~ 498 (543)
T 1nir_A 457 --KNLDAKYQVLPIAEWADLGEGAKRVVQPEY-NKRGDEVWFSVW 498 (543)
T ss_dssp --TCTTSCCEEECHHHHHCCCSSCCEEEEEEE-CSSSSEEEEEEE
T ss_pred --CCCCCCeEEeechhhcccCCCCCceEeccC-CCCCCEEEEEee
Confidence 555322132211111122223335666777 578887765443
No 249
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.31 E-value=3.5e-10 Score=117.43 Aligned_cols=240 Identities=11% Similarity=0.064 Sum_probs=138.5
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
..|+++++++..+.... ..|+++|+++|+.+.... +.... .++|+|||+.|+++... ..
T Consensus 3 ~~~~~~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---------------~~ 62 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHL----RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---------------CQ 62 (331)
T ss_dssp ----CCCCEEEEEEGGG----TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---------------TC
T ss_pred eeEcCCCCEEEEEecCC----CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---------------CC
Confidence 45778888766555433 379999999998644322 22233 88999999988776642 22
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEE-EEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLH-SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 304 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~-~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~ 304 (734)
.|+++++.++... .........+ .. +.|||||++|+ ..........|++||+.++. ....+..+..
T Consensus 63 ~i~~~d~~~~~~~-~~~~~~~~~~---~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~--------~~~~~~~~~~ 129 (331)
T 3u4y_A 63 TLVQIETQLEPPK-VVAIQEGQSS---MADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNK--------FISTIPIPYD 129 (331)
T ss_dssp EEEEEECSSSSCE-EEEEEECSSC---CCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTE--------EEEEEECCTT
T ss_pred eEEEEECCCCcee-EEecccCCCC---ccceEECCCCCEEE-EecCCCCcccEEEEECCCCC--------eEEEEECCCC
Confidence 7999998876431 2222222222 24 79999999998 33222122389999998731 1111212222
Q ss_pred ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC-CCc-eEeecCCCCceeEEEEEeeCC-EEEEEEEeCCceeEEEE
Q psy4818 305 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE-KNW-KTLIPEDENRTLDVVAAVANN-KLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 305 ~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~-~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~ 381 (734)
.....|+|||+++|+...... . .|.+++++.... ... ..+++.. .....+.+..++ .+++.... ...|++|
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~-~-~i~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~--~~~v~v~ 203 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSA-N-TVRRFKIDADGVLFDTGQEFISGG--TRPFNITFTPDGNFAFVANLI--GNSIGIL 203 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTT-T-EEEEEEECTTCCEEEEEEEEECSS--SSEEEEEECTTSSEEEEEETT--TTEEEEE
T ss_pred ccceEECCCCCEEEEEecCCC-c-eEEEEEECCCCcEeecCCccccCC--CCccceEECCCCCEEEEEeCC--CCeEEEE
Confidence 222249999998887654322 2 256566543220 000 1222222 223444454434 46655433 3579999
Q ss_pred ECCCCce---eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKR---LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~---~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+++. +..+... ..+..+.++|+++.+++.... ...++.+|+
T Consensus 204 d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~---~~~i~~~d~ 250 (331)
T 3u4y_A 204 ETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTES---TVDVFNFNQ 250 (331)
T ss_dssp ECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSS---EEEEEEEET
T ss_pred ECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcC---CCEEEEEEC
Confidence 9988887 5666543 334567788999877765432 346899999
No 250
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=7.1e-10 Score=120.76 Aligned_cols=240 Identities=8% Similarity=0.066 Sum_probs=149.2
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC--CCCccccc---ccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~--~g~~~~~~---~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
.+..++|||||++|+++.... ..|.+||+. +++.+... ........++|+|||+.|+....+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--------- 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF--------- 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---------
T ss_pred ceEEEEEcCCCCEEEEEECCC----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---------
Confidence 478999999999986666544 369999998 77754432 112234689999999988877532
Q ss_pred cccccCCcEEEEEECCCCCCCC--eeEEecCCCCeeEEEEEEecC---CcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKD--IPVVEFPNGRSLGLHSEVTDC---GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~--~~v~~~~~~~~~~~~~~~SpD---G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
..|+.+++.+..... ...+.. +...+..+.|+|| |++|+.... ...|++||+.++.
T Consensus 171 -------g~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~----d~~i~vwd~~~~~------ 231 (450)
T 2vdu_B 171 -------GDVYSIDINSIPEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDR----DEHIKISHYPQCF------ 231 (450)
T ss_dssp -------SEEEEEETTSCCCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEET----TSCEEEEEESCTT------
T ss_pred -------CcEEEEecCCcccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcC----CCcEEEEECCCCc------
Confidence 268889887654322 001111 2235678999999 888875432 2579999998731
Q ss_pred CCCceeee-ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC---------------------
Q psy4818 293 KFPLKTVI-PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE--------------------- 349 (734)
Q Consensus 293 ~~~~~~l~-~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~--------------------- 349 (734)
....+. ......... |+ ||+.|+..+. +..|.+||+.++. ....+..
T Consensus 232 --~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~----d~~v~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 232 --IVDKWLFGHKHFVSSICCG-KDYLLLSAGG----DDKIFAWDWKTGK---NLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp --CEEEECCCCSSCEEEEEEC-STTEEEEEES----SSEEEEEETTTCC---EEEEEECHHHHGGGCCTTSBC-------
T ss_pred --eeeeeecCCCCceEEEEEC-CCCEEEEEeC----CCeEEEEECCCCc---Eeeeecchhhhhhhhhhccccccccccc
Confidence 122222 222223333 88 8887776553 3579999998765 2222221
Q ss_pred ---CCCceeEEEEEeeCCEEEEEEE-eCCceeEEEEEC--CCC---ceeeeeCCCCceEEeeccCcccceEEEEEecCCC
Q psy4818 350 ---DENRTLDVVAAVANNKLIVHYI-QNVRSVMDLHDL--NTG---KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQ 420 (734)
Q Consensus 350 ---~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~dl--~~g---~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~ 420 (734)
.....+..+.+..++.+++... .+ ..|++|++ .++ +.+..+..+ +.+..+.++++ .++++.++...
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d--~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~--~~~v~~~~~~~ 376 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEAT--KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND--EFQVTLDNKES 376 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTC--SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT--EEEEEECCTTC
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCC--CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC--cEEEEEecccC
Confidence 1122344455544444444444 33 57888988 555 444555554 56778888873 57778888777
Q ss_pred Cc------eEEEEeC
Q psy4818 421 PG------TIYHCNI 429 (734)
Q Consensus 421 P~------~~~~~d~ 429 (734)
|. .+|.++.
T Consensus 377 ~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSCCCSEEEEEEET
T ss_pred CCCCCcceEEEEEEc
Confidence 75 7888887
No 251
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.30 E-value=1.5e-09 Score=116.66 Aligned_cols=238 Identities=9% Similarity=0.045 Sum_probs=152.4
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..+.|||||++|+-... + ..|++||+.+|+........ ..+..++|+|||+.|+-...+.
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~-D----g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~---------- 172 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASE-D----ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM---------- 172 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEES-S----SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred CCcEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC----------
Confidence 345788999999998886543 2 36999999999865432221 2346789999999777666432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|.+|++.+.. .+.....+...+..+.|+|||++|+... ....|.+||+.++. ....+
T Consensus 173 ------~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~~l~s~s----~D~~i~~wd~~~~~--------~~~~~ 230 (410)
T 1vyh_C 173 ------TIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGDHIVSAS----RDKTIKMWEVQTGY--------CVKTF 230 (410)
T ss_dssp ------CCCEEETTSSC----EEECCCCCSSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTCC--------EEEEE
T ss_pred ------eEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCCEEEEEe----CCCeEEEEECCCCc--------EEEEE
Confidence 57778876543 2333233444677899999999987432 23689999998731 12223
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC---------------
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN--------------- 363 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------------- 363 (734)
.......... ++++|+.|+..+. +..|..||+.++. ....+... ...+..+.+..+
T Consensus 231 ~~h~~~v~~~~~~~~g~~l~s~s~----D~~v~vwd~~~~~---~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 231 TGHREWVRMVRPNQDGTLIASCSN----DQTVRVWVVATKE---CKAELREH-RHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred eCCCccEEEEEECCCCCEEEEEcC----CCeEEEEECCCCc---eeeEecCC-CceEEEEEEcCcccccchhhhcccccc
Confidence 2222222222 7888886665444 2458889987654 23223222 233444444321
Q ss_pred -----CEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 364 -----NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 -----~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++++...+ ..|++||+.+|+.+..+....+.|.++.+++++..++ +.+.. ..+..||+
T Consensus 303 ~~~~~g~~l~sgs~D--~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~D---~~i~vwd~ 367 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRD--KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADD---KTLRVWDY 367 (410)
T ss_dssp -----CCEEEEEETT--SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEETT---TEEEEECC
T ss_pred ccCCCCCEEEEEeCC--CeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEeCC---CeEEEEEC
Confidence 3456666665 4799999988988777776666777888888887655 33332 47999998
No 252
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=6.6e-10 Score=120.98 Aligned_cols=202 Identities=10% Similarity=0.116 Sum_probs=121.2
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC--CCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG--TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 267 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~ 267 (734)
+..++|||||+.|+++...+ ..|.+|++. ++. .+..+...........+.|+|||++|+..
T Consensus 105 v~~~~~s~d~~~l~~~~~~d---------------g~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSD---------------KSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGG---------------TEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCC---------------CeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCCCEEEEE
Confidence 45789999999987766322 267888877 443 22333221223356789999999999865
Q ss_pred EecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEec---CCeEEEEeCCCCCCceEEEEecCCCCCCCc
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNW 343 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 343 (734)
.. ...++++++.++.... .....+.......... |+|+ ++.|+..+. +..|.+||+.++.. .
T Consensus 168 ~~----~g~v~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~----d~~i~vwd~~~~~~--~ 233 (450)
T 2vdu_B 168 DK----FGDVYSIDINSIPEEK----FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR----DEHIKISHYPQCFI--V 233 (450)
T ss_dssp ET----TSEEEEEETTSCCCSS----CCCCCSEECSSCEEEEEEEECTTSCEEEEEEET----TSCEEEEEESCTTC--E
T ss_pred eC----CCcEEEEecCCccccc----ccceeeecccCceEEEEEcCCCCCCcEEEEEcC----CCcEEEEECCCCce--e
Confidence 32 2579999998732210 0111222222333333 9999 665554443 24588899876641 2
Q ss_pred eEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-------------------------Cce
Q psy4818 344 KTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------------------LGQ 398 (734)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-------------------------~g~ 398 (734)
..+.... ...+..+.+. ++.++++...+ ..|.+||+.+|+.+..+... ...
T Consensus 234 ~~~~~~h-~~~v~~~~~s-d~~~l~s~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 234 DKWLFGH-KHFVSSICCG-KDYLLLSAGGD--DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp EEECCCC-SSCEEEEEEC-STTEEEEEESS--SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred eeeecCC-CCceEEEEEC-CCCEEEEEeCC--CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 2323222 3344555555 46666666655 48999999989876666421 234
Q ss_pred EEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 399 ITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 399 v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+.++++++.+++.... -..+++|++
T Consensus 310 v~~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp EEEEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 6677788888766655422 246888887
No 253
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.30 E-value=1.1e-09 Score=113.36 Aligned_cols=235 Identities=9% Similarity=0.031 Sum_probs=149.6
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc------ccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV------LKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~------~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
.+..++|||||++|+... . ..|++||+.+++..... ........+.|+||++.|+....+.
T Consensus 53 ~v~~~~~~~~~~~l~~~~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 119 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG--K----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS------- 119 (337)
T ss_dssp CCCEEEECSSSSEEEEEC--B----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-------
T ss_pred ceEEEEEecCCcEEEEcC--C----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-------
Confidence 467899999999998764 2 46999999887632211 1222346789999999888776432
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.|+++++.++.......+. .+......+.|+|||++|+.... ...|++||+.++. ..
T Consensus 120 ---------~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~~--------~~ 176 (337)
T 1gxr_A 120 ---------TLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQT--------LV 176 (337)
T ss_dssp ---------EEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE--------EE
T ss_pred ---------cEEEEECCCCCcceeeecc--cCCCceEEEEECCCCCEEEEEeC----CCcEEEEeCCCCc--------ee
Confidence 6889998876432222222 22334668899999999886442 2579999998721 11
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
..+.......... |+|+++.|+..+. +..|..+|+.++. ....+... ..+..+.+..++.+++....+
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~---~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~-- 245 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGR---QLQQHDFT--SQIFSLGYCPTGEWLAVGMES-- 245 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE---EEEEEECS--SCEEEEEECTTSSEEEEEETT--
T ss_pred eeeecccCceEEEEECCCCCEEEEEec----CCcEEEEECCCCc---eEeeecCC--CceEEEEECCCCCEEEEEcCC--
Confidence 2222222223333 8999988776554 3469999998764 22223322 334455554445555555544
Q ss_pred eeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+++||+.+++. ..+....+.+..+.++++++.++... . -..+..||+
T Consensus 246 ~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~i~~~~~ 294 (337)
T 1gxr_A 246 SNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTG-K---DNLLNAWRT 294 (337)
T ss_dssp SCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEE-T---TSEEEEEET
T ss_pred CcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEec-C---CCcEEEEEC
Confidence 4699999977665 44554556677888899887655433 2 247999998
No 254
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.30 E-value=6e-13 Score=135.79 Aligned_cols=104 Identities=15% Similarity=-0.002 Sum_probs=74.3
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|+||++||.........|.. +...|+ +||.|+++|+||.|... .......+++++...+..+++.- ..
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~-~~~~L~-~~~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~~~--~~ 109 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFAN-IIDKLP-DSIGILTIDAPNSGYSP-------VSNQANVGLRDWVNAILMIFEHF--KF 109 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHH-HHTTSC-TTSEEEEECCTTSTTSC-------CCCCTTCCHHHHHHHHHHHHHHS--CC
T ss_pred CCEEEEEcCCCCCcHHHHHHH-HHHHHh-hcCeEEEEcCCCCCCCC-------CCCcccccHHHHHHHHHHHHHHh--CC
Confidence 489999997311111123333 335565 59999999999965432 01123456788888777777653 34
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
+++.++|||+||.+++.++.++|++++++|+..|.
T Consensus 110 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 110 QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp SEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CCeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 58999999999999999999999999999998853
No 255
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.29 E-value=6.4e-10 Score=130.72 Aligned_cols=237 Identities=11% Similarity=0.082 Sum_probs=154.3
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..++|||||++||.+.. + ..|.+||+.+|+.+... .....+..++|+|||+.|+....+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~-~----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------------ 77 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY-S----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF------------ 77 (814)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS------------
T ss_pred ceEEEEECCCCCEEEEEeC-C----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC------------
Confidence 4788999999999998763 2 36999999998754322 2223346899999999998876432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI- 300 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~- 300 (734)
.|.+|++.++.. +..+. .+...+..+.|||||++|+.... ...|.+|++.++ .......
T Consensus 78 ----~i~vw~~~~~~~--~~~~~--~~~~~v~~~~~s~~~~~l~~~~~----dg~i~vw~~~~~--------~~~~~~~~ 137 (814)
T 3mkq_A 78 ----RIRVFNYNTGEK--VVDFE--AHPDYIRSIAVHPTKPYVLSGSD----DLTVKLWNWENN--------WALEQTFE 137 (814)
T ss_dssp ----EEEEEETTTCCE--EEEEE--CCSSCEEEEEECSSSSEEEEEET----TSEEEEEEGGGT--------SEEEEEEE
T ss_pred ----eEEEEECCCCcE--EEEEe--cCCCCEEEEEEeCCCCEEEEEcC----CCEEEEEECCCC--------ceEEEEEc
Confidence 789999887642 22232 23446778999999999885432 257999998772 1122222
Q ss_pred ccccceEEE-EEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee--CCEEEEEEEeCCce
Q psy4818 301 PGMDHHHEI-IAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA--NNKLIVHYIQNVRS 376 (734)
Q Consensus 301 ~~~~~~~~~-~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~ 376 (734)
......... |+| +++.|+..+. +..|..+|+.++.. ...+..+. ...+..+.+.. ++.++++...+ .
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d--g 208 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQSTP--NFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDD--L 208 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEET----TSEEEEEETTCSSC--SEEEECCC-TTCCCEEEECCSTTCCEEEEECTT--S
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcc--eeEEecCC-CCCEEEEEEEECCCCCEEEEEeCC--C
Confidence 222223333 899 6666665444 24699999876542 23333322 23334444432 35566666555 4
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|.+||+.+++.+..+....+.+..+.++++++.++... . -..+..||+
T Consensus 209 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~v~vwd~ 257 (814)
T 3mkq_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS-E---DGTLKIWNS 257 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE-T---TSCEEEEET
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-C---CCeEEEEEC
Confidence 799999988887777776666788888999887555433 2 246888998
No 256
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2.8e-09 Score=111.87 Aligned_cols=239 Identities=12% Similarity=0.112 Sum_probs=149.3
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|||||++|+.... + ..|++||+.+++.+.... ....+..++|+||++.|+....+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg----------- 96 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK-D----SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY----------- 96 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES-S----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT-----------
T ss_pred ceEEEEEEcCCCCEEEEEeC-C----CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC-----------
Confidence 44889999999999987653 2 369999999988644322 222346899999999888766432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC-CCCceEEEEeCCCCCCCc-cc--CCCCc
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN-TQGSDLHYFDLHSLPDGK-IS--GKFPL 296 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~-~~~~~i~~~d~~~~~~~~-l~--~~~~~ 296 (734)
.|++|++.++.. +..+. .......+.|+|||++|+...... .....|.+||+.++.... +. .....
T Consensus 97 -----~i~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 97 -----SIKLWDVSNGQC--VATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp -----EEEEEETTTCCE--EEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred -----eEEEEECCCCcE--EEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 789999887642 22333 223467899999999998765431 112678889887632111 00 00111
Q ss_pred eeeecccc--ceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 297 KTVIPGMD--HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 297 ~~l~~~~~--~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
..+..... .... .|+++++.|+..+. +..|..+|+.+.. .....+... ...+..+.+..++.++++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHK----DGKISKYDVSNNY--EYVDSIDLH-EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEET----TSEEEEEETTTTT--EEEEEEECC-SSCEEEEEECTTSSEEEEEETT
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcC----CCEEEEEECCCCc--EeEEEEecC-CCceeEEEECCCCCEEEEecCC
Confidence 12221111 2223 38999998776554 3469999997632 122233322 2345555555445556666555
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEe
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~s 416 (734)
..|++||+.+++.+..+.. ...+..+.+++++..+++...
T Consensus 240 --~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 240 --TNSFLVDVSTLQVLKKYET-DCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp --SEEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEEC
T ss_pred --ceEEEEECCCCceeeeecC-CCCceeEEecCCCceEEEeec
Confidence 4799999988887776663 344667888888877776544
No 257
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.28 E-value=1.5e-10 Score=122.96 Aligned_cols=121 Identities=14% Similarity=0.027 Sum_probs=88.7
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhc---------CeEEEEEecccCCCCCchhh
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF---------NGIYAIPNIRGGGELGEDWH 537 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~rG~~~~g~~~~ 537 (734)
.||..|+...+.+.+ +..|.||++||.+++... |.. +...|.+. ||.|+++|+||.|... .
T Consensus 75 i~g~~i~~~~~~~~~----~~~~plll~HG~~~s~~~--~~~-~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~---~ 144 (388)
T 4i19_A 75 IDGATIHFLHVRSPE----PDATPMVITHGWPGTPVE--FLD-IIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSG---P 144 (388)
T ss_dssp ETTEEEEEEEECCSS----TTCEEEEEECCTTCCGGG--GHH-HHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGC---C
T ss_pred ECCeEEEEEEccCCC----CCCCeEEEECCCCCCHHH--HHH-HHHHHhCcccccCCCCCCeEEEEEcCCCCCCCC---C
Confidence 488888877665543 456789999998876543 333 34566654 9999999999944322 1
Q ss_pred hccccccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
. ......++++...+..|+++ +..++++++|||+||+++..++.++|+.++++|+..|+.
T Consensus 145 ~----~~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 145 L----KSAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp C----SSCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred C----CCCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 1 11134677887777777665 344689999999999999999999999999999988643
No 258
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.28 E-value=1.8e-10 Score=121.35 Aligned_cols=241 Identities=9% Similarity=0.035 Sum_probs=142.2
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---c--cccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---L--KNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
..+..++||||++.|+- . ..| .|++||+.+++.+... . ....+..++|+|||+.|+....+.
T Consensus 95 ~~V~~~~~s~d~~~l~~-s-~dg----~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg------- 161 (357)
T 4g56_B 95 AGVTDVAWVSEKGILVA-S-DSG----AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF------- 161 (357)
T ss_dssp SCEEEEEEETTTEEEEE-E-TTS----CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-------
T ss_pred CCEEEEEEcCCCCEEEE-E-CCC----EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-------
Confidence 34788999999987652 2 223 5999999988743211 1 112246789999999888766432
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.|.+|++.++. .+..+. .+...+..++|+|+++.++++... ...|.+||+.++.... .
T Consensus 162 ---------~v~iwd~~~~~--~~~~~~--~h~~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~~------~ 219 (357)
T 4g56_B 162 ---------SVKVWDLSQKA--VLKSYN--AHSSEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPAT------R 219 (357)
T ss_dssp ---------CEEEEETTTTE--EEEEEC--CCSSCEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCBC------B
T ss_pred ---------eEEEEECCCCc--EEEEEc--CCCCCEEEEEEccCCCceeeeecc---CCceEEEECCCCceee------e
Confidence 58888887653 122222 233456789999999866555443 2579999998732110 0
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCC
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNV 374 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 374 (734)
............. |+|++..++..... +..|..+|+.++.. ...+ ... ...+..+.+. +++.++++...+
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~~~--~~~~-~~~-~~~v~~l~~sp~~~~~lasgs~D- 291 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNPDS--AQTS-AVH-SQNITGLAYSYHSSPFLASISED- 291 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCGGG--CEEE-CCC-SSCEEEEEECSSSSCCEEEEETT-
T ss_pred eeeccccccccchhhhhcccceEEEeec---ccceeEEECCCCcE--eEEE-ecc-ceeEEEEEEcCCCCCEEEEEeCC-
Confidence 0011111122233 88987766655443 34588999987652 2333 322 2344555554 445677777666
Q ss_pred ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 430 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~ 430 (734)
..|++||+.+++.++.+ ...+.|.++.++|.+..++++.+.. ..+.++|+.
T Consensus 292 -~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~D---g~v~iW~~~ 342 (357)
T 4g56_B 292 -CTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWD---HKVLHHHLP 342 (357)
T ss_dssp -SCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETT---SCEEEEECC
T ss_pred -CEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCC---CeEEEEECC
Confidence 46999999888876555 3456788899998444455555543 368889983
No 259
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.27 E-value=4e-09 Score=112.49 Aligned_cols=238 Identities=14% Similarity=0.111 Sum_probs=143.2
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..++|||||++||.... . ..|++||+++++.+.... ....+..++|+|||+.|+....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~-d----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~------------ 187 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAE-D----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR------------ 187 (393)
T ss_dssp BEEEEEECTTSSEEEEEET-T----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------------
T ss_pred eEEEEEECCCCCEEEEEcC-C----CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCC------------
Confidence 3778999999999986653 2 369999999987543222 222346899999999887665432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee-
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV- 299 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l- 299 (734)
.|.+|++.++.. ...+... .....+.|+| ||++|+.... ...|.+||+.++. ....+
T Consensus 188 ----~v~iwd~~~~~~--~~~~~~~---~~v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~--------~~~~~~ 246 (393)
T 1erj_A 188 ----TVRIWDLRTGQC--SLTLSIE---DGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGF--------LVERLD 246 (393)
T ss_dssp ----EEEEEETTTTEE--EEEEECS---SCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCC--------EEEEEC
T ss_pred ----cEEEEECCCCee--EEEEEcC---CCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCCc--------EEEeec
Confidence 788999877542 2222221 2356789999 8998875432 2578999998732 11111
Q ss_pred ------eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC---------CceEeecCCCCceeEEEEEeeC
Q psy4818 300 ------IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK---------NWKTLIPEDENRTLDVVAAVAN 363 (734)
Q Consensus 300 ------~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~ 363 (734)
.......... |+|+|+.|+..+. +..|..||+.+.... .....+... ...+..+.+..+
T Consensus 247 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~----d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~ 321 (393)
T 1erj_A 247 SENESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH-KDFVLSVATTQN 321 (393)
T ss_dssp ------CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC---------------CEEEEEECC-SSCEEEEEECGG
T ss_pred ccccCCCCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEECCCCCCcccccCCCCCcceEEEecc-cCcEEEEEECCC
Confidence 1112223333 8999987765443 346888888653210 011111121 223344445444
Q ss_pred CEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCc------ccceEEEEEecCCCCceEEEEeC
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR------KYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~------d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+++...+ ..|++||+.+|+.+..+....+.|..+.+++ ++ .++++.+.. ..+.++++
T Consensus 322 ~~~l~sgs~D--~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~-~~l~sgs~D---g~i~iW~~ 387 (393)
T 1erj_A 322 DEYILSGSKD--RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY-NVFATGSGD---CKARIWKY 387 (393)
T ss_dssp GCEEEEEETT--SEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC-EEEEEEETT---SEEEEEEE
T ss_pred CCEEEEEeCC--CeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC-CEEEEECCC---CcEEECcc
Confidence 5666666666 4799999998988777776656666665554 33 344554443 35777766
No 260
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.27 E-value=1.9e-09 Score=115.79 Aligned_cols=237 Identities=11% Similarity=0.061 Sum_probs=150.4
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
..++|||||++|+..... ..|++||+.+++...............|+|||+.|+....+.
T Consensus 60 ~~~~~s~~g~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------------- 119 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLD-----GHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEG--------------- 119 (420)
T ss_dssp TTCEEEEEETTEEEEEET-----TEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTS---------------
T ss_pred cceeeeecCCeEEEEEcC-----CcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCC---------------
Confidence 468999999999977653 379999999887543222222124457899999988776432
Q ss_pred cEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 304 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~ 304 (734)
.|.+|++.++. .+.....+...+..+.|+|||++|+.... ...|++||+.++. ....+.....
T Consensus 120 -~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----d~~i~iwd~~~~~--------~~~~~~~h~~ 182 (420)
T 3vl1_A 120 -DIKVLDSNFNL----QREIDQAHVSEITKLKFFPSGEALISSSQ----DMQLKIWSVKDGS--------NPRTLIGHRA 182 (420)
T ss_dssp -CEEEECTTSCE----EEEETTSSSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC--------CCEEEECCSS
T ss_pred -CEEEEeCCCcc----eeeecccccCccEEEEECCCCCEEEEEeC----CCeEEEEeCCCCc--------CceEEcCCCC
Confidence 58888877542 22222234446778999999998875432 2589999998732 2233333333
Q ss_pred ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEE---------------------e
Q psy4818 305 HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAA---------------------V 361 (734)
Q Consensus 305 ~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~---------------------~ 361 (734)
..... |+|+++.|+..+.. ..|..||+.++.. ...+.... ....+..+.+ .
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLD----GTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp CEEEEEEETTTTEEEEEETT----SCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred cEEEEEEcCCCCEEEEEcCC----CcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 33443 99999988765543 4588999876541 12222111 1122222222 2
Q ss_pred eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++.++++...+ ..|.+||+.+++.+..+... .+.+..+.+++++..++++.+.. ..++.||+
T Consensus 257 ~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~ 320 (420)
T 3vl1_A 257 TYGKYVIAGHVS--GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDL 320 (420)
T ss_dssp CTTEEEEEEETT--SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEET
T ss_pred CCCCEEEEEcCC--CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEc
Confidence 235666666655 46999999888876666543 56678889999987455554433 47999999
No 261
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.26 E-value=2.2e-09 Score=114.60 Aligned_cols=236 Identities=10% Similarity=0.070 Sum_probs=139.9
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-------------------ccccCeeEEEcCCcEEE
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-------------------NVKFPSISWTHDHKGFF 203 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-------------------~~~~~~~~wSpDg~~l~ 203 (734)
.+..++|||||++||...+ ..+.+|++.+|+.+..... ...+..++|||||+.|+
T Consensus 66 ~V~~v~fspdg~~la~g~~------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCN------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CCCEEEECTTSSEEEEECB------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCEEEEEcC------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 3678999999999997542 2588899988874321110 01135789999999888
Q ss_pred EEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 204 YNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 204 y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
....+. .|++|++.+.. .+..+. .+...+..+.|+|||++|+... ....|.+||+.
T Consensus 140 s~~~d~----------------~i~iwd~~~~~--~~~~~~--~h~~~v~~~~~~p~~~~l~s~s----~d~~v~iwd~~ 195 (393)
T 1erj_A 140 TGAEDR----------------LIRIWDIENRK--IVMILQ--GHEQDIYSLDYFPSGDKLVSGS----GDRTVRIWDLR 195 (393)
T ss_dssp EEETTS----------------CEEEEETTTTE--EEEEEC--CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETT
T ss_pred EEcCCC----------------eEEEEECCCCc--EEEEEc--cCCCCEEEEEEcCCCCEEEEec----CCCcEEEEECC
Confidence 766432 68889987653 122232 2344567899999999987433 22689999998
Q ss_pred CCCCCcccCCCCceeeeccccceEE-EEEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec-----CCCCceeE
Q psy4818 284 SLPDGKISGKFPLKTVIPGMDHHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-----EDENRTLD 356 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-----~~~~~~~~ 356 (734)
++. ............. .|+| +|+.|+..+. +..|..+|+.++.. ...+.. ......+.
T Consensus 196 ~~~---------~~~~~~~~~~v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 196 TGQ---------CSLTLSIEDGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGFL--VERLDSENESGTGHKDSVY 260 (393)
T ss_dssp TTE---------EEEEEECSSCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCCE--EEEEC------CCCSSCEE
T ss_pred CCe---------eEEEEEcCCCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCCcE--EEeecccccCCCCCCCCEE
Confidence 731 1111122222222 3788 6776665443 24588899876541 122211 11123455
Q ss_pred EEEEeeCCEEEEEEEeCCceeEEEEECCCCce------------eeeeCCCCceEEeeccCcccceEEEEEecCCCCceE
Q psy4818 357 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR------------LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 424 (734)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~------------~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~ 424 (734)
.+.+..++.++++...+ ..|.+||+.+++. ...+......+..+.+++++..++ +.+.. ..+
T Consensus 261 ~v~~~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D---~~v 334 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLD--RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKD---RGV 334 (393)
T ss_dssp EEEECTTSSEEEEEETT--SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEETT---SEE
T ss_pred EEEECCCCCEEEEEeCC--CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeCC---CeE
Confidence 56665556667777666 4788999865332 122323344566777888775444 44332 478
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
+.||+
T Consensus 335 ~iwd~ 339 (393)
T 1erj_A 335 LFWDK 339 (393)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99998
No 262
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.26 E-value=2.5e-09 Score=120.23 Aligned_cols=231 Identities=11% Similarity=0.089 Sum_probs=145.8
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|||||++||..... ..|.+||.. ++.+. ..........++|||||+.|+....+.
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~----------- 407 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDD-----KTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK----------- 407 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTS-----------
T ss_pred CCEEEEEECCCCCEEEEEeCC-----CEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCC-----------
Confidence 346789999999999876532 368999964 44322 222222346789999999988766432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|++++.... ++.....+...+..++||||+++|+.... ...|.+|++.+ .....+.
T Consensus 408 -----~v~~~~~~~~-----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~---------~~~~~~~ 464 (577)
T 2ymu_A 408 -----TVKLWNRNGQ-----LLQTLTGHSSSVWGVAFSPDDQTIASASD----DKTVKLWNRNG---------QLLQTLT 464 (577)
T ss_dssp -----EEEEECTTCC-----EEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTS---------CEEEEEE
T ss_pred -----EEEEEeCCCC-----EEEEecCCCCCeEEEEECCCCCEEEEEcC----CCEEEEEECCC---------CEEEEEc
Confidence 5777775332 12222223335668999999999885432 25789999765 1123333
Q ss_pred ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
......... |+|||+.|+..+. +..|..++.++.. ...+..+. ..+..+.+..++.++++...++ .|+
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~----d~~i~iw~~~~~~---~~~~~~h~--~~v~~l~~s~dg~~l~s~~~dg--~v~ 533 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASD----DKTVKLWNRNGQL---LQTLTGHS--SSVRGVAFSPDGQTIASASDDK--TVK 533 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEET----TSEEEEEETTSCE---EEEEECCS--SCEEEEEECTTSSCEEEEETTS--EEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeC----CCEEEEEcCCCCE---EEEEeCCC--CCEEEEEEcCCCCEEEEEECcC--EEE
Confidence 333333333 9999998775544 3468889975432 33333332 3445555555566677776664 799
Q ss_pred EEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEe
Q psy4818 380 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 428 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d 428 (734)
+||. +|+.+..+..+.+.|..+.++||++.++ +.+.. ..+..||
T Consensus 534 lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~-s~~~D---~~i~~Wd 577 (577)
T 2ymu_A 534 LWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIA-SASSD---KTVKLWN 577 (577)
T ss_dssp EECT-TSCEEEEEECCSSCEEEEEECTTSSCEE-EEETT---SCEEEEC
T ss_pred EEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE-EEeCC---CEEEEeC
Confidence 9997 7887788877777788899999987664 43332 2466654
No 263
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.26 E-value=4.2e-09 Score=108.95 Aligned_cols=238 Identities=10% Similarity=0.053 Sum_probs=147.2
Q ss_pred cEEEeeEEeCCC----CcEEEEEEeCCCCceEEEEEEECCCCCcc-cccc--cccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 141 TTALKLYAFSDN----GKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVL--KNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 141 ~~~~~~~~~SPD----G~~la~~~~~~g~~~~~l~v~dl~~g~~~-~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
...+..++|||+ +++|+-.. .. ..|.+||+.+++.. ..+. ....+..+.|+|+++.++-...+.
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs-~D----~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~---- 102 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGS-LD----DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA---- 102 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEE-TT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS----
T ss_pred CCcEEEEEEecCCCCCCCEEEEEc-CC----CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC----
Confidence 345788999986 45565433 22 36889998776531 1111 112236789999998776655432
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++.++.. +..+.. .......+.|+|||++|+... ....|.+|++.++.
T Consensus 103 ------------~i~lWd~~~~~~--~~~~~~--~~~~~~~~~~spdg~~l~~g~----~dg~v~i~~~~~~~------- 155 (321)
T 3ow8_A 103 ------------HIRLWDLENGKQ--IKSIDA--GPVDAWTLAFSPDSQYLATGT----HVGKVNIFGVESGK------- 155 (321)
T ss_dssp ------------EEEEEETTTTEE--EEEEEC--CTTCCCCEEECTTSSEEEEEC----TTSEEEEEETTTCS-------
T ss_pred ------------cEEEEECCCCCE--EEEEeC--CCccEEEEEECCCCCEEEEEc----CCCcEEEEEcCCCc-------
Confidence 788999877532 222222 122334689999999988532 23689999998731
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
....+.......... |+|||+.|+..+.. ..|..+|+.++. ....+... ...+..+.+..++.++++...
T Consensus 156 -~~~~~~~~~~~v~~~~~spdg~~lasg~~d----g~i~iwd~~~~~---~~~~~~~h-~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 156 -KEYSLDTRGKFILSIAYSPDGKYLASGAID----GIINIFDIATGK---LLHTLEGH-AMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp -EEEEEECSSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---EEEEECCC-SSCCCEEEECTTSCEEEEECT
T ss_pred -eeEEecCCCceEEEEEECCCCCEEEEEcCC----CeEEEEECCCCc---EEEEEccc-CCceeEEEEcCCCCEEEEEcC
Confidence 112222222222333 99999988765543 458899998764 22223322 234455556555667777666
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ ..|.+||+.+++....+....+.+..+.++|++..++ +.+.. ..+.++|+
T Consensus 227 d--g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~D---~~v~iwd~ 277 (321)
T 3ow8_A 227 D--GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV-SSSSD---KSVKVWDV 277 (321)
T ss_dssp T--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETT---SCEEEEET
T ss_pred C--CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE-EEeCC---CcEEEEeC
Confidence 5 4699999988887777776666788889999887554 33332 36899998
No 264
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2.9e-10 Score=122.01 Aligned_cols=247 Identities=8% Similarity=0.041 Sum_probs=149.3
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC---CC-ccc-ccccccccCeeEEEcC-CcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT---GK-DYP-EVLKNVKFPSISWTHD-HKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~---g~-~~~-~~~~~~~~~~~~wSpD-g~~l~y~~~~~~~~~~~ 215 (734)
..+..++|||||++|+..... ..|++||+.+ +. .+. .......+..+.|+|| ++.|+....+
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------- 135 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN------- 135 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-------
T ss_pred CceEEEEECCCCCeEEEEccC-----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-------
Confidence 457899999999999876542 3599999987 22 222 1122223478999999 6655544322
Q ss_pred CCcccccCCcEEEEEECCCCCC-----CCeeEEecCCCCeeEEEEEEecCC-cEEEEEEecCCCCceEEEEeCCCCCCCc
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCG-RYLLVSTSNNTQGSDLHYFDLHSLPDGK 289 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~-----~~~~v~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 289 (734)
..|++|++.+... ....+.....+...+..+.|+||+ +.|+ +.. ....|.+||+.++.
T Consensus 136 ---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~---~dg~v~iwd~~~~~--- 199 (416)
T 2pm9_A 136 ---------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFA-SAG---SSNFASIWDLKAKK--- 199 (416)
T ss_dssp ---------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEE-EES---SSSCEEEEETTTTE---
T ss_pred ---------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEE-EEc---CCCCEEEEECCCCC---
Confidence 2688888877641 011110111223345678999995 5554 332 22579999998721
Q ss_pred ccCCCCceeeecc------ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec-CCCCceeEEEEEe
Q psy4818 290 ISGKFPLKTVIPG------MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-EDENRTLDVVAAV 361 (734)
Q Consensus 290 l~~~~~~~~l~~~------~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 361 (734)
....+... ....... |+|++..+++....++....|..+|+.+... ....+. .. ...+..+.+.
T Consensus 200 -----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~-~~~v~~~~~s 271 (416)
T 2pm9_A 200 -----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--PLQTLNQGH-QKGILSLDWC 271 (416)
T ss_dssp -----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--CSBCCCSCC-SSCEEEEEEC
T ss_pred -----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--CcEEeecCc-cCceeEEEeC
Confidence 11112111 1222333 9999866655555443334688899876431 122222 22 2344555554
Q ss_pred e-CCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 A-NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~-~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. ++.++++...+ ..|++||+.+++.+..+....+.+..+.+++++..++++.+.. ..+.+||+
T Consensus 272 ~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---~~i~iw~~ 335 (416)
T 2pm9_A 272 HQDEHLLLSSGRD--NTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD---NKIEVQTL 335 (416)
T ss_dssp SSCSSCEEEEESS--SEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS---SEEEEEES
T ss_pred CCCCCeEEEEeCC--CCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC---CcEEEEEc
Confidence 3 46667776666 4799999988988777776666677888899885566555443 47899998
No 265
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.24 E-value=9.7e-09 Score=105.25 Aligned_cols=238 Identities=7% Similarity=-0.011 Sum_probs=145.7
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+....|+|||++|+-... ...|++||+.+|+.+.... ....+..++|+||++.|+-...+.
T Consensus 57 ~v~~~~~~~~~~~l~s~s~-----d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~------------ 119 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSD-----DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL------------ 119 (304)
T ss_dssp CEEEEEEEGGGTEEEEEET-----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS------------
T ss_pred cEEEEEEeCCCCEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCC------------
Confidence 4778999999999986553 2479999999998643222 222346899999999887655432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
.|.+|++.++.. ....+. .+...+..++|+| |++.|+- .. ....|.+||+.++. ....+.
T Consensus 120 ----~v~lWd~~~~~~-~~~~~~--~h~~~v~~v~~~p~~~~~l~s-gs---~D~~v~iwd~~~~~--------~~~~~~ 180 (304)
T 2ynn_A 120 ----TVKLWNWENNWA-LEQTFE--GHEHFVMCVAFNPKDPSTFAS-GC---LDRTVKVWSLGQST--------PNFTLT 180 (304)
T ss_dssp ----CEEEEEGGGTTE-EEEEEC--CCCSCEEEEEECTTCTTEEEE-EE---TTSEEEEEETTCSS--------CSEEEE
T ss_pred ----eEEEEECCCCcc-hhhhhc--ccCCcEEEEEECCCCCCEEEE-Ee---CCCeEEEEECCCCC--------ccceec
Confidence 688888876421 111222 2344677899999 5676663 22 22689999997621 222232
Q ss_pred ccccceEE--EEEe--cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 301 PGMDHHHE--IIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 301 ~~~~~~~~--~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
.+...... .+++ ++..|+-.+. +..|..||+.++. ....+... ...+..+.+..++.++++...+ .
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~~---~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~D--g 250 (304)
T 2ynn_A 181 TGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKS---CVATLEGH-MSNVSFAVFHPTLPIIISGSED--G 250 (304)
T ss_dssp CCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTTE---EEEEEECC-SSCEEEEEECSSSSEEEEEETT--S
T ss_pred cCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCCc---cceeeCCC-CCCEEEEEECCCCCEEEEEcCC--C
Confidence 22222222 2555 5555554333 3569999998764 22223332 2344555555546677777766 4
Q ss_pred eEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|.+||+.+++.++.+......+..+.++|++...++...+. ..+..+++
T Consensus 251 ~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~---~g~~~~~~ 300 (304)
T 2ynn_A 251 TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD---NGFTVLSL 300 (304)
T ss_dssp CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET---TEEEEEEC
T ss_pred eEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC---CceEEEEe
Confidence 799999998988888876655566777777765443333322 24555665
No 266
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.24 E-value=3.5e-10 Score=121.38 Aligned_cols=257 Identities=11% Similarity=0.077 Sum_probs=149.4
Q ss_pred EEeeEEeCCCCcEEEEEEeCCC------CceEEEEEEECCCCCc---ccccccccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSG------SDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g------~~~~~l~v~dl~~g~~---~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
.+..++|||||+.++++.+..| +....|++||+.+++. +........+..++|+|||+.|+....+.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---- 89 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNG---- 89 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSS----
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCC----
Confidence 3567899999985554543333 4456899999998752 22222233446899999999888776432
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC-CcEEEEEEecCCCCceEEEEeCCCCCCCccc-
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC-GRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS- 291 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~- 291 (734)
.|.++++.+.......+.....+...+..+.|+|| +++|+. .. ....|++||+.++......
T Consensus 90 ------------~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-~~---~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 90 ------------SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLAS-GG---NNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp ------------CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEE-EC---SSSCEEBCBTTTTSSCTTTC
T ss_pred ------------eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEE-Ec---CCCeEEEEECCCCccccccc
Confidence 58888887632212133333333445567899999 676653 22 2257999999873210000
Q ss_pred CCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-----CceeEEEEEeeC-C
Q psy4818 292 GKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAVAN-N 364 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~-~ 364 (734)
................. .|+|++..+++.... +..|..+|+.++. ....+.... ...+..+.+..+ .
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS---SNFASIWDLKAKK---EVIHLSYTSPNSGIKQQLSVVEWHPKNS 227 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS---SSCEEEEETTTTE---EEEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcC---CCCEEEEECCCCC---cceEEeccccccccCCceEEEEECCCCC
Confidence 00000001112222233 389996555555543 3459999998754 222222211 234555555543 3
Q ss_pred EEEEEEEeCC-ceeEEEEECCCC-ceeeeeC-CCCceEEeeccCc-ccceEEEEEecCCCCceEEEEeC
Q psy4818 365 KLIVHYIQNV-RSVMDLHDLNTG-KRLHSFP-LDLGQITHISGRR-KYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 365 ~l~~~~~~~~-~~~l~~~dl~~g-~~~~~l~-~~~g~v~~~~~~~-d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+++....++ ...|++||+.++ +....+. .....+..+.+++ ++. ++++.+.. ..+..||+
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~d---g~v~~wd~ 292 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRD---NTVLLWNP 292 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESS---SEEEEECS
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCC---CCEEEeeC
Confidence 5666665553 237999999776 4445555 4556677888888 554 44444432 46999998
No 267
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.24 E-value=4.8e-12 Score=139.75 Aligned_cols=223 Identities=16% Similarity=0.157 Sum_probs=131.5
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCC-ccccHH-H-HHHH-HhcCeEEEEEecccCCCCCchhhhcc---cccc
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSIS-R-CMFL-RHFNGIYAIPNIRGGGELGEDWHNAG---RLLK 544 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~-~-~~~l-~~~G~~v~~~~~rG~~~~g~~~~~~~---~~~~ 544 (734)
+.+.++.|+....+++.|+||++|||...... ..+... + ...+ ...|++|+.+|||.+. +| |.... ....
T Consensus 106 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~g--f~~~~~~~~~~~ 182 (544)
T 1thg_A 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FG--FLGGDAITAEGN 182 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSHHHHHHTC
T ss_pred eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-cc--CCCcccccccCC
Confidence 56677889765445678999999998543322 233321 1 1112 2348999999999754 22 11100 0112
Q ss_pred CCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--------CCceeEEEEcCCcchhcccccccc
Q psy4818 545 KQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLRFNKFTI 613 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~~~ 613 (734)
+...+.|+.+|++|+.++- -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|............
T Consensus 183 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~ 262 (544)
T 1thg_A 183 TNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDSSSVG 262 (544)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCSSSCCSS
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccCcCChHH
Confidence 3345899999999998762 37999999999999999999887642 458999999998542211111001
Q ss_pred Ccc----cccccCCCCCH---HHHHHHHhCCccCCCCCCC--C--C-ccCCc-EEEEecCCCCCCCChHHHHHHHHHHhh
Q psy4818 614 AYY----SESEFGSPNNK---THFHNLLSYSPLHNIKVPP--N--N-TQYPA-TLVLTGDHDDRVPPLHSYKFIATLQEK 680 (734)
Q Consensus 614 ~~~----~~~~~g~~~~~---~~~~~~~~~sp~~~~~~p~--~--~-~~~P~-~Li~~g~~D~~v~~~~~~~~~~~L~~~ 680 (734)
... .....|.+... +..+-|++.++..-+.... . . ...++ .+......|..+.+.+..++.++.+..
T Consensus 263 ~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~g~~~ 342 (544)
T 1thg_A 263 PDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELFRSGRYA 342 (544)
T ss_dssp SSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSCHHHHHHTTCSC
T ss_pred HHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcCHHHHHhcCCCC
Confidence 110 11123433211 3344455544422111000 0 0 00000 122344567778888888777655444
Q ss_pred hCCCCCCCCcEEEEEeCCCCCCCC
Q psy4818 681 IGSLPYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~gH~~~ 704 (734)
++|+.+-...++||.+.
T Consensus 343 -------~vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 343 -------KVPYISGNQEDEGTAFA 359 (544)
T ss_dssp -------CCCEEEEEETBTTTTTG
T ss_pred -------CccEEEEeecCchhhhc
Confidence 88999999999999875
No 268
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.23 E-value=3.1e-09 Score=124.84 Aligned_cols=274 Identities=8% Similarity=-0.024 Sum_probs=165.7
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 175 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl 175 (734)
+.|+|.+++....++ .-.+| +...+.....+. .+...+..++|||||++||.+.. . ..|++||+
T Consensus 21 ~sp~~~~la~~~~~g---~v~iw--d~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~-d----g~i~vw~~ 84 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSG---RVEIW--NYETQVEVRSIQ------VTETPVRAGKFIARKNWIIVGSD-D----FRIRVFNY 84 (814)
T ss_dssp ECSSSSEEEEEETTS---EEEEE--ETTTTEEEEEEE------CCSSCEEEEEEEGGGTEEEEEET-T----SEEEEEET
T ss_pred ECCCCCEEEEEeCCC---EEEEE--ECCCCceEEEEe------cCCCcEEEEEEeCCCCEEEEEeC-C----CeEEEEEC
Confidence 346777777654322 23344 333333222222 12234789999999999998764 2 47999999
Q ss_pred CCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEE
Q psy4818 176 DTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 254 (734)
Q Consensus 176 ~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~ 254 (734)
.+|+.+.... .......++|+|||+.|+....+. .|.+|++.++.. ....+. .+...+..
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------------~i~vw~~~~~~~-~~~~~~--~~~~~v~~ 145 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL----------------TVKLWNWENNWA-LEQTFE--GHEHFVMC 145 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS----------------EEEEEEGGGTSE-EEEEEE--CCSSCEEE
T ss_pred CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC----------------EEEEEECCCCce-EEEEEc--CCCCcEEE
Confidence 9998644222 222346899999999988665432 688888876521 112222 23345678
Q ss_pred EEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc-cceEE-EEEe--cCCeEEEEeCCCCCCce
Q psy4818 255 SEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-DHHHE-IIAN--NGPELIVKTTKNAPKGK 329 (734)
Q Consensus 255 ~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-~~~~~-~~s~--dg~~l~~~s~~~~~~~~ 329 (734)
+.|+| ||+.|+.... ...|++||+.++. ....+.... ..... .|+| ++..|+..+. +..
T Consensus 146 ~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~ 209 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCL----DRTVKVWSLGQST--------PNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLT 209 (814)
T ss_dssp EEEETTEEEEEEEEET----TSEEEEEETTCSS--------CSEEEECCCTTCCCEEEECCSTTCCEEEEECT----TSE
T ss_pred EEEEcCCCCEEEEEeC----CCeEEEEECCCCc--------ceeEEecCCCCCEEEEEEEECCCCCEEEEEeC----CCE
Confidence 99999 7877775432 2579999997721 222232222 22222 3888 7776665443 346
Q ss_pred EEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccc
Q psy4818 330 VVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN 409 (734)
Q Consensus 330 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~ 409 (734)
|..+|+.++. ....+... ...+..+.+..++.++++...+ ..|++||+.+++.+..+..+...+..+.+++++.
T Consensus 210 i~~~d~~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 210 IKIWDYQTKS---CVATLEGH-MSNVSFAVFHPTLPIIISGSED--GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR 283 (814)
T ss_dssp EEEEETTTTE---EEEEEECC-SSCEEEEEECSSSSEEEEEETT--SCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG
T ss_pred EEEEECCCCc---EEEEEcCC-CCCEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC
Confidence 9999987654 22223322 2345555555546666666655 4799999988888777776666677888888877
Q ss_pred eEEEEEecCCCCceEEEEeC
Q psy4818 410 EVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 410 ~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+++...+.. .+..+++
T Consensus 284 ~~~~~~~~~~---~~~~~~~ 300 (814)
T 3mkq_A 284 KNYIASGFDN---GFTVLSL 300 (814)
T ss_dssp GGEEEEEETT---EEEEEEC
T ss_pred ceEEEEEeCC---CEEEEEc
Confidence 5544333322 3455554
No 269
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.23 E-value=4.4e-09 Score=116.94 Aligned_cols=250 Identities=11% Similarity=0.081 Sum_probs=147.3
Q ss_pred EeeEEeCC----CCcEEEEEEeCCCCceEEEEEEECCCCCccccccc------------ccccCeeEEEcCCcEEEEEEE
Q psy4818 144 LKLYAFSD----NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK------------NVKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 144 ~~~~~~SP----DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~------------~~~~~~~~wSpDg~~l~y~~~ 207 (734)
...++||| ||++|+.+.... .+|.+||..+++.+..... .....++.+|||++.+++...
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 56789999 999987665433 3689999999886542211 112357899999998776542
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
. ..+|+++++.+...- .+...+. ..+..++.|||||++++.... ..+.|.+||+.++.
T Consensus 300 ~---------------~g~i~vvd~~~~~~l--~~~~i~~-~~~~~~~~~spdg~~l~va~~---~~~~v~v~D~~tg~- 357 (543)
T 1nir_A 300 E---------------TGKVLLVNYKDIDNL--TVTSIGA-APFLHDGGWDSSHRYFMTAAN---NSNKVAVIDSKDRR- 357 (543)
T ss_dssp T---------------TTEEEEEECTTSSSC--EEEEEEC-CSSCCCEEECTTSCEEEEEEG---GGTEEEEEETTTTE-
T ss_pred C---------------CCeEEEEEecCCCcc--eeEEecc-CcCccCceECCCCCEEEEEec---CCCeEEEEECCCCe-
Confidence 1 237999998765321 2111111 124456899999999876543 22579999998832
Q ss_pred CcccCCCCceeeec-----cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC----CCceEeecCCCCceeEEE
Q psy4818 288 GKISGKFPLKTVIP-----GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE----KNWKTLIPEDENRTLDVV 358 (734)
Q Consensus 288 ~~l~~~~~~~~l~~-----~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~~~ 358 (734)
....+. ....+...++|+++.+|+..+.. ...|.++++++... -++...++......+.-.
T Consensus 358 --------l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 358 --------LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp --------EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred --------EEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE
Confidence 111111 11122333567877776654422 34688888876210 112222332212222222
Q ss_pred EEeeCCEEEEEEEeC----CceeEEEEECCCCcee-eeeC--------CCCceEEeeccCcccceEEEEEec-CCCCceE
Q psy4818 359 AAVANNKLIVHYIQN----VRSVMDLHDLNTGKRL-HSFP--------LDLGQITHISGRRKYNEVFYGFTS-FLQPGTI 424 (734)
Q Consensus 359 ~~~~~~~l~~~~~~~----~~~~l~~~dl~~g~~~-~~l~--------~~~g~v~~~~~~~d~~~l~~~~ss-~~~P~~~ 424 (734)
..++++.|++...-+ ....|.+||+++++.. +.|. .+...+..+.++++++.++++.-+ -.....|
T Consensus 428 ~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 428 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 234434555433111 1347999999888865 4442 223456678899999999987532 2446789
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
.++|.
T Consensus 508 ~v~D~ 512 (543)
T 1nir_A 508 VVVDD 512 (543)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99998
No 270
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.23 E-value=9.3e-12 Score=126.05 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=72.6
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++||...... .|.. ....|++ +|.|+++|.||.|.... . ....+++++.+.+..|++. .+.
T Consensus 27 ~p~vvllHG~~~~~~--~w~~-~~~~L~~-~~rvia~DlrGhG~S~~---~-----~~~~~~~~~a~dl~~ll~~--l~~ 92 (276)
T 2wj6_A 27 GPAILLLPGWCHDHR--VYKY-LIQELDA-DFRVIVPNWRGHGLSPS---E-----VPDFGYQEQVKDALEILDQ--LGV 92 (276)
T ss_dssp SCEEEEECCTTCCGG--GGHH-HHHHHTT-TSCEEEECCTTCSSSCC---C-----CCCCCHHHHHHHHHHHHHH--HTC
T ss_pred CCeEEEECCCCCcHH--HHHH-HHHHHhc-CCEEEEeCCCCCCCCCC---C-----CCCCCHHHHHHHHHHHHHH--hCC
Confidence 478999999765544 3444 3456764 89999999999664321 1 1234566666655555554 234
Q ss_pred CcEEEEEcChHHHHHHHHHhcC-CCceeEEEEcCC
Q psy4818 568 KYITIMGGSNGGLLVGACLNQR-PELYGAALILVG 601 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~ 601 (734)
+++.++|||+||.+++.++.++ |++++++|+..+
T Consensus 93 ~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 93 ETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp CSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 5899999999999999999999 999999988764
No 271
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.22 E-value=7e-09 Score=111.33 Aligned_cols=238 Identities=12% Similarity=0.089 Sum_probs=149.1
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++|+-... . ..|++||+.+++.+.... ....+..+.|+|||+.|+....+.
T Consensus 150 ~~~V~~v~~~~~~~~l~sgs~-D----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~---------- 214 (410)
T 1vyh_C 150 TDSVQDISFDHSGKLLASCSA-D----MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK---------- 214 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEET-T----SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTS----------
T ss_pred CCcEEEEEEcCCCCEEEEEeC-C----CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC----------
Confidence 345788999999998886543 2 369999999887543222 222346889999999887665432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|.+|++.++.. +..+. .+...+..+.++|||++|+.... ...|.+||+.++. ....+
T Consensus 215 ------~i~~wd~~~~~~--~~~~~--~h~~~v~~~~~~~~g~~l~s~s~----D~~v~vwd~~~~~--------~~~~~ 272 (410)
T 1vyh_C 215 ------TIKMWEVQTGYC--VKTFT--GHREWVRMVRPNQDGTLIASCSN----DQTVRVWVVATKE--------CKAEL 272 (410)
T ss_dssp ------EEEEEETTTCCE--EEEEE--CCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC--------EEEEE
T ss_pred ------eEEEEECCCCcE--EEEEe--CCCccEEEEEECCCCCEEEEEcC----CCeEEEEECCCCc--------eeeEe
Confidence 789999987642 22333 23446678899999998874332 2579999998731 11112
Q ss_pred eccccceEEE-EEec--------------------CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEE
Q psy4818 300 IPGMDHHHEI-IANN--------------------GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 358 (734)
Q Consensus 300 ~~~~~~~~~~-~s~d--------------------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~ 358 (734)
.......... |+|+ |..|+ .... +..|..||+.++.. ...+..+. ..+..+
T Consensus 273 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-sgs~---D~~i~iwd~~~~~~--~~~~~~h~--~~v~~v 344 (410)
T 1vyh_C 273 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSR---DKTIKMWDVSTGMC--LMTLVGHD--NWVRGV 344 (410)
T ss_dssp CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE-EEET---TSEEEEEETTTTEE--EEEEECCS--SCEEEE
T ss_pred cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE-EEeC---CCeEEEEECCCCce--EEEEECCC--CcEEEE
Confidence 2222222222 6665 33344 3322 34699999987641 23333332 344555
Q ss_pred EEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 359 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 359 ~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..++..+++...+ ..|++||+.+++.+..+......|.++.+++++..++ +.+.. ..+..|++
T Consensus 345 ~~~~~g~~l~s~s~D--~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-sgs~D---~~i~vW~~ 409 (410)
T 1vyh_C 345 LFHSGGKFILSCADD--KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVD---QTVKVWEC 409 (410)
T ss_dssp EECSSSSCEEEEETT--TEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE-EEETT---SEEEEEC-
T ss_pred EEcCCCCEEEEEeCC--CeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE-EEeCC---CcEEEEeC
Confidence 555546666676666 4799999988887777776666788888998886554 33332 35666654
No 272
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.21 E-value=5.5e-09 Score=112.02 Aligned_cols=235 Identities=12% Similarity=0.061 Sum_probs=146.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccc---------------cCeeEEEcCCcEEEEE
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVK---------------FPSISWTHDHKGFFYN 205 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~---------------~~~~~wSpDg~~l~y~ 205 (734)
..+..+.|+|||++|+.... . ..|++||+.+++.+.... .... ...+.|+|++. ++..
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 223 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDV-E----NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIP 223 (425)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEE
T ss_pred ccEEEEEECCCCCEEEEEec-C----CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEE
Confidence 34788999999999886653 2 359999999887543211 1111 46789999875 4443
Q ss_pred EEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 206 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
..+ ..|+++++.+... +..+.. +...+..+.|+|||++|+.... ...|++||+.++
T Consensus 224 ~~~----------------g~i~~~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~ 279 (425)
T 1r5m_A 224 GPK----------------GAIFVYQITEKTP--TGKLIG--HHGPISVLEFNDTNKLLLSASD----DGTLRIWHGGNG 279 (425)
T ss_dssp CGG----------------GCEEEEETTCSSC--SEEECC--CSSCEEEEEEETTTTEEEEEET----TSCEEEECSSSB
T ss_pred cCC----------------CeEEEEEcCCCce--eeeecc--CCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCC
Confidence 322 2688999887643 223322 2335678999999998875432 257999999873
Q ss_pred CCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC
Q psy4818 286 PDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 364 (734)
Q Consensus 286 ~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 364 (734)
. ....+.......... |+|++ .++..+. +..|..+|+.++. ....+... ...+..+.+..++
T Consensus 280 ~--------~~~~~~~~~~~i~~~~~~~~~-~l~~~~~----d~~i~i~d~~~~~---~~~~~~~~-~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 280 N--------SQNCFYGHSQSIVSASWVGDD-KVISCSM----DGSVRLWSLKQNT---LLALSIVD-GVPIFAGRISQDG 342 (425)
T ss_dssp S--------CSEEECCCSSCEEEEEEETTT-EEEEEET----TSEEEEEETTTTE---EEEEEECT-TCCEEEEEECTTS
T ss_pred c--------cceEecCCCccEEEEEECCCC-EEEEEeC----CCcEEEEECCCCc---EeEecccC-CccEEEEEEcCCC
Confidence 1 222222222233333 89988 4444333 3469999997754 23333332 2345555555545
Q ss_pred EEEEEEEeCCceeEEEEECCCCc--------------------eeeeeCCCCc--eEEeeccCcccceEEEEEecCCCCc
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGK--------------------RLHSFPLDLG--QITHISGRRKYNEVFYGFTSFLQPG 422 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~--------------------~~~~l~~~~g--~v~~~~~~~d~~~l~~~~ss~~~P~ 422 (734)
.++++...+ ..|++|++.+++ .+..+..... .+..+.++++++.++....+ .
T Consensus 343 ~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g 416 (425)
T 1r5m_A 343 QKYAVAFMD--GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL----Q 416 (425)
T ss_dssp SEEEEEETT--SCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS----S
T ss_pred CEEEEEECC--CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC----c
Confidence 666666655 478999997776 5666665533 78889999998766544332 3
Q ss_pred eEEEEeC
Q psy4818 423 TIYHCNI 429 (734)
Q Consensus 423 ~~~~~d~ 429 (734)
.++.||+
T Consensus 417 ~i~iw~~ 423 (425)
T 1r5m_A 417 EGSVVAI 423 (425)
T ss_dssp CCEEEEC
T ss_pred eEEEEee
Confidence 5778887
No 273
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.21 E-value=1.5e-10 Score=114.14 Aligned_cols=212 Identities=13% Similarity=0.056 Sum_probs=124.4
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCe--EEEEEecccCCCC---Cc--hhh-----hccccccCCC----chhH
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG--IYAIPNIRGGGEL---GE--DWH-----NAGRLLKKQN----CFDD 551 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~~~~---g~--~~~-----~~~~~~~~~~----~~~D 551 (734)
.+.||++||..+.... |. .++..|++.|+ .|+.+|+++.|.. |. ... ..+....... ..++
T Consensus 6 ~~pvvliHG~~~~~~~--~~-~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 6 TTATLFLHGYGGSERS--ET-FMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CEEEEEECCTTCCGGG--TH-HHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCcEEEECCCCCChhH--HH-HHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 4567888997655443 33 34567777886 5888888874421 11 000 0011111111 2456
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC-----ceeEEEEcCCcchhccccccccCcccccccCCCCC
Q psy4818 552 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 626 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 626 (734)
+.+++++|.++. ..+++.++||||||.+++.++.++|+ .++.+|+.++..+.................|.|..
T Consensus 83 l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~ 160 (249)
T 3fle_A 83 IKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSS
T ss_pred HHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcc
Confidence 677788887663 34589999999999999999988764 57888877655443322111111101112344432
Q ss_pred -HHHHHHHHhCCccCCCCCCCCCccCCcEEEEecC------CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC-
Q psy4818 627 -KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD- 698 (734)
Q Consensus 627 -~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~------~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~- 698 (734)
...+..|.+..+ .+.. .+.| +|+++|+ .|..||...++.+...++.. ......+++.|
T Consensus 161 ~~~~~~~l~~~~~--~~p~----~~~~-vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~-------~~~y~e~~v~g~ 226 (249)
T 3fle_A 161 MNAAYRQLLSLYK--IYCG----KEIE-VLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGS-------TKSYQEMKFKGA 226 (249)
T ss_dssp CCHHHHHTGGGHH--HHTT----TTCE-EEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTC-------SSEEEEEEEESG
T ss_pred cCHHHHHHHHHHh--hCCc----cCCe-EEEEeccCCCCCCCCCcccHHHHHHHHHHHhhC-------CCceEEEEEeCC
Confidence 234444433211 1111 2344 9999998 79999998887776666655 55666666765
Q ss_pred -CCCCCCCchHHhHHHHHHHHHHH
Q psy4818 699 -AGHGQGTPLMKSIEEMTDIYVFL 721 (734)
Q Consensus 699 -~gH~~~~~~~~~~~~~~~~~~fl 721 (734)
+.|...... .+....+..||
T Consensus 227 ~a~Hs~l~~n---~~V~~~I~~FL 247 (249)
T 3fle_A 227 KAQHSQLHEN---KDVANEIIQFL 247 (249)
T ss_dssp GGSTGGGGGC---HHHHHHHHHHH
T ss_pred CCchhccccC---HHHHHHHHHHh
Confidence 889876542 35566677776
No 274
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.21 E-value=2.1e-08 Score=104.55 Aligned_cols=223 Identities=10% Similarity=0.010 Sum_probs=140.5
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc---ccc--ccccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY---PEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~---~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
.+...+|||||++||.... ...+.+||+.+++.. ... ..........|++|++ |+....+
T Consensus 99 ~v~~~~~s~~~~~l~s~~~-----d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d--------- 163 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGL-----DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD--------- 163 (340)
T ss_dssp CEEEEEECTTSSEEEEEET-----TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT---------
T ss_pred cEEEEEECCCCCEEEEEeC-----CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC---------
Confidence 3678999999999986553 247999999876421 111 1111235678999886 5444432
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
..|.+|++.++.. +..+. .+...+..+.|+|||++|+... ....|.+||+.++. ...
T Consensus 164 -------~~i~~wd~~~~~~--~~~~~--~h~~~v~~~~~~~~~~~l~sg~----~d~~v~~wd~~~~~--------~~~ 220 (340)
T 1got_B 164 -------TTCALWDIETGQQ--TTTFT--GHTGDVMSLSLAPDTRLFVSGA----CDASAKLWDVREGM--------CRQ 220 (340)
T ss_dssp -------SCEEEEETTTTEE--EEEEC--CCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCS--------EEE
T ss_pred -------CcEEEEECCCCcE--EEEEc--CCCCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCe--------eEE
Confidence 2688899876531 22222 3344567899999999877432 22579999998731 122
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.+.......... |+|+|+.|+..+. +..|..||+.+.. ....+... ....+..+.+..++.++++...+
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~----d~~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-- 291 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRADQ---ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-- 291 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE---EEEEECCTTCCSCEEEEEECTTSSEEEEEETT--
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcC----CCcEEEEECCCCc---EEEEEccCCcccceEEEEECCCCCEEEEECCC--
Confidence 222222233333 8999987775544 3458899987654 12222222 12235556565556777777666
Q ss_pred eeEEEEECCCCceeeeeCCCCceEEeeccCcccceEE
Q psy4818 376 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~ 412 (734)
..+.+||+.+++.+..+....+.|..+.+++++..++
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred CeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEE
Confidence 4799999988887777776677788888998886554
No 275
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.20 E-value=4e-09 Score=109.58 Aligned_cols=249 Identities=11% Similarity=0.009 Sum_probs=132.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC--CCCccc--ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYP--EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~--~g~~~~--~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
+..++|||||++|+++.... ..|.+|++. +|+... ..........++|+|||+.|++....
T Consensus 40 ~~~~~~spdg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------- 104 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN----------- 104 (343)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT-----------
T ss_pred CceEEECCCCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC-----------
Confidence 45789999999988776543 257777766 666321 11111134689999999988877632
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC-CCCCcccCCCCce-
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-LPDGKISGKFPLK- 297 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~-~~~~~l~~~~~~~- 297 (734)
...|+++++..+.. ...+....... ....+.|||||++|++.... ...|++||+.+ +. +. ...
T Consensus 105 ----~~~i~~~d~~~~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~---~~---~~~~ 169 (343)
T 1ri6_A 105 ----AGNVSVTRLEDGLP-VGVVDVVEGLD-GCHSANISPDNRTLWVPALK---QDRICLFTVSDDGH---LV---AQDP 169 (343)
T ss_dssp ----TTEEEEEEEETTEE-EEEEEEECCCT-TBCCCEECTTSSEEEEEEGG---GTEEEEEEECTTSC---EE---EEEE
T ss_pred ----CCeEEEEECCCCcc-ccccccccCCC-CceEEEECCCCCEEEEecCC---CCEEEEEEecCCCc---ee---eecc
Confidence 12577777642111 11111111111 23468899999998765422 25799999876 21 10 000
Q ss_pred -eeecccc-ceE-EEEEecCCeEEEEeCCCCCCceEEEEecCC--CCCCCceEee--cCC--CCceeEEEEEeeC-CEEE
Q psy4818 298 -TVIPGMD-HHH-EIIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKNWKTLI--PED--ENRTLDVVAAVAN-NKLI 367 (734)
Q Consensus 298 -~l~~~~~-~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~--~~~~~~~~l~--~~~--~~~~~~~~~~~~~-~~l~ 367 (734)
.+..... ... ..|+|||+.+|+.... ...|.+++++. +.......+. +.. .......+.+..+ +.++
T Consensus 170 ~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred cccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 1111111 111 2399999988877643 34688888853 3210011111 111 0112334445443 4555
Q ss_pred EEEEeCCceeEEEEECC--CCc--eeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSVMDLHDLN--TGK--RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~--~g~--~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.... ...+.+|++. +++ .+..+... +.+..+.++++++.+++..... .--.+|.+|.
T Consensus 247 v~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~-~~v~v~~~d~ 308 (343)
T 1ri6_A 247 ACDRT--ASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKS-HHISVYEIVG 308 (343)
T ss_dssp EEETT--TTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTT-CEEEEEEEET
T ss_pred EEecC--CCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCC-CeEEEEEEcC
Confidence 54433 3578888885 333 22333322 2255778889888777654322 2223444465
No 276
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.20 E-value=1.6e-08 Score=108.88 Aligned_cols=266 Identities=10% Similarity=0.041 Sum_probs=160.7
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWT 196 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wS 196 (734)
+++-+...|....++... ++...+..++|||||++||..... ..|.+||+++++.+....... ....+++
T Consensus 127 V~lWd~~tg~~~~~~~~~----~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~h~-~~v~~~s 196 (420)
T 4gga_A 127 VYLWSASSGDILQLLQME----QPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS-ARVGSLS 196 (420)
T ss_dssp EEEEETTTCCEEEEEECC----STTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEE
T ss_pred EEEEECCCCCEEEEEEec----CCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeCCC-CceEEEe
Confidence 444454455555555432 123448899999999999876532 369999999998654332222 1234456
Q ss_pred cCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCce
Q psy4818 197 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 276 (734)
Q Consensus 197 pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 276 (734)
+|++.|+....+ ..++.++...... .+..+. .+........|+|+|++++.... ...
T Consensus 197 ~~~~~l~sgs~d----------------~~i~~~d~~~~~~-~~~~~~--~h~~~~~~~~~~~~g~~l~s~~~----D~~ 253 (420)
T 4gga_A 197 WNSYILSSGSRS----------------GHIHHHDVRVAEH-HVATLS--GHSQEVCGLRWAPDGRHLASGGN----DNL 253 (420)
T ss_dssp EETTEEEEEETT----------------SEEEEEETTSSSC-EEEEEE--CCSSCEEEEEECTTSSEEEEEET----TSC
T ss_pred eCCCEEEEEeCC----------------CceeEeeecccce-eeEEec--ccccceeeeeecCCCCeeeeeec----ccc
Confidence 677766655432 2677888766432 222222 23335667899999999885432 257
Q ss_pred EEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCcee
Q psy4818 277 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 355 (734)
Q Consensus 277 i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 355 (734)
+.+|+..++.... ............... .|+|++..++.+... ..+..|..||+.++. ....+... ..+.
T Consensus 254 v~i~~~~~~~~~~----~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~---~~~~~~~~-~~v~ 324 (420)
T 4gga_A 254 VNVWPSAPGEGGW----VPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGA---CLSAVDAH-SQVC 324 (420)
T ss_dssp EEEEESSCCSSCS----CCSEEECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTE---EEEEEECS-SCEE
T ss_pred ceEEeeccccccc----eeeeeecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCccc---cceeeccc-ccee
Confidence 8899987732211 111222222222223 388888777655432 234569999998765 23333332 3344
Q ss_pred EEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 356 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
......+++.+++.. ......|++||+.+++.+..+..+.+.|..+.++|++..|+ +.+.. ..+..||+
T Consensus 325 ~~~~~~~~~~lv~~s-g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s~D---~tvriWdv 393 (420)
T 4gga_A 325 SILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAAD---ETLRLWRC 393 (420)
T ss_dssp EEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETT---TEEEEECC
T ss_pred eeeecCCCCeEEEEE-ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecC---CeEEEEEC
Confidence 444444545555443 22335799999999998888887777888999999987554 44443 36888888
No 277
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.20 E-value=5.9e-09 Score=117.17 Aligned_cols=233 Identities=10% Similarity=0.065 Sum_probs=150.2
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..+..++|||||++|+.... . ..|.+||+.+...............++|+|||+.|+....+.
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~-d----~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------------ 366 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASD-D----KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDK------------ 366 (577)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTS------------
T ss_pred CCeEEEEECCCCCEEEEEeC-C----CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCC------------
Confidence 34678999999999987653 2 358999987765433222222335789999999988766422
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.|.+++.... .+..+. .+...+..++|||||++|+.... ...|.+||... .....+..
T Consensus 367 ----~v~~~~~~~~---~~~~~~--~~~~~v~~~~~s~dg~~l~~~~~----d~~v~~~~~~~---------~~~~~~~~ 424 (577)
T 2ymu_A 367 ----TVKLWNRNGQ---LLQTLT--GHSSSVRGVAFSPDGQTIASASD----DKTVKLWNRNG---------QLLQTLTG 424 (577)
T ss_dssp ----EEEEEETTCC---EEEEEE--CCSSCEEEEEECTTSSCEEEEET----TSEEEEECTTC---------CEEEEEEC
T ss_pred ----EEEEEcCCCC---EEEEec--CCCCCeEEEEECCCCCEEEEEeC----CCEEEEEeCCC---------CEEEEecC
Confidence 5777775322 112222 23335678999999999885432 25789998654 11233333
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
........ |+||++.|+..+. +..|..+++.+.. ...+..+. ..+..+.+..++.++++...+ ..|++
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~~---~~~~~~~~--~~v~~~~~spd~~~las~~~d--~~i~i 493 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASD----DKTVKLWNRNGQL---LQTLTGHS--SSVRGVAFSPDGQTIASASDD--KTVKL 493 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSCE---EEEEECCS--SCEEEEEECTTSCEEEEEETT--SEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEcC----CCEEEEEECCCCE---EEEEcCCC--CCEEEEEEcCCCCEEEEEeCC--CEEEE
Confidence 33333333 8999988776554 3468888975432 33343333 345556565556777777666 47889
Q ss_pred EECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
||. +|+.++.+....+.|..+.++|+++.|+.. +.. ..+.+||.
T Consensus 494 w~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~-~~d---g~v~lwd~ 537 (577)
T 2ymu_A 494 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA-SDD---KTVKLWNR 537 (577)
T ss_dssp EET-TSCEEEEEECCSSCEEEEEECTTSSCEEEE-ETT---SEEEEECT
T ss_pred EcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEE-ECc---CEEEEEeC
Confidence 997 788878887776778889999998766543 322 46889987
No 278
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.20 E-value=2.6e-12 Score=141.59 Aligned_cols=222 Identities=18% Similarity=0.158 Sum_probs=129.0
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-cccHH-H-H-HHHHhcCeEEEEEecccCC-CCC--chhhhcccccc
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSIS-R-C-MFLRHFNGIYAIPNIRGGG-ELG--EDWHNAGRLLK 544 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~-~-~-~~l~~~G~~v~~~~~rG~~-~~g--~~~~~~~~~~~ 544 (734)
+.+.++.|+.....++.|+||++|||....... .+... + . .+..+.|++|+.+|||.+. +|. .+... ...
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~---~~~ 174 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA---EGS 174 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH---HTC
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc---cCC
Confidence 667788898654456789999999985433222 23321 1 1 1223358999999999754 111 01101 112
Q ss_pred CCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcC--------CCceeEEEEcCCcchhcccccccc
Q psy4818 545 KQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLRFNKFTI 613 (734)
Q Consensus 545 ~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~~~ 613 (734)
+...+.|+.++++|+.++ --.||+||.|+|+|+||.+++.++... +.+|+++|+.+|............
T Consensus 175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~~~~~~~~~~~ 254 (534)
T 1llf_A 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTY 254 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSCCCCCTTSHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCcccCCCcChHH
Confidence 334588999999999875 236999999999999999988877653 568999999998432111110000
Q ss_pred Cc----ccccccCCCCCHHHHHHHHhCCccCCCCC----CCCCccC-CcEEEEecCCCCCCCChHHHHHHHHHHhhhCCC
Q psy4818 614 AY----YSESEFGSPNNKTHFHNLLSYSPLHNIKV----PPNNTQY-PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 684 (734)
Q Consensus 614 ~~----~~~~~~g~~~~~~~~~~~~~~sp~~~~~~----p~~~~~~-P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~ 684 (734)
.. ......|.+...+..+-|++.++..-+.. +. ...+ +..+......|..+.+.+..++.++.+..
T Consensus 255 ~~~~~~~~~~~~gc~~~~~~l~cLr~~~~~~l~~a~~~~~~-~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~g~~~---- 329 (534)
T 1llf_A 255 GNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATNNTPG-FLAYSSLRLSYLPRPDGKNITDDMYKLVRDGKYA---- 329 (534)
T ss_dssp HHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHHHTSCC-TTSTTTTSCSSCCCCCSSSSCSCHHHHHHTTCSC----
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHHcCCHHHHHHHHHhccc-ccccccccccceeecCCccccCCHHHHHHcCCCC----
Confidence 00 01122344322233344444433211100 00 0000 00122344557778888887776554433
Q ss_pred CCCCCcEEEEEeCCCCCCCC
Q psy4818 685 PYQKNPLLLRVEQDAGHGQG 704 (734)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~ 704 (734)
++|+.+-...++||.+.
T Consensus 330 ---~vp~l~G~~~~Eg~~f~ 346 (534)
T 1llf_A 330 ---SVPVIIGDQNDEGTIFG 346 (534)
T ss_dssp ---CCCEEEEEETBTTHHHH
T ss_pred ---CCCEEEEEecCchhhhh
Confidence 78999999999999764
No 279
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.19 E-value=1.4e-08 Score=106.50 Aligned_cols=240 Identities=9% Similarity=0.058 Sum_probs=146.3
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++||-... ...|.+||+.+++.... ..........+|+|||+.|+....+.
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~-----Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~---------- 128 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQ-----DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN---------- 128 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS----------
T ss_pred CCeEEEEEECCCCCEEEEEeC-----CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC----------
Confidence 345788999999999885543 24799999988875332 12222346899999999887665332
Q ss_pred cccCCcEEEEEECCCCCCC----CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDK----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~----~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.+.++++...... ....+.. +...+..+.|+||++.|+.... ...|.+||+.++. .
T Consensus 129 ------~i~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t~s~----D~~v~lwd~~~~~--------~ 188 (354)
T 2pbi_B 129 ------KCSVYPLTFDKNENMAAKKKSVAM--HTNYLSACSFTNSDMQILTASG----DGTCALWDVESGQ--------L 188 (354)
T ss_dssp ------EEEEEECCCCTTCCSGGGCEEEEE--CSSCEEEEEECSSSSEEEEEET----TSEEEEEETTTCC--------E
T ss_pred ------CEEEEEEeccccccccccceeeec--cCCcEEEEEEeCCCCEEEEEeC----CCcEEEEeCCCCe--------E
Confidence 5666666543211 1112221 2335678999999999874332 2689999998731 1
Q ss_pred ceeeeccccceEEE-EEe--cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 296 LKTVIPGMDHHHEI-IAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
...+..+....... +++ +|+.|+..+. +..|..||+.++. ....+... ...+..+.+..++.++++...
T Consensus 189 ~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~----Dg~v~~wd~~~~~---~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGC----DKKAMVWDMRSGQ---CVQAFETH-ESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EEEEECCSSCEEEEEECCCSSCCEEEEEET----TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECTTSSEEEEEET
T ss_pred EEEEcCCCCCeEEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCc---EEEEecCC-CCCeEEEEEeCCCCEEEEEeC
Confidence 22222222222222 555 4555554433 3469999998765 23333332 334555655544666667666
Q ss_pred CCceeEEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ ..+.+||+.+++.+..+... ...+..+.+++++..++..... ..+.+||+
T Consensus 261 D--~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d----~~i~vwd~ 313 (354)
T 2pbi_B 261 D--ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND----YTINVWDV 313 (354)
T ss_dssp T--SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT----SCEEEEET
T ss_pred C--CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC----CcEEEEEC
Confidence 6 47899999777665555433 2345677888888766554432 46899998
No 280
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.19 E-value=1.4e-08 Score=108.54 Aligned_cols=260 Identities=11% Similarity=0.084 Sum_probs=157.6
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISW 195 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~w 195 (734)
+++.+..++....++... +...+..++|||||++|+..... ..|++||+.+++.+.... .......+.|
T Consensus 115 v~lw~~~~~~~~~~~~~~-----~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 184 (401)
T 4aez_A 115 VYVWNADSGSVSALAETD-----ESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMAGHQARVGCLSW 184 (401)
T ss_dssp EEEEETTTCCEEEEEECC-----TTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEeeCCCCcEeEeeecC-----CCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEecCCCCceEEEEE
Confidence 444444445544444432 22347899999999999876642 369999999987543222 2223356778
Q ss_pred EcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCc
Q psy4818 196 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGS 275 (734)
Q Consensus 196 SpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 275 (734)
+++.|+....+ ..|++|++..... .+..+. .+...+..+.|+|||++|+.... ..
T Consensus 185 --~~~~l~~~~~d----------------g~i~i~d~~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~----d~ 239 (401)
T 4aez_A 185 --NRHVLSSGSRS----------------GAIHHHDVRIANH-QIGTLQ--GHSSEVCGLAWRSDGLQLASGGN----DN 239 (401)
T ss_dssp --ETTEEEEEETT----------------SEEEEEETTSSSC-EEEEEE--CCSSCEEEEEECTTSSEEEEEET----TS
T ss_pred --CCCEEEEEcCC----------------CCEEEEecccCcc-eeeEEc--CCCCCeeEEEEcCCCCEEEEEeC----CC
Confidence 55666655432 2789999875432 122232 23445678999999999886432 25
Q ss_pred eEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCce
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT 354 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 354 (734)
.|++||+.++ .....+......... .|+|+++.+++.+.. ..+..|..+|+.++. ....+... ..
T Consensus 240 ~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~---~~~~~~~~--~~ 305 (401)
T 4aez_A 240 VVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGA---RVNTVDAG--SQ 305 (401)
T ss_dssp CEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCC---EEEEEECS--SC
T ss_pred eEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCC---EEEEEeCC--Cc
Confidence 7999999872 122222222222333 399998888776541 124579999998765 23333332 33
Q ss_pred eEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeee--eCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 355 LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS--FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~--l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+.+..++..++.........|++|++.+++.... +....+.+..+.+++++..++.. +. -..+..||+
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-~~---dg~i~iw~~ 378 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA-AS---DENLKFWRV 378 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE-CT---TSEEEEEEC
T ss_pred EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE-eC---CCcEEEEEC
Confidence 5556555445555554322235799999877665433 33445667778888988755543 32 257999998
No 281
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=2.1e-08 Score=105.40 Aligned_cols=285 Identities=13% Similarity=0.097 Sum_probs=141.0
Q ss_pred CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC-CCceEEEEEEECCCCCccccc-c--cc
Q psy4818 112 QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-GSDWNTLHIKDVDTGKDYPEV-L--KN 187 (734)
Q Consensus 112 ~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~-g~~~~~l~v~dl~~g~~~~~~-~--~~ 187 (734)
...-.+|..+..++..+.+... .. .....++|||||++|+++...+ +.....+|.++.++|+..... . ..
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~-~~-----~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA-EV-----ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE-EC-----SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCCEEEEEEeCCCCCEEEeecc-cC-----CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 3344566666666665554432 11 1134679999999988776532 222344555565557542221 1 11
Q ss_pred cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-CCe-eEEec-CCC-------CeeEEEEEE
Q psy4818 188 VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDI-PVVEF-PNG-------RSLGLHSEV 257 (734)
Q Consensus 188 ~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~-~v~~~-~~~-------~~~~~~~~~ 257 (734)
.....+++ ||+.|+..... ...|.++++.+... ..+ ..... ... ......+.|
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~---------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYS---------------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETT---------------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred CCcEEEEE--CCCEEEEEECC---------------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 11123444 99887765531 23677777764321 111 11111 000 112356899
Q ss_pred ecCCcEEEEEEecCCCCceEEEEeCCCCCCC----c-ccCC-C-CceeeeccccceEEEEEecCCeEEEEeCCCCCCceE
Q psy4818 258 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG----K-ISGK-F-PLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKV 330 (734)
Q Consensus 258 SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~----~-l~~~-~-~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l 330 (734)
||||++|++... ....|++|+++.. .. . +... . ....+..+.......|+|||+.+|+.... ...|
T Consensus 163 spdg~~l~~~~~---~~~~v~v~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v 235 (361)
T 3scy_A 163 TPDGKYLLADDL---GTDQIHKFNINPN-ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI---GGTV 235 (361)
T ss_dssp CTTSSEEEEEET---TTTEEEEEEECTT-CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT---TCEE
T ss_pred CCCCCEEEEEeC---CCCEEEEEEEcCC-CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC---CCeE
Confidence 999999887542 2257788877651 11 1 1100 0 00011111111222499999988876643 2458
Q ss_pred EEEecCCCCCCCceEeecCC-CCceeEEEEEeeCC-EEEEEEEeCCceeEEEEEC--CCCce--eeeeCCCCceEEeecc
Q psy4818 331 VTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANN-KLIVHYIQNVRSVMDLHDL--NTGKR--LHSFPLDLGQITHISG 404 (734)
Q Consensus 331 ~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl--~~g~~--~~~l~~~~g~v~~~~~ 404 (734)
.+++++++.......+.... .......+.+..++ .+++.. .++...+.+|++ .+|+. +..+.. ...+..+.+
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~-~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN-RLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-CSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-CCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 88887755311111121111 11222344454434 455443 331345666666 35653 223332 223446778
Q ss_pred CcccceEEEEEecCCCCceEEEEeC
Q psy4818 405 RRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 405 ~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||++.+++.... ..--.+|.+|.
T Consensus 314 spdg~~l~~~~~~-~~~v~v~~~d~ 337 (361)
T 3scy_A 314 TPNGKYLLVACRD-TNVIQIFERDQ 337 (361)
T ss_dssp CTTSCEEEEEETT-TTEEEEEEECT
T ss_pred CCCCCEEEEEECC-CCCEEEEEEEC
Confidence 8999877766532 22234555776
No 282
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.18 E-value=2.2e-09 Score=116.31 Aligned_cols=196 Identities=8% Similarity=0.013 Sum_probs=109.0
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCC----eeEEEEEEecCCcEEE
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR----SLGLHSEVTDCGRYLL 265 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~----~~~~~~~~SpDG~~l~ 265 (734)
+..++|||||+.|+-...+. .|.+|+..+ ++.....+. .-+.+++|||||++|+
T Consensus 88 V~~vawSPdG~~LAs~s~dg----------------~V~iwd~~~------~l~~l~~~~~~~~~sv~svafSPDG~~LA 145 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNG----------------NVSVFKDNK------MLTNLDSKGNLSSRTYHCFEWNPIESSIV 145 (588)
T ss_dssp EEEEEECSSSSCEEEEETTS----------------CEEEEETTE------EEEECCCSSCSTTTCEEEEEECSSSSCEE
T ss_pred EEEEEECCCCCEEEEEeCCC----------------cEEEEeCCc------eeeeccCCCccccccEEEEEEcCCCCEEE
Confidence 46789999999999777543 467777432 222211111 1256899999999999
Q ss_pred EEEecCCCCceEEEEeCCCCCCCcccCCCCceeee---c-cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCC
Q psy4818 266 VSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---P-GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCE 340 (734)
Q Consensus 266 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~---~-~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 340 (734)
.... ...|.+||+.++.....+ -.....+. . +....... |+||| ++..+. +..++.|+++++..
T Consensus 146 sgs~----DGtVkIWd~~~~~l~~~~-~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~----D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 146 VGNE----DGELQFFSIRKNSENTPE-FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS----NNSVFSMTVSASSH 214 (588)
T ss_dssp EEET----TSEEEEEECCCCTTTCCC-CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----TCCEEEECCCSSSS
T ss_pred EEcC----CCEEEEEECCCCcccccc-ceeeeeeecccccccccEEEEEEcCCc--EEEEeC----CCeEEEEECCCCcc
Confidence 6543 368999999883210000 00012221 1 11223333 99998 444333 24599999987652
Q ss_pred C-CceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeecc--CcccceEEEEEec
Q psy4818 341 K-NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG--RRKYNEVFYGFTS 417 (734)
Q Consensus 341 ~-~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~--~~d~~~l~~~~ss 417 (734)
. .+..+.... ...+..+.+. ++.++ +.. + ..+++||+.+++...........+..+.+ ++++..+++++.+
T Consensus 215 ~~~~~tL~~~h-~~~V~svaFs-g~~LA-Sa~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 215 QPVSRMIQNAS-RRKITDLKIV-DYKVV-LTC-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp CCCEEEEECCC-SSCCCCEEEE-TTEEE-EEC-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC
T ss_pred ccceeeecccc-cCcEEEEEEE-CCEEE-EEe-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC
Confidence 1 122332222 2344455555 44444 443 3 58999999766542222234555667777 8887666655433
Q ss_pred CCCCceEEEE
Q psy4818 418 FLQPGTIYHC 427 (734)
Q Consensus 418 ~~~P~~~~~~ 427 (734)
.+ .+|..
T Consensus 289 G~---klw~~ 295 (588)
T 2j04_A 289 SY---KVLLE 295 (588)
T ss_dssp EE---EEEES
T ss_pred CC---EEEee
Confidence 22 45554
No 283
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.18 E-value=7.3e-09 Score=107.99 Aligned_cols=288 Identities=11% Similarity=-0.006 Sum_probs=146.0
Q ss_pred eCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy4818 99 QENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 178 (734)
Q Consensus 99 ~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g 178 (734)
.++.+|..-... ..|++.+..++.....+.... ......++|||||++++++.... ..|+++|++++
T Consensus 9 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPD-----KFGPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDTC 75 (349)
T ss_dssp TTCEEEEEEETT----TEEEEEETTTTEEEEEEECSS-----CCSSCEEEECTTSSEEEEEETTT----TEEEEEETTTT
T ss_pred CCCEEEEEeCCC----CeEEEEECCCCcEEEEEecCC-----CCCCceeEECCCCCEEEEEeCCC----CcEEEEeCCCC
Confidence 345555544333 347777765554433343221 01245789999999887765433 36999999998
Q ss_pred Cccccc-cc------ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-CCeeEEecCCCCe
Q psy4818 179 KDYPEV-LK------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRS 250 (734)
Q Consensus 179 ~~~~~~-~~------~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~-~~~~v~~~~~~~~ 250 (734)
+.+... .. ......++|||||+.|++...+..... .........|+++++.++.. +.+..+..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~----~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--- 148 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN----DHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--- 148 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECS----SCEEECCCEEEEEEGGGGGGBCCSEEEECCS---
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccc----cccccCCCeEEEEECCCccccceeeeccCCC---
Confidence 754322 11 111367899999999998875410000 00001124799999876432 1222333322
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee----------ee--ccccc----eEE-EEEec
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT----------VI--PGMDH----HHE-IIANN 313 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~----------l~--~~~~~----~~~-~~s~d 313 (734)
....++|||||+ +++. . .+|+++|+.++..........+.. +. ..... ... .+++|
T Consensus 149 ~~~~~~~s~dg~-l~~~--~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 149 QVYLMRAADDGS-LYVA--G----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp SCCCEEECTTSC-EEEE--S----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred cccceeECCCCc-EEEc--c----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 234678999999 6542 1 349999998742110000000000 00 00000 000 02222
Q ss_pred CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-e-eCCEEEEEEEeCCceeEEEEECCCCceeee
Q psy4818 314 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-V-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 391 (734)
Q Consensus 314 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~ 391 (734)
+..... .......++.+++.++. +..+...........+.+ + +++.+++. ...|++||+.+++.++.
T Consensus 222 ~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 222 DKQDPA---TADLLYGYLSVDLKTGK---THTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp -----C---CCEEEEEEEEEETTTCC---EEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEE
T ss_pred CcCCcc---ccccceeEEEEeccCCc---EEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEE
Confidence 211100 00012224446665544 222111111222333434 3 44455544 35899999988887666
Q ss_pred eCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 392 FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 392 l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+. .+..+.++++++.+++. + . -..++++|+
T Consensus 291 ~~~~~-~~~~~~~s~dg~~l~~~-~-~--~~~v~v~d~ 323 (349)
T 1jmx_B 291 ANLDH-TYYCVAFDKKGDKLYLG-G-T--FNDLAVFNP 323 (349)
T ss_dssp EECSS-CCCEEEECSSSSCEEEE-S-B--SSEEEEEET
T ss_pred EcCCC-CccceEECCCCCEEEEe-c-C--CCeEEEEec
Confidence 65442 23467788898888773 2 2 268999999
No 284
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.17 E-value=8.9e-09 Score=110.34 Aligned_cols=236 Identities=12% Similarity=0.144 Sum_probs=146.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++|||||++|+..... ..|++||. +++.+. ..........+.|+||++.|+....+.
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~d-----g~i~i~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------- 171 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVEN-----GELRLWNK-TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN----------- 171 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETT-----SCEEEEET-TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC-----------
T ss_pred CceEEEEEcCCCCEEEEEeCC-----CeEEEEeC-CCCeeeeccCCCccEEEEEECCCCCEEEEEecCC-----------
Confidence 358899999999999976542 25899994 444322 222222346899999999888766432
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCC-------------eeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGR-------------SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~-------------~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
.|+++++.++.. +..+...... .....+.|+|++..++ . .....|++||+.++.
T Consensus 172 -----~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~g~i~~~d~~~~~- 238 (425)
T 1r5m_A 172 -----VTILWNVISGTV--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVI-P----GPKGAIFVYQITEKT- 238 (425)
T ss_dssp -----CEEEEETTTTEE--EEEECCC---------------CCCBSCCEEEETTEEEE-E----CGGGCEEEEETTCSS-
T ss_pred -----eEEEEECCCCcE--EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEE-E----cCCCeEEEEEcCCCc-
Confidence 577888765431 1122211110 0145678999987443 2 223689999998731
Q ss_pred CcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEE
Q psy4818 288 GKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKL 366 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 366 (734)
....+.......... |+|+++.|+..+. +..|..+|+.++.. ...+ ... ...+..+.+..++ +
T Consensus 239 -------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~--~~~~-~~~-~~~i~~~~~~~~~-~ 302 (425)
T 1r5m_A 239 -------PTGKLIGHHGPISVLEFNDTNKLLLSASD----DGTLRIWHGGNGNS--QNCF-YGH-SQSIVSASWVGDD-K 302 (425)
T ss_dssp -------CSEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEECSSSBSC--SEEE-CCC-SSCEEEEEEETTT-E
T ss_pred -------eeeeeccCCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCCcc--ceEe-cCC-CccEEEEEECCCC-E
Confidence 222222222233333 9999987776553 24589999877542 2333 322 2344555555545 5
Q ss_pred EEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 367 IVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 367 ~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+++...+ ..|++||+.+++.+..+......+..+.++++++.++..... ..+..||+
T Consensus 303 l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~ 359 (425)
T 1r5m_A 303 VISCSMD--GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDL 359 (425)
T ss_dssp EEEEETT--SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEEC
T ss_pred EEEEeCC--CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEEC
Confidence 5555555 479999998888777776656667788889988766654332 46889998
No 285
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.17 E-value=4.1e-12 Score=138.99 Aligned_cols=221 Identities=20% Similarity=0.182 Sum_probs=127.6
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCC---CCcCCccccHHHHHHHHhcC-eEEEEEecccCC-CCCchhhhcc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFN-GIYAIPNIRGGG-ELGEDWHNAG 540 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~~l~~~G-~~v~~~~~rG~~-~~g~~~~~~~ 540 (734)
+.|. +.+.++.|+. ..++.|+||++|||. ++.....+.. ..|+++| ++|+.+|||.+. ||+..-....
T Consensus 81 ~edc--l~l~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~ 153 (498)
T 2ogt_A 81 SEDG--LYLNIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDG---TAFAKHGDVVVVTINYRMNVFGFLHLGDSFG 153 (498)
T ss_dssp BSCC--CEEEEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCC---HHHHHHHTCEEEEECCCCHHHHCCCCTTTTC
T ss_pred CCCC--cEEEEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCH---HHHHhCCCEEEEeCCCcCchhhccCchhhcc
Confidence 4455 4566677863 356789999999986 3333322332 3344445 999999999421 2332111100
Q ss_pred --ccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcchh-cccccc-
Q psy4818 541 --RLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDM-LRFNKF- 611 (734)
Q Consensus 541 --~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~-~~~~~~- 611 (734)
....+...+.|+.++++|+.++- -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|..+. ......
T Consensus 154 ~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~ 233 (498)
T 2ogt_A 154 EAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPETA 233 (498)
T ss_dssp GGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTTTCBCHHHH
T ss_pred ccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCccccccCHHHH
Confidence 11122345789999999998762 26999999999999999999888752 4689999999997652 111000
Q ss_pred -ccCcccccccCCCCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCc
Q psy4818 612 -TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 690 (734)
Q Consensus 612 -~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~ 690 (734)
..........|-+. +..+-|++.++.+-+.... ... | .+.....-|..+-+.+..++.++-+.. ++|
T Consensus 234 ~~~~~~~~~~~gc~~--~~~~~Lr~~~~~~l~~~~~-~~~-~-~~~f~PvvDg~~lp~~p~~~~~~g~~~-------~vp 301 (498)
T 2ogt_A 234 MAMTERILDKAGIRP--GDRERLLSIPAEELLRAAL-SLG-P-GVMYGPVVDGRVLRRHPIEALRYGAAS-------GIP 301 (498)
T ss_dssp HHHHHHHHHHHTCCT--TCHHHHHHSCHHHHHHHHH-TTT-T-SCCCCCBCCSSSCCSCHHHHHHTTTTT-------TCC
T ss_pred HHHHHHHHHHhCCCH--HHHHHHHcCCHHHHHHHHh-hcc-C-CCceeeeeCCcccccCHHHHHhcCCCC-------CCC
Confidence 00001112234332 2233344443322111100 000 1 122334456667777776555433323 789
Q ss_pred EEEEEeCCCCCCCCC
Q psy4818 691 LLLRVEQDAGHGQGT 705 (734)
Q Consensus 691 ~~~~~~~~~gH~~~~ 705 (734)
+.+-...+||+.+..
T Consensus 302 ~liG~~~~Eg~~f~~ 316 (498)
T 2ogt_A 302 ILIGVTKDEYNLFTL 316 (498)
T ss_dssp EEEEEETTHHHHTTT
T ss_pred EEEEEeccchhhhhc
Confidence 999999999987754
No 286
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.17 E-value=6.7e-09 Score=110.19 Aligned_cols=242 Identities=10% Similarity=0.049 Sum_probs=142.7
Q ss_pred EEeeEEeCCCC-cEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEc-CCcEEEEEEEecCCCCCCCC
Q psy4818 143 ALKLYAFSDNG-KHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTH-DHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 143 ~~~~~~~SPDG-~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~ 217 (734)
.+..++||||| ++||.... . ..|++||+.+++..... .....+..+.|+| |++.|+....+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------- 140 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSK-G----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--------- 140 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEB-T----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---------
T ss_pred CEEEEEECCCCCCEEEEEcC-C----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---------
Confidence 37789999999 77776554 3 35999999988754321 1222346899999 55655555432
Q ss_pred cccccCCcEEEEEECCCCCCCCeeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 218 ETTAHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
..|.+|++.+. ....+.. ......+..+.|+|||++|+.... ...|++||+.+ ...
T Consensus 141 -------~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~---------~~~ 197 (383)
T 3ei3_B 141 -------GATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS----TGRLLLLGLDG---------HEI 197 (383)
T ss_dssp -------TEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEET----TSEEEEEETTS---------CEE
T ss_pred -------CEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECC----CCCEEEEECCC---------CEE
Confidence 26888998753 2222222 222245678999999999875432 26899999954 122
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCC-CCceEeecCCCCceeEEEEEee-CCEEEEEEEeC
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQN 373 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 373 (734)
..+.......... |+|+++.+++.+.. +..|..+|+.+... ......+.+ ...+..+.+.. ++.++++...+
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEEESS
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEEcCC
Confidence 3333333333343 99999854444433 34699999976321 113333333 23455565554 46666666655
Q ss_pred CceeEEEEECCCCceeeeeCCC-------CceEEeeccCcccceEEEEEe-----cCCCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLD-------LGQITHISGRRKYNEVFYGFT-----SFLQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~-------~g~v~~~~~~~d~~~l~~~~s-----s~~~P~~~~~~d~ 429 (734)
..|++||+.+++.+..+... ...+ ...+++++..+.+.++ +...-..+++||+
T Consensus 273 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 273 --NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI-KATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDA 337 (383)
T ss_dssp --SEEEEEETTBTTSCSEEEECCBCCCTTSCCC-CCEECSSSSEEEEECBCCTTTCTTCCCCEEEEET
T ss_pred --CcEEEEECCCCccccccccccccccccccce-EEeccCCCCceEEEecCCcccccCCCCeEEEEec
Confidence 47999999877754444311 1111 1234444544444433 2223467889998
No 287
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.16 E-value=8.4e-10 Score=112.51 Aligned_cols=118 Identities=12% Similarity=0.058 Sum_probs=76.4
Q ss_pred CCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCC
Q psy4818 467 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 546 (734)
Q Consensus 467 ~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~ 546 (734)
.+|.++..... +..|.||++||.++.... |.. ....|+ .||.|+++|+||.|... ..........
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~~~~--w~~-~~~~l~-~~~~vi~~Dl~G~G~s~---~~~~~~~~~~ 76 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQTHVM--WHK-IAPLLA-NNFTVVATDLRGYGDSS---RPASVPHHIN 76 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCCGGG--GTT-THHHHT-TTSEEEEECCTTSTTSC---CCCCCGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCCHHH--HHH-HHHHHh-CCCEEEEEcCCCCCCCC---CCCCCccccc
Confidence 36777765431 345778999998766544 333 235666 49999999999955432 1111111112
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 547 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 547 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
...+++...+..+++. ...+++.++|||+||+++..++.++|++++++|+..+
T Consensus 77 ~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 77 YSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 3444544444444443 1235799999999999999999999999999887653
No 288
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.16 E-value=1.8e-09 Score=122.21 Aligned_cols=240 Identities=11% Similarity=0.043 Sum_probs=151.0
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC----Cccccc-ccccc-cCeeEEEc--CCcEEEEEEEecCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG----KDYPEV-LKNVK-FPSISWTH--DHKGFFYNQYCDINGT 213 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g----~~~~~~-~~~~~-~~~~~wSp--Dg~~l~y~~~~~~~~~ 213 (734)
..+..++|||||++||+..+ ..|.+||++++ +.+... ..... +..++|+| ||+.|+....+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~------~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg---- 88 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG------KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG---- 88 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET------TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTS----
T ss_pred CceeEEEECCCCCEEEEecC------CeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCC----
Confidence 34678999999999999872 26999999988 543222 22223 46899999 999888766432
Q ss_pred CCCCcccccCCcEEEEEECCCC------CCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTE------QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~------~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
.|.+|++.++ ... .+.........+..+.|+|||++|+...........|++||...
T Consensus 89 ------------~v~vw~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~--- 151 (615)
T 1pgu_A 89 ------------KVIVWGWTFDKESNSVEVN--VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--- 151 (615)
T ss_dssp ------------EEEEEEEEEEGGGTEEEEE--EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC---
T ss_pred ------------EEEEEeCCCCccccccccc--ccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC---
Confidence 6777777543 111 22222222335678999999999987765433336788888332
Q ss_pred CcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc---eeEEEEEeeC
Q psy4818 288 GKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR---TLDVVAAVAN 363 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~ 363 (734)
....+.......... |+|+++.+++.... +..|..+|+.+.. ....+... .. .+..+.+..+
T Consensus 152 -------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~~---~~~~~~~~-~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 152 -------SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFK---FSASDRTH-HKQGSFVRDVEFSPD 217 (615)
T ss_dssp -------EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBE---EEEEECSS-SCTTCCEEEEEECST
T ss_pred -------cceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCcc---eeeeeccc-CCCCceEEEEEECCC
Confidence 122222222333333 89998854444433 3568999987654 22233322 23 4556666655
Q ss_pred -CEEEEEEEeCCceeEEEEECCCCceeeee-C---CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 364 -NKLIVHYIQNVRSVMDLHDLNTGKRLHSF-P---LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 -~~l~~~~~~~~~~~l~~~dl~~g~~~~~l-~---~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++++...+ ..|++||+.+++.+..+ . ...+.+..+.++ ++..++. .+.. ..+..+|+
T Consensus 218 ~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~-~~~d---~~i~~wd~ 281 (615)
T 1pgu_A 218 SGEFVITVGSD--RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFAT-VGAD---ATIRVWDV 281 (615)
T ss_dssp TCCEEEEEETT--CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEE-EETT---SEEEEEET
T ss_pred CCCEEEEEeCC--CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEE-EcCC---CcEEEEEC
Confidence 5666666555 47999999889887777 3 445667788887 6655544 3332 46899998
No 289
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.16 E-value=3.3e-09 Score=111.98 Aligned_cols=245 Identities=11% Similarity=-0.006 Sum_probs=144.9
Q ss_pred EEeCCCCcEEEEEEeCC------CCceEEEEEEECCCCCcc-c-c----cc----cccccCeeEEEcCCcEEEEEEEecC
Q psy4818 147 YAFSDNGKHFAYCLSKS------GSDWNTLHIKDVDTGKDY-P-E----VL----KNVKFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~------g~~~~~l~v~dl~~g~~~-~-~----~~----~~~~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
.+++|+++.++...+.+ |+....+++|++.++... . . .. .......++|||||+.|+..+..
T Consensus 77 ~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~-- 154 (365)
T 4h5i_A 77 TAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSK-- 154 (365)
T ss_dssp CEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESC--
T ss_pred EEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECC--
Confidence 35677888887765432 333456777776654311 0 0 00 00011358999999998876632
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
....|++|++.+... +..++. ...+.+++|||||++|+... + ..+.+++..++.
T Consensus 155 ------------~d~~i~iwd~~~~~~--~~~~~~---~~~V~~v~fspdg~~l~s~s----~-~~~~~~~~~~~~---- 208 (365)
T 4h5i_A 155 ------------VPAIMRIIDPSDLTE--KFEIET---RGEVKDLHFSTDGKVVAYIT----G-SSLEVISTVTGS---- 208 (365)
T ss_dssp ------------SSCEEEEEETTTTEE--EEEEEC---SSCCCEEEECTTSSEEEEEC----S-SCEEEEETTTCC----
T ss_pred ------------CCCEEEEeECCCCcE--EEEeCC---CCceEEEEEccCCceEEecc----c-eeEEEEEeccCc----
Confidence 133789999887542 222222 22356799999999998643 1 356677766621
Q ss_pred cCCCCceeee-cccc-ceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCc-eEeecCCCCceeEEEEEeeCCEE
Q psy4818 291 SGKFPLKTVI-PGMD-HHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW-KTLIPEDENRTLDVVAAVANNKL 366 (734)
Q Consensus 291 ~~~~~~~~l~-~~~~-~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~l 366 (734)
...... .... ..... |+|||+.++..+........+..+++........ ...+... ...+..+.+..++.+
T Consensus 209 ----~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 209 ----CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGEL 283 (365)
T ss_dssp ----EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCE
T ss_pred ----ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCc
Confidence 111111 1111 12223 9999998887766544445677787765431000 0112222 234455555555777
Q ss_pred EEEEEeCCceeEEEEECCCCceeeee-CCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCC
Q psy4818 367 IVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 430 (734)
Q Consensus 367 ~~~~~~~~~~~l~~~dl~~g~~~~~l-~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~ 430 (734)
+++...+ ..|++||+.+++.++.+ ....+.|.+++++||++.| ++.+... .+.++|++
T Consensus 284 lasgs~D--~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~D~---tvrvw~ip 342 (365)
T 4h5i_A 284 AVLASND--NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV-ASVSAAN---TIHIIKLP 342 (365)
T ss_dssp EEEEETT--SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE-EEEETTS---EEEEEECC
T ss_pred eEEEcCC--CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE-EEEeCCC---eEEEEEcC
Confidence 7777766 46999999999887765 4557778899999998654 4555443 68888883
No 290
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.16 E-value=1.1e-09 Score=113.87 Aligned_cols=256 Identities=11% Similarity=0.057 Sum_probs=132.8
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 175 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl 175 (734)
..++|.++|...... ..-.+|..+..++..+.+..... .+ .+..++|||||++|+++...+ ..|++||+
T Consensus 45 ~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~s~dg~~l~~~~~~~----~~i~~~d~ 113 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAESAL---PG--SLTHISTDHQGQFVFVGSYNA----GNVSVTRL 113 (343)
T ss_dssp ECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEC---SS--CCSEEEECTTSSEEEEEETTT----TEEEEEEE
T ss_pred ECCCCCEEEEeecCC--CeEEEEEecCCCCceeecccccc---CC--CCcEEEEcCCCCEEEEEecCC----CeEEEEEC
Confidence 346788777765442 33445655533444443322211 11 356789999999988776533 35888888
Q ss_pred CCCC---cccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC-CCCCCee--EEecCCCC
Q psy4818 176 DTGK---DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-EQDKDIP--VVEFPNGR 249 (734)
Q Consensus 176 ~~g~---~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t-~~~~~~~--v~~~~~~~ 249 (734)
..|. .+...........++|+|||+.|+..... ...|+++++.+ +...... .......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~- 177 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK---------------QDRICLFTVSDDGHLVAQDPAEVTTVEG- 177 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG---------------GTEEEEEEECTTSCEEEEEEEEEECSTT-
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCC---------------CCEEEEEEecCCCceeeecccccccCCC-
Confidence 4332 22222222234678999999988766521 22688888875 3211111 1222211
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc---ccceE-EEEEecCCeEEEEeCCCC
Q psy4818 250 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG---MDHHH-EIIANNGPELIVKTTKNA 325 (734)
Q Consensus 250 ~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~---~~~~~-~~~s~dg~~l~~~s~~~~ 325 (734)
.....+.|+|||++|++... ....|.+|++.. ....+........+..+ ..... ..|+|||+.||+....
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~---~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-- 251 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNE---LNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-- 251 (343)
T ss_dssp CCEEEEEECTTSSEEEEEET---TTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT--
T ss_pred CCcceEEECCCCCEEEEEeC---CCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC--
Confidence 23456899999999887642 226789999854 11111000000000011 01111 2399999988765532
Q ss_pred CCceEEEEecC--CCCCCCceEeecCCCCceeEEEEEeeCC-EEEEEEEeCCceeEEEEECCCCce
Q psy4818 326 PKGKVVTINLN--NPCEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 326 ~~~~l~~~d~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
...|.+++++ ++... ....++.. .. +..+.+..++ .+++....++.-.++.+|..+|+.
T Consensus 252 -~~~i~v~d~~~~~~~~~-~~~~~~~~-~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 252 -ASLITVFSVSEDGSVLS-KEGFQPTE-TQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp -TTEEEEEEECTTSCCEE-EEEEEECS-SS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred -CCEEEEEEEcCCCCceE-EeeeecCC-Cc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 3468888876 33211 11122222 22 3344444334 455544344433444457766753
No 291
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.16 E-value=3.8e-09 Score=111.28 Aligned_cols=243 Identities=11% Similarity=-0.001 Sum_probs=146.5
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC--cccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~--~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.+..++|||||++||.... ...|++||+.+++ .+.. ......+..+.|+|||+.|+....+.
T Consensus 10 ~i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg---------- 74 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR---------- 74 (372)
T ss_dssp CCCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS----------
T ss_pred CeEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC----------
Confidence 3678999999999987643 2479999999885 3221 12222346899999999888766432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|++|++.+... ............+..+.|+|||++|+..... ..|++||+.++.... ....+
T Consensus 75 ------~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~d~~~~~~~~-----~~~~~ 137 (372)
T 1k8k_C 75 ------NAYVWTLKGRTW--KPTLVILRINRAARCVRWAPNEKKFAVGSGS----RVISICYFEQENDWW-----VCKHI 137 (372)
T ss_dssp ------CEEEEEEETTEE--EEEEECCCCSSCEEEEEECTTSSEEEEEETT----SSEEEEEEETTTTEE-----EEEEE
T ss_pred ------eEEEEECCCCee--eeeEEeecCCCceeEEEECCCCCEEEEEeCC----CEEEEEEecCCCcce-----eeeee
Confidence 577788765431 1122222233356789999999998865432 568888887621100 01111
Q ss_pred ecc-ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC---------------CCCceEeecCCCCceeEEEEEee
Q psy4818 300 IPG-MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC---------------EKNWKTLIPEDENRTLDVVAAVA 362 (734)
Q Consensus 300 ~~~-~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---------------~~~~~~l~~~~~~~~~~~~~~~~ 362 (734)
... ....... |+|+++.|+..+.. ..|..+|+.... .......+... ...+..+.+..
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~ 212 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSA 212 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECS
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCC----CCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECC
Confidence 121 1222333 89998877765542 458888864210 00122222222 23455555554
Q ss_pred CCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 363 NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 363 ~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.++++...+ ..|++||+.+++.+..+......+..+.+++++..++ .. + -..++.|++
T Consensus 213 ~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~---d~~i~i~~~ 272 (372)
T 1k8k_C 213 NGSRVAWVSHD--STVCLADADKKMAVATLASETLPLLAVTFITESSLVA-AG-H---DCFPVLFTY 272 (372)
T ss_dssp SSSEEEEEETT--TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEE-EE-T---TSSCEEEEE
T ss_pred CCCEEEEEeCC--CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEE-EE-e---CCeEEEEEc
Confidence 45566666555 4799999988888777776666677888888875443 32 2 235677777
No 292
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.15 E-value=2.3e-11 Score=134.46 Aligned_cols=133 Identities=20% Similarity=0.148 Sum_probs=93.8
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-cccHHHHHHHHhcCeEEEEEecc-cCCCCCchhhhccccc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIR-GGGELGEDWHNAGRLL 543 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~r-G~~~~g~~~~~~~~~~ 543 (734)
+.|. +.+.++.|+....+++.|+||++|||....... .|... .++.+.|++|+.+||| |..+|+..... ..
T Consensus 95 ~edc--l~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~---~~ 167 (542)
T 2h7c_A 95 SEDC--LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDE---HS 167 (542)
T ss_dssp ESCC--CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSST---TC
T ss_pred CCCC--cEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcc---cC
Confidence 4455 456678898754457899999999985433221 24332 3444469999999999 43333322111 11
Q ss_pred cCCCchhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCcchh
Q psy4818 544 KKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALDM 605 (734)
Q Consensus 544 ~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d~ 605 (734)
.+...+.|+.++++|+.++ ...||+||.|+|+|+||++++.++.. .+.+|+++|+.+|....
T Consensus 168 ~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 168 RGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 2233478999999999775 23799999999999999999999876 36799999999997653
No 293
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.13 E-value=6e-10 Score=115.61 Aligned_cols=251 Identities=11% Similarity=-0.005 Sum_probs=141.7
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC----CC---ceE
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS----GS---DWN 168 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~----g~---~~~ 168 (734)
..++|+++|+..... ..+++.+..++.....+...... ........++|||||++|+++.... +. ...
T Consensus 41 ~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 41 VAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPE-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp ECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTT-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred EcCCCCEEEEEeCCC----CeEEEEECCCCCeEeeEEcCCcc-cccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 346777777765332 24666665555544333322100 0001234689999999998875321 00 125
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 248 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~ 248 (734)
.|+++|+++++.+.....+.....++|||||+.|++. +. .|+++++.++.. +..+.....
T Consensus 116 ~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~----------------~i~~~d~~~~~~--~~~~~~~~~ 175 (337)
T 1pby_B 116 RVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GR----------------DLHVMDPEAGTL--VEDKPIQSW 175 (337)
T ss_dssp EEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SS----------------SEEEEETTTTEE--EEEECSTTT
T ss_pred eEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CC----------------eEEEEECCCCcE--eeeeecccc
Confidence 8999999998764332222234678999999998877 21 588888876532 112222110
Q ss_pred CeeEEEEEEecCCcEEEEEEecCCC--------------------CceEEEEeCCCCCCCcccCCCCceeeeccccceEE
Q psy4818 249 RSLGLHSEVTDCGRYLLVSTSNNTQ--------------------GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE 308 (734)
Q Consensus 249 ~~~~~~~~~SpDG~~l~~~~~~~~~--------------------~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~ 308 (734)
. ....|+|||++|++....... ...|+++|+.++.. ....+.........
T Consensus 176 ~---~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~~~~ 245 (337)
T 1pby_B 176 E---AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM-------AMREVRIMDVFYFS 245 (337)
T ss_dssp T---TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE-------EEEEEEECSSCEEE
T ss_pred C---CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc-------eEeecCCCCCceee
Confidence 1 124789999988654321110 01688999987321 00111111111222
Q ss_pred -EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCC
Q psy4818 309 -IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTG 386 (734)
Q Consensus 309 -~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g 386 (734)
.|+|||+.+|+. +..|+++|+++++ ....+... .. ...+.+. +++.+++. .. ...|.+||++++
T Consensus 246 ~~~s~dg~~l~~~------~~~v~~~d~~~~~---~~~~~~~~-~~-~~~~~~s~dg~~l~~~-~~--~~~i~v~d~~~~ 311 (337)
T 1pby_B 246 TAVNPAKTRAFGA------YNVLESFDLEKNA---SIKRVPLP-HS-YYSVNVSTDGSTVWLG-GA--LGDLAAYDAETL 311 (337)
T ss_dssp EEECTTSSEEEEE------ESEEEEEETTTTE---EEEEEECS-SC-CCEEEECTTSCEEEEE-SB--SSEEEEEETTTC
T ss_pred EEECCCCCEEEEe------CCeEEEEECCCCc---CcceecCC-Cc-eeeEEECCCCCEEEEE-cC--CCcEEEEECcCC
Confidence 399999988876 2469999998764 23333322 22 2334444 43445553 32 368999999889
Q ss_pred ceeeeeCCC
Q psy4818 387 KRLHSFPLD 395 (734)
Q Consensus 387 ~~~~~l~~~ 395 (734)
+.+..+..+
T Consensus 312 ~~~~~~~~~ 320 (337)
T 1pby_B 312 EKKGQVDLP 320 (337)
T ss_dssp CEEEEEECG
T ss_pred cEEEEEEcC
Confidence 887777654
No 294
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.12 E-value=1.4e-09 Score=113.76 Aligned_cols=252 Identities=11% Similarity=0.073 Sum_probs=123.2
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC
Q psy4818 97 QRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 176 (734)
Q Consensus 97 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~ 176 (734)
.++|. +|.....++.. .+++.+..++..+.+...... ......++|||||++|+++...+| .|.+|++.
T Consensus 48 spdg~-l~~~~~~~~~~--~v~~~~~~~g~~~~~~~~~~~----~~~p~~~a~spdg~~l~~~~~~~~----~v~v~~~~ 116 (347)
T 3hfq_A 48 SAKDC-LYSVDKEDDEG--GIAAWQIDGQTAHKLNTVVAP----GTPPAYVAVDEARQLVYSANYHKG----TAEVMKIA 116 (347)
T ss_dssp CTTCE-EEEEEEETTEE--EEEEEEEETTEEEEEEEEEEE----SCCCSEEEEETTTTEEEEEETTTT----EEEEEEEC
T ss_pred ccCCe-EEEEEecCCCc--eEEEEEecCCcEEEeeeeecC----CCCCEEEEECCCCCEEEEEeCCCC----EEEEEEeC
Confidence 35676 76665543232 344443334444443321100 112457899999999887764332 58888874
Q ss_pred -CCCcccc-cc--cc---------cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC-CCCCCeeE
Q psy4818 177 -TGKDYPE-VL--KN---------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-EQDKDIPV 242 (734)
Q Consensus 177 -~g~~~~~-~~--~~---------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t-~~~~~~~v 242 (734)
+|..... .. .+ .....++|+|||+ ++.+.. ....|+++++.. +.......
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~---------------~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL---------------GSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET---------------TTTEEEEEEECTTSCEEEEEE
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC---------------CCCEEEEEEECCCCcEEEeee
Confidence 4432111 11 00 0123589999999 554432 123688888873 22111111
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc------cceEE-EEEecCC
Q psy4818 243 VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM------DHHHE-IIANNGP 315 (734)
Q Consensus 243 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~------~~~~~-~~s~dg~ 315 (734)
+...... ....++|||||++|++.... ...+++++++. ....++ ....+.... ..... .|+|||+
T Consensus 181 ~~~~~g~-~p~~~~~spdg~~l~v~~~~---~~~v~v~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 181 LTMEAGF-GPRHLVFSPDGQYAFLAGEL---SSQIASLKYDT-QTGAFT---QLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EECCTTC-CEEEEEECTTSSEEEEEETT---TTEEEEEEEET-TTTEEE---EEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred EEcCCCC-CCceEEECCCCCEEEEEeCC---CCEEEEEEecC-CCCceE---EeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 1221111 23468999999998875432 24666666653 111110 001111000 11122 3999999
Q ss_pred eEEEEeCCCCCCceEEEEecCCC-CCCCceEeecCCCCceeEEEEEeeCC-EEEEEEEeCCceeEEEEECCCCce
Q psy4818 316 ELIVKTTKNAPKGKVVTINLNNP-CEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 316 ~l~~~s~~~~~~~~l~~~d~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
+||+.... ...|.+++++.. ... ....++.. ......+.+..++ .+++....++.-.++.+|.++|+.
T Consensus 253 ~l~v~~~~---~~~v~v~~~~~~g~~~-~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 253 FLYVSNRG---YNTLAVFAVTADGHLT-LIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEET---TTEEEEEEECGGGCEE-EEEEEECS-SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEeCC---CCEEEEEEECCCCcEE-EeEEEecC-CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 88876543 245777777522 210 11122221 1222344444434 455544444433455557777775
No 295
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.12 E-value=1.5e-08 Score=106.61 Aligned_cols=252 Identities=12% Similarity=0.097 Sum_probs=130.6
Q ss_pred CcEEeCCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEE
Q psy4818 95 APQRQENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 173 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~ 173 (734)
...++|.++|.....+ ....-.+|..+..++..+.+...... + .....+++ ||++|+.+.... ..|.++
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~---~-~~p~~~~~--dg~~l~~~~~~~----~~v~~~ 125 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM---G-ADPCYLTT--NGKNIVTANYSG----GSITVF 125 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS---S-SCEEEEEE--CSSEEEEEETTT----TEEEEE
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC---C-CCcEEEEE--CCCEEEEEECCC----CEEEEE
Confidence 3457888888777642 23345567776544554444332111 1 11234455 999887665433 368899
Q ss_pred ECCCCCcccccc-----cc----------cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC-
Q psy4818 174 DVDTGKDYPEVL-----KN----------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD- 237 (734)
Q Consensus 174 dl~~g~~~~~~~-----~~----------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~- 237 (734)
++.+...+.... .+ .....++|||||+.|+++... ...|++++++....
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---------------~~~v~v~~~~~~~~~ 190 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG---------------TDQIHKFNINPNANA 190 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT---------------TTEEEEEEECTTCCT
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC---------------CCEEEEEEEcCCCCc
Confidence 987543221110 00 011358999999998876531 22677777665432
Q ss_pred ---C-Ce-----eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee---ccccc
Q psy4818 238 ---K-DI-----PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDH 305 (734)
Q Consensus 238 ---~-~~-----~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~---~~~~~ 305 (734)
+ -. ......... ....++|||||++|++... ....|++|++.++.... ...+. .+...
T Consensus 191 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~~~---~~~~v~v~~~~~g~~~~------~~~~~~~~~~~~~ 260 (361)
T 3scy_A 191 DNKEKFLTKGTPEAFKVAPGS-GPRHLIFNSDGKFAYLINE---IGGTVIAFRYADGMLDE------IQTVAADTVNAQG 260 (361)
T ss_dssp TTCCCCEEEEEEEEEECCTTC-CEEEEEECTTSSEEEEEET---TTCEEEEEEEETTEEEE------EEEEESCSSCCCC
T ss_pred ccccceeecccccceecCCCC-CCeEEEEcCCCCEEEEEcC---CCCeEEEEEecCCceEE------eEEEecCCCCCCC
Confidence 1 00 112222222 3357899999999887542 22578888887631100 11111 11111
Q ss_pred eEE-EEEecCCeEEEEeCCCCCCceEEEEecC--CCCCCCceEe--ecCCCCceeEEEEEeeCC-EEEEEEEeCCceeEE
Q psy4818 306 HHE-IIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTL--IPEDENRTLDVVAAVANN-KLIVHYIQNVRSVMD 379 (734)
Q Consensus 306 ~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~l--~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~ 379 (734)
... .|+|||++||+...... ..|.+++++ ++. ++.+ ++. ......+.+..++ .+++....++.-.++
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~--~~i~v~~~~~~~g~---~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKA--DGVAIFKVDETNGT---LTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSS--CEEEEEEECTTTCC---EEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred cccEEECCCCCEEEEECCCCC--CEEEEEEEcCCCCc---EEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 123 39999998876543212 235555553 443 2222 122 1222344444334 455554344444566
Q ss_pred EEECCCCce
Q psy4818 380 LHDLNTGKR 388 (734)
Q Consensus 380 ~~dl~~g~~ 388 (734)
.+|+++|+.
T Consensus 334 ~~d~~~g~~ 342 (361)
T 3scy_A 334 ERDQATGLL 342 (361)
T ss_dssp EECTTTCCE
T ss_pred EEECCCCcE
Confidence 678877875
No 296
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.11 E-value=3.4e-08 Score=105.95 Aligned_cols=242 Identities=12% Similarity=0.114 Sum_probs=142.6
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++|+.... + ..|++||+.+++.+.... ....+..++|+|||+.|+....+.
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~-d----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---------- 203 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQ-D----MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG---------- 203 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEET-T----SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS----------
T ss_pred cCccEEEEECCCCCEEEEEeC-C----CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC----------
Confidence 345889999999998886553 2 479999999987654222 222346899999999888666432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCC-CC---------------------eeEEEEEEecCCcEEEEEEecCCCCceE
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPN-GR---------------------SLGLHSEVTDCGRYLLVSTSNNTQGSDL 277 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~-~~---------------------~~~~~~~~SpDG~~l~~~~~~~~~~~~i 277 (734)
.|.+|++.++.. +..+.... .. .....+.|||||++|+.... ...|
T Consensus 204 ------~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i 271 (420)
T 3vl1_A 204 ------TIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----SGVI 271 (420)
T ss_dssp ------CEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET----TSCE
T ss_pred ------cEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC----CCeE
Confidence 577788765431 12222110 00 11223567899999875432 2579
Q ss_pred EEEeCCCCCCCcccCCCCceeeeccc-cceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCcee
Q psy4818 278 HYFDLHSLPDGKISGKFPLKTVIPGM-DHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 355 (734)
Q Consensus 278 ~~~d~~~~~~~~l~~~~~~~~l~~~~-~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 355 (734)
.+||+.++. ....+.... ...... |+|+++.+++.+.. +..|..||+.++.. ....+..+. ...+
T Consensus 272 ~i~d~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---dg~i~vwd~~~~~~-~~~~~~~~~-~~~v 338 (420)
T 3vl1_A 272 TVHNVFSKE--------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---NGMLAQWDLRSPEC-PVGEFLINE-GTPI 338 (420)
T ss_dssp EEEETTTCC--------EEEEECCTTSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTTS-CSEEEEEST-TSCE
T ss_pred EEEECCCCc--------eeEEcccccCCCceeEEEeCCCCCEEEEEeC---CCeEEEEEcCCCcC-chhhhhccC-CCCc
Confidence 999998731 122222222 223333 99999844444433 35699999987541 134444333 4455
Q ss_pred EEEEEeeCCEEEEEEEeCCceeEEEEECCCCceee---------eeCCCCceEEeeccCcccc---eEEEEEecCCCCce
Q psy4818 356 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH---------SFPLDLGQITHISGRRKYN---EVFYGFTSFLQPGT 423 (734)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~---------~l~~~~g~v~~~~~~~d~~---~l~~~~ss~~~P~~ 423 (734)
..+.+.+ +.++++...+ ..+.+|++.+++..+ .+....+.+..+.+++++. .++...+. ..
T Consensus 339 ~~~~~~~-~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~----g~ 411 (420)
T 3vl1_A 339 NNVYFAA-GALFVSSGFD--TSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN----NF 411 (420)
T ss_dssp EEEEEET-TEEEEEETTT--EEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT----TE
T ss_pred eEEEeCC-CCEEEEecCC--ccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC----ce
Confidence 6665665 6677666555 578899986532211 1222234455667777776 55544432 35
Q ss_pred EEEEeC
Q psy4818 424 IYHCNI 429 (734)
Q Consensus 424 ~~~~d~ 429 (734)
+.+|++
T Consensus 412 ~~~~~~ 417 (420)
T 3vl1_A 412 CALYNL 417 (420)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 667776
No 297
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.11 E-value=2.4e-08 Score=104.40 Aligned_cols=249 Identities=10% Similarity=0.044 Sum_probs=141.3
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc--ccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD--YPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~--~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
+...+..++|||||++||..... ..+.+||+.++.. +.. ......+..++|+|||+.|+....+.
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------- 127 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK------- 127 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------
T ss_pred cCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-------
Confidence 34558899999999999866532 3588899877642 211 11122346899999999888776433
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.|++|++.+.... ..+.....+...+..+.|+|||++|+....+ ..|.+|++.++.. ...
T Consensus 128 ---------~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~~w~~~~~~~------~~~ 187 (345)
T 3fm0_A 128 ---------SVWVWEVDEEDEY-ECVSVLNSHTQDVKHVVWHPSQELLASASYD----DTVKLYREEEDDW------VCC 187 (345)
T ss_dssp ---------CEEEEEECTTSCE-EEEEEECCCCSCEEEEEECSSSSCEEEEETT----SCEEEEEEETTEE------EEE
T ss_pred ---------eEEEEECCCCCCe-EEEEEecCcCCCeEEEEECCCCCEEEEEeCC----CcEEEEEecCCCE------EEE
Confidence 5888888765321 1222222233356789999999988754322 4688888766210 001
Q ss_pred eeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC----------CceEe--ecCCCCceeEEEEEeeC
Q psy4818 297 KTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK----------NWKTL--IPEDENRTLDVVAAVAN 363 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----------~~~~l--~~~~~~~~~~~~~~~~~ 363 (734)
..+.......... |+|+|+.|+..+.. ..|.+|+...+... .+..+ +.......+..+.+..+
T Consensus 188 ~~~~~h~~~v~~l~~sp~g~~l~s~s~D----~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 263 (345)
T 3fm0_A 188 ATLEGHESTVWSLAFDPSGQRLASCSDD----RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQL 263 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTT
T ss_pred EEecCCCCceEEEEECCCCCEEEEEeCC----CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecC
Confidence 1122222333333 99999887765543 34666664221100 01111 11111233444555444
Q ss_pred CEEEEEEEeCCceeEEEEECCCCcee---------eeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGKRL---------HSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~~~---------~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+..+++...++ .+.+|+...+... .......+.|..+.++|++..++++.+.. ..+..+++
T Consensus 264 ~~~l~s~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D---g~v~~W~~ 333 (345)
T 3fm0_A 264 TGALATACGDD--AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD---GEVAFWKY 333 (345)
T ss_dssp TCCEEEEETTS--CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT---SCEEEEEE
T ss_pred CCEEEEEeCCC--eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC---CcEEEEEe
Confidence 55566665554 5677776443210 11123356688899999886677666654 36888888
No 298
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.11 E-value=1.1e-08 Score=107.56 Aligned_cols=208 Identities=11% Similarity=0.049 Sum_probs=121.0
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc---cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~---~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..+..+.|||||++|+.... . ..|++||+++++.... .........+.|+||++.|+....+.
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------- 118 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGT-D----RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------- 118 (372)
T ss_dssp SCEEEEEEETTTTEEEEEET-T----SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS---------
T ss_pred CcccEEEEeCCCCEEEEEcC-C----CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC---------
Confidence 35789999999999987653 2 3599999988863221 11222346899999999888776432
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc---------
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK--------- 289 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~--------- 289 (734)
.|+++++.+.............+...+..+.|+|||++|+.... ...|++||+.......
T Consensus 119 -------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 119 -------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC----DFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp -------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET----TSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred -------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC----CCCEEEEEccccccccccccccccc
Confidence 46777766553211111111222335678999999999875432 2578999975310000
Q ss_pred -ccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 290 -ISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 290 -l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
+........+.......... |+|+++.|+..+. +..|..+|+.++. ....+... ...+..+.+..++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKM---AVATLASE-TLPLLAVTFITESSLV 259 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEEGGGTT---EEEEEECS-SCCEEEEEEEETTEEE
T ss_pred ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC----CCEEEEEECCCCc---eeEEEccC-CCCeEEEEEecCCCEE
Confidence 00001111111222222333 8999987776554 3469999997665 23333332 3344555555556766
Q ss_pred EEEEeCCceeEEEEECCC
Q psy4818 368 VHYIQNVRSVMDLHDLNT 385 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~~ 385 (734)
+.. .+ ..+++|++.+
T Consensus 260 ~~~-~d--~~i~i~~~~~ 274 (372)
T 1k8k_C 260 AAG-HD--CFPVLFTYDS 274 (372)
T ss_dssp EEE-TT--SSCEEEEEET
T ss_pred EEE-eC--CeEEEEEccC
Confidence 655 44 4577777755
No 299
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.10 E-value=7.5e-10 Score=114.37 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=66.7
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhH----HHHHHHHHHH
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD----FQAAAEYMIN 561 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D----~~~~~~~l~~ 561 (734)
..|+||++||+.++.. .|.. +...|++ .+|.|+++|+||.|.... . .....++++ +.+.++.|..
T Consensus 37 ~~p~lvllHG~~~~~~--~w~~-~~~~L~~~~~~~via~Dl~GhG~S~~---~----~~~~~~~~~~a~dl~~~l~~l~~ 106 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSAL--SWAV-FTAAIISRVQCRIVALDLRSHGETKV---K----NPEDLSAETMAKDVGNVVEAMYG 106 (316)
T ss_dssp SSCEEEEECCTTCCGG--GGHH-HHHHHHTTBCCEEEEECCTTSTTCBC---S----CTTCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCcccc--cHHH-HHHHHhhcCCeEEEEecCCCCCCCCC---C----CccccCHHHHHHHHHHHHHHHhc
Confidence 4578999999765443 3443 3455654 389999999999664321 1 011233444 4444544421
Q ss_pred cCCCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCc
Q psy4818 562 KKYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGA 602 (734)
Q Consensus 562 ~~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 602 (734)
+ . ++++.|+||||||++++.++.+ +|+ ++++|+..+.
T Consensus 107 -~-~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 107 -D-L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp -T-C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred -c-C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 1 1 2589999999999999999985 577 7888876653
No 300
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=1.5e-08 Score=103.39 Aligned_cols=235 Identities=13% Similarity=0.058 Sum_probs=140.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.|+|+++.|.|+-... ..|+.+|.++++....... .....++|+|||+ |+... .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~dG~-l~v~~-~--------------- 72 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA----KKVCRWDSFTKQVQRVTMD-APVSSVALRQSGG-YVATI-G--------------- 72 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETTTCCEEEEECS-SCEEEEEEBTTSS-EEEEE-T---------------
T ss_pred ccCCeEECCCCEEEEEECCC----CEEEEEECCCCcEEEEeCC-CceEEEEECCCCC-EEEEE-C---------------
Confidence 45899999988888765433 3699999998875322222 2346889999998 44433 1
Q ss_pred CcEEEEEECCCCCCCCeeEEecCC--CCeeEEEEEEecCCcEEEEEEecCC--------CCceEEEEeCCCCCCCcccCC
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPN--GRSLGLHSEVTDCGRYLLVSTSNNT--------QGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~i~~~d~~~~~~~~l~~~ 293 (734)
..|++++..++..+ .+..... ......++.++|||+ |++...... ....||.++.++ .
T Consensus 73 -~~l~~~d~~~g~~~--~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~------- 140 (297)
T 3g4e_A 73 -TKFCALNWKEQSAV--VLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH-H------- 140 (297)
T ss_dssp -TEEEEEETTTTEEE--EEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS-C-------
T ss_pred -CeEEEEECCCCcEE--EEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC-C-------
Confidence 16888888765321 2222211 122456788999999 444433211 125788888754 1
Q ss_pred CCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecC--CCCCCCceEeecCC-CCceeEEEEEeeCCEEEEE
Q psy4818 294 FPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~ 369 (734)
...+......... .|+|||+.+|+.... ..+|++++++ ++...+-+.+..-. .......+.+..++.+++.
T Consensus 141 --~~~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 141 --VKKYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp --EEEEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred --EEEEeeccccccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 1222222222222 399999988876543 3468888863 33210011122111 1123445555555677766
Q ss_pred EEeCCceeEEEEECCCCceeeeeCCCCceEEeeccC-cccceEEEEEecCC
Q psy4818 370 YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGR-RKYNEVFYGFTSFL 419 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~-~d~~~l~~~~ss~~ 419 (734)
...+ ..|+++|.++|+.+..+..+...+.++.+. ++++.|+++.....
T Consensus 216 ~~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 216 CYNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EcCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 5443 469999997799888887775556677776 78888988876543
No 301
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.9e-09 Score=116.75 Aligned_cols=238 Identities=8% Similarity=0.073 Sum_probs=135.0
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-----cccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-----VKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-----~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
..+..++|||||++||-... +| .+.+||.++ .+...... ..+..++|||||+.|+....+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~-dg----~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG------- 151 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSN-NG----NVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG------- 151 (588)
T ss_dssp CCEEEEEECSSSSCEEEEET-TS----CEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS-------
T ss_pred CcEEEEEECCCCCEEEEEeC-CC----cEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC-------
Confidence 34889999999999996654 32 488898544 21110111 1246899999999998877543
Q ss_pred CcccccCCcEEEEEECCCCCCCCe---eEEec----CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDI---PVVEF----PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 289 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~---~v~~~----~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 289 (734)
.|.+|++.++..... .+... ..+..++..++||||| |+..+ ..+.+++|++.++...
T Consensus 152 ---------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass----~D~tVrlWd~~~~~~~- 215 (588)
T 2j04_A 152 ---------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAAL----SNNSVFSMTVSASSHQ- 215 (588)
T ss_dssp ---------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEE----TTCCEEEECCCSSSSC-
T ss_pred ---------EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEe----CCCeEEEEECCCCccc-
Confidence 788899887532111 12221 2234588999999999 44322 2368999999873210
Q ss_pred ccCCCCceeeecc-ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE--eeCCE
Q psy4818 290 ISGKFPLKTVIPG-MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA--VANNK 365 (734)
Q Consensus 290 l~~~~~~~~l~~~-~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~ 365 (734)
..+..+..+ ....... |+ |+.|+..+ ...|..|++.++. ...+..+ ....+..+.+ ..++.
T Consensus 216 ----~~~~tL~~~h~~~V~svaFs--g~~LASa~-----~~tIkLWd~~~~~---~~~~~~g-h~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 216 ----PVSRMIQNASRRKITDLKIV--DYKVVLTC-----PGYVHKIDLKNYS---ISSLKTG-SLENFHIIPLNHEKEST 280 (588)
T ss_dssp ----CCEEEEECCCSSCCCCEEEE--TTEEEEEC-----SSEEEEEETTTTE---EEEEECS-CCSCCCEEEETTCSSCE
T ss_pred ----cceeeecccccCcEEEEEEE--CCEEEEEe-----CCeEEEEECCCCe---EEEEEcC-CCceEEEEEeeeCCCCC
Confidence 011223212 2222222 77 56666443 1479999998765 2233323 2344555666 55456
Q ss_pred EEEEEEeCCceeEEEE-----ECC----------------CCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceE
Q psy4818 366 LIVHYIQNVRSVMDLH-----DLN----------------TGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 424 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~-----dl~----------------~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~ 424 (734)
.++.+.++|. +|+.. ... .|+.+..+.. ...|.+++++|||..+++.+.= |..+
T Consensus 281 ~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i---~~~~ 355 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYDM---ERVA 355 (588)
T ss_dssp EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEEE---ECSS
T ss_pred EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEec---cCce
Confidence 6666666665 44443 210 1111111211 3346778888988777665532 4455
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
..|..
T Consensus 356 ~~y~i 360 (588)
T 2j04_A 356 FKYKI 360 (588)
T ss_dssp CCCCC
T ss_pred eEEee
Confidence 55555
No 302
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.10 E-value=6.6e-09 Score=108.67 Aligned_cols=241 Identities=7% Similarity=0.011 Sum_probs=137.7
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc----cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~----~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+..++|||||++||..... ..|++||++++..... ......+..++|||||+.|+....+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------- 83 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------- 83 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS---------
T ss_pred cEEEEEECCCCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC---------
Confidence 36789999999999966532 3699999988753211 11112346899999999888776543
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.+.+|++.+...+ .+.....+...+..++|+|||++|+.... ...|++||+.++.... ....
T Consensus 84 -------~v~iw~~~~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~s~----D~~v~iwd~~~~~~~~-----~~~~ 145 (345)
T 3fm0_A 84 -------TTCIWKKNQDDFE--CVTTLEGHENEVKSVAWAPSGNLLATCSR----DKSVWVWEVDEEDEYE-----CVSV 145 (345)
T ss_dssp -------CEEEEEECCC-EE--EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEEECTTSCEE-----EEEE
T ss_pred -------cEEEEEccCCCeE--EEEEccCCCCCceEEEEeCCCCEEEEEEC----CCeEEEEECCCCCCeE-----EEEE
Confidence 4667776654322 22222233445678999999999885432 2578999987621100 0111
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCce--EeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK--TLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
+.......... |+|+++.|+..+.. ..|.++++.++. +. ..+... ...+..+.+..++..+++...++
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~~w~~~~~~---~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~- 216 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYD----DTVKLYREEEDD---WVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDR- 216 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETT----SCEEEEEEETTE---EEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS-
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCC----CcEEEEEecCCC---EEEEEEecCC-CCceEEEEECCCCCEEEEEeCCC-
Confidence 21222222333 99999877765543 347777776543 22 112222 34455666655566777777664
Q ss_pred eeEEEEECCCCc---------------eeeeeCC-CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGK---------------RLHSFPL-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~---------------~~~~l~~-~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|.+|++..+. .+..+.. ....+..+.+++++..++... .. ..+..++.
T Consensus 217 -~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d---~~i~vw~~ 281 (345)
T 3fm0_A 217 -TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC-GD---DAIRVFQE 281 (345)
T ss_dssp -CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE-TT---SCEEEEEE
T ss_pred -eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe-CC---CeEEEEEe
Confidence 56677642111 1112222 234566777788776555433 22 24555655
No 303
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.09 E-value=1.6e-08 Score=105.69 Aligned_cols=237 Identities=14% Similarity=0.077 Sum_probs=140.2
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++|+-... ...|++||+.+++.+.... ....+..++|+|||+.|+-...+.
T Consensus 76 ~~~V~~~~~~~~~~~l~s~s~-----D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~---------- 140 (343)
T 2xzm_R 76 NHFVSDLALSQENCFAISSSW-----DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAER---------- 140 (343)
T ss_dssp SSCEEEEEECSSTTEEEEEET-----TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTS----------
T ss_pred CCceEEEEECCCCCEEEEEcC-----CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCC----------
Confidence 345788999999998874432 2479999999988643222 222346899999999887665432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEe-cCCCCeeEEEEEEecCC----------cEEEEEEecCCCCceEEEEeCCCCCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCG----------RYLLVSTSNNTQGSDLHYFDLHSLPDG 288 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~-~~~~~~~~~~~~~SpDG----------~~l~~~~~~~~~~~~i~~~d~~~~~~~ 288 (734)
.|.+|++.... ..... ...+...+..+.|+|++ .+|+... ....|.+||...
T Consensus 141 ------~i~~wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~---- 203 (343)
T 2xzm_R 141 ------EIKLWNILGEC---KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG----WDGRLKVWNTNF---- 203 (343)
T ss_dssp ------CEEEEESSSCE---EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE----TTSEEEEEETTT----
T ss_pred ------EEEEEeccCCc---eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc----CCCEEEEEcCCC----
Confidence 58888875321 11111 11233456788999998 4555322 226789999543
Q ss_pred cccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 289 KISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 289 ~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
.....+.......... |+|||+.|+..+. +..|..||+..... ....+... ..+..+.+..++.++
T Consensus 204 -----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~v~iwd~~~~~~--~~~~~~~~--~~v~~v~~sp~~~~l 270 (343)
T 2xzm_R 204 -----QIRYTFKAHESNVNHLSISPNGKYIATGGK----DKKLLIWDILNLTY--PQREFDAG--STINQIAFNPKLQWV 270 (343)
T ss_dssp -----EEEEEEECCSSCEEEEEECTTSSEEEEEET----TCEEEEEESSCCSS--CSEEEECS--SCEEEEEECSSSCEE
T ss_pred -----ceeEEEcCccccceEEEECCCCCEEEEEcC----CCeEEEEECCCCcc--cceeecCC--CcEEEEEECCCCCEE
Confidence 1111222222233333 9999998775543 35699999843321 12222222 235556555545555
Q ss_pred EEEEeCCceeEEEEECCCCceee--eeC-----------CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSVMDLHDLNTGKRLH--SFP-----------LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~~g~~~~--~l~-----------~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+... + ..+.+|++.+++... .+. .....+..++++|+++.++..... ..+..|++
T Consensus 271 a~~~-d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D----g~v~~w~~ 338 (343)
T 2xzm_R 271 AVGT-D--QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD----GVIRTFSF 338 (343)
T ss_dssp EEEE-S--SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT----SEEEEEEE
T ss_pred EEEC-C--CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC----ceEEEEEE
Confidence 5443 3 258999997665433 332 123456788889998766544322 36777777
No 304
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.09 E-value=5.5e-10 Score=111.28 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=94.9
Q ss_pred hhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC-----ceeEEEEcCCcchhccccccccCcccccccCC
Q psy4818 549 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAALILVGALDMLRFNKFTIAYYSESEFGS 623 (734)
Q Consensus 549 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 623 (734)
.+|+.++++.|.++. .-+++.++|||+||.+++.++.++|+ .++++|+.++..+....... ...+ ...+.
T Consensus 77 a~~l~~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~-~~~~~ 151 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN--GMDL-SFKKL 151 (254)
T ss_dssp HHHHHHHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH--CSCT-TCSSC
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc--cccc-ccccC
Confidence 345555567776652 23689999999999999999999998 78999988876654322110 0001 11133
Q ss_pred CCCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecC------CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy4818 624 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 697 (734)
Q Consensus 624 ~~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~------~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 697 (734)
|.....+..+.... ..+. .+.| +|+++|. +|..||+..+..+...++.. ...+....+.
T Consensus 152 p~~~~~~~~~~~~~--~~~~-----~~~~-vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~-------~~~~~~~~~~ 216 (254)
T 3ds8_A 152 PNSTPQMDYFIKNQ--TEVS-----PDLE-VLAIAGELSEDNPTDGIVPTISSLATRLFMPGS-------AKAYIEDIQV 216 (254)
T ss_dssp SSCCHHHHHHHHTG--GGSC-----TTCE-EEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTT-------BSEEEEEEEE
T ss_pred CcchHHHHHHHHHH--hhCC-----CCcE-EEEEEecCCCCCCCCcEeeHHHHHHHHHHhhcc-------CcceEEEEEe
Confidence 33223333332111 1111 1233 9999999 99999999887777666543 3345555555
Q ss_pred C--CCCCCCCchHHhHHHHHHHHHHHHHHc
Q psy4818 698 D--AGHGQGTPLMKSIEEMTDIYVFLMKSL 725 (734)
Q Consensus 698 ~--~gH~~~~~~~~~~~~~~~~~~fl~~~l 725 (734)
+ ++|...... -+....+..||.+..
T Consensus 217 g~~a~Hs~l~~~---~~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 217 GEDAVHQTLHET---PKSIEKTYWFLEKFK 243 (254)
T ss_dssp SGGGCGGGGGGS---HHHHHHHHHHHHTCC
T ss_pred CCCCchhcccCC---HHHHHHHHHHHHHhc
Confidence 5 678765432 246666788887754
No 305
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.09 E-value=4.6e-08 Score=103.63 Aligned_cols=244 Identities=11% Similarity=0.082 Sum_probs=142.5
Q ss_pred cEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc---cccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 141 TTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN---VKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 141 ~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~---~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
...+..+.||| |+++|+... .+ ..|++||+.++......... ..+..++|+||++.|+....+
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------- 184 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSS-IR----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-------- 184 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEE-TT----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT--------
T ss_pred CCceeEEEeCCCCCCEEEEEe-CC----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC--------
Confidence 35588999999 667666543 23 36999999875432221111 224689999999988776543
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
..|+++++.. +.+..+. .+...+..+.|+|+|++++++... ...|.+||+.++... ...
T Consensus 185 --------~~i~i~d~~~---~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~-----~~~ 243 (383)
T 3ei3_B 185 --------GRLLLLGLDG---HEIFKEK--LHKAKVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKDK-----NSY 243 (383)
T ss_dssp --------SEEEEEETTS---CEEEEEE--CSSSCEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCST-----TCE
T ss_pred --------CCEEEEECCC---CEEEEec--cCCCcEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCcc-----cce
Confidence 2789999842 2222232 233467789999999954444432 257999999863210 112
Q ss_pred eeeeccccceEEE-EEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-----CceeEEEEEeeCCEEEEE
Q psy4818 297 KTVIPGMDHHHEI-IAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 297 ~~l~~~~~~~~~~-~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~l~~~ 369 (734)
............. |+| +|+.|+..+. +..|.++|+.+... ...+..+.. ...+.....+++..+.+.
T Consensus 244 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 244 IAEMPHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWSK--PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG 317 (383)
T ss_dssp EEEEECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBTTS--CSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred EEEecCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCCcc--ccccccccccccccccceEEeccCCCCceEEE
Confidence 2222333333333 899 9888776554 34699999976542 222322210 111111111222222222
Q ss_pred EEe------CCceeEEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 370 YIQ------NVRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 370 ~~~------~~~~~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
... .....|++||+.+++.+..+..+ .+.+..+.+++++..++.. + . ..+.+||+
T Consensus 318 ~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s-d---~~i~iw~~ 380 (383)
T 3ei3_B 318 RYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M-G---FNILIWNR 380 (383)
T ss_dssp CBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E-T---TEEEEEEC
T ss_pred ecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c-C---CcEEEEec
Confidence 221 12357999999999988888753 3445455788888755443 3 2 57899988
No 306
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.09 E-value=5.7e-08 Score=100.63 Aligned_cols=253 Identities=10% Similarity=0.090 Sum_probs=143.2
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcc----cc-cccccccCeeEEEc--CCcEEEEEEEecCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY----PE-VLKNVKFPSISWTH--DHKGFFYNQYCDING 212 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~----~~-~~~~~~~~~~~wSp--Dg~~l~y~~~~~~~~ 212 (734)
+...+..++|||||++||.... . ..|++||+.++... .. ......+..++|+| |++.|+....+.
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--- 81 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSS-D----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK--- 81 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEET-T----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS---
T ss_pred cccceeEEEEcCCCCEEEEeeC-C----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC---
Confidence 4455889999999999987653 2 37999999876421 11 11222346889999 688887766432
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCC-----eeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~-----~~v~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
.|.+|++.++.... ..+.....+...+..+.|+|+ |++|+.... ...|++||+.++
T Consensus 82 -------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~v~iwd~~~~ 144 (351)
T 3f3f_A 82 -------------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN----DGILRLYDALEP 144 (351)
T ss_dssp -------------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET----TCEEEEEECSST
T ss_pred -------------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC----CCcEEEecCCCh
Confidence 57888887654321 223332233446778999999 998886432 258999999873
Q ss_pred CCCc-ccCCCCcee--ee--ccccceEEE-EEec---CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeE
Q psy4818 286 PDGK-ISGKFPLKT--VI--PGMDHHHEI-IANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLD 356 (734)
Q Consensus 286 ~~~~-l~~~~~~~~--l~--~~~~~~~~~-~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 356 (734)
.... +........ +. ......... |+|+ ++.++..+.. ..+..++...+... ....+... ...+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~~~~~~~~~~~~~~-~~~~~~~h-~~~i~ 218 (351)
T 3f3f_A 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE----QAIIYQRGKDGKLH-VAAKLPGH-KSLIR 218 (351)
T ss_dssp TCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT----EEEEEEECTTSCEE-EEEECCCC-CSCEE
T ss_pred HHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC----CcEEEEccCCCcee-eeeecCCC-Cccee
Confidence 2111 000000000 00 111122222 7886 6666654443 33544444443310 01112222 34455
Q ss_pred EEEEeeCC----EEEEEEEeCCceeEEEEECCCC----------------------------------------------
Q psy4818 357 VVAAVANN----KLIVHYIQNVRSVMDLHDLNTG---------------------------------------------- 386 (734)
Q Consensus 357 ~~~~~~~~----~l~~~~~~~~~~~l~~~dl~~g---------------------------------------------- 386 (734)
.+.+..++ .++++...++ .|++||+.++
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDG--RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTS--CEEEEEEEECC---------------------------------------CCSEEE
T ss_pred EEEECCCCCCcceEEEEEcCCC--eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 66665544 6777777664 6778887544
Q ss_pred ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 387 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 387 ~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+..+....+.|..+.++++++.++ +.+.. ..+..||+
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d---g~v~iw~~ 335 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILS-SAGDD---GKVRLWKA 335 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEE-EEETT---SCEEEEEE
T ss_pred cEEEEEecccccEEEEEEcCCCCEEE-EecCC---CcEEEEec
Confidence 23334444456677888888876554 33332 36888888
No 307
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.08 E-value=1.1e-09 Score=115.82 Aligned_cols=243 Identities=9% Similarity=-0.030 Sum_probs=137.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC--Cccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--KDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g--~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
+..++|||||++||... ....|++||+.++ +.+... .....+..++|+|||+.|+....+.
T Consensus 14 v~~~~~s~~g~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~----------- 77 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTT-----ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR----------- 77 (377)
T ss_dssp CSCCEECSSSSEEECCC-----SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS-----------
T ss_pred EEEEEECCCCCEEEEec-----CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC-----------
Confidence 67889999999998543 2346999999887 433222 1222346899999999888776432
Q ss_pred ccCCcEEEEEECCCCC-CCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 221 AHMGQKIYYHVLGTEQ-DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|++|++.++. ... +.....+...+..+.|+|||++|+.... ...|.+||+.++..-. ....+
T Consensus 78 -----~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~-----~~~~~ 141 (377)
T 3dwl_C 78 -----NAYVYEKRPDGTWKQ--TLVLLRLNRAATFVRWSPNEDKFAVGSG----ARVISVCYFEQENDWW-----VSKHL 141 (377)
T ss_dssp -----SEEEC------CCCC--EEECCCCSSCEEEEECCTTSSCCEEEES----SSCEEECCC-----CC-----CCEEE
T ss_pred -----eEEEEEcCCCCceee--eeEecccCCceEEEEECCCCCEEEEEec----CCeEEEEEECCcccce-----eeeEe
Confidence 58888887654 111 2222223345678999999999886443 2578999998732100 11222
Q ss_pred ec-cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC------------CceEeecC-CCCceeEEEEEeeCC
Q psy4818 300 IP-GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK------------NWKTLIPE-DENRTLDVVAAVANN 364 (734)
Q Consensus 300 ~~-~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~------------~~~~l~~~-~~~~~~~~~~~~~~~ 364 (734)
.. ........ |+|+++.|+..+.. ..|..+|+...... ....++.. .....+..+.+..++
T Consensus 142 ~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSG 217 (377)
T ss_dssp CSSCCSCEEEEEECTTSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTS
T ss_pred ecccCCCeEEEEEcCCCCEEEEEeCC----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCC
Confidence 22 22233333 89999877765543 34777887532100 00111111 112334555555546
Q ss_pred EEEEEEEeCCceeEEEEECCCCce----eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGKR----LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~~----~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++++...+ ..|++||+.+++. +..+....+.+..+.+++++..+ ++.+. ..+.+++.
T Consensus 218 ~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~----~~~~~~~~ 279 (377)
T 3dwl_C 218 NALAYAGHD--SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV-AAGYN----YSPILLQG 279 (377)
T ss_dssp SCEEEEETT--TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE-EEESS----SSEEEECC
T ss_pred CEEEEEeCC--CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE-EEEcC----CcEEEEEe
Confidence 666666655 4788999988875 45555555667788888887544 33322 23556666
No 308
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.07 E-value=4.4e-08 Score=103.26 Aligned_cols=259 Identities=9% Similarity=-0.046 Sum_probs=127.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC-CCCcccccc--cccccCeeEEEcCCcEE-EEEEEecCCCCCCCCcc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDYPEVL--KNVKFPSISWTHDHKGF-FYNQYCDINGTADGTET 219 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~-~g~~~~~~~--~~~~~~~~~wSpDg~~l-~y~~~~~~~~~~~~~~~ 219 (734)
...++|||||++|+.+.. . .|.+||+. +|+.+.... .......++|||||+.| +|+.... ...
T Consensus 42 ~~~~a~spdg~~l~~~~~-~-----~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~-------~~~ 108 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAM-K-----KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQP-------PYA 108 (365)
T ss_dssp CSEEEECTTSSEEEEEEB-T-----EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSST-------TCC
T ss_pred CcEEEECCCCCEEEEEcc-c-----eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCC-------cce
Confidence 457899999998864432 2 68889887 776432211 10113468999999974 4443200 000
Q ss_pred c-cc----CCcEEEEEECCC-CCCCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC-CCCCCccc
Q psy4818 220 T-AH----MGQKIYYHVLGT-EQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-SLPDGKIS 291 (734)
Q Consensus 220 ~-~~----~~~~l~~~~l~t-~~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~-~~~~~~l~ 291 (734)
. .+ ....+.++++.. +.... +.++... ......++.|||||++|++.. . ....|++++++ ++. ++
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~-~--~~~~v~~~~~~~~g~---~~ 181 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ-ENTGIHGMVFDPTETYLYSAD-L--TANKLWTHRKLASGE---VE 181 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC-TTCCEEEEEECTTSSEEEEEE-T--TTTEEEEEEECTTSC---EE
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeC-CCCcceEEEECCCCCEEEEEc-C--CCCEEEEEEECCCCC---EE
Confidence 0 00 123566666653 21111 1111111 122456789999999987543 2 22589999987 521 10
Q ss_pred CCCCceeee--c-cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCC-ceE--eecCC-CC-c-------eeE
Q psy4818 292 GKFPLKTVI--P-GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN-WKT--LIPED-EN-R-------TLD 356 (734)
Q Consensus 292 ~~~~~~~l~--~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~--l~~~~-~~-~-------~~~ 356 (734)
....+. . +.......|+|||+.+|+....+ ..-.++.++.+++.... ... .++.. .. . ...
T Consensus 182 ---~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 182 ---LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp ---EEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred ---EeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 011111 0 11112224999999888765432 22234444543443100 011 12221 01 1 234
Q ss_pred EEE-EeeCC-EEEEEEEeCC---ceeEEEEECC-CCceee---eeCCCCceEEeeccCc---ccceEEEEEecCCCCceE
Q psy4818 357 VVA-AVANN-KLIVHYIQNV---RSVMDLHDLN-TGKRLH---SFPLDLGQITHISGRR---KYNEVFYGFTSFLQPGTI 424 (734)
Q Consensus 357 ~~~-~~~~~-~l~~~~~~~~---~~~l~~~dl~-~g~~~~---~l~~~~g~v~~~~~~~---d~~~l~~~~ss~~~P~~~ 424 (734)
.+. +..++ .+++...... ...|.+|++. +|+..+ .+.........+.++| |++.+++..... ..+
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~---~~v 334 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE---GWL 334 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS---CEE
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC---CeE
Confidence 454 54434 5554433222 1278888874 576432 1221211223556677 677776553321 356
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
.++++
T Consensus 335 ~v~~~ 339 (365)
T 1jof_A 335 EIYRW 339 (365)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66666
No 309
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.07 E-value=3.8e-08 Score=103.27 Aligned_cols=223 Identities=9% Similarity=0.018 Sum_probs=137.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-------ccccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-------EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-------~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
+...+|||||++||... ....+.+|++..+.... ............|+||++.|+....+.
T Consensus 109 v~~~~~sp~g~~lasg~-----~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~------- 176 (354)
T 2pbi_B 109 VMACAYAPSGCAIACGG-----LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG------- 176 (354)
T ss_dssp CCEEEECTTSSEEEEES-----TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS-------
T ss_pred EEEEEECCCCCEEEEee-----CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC-------
Confidence 56789999999988543 22468888886542110 001111235789999999888766432
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec--CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD--CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
.|.+|++.++.. +..+.. +...+..+.++| +|++|+... ....|.+||+.++.
T Consensus 177 ---------~v~lwd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~g~~l~sgs----~Dg~v~~wd~~~~~-------- 231 (354)
T 2pbi_B 177 ---------TCALWDVESGQL--LQSFHG--HGADVLCLDLAPSETGNTFVSGG----CDKKAMVWDMRSGQ-------- 231 (354)
T ss_dssp ---------EEEEEETTTCCE--EEEEEC--CSSCEEEEEECCCSSCCEEEEEE----TTSCEEEEETTTCC--------
T ss_pred ---------cEEEEeCCCCeE--EEEEcC--CCCCeEEEEEEeCCCCCEEEEEe----CCCeEEEEECCCCc--------
Confidence 789999987642 223332 222345567766 577776432 22579999998731
Q ss_pred CceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEe
Q psy4818 295 PLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 295 ~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
....+.......... |+|+|+.|+..+. +..|..||+.+.. ...+.... ....+..+.+..++.++++...
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSD----DATCRLYDLRADR---EVAIYSKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE---EEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEECCCCc---EEEEEcCCCcccceeEEEEeCCCCEEEEEEC
Confidence 122222222223333 8999987775554 2458889987653 12222222 1123344555544666666665
Q ss_pred CCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEE
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 412 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~ 412 (734)
+ ..+++||+.+|+.+..+....+.|..+.++|++..++
T Consensus 305 d--~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 305 D--YTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp T--SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred C--CcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 5 4799999988887777776677788899999987554
No 310
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.07 E-value=5.1e-08 Score=100.59 Aligned_cols=235 Identities=10% Similarity=0.088 Sum_probs=140.6
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+....|||||++|+-... ...|++||+.+|+.+.... ....+..+.|+||++.|+-...+.
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s~-----D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---------- 129 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSASW-----DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDK---------- 129 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTS----------
T ss_pred cccEEEEEECCCCCEEEEEeC-----CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCC----------
Confidence 345788999999999885543 2479999999998654322 222346789999999887666433
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCc------EEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGR------YLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~------~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++... .+.....+...+..+.++|+++ .|+ +.. ....|.+||+.++.
T Consensus 130 ------~i~vwd~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~-s~~---~d~~i~~wd~~~~~------- 187 (319)
T 3frx_A 130 ------TIKVWTIKGQ-----CLATLLGHNDWVSQVRVVPNEKADDDSVTII-SAG---NDKMVKAWNLNQFQ------- 187 (319)
T ss_dssp ------CEEEEETTSC-----EEEEECCCSSCEEEEEECCC------CCEEE-EEE---TTSCEEEEETTTTE-------
T ss_pred ------eEEEEECCCC-----eEEEEeccCCcEEEEEEccCCCCCCCccEEE-EEe---CCCEEEEEECCcch-------
Confidence 5788887532 1222222344566788888543 444 332 22579999998721
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
....+.......... |+|+|+.|+..+. +..|.+||+.++. ....+... ..+..+.+..++.+++....
T Consensus 188 -~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~~---~~~~~~~~--~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 188 -IEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAKK---AMYTLSAQ--DEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp -EEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE---EEEEEECC--SCEEEEEECSSSSEEEEEET
T ss_pred -hheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCc---EEEEecCC--CcEEEEEEcCCCCEEEEEcC
Confidence 112222222333333 8999987775443 3569999998764 12222222 23445555554555555544
Q ss_pred CCceeEEEEECCCCceeeeeCCC--------CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLD--------LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~--------~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ .+.+|++..+.....+... ...+.++.++||++.++.. +.. ..+.+||+
T Consensus 258 ~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~D---g~i~vWd~ 315 (319)
T 3frx_A 258 T---GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTD---NVIRVWQV 315 (319)
T ss_dssp T---EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETT---SCEEEEEE
T ss_pred C---CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ecC---ceEEEEEE
Confidence 3 4778888655544444321 2345678889998766543 332 35788887
No 311
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.06 E-value=7.6e-11 Score=130.39 Aligned_cols=131 Identities=20% Similarity=0.171 Sum_probs=88.8
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcC---CccccHHHHHHHHhcCeEEEEEecccC-CCCCchhhhccc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV---LPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWHNAGR 541 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~~~~~~~~ 541 (734)
+.|. +.+.++.|+.. ..++.|+||++|||..... ...+.. ..+..+.|++|+.+|||.+ -||+..... .
T Consensus 93 ~edc--l~l~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~--~~la~~~g~vvv~~nYRlg~~Gf~~~~~~--~ 165 (543)
T 2ha2_A 93 SEDC--LYLNVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDG--RFLAQVEGAVLVSMNYRVGTFGFLALPGS--R 165 (543)
T ss_dssp ESCC--CEEEEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCTTC--S
T ss_pred CCcC--CeEEEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCCh--HHHHhcCCEEEEEecccccccccccCCCC--C
Confidence 4555 45566778652 3456899999999853322 223333 2333446999999999953 223211100 0
Q ss_pred cccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 603 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 603 (734)
...+...+.|++++++|+.++- -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 166 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 1122335889999999998762 26999999999999999999887653 46899999999854
No 312
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.06 E-value=2.1e-10 Score=117.56 Aligned_cols=209 Identities=12% Similarity=-0.066 Sum_probs=117.3
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHH-HHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE-YMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~ 563 (734)
.+..|.||++||..+......|.. +...|. .+|.|+.+|+||.|... .....++++...+. .+.+.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~----------~~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTR-LAGALR-GIAPVRAVPQPGYEEGE----------PLPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHH-HHHHTS-SSCCBCCCCCTTSSTTC----------CBCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEECCCcccCcHHHHHH-HHHhcC-CCceEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh-
Confidence 456789999999866542234443 345565 48999999999955421 11235666655433 44443
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCCcchhcc-ccc---cccCcccccccCCCCCHHHHH---H-
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALDMLR-FNK---FTIAYYSESEFGSPNNKTHFH---N- 632 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d~~~-~~~---~~~~~~~~~~~g~~~~~~~~~---~- 632 (734)
.+.+++.++|+|+||.+++.++.++| +.++++|+..+...... ... ......+......+....... .
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAY 209 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHHH
Confidence 33467999999999999999999987 47899998877543211 000 000000000000011111111 1
Q ss_pred HHhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCC-chHHhH
Q psy4818 633 LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGT-PLMKSI 711 (734)
Q Consensus 633 ~~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~ 711 (734)
+.....+ .... +++| +|+++| .|+.+++.+ .. +.+. ....++++++++ ||...- ... .
T Consensus 210 ~~~~~~~-~~~~----i~~P-~lii~G-~d~~~~~~~-~~----~~~~------~~~~~~~~~i~g-gH~~~~~e~~--~ 268 (300)
T 1kez_A 210 DRLTGQW-RPRE----TGLP-TLLVSA-GEPMGPWPD-DS----WKPT------WPFEHDTVAVPG-DHFTMVQEHA--D 268 (300)
T ss_dssp HHHTTTC-CCCC----CSCC-BEEEEE-SSCSSCCCS-SC----CSCC------CSSCCEEEEESS-CTTTSSSSCS--H
T ss_pred HHHHhcC-CCCC----CCCC-EEEEEe-CCCCCCCcc-cc----hhhh------cCCCCeEEEecC-CChhhccccH--H
Confidence 1111111 1122 7777 999999 577777765 11 2211 123467888999 998753 322 3
Q ss_pred HHHHHHHHHHHHHcCCC
Q psy4818 712 EEMTDIYVFLMKSLGLK 728 (734)
Q Consensus 712 ~~~~~~~~fl~~~l~~~ 728 (734)
+....+.+||.+.....
T Consensus 269 ~~~~~i~~fl~~~~~~~ 285 (300)
T 1kez_A 269 AIARHIDAWLGGGNSSS 285 (300)
T ss_dssp HHHHHHHHHHTCC----
T ss_pred HHHHHHHHHHHhccCCC
Confidence 55666788887655433
No 313
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=2.6e-07 Score=97.35 Aligned_cols=288 Identities=11% Similarity=0.066 Sum_probs=150.5
Q ss_pred CcEEeCCeEEEEEEc-CCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC-----CCCceE
Q psy4818 95 APQRQENNYFYFHNK-GLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDWN 168 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~-----~g~~~~ 168 (734)
.|.++|.++| ..+. +......+++.+...+....-+. . +.. - ++.+||||++|+++... .|....
T Consensus 27 ~~~~~~~~~y-v~~~~~~~~~~~v~v~D~~t~~~~~~i~-----~-g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 27 APGADGRRSY-INLPAHHSAIIQQWVLDAGSGSILGHVN-----G-GFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred cCCCCCCEEE-EeCCcccCCccEEEEEECCCCeEEEEec-----C-CCC-C-CeEECCCCCEEEEEeccccccccCCCCC
Confidence 4446775544 4443 22111156666654443221111 1 111 2 89999999998887532 122235
Q ss_pred EEEEEECCCCCccccc-cc-------ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCe
Q psy4818 169 TLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 240 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~-~~-------~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~ 240 (734)
.|.++|+++++.+... .. ......+.|||||++||+..... ...|.+++ .+...
T Consensus 98 ~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~--------------~~~v~viD-~t~~~--- 159 (373)
T 2mad_H 98 YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA--------------GPAVGLVV-QGGSS--- 159 (373)
T ss_pred eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC--------------CCeEEEEE-CCCCE---
Confidence 7899999987754321 11 11235789999999998875321 23688888 66532
Q ss_pred eEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccce--EEEEEecCCeE
Q psy4818 241 PVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH--HEIIANNGPEL 317 (734)
Q Consensus 241 ~v~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~--~~~~s~dg~~l 317 (734)
+.. .+- +. .+.+.|+|+..++.... ...+.++++ ++...... .......+.... ...++++++.+
T Consensus 160 -~~~~i~~-~~---~~~~~~~~~~~~~~~~~---dg~~~~vd~-~g~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~ 227 (373)
T 2mad_H 160 -DDQLLSS-PT---CYHIHPGAPSTFYLLCA---QGGLAKTDH-AGGAAGAG---LVGAMLTAAQNLLTQPAQANKSGRI 227 (373)
T ss_pred -EeEEcCC-Cc---eEEEEeCCCceEEEEcC---CCCEEEEEC-CCcEEEEE---eccccccCCcceeecceeEecCCEE
Confidence 222 111 11 13455666655443321 134556666 42110000 000000111111 12367788888
Q ss_pred EEEeCCCCCCceEEEEecCCCCCCCceE--eecCC-------CCceeEEEEE-eeCCEEEEEEEeC-------CceeEEE
Q psy4818 318 IVKTTKNAPKGKVVTINLNNPCEKNWKT--LIPED-------ENRTLDVVAA-VANNKLIVHYIQN-------VRSVMDL 380 (734)
Q Consensus 318 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~-------~~~~~~~~~~-~~~~~l~~~~~~~-------~~~~l~~ 380 (734)
+|.+.. ..++.+|+.+........ +.... +.. ...+.+ .+++++|+..... ....|.+
T Consensus 228 ~~~~~~----~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 228 VWPVYS----GKILQADISAAGATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred EEEcCC----ceEEEEeccCCcceEeeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 887642 369999987543110011 00000 000 111222 3446677655421 2357999
Q ss_pred EECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|+++++.++.|..+. ...++.+++|++.+++..+.. -..+.++|+
T Consensus 303 ID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~ 348 (373)
T 2mad_H 303 VTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAG--TEVLHIYDA 348 (373)
T ss_pred EECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCC--CCeEEEEEC
Confidence 9999999888886543 244777889998555554422 257999999
No 314
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.05 E-value=1.4e-08 Score=108.10 Aligned_cols=245 Identities=9% Similarity=0.037 Sum_probs=146.2
Q ss_pred EEEeeEEeCCC----C---cEEEEEEeCCCCceEEEEEEECCCCCc-----ccccc-c-----ccccCeeEEE----cCC
Q psy4818 142 TALKLYAFSDN----G---KHFAYCLSKSGSDWNTLHIKDVDTGKD-----YPEVL-K-----NVKFPSISWT----HDH 199 (734)
Q Consensus 142 ~~~~~~~~SPD----G---~~la~~~~~~g~~~~~l~v~dl~~g~~-----~~~~~-~-----~~~~~~~~wS----pDg 199 (734)
..+..+.|+|| | ++|+.... . ..|++||+.+++. +.... . ...+..+.|+ ||+
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 137 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSF-S----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 137 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEET-T----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----
T ss_pred CcEEEEEEecccccCCccccEEEEEcC-C----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC
Confidence 34788999999 9 88876553 2 3599999988874 32221 1 1334689999 999
Q ss_pred cE-EEEEEEecCCCCCCCCcccccCCcEEEEEECCC------CCCCC---eeEEec-----CCCCeeEEEEEEecCCcEE
Q psy4818 200 KG-FFYNQYCDINGTADGTETTAHMGQKIYYHVLGT------EQDKD---IPVVEF-----PNGRSLGLHSEVTDCGRYL 264 (734)
Q Consensus 200 ~~-l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t------~~~~~---~~v~~~-----~~~~~~~~~~~~SpDG~~l 264 (734)
+. |+....+. .|++|++.+ ..... ...+.. ..+......+.|+||| .|
T Consensus 138 ~~~l~~~~~dg----------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 138 SHRLVATDVKG----------------TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp CEEEEEEETTS----------------CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred ceEEEEEeCCC----------------cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 98 66655322 577777766 32211 002211 1122345678999999 65
Q ss_pred EEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec---c---ccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 265 LVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP---G---MDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 265 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~---~---~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
+... ....|++||+.++ .....+.. . ....... |+|+++.|+..+.. +....|..+|+.+
T Consensus 201 ~~~~----~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 201 ATGF----NNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEF 267 (397)
T ss_dssp EEEC----TTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTT
T ss_pred EEEe----CCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCCCCEEEEEecC-CCCceEEEEECCC
Confidence 5422 2368999999872 11222222 1 2223333 89999877765542 1125799999977
Q ss_pred CCCCCceEeecCC------------CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC------CC----
Q psy4818 338 PCEKNWKTLIPED------------ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP------LD---- 395 (734)
Q Consensus 338 ~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~------~~---- 395 (734)
+. ....+... ....+..+.+..++.++++...+ ..|++||+.+++.+..+. ..
T Consensus 268 ~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 268 GE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD--GKLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp CC---EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT--SEEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred Cc---ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC--CeEEEEEcCCCceeEEEecccCcccchhhh
Confidence 54 22223220 13345555565445666666555 479999998888777776 33
Q ss_pred -----------CceEEeeccCcccc---------eEEEEEecCCCCceEEEEeC
Q psy4818 396 -----------LGQITHISGRRKYN---------EVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 396 -----------~g~v~~~~~~~d~~---------~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+..+.+++++. .++++.+.. ..+..||+
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d---g~i~iw~~ 393 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD---RSIRWFRE 393 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT---TEEEEEEE
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecCC---CcEEEEEc
Confidence 55677888888873 455554443 46888887
No 315
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.05 E-value=6.2e-07 Score=99.49 Aligned_cols=323 Identities=14% Similarity=0.077 Sum_probs=172.0
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC-
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD- 176 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~- 176 (734)
.|.+.++|+.+... ..+++.+..++...--+... .....+.+||||+++..+ +.. ..|.++|+.
T Consensus 163 ~d~~~~~~V~~~~~---~~V~viD~~t~~v~~~i~~g-------~~p~~v~~SpDGr~lyv~-~~d----g~V~viD~~~ 227 (567)
T 1qks_A 163 WDLENLFSVTLRDA---GQIALIDGSTYEIKTVLDTG-------YAVHISRLSASGRYLFVI-GRD----GKVNMIDLWM 227 (567)
T ss_dssp CCGGGEEEEEETTT---TEEEEEETTTCCEEEEEECS-------SCEEEEEECTTSCEEEEE-ETT----SEEEEEETTS
T ss_pred cCCCceEEEEeCCC---CeEEEEECCCCeEEEEEeCC-------CCccceEECCCCCEEEEE-cCC----CeEEEEECCC
Confidence 44444566665442 23555554443322112211 124478999999987654 333 369999996
Q ss_pred -CCCcccccccccccCeeEEE----cCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecC----C
Q psy4818 177 -TGKDYPEVLKNVKFPSISWT----HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP----N 247 (734)
Q Consensus 177 -~g~~~~~~~~~~~~~~~~wS----pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~----~ 247 (734)
+++.+.....+....++++| |||+++|...... .+|.+++..+.... ...... +
T Consensus 228 ~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~---------------~~v~ViD~~t~~~~--~~i~~~~~~~~ 290 (567)
T 1qks_A 228 KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP---------------PQYVIMDGETLEPK--KIQSTRGMTYD 290 (567)
T ss_dssp SSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET---------------TEEEEEETTTCCEE--EEEECCEECTT
T ss_pred CCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccC---------------CeEEEEECCCCcEE--EEEeccccccc
Confidence 66654322222233578999 7999888776532 36777776654321 111110 0
Q ss_pred ------CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEe
Q psy4818 248 ------GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKT 321 (734)
Q Consensus 248 ------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 321 (734)
.+ ....+..|+++..+++.. .....|+++|..+.. .+ ....+-.+.......|++||+++++..
T Consensus 291 ~~~~~p~~-rva~i~~s~~~~~~vv~~---~~~g~v~~vd~~~~~--~~----~v~~i~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 291 EQEYHPEP-RVAAILASHYRPEFIVNV---KETGKILLVDYTDLN--NL----KTTEISAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp TCCEESCC-CEEEEEECSSSSEEEEEE---TTTTEEEEEETTCSS--EE----EEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred cccccCCC-ceEEEEEcCCCCEEEEEe---cCCCeEEEEecCCCc--cc----eeeeeeccccccCceECCCCCEEEEEe
Confidence 11 234677889988766654 233689999987621 10 011111111111113999999887765
Q ss_pred CCCCCCceEEEEecCCCCCCCceEeecC-C-CCceeEEEE-EeeCCEEEEEEEeCCceeEEEEECCC-------Cceeee
Q psy4818 322 TKNAPKGKVVTINLNNPCEKNWKTLIPE-D-ENRTLDVVA-AVANNKLIVHYIQNVRSVMDLHDLNT-------GKRLHS 391 (734)
Q Consensus 322 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~dl~~-------g~~~~~ 391 (734)
+. ..+|.++|+++++ ....++- . ..+.-.+.. ...+..-++....-+...|.++|..+ -+.++.
T Consensus 361 ~~---sn~V~ViD~~t~k---l~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~ 434 (567)
T 1qks_A 361 NA---RNKLVVIDTKEGK---LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp GG---GTEEEEEETTTTE---EEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred CC---CCeEEEEECCCCc---EEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEE
Confidence 53 3469999998765 3333332 1 111101221 23322334444444556799999876 345566
Q ss_pred eCCC-CceEEeeccCcccceEEEEEecCCCC-----ceEEEEeCCCCcCCCC-----CCceeEEeeccCCCCCCCCceEE
Q psy4818 392 FPLD-LGQITHISGRRKYNEVFYGFTSFLQP-----GTIYHCNIPENITDQD-----DFKPTIFRETIVPEFEPTLFQTK 460 (734)
Q Consensus 392 l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P-----~~~~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 460 (734)
+... .+.+ .+..+|+++.+++.. ...| ..+.++|+ ++. ....+.+.-.+..++....-.+.
T Consensus 435 i~~~g~g~~-~i~~~p~~~~l~v~~--~~~~~~~~~~~v~v~d~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 435 FPALGGGSL-FIKTHPNSQYLYVDA--TLNPEAEISGSVAVFDI-----KAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp EECSCSCCC-CEECCTTCSEEEEEC--TTCSSHHHHTCEEEEEG-----GGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred EecCCCCCE-EEEeCCCCCeEEEec--CCCCCcccCceEEEEEC-----CcccccccCCCcEEeccccccccCCCCcceE
Confidence 6544 3333 355689998888754 2233 37899998 332 10112221111112222233567
Q ss_pred EEEEEcCCCcEEeEEEE
Q psy4818 461 QVYFRSKDGTRVPMYII 477 (734)
Q Consensus 461 ~~~~~s~dg~~i~~~~~ 477 (734)
++.| +.||.++...+.
T Consensus 507 ~~~~-~~~G~~~~~s~~ 522 (567)
T 1qks_A 507 QGEF-NKDGTEVWFSVW 522 (567)
T ss_dssp EEEE-CTTSSEEEEEEE
T ss_pred eeeE-CCCCCEEEEEee
Confidence 7777 478887766644
No 316
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.05 E-value=3.2e-08 Score=104.24 Aligned_cols=245 Identities=11% Similarity=0.023 Sum_probs=145.1
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC--Cccccc-ccccccCeeEEEcC--CcEEEEEEEecCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--KDYPEV-LKNVKFPSISWTHD--HKGFFYNQYCDINGTAD 215 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g--~~~~~~-~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~~ 215 (734)
...+..++|||||++||.... + ..|++||+.++ +.+... .....+..+.|+|+ ++.|+....+.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------ 79 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSS-D----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------ 79 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------
T ss_pred cccEEEEEEcCCCCEEEEEEC-C----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC------
Confidence 345889999999999987653 2 35889998743 332211 12223467899988 88777665432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++.++.... +.....+...+..+.|+|+ |++|+.... ...|.+||+.++..
T Consensus 80 ----------~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~------ 137 (379)
T 3jrp_A 80 ----------KVLIWKEENGRWSQ--IAVHAVHSASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGT------ 137 (379)
T ss_dssp ----------CEEEEEEETTEEEE--EEEECCCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCTTSC------
T ss_pred ----------EEEEEEcCCCceeE--eeeecCCCcceEEEEeCCCCCCCEEEEecC----CCcEEEEecCCCCc------
Confidence 57888877653212 2222223345678999999 888876542 25899999987311
Q ss_pred CCceeeeccccceEEE-EEe-------------cCCeEEEEeCCCCCCceEEEEecCCCCCC-CceEeecCCCCceeEEE
Q psy4818 294 FPLKTVIPGMDHHHEI-IAN-------------NGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDVV 358 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~-------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~ 358 (734)
.....+.......... |+| +++.|+..+.. ..|..+|+.++... .....+... ...+..+
T Consensus 138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~ 212 (379)
T 3jrp_A 138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRDV 212 (379)
T ss_dssp CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT----SCEEEEEEETTTTEEEEEEEECCC-SSCEEEE
T ss_pred eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEecc-cCcEeEE
Confidence 1111222222223333 777 57766655543 35888888654310 011122222 3445566
Q ss_pred EEeeC---CEEEEEEEeCCceeEEEEECCCCc---eeeeeCC--CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 359 AAVAN---NKLIVHYIQNVRSVMDLHDLNTGK---RLHSFPL--DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 359 ~~~~~---~~l~~~~~~~~~~~l~~~dl~~g~---~~~~l~~--~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..+ +.++++...++ .|.+||+.+++ ....+.. ..+.+..+.+++++..++....+ ..++.|++
T Consensus 213 ~~sp~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----g~i~iw~~ 285 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD----NKVTLWKE 285 (379)
T ss_dssp EECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS----SSEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCC--EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC----CcEEEEeC
Confidence 66655 57777776664 68888887664 2222222 24567788899998766654432 35777777
No 317
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.05 E-value=1.7e-07 Score=96.61 Aligned_cols=236 Identities=11% Similarity=0.078 Sum_probs=141.2
Q ss_pred CcEEEeeEEeCCCC-cEEEEEEeCCCCceEEEEEEECCCCCc-----ccccc-cccccCeeEEEcCCcEEEEEEEecCCC
Q psy4818 140 GTTALKLYAFSDNG-KHFAYCLSKSGSDWNTLHIKDVDTGKD-----YPEVL-KNVKFPSISWTHDHKGFFYNQYCDING 212 (734)
Q Consensus 140 ~~~~~~~~~~SPDG-~~la~~~~~~g~~~~~l~v~dl~~g~~-----~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~ 212 (734)
+...+..++|||++ ++|+ +.... .+|++||+.+... +.... ....+..++|+|||+.|+-...+.
T Consensus 16 H~~~V~~l~~~~~~~~~l~-s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~--- 87 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLL-SASRD----KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK--- 87 (319)
T ss_dssp CSSCEEEEEECSSCTTEEE-EEETT----SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---
T ss_pred ccceEEEEEccCCCccEEE-EecCC----ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC---
Confidence 44457889999987 5555 43333 4799999865321 11111 111235789999999888766433
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
.|.+|++.++.. +..+. .+...+..+.|+|+|++|+-.. ....|.+||+.+.
T Consensus 88 -------------~v~~wd~~~~~~--~~~~~--~h~~~v~~~~~~~~~~~l~s~s----~D~~i~vwd~~~~------- 139 (319)
T 3frx_A 88 -------------TLRLWDVATGET--YQRFV--GHKSDVMSVDIDKKASMIISGS----RDKTIKVWTIKGQ------- 139 (319)
T ss_dssp -------------EEEEEETTTTEE--EEEEE--CCSSCEEEEEECTTSCEEEEEE----TTSCEEEEETTSC-------
T ss_pred -------------EEEEEECCCCCe--eEEEc--cCCCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCC-------
Confidence 789999887642 22232 2333567899999999887432 2257899998761
Q ss_pred CCCceeeeccccceEEE-EEec------CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCE
Q psy4818 293 KFPLKTVIPGMDHHHEI-IANN------GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNK 365 (734)
Q Consensus 293 ~~~~~~l~~~~~~~~~~-~s~d------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 365 (734)
....+.......... ++|. +..++-.+. +..|..+|+.+.. ....+... ...+..+.+..++.
T Consensus 140 --~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d~~i~~wd~~~~~---~~~~~~~h-~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 140 --CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN----DKMVKAWNLNQFQ---IEADFIGH-NSNINTLTASPDGT 209 (319)
T ss_dssp --EEEEECCCSSCEEEEEECCC------CCEEEEEET----TSCEEEEETTTTE---EEEEECCC-CSCEEEEEECTTSS
T ss_pred --eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC----CCEEEEEECCcch---hheeecCC-CCcEEEEEEcCCCC
Confidence 122222222222222 4443 334443332 3458889987654 22222222 33455565655567
Q ss_pred EEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 366 LIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++++...+ ..|++||+.+++.+..+... ..+..+.++|++..++.... ..+..+++
T Consensus 210 ~l~s~~~d--g~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~-----~~i~v~~~ 265 (319)
T 3frx_A 210 LIASAGKD--GEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATA-----TGIKVFSL 265 (319)
T ss_dssp EEEEEETT--CEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEET-----TEEEEEEE
T ss_pred EEEEEeCC--CeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcC-----CCcEEEEe
Confidence 77777666 47999999888877776543 45678888999876654432 24667776
No 318
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.04 E-value=4.5e-07 Score=92.86 Aligned_cols=266 Identities=10% Similarity=0.038 Sum_probs=154.3
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWT 196 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wS 196 (734)
+++-+...+....++... ++...+..++|||||++||-... ...|++||+++++.+....... .....++
T Consensus 47 V~iWd~~tg~~~~~~~~~----~~~~~V~~v~~~~~~~~l~sgs~-----Dg~v~iw~~~~~~~~~~~~~h~-~~~~~~~ 116 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQME----QPGEYISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQKRLRNMTSHS-ARVGSLS 116 (318)
T ss_dssp EEEEETTTCCEEEEEECC----STTCCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCS-SCEEEEE
T ss_pred EEEEECCCCCEEEEEEec----CCCCeEEEEEECCCCCEEEEEEC-----CCcEEEeecCCceeEEEecCcc-ceEEEee
Confidence 333344445544444322 22344889999999999986543 2479999999998654332222 2455778
Q ss_pred cCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCce
Q psy4818 197 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 276 (734)
Q Consensus 197 pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 276 (734)
++++.|+....+. .+..+...+... .+..+. .+........++++|++|+.... ...
T Consensus 117 ~~~~~l~s~~~~~----------------~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~l~s~~~----d~~ 173 (318)
T 4ggc_A 117 WNSYILSSGSRSG----------------HIHHHDVRVAEH-HVATLS--GHSQEVCGLRWAPDGRHLASGGN----DNL 173 (318)
T ss_dssp EETTEEEEEETTS----------------EEEEEETTSSSC-EEEEEE--CCSSCEEEEEECTTSSEEEEEET----TSC
T ss_pred cCCCEEEEEecCC----------------ceEeeecCCCce-eEEEEc--CccCceEEEEEcCCCCEEEEEec----Ccc
Confidence 8888766554321 455566554432 122222 22335567899999999874332 257
Q ss_pred EEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCcee
Q psy4818 277 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 355 (734)
Q Consensus 277 i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 355 (734)
|.+||+.++.... ............... .+++++..++..... .....|..++..... ........ ..+.
T Consensus 174 i~iwd~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~---~~~~~~~~-~~v~ 244 (318)
T 4ggc_A 174 VNVWPSAPGEGGW----VPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGA---CLSAVDAH-SQVC 244 (318)
T ss_dssp EEEEESSCBTTBS----CCSEEECCCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCC---EEEEEECS-SCEE
T ss_pred eeEEECCCCcccc----cceeeecccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEeccccc---ccccccce-eeee
Confidence 8999998742110 011111111112222 277777766654432 234568888887654 22222222 2333
Q ss_pred EEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 356 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.......++.+++.. ......|++||+.+++.+..+..+.+.|.++.++|+++.++ +.+.. ..+.+||+
T Consensus 245 ~~~~~~~~~~~~~~s-g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s~D---~~v~iWd~ 313 (318)
T 4ggc_A 245 SILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAAD---ETLRLWRC 313 (318)
T ss_dssp EEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETT---TEEEEECC
T ss_pred eeeecccccceEEEE-EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecC---CeEEEEEC
Confidence 333334434554433 22335799999999998888887777888999999987554 44433 36888888
No 319
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.03 E-value=9.2e-10 Score=110.50 Aligned_cols=101 Identities=11% Similarity=0.001 Sum_probs=66.3
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 564 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 564 (734)
.+..|.||++||+.+.... |.. +.. |. .||.|+.+|+||.+. + .....+++++.+.+..+++.-.
T Consensus 18 ~~~~~~lv~lhg~~~~~~~--~~~-~~~-l~-~~~~v~~~d~~G~~~-~---------~~~~~~~~~~~~~~~~~i~~~~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGSAFS--YAS-LPR-LK-SDTAVVGLNCPYARD-P---------ENMNCTHGAMIESFCNEIRRRQ 82 (265)
T ss_dssp TTSSEEEEEECCTTCCGGG--GTT-SCC-CS-SSEEEEEEECTTTTC-G---------GGCCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHH--HHH-HHh-cC-CCCEEEEEECCCCCC-C---------CCCCCCHHHHHHHHHHHHHHhC
Confidence 3556889999998765543 332 234 54 599999999999421 1 1122345555544433333211
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh---cCCCceeEEEEcCC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLN---QRPELYGAALILVG 601 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~---~~p~~~~a~v~~~~ 601 (734)
...++.++|||+||.++..++. .+|+.++.+|+..+
T Consensus 83 -~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~ 121 (265)
T 3ils_A 83 -PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDA 121 (265)
T ss_dssp -SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred -CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcC
Confidence 2247999999999999999987 67888888887654
No 320
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=3.1e-07 Score=95.71 Aligned_cols=287 Identities=16% Similarity=0.160 Sum_probs=151.7
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC-----CCCce
Q psy4818 93 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDW 167 (734)
Q Consensus 93 ~~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~-----~g~~~ 167 (734)
...|.|+|.++|-.-.........+++.+.......--+.. + .. - .+.+||||++|..+... .|...
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-----G-~~-P-~va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-----G-FL-P-NPVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-----C-SS-C-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-----C-CC-C-cEEECCCCCEEEEEcccccccccCCCC
Confidence 36677899888765432111113677777544332211211 1 11 1 38999999998766531 22234
Q ss_pred EEEEEEECCCCCccccc-cc-------ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCC
Q psy4818 168 NTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD 239 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~-~~-------~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~ 239 (734)
..|.++|+++++.+... .. +.....+.+||||+++|...... ...|.++++.+.....
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~--------------~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP--------------APAVGVVDLEGKAFKR 174 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS--------------SCEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC--------------CCeEEEEECCCCcEEE
Confidence 67999999999864322 11 11335789999999988764311 2368888887754211
Q ss_pred eeEEecCCCCeeE-----EEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEE-ec
Q psy4818 240 IPVVEFPNGRSLG-----LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIA-NN 313 (734)
Q Consensus 240 ~~v~~~~~~~~~~-----~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s-~d 313 (734)
....+.....+ ..+..++||+.+++...... .+- +..+ . +. ...-..+.. ...|. ++
T Consensus 175 --tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g---~v~--~~~~-~---~~-~~~~~~~~~-----~~~~~~~d 237 (386)
T 3sjl_D 175 --MLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG---TPE--ITHT-E---VF-HPEDEFLIN-----HPAYSQKA 237 (386)
T ss_dssp --EEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS---CCE--EEEC-C---CC-SCTTSCBCS-----CCEEETTT
T ss_pred --EEECCCcceeecCCCceeEEECCCCCEEEEECCCCC---eEE--Eeec-c---ee-ccccccccc-----cceeEcCC
Confidence 11111100000 01367788887766543211 110 1101 0 00 000000110 01244 45
Q ss_pred CCeEEEEeCCCCCCceEEEEecCCCCCCCceEe--e----------cCCCCceeEEEEEeeCCEEEEEEEeC-------C
Q psy4818 314 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL--I----------PEDENRTLDVVAAVANNKLIVHYIQN-------V 374 (734)
Q Consensus 314 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~----------~~~~~~~~~~~~~~~~~~l~~~~~~~-------~ 374 (734)
| +++|.+.. .+++.+|+.+........+ + ++. ...+ .+ ..+++++|+....+ .
T Consensus 238 G-~~~~vs~~----g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g-~q~~-a~-~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 238 G-RLVWPTYT----GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG-WQQV-AY-HRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp T-EEEEEBTT----SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS-SSCE-EE-ETTTTEEEEEEEECCTTCTTSC
T ss_pred C-cEEEEeCC----CEEEEEECCCCcceeecceeccccccccccccCCC-ccee-eE-CCCCCeEEEEeccccccccCCC
Confidence 5 56676662 4699999876531000111 1 111 1111 11 23457788876532 2
Q ss_pred ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+|+++|+++++.++.|..+. .+.++.+++|++.++|..+.. -..+..+|.
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~--~~~VsViD~ 361 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTG--DKTLYIHDA 361 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETT--TTEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCC--CCeEEEEEC
Confidence 3689999999999888887653 344677888987455444322 357999999
No 321
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.03 E-value=3.8e-08 Score=102.77 Aligned_cols=242 Identities=12% Similarity=0.064 Sum_probs=141.8
Q ss_pred EEeeEEeCCC---CcEEEEEEeCCCCceEEEEEEECCCCC-cccccc-cccccCee------EEEcCCcEEEEEEEecCC
Q psy4818 143 ALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVL-KNVKFPSI------SWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 143 ~~~~~~~SPD---G~~la~~~~~~g~~~~~l~v~dl~~g~-~~~~~~-~~~~~~~~------~wSpDg~~l~y~~~~~~~ 211 (734)
.+..++|||+ |++|+.... . ..|++||+.+++ .+.... .......+ +|+||++.|+....+.
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-- 139 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDF-G----GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG-- 139 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEET-T----SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS--
T ss_pred cEEEEEEcCCCCCCceEEEecC-C----CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC--
Confidence 4788999999 688876543 2 359999999887 332211 11122344 5689999887766432
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC--CeeEEEEE----EecCCcEEEEEEecCCCCceEEEEeCCCC
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSE----VTDCGRYLLVSTSNNTQGSDLHYFDLHSL 285 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~--~~~~~~~~----~SpDG~~l~~~~~~~~~~~~i~~~d~~~~ 285 (734)
.|.+|++.++... +..+..... ......+. |+|||++|+.... ...|++||+.++
T Consensus 140 --------------~i~vwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~ 200 (357)
T 3i2n_A 140 --------------TVKVWDPRQKDDP-VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNM 200 (357)
T ss_dssp --------------CEEEECTTSCSSC-SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTT
T ss_pred --------------eEEEEeCCCCCCc-ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccC
Confidence 6888888776422 222322111 11333444 8899999886432 258999999872
Q ss_pred CCCcccCCCCceeeeccccceEEE-EEe---cCCeEEEEeCCCCCCceEEEEecCCCCCCCceE--eecCCCCceeEEEE
Q psy4818 286 PDGKISGKFPLKTVIPGMDHHHEI-IAN---NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT--LIPEDENRTLDVVA 359 (734)
Q Consensus 286 ~~~~l~~~~~~~~l~~~~~~~~~~-~s~---dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~~~~~~~~~~ 359 (734)
. .............. |+| +++.++..+. +..|..+|+.++....... ..... ...+..+.
T Consensus 201 ~---------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~ 266 (357)
T 3i2n_A 201 A---------LRWETNIKNGVCSLEFDRKDISMNKLVATSL----EGKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVR 266 (357)
T ss_dssp E---------EEEEEECSSCEEEEEESCSSSSCCEEEEEES----TTEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEE
T ss_pred c---------eeeecCCCCceEEEEcCCCCCCCCEEEEECC----CCeEEEEeCcCCCcccceeeeccCCC-cCCEEEEE
Confidence 1 11222222223333 888 8887776554 3468888887643211111 01122 33455555
Q ss_pred EeeCCE-EEEEEEeCCceeEEEEECCCCc-------------------eeeeeCCCCceEEeeccCcccceEEEEEecCC
Q psy4818 360 AVANNK-LIVHYIQNVRSVMDLHDLNTGK-------------------RLHSFPLDLGQITHISGRRKYNEVFYGFTSFL 419 (734)
Q Consensus 360 ~~~~~~-l~~~~~~~~~~~l~~~dl~~g~-------------------~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~ 419 (734)
+..++. ++++...++ .|++||+.++. .+..+....+.+..+.+++++..++++.+..
T Consensus 267 ~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d- 343 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD- 343 (357)
T ss_dssp EETTEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT-
T ss_pred ECCCCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC-
Confidence 555444 677776664 68888875442 2333444456677888999988887665543
Q ss_pred CCceEEEEeC
Q psy4818 420 QPGTIYHCNI 429 (734)
Q Consensus 420 ~P~~~~~~d~ 429 (734)
..+.+||+
T Consensus 344 --~~i~iw~~ 351 (357)
T 3i2n_A 344 --QTVRVLIV 351 (357)
T ss_dssp --SEEEEEEE
T ss_pred --CcEEEEEC
Confidence 47888988
No 322
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.03 E-value=1.7e-09 Score=115.09 Aligned_cols=120 Identities=14% Similarity=0.042 Sum_probs=83.2
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHh------cCeEEEEEecccCCCCCchhhhccc
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH------FNGIYAIPNIRGGGELGEDWHNAGR 541 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~rG~~~~g~~~~~~~~ 541 (734)
+|..|+...+.++. +..|.||++||.+++... |... ...|.+ .||.|+++|+||.|.....
T Consensus 93 ~g~~i~~~~~~~~~----~~~~pllllHG~~~s~~~--~~~~-~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~------ 159 (408)
T 3g02_A 93 EGLTIHFAALFSER----EDAVPIALLHGWPGSFVE--FYPI-LQLFREEYTPETLPFHLVVPSLPGYTFSSGP------ 159 (408)
T ss_dssp TTEEEEEEEECCSC----TTCEEEEEECCSSCCGGG--GHHH-HHHHHHHCCTTTCCEEEEEECCTTSTTSCCS------
T ss_pred CCEEEEEEEecCCC----CCCCeEEEECCCCCcHHH--HHHH-HHHHhcccccccCceEEEEECCCCCCCCCCC------
Confidence 88888887765542 345778999999876543 4433 345554 5899999999995543211
Q ss_pred cccCCCchhHHHHHHHHHHHcCCCCCC-cEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKKYTKPK-YITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~~~d~~-ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.......++++...+..|+++ ...+ ++.++|+|+||+++..++.++|++...++..+++
T Consensus 160 ~~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 160 PLDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp CSSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 112245677777777776665 2333 8999999999999999999998876665554443
No 323
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=9.2e-08 Score=99.00 Aligned_cols=243 Identities=11% Similarity=0.072 Sum_probs=142.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.|+||++.+.|+-..+ ..|+++|.++++....... .....+.|+|||+.++ .. ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~-~~v~~i~~~~dg~l~v-~~-~~-------------- 109 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE----RELHELHLASGRKTVHALP-FMGSALAKISDSKQLI-AS-DD-------------- 109 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG----TEEEEEETTTTEEEEEECS-SCEEEEEEEETTEEEE-EE-TT--------------
T ss_pred CcCCeEeCCCCEEEEEECCC----CEEEEEECCCCcEEEEECC-CcceEEEEeCCCeEEE-EE-CC--------------
Confidence 45799999998888775433 3699999998874322222 2346789999997444 33 11
Q ss_pred CcEEEEEECCCCCCCCeeEEecCC--CCeeEEEEEEecCCcEEEEEEecCC---CCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPN--GRSLGLHSEVTDCGRYLLVSTSNNT---QGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpDG~~l~~~~~~~~---~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|++++..++.. ..+..... ......++.++|||+. ++...... ....||.++ ++ . ...
T Consensus 110 --gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~-~g-~---------~~~ 173 (326)
T 2ghs_A 110 --GLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA-KG-K---------VTK 173 (326)
T ss_dssp --EEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE-TT-E---------EEE
T ss_pred --CEEEEECCCCcE--EEEeeCCCCCCCCCCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe-CC-c---------EEE
Confidence 488888766532 12222111 1234567899999984 44332211 126899998 33 1 222
Q ss_pred eeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecC--CC-CCCCceEeecC-CCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 299 VIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN--NP-CEKNWKTLIPE-DENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 299 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
+......... .|++||+.+|+.... ..+|++++++ ++ .....+.+..- ........+.+..++.+++....+
T Consensus 174 ~~~~~~~~~~i~~s~dg~~lyv~~~~---~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 174 LFADISIPNSICFSPDGTTGYFVDTK---VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp EEEEESSEEEEEECTTSCEEEEEETT---TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred eeCCCcccCCeEEcCCCCEEEEEECC---CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 2222222222 389999999886543 3579999985 44 31111222211 112234455555546666655433
Q ss_pred CceeEEEEECCCCceeeeeCCCCceEEeeccC-cccceEEEEEecCCC----------CceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGR-RKYNEVFYGFTSFLQ----------PGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~-~d~~~l~~~~ss~~~----------P~~~~~~d~ 429 (734)
..|++++. +|+.++.+..+...+.++.++ ++++.++++...... .+.+|++++
T Consensus 251 --~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g~~~~~~~ 314 (326)
T 2ghs_A 251 --GAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTFELGI 314 (326)
T ss_dssp --TEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSS
T ss_pred --CEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCceEEEEeC
Confidence 47999998 688777777665556677776 777788877655432 145777765
No 324
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.02 E-value=4.8e-08 Score=104.34 Aligned_cols=242 Identities=11% Similarity=-0.006 Sum_probs=140.9
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC-Cc---ccc-cccccccCeeEEEc-CCcEEEEEEEecCCCCCCCCcc
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG-KD---YPE-VLKNVKFPSISWTH-DHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g-~~---~~~-~~~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~~ 219 (734)
.++++|+...++++...+ ..|+|||+... +. +.. ......+..++|+| |++.|+....+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~----g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg---------- 104 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGG----GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC---------- 104 (402)
T ss_dssp SEEECSSEEEEEBCCSSS----CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS----------
T ss_pred cEEECCCeEEEEEEEcCC----CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC----------
Confidence 467787776555433333 46999998653 21 111 11222346899999 888777665432
Q ss_pred cccCCcEEEEEECCCCCC-----CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~-----~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
.|.+|++.++.. +.+..+.. +...+..+.|+|+|+.++++... ...|.+||+.++.
T Consensus 105 ------~v~vw~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~-------- 165 (402)
T 2aq5_A 105 ------TVMVWEIPDGGLVLPLREPVITLEG--HTKRVGIVAWHPTAQNVLLSAGC---DNVILVWDVGTGA-------- 165 (402)
T ss_dssp ------EEEEEECCTTCCSSCBCSCSEEEEC--CSSCEEEEEECSSBTTEEEEEET---TSCEEEEETTTTE--------
T ss_pred ------eEEEEEccCCCCccccCCceEEecC--CCCeEEEEEECcCCCCEEEEEcC---CCEEEEEECCCCC--------
Confidence 688889887632 12233332 33456789999999544444432 2579999998731
Q ss_pred Cceee--eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEE
Q psy4818 295 PLKTV--IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 295 ~~~~l--~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 371 (734)
....+ .......... |+|+|+.|+..+. +..|..+|+.++.. ...+........+..+.+..++.+++...
T Consensus 166 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 239 (402)
T 2aq5_A 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIEPRKGTV--VAEKDRPHEGTRPVHAVFVSEGKILTTGF 239 (402)
T ss_dssp EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTEE--EEEEECSSCSSSCCEEEECSTTEEEEEEE
T ss_pred ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEeCCCCce--eeeeccCCCCCcceEEEEcCCCcEEEEec
Confidence 12222 1122223333 9999988876654 34699999987641 22221222222234444555466666552
Q ss_pred e-CCceeEEEEECCCCce-eeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 372 Q-NVRSVMDLHDLNTGKR-LHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 372 ~-~~~~~l~~~dl~~g~~-~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. .....|.+||+.+++. +...... ...+..+.++++++.++++.+.. ..+..||+
T Consensus 240 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d---g~i~i~d~ 297 (402)
T 2aq5_A 240 SRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD---SSIRYFEI 297 (402)
T ss_dssp CTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---SCEEEEEE
T ss_pred cCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---CeEEEEEe
Confidence 1 2336899999977654 2223222 34456778889988777665432 36888888
No 325
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=2.3e-07 Score=99.70 Aligned_cols=251 Identities=12% Similarity=0.108 Sum_probs=149.4
Q ss_pred EEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEcCCcEEEE
Q psy4818 128 EVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFY 204 (734)
Q Consensus 128 ~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSpDg~~l~y 204 (734)
..+||...+..+ +.+.-+.||+++ .||.+.+ .+|+|||+.+|+.+... .....+..++|||||+.|+.
T Consensus 94 ~~~l~ap~~~~d--~y~~~l~wS~~n-~lAvgld------~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las 164 (420)
T 4gga_A 94 DRILDAPEIRND--YYLNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 164 (420)
T ss_dssp SEEEECTTCCCC--TTCBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred ceEEECCCCccc--ccceeEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE
Confidence 456776655433 225668999865 7887763 37999999999864422 12223468999999998887
Q ss_pred EEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 205 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
...+. .|.+|++.++. .+.....+..... ++++|++.|+... ....++++|...
T Consensus 165 gs~Dg----------------~v~iWd~~~~~----~~~~~~~h~~~v~--~~s~~~~~l~sgs----~d~~i~~~d~~~ 218 (420)
T 4gga_A 165 GTSSA----------------EVQLWDVQQQK----RLRNMTSHSARVG--SLSWNSYILSSGS----RSGHIHHHDVRV 218 (420)
T ss_dssp EETTS----------------CEEEEETTTTE----EEEEECCCSSCEE--EEEEETTEEEEEE----TTSEEEEEETTS
T ss_pred EECCC----------------eEEEEEcCCCc----EEEEEeCCCCceE--EEeeCCCEEEEEe----CCCceeEeeecc
Confidence 66433 68888887653 2332223333333 4556777766322 226788899876
Q ss_pred CCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCC--CceEeecCCCCceeEEEEE-
Q psy4818 285 LPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK--NWKTLIPEDENRTLDVVAA- 360 (734)
Q Consensus 285 ~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~~~~~~~~~~- 360 (734)
. . .....+......... .|+++|+.++..++. ..+..++..++... .......+ ...+....+
T Consensus 219 ~-~------~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D----~~v~i~~~~~~~~~~~~~~~~~~~--~~~V~~~~~~ 285 (420)
T 4gga_A 219 A-E------HHVATLSGHSQEVCGLRWAPDGRHLASGGND----NLVNVWPSAPGEGGWVPLQTFTQH--QGAVKAVAWC 285 (420)
T ss_dssp S-S------CEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEESSCCSSCSCCSEEECCC--SSCEEEEEEC
T ss_pred c-c------eeeEEecccccceeeeeecCCCCeeeeeecc----ccceEEeeccccccceeeeeeccc--CCceeeeeeC
Confidence 2 1 112222222233333 388999887766553 35888888764321 11222222 233344433
Q ss_pred eeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 361 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 361 ~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+..+++.........|.+||+.+|+....+.... .+..+.++++++.++....+. -..+++||+
T Consensus 286 p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~--d~~I~iwd~ 351 (420)
T 4gga_A 286 PWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFA--QNQLVIWKY 351 (420)
T ss_dssp TTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTT--TCCEEEEET
T ss_pred CCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecC--CCEEEEEEC
Confidence 333556655543333579999999998777665443 344667778888776654322 246899998
No 326
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.01 E-value=3.3e-08 Score=113.92 Aligned_cols=239 Identities=13% Similarity=0.090 Sum_probs=143.6
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++|+-... ...|++||+.+++.+.... ....+..++|||||+.|+-.+.+.
T Consensus 430 ~~~v~~v~~s~~g~~l~sgs~-----Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~---------- 494 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQFALSGSW-----DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR---------- 494 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS----------
T ss_pred CCcEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC----------
Confidence 345788999999999885543 2479999999987543222 222346889999999888766433
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEe-cCCCCeeEEEEEEecCCc-EEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGR-YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~-~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|.+|++.+.. ...+.. ...+...+..+.|+|++. .++++.+. ...|.+||+.++. ...
T Consensus 495 ------~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~---d~~v~vwd~~~~~--------~~~ 555 (694)
T 3dm0_A 495 ------TIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW---DKTVKVWNLSNCK--------LRS 555 (694)
T ss_dssp ------CEEEECTTSCE--EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTCC--------EEE
T ss_pred ------EEEEEECCCCc--ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC---CCeEEEEECCCCc--------EEE
Confidence 57777764321 111111 112334577899999984 23333322 2579999998721 112
Q ss_pred eeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 298 TVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 298 ~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
.+..+....... |+|||+.|+..+. +..|.+||+.++. .+..-.....+..+.+..++.+++....+
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--- 623 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEGK-----KLYSLEANSVIHALCFSPNRYWLCAATEH--- 623 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTTE-----EEECCBCSSCEEEEEECSSSSEEEEEETT---
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCc-----eEEEecCCCcEEEEEEcCCCcEEEEEcCC---
Confidence 222222333333 9999987765443 3458889997754 22221123345556666546666555433
Q ss_pred eEEEEECCCCceeeeeCCCC-------------------ceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 377 VMDLHDLNTGKRLHSFPLDL-------------------GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l~~~~-------------------g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.|++||+.+++.++.+.... ..+.++.++++++.|+ +.+.. ..+.++|+
T Consensus 624 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~-sgs~D---g~i~iW~i 691 (694)
T 3dm0_A 624 GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF-SGYTD---GVIRVWGI 691 (694)
T ss_dssp EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEE-EEETT---SEEEEEEC
T ss_pred CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEE-EEcCC---CeEEEEec
Confidence 49999998887665553210 1245677888887654 33332 36788877
No 327
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=99.01 E-value=1.2e-10 Score=128.78 Aligned_cols=126 Identities=16% Similarity=0.117 Sum_probs=85.6
Q ss_pred EEeEEEEEe-----ccccCCCC----CcEEEEecCCCCCcCC---ccccHHHHHHHHhcCeEEEEEecccCC-CCCchhh
Q psy4818 471 RVPMYIIHR-----VGALRNRR----NPVIIYGYGGYGVSVL---PTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWH 537 (734)
Q Consensus 471 ~i~~~~~~p-----~~~~~~~~----~P~vv~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~ 537 (734)
.+.+.++.| ... ..++ .|+||++|||...... ..+.. ..|+++|++|+.+|||.+. ||...
T Consensus 90 cL~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~l~~~g~vvv~~nYRl~~~Gf~~~-- 163 (551)
T 2fj0_A 90 CIHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGP---EYLVSKDVIVITFNYRLNVYGFLSL-- 163 (551)
T ss_dssp CCEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBC---TTGGGGSCEEEEECCCCHHHHHCCC--
T ss_pred CeEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCH---HHHHhCCeEEEEeCCcCCccccccC--
Confidence 356777788 321 2234 8999999998533222 22322 3455679999999999642 22111
Q ss_pred hccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCcc
Q psy4818 538 NAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGAL 603 (734)
Q Consensus 538 ~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~ 603 (734)
......+...+.|+.++++|+.++- -.||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 -~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 -NSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp -SSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred -cccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 0001123345899999999998762 2699999999999999999998875 467899999999864
No 328
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.01 E-value=9.7e-08 Score=107.90 Aligned_cols=274 Identities=9% Similarity=0.065 Sum_probs=161.5
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCC----CeEEEeCCCCcCCCCcEE-EeeEEeCC--CCcEEEEEEeCCCCce
Q psy4818 95 APQRQENNYFYFHNKGLQNHSILYVQRNLTG----STEVFLDPNKLSKDGTTA-LKLYAFSD--NGKHFAYCLSKSGSDW 167 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g----~~~~l~d~~~~~~~~~~~-~~~~~~SP--DG~~la~~~~~~g~~~ 167 (734)
...++|.++++.. ...-.+|-.. ++ .....+. ++... +..++||| ||++||.... .
T Consensus 25 ~~spdg~~l~~~~----~~~v~v~~~~--~~~~~~~~~~~~~------~h~~~~v~~~~~sp~~~~~~l~s~~~-d---- 87 (615)
T 1pgu_A 25 SYDPTTNAIAYPC----GKSAFVRCLD--DGDSKVPPVVQFT------GHGSSVVTTVKFSPIKGSQYLCSGDE-S---- 87 (615)
T ss_dssp EEETTTTEEEEEE----TTEEEEEECC--SSCCSSCSEEEEC------TTTTSCEEEEEECSSTTCCEEEEEET-T----
T ss_pred EECCCCCEEEEec----CCeEEEEECC--CCCCccccceEEe------cCCCceEEEEEECcCCCCCEEEEecC-C----
Confidence 3457888888765 2234445433 33 2233332 22345 78999999 9999987654 2
Q ss_pred EEEEEEECCCC--------Ccccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC
Q psy4818 168 NTLHIKDVDTG--------KDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK 238 (734)
Q Consensus 168 ~~l~v~dl~~g--------~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~ 238 (734)
..|++||+.++ +.+.. ......+..++|+|||+.|+....+. .....|++++.+.
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~------------~~~~~v~~~d~~~---- 151 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR------------DNFGVFISWDSGN---- 151 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS------------SCSEEEEETTTCC----
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC------------CCccEEEEEECCC----
Confidence 36999999765 22211 11222346889999999998877532 1223677766321
Q ss_pred CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc---ceEEE-EEec-
Q psy4818 239 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD---HHHEI-IANN- 313 (734)
Q Consensus 239 ~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~---~~~~~-~s~d- 313 (734)
.+.....+...+..+.|+|||++++++... ...|.+||+.++ .....+..... ..... |+|+
T Consensus 152 --~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 152 --SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPF--------KFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp --EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTB--------EEEEEECSSSCTTCCEEEEEECSTT
T ss_pred --cceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCc--------ceeeeecccCCCCceEEEEEECCCC
Confidence 222323344467789999999965555433 268999998772 11122222222 23333 9999
Q ss_pred CCeEEEEeCCCCCCceEEEEecCCCCCCCceEee-cC--CCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceee
Q psy4818 314 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI-PE--DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH 390 (734)
Q Consensus 314 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~ 390 (734)
|+.|+..+.. ..|..+|+.++. ....+ .. .....+..+.+. ++..+++...+ ..|.+||+.+++.+.
T Consensus 219 ~~~l~~~~~d----g~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d--~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 219 GEFVITVGSD----RKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD--ATIRVWDVTTSKCVQ 288 (615)
T ss_dssp CCEEEEEETT----CCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT--SEEEEEETTTTEEEE
T ss_pred CCEEEEEeCC----CeEEEEECCCCC---EeEEecccccccCCceEEEEEc-CCCEEEEEcCC--CcEEEEECCCCcEEE
Confidence 8877765543 459999997765 23333 20 223445555555 46666666555 479999998888776
Q ss_pred eeCCC----CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 391 SFPLD----LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 391 ~l~~~----~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..+ ...+..+.+. +++.++.. +. -..++.||+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~-~~---~g~i~~~d~ 326 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVAT-GNGRIISL-SL---DGTLNFYEL 326 (615)
T ss_dssp EEECCTTCGGGCEEEEEEE-ETTEEEEE-ET---TSCEEEEET
T ss_pred EEcCCCCcccCceeEEEeC-CCCeEEEE-EC---CCCEEEEEC
Confidence 66543 2334344443 55555443 33 246888888
No 329
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.01 E-value=3.1e-08 Score=100.96 Aligned_cols=233 Identities=9% Similarity=-0.010 Sum_probs=135.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.|+|||+.|+++....+ .|+++|.+++ ............+++++|||+ |+.+.. .
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~----~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~---------------~ 88 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQN----RTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH-LIACSH---------------G 88 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT----EEEEEETTSC-EEEEESSCSSEEEEEECTTCC-EEEEET---------------T
T ss_pred ccCCeEeCCCCEEEEEeCCCC----EEEEEECCCC-eEEEECCCCCcceeeECCCCc-EEEEec---------------C
Confidence 568999999998777665443 6999999988 322222222235789999997 444332 1
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCC--eeEEEEEEecCCcEEEEEEec-C-------------CCCceEEEEeCCCCCC
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGR--SLGLHSEVTDCGRYLLVSTSN-N-------------TQGSDLHYFDLHSLPD 287 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~--~~~~~~~~SpDG~~l~~~~~~-~-------------~~~~~i~~~d~~~~~~ 287 (734)
...|++++..++... .+....... ....++.++|||+.+ ++... + .....||.++.++ .
T Consensus 89 ~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~i~~d~~G~l~-vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g-~- 163 (296)
T 3e5z_A 89 LRRLERQREPGGEWE--SIADSFEGKKLNSPNDVCLAPDGSLW-FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG-T- 163 (296)
T ss_dssp TTEEEEECSTTCCEE--EEECEETTEECCCCCCEEECTTSCEE-EEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-C-
T ss_pred CCeEEEEcCCCCcEE--EEeeccCCCCCCCCCCEEECCCCCEE-EECCccccccccccccccccCCCcEEEEECCCC-C-
Confidence 236888887655321 121111111 012357899999844 33210 0 0124789888763 1
Q ss_pred CcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecC-CCCCCCc---eEeecCCCCceeEEEEEee
Q psy4818 288 GKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN-NPCEKNW---KTLIPEDENRTLDVVAAVA 362 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~---~~l~~~~~~~~~~~~~~~~ 362 (734)
...+......... .|+|||+.+ +.... ..+|++++++ ++. + ..++ .........+.+..
T Consensus 164 --------~~~~~~~~~~~~gi~~s~dg~~l-v~~~~---~~~i~~~~~~~~g~---~~~~~~~~-~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 164 --------LSAPIRDRVKPNGLAFLPSGNLL-VSDTG---DNATHRYCLNARGE---TEYQGVHF-TVEPGKTDGLRVDA 227 (296)
T ss_dssp --------EEEEECCCSSEEEEEECTTSCEE-EEETT---TTEEEEEEECSSSC---EEEEEEEE-CCSSSCCCSEEEBT
T ss_pred --------EEEeecCCCCCccEEECCCCCEE-EEeCC---CCeEEEEEECCCCc---CcCCCeEe-eCCCCCCCeEEECC
Confidence 2222222222222 389999877 54332 3469999986 332 2 2333 22122223444555
Q ss_pred CCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeecc-CcccceEEEEEecCCCCceEEEEeC
Q psy4818 363 NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 363 ~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~-~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.+++.. + ..|++|+. +|+.+..+..+.+ +.++.+ +++++.|+++... .+|++++
T Consensus 228 ~G~l~v~~--~--~~v~~~~~-~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~ 284 (296)
T 3e5z_A 228 GGLIWASA--G--DGVHVLTP-DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIET 284 (296)
T ss_dssp TSCEEEEE--T--TEEEEECT-TSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEEC
T ss_pred CCCEEEEc--C--CeEEEECC-CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEc
Confidence 56777666 2 47999998 5887777776654 555555 5777788876542 7999998
No 330
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.00 E-value=2.1e-08 Score=104.76 Aligned_cols=243 Identities=8% Similarity=0.048 Sum_probs=144.2
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc--ccccccCeeEEEcC---CcEEEEEEEecCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LKNVKFPSISWTHD---HKGFFYNQYCDINGTADG 216 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~--~~~~~~~~~~wSpD---g~~l~y~~~~~~~~~~~~ 216 (734)
..+..++|||||++++.+.... .+...|++||+.+++..... .....+..+.|+|| |+.|+....+.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg------- 90 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG------- 90 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS-------
T ss_pred CceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC-------
Confidence 3478999999998877665431 11368999999998753321 12223468899999 57776665332
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEE------EEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS------EVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~------~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
.|.+|++.+... .+..+.. +...+..+ +|+|||++|+.... ...|.+||+.++..
T Consensus 91 ---------~i~iwd~~~~~~-~~~~~~~--~~~~v~~~~~~~~~~~s~~~~~l~~~~~----d~~i~vwd~~~~~~--- 151 (357)
T 3i2n_A 91 ---------NLHIWNLEAPEM-PVYSVKG--HKEIINAIDGIGGLGIGEGAPEIVTGSR----DGTVKVWDPRQKDD--- 151 (357)
T ss_dssp ---------CEEEECTTSCSS-CSEEECC--CSSCEEEEEEESGGGCC-CCCEEEEEET----TSCEEEECTTSCSS---
T ss_pred ---------eEEEEeCCCCCc-cEEEEEe--cccceEEEeeccccccCCCccEEEEEeC----CCeEEEEeCCCCCC---
Confidence 688888887642 2223332 22234455 46899999875432 25799999987321
Q ss_pred cCCCCceeeecccc----ceEEE-----EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe
Q psy4818 291 SGKFPLKTVIPGMD----HHHEI-----IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV 361 (734)
Q Consensus 291 ~~~~~~~~l~~~~~----~~~~~-----~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 361 (734)
....+..... ..... |+++++.++..+. +..|..+|+.++. ....... ...+..+.+.
T Consensus 152 ----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~---~~~~~~~--~~~v~~~~~~ 218 (357)
T 3i2n_A 152 ----PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNMA---LRWETNI--KNGVCSLEFD 218 (357)
T ss_dssp ----CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTTE---EEEEEEC--SSCEEEEEES
T ss_pred ----cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccCc---eeeecCC--CCceEEEEcC
Confidence 1222211111 11111 5688887776554 3469999998765 2222222 2344555555
Q ss_pred e---CCEEEEEEEeCCceeEEEEECCCCceeeeeC-----CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 A---NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-----LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~---~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~-----~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. ++..+++...+ ..|++||+.+++....+. ...+.+..+.+++++..++++.+.. ..+..||+
T Consensus 219 ~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~ 289 (357)
T 3i2n_A 219 RKDISMNKLVATSLE--GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA---GGLHLWKY 289 (357)
T ss_dssp CSSSSCCEEEEEEST--TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---SEEEEEEE
T ss_pred CCCCCCCEEEEECCC--CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC---CcEEEeec
Confidence 3 35555555555 478889886655433332 4456677888889887566655543 36888888
No 331
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.00 E-value=3.2e-08 Score=105.76 Aligned_cols=245 Identities=10% Similarity=0.049 Sum_probs=141.0
Q ss_pred CcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCc-------ccc-cccccccCeeEEEcCCcEEEEEEEecC
Q psy4818 140 GTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKD-------YPE-VLKNVKFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 140 ~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~-------~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
+...+..++||| |+++||.... + ..|++||+.++.. +.. ......+..+.|+|||+.++++...+
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~-d----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d- 153 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSE-D----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD- 153 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEET-T----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-
T ss_pred CCCCEEEEEeCCCCCCEEEEEeC-C----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-
Confidence 445688999999 8998886553 2 4799999998742 211 11222346799999996455554321
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcc
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 290 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l 290 (734)
..|++|++.++. .+..+....+...+..+.|+|||++|+.... ...|++||+.++.
T Consensus 154 --------------g~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~---- 209 (402)
T 2aq5_A 154 --------------NVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIEPRKGT---- 209 (402)
T ss_dssp --------------SCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTE----
T ss_pred --------------CEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEeCCCCc----
Confidence 268899988653 2222210233446678999999999886432 2689999998731
Q ss_pred cCCCCceee-eccccc-eEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEE
Q psy4818 291 SGKFPLKTV-IPGMDH-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKL 366 (734)
Q Consensus 291 ~~~~~~~~l-~~~~~~-~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l 366 (734)
....+ ...... ... .|+++|+.|+.... ...+..|..+|+.+... ............ +..+.+. +++.+
T Consensus 210 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-v~~~~~s~~~~~l 282 (402)
T 2aq5_A 210 ----VVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLEE-PLSLQELDTSSG-VLLPFFDPDTNIV 282 (402)
T ss_dssp ----EEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCSS-CSEEEECCCCSS-CEEEEEETTTTEE
T ss_pred ----eeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCccccC-CceEEeccCCCc-eeEEEEcCCCCEE
Confidence 12222 111111 222 48998775554322 12356799999976542 112222122123 3344444 43455
Q ss_pred EEEEEeCCceeEEEEECCCCce-eeeeCC--CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 367 IVHYIQNVRSVMDLHDLNTGKR-LHSFPL--DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 367 ~~~~~~~~~~~l~~~dl~~g~~-~~~l~~--~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++....+ ..|++|++.+++. +..+.. ..+.+.++.+++++..++ ++. ..+..|++
T Consensus 283 ~~~g~~d--g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~---s~~---~~~~~~~l 340 (402)
T 2aq5_A 283 YLCGKGD--SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV---NKC---EIARFYKL 340 (402)
T ss_dssp EEEETTC--SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG---GGT---EEEEEEEE
T ss_pred EEEEcCC--CeEEEEEecCCCcceEeecccccCCcccceEEecccccce---ecc---eeEEEEEc
Confidence 5554344 4788999977762 333322 134566777888875443 121 25666776
No 332
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.00 E-value=8.3e-07 Score=93.18 Aligned_cols=287 Identities=14% Similarity=0.063 Sum_probs=150.9
Q ss_pred CcEEeCCeEEEEEEcCCCC--eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEe-----CCCCce
Q psy4818 95 APQRQENNYFYFHNKGLQN--HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS-----KSGSDW 167 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~-----~~g~~~ 167 (734)
.|.+++.++| ..+.+... -..+++.+...+....-+.. +.. - .+.+||||++|+.+.. ..|...
T Consensus 10 ~~~~~~~~~y-v~~~~~~~~~d~~v~v~D~~t~~~~~~i~~------g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~ 80 (361)
T 2oiz_A 10 VSAPQENRIY-VMDSVFMHLTESRVHVYDYTNGKFLGMVPT------AFN-G-HVQVSNDGKKIYTMTTYHERITRGKRS 80 (361)
T ss_dssp CSSCGGGEEE-EEECCGGGGGGCEEEEEETTTCCEEEEEEC------CEE-E-EEEECTTSSEEEEEEEEETTSSSSCEE
T ss_pred cCCCCCCEEE-EECCCCCccccCeEEEEECCCCeEEEEecC------CCC-C-ceEECCCCCEEEEEEecccccccCCCC
Confidence 3445666654 44432111 12577777554443222221 222 3 7899999998876653 133345
Q ss_pred EEEEEEECCCCCccccc-cc------ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCe
Q psy4818 168 NTLHIKDVDTGKDYPEV-LK------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 240 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~-~~------~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~ 240 (734)
..|.++|+++++.+... .. +.....+++||||++||...... ...|.++++.+..
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~--------------~~~v~v~d~~~~~---- 142 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP--------------ATSIGIVDVAKGD---- 142 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS--------------SEEEEEEETTTTE----
T ss_pred CEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC--------------CCeEEEEECCCCc----
Confidence 67999999988754321 11 12235789999999887765421 2368888887652
Q ss_pred eEEe-cCCCCee---------EEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEEE
Q psy4818 241 PVVE-FPNGRSL---------GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHEI 309 (734)
Q Consensus 241 ~v~~-~~~~~~~---------~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~~ 309 (734)
.+.. .+-...+ ...+..++||+.+++..... . ..+....... .+. +.......
T Consensus 143 ~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~-g-~~~~~~~~~~--------------~~~~~~~~~~~~ 206 (361)
T 2oiz_A 143 YVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGED-G-KVASQSRSKQ--------------MFSVKDDPIFIA 206 (361)
T ss_dssp EEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTT-S-SEEEEEECCC--------------CSCTTTSCBCSC
T ss_pred EEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCC-C-cEeeeccccc--------------eEcCCCCceEEE
Confidence 2222 1111100 01134455555444432211 1 1111111000 000 00111111
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee-------------cCCCCceeEEEEEeeCCEEEEEEEeCC--
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI-------------PEDENRTLDVVAAVANNKLIVHYIQNV-- 374 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 374 (734)
.+++++.+++.+.. .+++.+|+.+.... ....+ +.. ...+ ....+++++|+....++
T Consensus 207 ~~~~g~~~~~~~~~----~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~p~g-~~~~--a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 207 PALDKDKAHFVSYY----GNVYSADFSGDEVK-VDGPWSLLNDEDKAKNWVPGG-YNLV--GLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp CEECSSEEEEEBTT----SEEEEEECSSSSCE-EEEEEESCCHHHHHTTCEECC-SSCE--EEETTTTEEEEEEESSCCT
T ss_pred ecccCCEEEEEeCC----CeEEEEEecCCCce-ecccccccCccccccccccCC-eeEE--EEecCCCeEEEEEccCCCc
Confidence 46888888877642 36999998654310 00100 010 0111 22334467777654222
Q ss_pred ------ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeCCCCcCCCCCCceeEEee
Q psy4818 375 ------RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 446 (734)
Q Consensus 375 ------~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~ 446 (734)
...|++||+++++.+..+..+. ..++.+++|++.++.+ +. ..+.++|+ +++ .++++..
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~-n~----~~v~v~D~-----~t~--~l~~~~~ 342 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTL-DG----GNVNVYDI-----SQP--EPKLLRT 342 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEE-CS----SCEEEEEC-----SSS--SCEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEe-CC----CeEEEEEC-----CCC--cceeeEE
Confidence 3489999999999888887654 5678888999866543 32 68999999 566 3344444
No 333
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.99 E-value=2.7e-07 Score=98.48 Aligned_cols=235 Identities=12% Similarity=0.092 Sum_probs=142.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
+..+.||++ ..++.+. + ..|++||+.+|+...... ....+..++|+|||+.|+....+.
T Consensus 96 ~~~~~~s~~-~l~~~~~--d----~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg------------ 156 (401)
T 4aez_A 96 LNLLDWSNL-NVVAVAL--E----RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG------------ 156 (401)
T ss_dssp CBCEEECTT-SEEEEEE--T----TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS------------
T ss_pred EEEEeecCC-CEEEEEC--C----CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC------------
Confidence 455788863 3444332 2 369999999998643222 122346899999999888776432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.|.+|++.++. .+..+. .+...+..+.| +++.|+... ....|++||+.... .....+..
T Consensus 157 ----~i~iwd~~~~~--~~~~~~--~~~~~v~~~~~--~~~~l~~~~----~dg~i~i~d~~~~~-------~~~~~~~~ 215 (401)
T 4aez_A 157 ----LVDIYDVESQT--KLRTMA--GHQARVGCLSW--NRHVLSSGS----RSGAIHHHDVRIAN-------HQIGTLQG 215 (401)
T ss_dssp ----CEEEEETTTCC--EEEEEC--CCSSCEEEEEE--ETTEEEEEE----TTSEEEEEETTSSS-------CEEEEEEC
T ss_pred ----eEEEEECcCCe--EEEEec--CCCCceEEEEE--CCCEEEEEc----CCCCEEEEecccCc-------ceeeEEcC
Confidence 68888887653 222222 23334566777 566666432 22689999998511 11222323
Q ss_pred cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCEEEEEEEeCCceeEE
Q psy4818 302 GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 302 ~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~ 379 (734)
........ |+|+++.|+..+.. ..|..+|+.++. ....+... ...+..+.+.. +..++++........|+
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~---~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGND----NVVQIWDARSSI---PKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT----SCEEEEETTCSS---EEEEECCC-SSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CCCCeeEEEEcCCCCEEEEEeCC----CeEEEccCCCCC---ccEEecCC-cceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 33333333 89998877765543 359999998754 22222222 23344555543 45666665422235799
Q ss_pred EEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 380 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 380 ~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+||+.+++.+..+.. ...+..+.+++++..++....+. -..+.+||+
T Consensus 288 i~d~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~g~~--dg~i~v~~~ 334 (401)
T 4aez_A 288 FWNAATGARVNTVDA-GSQVTSLIWSPHSKEIMSTHGFP--DNNLSIWSY 334 (401)
T ss_dssp EEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEECTT--TCEEEEEEE
T ss_pred EEECCCCCEEEEEeC-CCcEEEEEECCCCCeEEEEeecC--CCcEEEEec
Confidence 999988887777753 34577888999988776654222 357888988
No 334
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.99 E-value=5.6e-08 Score=119.93 Aligned_cols=244 Identities=14% Similarity=0.123 Sum_probs=145.2
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..++|||||++||.... + ..|.+||+.+++.+.... ....+..++|||||+.|+....+.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~-d----~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~---------- 679 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGA-D----KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK---------- 679 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred cccEEEEEECCCCCEEEEEeC-C----CeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCC----------
Confidence 345888999999999986643 2 369999999998643222 222346899999999888766432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|.+|++.++. .+..+.. +...+..+.|+|++...++.+.. ....|.+||+.++. ....+
T Consensus 680 ------~v~vwd~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~--~d~~v~vwd~~~~~--------~~~~~ 739 (1249)
T 3sfz_A 680 ------KVKIWDSATGK--LVHTYDE--HSEQVNCCHFTNKSNHLLLATGS--NDFFLKLWDLNQKE--------CRNTM 739 (1249)
T ss_dssp ------EEEEEETTTCC--EEEEEEC--CSSCEEEEEECSSSSCCEEEEEE--TTSCEEEEETTSSS--------EEEEE
T ss_pred ------eEEEEECCCCc--eEEEEcC--CCCcEEEEEEecCCCceEEEEEe--CCCeEEEEECCCcc--------hhhee
Confidence 69999998764 2223332 34456789999976543333222 22579999998732 11222
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC-------------------------------------
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK------------------------------------- 341 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~------------------------------------- 341 (734)
.......... |+|+|+.++..+.. +.|..||+.++...
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 815 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSAD----GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIV 815 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESS----SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEE
T ss_pred cCCCCCEEEEEEecCCCEEEEEECC----CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEE
Confidence 2222222232 77877766654432 34666665432100
Q ss_pred --------------CceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcc
Q psy4818 342 --------------NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRK 407 (734)
Q Consensus 342 --------------~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d 407 (734)
.....+.......+..+.+..++.++++...+ ..+.+|++.+++.+..+....+.+.++.++++
T Consensus 816 ~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 816 AAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ--YCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS--SCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 00000110111222233333334555555444 46899999888877777766777888999998
Q ss_pred cceEEEEEecCCCCceEEEEeC
Q psy4818 408 YNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 408 ~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.++.. +.. ..+..||+
T Consensus 894 g~~l~s~-s~d---g~v~vw~~ 911 (1249)
T 3sfz_A 894 GSSFLTA-SDD---QTIRVWET 911 (1249)
T ss_dssp SSEEEEE-ETT---SCEEEEEH
T ss_pred CCEEEEE-eCC---CeEEEEEc
Confidence 8765543 332 35777776
No 335
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.97 E-value=6.5e-08 Score=100.40 Aligned_cols=245 Identities=10% Similarity=0.008 Sum_probs=141.2
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC----cccccccccccCeeEEEcCCc-EEEEEEEecCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVLKNVKFPSISWTHDHK-GFFYNQYCDINGTAD 215 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~----~~~~~~~~~~~~~~~wSpDg~-~l~y~~~~~~~~~~~ 215 (734)
...+..++|||||++|+.+... ..|++||+.+++ ..........+..++|+||++ .|+....+.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------ 79 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG------ 79 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS------
T ss_pred CCcEEEEEEcCCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC------
Confidence 3458899999999999876532 369999998876 322222222346899999999 777766432
Q ss_pred CCcccccCCcEEEEEEC-CCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC-C
Q psy4818 216 GTETTAHMGQKIYYHVL-GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG-K 293 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l-~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~ 293 (734)
.|++|++ .+... ..+....+...+..+.|+| ++.|+.... ...|.+||+.+........ .
T Consensus 80 ----------~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 80 ----------EILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASW----DGLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp ----------CEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEET----TSEEEEECHHHHTTBCEEEEE
T ss_pred ----------eEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcC----CCeEEEEcccccccccccccC
Confidence 6888988 66532 2222200334567899999 888875432 2579999876400000000 0
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCC-CCCCCceEeecCCCCceeEEEEEee-CCEEEEEE
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNN-PCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHY 370 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~ 370 (734)
..... +......... |++++ ++..+. +..|..+|+.+ ... ......... ...+..+.+.. ++.+++..
T Consensus 142 ~~~~~-~~~~~~v~~~~~~~~~--l~~~~~----d~~i~i~d~~~~~~~-~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 142 LNSNN-TKVKNKIFTMDTNSSR--LIVGMN----NSQVQWFRLPLCEDD-NGTIEESGL-KYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp SCSSS-SSSCCCEEEEEECSSE--EEEEES----TTEEEEEESSCCTTC-CCEEEECSC-SSCEEEEEECSGGGCEEEEE
T ss_pred CeeeE-EeeCCceEEEEecCCc--EEEEeC----CCeEEEEECCccccc-cceeeecCC-CCceeEEEECCCCCCEEEEE
Confidence 00111 1111222222 66654 554433 34699999987 431 122222222 33455555554 45666666
Q ss_pred EeCCceeEEEEECCCC------ceeeeeCCCC---------ceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 371 IQNVRSVMDLHDLNTG------KRLHSFPLDL---------GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 371 ~~~~~~~l~~~dl~~g------~~~~~l~~~~---------g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..++ .+.+|++..+ +....+.... +.+..+.++++++.++... . -..++.||+
T Consensus 213 ~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~---dg~i~vwd~ 280 (342)
T 1yfq_A 213 SIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-S---DGIISCWNL 280 (342)
T ss_dssp ETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-T---TSCEEEEET
T ss_pred ecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec-C---CceEEEEcC
Confidence 6654 6777777554 4444444332 2677888899887665433 2 246999999
No 336
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=98.97 E-value=1e-08 Score=100.98 Aligned_cols=198 Identities=13% Similarity=0.102 Sum_probs=113.3
Q ss_pred cEEEEecCCCCCcCCccccHHHHHHHHhcC---eEEEEEecccCCC--CCchhh--------hccccccCC------Cch
Q psy4818 489 PVIIYGYGGYGVSVLPTFSISRCMFLRHFN---GIYAIPNIRGGGE--LGEDWH--------NAGRLLKKQ------NCF 549 (734)
Q Consensus 489 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~rG~~~--~g~~~~--------~~~~~~~~~------~~~ 549 (734)
+.||++||..+... .|.. +...|++.| +.|+.+++++.|. +...+. ..+...+.. ...
T Consensus 5 ~pvv~iHG~~~~~~--~~~~-~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 5 APVIMVPGSSASQN--RFDS-LITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp CCEEEECCCGGGHH--HHHH-HHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCEEEECCCCCCHH--HHHH-HHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 45677899766543 3333 345666666 6777777776442 100110 000011100 123
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC-----CCceeEEEEcCCcchhccccccccCcccccccCCC
Q psy4818 550 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-----PELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 624 (734)
Q Consensus 550 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-----p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~ 624 (734)
+++.++++.|.++. ..+++.++||||||+++..++.++ |+.++.+|+..+..+..... . .
T Consensus 82 ~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-----~--------~ 146 (250)
T 3lp5_A 82 VWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-----T--------T 146 (250)
T ss_dssp HHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----S--------S
T ss_pred HHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----c--------c
Confidence 66777788876652 446899999999999999988876 56778888766544332110 0 0
Q ss_pred CCHHHHHHHHhCCccCCCCCCCCCccCCcEEEEecC----CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeC--C
Q psy4818 625 NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD----HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ--D 698 (734)
Q Consensus 625 ~~~~~~~~~~~~sp~~~~~~p~~~~~~P~~Li~~g~----~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~--~ 698 (734)
.....+..|....+ .+. .+.| +|+++|+ .|..||...++.+...++.. ......+.+. +
T Consensus 147 ~~~~~~~~l~~~~~--~lp-----~~vp-vl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~-------~~~~~~~~v~g~~ 211 (250)
T 3lp5_A 147 AKTSMFKELYRYRT--GLP-----ESLT-VYSIAGTENYTSDGTVPYNSVNYGKYIFQDQ-------VKHFTEITVTGAN 211 (250)
T ss_dssp CCCHHHHHHHHTGG--GSC-----TTCE-EEEEECCCCCCTTTBCCHHHHTTHHHHHTTT-------SSEEEEEECTTTT
T ss_pred ccCHHHHHHHhccc--cCC-----CCce-EEEEEecCCCCCCceeeHHHHHHHHHHhccc-------ccceEEEEEeCCC
Confidence 11123333432211 111 2344 9999999 89999988877766666543 2333334444 5
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHH
Q psy4818 699 AGHGQGTPLMKSIEEMTDIYVFLM 722 (734)
Q Consensus 699 ~gH~~~~~~~~~~~~~~~~~~fl~ 722 (734)
++|..... + -+....+.+||.
T Consensus 212 a~H~~l~e-~--~~v~~~I~~FL~ 232 (250)
T 3lp5_A 212 TAHSDLPQ-N--KQIVSLIRQYLL 232 (250)
T ss_dssp BSSCCHHH-H--HHHHHHHHHHTS
T ss_pred Cchhcchh-C--HHHHHHHHHHHh
Confidence 67977532 2 255556677765
No 337
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.97 E-value=2.3e-07 Score=96.11 Aligned_cols=250 Identities=11% Similarity=0.056 Sum_probs=142.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
..+++|+|||+ |.++.... ..|+++|+++++..... .......+++|+|||+ |++..... ..
T Consensus 47 ~~~~~~~~~g~-l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~-----------~~ 109 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVFE----GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGD-----------FK 109 (333)
T ss_dssp EEEEEECTTSC-EEEEETTT----CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTT-----------SS
T ss_pred ccCcEECCCCC-EEEEECCC----CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCC-----------CC
Confidence 57899999998 44433222 37999999988754322 1222346889999997 44443211 01
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC---CCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN---TQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~---~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
....|++++..+.... .+............+.++|||+.++ ..... .....||.++.+++ ....+
T Consensus 110 ~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~---------~~~~~ 177 (333)
T 2dg1_A 110 STGGIFAATENGDNLQ--DIIEDLSTAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFR---------TVTPI 177 (333)
T ss_dssp SCCEEEEECTTSCSCE--EEECSSSSCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSC---------CEEEE
T ss_pred CCceEEEEeCCCCEEE--EEEccCccCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCC---------EEEEe
Confidence 1247888887765422 1222111122456789999997544 33221 11257999987762 12223
Q ss_pred eccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE----ee-cCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 300 IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT----LI-PEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 300 ~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~----l~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
......... .|++||+.+|+.... ...|+++++++... .+.. +. ..........+.+..++.+++....+
T Consensus 178 ~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~~g~-~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 253 (333)
T 2dg1_A 178 IQNISVANGIALSTDEKVLWVTETT---ANRLHRIALEDDGV-TIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ 253 (333)
T ss_dssp EEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSS-SEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT
T ss_pred ecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEecCCCc-CcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC
Confidence 222222222 389999988876543 34699999853210 1111 11 11111234455555556676665433
Q ss_pred CceeEEEEECCCCceeeeeCCCCc------eEEeeccCcccceEEEEEecC--CCCceEEEEeC
Q psy4818 374 VRSVMDLHDLNTGKRLHSFPLDLG------QITHISGRRKYNEVFYGFTSF--LQPGTIYHCNI 429 (734)
Q Consensus 374 ~~~~l~~~dl~~g~~~~~l~~~~g------~v~~~~~~~d~~~l~~~~ss~--~~P~~~~~~d~ 429 (734)
..|++||. +|+.++.+..+.. .+.++.+++|++.+++..+.. .....+|.+++
T Consensus 254 --~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 254 --GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp --TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred --CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 47999998 6776666655422 345666678877888766543 23467888887
No 338
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.97 E-value=3.6e-07 Score=94.69 Aligned_cols=225 Identities=11% Similarity=0.076 Sum_probs=136.2
Q ss_pred EEEeeEEeCCCCc-EEEEEEeCCCCceEEEEEEEC-CCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCC
Q psy4818 142 TALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDV-DTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 142 ~~~~~~~~SPDG~-~la~~~~~~g~~~~~l~v~dl-~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~ 217 (734)
..+..++|||||+ +|+.... . ..|++||+ .+++...... ....+..+.|+| ++.|+....+.
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~-d----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~-------- 122 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTV-Q----GEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDG-------- 122 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEET-T----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTS--------
T ss_pred CceEEEEECCCCCcEEEEEcC-C----CeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCC--------
Confidence 3478899999999 8876653 2 36999999 8887533322 333346899999 88777665432
Q ss_pred cccccCCcEEEEEECCC---------CCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC-CCC
Q psy4818 218 ETTAHMGQKIYYHVLGT---------EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-LPD 287 (734)
Q Consensus 218 ~~~~~~~~~l~~~~l~t---------~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~-~~~ 287 (734)
.|++|++.+ ...... +. .......+.|+|++ ++.. . ....|++||+.+ +..
T Consensus 123 --------~i~iwd~~~~~~~~~~~~~~~~~~--~~---~~~~v~~~~~~~~~--l~~~-~---~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 123 --------LIEVIDPRNYGDGVIAVKNLNSNN--TK---VKNKIFTMDTNSSR--LIVG-M---NNSQVQWFRLPLCEDD 183 (342)
T ss_dssp --------EEEEECHHHHTTBCEEEEESCSSS--SS---SCCCEEEEEECSSE--EEEE-E---STTEEEEEESSCCTTC
T ss_pred --------eEEEEcccccccccccccCCeeeE--Ee---eCCceEEEEecCCc--EEEE-e---CCCeEEEEECCccccc
Confidence 688888765 322111 11 23356678999998 4432 2 225899999986 321
Q ss_pred CcccCCCCceeeeccc-cceEE-EEEe-cCCeEEEEeCCCCCCceEEEEecCCC--C--CCCceEeecCCC-------Cc
Q psy4818 288 GKISGKFPLKTVIPGM-DHHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNP--C--EKNWKTLIPEDE-------NR 353 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~-~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~--~--~~~~~~l~~~~~-------~~ 353 (734)
......... ..... .|+| +++.++..+. +..+.+++++.. . ......+..+.. ..
T Consensus 184 -------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 184 -------NGTIEESGLKYQIRDVALLPKEQEGYACSSI----DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp -------CCEEEECSCSSCEEEEEECSGGGCEEEEEET----TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred -------cceeeecCCCCceeEEEECCCCCCEEEEEec----CCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 111111111 22223 3889 9887776554 245777777654 0 011233333321 12
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEE
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~ 414 (734)
.+..+.+..++.++++...+ ..|++||+.+++.+..+... .+.+..+. +++..++..
T Consensus 253 ~i~~~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSD--GIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp CEEEEEECTTTCCEEEEETT--SCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred eEEEEEEcCCCCEEEEecCC--ceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEE
Confidence 45556555545666666555 47999999889887788766 67777776 777655543
No 339
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.97 E-value=5.3e-10 Score=110.50 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=63.1
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|.||++||..+... .|.. +...|.+ +|.|+++|.||.|.... ...+|+.+.++.+++.-.+
T Consensus 11 ~~~~~lv~lhg~g~~~~--~~~~-~~~~L~~-~~~vi~~Dl~GhG~S~~------------~~~~~~~~~~~~~~~~l~~ 74 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA--SFRP-LHAFLQG-ECEMLAAEPPGHGTNQT------------SAIEDLEELTDLYKQELNL 74 (242)
T ss_dssp TCCCEEESSCCCCHHHH--HHHH-HHHHHCC-SCCCEEEECCSSCCSCC------------CTTTHHHHHHHHTTTTCCC
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHhCCC-CeEEEEEeCCCCCCCCC------------CCcCCHHHHHHHHHHHHHh
Confidence 45678899999765543 3443 3455654 89999999999664321 1245777777776554222
Q ss_pred -CCCcEEEEEcChHHHHHHHHHhc------CCCc
Q psy4818 566 -KPKYITIMGGSNGGLLVGACLNQ------RPEL 592 (734)
Q Consensus 566 -d~~ri~i~G~S~GG~~~~~~~~~------~p~~ 592 (734)
..+++.++|||+||.++..++.+ +|+.
T Consensus 75 ~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~ 108 (242)
T 2k2q_B 75 RPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA 108 (242)
T ss_dssp CCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS
T ss_pred hcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE
Confidence 23689999999999999999875 6775
No 340
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.97 E-value=7.7e-10 Score=122.04 Aligned_cols=127 Identities=20% Similarity=0.176 Sum_probs=87.2
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCc---CCccccHHHHHHHHhcCeEEEEEecccCC-CCCchhhhccccccCCC
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~~~~~~~~~~~ 547 (734)
+.+.++.|+.. .++.|+||++|||.... ....+.. ..+..+.|++|+.+|||.+. ||+..... ....+..
T Consensus 93 l~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~~~--~~~~~n~ 166 (529)
T 1p0i_A 93 LYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDG--KFLARVERVIVVSMNYRVGALGFLALPGN--PEAPGNM 166 (529)
T ss_dssp CEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCTTC--TTSCSCH
T ss_pred CeEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccCh--HHHhccCCeEEEEecccccccccccCCCC--CCCcCcc
Confidence 55667788753 26789999999985332 2222433 23334369999999999531 22211000 0112233
Q ss_pred chhHHHHHHHHHHHc---CCCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcch
Q psy4818 548 CFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALD 604 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d 604 (734)
.+.|+.++++|+.++ --.||+||.|+|+|+||.+++.++... +.+|+++|+.+|...
T Consensus 167 gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 167 GLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 478999999999875 237999999999999999999988753 458999999999754
No 341
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.96 E-value=7.4e-08 Score=104.21 Aligned_cols=249 Identities=10% Similarity=0.083 Sum_probs=137.1
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc-----------cccc-ccc------------cccCeeEEEc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-----------YPEV-LKN------------VKFPSISWTH 197 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~-----------~~~~-~~~------------~~~~~~~wSp 197 (734)
..+..++|||||++||..... ..|++||+.+++. +... ... ..+..+.|+|
T Consensus 29 ~~V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKG-----GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETT-----SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred CcEEEEEECCCCCEEEEEcCC-----CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 347899999999999976532 3799999987762 1111 111 2246899999
Q ss_pred CC--cEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC-------------------------------------
Q psy4818 198 DH--KGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK------------------------------------- 238 (734)
Q Consensus 198 Dg--~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~------------------------------------- 238 (734)
++ ..|+....+. .|.+|++.+....
T Consensus 104 ~~~~~~l~s~s~d~----------------~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
T 3dw8_B 104 QKNAAQFLLSTNDK----------------TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEAS 167 (447)
T ss_dssp CCSSSEEEEEECSS----------------CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEE
T ss_pred CCCcceEEEeCCCC----------------eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeecc
Confidence 98 6676665432 4555555431100
Q ss_pred CeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC-CCCceeeeccccceEEE-EEecC-C
Q psy4818 239 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG-KFPLKTVIPGMDHHHEI-IANNG-P 315 (734)
Q Consensus 239 ~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~~~~l~~~~~~~~~~-~s~dg-~ 315 (734)
...++.. .+...+..++|+|||++|+.. ....|.+||+.+. ...+.. ......+.......... |+|+| +
T Consensus 168 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~-----~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 240 (447)
T 3dw8_B 168 PRRIFAN-AHTYHINSISINSDYETYLSA-----DDLRINLWHLEIT-DRSFNIVDIKPANMEELTEVITAAEFHPNSCN 240 (447)
T ss_dssp EEEEECS-CCSSCCCEEEECTTSSEEEEE-----CSSEEEEEETTEE-EEEEEEEECCCSSGGGCCCCEEEEEECSSCTT
T ss_pred ceEEecc-CCCcceEEEEEcCCCCEEEEe-----CCCeEEEEECCCC-CceeeeeecccccccccCcceEEEEECCCCCc
Confidence 0001111 223345678999999998742 1368999999841 100000 00000011122223333 99998 5
Q ss_pred eEEEEeCCCCCCceEEEEecCCCCC-CCceEeecCCCC-----------ceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 316 ELIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDEN-----------RTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 316 ~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
.|+..+. +..|..+|+.++.. ......+..... ..+..+.+..++.++++... ..|.+||+
T Consensus 241 ~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v~iwd~ 313 (447)
T 3dw8_B 241 TFVYSSS----KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSVKVWDL 313 (447)
T ss_dssp EEEEEET----TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEEEEEET
T ss_pred EEEEEeC----CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeEEEEeC
Confidence 5555443 24599999877541 001233333212 14556666555566655544 57999999
Q ss_pred CC-CceeeeeCCCCce---------------EEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 384 NT-GKRLHSFPLDLGQ---------------ITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 384 ~~-g~~~~~l~~~~g~---------------v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+ ++.+..+...... +..+.++++++.+ ++.+. -..++.||+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~---dg~v~iwd~ 371 (447)
T 3dw8_B 314 NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSY---NNFFRMFDR 371 (447)
T ss_dssp TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECS---TTEEEEEET
T ss_pred CCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEecc---CCEEEEEEc
Confidence 76 6655555433211 1126778888766 34333 257999999
No 342
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.96 E-value=2.2e-07 Score=98.72 Aligned_cols=247 Identities=9% Similarity=0.025 Sum_probs=142.3
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC------cccc-cccccccCeeEEEcC----C---cEEEEEE
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK------DYPE-VLKNVKFPSISWTHD----H---KGFFYNQ 206 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~------~~~~-~~~~~~~~~~~wSpD----g---~~l~y~~ 206 (734)
...+..++|+| ++|+.... . ..|++||+.+++ .+.. ......+..+.|+|| | +.|+...
T Consensus 16 ~~~i~~~~~~~--~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 16 DADIFSVSACN--SFTVSCSG-D----GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp SSCEEEEEECS--SEEEEEET-T----SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hcCeEEEEecC--CeEEEEcC-C----CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 34578899999 66665543 2 479999999887 2221 112223468899999 8 8777766
Q ss_pred EecCCCCCCCCcccccCCcEEEEEECCCCCCCCee-EEecCCC-----CeeEEEEEEe----cCCcE-EEEEEecCCCCc
Q psy4818 207 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP-VVEFPNG-----RSLGLHSEVT----DCGRY-LLVSTSNNTQGS 275 (734)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~-v~~~~~~-----~~~~~~~~~S----pDG~~-l~~~~~~~~~~~ 275 (734)
.+. .|++|++.+....... +...... ...+..+.|+ |||++ |+.... ..
T Consensus 89 ~dg----------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~----dg 148 (397)
T 1sq9_A 89 FSG----------------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV----KG 148 (397)
T ss_dssp TTS----------------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET----TS
T ss_pred CCC----------------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC----CC
Confidence 432 5777887765421111 2222222 2456789999 99999 664332 25
Q ss_pred eEEEEeCCC------CCCCcccCCCCceeeec-------cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCC
Q psy4818 276 DLHYFDLHS------LPDGKISGKFPLKTVIP-------GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK 341 (734)
Q Consensus 276 ~i~~~d~~~------~~~~~l~~~~~~~~l~~-------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 341 (734)
.|++||+.+ +..-.+. +...+.. ....... .|+|++ .++. ... +..|..+|+.++.
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~---dg~i~i~d~~~~~-- 218 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWS---PTLELQGTVESPMTPSQFATSVDISERG-LIAT-GFN---NGTVQISELSTLR-- 218 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCC---CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-ECT---TSEEEEEETTTTE--
T ss_pred cEEEEeCCccccccccceeecc---CcceeeeeeccccCCCCCceEEEECCCc-eEEE-EeC---CCcEEEEECCCCc--
Confidence 788888876 2211100 0002211 1122223 389998 4443 332 3569999997654
Q ss_pred CceEeecC---C--CCceeEEEEEeeCCEEEEEEEeC-CceeEEEEECCCCceeeeeCC-------------CCceEEee
Q psy4818 342 NWKTLIPE---D--ENRTLDVVAAVANNKLIVHYIQN-VRSVMDLHDLNTGKRLHSFPL-------------DLGQITHI 402 (734)
Q Consensus 342 ~~~~l~~~---~--~~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~dl~~g~~~~~l~~-------------~~g~v~~~ 402 (734)
....+.. . ....+..+.+..++.++++...+ ....|++||+.+++.+..+.. ..+.+..+
T Consensus 219 -~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 219 -PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 297 (397)
T ss_dssp -EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred -eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE
Confidence 2222322 1 02344555554434444444443 335899999988888777776 55667788
Q ss_pred ccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 403 SGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 403 ~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++++++.++.. +. -..++.||+
T Consensus 298 ~~~~~~~~l~~~-~~---dg~i~iwd~ 320 (397)
T 1sq9_A 298 SFNDSGETLCSA-GW---DGKLRFWDV 320 (397)
T ss_dssp EECSSSSEEEEE-ET---TSEEEEEET
T ss_pred EECCCCCEEEEE-eC---CCeEEEEEc
Confidence 889988765543 32 247999999
No 343
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.95 E-value=2.7e-08 Score=105.54 Aligned_cols=244 Identities=11% Similarity=0.103 Sum_probs=140.8
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..+.|||||++|+-... ...|++||+.+++.+... .....+...+|+|||+.|+....+.
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~-----D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~---------- 130 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQ-----DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS---------- 130 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS----------
T ss_pred ccEEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC----------
Confidence 345789999999999885543 247999999998754322 1222346789999999887665432
Q ss_pred cccCCcEEEEEECCCCCCCC---eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 220 TAHMGQKIYYHVLGTEQDKD---IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~---~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
.+.++++.+....+ ........+......+.|+|++...+++.+ ....|.+||+.++.. .
T Consensus 131 ------~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s---~D~~i~~wd~~~~~~--------~ 193 (380)
T 3iz6_a 131 ------ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS---GDQTCVLWDVTTGQR--------I 193 (380)
T ss_dssp ------CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC---TTSCEEEECTTTCCE--------E
T ss_pred ------cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC---CCCcEEEEEcCCCcE--------E
Confidence 46666765432110 000011122334456788998665444443 236799999987321 1
Q ss_pred eee-----eccccceEEE-EEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEE
Q psy4818 297 KTV-----IPGMDHHHEI-IAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 297 ~~l-----~~~~~~~~~~-~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 369 (734)
..+ .......... |.+ +++.|+-.+. +..|..||+..... ....+..+. ..+..+.+..++..+++
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~----D~~v~~wd~~~~~~-~~~~~~~h~--~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSLNANMFISGSC----DTTVRLWDLRITSR-AVRTYHGHE--GDINSVKFFPDGQRFGT 266 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSSSCCEEEEEET----TSCEEEEETTTTCC-CCEEECCCS--SCCCEEEECTTSSEEEE
T ss_pred EEeecccCCCCccCeEEEEeecCCCCEEEEEEC----CCeEEEEECCCCCc-ceEEECCcC--CCeEEEEEecCCCeEEE
Confidence 111 0111112222 544 5554443332 34588999864321 123333332 33455555554666777
Q ss_pred EEeCCceeEEEEECCCCceeeeeCCC-------CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 370 YIQNVRSVMDLHDLNTGKRLHSFPLD-------LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g~~~~~l~~~-------~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+ ..+.+||+.+|+.+..+... ...+..+.+++++..++...+ -..++.||+
T Consensus 267 ~s~D--~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----dg~i~vwd~ 327 (380)
T 3iz6_a 267 GSDD--GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS----NGDCYVWDT 327 (380)
T ss_dssp ECSS--SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT----TSCEEEEET
T ss_pred EcCC--CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC----CCCEEEEEC
Confidence 7666 47999999888876655432 122556778888876654432 246999998
No 344
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.94 E-value=9.8e-09 Score=105.92 Aligned_cols=209 Identities=8% Similarity=-0.112 Sum_probs=114.7
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHH-HHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~ 563 (734)
.+..|.||++||.........|.. +...|. .||.|+.+|+||.|... .....++++.+. ++.+.+.
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~-~~~~L~-~~~~v~~~d~~G~G~~~----------~~~~~~~~~~~~~~~~l~~~- 144 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSR-LAEELD-AGRRVSALVPPGFHGGQ----------ALPATLTVLVRSLADVVQAE- 144 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHH-HHHHHC-TTSEEEEEECTTSSTTC----------CEESSHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEECCCCcCCCHHHHHH-HHHHhC-CCceEEEeeCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh-
Confidence 356788999999422222233443 455664 69999999999955311 111234444433 2233222
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcC---CCceeEEEEcCCcchhcc--ccc-c--ccCccccc---ccCCCC-CHHHHH
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGALDMLR--FNK-F--TIAYYSES---EFGSPN-NKTHFH 631 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~~d~~~--~~~-~--~~~~~~~~---~~g~~~-~~~~~~ 631 (734)
...+++.|+|||+||.++..++.+. |+.++++|+..+...... ... . ........ .+.... ....+.
T Consensus 145 -~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 223 (319)
T 3lcr_A 145 -VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRIT 223 (319)
T ss_dssp -HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred -cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHH
Confidence 1235799999999999999998876 777888887665432111 000 0 00000000 011111 011111
Q ss_pred HH----HhCCccCCCCCCCCCccCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCCCCc-
Q psy4818 632 NL----LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGTP- 706 (734)
Q Consensus 632 ~~----~~~sp~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~~~~- 706 (734)
.+ ....-+ .. . .+++| +|+++|.. +.+++.....+.+.+.. ...++++++ +|.....
T Consensus 224 ~~~~~~~~~~~~-~~-~---~i~~P-vLli~g~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~g-~H~~~~~~ 285 (319)
T 3lcr_A 224 AQVWCLELLRGW-RP-E---GLTAP-TLYVRPAQ-PLVEQEKPEWRGDVLAA----------MGQVVEAPG-DHFTIIEG 285 (319)
T ss_dssp HHHHHHHHTTTC-CC-C---CCSSC-EEEEEESS-CSSSCCCTHHHHHHHHT----------CSEEEEESS-CTTGGGST
T ss_pred HHHHHHHHHhcC-CC-C---CcCCC-EEEEEeCC-CCCCcccchhhhhcCCC----------CceEEEeCC-CcHHhhCc
Confidence 11 111111 11 2 27788 99999986 67777777777766643 246677776 6654432
Q ss_pred hHHhHHHHHHHHHHHHHHcC
Q psy4818 707 LMKSIEEMTDIYVFLMKSLG 726 (734)
Q Consensus 707 ~~~~~~~~~~~~~fl~~~l~ 726 (734)
.. ..+..+.+.+||.+...
T Consensus 286 ~~-~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 286 EH-VASTAHIVGDWLREAHA 304 (319)
T ss_dssp TT-HHHHHHHHHHHHHHHHC
T ss_pred cc-HHHHHHHHHHHHHhccc
Confidence 22 24667778899988653
No 345
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.6e-07 Score=97.35 Aligned_cols=249 Identities=10% Similarity=0.005 Sum_probs=132.2
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-------cccc-cccccccCeeEEEcCCcEEEEEEEecCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-------DYPE-VLKNVKFPSISWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-------~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~ 211 (734)
+...+..++|||||++||-... . ..|++||+.++. .+.. ......+..++|+|||+.|+....+.
T Consensus 57 h~~~v~~v~~sp~~~~las~s~-D----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~-- 129 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSF-D----STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK-- 129 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEET-T----SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS--
T ss_pred ccCCEEEEEECCCCCEEEEEeC-C----CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC--
Confidence 3345889999999999886553 2 369999986432 1111 11112246789999999888766433
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
.|++|++.........+.....+...+..+.|+|||++|+-... ...|.+||+.++..
T Consensus 130 --------------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~iW~~~~~~~---- 187 (330)
T 2hes_X 130 --------------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY----DDTVRIWKDYDDDW---- 187 (330)
T ss_dssp --------------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET----TSCEEEEEEETTEE----
T ss_pred --------------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCCCe----
Confidence 68888885432222222222233445778999999998874332 25788888765210
Q ss_pred CCCCceeeeccccceEEE-EEecC--CeEEEEeCCCCCCceEEEEecCCCCCC---Cc--eEeecCCCCceeEEEEEeeC
Q psy4818 292 GKFPLKTVIPGMDHHHEI-IANNG--PELIVKTTKNAPKGKVVTINLNNPCEK---NW--KTLIPEDENRTLDVVAAVAN 363 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~-~s~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~---~~--~~l~~~~~~~~~~~~~~~~~ 363 (734)
.....+..+....... |+|++ ..|+-.+. +..|.+|++.++... .+ ...++......+..+.+.+
T Consensus 188 --~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~----D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~- 260 (330)
T 2hes_X 188 --ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD----DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF- 260 (330)
T ss_dssp --EEEEEECCCSSCEEEEEECCSSSSCEEEEEET----TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-
T ss_pred --eEEEEccCCCCcEEEEEecCCCCeeEEEEEeC----CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-
Confidence 0112222222233333 88884 34443332 234667776543110 01 1122221233455555555
Q ss_pred CEEEEEEEeCCceeEEEEECCCCce--eeee-CCCCc-eEEeeccCcc-cceEEEEEecCCCCceEEEEeC
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGKR--LHSF-PLDLG-QITHISGRRK-YNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~~--~~~l-~~~~g-~v~~~~~~~d-~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.++++...+ ..|.+|+..+++. .... ..... .+..+.+++. +..++++.+.. ..+.++|+
T Consensus 261 ~~~l~s~~~d--g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D---g~v~~W~~ 326 (330)
T 2hes_X 261 NGLIASVGAD--GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD---GIVNFWSL 326 (330)
T ss_dssp TSCEEEEETT--SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT---SEEEEEEC
T ss_pred CCEEEEEeCC--CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC---CcEEEEEe
Confidence 3456666655 4678888866642 2222 22333 5767777773 33444554443 46888887
No 346
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.93 E-value=6.1e-08 Score=104.80 Aligned_cols=245 Identities=13% Similarity=0.104 Sum_probs=139.7
Q ss_pred CcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 140 GTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 140 ~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
+...|..++||| ||++|+-+ ... ..|.+||++++...... ........+.|+|||+.|+....+.
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~-s~D----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg------ 231 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYAS-SME----GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG------ 231 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEE-CSS----SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS------
T ss_pred CCCCEEEEEEeCCCCCEEEEE-eCC----CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC------
Confidence 345588999999 67777633 323 36999999887532211 1122235789999999887655322
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
.|+++++.+.... ....+...+..+.|+|+++.++++.+.. ..|.+||+.++... ..
T Consensus 232 ----------~i~~wd~~~~~~~-----~~~~h~~~v~~v~~~p~~~~~~~s~s~d---~~v~iwd~~~~~~~-----~~ 288 (435)
T 4e54_B 232 ----------NVILLNMDGKELW-----NLRMHKKKVTHVALNPCCDWFLATASVD---QTVKIWDLRQVRGK-----AS 288 (435)
T ss_dssp ----------BEEEEESSSCBCC-----CSBCCSSCEEEEEECTTCSSEEEEEETT---SBCCEEETTTCCSS-----SC
T ss_pred ----------cEeeeccCcceeE-----EEecccceEEeeeecCCCceEEEEecCc---ceeeEEeccccccc-----ce
Confidence 6888888654321 1122334567899999999777665432 46888998773211 11
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCC-----ceeEEEEEeeCCEEEEE
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-----RTLDVVAAVANNKLIVH 369 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~l~~~ 369 (734)
.............. |+|||+.|+..+. +..|.+||+.++.. ...+..+... ..+......+++.+++.
T Consensus 289 ~~~~~~h~~~v~~~~~spdg~~l~s~~~----D~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (435)
T 4e54_B 289 FLYSLPHRHPVNAACFSPDGARLLTTDQ----KSEIRVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVG 362 (435)
T ss_dssp CSBCCBCSSCEEECCBCTTSSEEEEEES----SSCEEEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSCEEEE
T ss_pred EEEeeeccccccceeECCCCCeeEEEcC----CCEEEEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCEEEEE
Confidence 11111122222333 8999998775544 34588899876541 2233322211 11111222222333333
Q ss_pred EEeCC---------ceeEEEEECCCCceeeeeCCC-CceEEee-ccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 370 YIQNV---------RSVMDLHDLNTGKRLHSFPLD-LGQITHI-SGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 370 ~~~~~---------~~~l~~~dl~~g~~~~~l~~~-~g~v~~~-~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...++ ...|++||..+|+.+..+..+ ...|.++ .++|++..|+ +.+ . ..+.+||+
T Consensus 363 ~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~la-sg~-d---~~i~iW~~ 428 (435)
T 4e54_B 363 RYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLA-SAM-G---YHILIWSQ 428 (435)
T ss_dssp CCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEE-EEC-S---SEEEECCC
T ss_pred EcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEE-EEc-C---CcEEEEEC
Confidence 22221 135899999999887776544 3344444 4678886554 332 2 36899998
No 347
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.92 E-value=3.9e-08 Score=106.36 Aligned_cols=206 Identities=5% Similarity=-0.000 Sum_probs=121.0
Q ss_pred EeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCcccc---cccccccCeeEEEc-CCcEEEEEEEecCCCCCCCCc
Q psy4818 144 LKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTH-DHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 144 ~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~---~~~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~~~~ 218 (734)
+..++||| +++.||.... + ..|+|||+.+++.... ......+..++|+| |++.|+-...|.
T Consensus 122 V~~l~~~P~~~~~lasGs~-d----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~--------- 187 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSK-G----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG--------- 187 (435)
T ss_dssp EEEEEECSSCTTCEEEEET-T----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS---------
T ss_pred EEEEEEeCCCCCEEEEEeC-C----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC---------
Confidence 77899999 5667775543 3 3699999988764221 11222357899998 677666544332
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|.+|++.+... ..+.........+..+.|+|||++|+... ....|++||+.+.. ...
T Consensus 188 -------~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~----~dg~i~~wd~~~~~---------~~~ 245 (435)
T 4e54_B 188 -------TTRLQDFKGNIL--RVFASSDTINIWFCSLDVSASSRMVVTGD----NVGNVILLNMDGKE---------LWN 245 (435)
T ss_dssp -------CEEEEETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEEEEC----SSSBEEEEESSSCB---------CCC
T ss_pred -------EEEEeeccCCce--eEEeccCCCCccEEEEEECCCCCEEEEEe----CCCcEeeeccCcce---------eEE
Confidence 588888865421 12222222223455789999999987532 23579999987621 122
Q ss_pred eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec-CCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 299 VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-EDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 299 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
+.......... |+|+++.+++.+..+ ..|.+||+.+.... ..+.. ......+..+.+..++..+++...+ .
T Consensus 246 ~~~h~~~v~~v~~~p~~~~~~~s~s~d---~~v~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D--~ 318 (435)
T 4e54_B 246 LRMHKKKVTHVALNPCCDWFLATASVD---QTVKIWDLRQVRGK--ASFLYSLPHRHPVNAACFSPDGARLLTTDQK--S 318 (435)
T ss_dssp SBCCSSCEEEEEECTTCSSEEEEEETT---SBCCEEETTTCCSS--SCCSBCCBCSSCEEECCBCTTSSEEEEEESS--S
T ss_pred EecccceEEeeeecCCCceEEEEecCc---ceeeEEeccccccc--ceEEEeeeccccccceeECCCCCeeEEEcCC--C
Confidence 22222333333 889988776655433 35778888764321 11111 1112344555454445666666666 4
Q ss_pred eEEEEECCCCceeeee
Q psy4818 377 VMDLHDLNTGKRLHSF 392 (734)
Q Consensus 377 ~l~~~dl~~g~~~~~l 392 (734)
.|++||+.+++....+
T Consensus 319 ~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 319 EIRVYSASQWDCPLGL 334 (435)
T ss_dssp CEEEEESSSSSSEEEE
T ss_pred EEEEEECCCCccceEE
Confidence 7899999888755444
No 348
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.92 E-value=1.5e-09 Score=111.58 Aligned_cols=122 Identities=9% Similarity=-0.053 Sum_probs=85.0
Q ss_pred CCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCC
Q psy4818 468 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 547 (734)
Q Consensus 468 dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~ 547 (734)
++..+...++.|+.+. .+..+.||++||..+.... .|...+...|.++||.|+.+|+||.|.-. . ..
T Consensus 12 ~~~~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~---~--------~~ 78 (317)
T 1tca_A 12 PKSVLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLND---T--------QV 78 (317)
T ss_dssp CHHHHHHTEEETTBCT-TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSC---H--------HH
T ss_pred CHHHHhheeeCCCCCC-CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCc---H--------HH
Confidence 3445666677787653 3445678999998665432 13323457777789999999999843211 0 11
Q ss_pred chhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCCcch
Q psy4818 548 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALD 604 (734)
Q Consensus 548 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d 604 (734)
..+++.+.++++.++. ..+++.++|||+||+++..++.+.| +.++++|+.+|..+
T Consensus 79 ~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 79 NTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 2467778888877652 3368999999999999999887765 78899999887643
No 349
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.92 E-value=2.2e-09 Score=115.11 Aligned_cols=114 Identities=14% Similarity=0.060 Sum_probs=79.2
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|+||++||..+.. ...|...+...|.+ .||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~--~~~~~--~~~~~~~~dl~~~i~~l~~~~ 141 (432)
T 1gpl_A 67 NLNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ--YSQAS--QNIRVVGAEVAYLVQVLSTSL 141 (432)
T ss_dssp CTTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCcc--chhhH--hhHHHHHHHHHHHHHHHHHhc
Confidence 34678999999976554 22344423344443 69999999999965432 11110 111122467778888887553
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
-++.+++.++|||+||.+++.++.++|++++++++..|..
T Consensus 142 g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 142 NYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 3567899999999999999999999999888988877654
No 350
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.92 E-value=6.2e-10 Score=123.34 Aligned_cols=132 Identities=21% Similarity=0.154 Sum_probs=87.5
Q ss_pred EEcCCCcEEeEEEEEecccc-CCCCCcEEEEecCCCCCcCCc---------cccHHHHHHHHhcCeEEEEEecccCC-CC
Q psy4818 464 FRSKDGTRVPMYIIHRVGAL-RNRRNPVIIYGYGGYGVSVLP---------TFSISRCMFLRHFNGIYAIPNIRGGG-EL 532 (734)
Q Consensus 464 ~~s~dg~~i~~~~~~p~~~~-~~~~~P~vv~~hGg~~~~~~~---------~~~~~~~~~l~~~G~~v~~~~~rG~~-~~ 532 (734)
+.+.|. +.+.++.|.... .+++.|+||++|||....... .+.. ..+..+.|++|+.+|||.+. +|
T Consensus 75 ~~sedc--l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~--~~la~~~~vvvV~~nYRLg~~Gf 150 (579)
T 2bce_A 75 YGNEDC--LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDG--EEIATRGNVIVVTFNYRVGPLGF 150 (579)
T ss_dssp ESCSCC--CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCC--HHHHHHHTCEEEEECCCCHHHHH
T ss_pred CCCCCC--CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccCh--HHHhcCCCEEEEEeCCccccccC
Confidence 334554 566777887642 346789999999985322111 1111 23334458999999999532 22
Q ss_pred CchhhhccccccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCc
Q psy4818 533 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGA 602 (734)
Q Consensus 533 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 602 (734)
..... ....+...+.|+.+|++|+.++- -.||+||.|+|+|+||.++..++.. ...+|+++|+.+|.
T Consensus 151 l~~~~---~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 151 LSTGD---SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CCCSS---TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CcCCC---CCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 21100 01111124789999999998752 3699999999999999999988764 35699999998874
No 351
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.92 E-value=1.1e-09 Score=120.92 Aligned_cols=131 Identities=20% Similarity=0.217 Sum_probs=89.1
Q ss_pred cCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCc---CCccccHHHHHHHHhcCeEEEEEecccCC-CCCchhhhccc
Q psy4818 466 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGR 541 (734)
Q Consensus 466 s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~~~~~ 541 (734)
+.|. +.+.++.|+.. .++.|+||++|||.... ....+.. ..+..+.|++|+.+|||.+. ||...- ...
T Consensus 91 sedc--l~lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~ 162 (537)
T 1ea5_A 91 SEDC--LYLNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNG--KYLAYTEEVVLVSLSYRVGAFGFLALH--GSQ 162 (537)
T ss_dssp CSCC--CEEEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCT--HHHHHHHTCEEEECCCCCHHHHHCCCT--TCS
T ss_pred CCcC--CeEEEeccCCC--CCCCeEEEEECCCcccCCCCCCCccCh--HHHHhcCCEEEEEeccCccccccccCC--CCC
Confidence 4455 45566778753 36789999999985332 2222443 23343679999999999531 121100 000
Q ss_pred cccCCCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhc--CCCceeEEEEcCCcch
Q psy4818 542 LLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALD 604 (734)
Q Consensus 542 ~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d 604 (734)
...+...+.|+.++++|+.++- -.||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|...
T Consensus 163 ~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 163 EAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 1122335889999999998762 2699999999999999999998875 2458999999998654
No 352
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.92 E-value=1e-06 Score=89.72 Aligned_cols=245 Identities=11% Similarity=0.024 Sum_probs=137.3
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC--Ccccccc-cccccCeeEEEcC--CcEEEEEEEecCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--KDYPEVL-KNVKFPSISWTHD--HKGFFYNQYCDINGTAD 215 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g--~~~~~~~-~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~~ 215 (734)
...+..++|||||++||-.... ..|++||++++ +.+.... ....+..++|+|+ |+.|+-...|.
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~------ 77 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------ 77 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT------
T ss_pred cCceEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC------
Confidence 3457889999999999865532 36999999754 2222111 1223367899874 77776665432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++.++....+..+.. +...+..+.|+|+ |++|+.... ...|.+||+.++..
T Consensus 78 ----------~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s~----d~~v~~wd~~~~~~------ 135 (297)
T 2pm7_B 78 ----------KVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVASS----DGKVSVVEFKENGT------ 135 (297)
T ss_dssp ----------EEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEET----TSEEEEEEBCSSSC------
T ss_pred ----------EEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEEC----CCcEEEEEecCCCc------
Confidence 78889987654333333332 2335678999998 888774332 26789999876211
Q ss_pred CCceeeeccccceEEE-EEec-------------CCeEEEEeCCCCCCceEEEEecCCCCCC-CceEeecCCCCceeEEE
Q psy4818 294 FPLKTVIPGMDHHHEI-IANN-------------GPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDVV 358 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~d-------------g~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~ 358 (734)
.....+.......... |+|+ ++.|+..+. +..|.++|+.++... .....+... ...+..+
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~----D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v 210 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDV 210 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEET----TSCEEEEEEETTTTEEEEEEEECCC-SSCEEEE
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC----CCcEEEEEEcCCCceEEEEEEecCC-CCceEEE
Confidence 0111122222222222 7776 344443332 235777887654310 011122222 3445566
Q ss_pred EEeeC---CEEEEEEEeCCceeEEEEECCCCc--e-eeeeC--CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 359 AAVAN---NKLIVHYIQNVRSVMDLHDLNTGK--R-LHSFP--LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 359 ~~~~~---~~l~~~~~~~~~~~l~~~dl~~g~--~-~~~l~--~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..+ +.++++...+ ..+.+||+.++. . ...+. ...+.+..++++|+++.++.... . ..+.+++.
T Consensus 211 ~~sp~~~~~~~las~s~D--~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~-D---~~v~lw~~ 283 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQD--RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-D---NKVTLWKE 283 (297)
T ss_dssp EECCCCSSSEEEEEEETT--SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET-T---SCEEEEEE
T ss_pred EECCCCCCceEEEEEECC--CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC-C---CcEEEEEE
Confidence 66543 3677777766 468888885542 1 12331 22456778888999876654432 2 24666665
No 353
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.91 E-value=1.5e-07 Score=101.64 Aligned_cols=246 Identities=9% Similarity=0.038 Sum_probs=142.6
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC----------CCccc-ccccccccCeeEEEcCCcEEEEEEEecCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----------GKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDING 212 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~----------g~~~~-~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~ 212 (734)
+..++|+|++..++++....| .|++||+.+ .+.+. ..........++|+|+++.++++...
T Consensus 131 v~~l~~~p~~~~~lat~~~dg----~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~---- 202 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSS----DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD---- 202 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSS----CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT----
T ss_pred EEEEEECCCCCcEEEEECCCC----cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC----
Confidence 567999998555555544444 599999876 22221 11122234689999999844444421
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCC-----eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~-----~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
...|.+|++.+..... ...+. .+...+..+.|+|++..++++... ...|++||+.++..
T Consensus 203 -----------dg~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 203 -----------DHTICLWDINATPKEHRVIDAKNIFT--GHTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNNNT 266 (430)
T ss_dssp -----------TSCEEEEETTSCCBGGGEEECSEEEC--CCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCSCS
T ss_pred -----------CCeEEEEeCCCCCCCCceeccceeec--CCCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCCCC
Confidence 1268888887643211 11222 233356789999965555544432 26899999987321
Q ss_pred CcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCE
Q psy4818 288 GKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNK 365 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~ 365 (734)
. .....+.......... |+|+++.+++.+.. +..|.++|+.+... ....+..+. ..+..+.+.. ++.
T Consensus 267 ~-----~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~---dg~v~vwd~~~~~~-~~~~~~~h~--~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 267 S-----KPSHTVDAHTAEVNCLSFNPYSEFILATGSA---DKTVALWDLRNLKL-KLHSFESHK--DEIFQVQWSPHNET 335 (430)
T ss_dssp S-----SCSEEEECCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTTS-CSEEEECCS--SCEEEEEECSSCTT
T ss_pred C-----cceeEeecCCCCeEEEEeCCCCCCEEEEEeC---CCeEEEEeCCCCCC-CeEEeecCC--CCEEEEEECCCCCC
Confidence 0 1222222222222333 99999877766554 34699999976331 133333332 3445555544 346
Q ss_pred EEEEEEeCCceeEEEEECCCC--------------ceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 366 LIVHYIQNVRSVMDLHDLNTG--------------KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl~~g--------------~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++++...+ ..|.+||+... +.+..+......+..+.+++++..++++.+.. ..+.++++
T Consensus 336 ~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~ 408 (430)
T 2xyi_A 336 ILASSGTD--RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED---NIMQVWQM 408 (430)
T ss_dssp EEEEEETT--SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT---SEEEEEEE
T ss_pred EEEEEeCC--CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC---CCEEEeEc
Confidence 77777666 47888998541 23333333345678899999887566665543 46888887
No 354
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.91 E-value=3.1e-07 Score=97.71 Aligned_cols=248 Identities=11% Similarity=0.061 Sum_probs=145.0
Q ss_pred CcEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCc---EEEEEEEecCCCCCC
Q psy4818 140 GTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHK---GFFYNQYCDINGTAD 215 (734)
Q Consensus 140 ~~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~---~l~y~~~~~~~~~~~ 215 (734)
+...+..+.|+| ++++|+... .. ..|++||+.+++.+...........+.|+|++. .|+....+.
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 166 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSS-FD----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP------ 166 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEE-TT----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS------
T ss_pred CCCcEEEEEEccCCCcEEEEEe-CC----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC------
Confidence 345588999999 666666543 23 369999999988644332222335778888544 566554322
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC---
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG--- 292 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~--- 292 (734)
.|+++++.++.. +..+.. +...+..+.|+|+|++++++... ...|++||+.++. ..+..
T Consensus 167 ----------~v~~~d~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~ll~~~~~---dg~i~i~d~~~~~-~~~~~~~~ 228 (408)
T 4a11_B 167 ----------KVQLCDLKSGSC--SHILQG--HRQEILAVSWSPRYDYILATASA---DSRVKLWDVRRAS-GCLITLDQ 228 (408)
T ss_dssp ----------SEEEEESSSSCC--CEEECC--CCSCEEEEEECSSCTTEEEEEET---TSCEEEEETTCSS-CCSEECCT
T ss_pred ----------eEEEEeCCCcce--eeeecC--CCCcEEEEEECCCCCcEEEEEcC---CCcEEEEECCCCC-cccccccc
Confidence 688889876643 223332 33356789999999986655543 2579999997732 11100
Q ss_pred -----CCCcee-eeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC---CCCceeEE-EEEe
Q psy4818 293 -----KFPLKT-VIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE---DENRTLDV-VAAV 361 (734)
Q Consensus 293 -----~~~~~~-l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~~~-~~~~ 361 (734)
...... ........... |+|+|+.|+..+.. ..|..+|+.++... ...... ........ ....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
T 4a11_B 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD----NRMRLWNSSNGENT--LVNYGKVCNNSKKGLKFTVSCG 302 (408)
T ss_dssp TTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCBC--CCCCCCCCCCCSSCCCCEECCS
T ss_pred cccccceeeccccccccCceeEEEEcCCCCEEEEecCC----CeEEEEECCCCccc--eeccccccccccccceeEEecC
Confidence 000000 01112222333 89999888766543 35999999875421 111100 00111111 1112
Q ss_pred eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..+++.. .+ ..|++||+.+++.+..+....+.+..+.+++++..++. .+.. ..+..||+
T Consensus 303 ~~~~~~~~~-~~--~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~d---g~i~iw~~ 363 (408)
T 4a11_B 303 CSSEFVFVP-YG--STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS-GSRD---CNILAWVP 363 (408)
T ss_dssp SSSCEEEEE-ET--TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE-EETT---SCEEEEEE
T ss_pred CCceEEEEe-cC--CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE-ECCC---CeEEEEeC
Confidence 223444443 33 47999999999888888766777888899998866553 3332 46888998
No 355
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.90 E-value=2.7e-07 Score=96.48 Aligned_cols=241 Identities=13% Similarity=0.113 Sum_probs=136.6
Q ss_pred CcEEEeeEEeCCC---CcEEEEEEeCCCCceEEEEEEECCC-CCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 140 GTTALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 140 ~~~~~~~~~~SPD---G~~la~~~~~~g~~~~~l~v~dl~~-g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
+...+..++|||| |++|+.... + ..|++||+.+ +..+.... ....+..+.|+||++.|+....+.
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---- 108 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW-A----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK---- 108 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET-T----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS----
T ss_pred CCCceEEEEEcCCCCCceEEEEECC-C----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC----
Confidence 3455889999999 688876553 2 3699999987 54432221 222346899999999888665432
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEE--ecCCcEEEEEEecCCCCceEEEEeCCCCCCCc-c
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV--TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-I 290 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~-l 290 (734)
.|.+|++.+... +.+.. +...+..+.| +|+|++|+.... ...|++||+.++.... +
T Consensus 109 ------------~v~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 109 ------------TAKMWDLSSNQA--IQIAQ---HDAPVKTIHWIKAPNYSCVMTGSW----DKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp ------------EEEEEETTTTEE--EEEEE---CSSCEEEEEEEECSSCEEEEEEET----TSEEEEECSSCSSCSEEE
T ss_pred ------------cEEEEEcCCCCc--eeecc---ccCceEEEEEEeCCCCCEEEEccC----CCcEEEEECCCCcEEEEE
Confidence 788999887642 12222 2334567888 999998875432 2579999988732110 0
Q ss_pred cCCCCcee--------eeccccceE-----------------------E--EEEecCCe----EEEEeCCCCCCceEEEE
Q psy4818 291 SGKFPLKT--------VIPGMDHHH-----------------------E--IIANNGPE----LIVKTTKNAPKGKVVTI 333 (734)
Q Consensus 291 ~~~~~~~~--------l~~~~~~~~-----------------------~--~~s~dg~~----l~~~s~~~~~~~~l~~~ 333 (734)
........ ++....... . .+.+++.. ++..+. +..|..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----dg~i~i~ 243 (368)
T 3mmy_A 168 QLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI----EGRVAIH 243 (368)
T ss_dssp ECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET----TSEEEEE
T ss_pred ecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC----CCcEEEE
Confidence 00000000 000000000 0 02222211 222221 3457777
Q ss_pred ecCCCCC-CCceEeecCCCC----------ceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEee
Q psy4818 334 NLNNPCE-KNWKTLIPEDEN----------RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 402 (734)
Q Consensus 334 d~~~~~~-~~~~~l~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~ 402 (734)
++..... .....+..+... ..+..+.+..++.++++...+ ..|++||+.+++.+..+....+.+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD--GRFSFWDKDARTKLKTSEQLDQPISAC 321 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT--SCEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC--CeEEEEECCCCcEEEEecCCCCCceEE
Confidence 7765421 011222222100 035555565546666666665 469999998898878887666778889
Q ss_pred ccCcccceEEEEEe
Q psy4818 403 SGRRKYNEVFYGFT 416 (734)
Q Consensus 403 ~~~~d~~~l~~~~s 416 (734)
.+++++..++...+
T Consensus 322 ~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 322 CFNHNGNIFAYASS 335 (368)
T ss_dssp EECTTSSCEEEEEC
T ss_pred EECCCCCeEEEEec
Confidence 99999877665543
No 356
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.90 E-value=1.8e-07 Score=97.84 Aligned_cols=239 Identities=12% Similarity=0.064 Sum_probs=136.9
Q ss_pred cEEEeeEEeCCC---CcEEEEEEeCCCCceEEEEEEECCCCCcccccc------cccccCeeEEEcC----CcEEEEEEE
Q psy4818 141 TTALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL------KNVKFPSISWTHD----HKGFFYNQY 207 (734)
Q Consensus 141 ~~~~~~~~~SPD---G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~------~~~~~~~~~wSpD----g~~l~y~~~ 207 (734)
...+..++|||+ |..+.++....| .|.+||+.+++.+.... ....+..++|+|| |+.|+....
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 345889999985 665555554333 69999999776532211 1123468899999 445555443
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLP 286 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~ 286 (734)
+ ..|.++++.+.. .+..+. .+...+..+.|+| ++++|+.... ...|++||+.++.
T Consensus 94 d----------------g~i~v~d~~~~~--~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~ 149 (366)
T 3k26_A 94 R----------------GIIRIINPITMQ--CIKHYV--GHGNAINELKFHPRDPNLLLSVSK----DHALRLWNIQTDT 149 (366)
T ss_dssp T----------------CEEEEECTTTCC--EEEEEE--SCCSCEEEEEECSSCTTEEEEEET----TSCEEEEETTTTE
T ss_pred C----------------CEEEEEEchhce--Eeeeec--CCCCcEEEEEECCCCCCEEEEEeC----CCeEEEEEeecCe
Confidence 2 278899887653 222333 2334567899999 8888875432 2579999998721
Q ss_pred CCcccCCCCceee---eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee---------------
Q psy4818 287 DGKISGKFPLKTV---IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI--------------- 347 (734)
Q Consensus 287 ~~~l~~~~~~~~l---~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--------------- 347 (734)
....+ .......... |+|+++.|+..+.. ..|..+|+.++.. ...+.
T Consensus 150 --------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~ 215 (366)
T 3k26_A 150 --------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD----HSLKLWRINSKRM--MNAIKESYDYNPNKTNRPFI 215 (366)
T ss_dssp --------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT----SCEEEEESCSHHH--HHHHHHHHTCCGGGCSSCCC
T ss_pred --------EEEEecccccccCceeEEEECCCCCEEEEecCC----CCEEEEECCCCcc--ccccceeEEecCCCCccccc
Confidence 11111 1122223333 89999887765542 4588899876421 00000
Q ss_pred -----------cCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCce--------------eeeeCCCCceEEee
Q psy4818 348 -----------PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR--------------LHSFPLDLGQITHI 402 (734)
Q Consensus 348 -----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~--------------~~~l~~~~g~v~~~ 402 (734)
.......+..+.+. ++ ++++...+ ..|.+||+.+++. +..+....+.+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (366)
T 3k26_A 216 SQKIHFPDFSTRDIHRNYVDCVRWL-GD-LILSKSCE--NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291 (366)
T ss_dssp CEEECCCSEEECSSCSSCCCEEEEE-TT-EEEEECSS--SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred ceeeccCccccccCCcceEEEEEEc-CC-EEEEEecC--CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence 00012233444444 34 44445444 4788999866543 23333333445566
Q ss_pred ccCcc--cceEEEEEecCCCCceEEEEeC
Q psy4818 403 SGRRK--YNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 403 ~~~~d--~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++++ +..++.. +. -..++.||+
T Consensus 292 ~~s~~~~~~~l~~~-~~---dg~i~vwd~ 316 (366)
T 3k26_A 292 RFSMDFWQKMLALG-NQ---VGKLYVWDL 316 (366)
T ss_dssp CCEECTTSSEEEEE-CT---TSCEEEEEC
T ss_pred EEcCCCCCcEEEEE-ec---CCcEEEEEC
Confidence 77777 6555443 32 246999998
No 357
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.89 E-value=9.5e-07 Score=93.69 Aligned_cols=281 Identities=14% Similarity=0.123 Sum_probs=148.6
Q ss_pred CcEEeCCeEEEEEEcCCCC-eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeC-----CCCceE
Q psy4818 95 APQRQENNYFYFHNKGLQN-HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDWN 168 (734)
Q Consensus 95 ~p~~~g~~~~~~~~~~~~~-~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~-----~g~~~~ 168 (734)
+|-+++.++|-. +.+..+ ...+.+.+.......--+... .. - ++.+||||++|..+... .|....
T Consensus 79 ~p~~~~~~vyV~-n~~~~~~~~~VsVID~~t~~vv~~I~vG------~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 79 APAPDARRVYIQ-DPAHFAAITQQFVIDGSTGRILGMTDGG------FL-P-HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCCCCTTEEEEE-ECTTTCSSEEEEEEETTTTEEEEEEEEC------SS-C-EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred cCCCCCCEEEEE-CCCcCCCCCeEEEEECCCCEEEEEEECC------CC-C-ceEECCCCCEEEEEeccccccccCCCCC
Confidence 555777776544 433111 145777665443322222211 11 2 78999999998776531 122335
Q ss_pred EEEEEECCCCCccccc-cc-------ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCe
Q psy4818 169 TLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 240 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~-~~-------~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~ 240 (734)
.|.++|+.+++.+... .. ......+.+||||+++|..... ....|.++++.+.....
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~--------------~~~~VsVID~~t~kvv~- 214 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS--------------PAPAVGVVDLEGKTFDR- 214 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS--------------SSCEEEEEETTTTEEEE-
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC--------------CCCeEEEEECCCCeEEE-
Confidence 8999999999864322 11 1223578999999998876531 12368888877653211
Q ss_pred eEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCceE--EEEeCCCCCCCcccCCCCceeeeccccceEEEEEec
Q psy4818 241 PVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDL--HYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANN 313 (734)
Q Consensus 241 ~v~~~~~~~~~-----~~~~~~SpDG~~l~~~~~~~~~~~~i--~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~d 313 (734)
.+..+..... ...+.+++||+.+++.. ........ ..++... ..+. ....++++
T Consensus 215 -~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~------------~p~~-----~~~~~~~d 275 (426)
T 3c75_H 215 -MLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-ADGETKVTNTEVFHTED------------ELLI-----NHPAFSLR 275 (426)
T ss_dssp -EEECCSEEEEEEEETTEEEEEETTSSEEEEEC-CTTCCEEEECCCCSCTT------------SCBC-----SCCEECTT
T ss_pred -EEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-CCCcEEEEeeeeeccCC------------Ccee-----eEeeecCC
Confidence 1111110000 00134556666555443 11110000 0011111 0000 01136889
Q ss_pred CCeEEEEeCCCCCCceEEEEecCCCCC---CCceEe---------ecCCCCceeEEEEEeeCCEEEEEEEeC-------C
Q psy4818 314 GPELIVKTTKNAPKGKVVTINLNNPCE---KNWKTL---------IPEDENRTLDVVAAVANNKLIVHYIQN-------V 374 (734)
Q Consensus 314 g~~l~~~s~~~~~~~~l~~~d~~~~~~---~~~~~l---------~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~ 374 (734)
+++++|.+.. .+|+.+|+.+... ..|... .+.. ...+ ....+++++|+..... +
T Consensus 276 g~~~~~~s~~----g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g-~~~v--a~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 276 SGRLVWPTYT----GKIFQADLTAEGATFRAPIEALTEAERADDWRPGG-WQQT--AYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp TCEEEEEBTT----SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS-SSCE--EEEGGGTEEEEEEEECCTTCTTSC
T ss_pred CCEEEEEeCC----CcEEEEeccCCceEEeeeeeeccccccccccccCC-ceee--EEcCCCCEEEEEecccccccccCC
Confidence 9999988652 3699999865430 011100 0110 0111 2233446777765431 2
Q ss_pred ceeEEEEECCCCceeeeeCCCCceEEeeccCcccc-eEEEEEecCCCCceEEEEeC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN-EVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~-~l~~~~ss~~~P~~~~~~d~ 429 (734)
...|.++|+++++.++.|..+. ...++.+++|++ .+++.. .. -..+.++|+
T Consensus 349 s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n-~~--s~~VsVID~ 400 (426)
T 3c75_H 349 SRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALS-AG--TQTLHIYDA 400 (426)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEE-TT--TTEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEc-CC--CCeEEEEEC
Confidence 3589999999999888886542 244677889998 555443 22 257999999
No 358
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.7e-07 Score=101.25 Aligned_cols=211 Identities=14% Similarity=0.132 Sum_probs=121.5
Q ss_pred cEEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCC---CCccc--cc-ccccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 141 TTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDT---GKDYP--EV-LKNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 141 ~~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~---g~~~~--~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
...+..++||| ||++||.... ...|++||+.+ +.... .. .....+..++|+||++.|+....+.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~-----dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg---- 133 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSD-----QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG---- 133 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEET-----TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS----
T ss_pred CCceEEEEECCCCCCEEEEecC-----CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC----
Confidence 34588999999 9999986653 24799999877 54221 11 1222346899999999888766432
Q ss_pred CCCCcccccCCcEEEEEECC---CCCCCCe----eE--Eec-CC-CCeeEEEE--EEecCCcEEEEEEecCCCCceEEEE
Q psy4818 214 ADGTETTAHMGQKIYYHVLG---TEQDKDI----PV--VEF-PN-GRSLGLHS--EVTDCGRYLLVSTSNNTQGSDLHYF 280 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~---t~~~~~~----~v--~~~-~~-~~~~~~~~--~~SpDG~~l~~~~~~~~~~~~i~~~ 280 (734)
.|.+|++. ++..... .+ +.. +. .......+ .+++|+++|+.... ...|++|
T Consensus 134 ------------~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iw 197 (437)
T 3gre_A 134 ------------QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN----LSRVIIF 197 (437)
T ss_dssp ------------EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET----TSEEEEE
T ss_pred ------------EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC----CCeEEEE
Confidence 57777664 2211000 00 000 00 11122333 37789998875432 2689999
Q ss_pred eCCCCCCCcccCCCCceeeec--cccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEE
Q psy4818 281 DLHSLPDGKISGKFPLKTVIP--GMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDV 357 (734)
Q Consensus 281 d~~~~~~~~l~~~~~~~~l~~--~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 357 (734)
|+.++ .....+.. ........ |+|+++.|+..+.. ..|..||+.++. ....+.......+..
T Consensus 198 d~~~~--------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~---~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 198 DIRTL--------ERLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRFNV---LIRSWSFGDHAPITH 262 (437)
T ss_dssp ETTTC--------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTTTE---EEEEEBCTTCEEEEE
T ss_pred eCCCC--------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCCcc---EEEEEecCCCCceEE
Confidence 99873 12222322 22333333 89998877765543 459999998754 222222121334444
Q ss_pred EEEe----eCCEEEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 358 VAAV----ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 358 ~~~~----~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
+.+. .++.++++...+ ..|++||+.+++.++.+.
T Consensus 263 ~~~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSK--TFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEECTTTCTTEEEEEEESTT--EEEEEEETTTTEEEEEEE
T ss_pred EEeccccCCCccEEEEEcCC--CcEEEEEcCCCcEEEEEE
Confidence 4332 224466665554 589999998888666554
No 359
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.88 E-value=1.1e-06 Score=91.00 Aligned_cols=240 Identities=12% Similarity=0.020 Sum_probs=139.1
Q ss_pred CCcEEEeeEEeCCCC-cEEEEEEeCCCCceEEEEEEECCCCCcccc----cc--cccccCeeEEEcCCcEEEEEEEecCC
Q psy4818 139 DGTTALKLYAFSDNG-KHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----VL--KNVKFPSISWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 139 ~~~~~~~~~~~SPDG-~~la~~~~~~g~~~~~l~v~dl~~g~~~~~----~~--~~~~~~~~~wSpDg~~l~y~~~~~~~ 211 (734)
++...|..++||||+ ++|| +.... ..|++||+.+++.... +. ....+..+.|+|||+.|+....+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~-S~s~D----~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-- 108 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMIL-SASRD----KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG-- 108 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEE-EEETT----SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred CccCCEEEEEEeCCCCCEEE-EEcCC----CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc--
Confidence 445568899999985 6665 33333 3699999987653211 11 112346789999999887766432
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
.|+.++...... ...... .........+++++++|+.... ...+.+||+....
T Consensus 109 --------------~i~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~s~s~----d~~~~~~d~~~~~----- 161 (340)
T 4aow_A 109 --------------TLRLWDLTTGTT--TRRFVG--HTKDVLSVAFSSDNRQIVSGSR----DKTIKLWNTLGVC----- 161 (340)
T ss_dssp --------------EEEEEETTTTEE--EEEEEC--CSSCEEEEEECTTSSCEEEEET----TSCEEEECTTSCE-----
T ss_pred --------------cceEEeecccce--eeeecC--CCCceeEEEEeecCccceeecC----CCeEEEEEeCCCc-----
Confidence 577777765432 111221 2224456789999998874332 2568888886611
Q ss_pred CCCCceeeecc-ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEE
Q psy4818 292 GKFPLKTVIPG-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVH 369 (734)
Q Consensus 292 ~~~~~~~l~~~-~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 369 (734)
........ ...... .+++++...++++.. .+..|..+|+.+.. ....+... ...+..+.+..++.++++
T Consensus 162 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~---~~~~~~~h-~~~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 162 ---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCK---LKTNHIGH-TGYLNTVTVSPDGSLCAS 232 (340)
T ss_dssp ---EEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTE---EEEEECCC-SSCEEEEEECTTSSEEEE
T ss_pred ---eEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCc---eeeEecCC-CCcEEEEEECCCCCEEEE
Confidence 11111111 111222 267776544433321 23458889987754 22222222 334555656555667777
Q ss_pred EEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 370 YIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 370 ~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...+ ..+.+||+.+++.+..+... ..+..+.+++++. ++... + -..+..+|+
T Consensus 233 ~s~D--g~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~-~~~~~-~---d~~i~iwd~ 284 (340)
T 4aow_A 233 GGKD--GQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY-WLCAA-T---GPSIKIWDL 284 (340)
T ss_dssp EETT--CEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS-EEEEE-E---TTEEEEEET
T ss_pred EeCC--CeEEEEEeccCceeeeecCC-ceEEeeecCCCCc-eeecc-C---CCEEEEEEC
Confidence 7666 47899999888876666544 3455677777653 33332 2 246899998
No 360
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.86 E-value=9.9e-07 Score=91.85 Aligned_cols=233 Identities=10% Similarity=-0.003 Sum_probs=134.1
Q ss_pred EEEeeEEe-----CC-CCcEEEEEEeCCCCceEEEEEEECCCCCcc-------cc-cccccccCeeEEEcCCcEEEEEEE
Q psy4818 142 TALKLYAF-----SD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-------PE-VLKNVKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 142 ~~~~~~~~-----SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~-------~~-~~~~~~~~~~~wSpDg~~l~y~~~ 207 (734)
..+..+.| +| ||++|+-... ...|++||+.+++.. .. ......+..++|+||++.|+-...
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~-----D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSR-----DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEET-----TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcC-----CCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 34677888 77 9998885443 246999998765321 11 111112367899999998776554
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
+. .|.+|++.++.. +..+.. +...+..++|||||++|+... ....|.+||+.+ ..
T Consensus 97 D~----------------~v~lwd~~~~~~--~~~~~~--h~~~v~~v~~sp~~~~l~s~~----~d~~i~~wd~~~-~~ 151 (343)
T 2xzm_R 97 DK----------------TLRLWDLRTGTT--YKRFVG--HQSEVYSVAFSPDNRQILSAG----AEREIKLWNILG-EC 151 (343)
T ss_dssp TS----------------EEEEEETTSSCE--EEEEEC--CCSCEEEEEECSSTTEEEEEE----TTSCEEEEESSS-CE
T ss_pred CC----------------cEEEEECCCCcE--EEEEcC--CCCcEEEEEECCCCCEEEEEc----CCCEEEEEeccC-Cc
Confidence 32 789999887642 222332 334567899999999987433 225799999875 11
Q ss_pred CcccCCCCceeee---ccccceEEE-EEecC----------CeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 288 GKISGKFPLKTVI---PGMDHHHEI-IANNG----------PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 288 ~~l~~~~~~~~l~---~~~~~~~~~-~s~dg----------~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
..... ......... |+|++ ..|+..+. +..|..+|..... ...+... ..
T Consensus 152 --------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~----~~~~~~h-~~ 214 (343)
T 2xzm_R 152 --------KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW----DGRLKVWNTNFQI----RYTFKAH-ES 214 (343)
T ss_dssp --------EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET----TSEEEEEETTTEE----EEEEECC-SS
T ss_pred --------eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC----CCEEEEEcCCCce----eEEEcCc-cc
Confidence 00010 111112222 77776 33443332 3468888854321 2222222 23
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCC-CceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~-g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..+.+..++.++++...+ ..|++||+.+ +.....+.. ...+..+.++|++..+.. ++. ..+.++|+
T Consensus 215 ~v~~~~~s~~g~~l~sgs~d--g~v~iwd~~~~~~~~~~~~~-~~~v~~v~~sp~~~~la~--~~d---~~v~iw~~ 283 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGKD--KKLLIWDILNLTYPQREFDA-GSTINQIAFNPKLQWVAV--GTD---QGVKIFNL 283 (343)
T ss_dssp CEEEEEECTTSSEEEEEETT--CEEEEEESSCCSSCSEEEEC-SSCEEEEEECSSSCEEEE--EES---SCEEEEES
T ss_pred cceEEEECCCCCEEEEEcCC--CeEEEEECCCCcccceeecC-CCcEEEEEECCCCCEEEE--ECC---CCEEEEEe
Confidence 45556665556667777666 4789999843 333333322 234778888888764433 222 25888888
No 361
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.86 E-value=9.9e-08 Score=99.88 Aligned_cols=248 Identities=10% Similarity=0.022 Sum_probs=139.0
Q ss_pred EEEeeEEeCCC----CcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEc-CCcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDN----GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTH-DHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPD----G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSp-Dg~~l~y~~~~~~~~~~~ 215 (734)
..+..++|||| |++|+.... + ..|++||+.+++.+.... ....+..+.|+| |++.|+....+.
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~-d----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg------ 138 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGS-R----GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDH------ 138 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEET-T----CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTS------
T ss_pred CcEEEEEeccCCCCCCCEEEEecC-C----CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCC------
Confidence 34788999999 667775543 2 479999999988644322 222346899999 888777665432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCc-ccC-
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-ISG- 292 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~-l~~- 292 (734)
.|++|++.++. .+..+.. ..+...+..+.|+|||++|+.... ...|.+||+.++.... +..
T Consensus 139 ----------~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~ 202 (366)
T 3k26_A 139 ----------ALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM----DHSLKLWRINSKRMMNAIKES 202 (366)
T ss_dssp ----------CEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEET----TSCEEEEESCSHHHHHHHHHH
T ss_pred ----------eEEEEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecC----CCCEEEEECCCCcccccccee
Confidence 68889987653 2222211 223446778999999999875432 2579999998621100 000
Q ss_pred -----CC-------------CceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCC---------Cc-
Q psy4818 293 -----KF-------------PLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEK---------NW- 343 (734)
Q Consensus 293 -----~~-------------~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~---------~~- 343 (734)
.. .+............. |+ ++.++..+. +..|..+|+.+.... ..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~ 276 (366)
T 3k26_A 203 YDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC----ENAIVCWKPGKMEDDIDKIKPSESNVT 276 (366)
T ss_dssp HTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS----SSEEEEEEESSTTCCGGGCCTTCCCEE
T ss_pred EEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec----CCEEEEEeCCCccccccccccCCcchh
Confidence 00 000000011111122 54 665554333 356888998764310 00
Q ss_pred -eEeecCCCCceeEEEEEeeC--CEEEEEEEeCCceeEEEEECCCCcee----eeeCCC--CceEEeeccCcccceEEEE
Q psy4818 344 -KTLIPEDENRTLDVVAAVAN--NKLIVHYIQNVRSVMDLHDLNTGKRL----HSFPLD--LGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 344 -~~l~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~l~~~dl~~g~~~----~~l~~~--~g~v~~~~~~~d~~~l~~~ 414 (734)
...+... ...+..+.+..+ +.++++...+ ..|++||+.+++.. ..+... .+.+..+.++++++.++..
T Consensus 277 ~~~~~~~~-~~~v~~~~~s~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 277 ILGRFDYS-QCDIWYMRFSMDFWQKMLALGNQV--GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp EEEEEECS-SCCSSCCCCEECTTSSEEEEECTT--SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred eecccccc-CCcEEEEEEcCCCCCcEEEEEecC--CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE
Confidence 0011111 111122222333 4555555554 47999999877532 245544 4678889999988765543
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
+.. ..++.||+
T Consensus 354 -~~d---g~i~iwd~ 364 (366)
T 3k26_A 354 -CDD---ASIWRWDR 364 (366)
T ss_dssp -ETT---SEEEEEEC
T ss_pred -eCC---CEEEEEEe
Confidence 332 47888887
No 362
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.86 E-value=4.8e-09 Score=116.86 Aligned_cols=117 Identities=20% Similarity=0.219 Sum_probs=79.3
Q ss_pred CCCCcEEEEecCCCCCc---CCccccHHHHHHHHhcCeEEEEEecccC-CCCCc---hhhh-ccccccCCCchhHHHHHH
Q psy4818 485 NRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGE---DWHN-AGRLLKKQNCFDDFQAAA 556 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~-~~~g~---~~~~-~~~~~~~~~~~~D~~~~~ 556 (734)
.++.|+||++|||.... ..+.+... .+.++.|++|+.+|||-| -||.. .+.. ......+...+.|+++++
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~--~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNAD--IMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCH--HHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCch--hhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 46789999999985332 22234332 333446999999999942 12221 0000 001112233588999999
Q ss_pred HHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy4818 557 EYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 603 (734)
Q Consensus 557 ~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 603 (734)
+|+.++- -.||+||.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9998862 26999999999999999999887652 36899999988854
No 363
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.5e-06 Score=88.51 Aligned_cols=231 Identities=8% Similarity=0.030 Sum_probs=140.7
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..++| |||++|+.... . ..|++||+.+++..... ........+.|+||++.|+....+.
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~-d----g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------- 81 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSR-D----GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT----------- 81 (313)
T ss_dssp SCEEEEEE-EETTEEEEEET-T----SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS-----------
T ss_pred CCcEEEEe-cCCCEEEEEEc-C----CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC-----------
Confidence 34778889 99999886543 2 37999999888743322 1222346899999999888776433
Q ss_pred ccCCcEEEEEECCCCCCCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 221 AHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.|.++++....... +..+. .+...+..+.| ++++|+.... ...|.+||... ....+
T Consensus 82 -----~i~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~----d~~i~~~d~~~----------~~~~~ 138 (313)
T 3odt_A 82 -----MINGVPLFATSGEDPLYTLI--GHQGNVCSLSF--QDGVVISGSW----DKTAKVWKEGS----------LVYNL 138 (313)
T ss_dssp -----CEEEEETTCCTTSCC-CEEC--CCSSCEEEEEE--ETTEEEEEET----TSEEEEEETTE----------EEEEE
T ss_pred -----eEEEEEeeecCCCCcccchh--hcccCEEEEEe--cCCEEEEEeC----CCCEEEEcCCc----------EEEec
Confidence 57777776543221 22222 22334555666 6777764332 25788998222 12222
Q ss_pred eccccceEEE-EEe-cCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 300 IPGMDHHHEI-IAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 300 ~~~~~~~~~~-~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
.......... |.+ +++.++..+.. ..|..+|.... ...+.......+..+.+..++. +++...+ ..
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~-----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d--g~ 206 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASAD----KTIKLWQNDKV-----IKTFSGIHNDVVRHLAVVDDGH-FISCSND--GL 206 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETT----SCEEEEETTEE-----EEEECSSCSSCEEEEEEEETTE-EEEEETT--SE
T ss_pred ccCCCceeEEEEccCCCCEEEEEECC----CCEEEEecCce-----EEEEeccCcccEEEEEEcCCCe-EEEccCC--Ce
Confidence 2222333333 666 77777655543 35888884322 2233332234556666666566 5555555 47
Q ss_pred EEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|++||+.+++.+..+....+.+..+.+++++ .++ +.+. -..++.||+
T Consensus 207 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~~---dg~v~iwd~ 253 (313)
T 3odt_A 207 IKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-SCGE---DRTVRIWSK 253 (313)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-EEET---TSEEEEECT
T ss_pred EEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-EEec---CCEEEEEEC
Confidence 9999998898877787666778888889888 443 3332 357999998
No 364
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.86 E-value=5e-08 Score=120.36 Aligned_cols=231 Identities=12% Similarity=0.080 Sum_probs=148.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..++|||||++++..... ..|++||+.+++.+.... ....+..++|||||+.|+....+.
T Consensus 964 i~~~~~sp~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg------------- 1025 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDED-----GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS------------- 1025 (1249)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS-------------
T ss_pred EEEEEEcCCCCEEEEEcCC-----CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC-------------
Confidence 6789999999999987643 258999999987643222 222346899999999888765432
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
.|.+|++.++.. +. .......+..+.|+||++.+... ....|++||+.++. ....+...
T Consensus 1026 ---~i~vwd~~~~~~----~~-~~~~~~~v~~~~~~~~~~l~~~~-----~dg~v~vwd~~~~~--------~~~~~~~~ 1084 (1249)
T 3sfz_A 1026 ---VIQVWNWQTGDY----VF-LQAHQETVKDFRLLQDSRLLSWS-----FDGTVKVWNVITGR--------IERDFTCH 1084 (1249)
T ss_dssp ---BEEEEETTTTEE----EC-CBCCSSCEEEEEECSSSEEEEEE-----SSSEEEEEETTTTC--------CCEEEECC
T ss_pred ---EEEEEECCCCce----EE-EecCCCcEEEEEEcCCCcEEEEE-----CCCcEEEEECCCCc--------eeEEEccc
Confidence 688888877532 11 11233456788999988765431 22589999998832 22223322
Q ss_pred ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
...... .|+|||+.++..+. +..|..||+.++.. ...+..+ ...+..+.+..++.++++...++ .|++|
T Consensus 1085 ~~~v~~~~~s~d~~~l~s~s~----d~~v~iwd~~~~~~--~~~l~~h--~~~v~~~~~s~dg~~lat~~~dg--~i~vw 1154 (1249)
T 3sfz_A 1085 QGTVLSCAISSDATKFSSTSA----DKTAKIWSFDLLSP--LHELKGH--NGCVRCSAFSLDGILLATGDDNG--EIRIW 1154 (1249)
T ss_dssp SSCCCCEEECSSSSSCEEECC----SSCCCEECSSSSSC--SBCCCCC--SSCEEEEEECSSSSEEEEEETTS--CCCEE
T ss_pred CCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCcce--eeeeccC--CCcEEEEEECCCCCEEEEEeCCC--EEEEE
Confidence 222223 38999998776544 24578888876552 2222222 23455555555566777776664 58899
Q ss_pred ECCCCceeeee---------CCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSF---------PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l---------~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+|+.+..+ ....+.+..+.+++++..++.. + +.+..||+
T Consensus 1155 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~-~-----g~v~vwd~ 1205 (1249)
T 3sfz_A 1155 NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA-G-----GYLKWWNV 1205 (1249)
T ss_dssp ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE-S-----SSEEEBCS
T ss_pred ECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEEC-C-----CeEEEEEC
Confidence 99888765544 2224557788889998777543 2 57999998
No 365
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.85 E-value=3.1e-07 Score=105.78 Aligned_cols=238 Identities=13% Similarity=0.052 Sum_probs=144.8
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc------ccccccccCeeEEEcCCcEEEEEEEecCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP------EVLKNVKFPSISWTHDHKGFFYNQYCDINGT 213 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~------~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~ 213 (734)
|...+..++|+|++..+.++.+.. ..|++||+.++.... .......+..++|||||+.|+....+.
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D----~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg---- 452 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRD----KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG---- 452 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETT----SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS----
T ss_pred CCceeEEEEecCCCCCEEEEEeCC----CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC----
Confidence 445578899999875554444433 479999998654211 111112235789999999888766433
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++.++.. +..+. .+...+..++|||||++|+-.+ ....|.+||+.+..
T Consensus 453 ------------~v~vwd~~~~~~--~~~~~--~h~~~v~~~~~s~~~~~l~s~s----~D~~i~iwd~~~~~------- 505 (694)
T 3dm0_A 453 ------------ELRLWDLAAGVS--TRRFV--GHTKDVLSVAFSLDNRQIVSAS----RDRTIKLWNTLGEC------- 505 (694)
T ss_dssp ------------EEEEEETTTTEE--EEEEE--CCSSCEEEEEECTTSSCEEEEE----TTSCEEEECTTSCE-------
T ss_pred ------------cEEEEECCCCcc--eeEEe--CCCCCEEEEEEeCCCCEEEEEe----CCCEEEEEECCCCc-------
Confidence 789999877532 22222 2334567899999999987432 22578999976510
Q ss_pred CCceeeec----cccceEEE-EEecCCe-EEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 294 FPLKTVIP----GMDHHHEI-IANNGPE-LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 294 ~~~~~l~~----~~~~~~~~-~s~dg~~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
...+.. +....... |+|++.. +++.... +..|..+|+.+.. ....+... ...+..+.+..++.++
T Consensus 506 --~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~---d~~v~vwd~~~~~---~~~~~~~h-~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 506 --KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW---DKTVKVWNLSNCK---LRSTLAGH-TGYVSTVAVSPDGSLC 576 (694)
T ss_dssp --EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECTTSSEE
T ss_pred --ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC---CCeEEEEECCCCc---EEEEEcCC-CCCEEEEEEeCCCCEE
Confidence 111111 11112223 8888743 3333332 3458899997654 23333332 3445566665556777
Q ss_pred EEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++...+ ..|.+||+.+++.+..+.. ...+..+.+++++..+... +. ..+.++|+
T Consensus 577 ~sg~~D--g~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~-~~----~~i~iwd~ 630 (694)
T 3dm0_A 577 ASGGKD--GVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA-TE----HGIKIWDL 630 (694)
T ss_dssp EEEETT--SBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEE-ET----TEEEEEET
T ss_pred EEEeCC--CeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEE-cC----CCEEEEEC
Confidence 777666 4789999988887665543 3456678888887544332 22 25899999
No 366
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.85 E-value=6.3e-06 Score=84.15 Aligned_cols=252 Identities=12% Similarity=0.085 Sum_probs=142.4
Q ss_pred EEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc---ccccccCeeEEEcCCcEEEE
Q psy4818 128 EVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFY 204 (734)
Q Consensus 128 ~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~---~~~~~~~~~~wSpDg~~l~y 204 (734)
+.+||...+..+-+ +..++|||++ .||.+.+ .+|++||+++|+.+... .....+..++|+|||+.|+.
T Consensus 14 ~rvldap~~~~d~y--~~~l~WS~~~-~lAvg~D------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 14 DRILDAPEIRNDYY--LNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp SEEEECTTCCCCTT--CBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred CEEeeCCCCccccc--ceEEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 34567555533311 3458999997 7887653 36999999999865422 12222468999999998887
Q ss_pred EEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 205 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
...+. .|.+|++.++.. +..+.. +.... ..++++++.++... ....+.+++..+
T Consensus 85 gs~Dg----------------~v~iw~~~~~~~--~~~~~~--h~~~~--~~~~~~~~~l~s~~----~~~~~~~~~~~~ 138 (318)
T 4ggc_A 85 GTSSA----------------EVQLWDVQQQKR--LRNMTS--HSARV--GSLSWNSYILSSGS----RSGHIHHHDVRV 138 (318)
T ss_dssp EETTS----------------EEEEEETTTTEE--EEEEEC--CSSCE--EEEEEETTEEEEEE----TTSEEEEEETTS
T ss_pred EECCC----------------cEEEeecCCcee--EEEecC--ccceE--EEeecCCCEEEEEe----cCCceEeeecCC
Confidence 66433 688899887632 222222 22222 35677888776432 224667777765
Q ss_pred CCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCC-ceEeecCCCCceeEEEEE-e
Q psy4818 285 LPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN-WKTLIPEDENRTLDVVAA-V 361 (734)
Q Consensus 285 ~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~-~ 361 (734)
+. .....+......... .++++|+.++..+. +..|.++|+.+++... ........ ...+....+ .
T Consensus 139 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~ 206 (318)
T 4ggc_A 139 AE-------HHVATLSGHSQEVCGLRWAPDGRHLASGGN----DNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCP 206 (318)
T ss_dssp SS-------CEEEEEECCSSCEEEEEECTTSSEEEEEET----TSCEEEEESSCBTTBSCCSEEECCC-CSCEEEEEECT
T ss_pred Cc-------eeEEEEcCccCceEEEEEcCCCCEEEEEec----CcceeEEECCCCcccccceeeeccc-CCceEEEEecC
Confidence 21 111222222222222 37788887665443 2458889987654211 11122222 223333333 3
Q ss_pred eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..++..........+.+|+...+........ ...+....++++++.+++...+. -..++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~sg~~--d~~i~iwd~ 271 (318)
T 4ggc_A 207 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFA--QNQLVIWKY 271 (318)
T ss_dssp TSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEEETTTTEEEEEECTT--TCCEEEEET
T ss_pred CCCcEEEEEecCCCCEEEEEecccccccccccc-eeeeeeeeecccccceEEEEEcC--CCEEEEEEC
Confidence 334555555555556799999977665444332 23345566677777776543222 357899998
No 367
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.84 E-value=6.4e-06 Score=83.81 Aligned_cols=227 Identities=8% Similarity=0.052 Sum_probs=135.7
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC---ccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK---DYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~---~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+..+.|||||++|+..... ..|++|++.... .+... ........+.| +++.|+....+.
T Consensus 61 ~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~--------- 124 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKD-----TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDK--------- 124 (313)
T ss_dssp CEEEEEEETTTTEEEEEETT-----SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTS---------
T ss_pred cEEEEEECCCCCEEEEecCC-----CeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCC---------
Confidence 47889999999999876542 358888887643 22111 11122345666 677776655322
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.|.+++.+ +.+..+.. +......+.|+| ++++++.... ...|.+||... ...
T Consensus 125 -------~i~~~d~~----~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~----------~~~ 177 (313)
T 3odt_A 125 -------TAKVWKEG----SLVYNLQA--HNASVWDAKVVSFSENKFLTASA----DKTIKLWQNDK----------VIK 177 (313)
T ss_dssp -------EEEEEETT----EEEEEEEC--CSSCEEEEEEEETTTTEEEEEET----TSCEEEEETTE----------EEE
T ss_pred -------CEEEEcCC----cEEEeccc--CCCceeEEEEccCCCCEEEEEEC----CCCEEEEecCc----------eEE
Confidence 67777721 12222222 233456788888 8888875432 25788898443 112
Q ss_pred eeec-cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 298 TVIP-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 298 ~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
.+.. ....... .|++++. ++..+. +..|..+|+.++. ....+... ...+..+.+..++. +++...+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~----dg~i~i~d~~~~~---~~~~~~~~-~~~i~~~~~~~~~~-l~~~~~d-- 245 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSN----DGLIKLVDMHTGD---VLRTYEGH-ESFVYCIKLLPNGD-IVSCGED-- 245 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEET----TSEEEEEETTTCC---EEEEEECC-SSCEEEEEECTTSC-EEEEETT--
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccC----CCeEEEEECCchh---hhhhhhcC-CceEEEEEEecCCC-EEEEecC--
Confidence 2222 1222223 3889877 544333 3469999998765 23333332 33455565655454 4445444
Q ss_pred eeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 376 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..|++||+.+++.+..+..+.+.+..+.+++++. ++ +.++ -..++.||+
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~---dg~i~iw~~ 294 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-II-VGSS---DNLVRIFSQ 294 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EE-EEET---TSCEEEEES
T ss_pred CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EE-EEeC---CCcEEEEeC
Confidence 5799999999988778877766788888999886 33 3333 247899998
No 368
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.82 E-value=1.1e-07 Score=100.26 Aligned_cols=209 Identities=12% Similarity=0.058 Sum_probs=112.4
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC---cc-cccccccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK---DY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~---~~-~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
...+..++|||||++|+.... + ..|++||+.+++ .. ...........+.|+||++.|+....+.
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~-d----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 122 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQ-D----RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR------- 122 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEET-T----SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-------
T ss_pred CceEEEEEEeCCCCEEEEEeC-C----CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC-------
Confidence 445889999999999887653 2 359999999887 21 1112222346899999999888776533
Q ss_pred CcccccCCcEEEEEECCCCCCCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC-
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF- 294 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~- 294 (734)
.|+++++.+..... ...+..+ +...+..+.|+|||++|+....+ ..|++||+..+.........
T Consensus 123 ---------~i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~ 188 (377)
T 3dwl_C 123 ---------VISVCYFEQENDWWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASV 188 (377)
T ss_dssp ---------CEEECCC-----CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESS----SCEEEEEECCSSCC-CCCSCS
T ss_pred ---------eEEEEEECCcccceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCC----CEEEEEEEEecccCCCccccc
Confidence 57888887654211 1222221 33466789999999998864432 56888998642110000000
Q ss_pred -----Cceeee---ccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCC--ceEeecCCCCceeEEEEEeeC
Q psy4818 295 -----PLKTVI---PGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKN--WKTLIPEDENRTLDVVAAVAN 363 (734)
Q Consensus 295 -----~~~~l~---~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~ 363 (734)
+...+. ......... |+|+|+.|+..+.. ..|..+|+.++.... ...+..+ ...+..+.+..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~ 262 (377)
T 3dwl_C 189 WGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD----SSVTIAYPSAPEQPPRALITVKLS--QLPLRSLLWANE 262 (377)
T ss_dssp SCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT----TEEC-CEECSTTSCEEECCCEECS--SSCEEEEEEEET
T ss_pred cccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC----CcEEEEECCCCCCcceeeEeecCC--CCceEEEEEcCC
Confidence 011111 122222333 99999987766543 468888987765200 1222222 234455555555
Q ss_pred CEEEEEEEeCCceeEEEEECC
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLN 384 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~ 384 (734)
+.+++....+ .+.+|+..
T Consensus 263 ~~~l~~~~~~---~~~~~~~~ 280 (377)
T 3dwl_C 263 SAIVAAGYNY---SPILLQGN 280 (377)
T ss_dssp TEEEEEESSS---SEEEECCC
T ss_pred CCEEEEEcCC---cEEEEEeC
Confidence 7777666443 34566653
No 369
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.82 E-value=6.1e-07 Score=95.01 Aligned_cols=241 Identities=12% Similarity=0.058 Sum_probs=139.7
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc------cccc--ccccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD------YPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~------~~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
+...+|||||++||... ....+.+||+.++.. .... ..........|+|++...+++...
T Consensus 111 v~~~~~s~~g~~las~~-----~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~------- 178 (380)
T 3iz6_a 111 VMECAFAPNGQSVACGG-----LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG------- 178 (380)
T ss_dssp CCCCEECTTSSEEEECC-----SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT-------
T ss_pred EEEEEECCCCCEEEEee-----CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC-------
Confidence 55689999999998533 335689999876431 1111 111123567899986654444432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEec---CCCCeeEEEEEEec-CCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEF---PNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~---~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
...|.+|++.++. .+..+.. ..+...+..+.|++ +++.|+- .+ ....|.+||+....
T Consensus 179 --------D~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-gs---~D~~v~~wd~~~~~----- 239 (380)
T 3iz6_a 179 --------DQTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSINSLNANMFIS-GS---CDTTVRLWDLRITS----- 239 (380)
T ss_dssp --------TSCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEECSSSCCEEEE-EE---TTSCEEEEETTTTC-----
T ss_pred --------CCcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEeecCCCCEEEE-EE---CCCeEEEEECCCCC-----
Confidence 1268888887764 2223321 12233456788876 7777663 32 22579999997411
Q ss_pred CCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-----CceeEEEEEeeCCE
Q psy4818 292 GKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAVANNK 365 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~ 365 (734)
.....+.......... |+|+|+.|+-.+. +..|..||+.++.. ...+..... ...+..+.+..++.
T Consensus 240 --~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 240 --RAVRTYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDMRTGHQ--LQVYNREPDRNDNELPIVTSVAFSISGR 311 (380)
T ss_dssp --CCCEEECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEETTTTEE--EEEECCCCSSSCCSSCSCSEEEECSSSS
T ss_pred --cceEEECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEECCCCcE--EEEecccccccccccCceEEEEECCCCC
Confidence 1222232333333333 9999987764433 34689999987641 111211110 11234455544466
Q ss_pred EEEEEEeCCceeEEEEECCCCceeeee----CCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 366 LIVHYIQNVRSVMDLHDLNTGKRLHSF----PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl~~g~~~~~l----~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++++...+ ..+++||+.+++....+ ....+.|..+.+++++..++ +.+.. ..+.+|++
T Consensus 312 ~l~~g~~d--g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~D---~~i~iW~~ 373 (380)
T 3iz6_a 312 LLFAGYSN--GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC-TGSWD---KNLKIWAF 373 (380)
T ss_dssp EEEEECTT--SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE-EECTT---SCEEEEEC
T ss_pred EEEEEECC--CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE-EeeCC---CCEEEEec
Confidence 66666555 47999999888766555 22356677888899887544 43332 36888888
No 370
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.81 E-value=3.9e-09 Score=117.32 Aligned_cols=126 Identities=20% Similarity=0.130 Sum_probs=83.9
Q ss_pred EEeEEEEEecccc---CCCCCcEEEEecCCCCCcC-CccccHHHHHHHHhcCeEEEEEecccCC-CCCchhhhccccccC
Q psy4818 471 RVPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKK 545 (734)
Q Consensus 471 ~i~~~~~~p~~~~---~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~~-~~g~~~~~~~~~~~~ 545 (734)
.+.+.++.|.... .+++.|+|||+|||..... ...+... .+..+.|++|+.+|||.+. ||...-. ....+
T Consensus 111 cL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~--~la~~~~~vvv~~~YRl~~~Gfl~~~~---~~~~~ 185 (574)
T 3bix_A 111 CLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGS--VLASYGNVIVITVNYRLGVLGFLSTGD---QAAKG 185 (574)
T ss_dssp CCEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSS---SSCCC
T ss_pred CCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCch--hhhccCCEEEEEeCCcCcccccCcCCC---CCCCC
Confidence 3667788887542 2356899999999854332 2234332 3333347999999999642 1111000 01122
Q ss_pred CCchhHHHHHHHHHHHcC---CCCCCcEEEEEcChHHHHHHHHHhcCC---CceeEEEEcCC
Q psy4818 546 QNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVG 601 (734)
Q Consensus 546 ~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~ 601 (734)
...+.|+.++++|+.++- -.||+||.|+|.|+||.+++.++.... .+|+.+|+.+|
T Consensus 186 n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 345889999999998752 269999999999999999999887543 68999998876
No 371
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.81 E-value=1.4e-06 Score=89.99 Aligned_cols=239 Identities=10% Similarity=0.040 Sum_probs=140.9
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...+..+.|||||++|+-... ...|++++...+....... .........|+++++.|+....+.
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~~-----d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~---------- 150 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGSW-----DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK---------- 150 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS----------
T ss_pred CCCEEEEEECCCCCEEEEEcc-----cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC----------
Confidence 345889999999999886543 2368999988776432221 111224678899999887665432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.+.++++.... ...............+.+++++...++.... ....|.+||+.++. ....+
T Consensus 151 ------~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~--------~~~~~ 211 (340)
T 4aow_A 151 ------TIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCK--------LKTNH 211 (340)
T ss_dssp ------CEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTE--------EEEEE
T ss_pred ------eEEEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCc--------eeeEe
Confidence 46666665432 1222222233355678899887644333222 22578999998721 12222
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeE
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 378 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 378 (734)
.......... |+|+|+.|+..+. +..|.++|+.+.. ....+... ..+..+.+.+++.++... .+ ..|
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~~---~~~~~~~~--~~v~~~~~~~~~~~~~~~-~d--~~i 279 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEGK---HLYTLDGG--DIINALCFSPNRYWLCAA-TG--PSI 279 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE---EEEEEECS--SCEEEEEECSSSSEEEEE-ET--TEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccCc---eeeeecCC--ceEEeeecCCCCceeecc-CC--CEE
Confidence 2222233333 8999987765443 3569999997654 12222222 334555555545555544 34 469
Q ss_pred EEEECCCCceeeeeCC---------CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 379 DLHDLNTGKRLHSFPL---------DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 379 ~~~dl~~g~~~~~l~~---------~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++||+.++..+..+.. ....|..+.++++++.++ +.+.. ..+++||+
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~D---g~v~iW~~ 335 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF-AGYTD---NLVRVWQV 335 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE-EEETT---SCEEEEEE
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE-EEeCC---CEEEEEeC
Confidence 9999976665444432 234577888899887554 43333 36889998
No 372
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.80 E-value=2.4e-07 Score=96.30 Aligned_cols=159 Identities=14% Similarity=0.105 Sum_probs=93.3
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc--ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~--~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
+++++++++.++-.. .. .+|+++|+++++.+....... ....++|+|||+.+++....
T Consensus 4 g~~~~~~~~~~v~~~-~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--------------- 63 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN-YP----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--------------- 63 (349)
T ss_dssp CCCCCTTCEEEEEEE-TT----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---------------
T ss_pred cccccCCCEEEEEeC-CC----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---------------
Confidence 456788887655433 22 379999999998653322121 24689999999988776521
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCC----CeeEEEEEEecCCcEEEEEEec--------CCCCceEEEEeCCCCCCCccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNG----RSLGLHSEVTDCGRYLLVSTSN--------NTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~----~~~~~~~~~SpDG~~l~~~~~~--------~~~~~~i~~~d~~~~~~~~l~ 291 (734)
...|+++++.++.. +........ ......+.|||||++|++.... ......|+++|++++....
T Consensus 64 ~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-- 139 (349)
T 1jmx_B 64 YGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-- 139 (349)
T ss_dssp TTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC--
T ss_pred CCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc--
Confidence 23789999876532 122222111 0112357999999999887632 0012589999998732110
Q ss_pred CCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 292 GKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 292 ~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
... .......... .|+|||+ +|+.++ .|+++|+++++
T Consensus 140 ---~~~-~~~~~~~~~~~~~s~dg~-l~~~~~------~i~~~d~~~~~ 177 (349)
T 1jmx_B 140 ---PVR-TFPMPRQVYLMRAADDGS-LYVAGP------DIYKMDVKTGK 177 (349)
T ss_dssp ---CSE-EEECCSSCCCEEECTTSC-EEEESS------SEEEECTTTCC
T ss_pred ---eee-eccCCCcccceeECCCCc-EEEccC------cEEEEeCCCCc
Confidence 111 1111111112 3899998 766321 29999987765
No 373
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.80 E-value=1.9e-07 Score=95.61 Aligned_cols=239 Identities=9% Similarity=0.003 Sum_probs=132.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.|+|||++|+|+...++ .|+.++. +|+............+++|++||+ |+.+.. .
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~----~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~---------------~ 105 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGR----RVLGWRE-DGTVDVLLDATAFTNGNAVDAQQR-LVHCEH---------------G 105 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTT----EEEEEET-TSCEEEEEESCSCEEEEEECTTSC-EEEEET---------------T
T ss_pred ccCCeEeCCCCEEEEEECCCC----EEEEEeC-CCCEEEEeCCCCccceeeECCCCC-EEEEEC---------------C
Confidence 568999999999888754433 5888898 454322122222236789999998 544432 1
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCC--eeEEEEEEecCCcEEEEEEec-C-------------CCCceEEEEeCCCCCC
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGR--SLGLHSEVTDCGRYLLVSTSN-N-------------TQGSDLHYFDLHSLPD 287 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~--~~~~~~~~SpDG~~l~~~~~~-~-------------~~~~~i~~~d~~~~~~ 287 (734)
...|++++.+ +. ...+....... ....++.++|||+. +++... + .....||++|.+++.
T Consensus 106 ~~~v~~~~~~-g~--~~~~~~~~~~~~~~~~~~i~~d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~- 180 (305)
T 3dr2_A 106 RRAITRSDAD-GQ--AHLLVGRYAGKRLNSPNDLIVARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP- 180 (305)
T ss_dssp TTEEEEECTT-SC--EEEEECEETTEECSCCCCEEECTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-
T ss_pred CCEEEEECCC-CC--EEEEEeccCCCccCCCCCEEECCCCCE-EEeCcCCCccccccccccccccCCCeEEEEcCCCCc-
Confidence 2367777764 21 11121111110 01235789999984 443110 0 012579999987632
Q ss_pred CcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCC--CCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCC
Q psy4818 288 GKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKN--APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 364 (734)
Q Consensus 288 ~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 364 (734)
+..+. +...... .|+|||+.||+..... ....+|+++++++..... ..++..........+....++
T Consensus 181 --------~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~-~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 181 --------LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHD-RRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp --------CEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEE-EEEEECCSSSCCCSEEECTTS
T ss_pred --------EEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccC-CeEEEECCCCCCCeEEECCCC
Confidence 22232 2222222 3899999888875432 113579999886532100 112211111122334444445
Q ss_pred EEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+++.. . ..|++++. +|+.+..+..+.+ +..+.++++++.++++.+. .+|.+++
T Consensus 251 ~lwv~~-~---~gv~~~~~-~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 251 WLWSSS-G---TGVCVFDS-DGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp CEEECC-S---SEEEEECT-TSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred CEEEec-C---CcEEEECC-CCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 666554 2 24999998 6887777766643 4455566788888876543 6888775
No 374
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.78 E-value=1.9e-07 Score=108.39 Aligned_cols=246 Identities=10% Similarity=0.019 Sum_probs=145.1
Q ss_pred CcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC--ccccc-ccccccCeeEEEcC--CcEEEEEEEecCCCCC
Q psy4818 140 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPEV-LKNVKFPSISWTHD--HKGFFYNQYCDINGTA 214 (734)
Q Consensus 140 ~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~--~~~~~-~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~ 214 (734)
+...+..++|||||++|+.+.. + ..|++||+.++. .+... .....+..+.|+|+ |+.|+....+.
T Consensus 8 H~~~V~~l~~s~dg~~latg~~-d----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg----- 77 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSS-D----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG----- 77 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEET-T----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-----
T ss_pred CcceeEEEEECCCCCeEEEEEC-C----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-----
Confidence 3455889999999999886653 2 369999987543 22211 12223468899998 88887776433
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
.|++|++.++.... +.....+...+..+.|+|+ |+.++.... ...|.+||+.++..
T Consensus 78 -----------~I~vwd~~~~~~~~--~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~----dg~I~vwdl~~~~~----- 135 (753)
T 3jro_A 78 -----------KVLIWKEENGRWSQ--IAVHAVHSASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGT----- 135 (753)
T ss_dssp -----------CEEEEEEETTEEEE--EEEECCCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCSSSC-----
T ss_pred -----------eEEEEECCCCcccc--cccccCCCCCeEEEEECCCCCCCEEEEEeC----CCcEEEEEeecCCC-----
Confidence 58888887653212 2222223445678999999 888875432 25899999987311
Q ss_pred CCCceeeeccccceEEE-EEe-------------cCCeEEEEeCCCCCCceEEEEecCCCCCC-CceEeecCCCCceeEE
Q psy4818 293 KFPLKTVIPGMDHHHEI-IAN-------------NGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDV 357 (734)
Q Consensus 293 ~~~~~~l~~~~~~~~~~-~s~-------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~ 357 (734)
.....+.......... |+| +++.++..+.. +.|..+|+.++... .....+... ...+..
T Consensus 136 -~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~ 209 (753)
T 3jro_A 136 -TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRD 209 (753)
T ss_dssp -CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETT----SCEEEEEEETTTTEEEEEEEECCC-SSCEEE
T ss_pred -cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECC----CeEEEEeccCCcccceeeeeecCC-CCcEEE
Confidence 1111222222222333 777 57777665543 35888888664310 011122222 344556
Q ss_pred EEEeeC---CEEEEEEEeCCceeEEEEECCCCcee---eeeC--CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 358 VAAVAN---NKLIVHYIQNVRSVMDLHDLNTGKRL---HSFP--LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 358 ~~~~~~---~~l~~~~~~~~~~~l~~~dl~~g~~~---~~l~--~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+.+..+ +.++++...++ .|++||+.+++.. .... ...+.+..+.+++++..++.. +. -+.++.||+
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~---Dg~I~vwd~ 283 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GG---DNKVTLWKE 283 (753)
T ss_dssp EEECCCCSSSEEEEEEESSS--CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CS---SSCEECCBC
T ss_pred EEeccCCCCCCEEEEEecCC--EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cC---CCEEEEEec
Confidence 666655 67777777664 6888998766421 1111 124556678888888765543 32 246888887
No 375
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.2e-06 Score=103.62 Aligned_cols=209 Identities=10% Similarity=0.010 Sum_probs=123.6
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
.+..++|||||++||..... ..|++||..+++.+........+..++|+| |+.|+-...+
T Consensus 19 ~V~~lafspdg~~lAsgs~D-----g~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D-------------- 78 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVT-----GEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAK-------------- 78 (902)
T ss_dssp CEEEEEEETTTTEEEEEETT-----SEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETT--------------
T ss_pred CcEEEEECCCCCEEEEEeCC-----CEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECc--------------
Confidence 47889999999999976542 379999998876433222222346899999 8866555432
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc---eee
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL---KTV 299 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~---~~l 299 (734)
..|.+|++.++. .+..+.. ...+..+.|+|||++|+.... ...|.+||+.++.........-+ ..+
T Consensus 79 --~~v~lWd~~~~~--~~~~~~~---~~~V~~v~~sp~g~~l~sgs~----dg~V~lwd~~~~~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 79 --DTVYVLSLYSQK--VLTTVFV---PGKITSIDTDASLDWMLIGLQ----NGSMIVYDIDRDQLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp --CEEEEEETTTCS--EEEEEEC---SSCEEEEECCTTCSEEEEEET----TSCEEEEETTTTEEEEEEECCHHHHHTCS
T ss_pred --CeEEEEECCCCc--EEEEEcC---CCCEEEEEECCCCCEEEEEcC----CCcEEEEECCCCccccceecccccccccc
Confidence 279999998753 2222322 235678999999999986432 25799999987311000000000 000
Q ss_pred eccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC----------------CCCceeEEEEEee
Q psy4818 300 IPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE----------------DENRTLDVVAAVA 362 (734)
Q Consensus 300 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~~~~~ 362 (734)
.......... |+|++..+++.+.. +..+ +||+.++.. ...+..+ .....+..+.+..
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~---dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYE---YVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECS---SCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeC---CCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 1111222233 89865444444433 3458 999987541 1222211 0013355666655
Q ss_pred CCEEEEEEEeCCceeEEEEECCCCceee
Q psy4818 363 NNKLIVHYIQNVRSVMDLHDLNTGKRLH 390 (734)
Q Consensus 363 ~~~l~~~~~~~~~~~l~~~dl~~g~~~~ 390 (734)
++..+++...++ .|.+||+.+|+.+.
T Consensus 222 dg~~lasgs~Dg--~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 222 NSLHIITIHEDN--SLVFWDANSGHMIM 247 (902)
T ss_dssp TSSEEEEEETTC--CEEEEETTTCCEEE
T ss_pred CCCEEEEEECCC--eEEEEECCCCcEEE
Confidence 566777776664 79999998887644
No 376
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.76 E-value=7.7e-07 Score=96.12 Aligned_cols=207 Identities=12% Similarity=0.101 Sum_probs=115.7
Q ss_pred EEeeEEeCCCC--cEEEEEEeCCCCceEEEEEEECCCCCccc--------------------------------------
Q psy4818 143 ALKLYAFSDNG--KHFAYCLSKSGSDWNTLHIKDVDTGKDYP-------------------------------------- 182 (734)
Q Consensus 143 ~~~~~~~SPDG--~~la~~~~~~g~~~~~l~v~dl~~g~~~~-------------------------------------- 182 (734)
.+..++|+|++ .+|+.+.. . ..|++||+.++....
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~-d----~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTN-D----KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPR 169 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEEC-S----SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEE
T ss_pred ceEEEEEcCCCCcceEEEeCC-C----CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccce
Confidence 37789999999 67776543 3 358888876643210
Q ss_pred ---ccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEE-----ecCCCCeeEEE
Q psy4818 183 ---EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV-----EFPNGRSLGLH 254 (734)
Q Consensus 183 ---~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~-----~~~~~~~~~~~ 254 (734)
.......+..++|+|||+.|+.. .+. .|.+|++.+... ...++ ....+...+..
T Consensus 170 ~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~----------------~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~ 231 (447)
T 3dw8_B 170 RIFANAHTYHINSISINSDYETYLSA-DDL----------------RINLWHLEITDR-SFNIVDIKPANMEELTEVITA 231 (447)
T ss_dssp EEECSCCSSCCCEEEECTTSSEEEEE-CSS----------------EEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEE
T ss_pred EEeccCCCcceEEEEEcCCCCEEEEe-CCC----------------eEEEEECCCCCc-eeeeeecccccccccCcceEE
Confidence 01111234688999999988765 322 688888874221 11111 11123335678
Q ss_pred EEEecCC-cEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecccc------------ceEEE-EEecCCeEEEE
Q psy4818 255 SEVTDCG-RYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD------------HHHEI-IANNGPELIVK 320 (734)
Q Consensus 255 ~~~SpDG-~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~------------~~~~~-~s~dg~~l~~~ 320 (734)
+.|+|+| +.|+.... ...|.+||+.++.... .....+..... ..... |+|+|+.|+..
T Consensus 232 ~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSS----KGTIRLCDMRASALCD----RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp EEECSSCTTEEEEEET----TSCEEEEETTTCSSSC----TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCcEEEEEeC----CCeEEEEECcCCcccc----ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 9999999 77664432 2579999998732100 00122222111 23333 99999877754
Q ss_pred eCCCCCCceEEEEecCC-CCCCCceEeecCCC-Cc---------e---eEEEEEeeCCEEEEEEEeCCceeEEEEECCCC
Q psy4818 321 TTKNAPKGKVVTINLNN-PCEKNWKTLIPEDE-NR---------T---LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG 386 (734)
Q Consensus 321 s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~-~~---------~---~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g 386 (734)
+. ..|..||+.+ +.. ...+..+.. .. . ...+.+..++..+++...+ ..|++||+.++
T Consensus 304 ~~-----~~v~iwd~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d--g~v~iwd~~~~ 374 (447)
T 3dw8_B 304 DY-----LSVKVWDLNMENRP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN--NFFRMFDRNTK 374 (447)
T ss_dssp ES-----SEEEEEETTCCSSC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST--TEEEEEETTTC
T ss_pred eC-----CeEEEEeCCCCccc--cceeeccccccccccccccccccccceEEEECCCCCEEEEeccC--CEEEEEEcCCC
Confidence 33 4689999875 331 222222210 00 0 0013344435555666555 47999999887
Q ss_pred cee
Q psy4818 387 KRL 389 (734)
Q Consensus 387 ~~~ 389 (734)
+.+
T Consensus 375 ~~~ 377 (447)
T 3dw8_B 375 RDI 377 (447)
T ss_dssp CEE
T ss_pred cce
Confidence 754
No 377
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.74 E-value=2.4e-06 Score=88.45 Aligned_cols=244 Identities=7% Similarity=-0.016 Sum_probs=128.5
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc--cccc-c--cccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD--YPEV-L--KNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~--~~~~-~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
..+..+.|||| +||-... . ..|++||+.++.. +... . ....+..++|+|||+.|+-...+.
T Consensus 15 ~~v~~~~~s~~--~las~~~-D----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~------- 80 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGST-D----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS------- 80 (330)
T ss_dssp SCEEEEEEETT--EEEEEES-S----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS-------
T ss_pred CceeeeccCCC--EEEEEcC-C----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC-------
Confidence 34678899998 5554432 2 3699999987642 1111 1 122346799999999887666433
Q ss_pred CcccccCCcEEEEEECCCCCC---CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQD---KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~---~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++..... ....+.....+...+..++|||||++|+-... ...|++||+...... .
T Consensus 81 ---------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~----D~~v~iwd~~~~~~~-~--- 143 (330)
T 2hes_X 81 ---------TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR----DKSVWIWETDESGEE-Y--- 143 (330)
T ss_dssp ---------CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET----TSCEEEEECCTTCCC-C---
T ss_pred ---------cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEeccCCCCC-e---
Confidence 577777753211 11122222223445678999999999874332 257999998541110 0
Q ss_pred CCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC--CEEEEEE
Q psy4818 294 FPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN--NKLIVHY 370 (734)
Q Consensus 294 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~l~~~~ 370 (734)
.....+.......... |+|+++.|+-.+.. ..|..|++.++... ....+... ...+..+.+..+ ...+++.
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~i~iW~~~~~~~~-~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHPSEALLASSSYD----DTVRIWKDYDDDWE-CVAVLNGH-EGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp EEEEEECCCSSCEEEEEECSSSSEEEEEETT----SCEEEEEEETTEEE-EEEEECCC-SSCEEEEEECCSSSSCEEEEE
T ss_pred EEEEEeccCCCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCCee-EEEEccCC-CCcEEEEEecCCCCeeEEEEE
Confidence 0011122222223333 89998876654432 34777776544210 11222222 233444545443 3456666
Q ss_pred EeCCceeEEEEECCCC--------ceeeeeCC-CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 371 IQNVRSVMDLHDLNTG--------KRLHSFPL-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 371 ~~~~~~~l~~~dl~~g--------~~~~~l~~-~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
..+ ..|.+|++.++ .....+.. ....+..+.+++++ ++++.+.. ..+.++|.
T Consensus 218 s~D--~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~d---g~v~iw~~ 278 (330)
T 2hes_X 218 SDD--STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGAD---GVLAVYEE 278 (330)
T ss_dssp ETT--SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETT---SCEEEEEE
T ss_pred eCC--CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCC---CEEEEEEc
Confidence 666 36778877433 12223332 34556677777543 34444332 36778887
No 378
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=8.2e-06 Score=90.48 Aligned_cols=250 Identities=12% Similarity=0.099 Sum_probs=141.4
Q ss_pred EeeEEeC----CCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cc-----------cccCeeEEEcCCcEEEEEEE
Q psy4818 144 LKLYAFS----DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KN-----------VKFPSISWTHDHKGFFYNQY 207 (734)
Q Consensus 144 ~~~~~~S----PDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~-----------~~~~~~~wSpDg~~l~y~~~ 207 (734)
-.++.+| |||++++.+....+ ++.|+|..+.+.+.... .+ .+...+..|+++..+++...
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~----~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPP----QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETT----EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CceeEEccccCCCCCEEEEEEccCC----eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 3478999 79999887665443 68899999888654211 11 12346777888876655442
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCC
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 287 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~ 287 (734)
+ ..+|++++..+.. ...+..... ..+..+..|+|||+++++.... .+.|.++|++++.
T Consensus 318 -~--------------~g~v~~vd~~~~~--~~~v~~i~~-~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~k- 375 (567)
T 1qks_A 318 -E--------------TGKILLVDYTDLN--NLKTTEISA-ERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK- 375 (567)
T ss_dssp -T--------------TTEEEEEETTCSS--EEEEEEEEC-CSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE-
T ss_pred -C--------------CCeEEEEecCCCc--cceeeeeec-cccccCceECCCCCEEEEEeCC---CCeEEEEECCCCc-
Confidence 1 2378888875432 112222211 1245578899999998876532 3689999998832
Q ss_pred CcccCCCCceeeec--c----ccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC--CCceE--eecCCCCceeEE
Q psy4818 288 GKISGKFPLKTVIP--G----MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE--KNWKT--LIPEDENRTLDV 357 (734)
Q Consensus 288 ~~l~~~~~~~~l~~--~----~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~--l~~~~~~~~~~~ 357 (734)
+ ...+. + ...+...+.|+++.+|++++.. ...|.+++.++.+. ..|+. .++......+.-
T Consensus 376 --l------~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i 445 (567)
T 1qks_A 376 --L------VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFI 445 (567)
T ss_dssp --E------EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE
T ss_pred --E------EEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEE
Confidence 1 11111 1 1122333577777777666543 34588888875321 11332 222211111111
Q ss_pred EEEeeCCEEEEEEEeCC----ceeEEEEECCCC-----ce-eeeeC------CC--CceEEeeccCcccceEEEEE-ecC
Q psy4818 358 VAAVANNKLIVHYIQNV----RSVMDLHDLNTG-----KR-LHSFP------LD--LGQITHISGRRKYNEVFYGF-TSF 418 (734)
Q Consensus 358 ~~~~~~~~l~~~~~~~~----~~~l~~~dl~~g-----~~-~~~l~------~~--~g~v~~~~~~~d~~~l~~~~-ss~ 418 (734)
...+++.++++...-+. ...|.++|+++. +. .+.+. ++ ...+..+.++++|++++++. +.-
T Consensus 446 ~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~ 525 (567)
T 1qks_A 446 KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGK 525 (567)
T ss_dssp ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCT
T ss_pred EeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCC
Confidence 12234346665442221 347999998655 21 12332 11 22455788899999999874 322
Q ss_pred CCCceEEEEeC
Q psy4818 419 LQPGTIYHCNI 429 (734)
Q Consensus 419 ~~P~~~~~~d~ 429 (734)
.....|.++|.
T Consensus 526 ~~~~~i~v~D~ 536 (567)
T 1qks_A 526 DQESALVVVDD 536 (567)
T ss_dssp TSCCEEEEEET
T ss_pred CCCCcEEEEEC
Confidence 34578999998
No 379
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.72 E-value=2.2e-06 Score=91.00 Aligned_cols=205 Identities=11% Similarity=0.116 Sum_probs=120.9
Q ss_pred EEEeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--------------cccccCeeEEEc-CCcEEEEE
Q psy4818 142 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------KNVKFPSISWTH-DHKGFFYN 205 (734)
Q Consensus 142 ~~~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--------------~~~~~~~~~wSp-Dg~~l~y~ 205 (734)
..+..++||| ||++||.... . ..|++||+.+++...... ....+..+.|+| +++.|+..
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS-D----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET-T----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcC-C----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 3478899999 9999987654 2 359999999887533211 222346889999 55555544
Q ss_pred EEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC---CcEEEEEEecCCCCceEEEEeC
Q psy4818 206 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC---GRYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD---G~~l~~~~~~~~~~~~i~~~d~ 282 (734)
..+ ..|.+|++.+... +..+... .....+.++|+ +.+++.... ...|++||+
T Consensus 119 ~~d----------------~~i~iwd~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~d~ 173 (408)
T 4a11_B 119 SFD----------------KTLKVWDTNTLQT--ADVFNFE---ETVYSHHMSPVSTKHCLVAVGTR----GPKVQLCDL 173 (408)
T ss_dssp ETT----------------SEEEEEETTTTEE--EEEEECS---SCEEEEEECSSCSSCCEEEEEES----SSSEEEEES
T ss_pred eCC----------------CeEEEeeCCCCcc--ceeccCC---CceeeeEeecCCCCCcEEEEEcC----CCeEEEEeC
Confidence 432 2688999887542 2233322 23456788875 446665432 257999999
Q ss_pred CCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec-------------
Q psy4818 283 HSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP------------- 348 (734)
Q Consensus 283 ~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~------------- 348 (734)
.++. ....+.......... |+|+++.+++.+..+ ..|..+|+.+... ....+-.
T Consensus 174 ~~~~--------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 174 KSGS--------CSHILQGHRQEILAVSWSPRYDYILATASAD---SRVKLWDVRRASG-CLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp SSSC--------CCEEECCCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSS
T ss_pred CCcc--------eeeeecCCCCcEEEEEECCCCCcEEEEEcCC---CcEEEEECCCCCc-ccccccccccccceeecccc
Confidence 8731 222232222333333 899998765555432 4588899865431 1111100
Q ss_pred CCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceee
Q psy4818 349 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH 390 (734)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~ 390 (734)
......+..+.+..++..+++...+ ..|.+||+.+++...
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTD--NRMRLWNSSNGENTL 281 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTCCBCC
T ss_pred ccccCceeEEEEcCCCCEEEEecCC--CeEEEEECCCCccce
Confidence 1112344555555545566666555 469999998877543
No 380
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.71 E-value=2e-08 Score=108.00 Aligned_cols=114 Identities=11% Similarity=0.042 Sum_probs=79.5
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHH-HHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|+||++||..+.. ...|...+.. ++.+.||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~---~~~~~-~~~~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE---YTQAS-YNTRVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC---HHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCc---hhHhH-hhHHHHHHHHHHHHHHHHHhc
Confidence 35678999999987654 2345443334 444349999999999965432 11110 111123457777788886543
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
-++.+++.|+|||+||.+++.++.++|++++++|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 3567899999999999999999999999999999877643
No 381
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.71 E-value=6.5e-07 Score=92.08 Aligned_cols=243 Identities=11% Similarity=-0.004 Sum_probs=131.7
Q ss_pred cEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCc--ccc-cccccccCeeEEEc--CCcEEEEEEEecCCCCCC
Q psy4818 141 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD--YPE-VLKNVKFPSISWTH--DHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 141 ~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~--~~~-~~~~~~~~~~~wSp--Dg~~l~y~~~~~~~~~~~ 215 (734)
...+..++|||||++||-... ...|++||+.++.. +.. ......+..++|+| +|+.|+-...+.
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~-----D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~------ 81 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSS-----DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR------ 81 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEET-----TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS------
T ss_pred cCeEEEeeEcCCCCEEEEEeC-----CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC------
Confidence 345788999999999986543 24799999988752 111 11122346789986 477776665432
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
.|.+|++.++.......+. .+...+..++|+|| |++|+... ....|.+||+.++....
T Consensus 82 ----------~v~iWd~~~~~~~~~~~~~--~h~~~V~~v~~~p~~~g~~lasgs----~D~~i~lwd~~~~~~~~---- 141 (316)
T 3bg1_A 82 ----------KVIIWREENGTWEKSHEHA--GHDSSVNSVCWAPHDYGLILACGS----SDGAISLLTYTGEGQWE---- 141 (316)
T ss_dssp ----------CEEEECCSSSCCCEEEEEC--CCSSCCCEEEECCTTTCSCEEEEC----SSSCEEEEEECSSSCEE----
T ss_pred ----------EEEEEECCCCcceEEEEcc--CCCCceEEEEECCCCCCcEEEEEc----CCCCEEEEecCCCCCcc----
Confidence 6888888765322222222 23334567899998 77776322 22578888887621100
Q ss_pred CCceeeecccc-ceEE-EEEecC-----------------CeEEEEeCCCCCCceEEEEecCCCCCCCceEe--ecCCCC
Q psy4818 294 FPLKTVIPGMD-HHHE-IIANNG-----------------PELIVKTTKNAPKGKVVTINLNNPCEKNWKTL--IPEDEN 352 (734)
Q Consensus 294 ~~~~~l~~~~~-~~~~-~~s~dg-----------------~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~~ 352 (734)
......... .... .|+|++ +.|+ .. +.+..|.+||+.+.. .++.+ +... .
T Consensus 142 --~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg---s~D~~v~lWd~~~~~--~~~~~~~l~~h-~ 212 (316)
T 3bg1_A 142 --VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA-SG---GCDNLIKLWKEEEDG--QWKEEQKLEAH-S 212 (316)
T ss_dssp --ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE-CC---BTTSBCCEEEECTTS--CEEEEECCBCC-S
T ss_pred --eeeeeccccCCcceEEEccccCCccccccccccCccccceEE-Ee---cCCCeEEEEEeCCCC--ccceeeecccC-C
Confidence 000111111 1111 266652 3333 22 223457777775432 12221 2222 2
Q ss_pred ceeEEEEEeeCC----EEEEEEEeCCceeEEEEECCCC---ce-eeeeCCCCceEEeeccCcccceEEEEEecCCCCceE
Q psy4818 353 RTLDVVAAVANN----KLIVHYIQNVRSVMDLHDLNTG---KR-LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 424 (734)
Q Consensus 353 ~~~~~~~~~~~~----~l~~~~~~~~~~~l~~~dl~~g---~~-~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~ 424 (734)
..+..+.+..++ .++++...+ ..|.+|++.++ +. .+.+....+.+..+.++|++..++.... . ..+
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D--~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~-D---~~v 286 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQD--GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG-D---NKV 286 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETT--CEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES-S---SCE
T ss_pred CceEEEEecCCCCCCCceEEEEcCC--CeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC-C---CeE
Confidence 345555554422 567777766 47888998652 11 1223222456778889999876654432 2 246
Q ss_pred EEEeC
Q psy4818 425 YHCNI 429 (734)
Q Consensus 425 ~~~d~ 429 (734)
.+|+.
T Consensus 287 ~lw~~ 291 (316)
T 3bg1_A 287 TLWKE 291 (316)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66765
No 382
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.68 E-value=3.8e-07 Score=100.58 Aligned_cols=246 Identities=11% Similarity=0.012 Sum_probs=138.5
Q ss_pred EEeeEEeCCCC---------cEEEEEEeCC--------------CCceEEEEEEECCCCCccc---cccc--ccccCeeE
Q psy4818 143 ALKLYAFSDNG---------KHFAYCLSKS--------------GSDWNTLHIKDVDTGKDYP---EVLK--NVKFPSIS 194 (734)
Q Consensus 143 ~~~~~~~SPDG---------~~la~~~~~~--------------g~~~~~l~v~dl~~g~~~~---~~~~--~~~~~~~~ 194 (734)
.+..++|+|++ ++||.+.... ++....|.+||+++++... .++. ...+..++
T Consensus 135 ~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~ 214 (524)
T 2j04_B 135 LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLK 214 (524)
T ss_dssp --CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEE
T ss_pred ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEE
Confidence 36678888887 7888766432 3445689999998876421 1111 12236789
Q ss_pred EEcC------CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCC---------CeeEEecCCCCeeEEEEEEec
Q psy4818 195 WTHD------HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK---------DIPVVEFPNGRSLGLHSEVTD 259 (734)
Q Consensus 195 wSpD------g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~---------~~~v~~~~~~~~~~~~~~~Sp 259 (734)
|+|+ ++.|+-...+. .|.+|++.++... ....+.. +...+..++|+|
T Consensus 215 wsp~~~~~~~~~~LAs~s~Dg----------------tvrlWd~~~~~~~~~~~~~~~~p~~~l~~--h~~~v~sv~~s~ 276 (524)
T 2j04_B 215 WHEGCHAPHLVGCLSFVSQEG----------------TINFLEIIDNATDVHVFKMCEKPSLTLSL--ADSLITTFDFLS 276 (524)
T ss_dssp ECSSCCCSSSSCEEEEEETTS----------------CEEEEECCCCSSSSSEEECCCSCSEEECC--TTTCEEEEEESS
T ss_pred ECCCCCCCCCCceEEEEecCC----------------eEEEEEcCCCccccccceeecCceEEEEc--CCCCEEEEEecC
Confidence 9997 45565555332 5788888654321 0112222 233567899998
Q ss_pred CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE---EEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 260 CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI---IANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 260 DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~---~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
++ .|+ +.+ ....|.+||+.++. .+...+..+....... ++++|..+++.+.. +..|.+||+.
T Consensus 277 ~~-~la-sgs---~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~---D~tvklWD~~ 341 (524)
T 2j04_B 277 PT-TVV-CGF---KNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV---DGYFYIFNPK 341 (524)
T ss_dssp SS-EEE-EEE---TTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET---TSEEEEECGG
T ss_pred CC-eEE-EEe---CCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEecc---CCeEEEEECC
Confidence 75 454 322 23689999998731 1222222222333332 46676344444333 3569999987
Q ss_pred CCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEe
Q psy4818 337 NPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~s 416 (734)
++.. ...+..+.....+..+.+..++..+++...+ ..+.+||+.++..+..+....+.|.+++++|++..++ +.+
T Consensus 342 ~~~~--~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d--~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~-Sgs 416 (524)
T 2j04_B 342 DIAT--TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA--SSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL-AGS 416 (524)
T ss_dssp GHHH--HCEEEEECSCCSCCCEEEETTTTEEEEECSS--SEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE-EEE
T ss_pred CCCc--ccccccccccCcccceEeCCCcCeEEEeCCC--CcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE-EEE
Confidence 6431 1223222211112233344434455555444 4699999988876566665667788999999987554 443
Q ss_pred cCCCCceEEEEeC
Q psy4818 417 SFLQPGTIYHCNI 429 (734)
Q Consensus 417 s~~~P~~~~~~d~ 429 (734)
.. ..+.++|+
T Consensus 417 ~D---gtv~lwd~ 426 (524)
T 2j04_B 417 AD---GSLIITNA 426 (524)
T ss_dssp TT---TEEECCBS
T ss_pred CC---CEEEEEec
Confidence 33 46888887
No 383
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.67 E-value=3.5e-08 Score=106.09 Aligned_cols=114 Identities=11% Similarity=-0.001 Sum_probs=78.5
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHHHHHh-cCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|+||++||..+.. ...|...+...|.+ .||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~---~~~~~-~~~~~~~~dl~~~i~~L~~~~ 141 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAE---YTQAV-QNIRIVGAETAYLIQQLLTEL 141 (452)
T ss_dssp CTTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC---HHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccc---cHHHH-HhHHHHHHHHHHHHHHHHHhc
Confidence 45578999999976554 23354433344443 49999999999965432 11110 011122456777778876543
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCcc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 603 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 603 (734)
-++.+++.|+|||+||.+++.++.++|++++.+|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 142 SYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 3457899999999999999999999999999999877653
No 384
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.66 E-value=1.9e-05 Score=82.79 Aligned_cols=209 Identities=12% Similarity=0.062 Sum_probs=104.3
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC-CCCCCCeeEEecCCCCeeEEEEEEecCCcEEE-EE
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG-TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLL-VS 267 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~-~~ 267 (734)
...++|||||+.||.+.. . .|.++++. ++.. +.+...+... ....+++||||++|+ +.
T Consensus 42 ~~~~a~spdg~~l~~~~~--------------~---~v~~~~~~~~g~~--~~~~~~~~~g-~~~~~~~spdg~~l~~~~ 101 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAM--------------K---KWSSFAVKSPTEI--VHEASHPIGG-HPRANDADTNTRAIFLLA 101 (365)
T ss_dssp CSEEEECTTSSEEEEEEB--------------T---EEEEEEEEETTEE--EEEEEEECCS-SGGGGCTTSCCEEEEEEE
T ss_pred CcEEEECCCCCEEEEEcc--------------c---eEEEEEECCCCCE--EEeeEeecCC-CCccEEECCCCCEEEEEE
Confidence 467899999998865542 1 57777765 3321 1122211000 112478999999754 33
Q ss_pred Ee------cCC----CCceEEEEeCCCCCCCcccCCCCceeee--ccccceEE-EEEecCCeEEEEeCCCCCCceEEEEe
Q psy4818 268 TS------NNT----QGSDLHYFDLHSLPDGKISGKFPLKTVI--PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTIN 334 (734)
Q Consensus 268 ~~------~~~----~~~~i~~~d~~~~~~~~l~~~~~~~~l~--~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 334 (734)
.+ ... ....+.+++++. .. .+. ...... ........ .|+|||+++|+. +.. ...|++++
T Consensus 102 ~~~~~~~~~~~~~~~~~g~v~v~~~~~-~g-~~~---~~~~~~~~~~~~~~~~~~~spdG~~l~~~-~~~--~~~v~~~~ 173 (365)
T 1jof_A 102 AKQPPYAVYANPFYKFAGYGNVFSVSE-TG-KLE---KNVQNYEYQENTGIHGMVFDPTETYLYSA-DLT--ANKLWTHR 173 (365)
T ss_dssp CSSTTCCEEEEEESSSCCEEEEEEECT-TC-CEE---EEEEEEECCTTCCEEEEEECTTSSEEEEE-ETT--TTEEEEEE
T ss_pred ecCCcceeccceeecCCceEEEEccCC-CC-cCc---ceEeeEEeCCCCcceEEEECCCCCEEEEE-cCC--CCEEEEEE
Confidence 32 010 224577777753 10 110 000111 01112222 399999987654 332 24688898
Q ss_pred cC-CCCCCCceEe--ec-CCCCceeEEEEEeeCC-EEEEEEEeCCceeEEEEECCCCcee---eeeC-CCC---c-----
Q psy4818 335 LN-NPCEKNWKTL--IP-EDENRTLDVVAAVANN-KLIVHYIQNVRSVMDLHDLNTGKRL---HSFP-LDL---G----- 397 (734)
Q Consensus 335 ~~-~~~~~~~~~l--~~-~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~~dl~~g~~~---~~l~-~~~---g----- 397 (734)
++ +++ ...+ +. .........+.+..++ .+++....++.-.++.++.++|+.. +.+. .+. +
T Consensus 174 ~~~~g~---~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~ 250 (365)
T 1jof_A 174 KLASGE---VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPET 250 (365)
T ss_dssp ECTTSC---EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTT
T ss_pred ECCCCC---EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccc
Confidence 87 554 2221 11 1102223444454434 5555433333233444455467642 2221 221 1
Q ss_pred ----eEEeec-cCcccceEEEEEecCC--CCceEEEEeC
Q psy4818 398 ----QITHIS-GRRKYNEVFYGFTSFL--QPGTIYHCNI 429 (734)
Q Consensus 398 ----~v~~~~-~~~d~~~l~~~~ss~~--~P~~~~~~d~ 429 (734)
.+..+. ++||++.++++..... .|..+.+|++
T Consensus 251 ~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 251 GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred ccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 466788 8999988876543322 2457888887
No 385
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.66 E-value=1.2e-05 Score=87.34 Aligned_cols=234 Identities=11% Similarity=0.083 Sum_probs=133.3
Q ss_pred EEeeEEeC--CCCcEEEEEEeCCCCceEEEEEEECCCCCcccc----------------------cccccccCeeEEEcC
Q psy4818 143 ALKLYAFS--DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----------------------VLKNVKFPSISWTHD 198 (734)
Q Consensus 143 ~~~~~~~S--PDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~----------------------~~~~~~~~~~~wSpD 198 (734)
.+..+.|+ ||+++|+.... . ..|++||+.++..... ...+....-..++++
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~-d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 279 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSR-D----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH 279 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEET-T----SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEE
T ss_pred ccEEEEEecCCCCCEEEEEcC-C----CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCC
Confidence 35556666 68888776553 2 3699999988764321 011111123466889
Q ss_pred CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEE
Q psy4818 199 HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLH 278 (734)
Q Consensus 199 g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~ 278 (734)
++.|+....+. .|+++++.+.. .+.....+...+..+.|+|||++|+.... ...|+
T Consensus 280 ~~~l~~~~~d~----------------~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~sg~~----dg~i~ 335 (464)
T 3v7d_B 280 GNIVVSGSYDN----------------TLIVWDVAQMK----CLYILSGHTDRIYSTIYDHERKRCISASM----DTTIR 335 (464)
T ss_dssp TTEEEEEETTS----------------CEEEEETTTTE----EEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEE
T ss_pred CCEEEEEeCCC----------------eEEEEECCCCc----EEEEecCCCCCEEEEEEcCCCCEEEEEeC----CCcEE
Confidence 98887766432 68889987653 22222233445678999999999875432 25799
Q ss_pred EEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEE
Q psy4818 279 YFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 358 (734)
Q Consensus 279 ~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~ 358 (734)
+||+.++. ....+. +.......+..+++.++..+. +..|..+|+.+.. ........ ......
T Consensus 336 vwd~~~~~--------~~~~~~-~h~~~v~~~~~~~~~l~s~s~----dg~v~vwd~~~~~---~~~~~~~~--~~~~~~ 397 (464)
T 3v7d_B 336 IWDLENGE--------LMYTLQ-GHTALVGLLRLSDKFLVSAAA----DGSIRGWDANDYS---RKFSYHHT--NLSAIT 397 (464)
T ss_dssp EEETTTTE--------EEEEEC-CCSSCEEEEEECSSEEEEEET----TSEEEEEETTTCC---EEEEEECT--TCCCEE
T ss_pred EEECCCCc--------EEEEEe-CCCCcEEEEEEcCCEEEEEeC----CCcEEEEECCCCc---eeeeecCC--CCccEE
Confidence 99998731 122222 222223334445666554443 3469999998754 12222222 222333
Q ss_pred EEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC-CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 359 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 359 ~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~-~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+..++.+++... + ..+++||+.+|+.++.+. ...+.+..+.++ ++.+++..+... ...++.+|.
T Consensus 398 ~~~~~~~~l~~~~-d--g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g-~~~i~~ldf 463 (464)
T 3v7d_B 398 TFYVSDNILVSGS-E--NQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVEKDG-QSFLEILDF 463 (464)
T ss_dssp EEEECSSEEEEEE-T--TEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEEETT-EEEEEEEEC
T ss_pred EEEeCCCEEEEec-C--CeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEEeCC-eEEEEEeec
Confidence 3333355666555 4 479999999998776533 335667677664 556666554432 233445443
No 386
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.64 E-value=7e-06 Score=85.83 Aligned_cols=233 Identities=10% Similarity=0.045 Sum_probs=140.8
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..+..++|||||++||...+. .+.+||+++++.+...... ......|+++++.++.+...
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~------~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------- 79 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK------SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGV------------- 79 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS------EEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSS-------------
T ss_pred CceEEEEECCCCCEEEEEcCC------EEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECC-------------
Confidence 347789999999999865431 2678998877643211111 23578899999988776532
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...|.+|++.++.. +..+.. ...+..+.+++++..++ . ...|++||+.++. ..+ ..+..
T Consensus 80 --d~~v~iWd~~~~~~--~~~~~~---~~~v~~v~~~~~~~~~~--~-----~~~i~i~d~~~~~-~~~------~~~~~ 138 (355)
T 3vu4_A 80 --KEVVHIWDDVKKQD--VSRIKV---DAPVKDLFLSREFIVVS--Y-----GDVISVFKFGNPW-KRI------TDDIR 138 (355)
T ss_dssp --TTEEEEEETTTTEE--EEEEEC---SSCEEEEEECSSEEEEE--E-----TTEEEEEESSTTC-CBS------SCCEE
T ss_pred --ccEEEEEECCCCcE--EEEEEC---CCceEEEEEcCCEEEEE--E-----cCEEEEEECCCCc-eee------EEecc
Confidence 12789999876532 222222 22456788888753332 1 2579999998731 111 11111
Q ss_pred cccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCC-----C--------C-ceEeecCCCCceeEEEEEeeCCEEE
Q psy4818 302 GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE-----K--------N-WKTLIPEDENRTLDVVAAVANNKLI 367 (734)
Q Consensus 302 ~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-----~--------~-~~~l~~~~~~~~~~~~~~~~~~~l~ 367 (734)
......+++ +.+++.+.. ..+.|..+|+.++.. . . ...+..+ ...+..+.+..++.++
T Consensus 139 --~~~~~~~s~--~~la~~sg~--~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h--~~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 139 --FGGVCEFSN--GLLVYSNEF--NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH--TNPIKMVRLNRKSDMV 210 (355)
T ss_dssp --EEEEEEEET--TEEEEEESS--CTTCEEEEECCC------------------CCEEECCC--SSCEEEEEECTTSSEE
T ss_pred --CCceEEEEc--cEEEEeCCC--cCcEEEEEECCCCCccccccccccccccCcccEEEEcc--CCceEEEEECCCCCEE
Confidence 112223555 566665222 234688899876420 0 0 2223222 3445566666557777
Q ss_pred EEEEeCCcee-EEEEECCCCceeeeeC-C-CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 368 VHYIQNVRSV-MDLHDLNTGKRLHSFP-L-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 368 ~~~~~~~~~~-l~~~dl~~g~~~~~l~-~-~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++...++ . +.+||+.+|+.+..+. . ..+.+..+.++|+++.++.. +.. ..+.+||+
T Consensus 211 ~s~s~d~--~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~-s~d---~~v~iw~~ 269 (355)
T 3vu4_A 211 ATCSQDG--TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV-SDK---WTLHVFEI 269 (355)
T ss_dssp EEEETTC--SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE-ETT---CEEEEEES
T ss_pred EEEeCCC--CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE-ECC---CEEEEEEc
Confidence 7777764 5 8999999998888886 3 45678889999998765543 332 47889998
No 387
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.64 E-value=3.2e-05 Score=77.06 Aligned_cols=207 Identities=10% Similarity=0.046 Sum_probs=126.1
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
...+++|+|++++|.++-... ..|++++++++......... ....+++++|+++.||++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~------------- 99 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISE----PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ------------- 99 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTT----TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT-------------
T ss_pred cEEEEEEecCCCEEEEEECCC----CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC-------------
Confidence 356899999999887765432 36999999877532211111 233678999998888876531
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI- 300 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~- 300 (734)
..+|++.++++... ..+.... ...-.+++++|++++|++.... .....|+++++++ .. ...+.
T Consensus 100 --~~~I~~~~~~g~~~--~~~~~~~--~~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg-~~--------~~~~~~ 163 (267)
T 1npe_A 100 --LDRIEVAKMDGTQR--RVLFDTG--LVNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDG-TN--------RRILAQ 163 (267)
T ss_dssp --TTEEEEEETTSCSC--EEEECSS--CSSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTS-CC--------CEEEEC
T ss_pred --CCEEEEEEcCCCCE--EEEEECC--CCCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCC-CC--------cEEEEE
Confidence 23788888865432 2222221 1133578999999988876532 1236899999876 21 11222
Q ss_pred ccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
.....-.. .++++++.||+.... ..+|+++++++.. ...++... ... .++.. +++.+|++... ...|+
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~~---~~~I~~~~~~g~~---~~~~~~~~-~~P-~gi~~-d~~~lyva~~~--~~~v~ 232 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDAG---THRAECLNPAQPG---RRKVLEGL-QYP-FAVTS-YGKNLYYTDWK--TNSVI 232 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTEEE---EEEEEECC-CSE-EEEEE-ETTEEEEEETT--TTEEE
T ss_pred CCCCCCcEEEEcCCCCEEEEEECC---CCEEEEEecCCCc---eEEEecCC-CCc-eEEEE-eCCEEEEEECC--CCeEE
Confidence 11111122 388888988886543 3579999997643 23343322 222 34444 45788875433 35799
Q ss_pred EEECCCCceeeeeC
Q psy4818 380 LHDLNTGKRLHSFP 393 (734)
Q Consensus 380 ~~dl~~g~~~~~l~ 393 (734)
++|..+|+.++.+.
T Consensus 233 ~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 233 AMDLAISKEMDTFH 246 (267)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEeCCCCCceEEEc
Confidence 99998898777775
No 388
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.63 E-value=1.3e-05 Score=86.91 Aligned_cols=235 Identities=9% Similarity=0.060 Sum_probs=136.8
Q ss_pred eCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEE
Q psy4818 149 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 227 (734)
Q Consensus 149 ~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l 227 (734)
+++|+++|+-... . ..|++||+.+++.+.... ....+..+.|+||+ .|+....+ ..|
T Consensus 128 ~~~~~~~l~sgs~-d----g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d----------------g~i 185 (464)
T 3v7d_B 128 LQFEDNYVITGAD-D----KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD----------------RTV 185 (464)
T ss_dssp EEEETTEEEEEET-T----SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT----------------SCE
T ss_pred EEECCCEEEEEcC-C----CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC----------------CCE
Confidence 4457787775543 2 369999999998644222 22234678999998 44444322 268
Q ss_pred EEEECCCCCCCCeeEEecCCCCeeEEEEEEe--cCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC-CCC---------
Q psy4818 228 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT--DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG-KFP--------- 295 (734)
Q Consensus 228 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S--pDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~--------- 295 (734)
.+|++.++. .+..+.. +...+..+.|+ +++++|+.... ...|.+||+.++....... ...
T Consensus 186 ~vwd~~~~~--~~~~~~~--h~~~v~~l~~~~~~~~~~l~s~s~----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 186 RVWDIKKGC--CTHVFEG--HNSTVRCLDIVEYKNIKYIVTGSR----DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp EEEETTTTE--EEEEECC--CSSCEEEEEEEESSSCEEEEEEET----TSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred EEEECCCCc--EEEEECC--CCCccEEEEEecCCCCCEEEEEcC----CCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 889987653 2223332 23345566776 67787775432 2578999998732111000 000
Q ss_pred ----ceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEE
Q psy4818 296 ----LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 371 (734)
Q Consensus 296 ----~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 371 (734)
......+.......++++++.++..+.. ..|..+|+.++. ....+... ...+..+.+..++..+++..
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i~vwd~~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD----NTLIVWDVAQMK---CLYILSGH-TDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETT----SCEEEEETTTTE---EEEEECCC-SSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCC----CeEEEEECCCCc---EEEEecCC-CCCEEEEEEcCCCCEEEEEe
Confidence 0111122222233478888877766543 459999997654 22223322 23445555554455666666
Q ss_pred eCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 372 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 372 ~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+ ..|++||+.+|+.+..+......+..+.++ ++ .+++.+.. ..+..+|+
T Consensus 330 ~d--g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~s~d---g~v~vwd~ 379 (464)
T 3v7d_B 330 MD--TTIRIWDLENGELMYTLQGHTALVGLLRLS--DK-FLVSAAAD---GSIRGWDA 379 (464)
T ss_dssp TT--SCEEEEETTTTEEEEEECCCSSCEEEEEEC--SS-EEEEEETT---SEEEEEET
T ss_pred CC--CcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CC-EEEEEeCC---CcEEEEEC
Confidence 55 469999998898888887666667677665 33 44444433 46899999
No 389
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.1e-06 Score=101.41 Aligned_cols=242 Identities=14% Similarity=0.119 Sum_probs=129.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-c-----------ccccccCeeEEEcCCcEEEEEEEecCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-V-----------LKNVKFPSISWTHDHKGFFYNQYCDIN 211 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~-----------~~~~~~~~~~wSpDg~~l~y~~~~~~~ 211 (734)
+..+++||||+.||-... ..+|++||+.+|..... . .....+..++|||||+.|+....+.
T Consensus 438 v~sv~~spdg~~laSgs~-----DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg-- 510 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGHS-----NGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG-- 510 (902)
T ss_dssp CCCCCCCSEEEEEEEEET-----TSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS--
T ss_pred CCcccccccCcEEEEecC-----CCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc--
Confidence 445688999999885443 35899999999863211 0 1112346899999999988876533
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCC---------CC--------------------------------eeEEecCCCCe
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQD---------KD--------------------------------IPVVEFPNGRS 250 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~---------~~--------------------------------~~v~~~~~~~~ 250 (734)
.|.+|++.++.. .+ ..+.....+..
T Consensus 511 --------------tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~ 576 (902)
T 2oaj_A 511 --------------DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG 576 (902)
T ss_dssp --------------CEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC
T ss_pred --------------EEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC
Confidence 466666554310 00 01112222344
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-ccccceEEE-EE-----ecC---CeEEEE
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDHHHEI-IA-----NNG---PELIVK 320 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~-~~~~~~~~~-~s-----~dg---~~l~~~ 320 (734)
.+..++||||| +|+.... ...|.+||++++. .+. ......+. .+....... |+ ||| ++|+..
T Consensus 577 ~V~svafSpdG-~lAsgs~----D~tv~lwd~~~~~--~~~-~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 577 KTSAINNSNIG-FVGIAYA----AGSLMLIDRRGPA--IIY-MENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp SEEEEEECBTS-EEEEEET----TSEEEEEETTTTE--EEE-EEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred cEEEEEecCCc-EEEEEeC----CCcEEEEECCCCe--EEE-EeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence 67789999999 8775432 2679999987721 000 00000010 111223333 89 886 455544
Q ss_pred eCCCCCCceEEEEec---CCCCCCCceE-eecCC----CCceeEEEEEe----------------------eCCEEEEEE
Q psy4818 321 TTKNAPKGKVVTINL---NNPCEKNWKT-LIPED----ENRTLDVVAAV----------------------ANNKLIVHY 370 (734)
Q Consensus 321 s~~~~~~~~l~~~d~---~~~~~~~~~~-l~~~~----~~~~~~~~~~~----------------------~~~~l~~~~ 370 (734)
++. ..|.+|++ .++. +.. +..+. ...++....+. . +..++..
T Consensus 649 s~D----~tv~~wd~~p~~~g~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~-~~~~l~~ 720 (902)
T 2oaj_A 649 TDM----GEVITYKILPASGGK---FDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCI-PGIVLIT 720 (902)
T ss_dssp ETT----SEEEEEEEEECGGGC---EEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCC-CEEEEEE
T ss_pred ecC----CcEEEEEEecCCCCc---EEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCC-CeEEEEE
Confidence 443 45888887 4443 221 11111 11222221111 1 2333333
Q ss_pred EeCCceeEEEEECCCCceeeeeCCCCceEEee---c------cCcccceEEEEEecCCCCceEEEEeC
Q psy4818 371 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI---S------GRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 371 ~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~---~------~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. ...+++|++.+++..+..-...+.+.++ . .++++..|+ ..+. -..+..+++
T Consensus 721 ~---~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~-~~~~---~g~i~~~s~ 781 (902)
T 2oaj_A 721 G---FDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVII-TLEI---NGHLRVFTI 781 (902)
T ss_dssp C---SSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEE-EEET---TSEEEEEET
T ss_pred e---ccceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEE-EEeC---CCcEEEEEC
Confidence 3 3479999998888765553223444443 3 344554443 3332 357899998
No 390
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=6.3e-06 Score=86.41 Aligned_cols=209 Identities=10% Similarity=0.045 Sum_probs=121.9
Q ss_pred EEEeeEEeCCC--CcEEEEEEeCCCCceEEEEEEECCCCC--cccc-cccccccCeeEEEcC--CcEEEEEEEecCCCCC
Q psy4818 142 TALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPE-VLKNVKFPSISWTHD--HKGFFYNQYCDINGTA 214 (734)
Q Consensus 142 ~~~~~~~~SPD--G~~la~~~~~~g~~~~~l~v~dl~~g~--~~~~-~~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~ 214 (734)
..+..++|||+ |++|+.... + ..|++||+.+++ .+.. .........+.|+|+ ++.|+....+.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~----- 125 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSY-D----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG----- 125 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred CcEEEEEeCCCCCCCEEEEecc-C----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----
Confidence 45788999988 888886553 2 359999999886 2221 112223468999999 88887776432
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec-------------CCcEEEEEEecCCCCceEEEEe
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-------------CGRYLLVSTSNNTQGSDLHYFD 281 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-------------DG~~l~~~~~~~~~~~~i~~~d 281 (734)
.|.++++.+........+.. +...+..+.|+| |+++|+....+ ..|++||
T Consensus 126 -----------~i~v~d~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d 188 (379)
T 3jrp_A 126 -----------KVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWK 188 (379)
T ss_dssp -----------EEEEEECCTTSCCCEEEEEC--CTTCEEEEEECCCC----------CTTCEEEEEETT----SCEEEEE
T ss_pred -----------cEEEEecCCCCceeeEEecC--CCCceEEEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEE
Confidence 68889988764433333332 233567899999 68888754432 5789999
Q ss_pred CCCCCCCcccCCCCceeeeccccceEEE-EEec---CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-CCCceeE
Q psy4818 282 LHSLPDGKISGKFPLKTVIPGMDHHHEI-IANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLD 356 (734)
Q Consensus 282 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~ 356 (734)
+.++.. .. .....+.......... |+|+ ++.|+..+. +..|..||+.++.......+... .....+.
T Consensus 189 ~~~~~~-~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 260 (379)
T 3jrp_A 189 YNSDAQ-TY---VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 260 (379)
T ss_dssp EETTTT-EE---EEEEEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESSTTSCCEEEESSSSCCSSCEE
T ss_pred ecCCCc-ce---eeEEEEecccCcEeEEEECCCCCCCCeEEEEeC----CCEEEEEeCCCCCccceeeeeccccCCCcEE
Confidence 876211 00 0001111222223333 9999 555554443 23588888876532111233332 1234455
Q ss_pred EEEEeeCCEEEEEEEeCCceeEEEEECCCCc
Q psy4818 357 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
.+.+..++.++++...++ .|++|++..+.
T Consensus 261 ~~~~s~~g~~l~~~~~dg--~i~iw~~~~~~ 289 (379)
T 3jrp_A 261 RASWSLSGNVLALSGGDN--KVTLWKENLEG 289 (379)
T ss_dssp EEEECSSSCCEEEEESSS--SEEEEEEEETT
T ss_pred EEEEcCCCCEEEEecCCC--cEEEEeCCCCC
Confidence 555655456666665664 57777775443
No 391
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.63 E-value=8e-08 Score=98.50 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=76.1
Q ss_pred CCCcEEEEecCCCCCcCC----ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHH
Q psy4818 486 RRNPVIIYGYGGYGVSVL----PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 561 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 561 (734)
+..|+||++||..+.... ..|.. +.+.|.++||.|+++|+||.|.... .....+++.+.++.+++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~-l~~~L~~~G~~V~~~d~~g~g~s~~----------~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYG-IQEDLQQRGATVYVANLSGFQSDDG----------PNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTT-HHHHHHHTTCCEEECCCCSSCCSSS----------TTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHH-HHHHHHhCCCEEEEEcCCCCCCCCC----------CCCCHHHHHHHHHHHHH
Confidence 456789999998665421 34444 4566777899999999999554211 12335566666666555
Q ss_pred cCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 562 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 562 ~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
. .+.+++.++|||+||.++..++.++|+.++++|+.++.
T Consensus 75 ~--~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 75 A--TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp H--HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred H--hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 4 24568999999999999999999999999999988774
No 392
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.62 E-value=7.6e-08 Score=97.32 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=73.8
Q ss_pred CCCcEEEEecCCCCCcC---CccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHc
Q psy4818 486 RRNPVIIYGYGGYGVSV---LPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 562 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 562 (734)
+..|.||++||..+... ...|.. +...|.++||.|+.+|+||.+. .. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~-~~~~L~~~G~~v~~~d~~g~g~---s~----------~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFG-IPSALRRDGAQVYVTEVSQLDT---SE----------VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTT-HHHHHHHTTCCEEEECCCSSSC---HH----------HHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHH-HHHHHHhCCCEEEEEeCCCCCC---ch----------hhHHHHHHHHHHHHHH
Confidence 45688999999876543 234443 4566777899999999998432 21 1245566655555544
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 563 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 563 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.+.+++.++|||+||.++..++.++|+.++++|+.++.
T Consensus 71 --~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 71 --SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp --HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 24468999999999999999999999999999988774
No 393
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.61 E-value=5.2e-07 Score=90.75 Aligned_cols=104 Identities=11% Similarity=-0.007 Sum_probs=63.7
Q ss_pred cEEEEecCCCCCcCC-ccccHHHHHHHHhc--CeEEEEEecccCCCCCchhhhccccccCCCchhH-HHHHHHHHHHcCC
Q psy4818 489 PVIIYGYGGYGVSVL-PTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD-FQAAAEYMINKKY 564 (734)
Q Consensus 489 P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~--G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~ 564 (734)
+.||++||..+.... ..|.. +...|++. |+.|+++|+ |.|..... ..+. . ..+.+ +...++.+.....
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~-~~~~L~~~~~g~~v~~~d~-G~g~s~~~--~~~~---~-~~~~~~~~~~~~~l~~~~~ 77 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGA-IKKMVEKKIPGIHVLSLEI-GKTLREDV--ENSF---F-LNVNSQVTTVCQILAKDPK 77 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHH-HHHHHHHHSTTCCEEECCC-SSSHHHHH--HHHH---H-SCHHHHHHHHHHHHHSCGG
T ss_pred CcEEEECCCCCCCCCcccHHH-HHHHHHHHCCCcEEEEEEe-CCCCcccc--cccc---c-cCHHHHHHHHHHHHHhhhh
Confidence 347888997655422 23443 44566654 889999997 75422100 0010 0 12333 3344445433211
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhcCCCc-eeEEEEcCC
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQRPEL-YGAALILVG 601 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~-~~a~v~~~~ 601 (734)
. .+++.++|||+||.++..++.++|+. ++..|+..+
T Consensus 78 l-~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 78 L-QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp G-TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred c-cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 1 26899999999999999999999984 888886554
No 394
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.61 E-value=1e-07 Score=96.11 Aligned_cols=118 Identities=8% Similarity=-0.068 Sum_probs=79.8
Q ss_pred EeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhH
Q psy4818 472 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD 551 (734)
Q Consensus 472 i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D 551 (734)
+...++.|.. .+.+..+.||++||..+... ..|...+...|.++||.|+.+|++|.|... .....++
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----------~~~~~~~ 116 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLND-----------TQVNTEY 116 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----------HHHHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----------HHHHHHH
Confidence 4445555643 33345667889999755431 233313456777789999999999854211 0112456
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC---CCceeEEEEcCCcch
Q psy4818 552 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGALD 604 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~~d 604 (734)
+.+.++.+.+. ...+++.|+||||||+++.+++..+ +++++.+|+.+|...
T Consensus 117 la~~I~~l~~~--~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 117 MVNAITTLYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 77777777665 2336899999999999998877764 588999999887654
No 395
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.60 E-value=3.1e-06 Score=91.18 Aligned_cols=208 Identities=10% Similarity=0.060 Sum_probs=119.8
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCC--------CCCCeeEEecCCCCeeEEEEEEecCC
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE--------QDKDIPVVEFPNGRSLGLHSEVTDCG 261 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~--------~~~~~~v~~~~~~~~~~~~~~~SpDG 261 (734)
+..++|+|++..++++...+ ..|+++++.+. .......+.. +......+.|+|++
T Consensus 131 v~~l~~~p~~~~~lat~~~d---------------g~V~vwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPS---------------SDVLVFDYTKHPSKPEPSGECQPDLRLRG--HQKEGYGLSWNPNL 193 (430)
T ss_dssp CSEEEEETTEEEEEEEECSS---------------SCEEEEEGGGSCSSCCTTCCCCCSEEEEC--CSSCCCCEEECTTS
T ss_pred EEEEEECCCCCcEEEEECCC---------------CcEEEEECCCcccccCccccCCCcEEecC--CCCCeEEEEeCCCC
Confidence 46899999866666665421 25888888652 1122222322 22234578999999
Q ss_pred c-EEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 262 R-YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 262 ~-~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
+ +|+ +.. ....|.+|++.++....-. ......+.......... |+|++..+++.... +..|..+|+.+..
T Consensus 194 ~~~l~-s~~---~dg~i~vwd~~~~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 194 NGYLL-SAS---DDHTICLWDINATPKEHRV-IDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNNN 265 (430)
T ss_dssp TTEEE-EEC---TTSCEEEEETTSCCBGGGE-EECSEEECCCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCSC
T ss_pred CCeEE-EEe---CCCeEEEEeCCCCCCCCce-eccceeecCCCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCCC
Confidence 9 555 332 2257999999873211000 00011122222223333 88865555554433 3569999998652
Q ss_pred C-CCceEeecCCCCceeEEEEEee-CCEEEEEEEeCCceeEEEEECCC-CceeeeeCCCCceEEeeccCcccceEEEEEe
Q psy4818 340 E-KNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 340 ~-~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~dl~~-g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~s 416 (734)
. .....+..+. ..+..+.+.. +..++++...+ ..|.+||+.+ ++.+..+....+.+..+.++|+++.++++.+
T Consensus 266 ~~~~~~~~~~~~--~~v~~i~~~p~~~~~l~tg~~d--g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 266 TSKPSHTVDAHT--AEVNCLSFNPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SSSCSEEEECCS--SCEEEEEECSSCTTEEEEEETT--SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcceeEeecCC--CCeEEEEeCCCCCCEEEEEeCC--CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 1 1223332222 3445555544 34577777666 4699999976 3445566555667888999999877777665
Q ss_pred cCCCCceEEEEeC
Q psy4818 417 SFLQPGTIYHCNI 429 (734)
Q Consensus 417 s~~~P~~~~~~d~ 429 (734)
.. ..+.+||+
T Consensus 342 ~d---~~i~iwd~ 351 (430)
T 2xyi_A 342 TD---RRLHVWDL 351 (430)
T ss_dssp TT---SCCEEEEG
T ss_pred CC---CcEEEEeC
Confidence 54 36888888
No 396
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.55 E-value=7.6e-06 Score=88.07 Aligned_cols=209 Identities=10% Similarity=0.062 Sum_probs=118.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECC---CCCcccccc-------------cccccCee--EEEcCCcEEE
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD---TGKDYPEVL-------------KNVKFPSI--SWTHDHKGFF 203 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~---~g~~~~~~~-------------~~~~~~~~--~wSpDg~~l~ 203 (734)
..+..++|+|||++|+..... ..|++||++ +|+.+.... .......+ .|+||++.|+
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKD-----GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCC-----CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 347899999999998865532 369999984 554322111 00111122 2668888777
Q ss_pred EEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC
Q psy4818 204 YNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 283 (734)
Q Consensus 204 y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~ 283 (734)
....+. .|++|++.+.. .+..+..+.+...+..++|+|||++|+.... ...|.+||+.
T Consensus 187 ~~~~d~----------------~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----dg~i~iwd~~ 244 (437)
T 3gre_A 187 ALTNLS----------------RVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTT----RGIIDIWDIR 244 (437)
T ss_dssp EEETTS----------------EEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEET----TSCEEEEETT
T ss_pred EEeCCC----------------eEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcC----CCeEEEEEcC
Confidence 666432 79999997754 2233333213346778999999999885432 2579999998
Q ss_pred CCCCCcccCCCCceeee-ccccceEEE-EE----ecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-------
Q psy4818 284 SLPDGKISGKFPLKTVI-PGMDHHHEI-IA----NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED------- 350 (734)
Q Consensus 284 ~~~~~~l~~~~~~~~l~-~~~~~~~~~-~s----~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~------- 350 (734)
++. ....+. .+....... |+ +++..|+ .+.. +..|.+||+.++.. ...+..+.
T Consensus 245 ~~~--------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~-s~~~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~ 310 (437)
T 3gre_A 245 FNV--------LIRSWSFGDHAPITHVEVCQFYGKNSVIVV-GGSS---KTFLTIWNFVKGHC--QYAFINSDEQPSMEH 310 (437)
T ss_dssp TTE--------EEEEEBCTTCEEEEEEEECTTTCTTEEEEE-EEST---TEEEEEEETTTTEE--EEEEESSSSCCCGGG
T ss_pred Ccc--------EEEEEecCCCCceEEEEeccccCCCccEEE-EEcC---CCcEEEEEcCCCcE--EEEEEcCCCCCccce
Confidence 721 112221 222122222 33 3444333 3332 35699999876541 12222111
Q ss_pred -----------------CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCC
Q psy4818 351 -----------------ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 394 (734)
Q Consensus 351 -----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~ 394 (734)
....+..+.+.+ +.++++...+ ..|++||+.+++....+..
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d--~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 311 FLPIEKGLEELNFCGIRSLNALSTISVSN-DKILLTDEAT--SSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GSCBCSSGGGCCCCCCCSGGGGCCEEEET-TEEEEEEGGG--TEEEEEETTCGGGCEEEEC
T ss_pred ecccccccccceecccccCCceEEEEECC-ceEEEecCCC--CeEEEEECCCcccceEEec
Confidence 111233344454 6777777666 4899999988886666654
No 397
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.55 E-value=1e-07 Score=101.89 Aligned_cols=113 Identities=12% Similarity=0.050 Sum_probs=76.3
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHH-HHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRC-MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|+||++||..+.. ...|...+. .++++.+|.|+++|+||+|... +..+. ..-....+++.+.+++|.++.
T Consensus 66 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTA--YSQAS--QNVRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCc--cHHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 45679999999965443 223444333 4455569999999999965432 11110 000111245666677776443
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.++.+++.|+|||+||.+++.++.++|++++.++...|.
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 356789999999999999999999999999999877664
No 398
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.55 E-value=2.5e-07 Score=98.54 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=76.3
Q ss_pred eEEEEEeccccCCCCCcEEEEecCCCCCcCCc-cccHHHHHHHHhcCeEEEEEecccCCCCCchhhhcc---ccccC---
Q psy4818 473 PMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG---RLLKK--- 545 (734)
Q Consensus 473 ~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~---~~~~~--- 545 (734)
.-..+....+-.+...|+| +.|||.+..... .....+..+..+.|+.|+++|.||.|.... +.... ....+
T Consensus 24 ~qRy~~~~~~~~~~g~Pi~-l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p-~~~~~~~~~~~l~~lt 101 (446)
T 3n2z_B 24 NQRYLVADKYWKKNGGSIL-FYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLP-FGDNSFKDSRHLNFLT 101 (446)
T ss_dssp EEEEEEECTTCCTTTCEEE-EEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCT-TGGGGGSCTTTSTTCS
T ss_pred EEEEEEehhhcCCCCCCEE-EEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCC-CCccccccchhhccCC
Confidence 3334443333222345754 558987754321 111223345555689999999999554321 11100 01111
Q ss_pred -CCchhHHHHHHHHHHHcC-CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 546 -QNCFDDFQAAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 546 -~~~~~D~~~~~~~l~~~~-~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
...++|+...+++|..+. .....++.++||||||.++++++.++|+++.++|+.++
T Consensus 102 ~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 102 SEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 224567777777776541 12335799999999999999999999999998887553
No 399
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.54 E-value=3.9e-05 Score=80.53 Aligned_cols=210 Identities=8% Similarity=0.024 Sum_probs=114.7
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
.++.|||||++|+++.... ...|.++| ++++.+.. .... ..+...|+++..++....+
T Consensus 128 ~~~~~spDG~~l~v~n~~~---~~~v~viD-~t~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~d-------------- 186 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAA---GPAVGLVV-QGGSSDDQLLSSP---TCYHIHPGAPSTFYLLCAQ-------------- 186 (373)
T ss_pred cceEECCCCCEEEEEecCC---CCeEEEEE-CCCCEEeEEcCCC---ceEEEEeCCCceEEEEcCC--------------
Confidence 4689999999998775322 14799999 99986543 2211 2245567887766554321
Q ss_pred CcEEEEEECCCCCCCCe----eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 224 GQKIYYHVLGTEQDKDI----PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~----~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
.++..++. ++..... .++ ....+ .+..+.+++++..+++.... ..++++|+.++. ..+. ..+...
T Consensus 187 -g~~~~vd~-~g~~~~~~~~~~~~-~~~~p-~~~~~~~~~~~~~~~~~~~~----~~v~vid~~~~~-~~v~--~~~~~~ 255 (373)
T 2mad_H 187 -GGLAKTDH-AGGAAGAGLVGAML-TAAQN-LLTQPAQANKSGRIVWPVYS----GKILQADISAAG-ATNK--APIDAL 255 (373)
T ss_pred -CCEEEEEC-CCcEEEEEeccccc-cCCcc-eeecceeEecCCEEEEEcCC----ceEEEEeccCCc-ceEe--eeeeec
Confidence 13455555 3321100 011 11112 33456788888877766422 489999997621 1110 011100
Q ss_pred e-----cccc-ceE--EEEEecCCeEEEEeCCCC------CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCC
Q psy4818 300 I-----PGMD-HHH--EIIANNGPELIVKTTKNA------PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANN 364 (734)
Q Consensus 300 ~-----~~~~-~~~--~~~s~dg~~l~~~s~~~~------~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~ 364 (734)
. .... .+. ..+++|++++|+..+... ....|+++|+++.+ ...-++-. ... ..+.+. +++
T Consensus 256 ~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i~~g-~~p-~~i~~s~Dg~ 330 (373)
T 2mad_H 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQISLG-HDV-DAISVAQDGG 330 (373)
T ss_pred CCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEEECC-CCc-CeEEECCCCC
Confidence 0 0001 111 137899999998765321 23579999998765 22223322 122 233344 434
Q ss_pred EEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 365 KLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
.+++.... +...|.++|+++++.++.+
T Consensus 331 ~~l~v~~~-~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 331 PDLYALSA-GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEEcC-CCCeEEEEECCCCCEEeee
Confidence 35555542 2368999999999887663
No 400
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.52 E-value=1.1e-05 Score=83.97 Aligned_cols=240 Identities=10% Similarity=0.005 Sum_probs=127.8
Q ss_pred eEEeCCCCcEEEEEEeC-----CCCceEEEEEEECCCCCccccc-cc-------ccccCeeEEEcCCcEEEEEEEecCCC
Q psy4818 146 LYAFSDNGKHFAYCLSK-----SGSDWNTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDING 212 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~-----~g~~~~~l~v~dl~~g~~~~~~-~~-------~~~~~~~~wSpDg~~l~y~~~~~~~~ 212 (734)
++.+||||++|..+... .|.....|.++|+.+++.+... .+ ......+++||||+++|.....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~--- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS--- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS---
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC---
Confidence 69999999998877531 2334578999999999865432 12 12246899999999888765321
Q ss_pred CCCCCcccccCCcEEEE--EECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC-----C
Q psy4818 213 TADGTETTAHMGQKIYY--HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-----L 285 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~--~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~-----~ 285 (734)
...|.+ +++.+ +.....+.. ....|+|+..++... ....+.++++++ +
T Consensus 146 -----------~~~v~V~~iD~~t-----v~~i~v~~~------~~~~p~g~~~~~~~~---~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 146 -----------SAAAGLSVPGASD-----DQLTKSASC------FHIHPGAAATHYLGS---CPASLAASDLAAAPAAAG 200 (368)
T ss_dssp -----------SCEEEEEETTTEE-----EEEEECSSC------CCCEEEETTEEECCC---CTTSCEEEECCSSCCCCE
T ss_pred -----------CCeEEEEEEchhh-----ceEEECCCc------eEEccCCCeEEEEEc---CCCCEEEEECccccccCC
Confidence 113444 33332 111111110 123455554443211 112334455543 1
Q ss_pred CCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC------CCcee---E
Q psy4818 286 PDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED------ENRTL---D 356 (734)
Q Consensus 286 ~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~------~~~~~---~ 356 (734)
... .+. ... +..+.... .+++++.+++.+. ..++.+|+.+.... ....+.-. ..... +
T Consensus 201 ~v~-~~~-t~~--i~vg~~P~---~~~~~~~~~~vs~-----~~V~viD~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 201 IVG-AQC-TGA--QNCSSQAA---QANYPGMLVWAVA-----SSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp ECC-CCS-CTT--SCBCSCCE---EETTTTEEEECBS-----SCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSS
T ss_pred eEE-EEe-eee--eeCCCCcc---ccccCCEEEEEcC-----CEEEEEECCCCcce-EEEEEEeccccccccccccCcce
Confidence 000 000 000 00111222 2788888888776 35888998653210 00000000 00000 0
Q ss_pred -EEEEeeCCEEEEEEEeC-C-----ceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 357 -VVAAVANNKLIVHYIQN-V-----RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 357 -~~~~~~~~~l~~~~~~~-~-----~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
-....+++++|+..... + ...+.++|+++++.++.|..+. ...++.+++|++.++++.... -..+..+|+
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~--~~~VsVID~ 344 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAG--TEVLDIYDA 344 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETT--TTEEEEEES
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCC--CCeEEEEEC
Confidence 11233456777765523 3 2446699999998888776543 345778889998888876511 247999999
No 401
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.51 E-value=5.8e-07 Score=88.64 Aligned_cols=195 Identities=9% Similarity=-0.019 Sum_probs=103.5
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|.||++||..+... .|.. +...|. .++.|+.+|++|.+ ...+++.+.++.+.
T Consensus 20 ~~~~~l~~~hg~~~~~~--~~~~-~~~~l~-~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~----- 74 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGI--YFKD-LALQLN-HKAAVYGFHFIEED----------------SRIEQYVSRITEIQ----- 74 (244)
T ss_dssp CCSSEEEEECCTTCCGG--GGHH-HHHHTT-TTSEEEEECCCCST----------------THHHHHHHHHHHHC-----
T ss_pred CCCCCEEEECCCCCCHH--HHHH-HHHHhC-CCceEEEEcCCCHH----------------HHHHHHHHHHHHhC-----
Confidence 34578899999765543 3433 445565 48999999999831 12345555555441
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcC---CCceeEEEEcCCcchhccccccccCcccccccCCCCCHHHH----HHHHhCCc
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHF----HNLLSYSP 638 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~sp 638 (734)
...++.++|+|+||.++..++.+. ++.++.+|+..+.............. ...++-.+...+.+ ..+..+..
T Consensus 75 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T 2cb9_A 75 PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTEND-DSAAYLPEAVRETVMQKKRCYQEYWA 153 (244)
T ss_dssp SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC--------CCSCHHHHHHHTHHHHHHHHHHH
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHH-HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 124699999999999999988764 56677777766543210000000000 00001011000111 11111111
Q ss_pred -cCCCCCCCCCccCCcEEEEecC--CCCCCCChHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCC--CCCCchHHhHHH
Q psy4818 639 -LHNIKVPPNNTQYPATLVLTGD--HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGH--GQGTPLMKSIEE 713 (734)
Q Consensus 639 -~~~~~~p~~~~~~P~~Li~~g~--~D~~v~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH--~~~~~~~~~~~~ 713 (734)
...... +++| +++++|+ .|. +++.. ...+.+.. ...+++..+++ || .+..+. ..+.
T Consensus 154 ~~~~~~~----i~~P-vl~i~g~~~~D~-~~~~~----~~~w~~~~------~~~~~~~~i~g-gH~~~~~~~~--~~~~ 214 (244)
T 2cb9_A 154 QLINEGR----IKSN-IHFIEAGIQTET-SGAMV----LQKWQDAA------EEGYAEYTGYG-AHKDMLEGEF--AEKN 214 (244)
T ss_dssp HCCCCSC----BSSE-EEEEECSBCSCC-CHHHH----TTSSGGGB------SSCEEEEECSS-BGGGTTSHHH--HHHH
T ss_pred hhccCCC----cCCC-EEEEEccCcccc-ccccc----hhHHHHhc------CCCCEEEEecC-ChHHHcChHH--HHHH
Confidence 112222 6777 9999999 786 33222 12222220 23578889996 99 554322 2345
Q ss_pred HHHHHHHHHHHc
Q psy4818 714 MTDIYVFLMKSL 725 (734)
Q Consensus 714 ~~~~~~fl~~~l 725 (734)
...+.+||.+..
T Consensus 215 ~~~i~~~L~~~~ 226 (244)
T 2cb9_A 215 ANIILNILDKIN 226 (244)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHhcCc
Confidence 556777877543
No 402
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.50 E-value=7.2e-05 Score=80.65 Aligned_cols=232 Identities=11% Similarity=0.108 Sum_probs=132.9
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
+..+.| ++++|+.... ...|++||+.+++.+..... ......+.| ||+.|+....+.
T Consensus 202 v~~~~~--~~~~l~s~s~-----dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg------------- 259 (445)
T 2ovr_B 202 VRCMHL--HEKRVVSGSR-----DATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF------------- 259 (445)
T ss_dssp EEEEEE--ETTEEEEEET-----TSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS-------------
T ss_pred EEEEEe--cCCEEEEEeC-----CCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC-------------
Confidence 344444 4555554432 24688999888875432221 112234555 777776655322
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
.|.++++.++. .+.....+...+..+.| ||++|+.... ...|.+||+.++. ....+ ..
T Consensus 260 ---~i~iwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~i~d~~~~~--------~~~~~-~~ 317 (445)
T 2ovr_B 260 ---MVKVWDPETET----CLHTLQGHTNRVYSLQF--DGIHVVSGSL----DTSIRVWDVETGN--------CIHTL-TG 317 (445)
T ss_dssp ---CEEEEEGGGTE----EEEEECCCSSCEEEEEE--CSSEEEEEET----TSCEEEEETTTCC--------EEEEE-CC
T ss_pred ---EEEEEECCCCc----EeEEecCCCCceEEEEE--CCCEEEEEeC----CCeEEEEECCCCC--------EEEEE-cC
Confidence 57888876643 22222222334455566 8998875432 2579999998731 11222 22
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
.......++++++.++..+. ++.|..+|+.++.. ...+.... ....+..+.+ + +.++++...+ ..|.+|
T Consensus 318 ~~~~v~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~-~-~~~l~s~~~d--g~v~iw 387 (445)
T 2ovr_B 318 HQSLTSGMELKDNILVSGNA----DSTVKIWDIKTGQC--LQTLQGPNKHQSAVTCLQF-N-KNFVITSSDD--GTVKLW 387 (445)
T ss_dssp CCSCEEEEEEETTEEEEEET----TSCEEEEETTTCCE--EEEECSTTSCSSCEEEEEE-C-SSEEEEEETT--SEEEEE
T ss_pred CcccEEEEEEeCCEEEEEeC----CCeEEEEECCCCcE--EEEEccCCCCCCCEEEEEE-C-CCEEEEEeCC--CeEEEE
Confidence 22233346677776665443 34699999976541 22332211 2334455544 3 3455555555 479999
Q ss_pred ECCCCceeeeeC-----CCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSFP-----LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l~-----~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+|+.++.+. ...+.+..+.+++++..++....+-+.+..++++|.
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred ECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 999998777662 225677888888887655555444444677999998
No 403
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.50 E-value=1.5e-07 Score=100.61 Aligned_cols=112 Identities=11% Similarity=0.093 Sum_probs=74.1
Q ss_pred CCCCcEEEEecCCCCCcCCccccHHHHH-HHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcC
Q psy4818 485 NRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 563 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 563 (734)
+...|+||++||..+.. ...|...+.. ++.+.||.|+++|+||++... +..+. ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~ 141 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANY 141 (450)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 35679999999975443 2234443333 444448999999999965322 11111 001112345666677775432
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCCc
Q psy4818 564 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 602 (734)
Q Consensus 564 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 602 (734)
.++.+++.|+|||+||.+++.++.++|+ ++.++...|.
T Consensus 142 g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 142 SYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred CCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 3467899999999999999999999999 8888876654
No 404
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.50 E-value=1.9e-05 Score=81.99 Aligned_cols=239 Identities=10% Similarity=0.043 Sum_probs=125.1
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcE
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 226 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 226 (734)
..+++|++.|+-... ...|++||+.+|+.+..... .....+.|+|+ ++-...+. ...-......
T Consensus 42 ~~~~~d~~~l~sg~~-----Dg~v~iwd~~~~~~~~~~~~-~~v~~~~~~~~---~~s~s~D~-------~i~~w~~~~~ 105 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCE-----DGALHFTQLKDSKTITTITT-PNPRTGGEHPA---IISRGPCN-------RLLLLYPGNQ 105 (343)
T ss_dssp SSSSEEEEEEEEEEE-----TTEEEEEEESSSSCEEEEEE-ECCCTTCCCCS---EEEECSTT-------EEEEEETTTE
T ss_pred hhhcCCCCEEEEECC-----CCcEEEEECCCCcEEEEEec-CCceeeeeCCc---eEEecCCC-------eEEEEEccCc
Confidence 456788888876543 24799999999885432111 12245566666 22222111 0000000112
Q ss_pred EEEEECCCCCCCCeeEEecCCCCeeEEEEEEec--CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-ccc
Q psy4818 227 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD--CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGM 303 (734)
Q Consensus 227 l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~-~~~ 303 (734)
+..+++.+.. .+..+.. .+...+..+.|+| +|++++... ....|.+||+.++. . .... ...
T Consensus 106 ~~~~~~~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s----~dg~i~~wd~~~~~--------~-~~~~~~~~ 169 (343)
T 3lrv_A 106 ITILDSKTNK--VLREIEV-DSANEIIYMYGHNEVNTEYFIWAD----NRGTIGFQSYEDDS--------Q-YIVHSAKS 169 (343)
T ss_dssp EEEEETTTCC--EEEEEEC-CCSSCEEEEECCC---CCEEEEEE----TTCCEEEEESSSSC--------E-EEEECCCS
T ss_pred eEEeecCCcc--eeEEeec-CCCCCEEEEEcCCCCCCCEEEEEe----CCCcEEEEECCCCc--------E-EEEEecCC
Confidence 3334443332 1112221 1223467899999 999987443 22579999998732 1 1111 111
Q ss_pred c-ceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 304 D-HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 304 ~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
. .... .|+|||..|+..+. +..|..+|+.++.. ....+.......+..+.+..++..+++.. ++ .|.+|
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~----dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~--~v~iw 240 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSP----DGILDVYNLSSPDQ--ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ--TVVCF 240 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECT----TSCEEEEESSCTTS--CCEECCCCTTSCEEEEEECTTSSEEEEEE-SS--BEEEE
T ss_pred CCceEEEEECCCCCEEEEEcC----CCEEEEEECCCCCC--CccEEeccCCCCEEEEEEeCCCCEEEEEe-CC--eEEEE
Confidence 1 1222 38999886664332 34699999987652 21223331234556666665566666665 33 79999
Q ss_pred ECCCCceeeeeCC---CCceE--EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 382 DLNTGKRLHSFPL---DLGQI--THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 382 dl~~g~~~~~l~~---~~g~v--~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+++....+.. +...+ ..+++++++..++....+. ..+.+|++
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d---~~i~v~~~ 290 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES---NSLTIYKF 290 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT---TEEEEEEE
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC---CcEEEEEE
Confidence 9987765444432 11222 2477888887665433212 25666666
No 405
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.49 E-value=1.3e-05 Score=82.86 Aligned_cols=232 Identities=11% Similarity=0.061 Sum_probs=128.7
Q ss_pred CCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEE
Q psy4818 152 NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 231 (734)
Q Consensus 152 DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (734)
++++|..+...+ ..|.++|+++++.+...........+++++|| .||.+... ...|++++
T Consensus 52 ~~~~lyv~~~~~----~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~---------------~~~v~~iD 111 (328)
T 3dsm_A 52 RDGIGWIVVNNS----HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW---------------DYRIFIIN 111 (328)
T ss_dssp ETTEEEEEEGGG----TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS---------------CSEEEEEE
T ss_pred ECCEEEEEEcCC----CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC---------------CCeEEEEE
Confidence 566666655433 36999999999865422222234678999998 56544311 23788888
Q ss_pred CCCCCCCCeeEEecCC------CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 232 LGTEQDKDIPVVEFPN------GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 232 l~t~~~~~~~v~~~~~------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
+.+.... ....... .+ .++++ +++.|++... .....|+++|++++. ....+..+...
T Consensus 112 ~~t~~~~--~~i~~g~~~~~~~~p---~~i~~--~~~~lyv~~~--~~~~~v~viD~~t~~--------~~~~i~~g~~p 174 (328)
T 3dsm_A 112 PKTYEIT--GYIECPDMDMESGST---EQMVQ--YGKYVYVNCW--SYQNRILKIDTETDK--------VVDELTIGIQP 174 (328)
T ss_dssp TTTTEEE--EEEECTTCCTTTCBC---CCEEE--ETTEEEEEEC--TTCCEEEEEETTTTE--------EEEEEECSSCB
T ss_pred CCCCeEE--EEEEcCCccccCCCc---ceEEE--ECCEEEEEcC--CCCCEEEEEECCCCe--------EEEEEEcCCCc
Confidence 7765321 1122211 22 23455 5677766532 113689999998731 11111111111
Q ss_pred eEEEEEecCCeEEEEeCCCCC-------CceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCcee
Q psy4818 306 HHEIIANNGPELIVKTTKNAP-------KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSV 377 (734)
Q Consensus 306 ~~~~~s~dg~~l~~~s~~~~~-------~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 377 (734)
..-.+++||+ +|+.++.... ...|+++|.++.+ +...+.-........+.+. +++.+|+.. . .
T Consensus 175 ~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~----~ 245 (328)
T 3dsm_A 175 TSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFKLGDWPSEVQLNGTRDTLYWIN-N----D 245 (328)
T ss_dssp CCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECCTTCCCEEEEECTTSCEEEEES-S----S
T ss_pred cceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecCCCCCceeEEEecCCCEEEEEc-c----E
Confidence 1123678876 6766653211 2579999998764 3322221111223445454 345666542 2 7
Q ss_pred EEEEECCCCceeee--eCCCCceEEeeccCcccceEEEEE-ecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHS--FPLDLGQITHISGRRKYNEVFYGF-TSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~--l~~~~g~v~~~~~~~d~~~l~~~~-ss~~~P~~~~~~d~ 429 (734)
++++|+++++.... ++.......++.++|+++.++++. .++.....++++|.
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 99999987775321 221123455777888777888774 23344678999998
No 406
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.48 E-value=1.2e-05 Score=81.99 Aligned_cols=247 Identities=12% Similarity=0.092 Sum_probs=133.9
Q ss_pred EeeEEeCCCCcEEEEEEe---CCCCceEEEEEEECCCCCcccccc-----cccccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLS---KSGSDWNTLHIKDVDTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~---~~g~~~~~l~v~dl~~g~~~~~~~-----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
..+++|+|||+. .++.. ..+.....|+++|+.+|+...... ......++.+++|+..|+++...
T Consensus 20 ~~~~~~~~~g~l-~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------- 91 (314)
T 1pjx_A 20 AEGPVFDKNGDF-YIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------- 91 (314)
T ss_dssp CEEEEECTTSCE-EEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------
T ss_pred ccCceECCCCCE-EEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------
Confidence 457899999974 44310 001112469999998887543222 11123578899993356655421
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeE-EecCCC--CeeEEEEEEecCCcEEEEEEecCC------------CCceEEEE
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPV-VEFPNG--RSLGLHSEVTDCGRYLLVSTSNNT------------QGSDLHYF 280 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v-~~~~~~--~~~~~~~~~SpDG~~l~~~~~~~~------------~~~~i~~~ 280 (734)
..|++++.. +.. ..+ ...... .....++.+++||+.. +...... ....|+.+
T Consensus 92 ---------~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 92 ---------LGLLVVQTD-GTF--EEIAKKDSEGRRMQGCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp ---------TEEEEEETT-SCE--EECCSBCTTSCBCBCCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred ---------CCEEEEeCC-CCE--EEEEeccCCCccccCCcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEE
Confidence 158888776 321 111 111100 1123468899999754 3332210 01578888
Q ss_pred eCCCCCCCcccCCCCceeeeccccceEE-EEE----ecCCeEEEEeCCCCCCceEEEEecC-CCCCCCceEe--ecCCCC
Q psy4818 281 DLHSLPDGKISGKFPLKTVIPGMDHHHE-IIA----NNGPELIVKTTKNAPKGKVVTINLN-NPCEKNWKTL--IPEDEN 352 (734)
Q Consensus 281 d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s----~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l--~~~~~~ 352 (734)
+.+. . ...+......... .++ +||+.+|+.... ..+|++++++ ++.......+ ++....
T Consensus 159 ~~~g-~---------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 159 TTDG-Q---------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp CTTS-C---------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred CCCC-C---------EEEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECCCCCccccceEEEECCCCCC
Confidence 8653 1 1222222122222 388 888877776443 3468888875 2220000111 111100
Q ss_pred ceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 353 RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.....+.+..++.+++....+ ..|+++|..+|+.+..+..+...+.++.++++++.+++.... ...++++++
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeC
Confidence 234455555556777665433 479999996687656665554456677778888777776543 257999998
No 407
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.48 E-value=2.3e-05 Score=82.02 Aligned_cols=225 Identities=11% Similarity=0.058 Sum_probs=111.4
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc-cc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
..+++||||++|+.+.... ...|.++|+++++.+.. .. ... .+....|+++..++....+
T Consensus 111 ~~i~~spdg~~l~v~n~~~---~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~~~~d------------- 172 (361)
T 2oiz_A 111 GLFRQTTDGKFIVLQNASP---ATSIGIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMTICGD------------- 172 (361)
T ss_dssp GGEEECTTSSEEEEEEESS---SEEEEEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEEEETT-------------
T ss_pred ceEEECCCCCEEEEECCCC---CCeEEEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEEECCC-------------
Confidence 4689999999887654321 25799999999976532 11 111 1122334443222222111
Q ss_pred CCcEEEEEECCCCCCCC-----eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 223 MGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~-----~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
.++..+.+....... ..++.....+ .....+|||+.+++... ...++++|+.+.. ..+.. .+.
T Consensus 173 --g~~~~v~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~----~~~v~v~d~~~~~-~~~~~--~~~ 240 (361)
T 2oiz_A 173 --GGLLTINLGEDGKVASQSRSKQMFSVKDDP---IFIAPALDKDKAHFVSY----YGNVYSADFSGDE-VKVDG--PWS 240 (361)
T ss_dssp --SSEEEEEECTTSSEEEEEECCCCSCTTTSC---BCSCCEECSSEEEEEBT----TSEEEEEECSSSS-CEEEE--EEE
T ss_pred --CcEEEEEECCCCcEeeeccccceEcCCCCc---eEEEecccCCEEEEEeC----CCeEEEEEecCCC-ceecc--ccc
Confidence 012222221100000 0011111111 12345788988877542 2479999987621 11100 000
Q ss_pred eee-----cccc-ce--EEEEEecCCeEEEEeCCCC-------CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee
Q psy4818 298 TVI-----PGMD-HH--HEIIANNGPELIVKTTKNA-------PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA 362 (734)
Q Consensus 298 ~l~-----~~~~-~~--~~~~s~dg~~l~~~s~~~~-------~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 362 (734)
... .+.. .+ ...+++|++++|+....++ ....|+++|+++.+ ...-++.. . ...+.+..
T Consensus 241 ~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~-~--p~~ia~sp 314 (361)
T 2oiz_A 241 LLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGR-D--ALSMTIDQ 314 (361)
T ss_dssp SCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECT-T--CCEEEEET
T ss_pred ccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecC-C--eeEEEECC
Confidence 000 0000 11 1248999999887653111 23479999998765 23333333 2 33444443
Q ss_pred CCEEEEEEEeCCceeEEEEECCCC--ceeeeeC-CCCceEEeeccCcccc
Q psy4818 363 NNKLIVHYIQNVRSVMDLHDLNTG--KRLHSFP-LDLGQITHISGRRKYN 409 (734)
Q Consensus 363 ~~~l~~~~~~~~~~~l~~~dl~~g--~~~~~l~-~~~g~v~~~~~~~d~~ 409 (734)
+++.++.... ..|.+||++++ +.+..+. ...+ ...+.++|+++
T Consensus 315 dg~~l~v~n~---~~v~v~D~~t~~l~~~~~i~~~G~~-P~~~~~~p~G~ 360 (361)
T 2oiz_A 315 QRNLMLTLDG---GNVNVYDISQPEPKLLRTIEGAAEA-SLQVQFHPVGG 360 (361)
T ss_dssp TTTEEEEECS---SCEEEEECSSSSCEEEEEETTSCSS-EEEEEECCCSC
T ss_pred CCCEEEEeCC---CeEEEEECCCCcceeeEEeccCCCC-cEEEEecCCCC
Confidence 3444444432 67999999999 8777763 2222 23566677764
No 408
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.44 E-value=3.8e-05 Score=79.01 Aligned_cols=162 Identities=10% Similarity=-0.012 Sum_probs=91.0
Q ss_pred EEEeeEEeCC--CCcEEEEEEeCCCCceEEEEEEECCCCCc---------cc-ccccccccCeeEEEcC--CcEEEEEEE
Q psy4818 142 TALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKD---------YP-EVLKNVKFPSISWTHD--HKGFFYNQY 207 (734)
Q Consensus 142 ~~~~~~~~SP--DG~~la~~~~~~g~~~~~l~v~dl~~g~~---------~~-~~~~~~~~~~~~wSpD--g~~l~y~~~ 207 (734)
..+..++|+| ||++|+.... + ..|++||+.+++. +. ..........+.|+|+ ++.|+....
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~-d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASY-D----KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-T----SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CcEEEEEEcCCCCCCEEEEEcC-C----CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 4588999999 6998886653 2 3699999988742 11 1112223467899999 888877664
Q ss_pred ecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec---------CCCCeeEEEEEEecC---CcEEEEEEecCCCCc
Q psy4818 208 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF---------PNGRSLGLHSEVTDC---GRYLLVSTSNNTQGS 275 (734)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~---------~~~~~~~~~~~~SpD---G~~l~~~~~~~~~~~ 275 (734)
+. .|++|++.+........... .........+.|+|+ ++.++..... .
T Consensus 133 dg----------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~ 192 (351)
T 3f3f_A 133 DG----------------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE----Q 192 (351)
T ss_dssp TC----------------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT----E
T ss_pred CC----------------cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC----C
Confidence 32 68888887665322211100 012224467899998 8887765432 3
Q ss_pred eEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecCC---eEEEEeCCCCCCceEEEEecCC
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNGP---ELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg~---~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
.+.+++...+.. .....+.......... |+|++. .+++.+.. +..|..||+.+
T Consensus 193 ~~~~~~~~~~~~------~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~---dg~i~iwd~~~ 249 (351)
T 3f3f_A 193 AIIYQRGKDGKL------HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK---DGRIRIFKITE 249 (351)
T ss_dssp EEEEEECTTSCE------EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET---TSCEEEEEEEE
T ss_pred cEEEEccCCCce------eeeeecCCCCcceeEEEECCCCCCcceEEEEEcC---CCeEEEEeCCC
Confidence 444455444110 0011111222223333 899983 34444433 23477777764
No 409
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.43 E-value=6e-06 Score=87.72 Aligned_cols=243 Identities=9% Similarity=-0.015 Sum_probs=127.4
Q ss_pred eEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccc----cc--cccccCeeEEEc--------CCcEEEEEEEecCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----VL--KNVKFPSISWTH--------DHKGFFYNQYCDIN 211 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~----~~--~~~~~~~~~wSp--------Dg~~l~y~~~~~~~ 211 (734)
...++|+++.||-... ..+|++||+++++.... +. ....+..++|+| ||+.|+-...|.
T Consensus 94 ~~~~~~~~~~las~~~-----d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-- 166 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQ-----DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-- 166 (393)
T ss_dssp ---CCEEEEEEEEEET-----TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS--
T ss_pred eeecCCCCCEEEEEeC-----CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC--
Confidence 3456777777775543 24699999988864221 11 112346899998 888787766543
Q ss_pred CCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc
Q psy4818 212 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 291 (734)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~ 291 (734)
.|.+|++.+... ...++.. ......++|+|++..++++... ...|.+||+.++....-.
T Consensus 167 --------------tv~~Wd~~~~~~-~~~~~~~---~~~v~~v~~~p~~~~~l~~~~~---d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 167 --------------TLIIWRLTDEGP-ILAGYPL---SSPGISVQFRPSNPNQLIVGER---NGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp --------------EEEEEEEETTEE-EEEEEEC---SSCEEEEEEETTEEEEEEEEET---TSEEEEEETTCCC-----
T ss_pred --------------eEEEEECCCCce-eeeecCC---CCCcEEEEECCCCCceEEecCC---CCEEEEEECCCCcccccc
Confidence 688888865432 1122222 2245689999999866655543 257999999874221100
Q ss_pred C-----CCCcee------------eeccccceEEE-EE-ecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC--
Q psy4818 292 G-----KFPLKT------------VIPGMDHHHEI-IA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-- 350 (734)
Q Consensus 292 ~-----~~~~~~------------l~~~~~~~~~~-~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-- 350 (734)
. ...+.. ........... |+ +||+.|+-.+. +..+..+|+.++.. ...+....
T Consensus 226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~----d~~i~vwd~~~~~~--~~~l~~~~~~ 299 (393)
T 4gq1_A 226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK----SGAWLRWNLFANND--YNEISDSTMK 299 (393)
T ss_dssp -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT----TSEEEEEEC-----------------
T ss_pred cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC----CCCEEEEECccCCC--CceEeeecCc
Confidence 0 000000 00001111122 44 78887765433 34577888765321 01111000
Q ss_pred ---------------CCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCceEEeeccCcccceEEEE
Q psy4818 351 ---------------ENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 351 ---------------~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~ 414 (734)
....+...... .++.+++....+ ..|++||+.+|+....+......|.+++++||++.|++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D--g~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH--GLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT--TEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCC--CEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 00111111222 224455544444 479999998887655444445568899999999888765
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
..+ .+.++.+
T Consensus 378 s~~-----Gv~lvrL 387 (393)
T 4gq1_A 378 TEG-----SVLLTRL 387 (393)
T ss_dssp ESS-----EEEEEEE
T ss_pred eCC-----CeEEEEE
Confidence 322 4555555
No 410
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.42 E-value=2.5e-05 Score=79.30 Aligned_cols=216 Identities=13% Similarity=0.108 Sum_probs=113.8
Q ss_pred EEeeEEeCCC----CcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 143 ALKLYAFSDN----GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 143 ~~~~~~~SPD----G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
.+..+++||| +++++-.. .++.++++.+|+.+.... ....+...++||||+.+.-...
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g-------~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~--------- 176 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSG-------NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL--------- 176 (356)
T ss_dssp EEEEECC------CCEEEEEEE-------EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE---------
T ss_pred ceEEEEECCCccccccEEEeCC-------CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeecc---------
Confidence 4667888888 88777522 346677777666443211 1222345566677764432111
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEec---CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD---CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 293 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp---DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 293 (734)
| +. . ...++||| ||..|+ +. .....|.+||+++|.
T Consensus 177 -------------~---~~-----------~----v~~l~fs~~~g~~~~La-Sg---S~D~TIkIWDl~TGk------- 214 (356)
T 2w18_A 177 -------------M---PP-----------E----ETILTFAEVQGMQEALL-GT---TIMNNIVIWNLKTGQ------- 214 (356)
T ss_dssp -------------C---CC-----------S----SCEEEEEEEETSTTEEE-EE---ETTSEEEEEETTTCC-------
T ss_pred -------------C---CC-----------c----eeeEEeeccCCCCceEE-Ee---cCCCcEEEEECCCCc-------
Confidence 0 00 0 11356677 667776 22 233789999999842
Q ss_pred CCceeeecccc---ceEE-EEEecCCeEEEEeCC--------CCCCceEEEEecCCCCCCCceEee----cCCC-CceeE
Q psy4818 294 FPLKTVIPGMD---HHHE-IIANNGPELIVKTTK--------NAPKGKVVTINLNNPCEKNWKTLI----PEDE-NRTLD 356 (734)
Q Consensus 294 ~~~~~l~~~~~---~~~~-~~s~dg~~l~~~s~~--------~~~~~~l~~~d~~~~~~~~~~~l~----~~~~-~~~~~ 356 (734)
....+..+.. .... .|+|||+.++..+.. ...+..|..+|..++. ...+. +... ...+.
T Consensus 215 -~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk---~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 215 -LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL---SVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp -EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE---EEEEEEECCCTTCCCCEEE
T ss_pred -EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE---EEEEEEeeccCCCcceeEc
Confidence 2233322111 1112 389999877654421 2345678888887764 11111 2221 11221
Q ss_pred EEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCc-eEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 357 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLG-QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g-~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. . .. +.++++...+ ..|++||+.+|+.+..+..+.. .+..+.++||++.++ +.+.. ..++++|+
T Consensus 291 g-~-~s-g~~lASgS~D--gTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D---~TIklWd~ 355 (356)
T 2w18_A 291 G-D-VK-DHCAAAILTS--GTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKD---GNIFVYHY 355 (356)
T ss_dssp E-E-EE-TTEEEEEETT--SCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTT---SCEEEEEE
T ss_pred c-c-cC-CCEEEEEcCC--CcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECC---CcEEEecC
Confidence 1 1 12 3456666555 4799999999998888875533 333467889886554 44332 35777764
No 411
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.42 E-value=3.5e-05 Score=78.18 Aligned_cols=234 Identities=10% Similarity=0.077 Sum_probs=121.6
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEEC
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 175 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl 175 (734)
+.++++.+||+-... ..|++.+..++..+. +... ..+..+.++|||+.++ +. . ..|+++|.
T Consensus 20 w~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~-~~~~-------~~~~~i~~~~dG~l~v-~~--~----~~l~~~d~ 80 (297)
T 3g4e_A 20 WEEVSNSLLFVDIPA----KKVCRWDSFTKQVQR-VTMD-------APVSSVALRQSGGYVA-TI--G----TKFCALNW 80 (297)
T ss_dssp EETTTTEEEEEETTT----TEEEEEETTTCCEEE-EECS-------SCEEEEEEBTTSSEEE-EE--T----TEEEEEET
T ss_pred EECCCCEEEEEECCC----CEEEEEECCCCcEEE-EeCC-------CceEEEEECCCCCEEE-EE--C----CeEEEEEC
Confidence 334467788765333 347777765554433 3222 1267899999999433 33 1 26999999
Q ss_pred CCCCcccccc-----cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCe
Q psy4818 176 DTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS 250 (734)
Q Consensus 176 ~~g~~~~~~~-----~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~ 250 (734)
++|+...... .......++++|||+ |++......... .........||+++.+.. ...+.... .
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~----~~~~~~~~~l~~~d~~g~---~~~~~~~~---~ 149 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAP----AVLERHQGALYSLFPDHH---VKKYFDQV---D 149 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBT----TBCCTTCEEEEEECTTSC---EEEEEEEE---S
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCccccc----ccccCCCcEEEEEECCCC---EEEEeecc---c
Confidence 9887432111 112235689999998 666654321000 000012346888775421 11222221 1
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceE--E-EEEecCCeEEEEeCCCCC
Q psy4818 251 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHH--E-IIANNGPELIVKTTKNAP 326 (734)
Q Consensus 251 ~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~--~-~~s~dg~~l~~~s~~~~~ 326 (734)
...+++|||||+.|++.... ...|++++++. ....+.. .+.+.. ...... . .++++| .||+....
T Consensus 150 ~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~-~~G~~~~---~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~--- 218 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDL-QTGQISN---RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYN--- 218 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGG---GTEEEEEEECT-TTCCEEE---EEEEEECCGGGCEEEEEEEBTTS-CEEEEEET---
T ss_pred cccceEEcCCCCEEEEecCC---CCcEEEEeccC-CCCcccC---cEEEEECCCCCCCCCeeEECCCC-CEEEEEcC---
Confidence 33578999999998775432 26889998742 1111110 011111 001111 1 266777 46665543
Q ss_pred CceEEEEecCCCCCCCceEeecCCCCceeEEEEEe--eCCEEEEEEEeCC
Q psy4818 327 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV--ANNKLIVHYIQNV 374 (734)
Q Consensus 327 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~l~~~~~~~~ 374 (734)
..+|+++|.++++ ....+.-. ...+..+.+. +.+.||++....+
T Consensus 219 ~~~v~~~d~~tG~---~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 219 GGRVIRLDPVTGK---RLQTVKLP-VDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp TTEEEEECTTTCC---EEEEEECS-SSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred CCEEEEEcCCCce---EEEEEECC-CCCceEEEEeCCCCCEEEEEcCCcC
Confidence 2469999998654 23333322 1223444443 3356777665443
No 412
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.41 E-value=1.2e-05 Score=83.71 Aligned_cols=125 Identities=10% Similarity=-0.081 Sum_probs=73.4
Q ss_pred EEeCCCCcEEEEEEeCC-CCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 147 YAFSDNGKHFAYCLSKS-GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~-g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
....|||+++. +.+.. ......|+++|.++++.+.....+.. ..+.+||||+++|.+..-...+ .......
T Consensus 38 ~~~~pd~~~vy-V~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P~va~spDG~~lyVan~~~~r~------~~G~~~~ 109 (386)
T 3sjl_D 38 EAPAPDARRVY-VNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-PNPVVADDGSFIAHASTVFSRI------ARGERTD 109 (386)
T ss_dssp CCCCCCTTEEE-EEECGGGCSSEEEEEEETTTTEEEEEEEECSS-CEEEECTTSSCEEEEEEEEEET------TEEEEEE
T ss_pred eccCCCCCEEE-EEcCcccCCCCEEEEEECCCCeEEEEEECCCC-CcEEECCCCCEEEEEccccccc------ccCCCCC
Confidence 34589999865 44432 11125899999999986543332333 3599999999988765310000 0000123
Q ss_pred EEEEEECCCCCCCCeeEEec------CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 226 KIYYHVLGTEQDKDIPVVEF------PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.|.+++..+......+.... ...+ ..+.+||||++|++.... ..+.|.++|+++
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P---~~~a~spDGk~lyVan~~--~~~~VsVID~~t 169 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYP---WMTSLTPDGKTLLFYQFS--PAPAVGVVDLEG 169 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCG---GGEEECTTSSEEEEEECS--SSCEEEEEETTT
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCC---ceEEEcCCCCEEEEEEcC--CCCeEEEEECCC
Confidence 57888877654221111110 0122 257999999998875321 126899999998
No 413
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.40 E-value=3.9e-07 Score=93.80 Aligned_cols=110 Identities=12% Similarity=-0.003 Sum_probs=75.2
Q ss_pred CCcEEEEecCCCCCc--------CCccc----cHHHHHHHHhcCeE---EEEEecccCCCCCchhhhccccccCCCchhH
Q psy4818 487 RNPVIIYGYGGYGVS--------VLPTF----SISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDD 551 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~--------~~~~~----~~~~~~~l~~~G~~---v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D 551 (734)
..+.||++||..+.. ....| .. +...|.++||. |+.+|+||.+... ... .........++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~-l~~~L~~~Gy~~~~V~~~D~~g~G~S~---~~~-~~~~~~~~~~~ 113 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARS-VYAELKARGYNDCEIFGVTYLSSSEQG---SAQ-YNYHSSTKYAI 113 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSC-HHHHHHHTTCCTTSEEEECCSCHHHHT---CGG-GCCBCHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHH-HHHHHHhCCCCCCeEEEEeCCCCCccC---Ccc-ccCCHHHHHHH
Confidence 344588899976642 12234 33 45667777998 9999999844211 000 00112234677
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy4818 552 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 603 (734)
Q Consensus 552 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 603 (734)
+.+.++.+.++ ...+++.|+|||+||+++..++.++ |+.++.+|+.+|..
T Consensus 114 l~~~I~~l~~~--~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 114 IKTFIDKVKAY--TGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 88888887765 2346899999999999999999987 88999999887754
No 414
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.40 E-value=8.9e-05 Score=78.95 Aligned_cols=209 Identities=8% Similarity=0.006 Sum_probs=116.5
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
....+++|+|||+ .|.++..+ ..|+++|+++++............ ++|+|||+.|+.+....
T Consensus 131 ~~P~~la~d~~g~--lyv~d~~~---~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~------------ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNNT--VLAYQRDD---PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEG------------ 192 (409)
T ss_dssp CCEEEEEECSTTE--EEEEETTT---TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSST------------
T ss_pred CCceEEEEeCCCC--EEEEecCC---CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCC------------
Confidence 3466899999998 34455432 379999999887543222222223 89999999776654311
Q ss_pred cCCcEEEEEECCCCCCCCeeEE-ec-CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVV-EF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~-~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
...|++++..+... .... .. ........+++++|++..|++. .. ...|+++|.+++....+. ... .
T Consensus 193 --~~~I~~~d~~~~~~--~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~---~~~I~~~d~~~~~~~~~~-~~~---~ 260 (409)
T 3hrp_A 193 --THTVYVYMKASGWA--PTRIGQLGSTFSGKIGAVALDETEEWLYFV-DS---NKNFGRFNVKTQEVTLIK-QLE---L 260 (409)
T ss_dssp --TCEEEEEEGGGTTC--EEEEEECCTTSCSCCCBCEECTTSSEEEEE-CT---TCEEEEEETTTCCEEEEE-ECC---C
T ss_pred --CceEEEEEcCCCce--eEEeeeccchhcCCcEEEEEeCCCCeEEEE-EC---CCcEEEEECCCCCEEEEe-ccc---c
Confidence 22788888765432 1122 10 1011123468899977777763 22 358999999873210000 000 0
Q ss_pred eccccce---EEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-C------------CceeEEEEEeeC
Q psy4818 300 IPGMDHH---HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-E------------NRTLDVVAAVAN 363 (734)
Q Consensus 300 ~~~~~~~---~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~------------~~~~~~~~~~~~ 363 (734)
....... .-.|+|+++.||+.... +.+|++++.++. ...+.... . -.....+.+..+
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~---~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQN---LSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETT---TTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCC---CCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 0011111 23488977888876432 457999998753 23332221 0 112345555554
Q ss_pred CEEEEEEEeCCceeEEEEECCCCce
Q psy4818 364 NKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 364 ~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
+.+|++-. .+..+|+++++.+|+.
T Consensus 334 G~lyvad~-~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 334 GNFYIVDG-FKGYCLRKLDILDGYV 357 (409)
T ss_dssp CCEEEEET-TTTCEEEEEETTTTEE
T ss_pred CCEEEEeC-CCCCEEEEEECCCCEE
Confidence 66666532 1346899999767875
No 415
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.39 E-value=4.5e-05 Score=79.09 Aligned_cols=159 Identities=11% Similarity=0.114 Sum_probs=97.1
Q ss_pred EEeeEEeCC--CCcEEEEEEeCCCCceEEEEEEECCCCCccccc--ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 143 ALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 143 ~~~~~~~SP--DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~--~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
.+..++|+| +|++++-... . ..|++||+.+++.+... .....+..++|+|||+.|+....+.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~-d----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------- 192 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADN-R----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------- 192 (343)
T ss_dssp CEEEEECCC---CCEEEEEET-T----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS---------
T ss_pred CEEEEEcCCCCCCCEEEEEeC-C----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC---------
Confidence 478899999 9999886553 2 36999999998864322 1222346889999998777655332
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
.|.+|++.++.... ..+.. .+...+..+.|+|||++|+... . ..|.+||+.++.... ....
T Consensus 193 -------~i~iwd~~~~~~~~-~~~~~-~h~~~v~~l~fs~~g~~l~s~~-~----~~v~iwd~~~~~~~~-----~~~~ 253 (343)
T 3lrv_A 193 -------ILDVYNLSSPDQAS-SRFPV-DEEAKIKEVKFADNGYWMVVEC-D----QTVVCFDLRKDVGTL-----AYPT 253 (343)
T ss_dssp -------CEEEEESSCTTSCC-EECCC-CTTSCEEEEEECTTSSEEEEEE-S----SBEEEEETTSSTTCB-----SSCC
T ss_pred -------EEEEEECCCCCCCc-cEEec-cCCCCEEEEEEeCCCCEEEEEe-C----CeEEEEEcCCCCcce-----eecc
Confidence 68899998764320 12322 1334677899999999988544 2 279999998732110 0110
Q ss_pred eecc-cc--ceEEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 299 VIPG-MD--HHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 299 l~~~-~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
+... .. ...-.|+|+|+.|+..+..+ ..+..+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d---~~i~v~~~~~ 292 (343)
T 3lrv_A 254 YTIPEFKTGTVTYDIDDSGKNMIAYSNES---NSLTIYKFDK 292 (343)
T ss_dssp CBC-----CCEEEEECTTSSEEEEEETTT---TEEEEEEECT
T ss_pred cccccccccceEEEECCCCCEEEEecCCC---CcEEEEEEcc
Confidence 0000 00 11123899999877655422 2466666644
No 416
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.38 E-value=6.9e-05 Score=75.95 Aligned_cols=207 Identities=10% Similarity=0.060 Sum_probs=112.9
Q ss_pred CcEEEeeEEeCCC--CcEEEEEEeCCCCceEEEEEEECCCCCcccc---cccccccCeeEEEcC--CcEEEEEEEecCCC
Q psy4818 140 GTTALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHD--HKGFFYNQYCDING 212 (734)
Q Consensus 140 ~~~~~~~~~~SPD--G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~---~~~~~~~~~~~wSpD--g~~l~y~~~~~~~~ 212 (734)
+...+..++|||+ |++||-... ...|++||+.+++.... ......+..++|+|| |+.|+....+.
T Consensus 52 H~~~V~~v~~s~~~~g~~l~s~s~-----D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~--- 123 (297)
T 2pm7_B 52 HEGPVWRVDWAHPKFGTILASCSY-----DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG--- 123 (297)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEET-----TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS---
T ss_pred ccCCeEEEEecCCCcCCEEEEEcC-----CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC---
Confidence 3345788999974 888875543 24799999998853211 112223468999998 77777655432
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecC-------------CcEEEEEEecCCCCceEEE
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC-------------GRYLLVSTSNNTQGSDLHY 279 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD-------------G~~l~~~~~~~~~~~~i~~ 279 (734)
.|.++++.+........+.. +...+..+.|+|+ +++|+. .. ....|.+
T Consensus 124 -------------~v~~wd~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s-gs---~D~~v~l 184 (297)
T 2pm7_B 124 -------------KVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGTKESRKFVT-GG---ADNLVKI 184 (297)
T ss_dssp -------------EEEEEEBCSSSCBCCEEEEC--CSSCEEEEEECCCC------------CCEEEE-EE---TTSCEEE
T ss_pred -------------cEEEEEecCCCceeeeeeec--ccCccceEeecCCcccccccCCCCCCcceEEE-Ec---CCCcEEE
Confidence 68888887653222233332 2334667899997 456653 22 2257888
Q ss_pred EeCCCCCCCcccCCCCceeeeccccceEEE-EEecC--CeEEEEeCCCCCCceEEEEecCCCCCCCce-Eeec-CCCCce
Q psy4818 280 FDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNG--PELIVKTTKNAPKGKVVTINLNNPCEKNWK-TLIP-EDENRT 354 (734)
Q Consensus 280 ~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~-~l~~-~~~~~~ 354 (734)
||+.++.. .. .....+..+....... |+|++ ..+++.... +..|.++++++... .+. .++. ......
T Consensus 185 wd~~~~~~-~~---~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~---D~~v~iWd~~~~~~-~~~~~~~~~~~~~~~ 256 (297)
T 2pm7_B 185 WKYNSDAQ-TY---VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ---DRTCIIWTQDNEQG-PWKKTLLKEEKFPDV 256 (297)
T ss_dssp EEEETTTT-EE---EEEEEECCCSSCEEEEEECCCCSSSEEEEEEET---TSCEEEEEESSTTS-CCEEEESSSSCCSSC
T ss_pred EEEcCCCc-eE---EEEEEecCCCCceEEEEECCCCCCceEEEEEEC---CCcEEEEEeCCCCC-ccceeeeecccCCCc
Confidence 98876211 00 0011122222333333 89986 333333332 34577888765321 122 2332 121234
Q ss_pred eEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 355 LDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
+..+.+..++.++++...++ .|.+|+.
T Consensus 257 v~~~~~s~~g~~las~~~D~--~v~lw~~ 283 (297)
T 2pm7_B 257 LWRASWSLSGNVLALSGGDN--KVTLWKE 283 (297)
T ss_dssp EEEEEECSSSCCEEEEETTS--CEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCC--cEEEEEE
Confidence 44555554466666666664 5666665
No 417
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.38 E-value=0.00029 Score=74.28 Aligned_cols=226 Identities=7% Similarity=-0.010 Sum_probs=134.7
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISW 195 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~w 195 (734)
|++.+..++....++..- ....++.|++++++|.|+-... ..|+.++++++........+ ....++++
T Consensus 98 I~~i~~~~~~~~~~~~~~-------~~~~gl~~d~~~~~ly~~D~~~----~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 98 IRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDVTL----DRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp EEEECTTSCCCEEEECSC-------SCEEEEEEETTTTEEEEEETTT----TEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred ceeeccCCCcEEEEecCC-------CccEEEEEecCCCeEEEEeCCC----CcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 566655444445554321 1256899999888887764332 36999999887532221111 12357889
Q ss_pred EcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCc
Q psy4818 196 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGS 275 (734)
Q Consensus 196 SpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 275 (734)
.+.+..||++... ..+|++.++++.. ...+.... ...-.+++++|++.+|+++... ...
T Consensus 167 d~~~g~lY~~d~~---------------~~~I~~~~~dg~~--~~~l~~~~--l~~P~giavdp~~g~ly~td~~--~~~ 225 (386)
T 3v65_B 167 DWVHDKLYWTDSG---------------TSRIEVANLDGAH--RKVLLWQS--LEKPRAIALHPMEGTIYWTDWG--NTP 225 (386)
T ss_dssp ETTTTEEEEEETT---------------TTEEEECBTTSCS--CEEEECSS--CSCEEEEEEETTTTEEEEEECS--SSC
T ss_pred EeCCCeEEEEcCC---------------CCeEEEEeCCCCc--eEEeecCC--CCCCcEEEEEcCCCeEEEeccC--CCC
Confidence 8888888876531 2378888876543 22232221 1233578999999999876532 236
Q ss_pred eEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
.|+++++++. ....++. +...-.. .+++++++||+.-. ...+|+++++++.. .+.++... ..
T Consensus 226 ~I~r~~~dG~---------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~~~-~~ 289 (386)
T 3v65_B 226 RIEASSMDGS---------GRRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH---RKAVISQG-LP 289 (386)
T ss_dssp EEEEEETTSC---------SCEEEECSSCSCEEEEEEEGGGTEEEEEET---TTTEEEEECTTSCS---CEEEECSS-CS
T ss_pred EEEEEeCCCC---------CcEEEEECCCCCeeeEEEeCCCCEEEEEEC---CCCEEEEEeCCCCe---eEEEEECC-CC
Confidence 8999999871 1122222 1111122 38888999998643 34679999998654 24444433 22
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
...++.+ +++.+|++.. +...|.+++..+|+..+.|.
T Consensus 290 ~P~giav-~~~~ly~td~--~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 290 HPFAITV-FEDSLYWTDW--HTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp SEEEEEE-ETTEEEEEET--TTTEEEEEETTTCCSCEEEE
T ss_pred CceEEEE-ECCEEEEeeC--CCCeEEEEECCCCcceEEEc
Confidence 2344555 4478887653 33578888865787655543
No 418
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.38 E-value=0.00034 Score=72.02 Aligned_cols=245 Identities=11% Similarity=0.103 Sum_probs=134.6
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCc---------------------eEEEEEEECCCCCcccccccc--cccCeeEEEcCC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSD---------------------WNTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDH 199 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~---------------------~~~l~v~dl~~g~~~~~~~~~--~~~~~~~wSpDg 199 (734)
.+.+++++|||+.++. +..+.. ...|+++|.++|+.+...... ....+++++|||
T Consensus 25 ~v~~va~d~~G~l~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIF--HRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEE--ECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEE--eCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3778999999986643 322211 026999999988864322111 123578999999
Q ss_pred cEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec-------CCCCeeEEEEEEecCCcEEEEEEecCC
Q psy4818 200 KGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF-------PNGRSLGLHSEVTDCGRYLLVSTSNNT 272 (734)
Q Consensus 200 ~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~-------~~~~~~~~~~~~SpDG~~l~~~~~~~~ 272 (734)
+ ||++.. ...+|++++..+... .+..+.. ......-.+++++|++..|++... .
T Consensus 103 ~-l~v~d~---------------~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~--~ 163 (329)
T 3fvz_A 103 N-YWVTDV---------------ALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG--Y 163 (329)
T ss_dssp C-EEEEET---------------TTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC--S
T ss_pred C-EEEEEC---------------CCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC--C
Confidence 8 554432 123788888754321 1222211 111113467899994444554432 1
Q ss_pred CCceEEEEeCCCCCCCcccCCCCceeeecc-----------ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCC
Q psy4818 273 QGSDLHYFDLHSLPDGKISGKFPLKTVIPG-----------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE 340 (734)
Q Consensus 273 ~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~-----------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 340 (734)
....|++++.++ . ....+.. ...-.. .+++++..||+.... +.+|.+++.+++.
T Consensus 164 ~~~~I~~~~~~g-~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~---~~~I~~~~~~~G~- 229 (329)
T 3fvz_A 164 CNSRIVQFSPSG-K---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE---NGRIQCFKTDTKE- 229 (329)
T ss_dssp SCCEEEEECTTS-C---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---TTEEEEEETTTCC-
T ss_pred CCCeEEEEcCCC-C---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---CCEEEEEECCCCc-
Confidence 236899998654 1 1111110 011122 278887777775432 4579999988554
Q ss_pred CCceEeec-CCCCceeEEEEEeeCCEEEEEEEe-----CCceeEEEEECCCCceeeeeC---CCCceEEeeccCcccceE
Q psy4818 341 KNWKTLIP-EDENRTLDVVAAVANNKLIVHYIQ-----NVRSVMDLHDLNTGKRLHSFP---LDLGQITHISGRRKYNEV 411 (734)
Q Consensus 341 ~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~l~~~dl~~g~~~~~l~---~~~g~v~~~~~~~d~~~l 411 (734)
+...+. .........+.+.. +.++..... .....+++|++.+|+.+..+. .......++.+++++ .+
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~l 305 (329)
T 3fvz_A 230 --FVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TV 305 (329)
T ss_dssp --EEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EE
T ss_pred --EEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CE
Confidence 233332 21122223333333 444433221 122479999998898877763 223345677788887 66
Q ss_pred EEEEecCCCCceEEEEeC
Q psy4818 412 FYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 412 ~~~~ss~~~P~~~~~~d~ 429 (734)
+++-... ..|+++++
T Consensus 306 yvad~~~---~~I~~~~~ 320 (329)
T 3fvz_A 306 YIGDAHT---NTVWKFTL 320 (329)
T ss_dssp EEEESSS---CCEEEEEE
T ss_pred EEEECCC---CEEEEEeC
Confidence 6654432 37888887
No 419
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.36 E-value=7.6e-07 Score=86.82 Aligned_cols=90 Identities=10% Similarity=0.025 Sum_probs=60.7
Q ss_pred CCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCC
Q psy4818 487 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 566 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 566 (734)
..|.|+++||..+... .|.. +...|. . +.|+.+|++|.+. ..+|+.+.++.+..
T Consensus 16 ~~~~l~~~hg~~~~~~--~~~~-~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~----- 69 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGL--MYQN-LSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQP----- 69 (230)
T ss_dssp CSEEEEEECCTTCCGG--GGHH-HHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHCC-----
T ss_pred CCCCEEEECCCCCchH--HHHH-HHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhCC-----
Confidence 3578899999765443 3333 345554 3 9999999997321 13466666655521
Q ss_pred CCcEEEEEcChHHHHHHHHHhcC---CCceeEEEEcCCc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGA 602 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~ 602 (734)
.+++.++|||+||.++..++.+. ++.++.+|+..+.
T Consensus 70 ~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 70 EGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 24699999999999999988764 3567777766554
No 420
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.34 E-value=0.00035 Score=74.94 Aligned_cols=226 Identities=12% Similarity=0.156 Sum_probs=131.5
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCc
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 225 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 225 (734)
.++++||++|+..... ..|++||+.+++.+..... ...+..+.| |++.|+....+.
T Consensus 137 ~~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg---------------- 193 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDS---------------- 193 (435)
T ss_dssp EEEECCSSEEEEEESS-----SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS----------------
T ss_pred EEEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCC----------------
Confidence 3556699999876542 3699999999885432222 112244555 888777665432
Q ss_pred EEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc
Q psy4818 226 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 305 (734)
Q Consensus 226 ~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~ 305 (734)
.|.++++.++.. +..+. .+...+..+.|++ ..|+... ....|.+||+.++.. ........+...
T Consensus 194 ~i~vwd~~~~~~--~~~~~--~h~~~v~~l~~~~--~~l~s~s----~dg~i~vwd~~~~~~------~~~~~~~~~~~~ 257 (435)
T 1p22_A 194 TVRVWDVNTGEM--LNTLI--HHCEAVLHLRFNN--GMMVTCS----KDRSIAVWDMASPTD------ITLRRVLVGHRA 257 (435)
T ss_dssp CEEEEESSSCCE--EEEEC--CCCSCEEEEECCT--TEEEEEE----TTSCEEEEECSSSSC------CEEEEEECCCSS
T ss_pred eEEEEECCCCcE--EEEEc--CCCCcEEEEEEcC--CEEEEee----CCCcEEEEeCCCCCC------ceeeeEecCCCC
Confidence 688899887642 22222 2333456677764 4554322 225799999987321 011122222223
Q ss_pred eEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCC
Q psy4818 306 HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT 385 (734)
Q Consensus 306 ~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~ 385 (734)
....+..+++.++..+. +..|..+|+.++. ....+... ...+..+.+ + +.++++...+ ..|.+||+.+
T Consensus 258 ~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~---~~~~~~~~-~~~v~~~~~-~-~~~l~~g~~d--g~i~iwd~~~ 325 (435)
T 1p22_A 258 AVNVVDFDDKYIVSASG----DRTIKVWNTSTCE---FVRTLNGH-KRGIACLQY-R-DRLVVSGSSD--NTIRLWDIEC 325 (435)
T ss_dssp CEEEEEEETTEEEEEET----TSEEEEEETTTCC---EEEEEECC-SSCEEEEEE-E-TTEEEEEETT--SCEEEEETTT
T ss_pred cEEEEEeCCCEEEEEeC----CCeEEEEECCcCc---EEEEEcCC-CCcEEEEEe-C-CCEEEEEeCC--CeEEEEECCC
Confidence 33334558887776554 3569999998765 23233332 233444444 4 3455555555 4799999988
Q ss_pred CceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 386 GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 386 g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|+.+..+......+..+.+ ++..++ +.+.. +.+..+|+
T Consensus 326 ~~~~~~~~~h~~~v~~~~~--~~~~l~-sg~~d---g~i~vwd~ 363 (435)
T 1p22_A 326 GACLRVLEGHEELVRCIRF--DNKRIV-SGAYD---GKIKVWDL 363 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEE-EEETT---SCEEEEEH
T ss_pred CCEEEEEeCCcCcEEEEEe--cCCEEE-EEeCC---CcEEEEEC
Confidence 9887888766666767766 444443 33332 46888888
No 421
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.31 E-value=0.00081 Score=69.74 Aligned_cols=225 Identities=7% Similarity=-0.002 Sum_probs=133.6
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISW 195 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~w 195 (734)
|++.+..+...+.++..- ....++.|+++++.|.|+-... ..|+.++++++........+ ....++++
T Consensus 55 I~~i~~~g~~~~~~~~~~-------~~~~~l~~d~~~~~ly~~D~~~----~~I~r~~~~g~~~~~~~~~~~~~p~glav 123 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDVTL----DRILRANLNGSNVEEVVSTGLESPGGLAV 123 (349)
T ss_dssp EEEECTTSCCEEEEECSC-------SCEEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred eEEEeCCCCeeEEeecCC-------CceEEEEEeccccEEEEEeccC----CceEEEecCCCCceEEEeCCCCCccEEEE
Confidence 666665444444444311 1256889999988887764332 36999999887633221111 12357888
Q ss_pred EcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCc
Q psy4818 196 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGS 275 (734)
Q Consensus 196 SpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 275 (734)
.+.+..||++... ...|++.++++... ..+.... ...-.+++++|++.+|+++... ...
T Consensus 124 d~~~g~ly~~d~~---------------~~~I~~~~~dG~~~--~~l~~~~--l~~P~~iavdp~~g~ly~td~~--~~~ 182 (349)
T 3v64_C 124 DWVHDKLYWTDSG---------------TSRIEVANLDGAHR--KVLLWQS--LEKPRAIALHPMEGTIYWTDWG--NTP 182 (349)
T ss_dssp ETTTTEEEEEETT---------------TTEEEEEETTSCSC--EEEECTT--CSCEEEEEEETTTTEEEEEECS--SSC
T ss_pred ecCCCeEEEEcCC---------------CCeEEEEcCCCCce--EEEEeCC--CCCcceEEEecCcCeEEEeccC--CCC
Confidence 8888888887531 23788888876432 2233221 1133578999999998887542 236
Q ss_pred eEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 276 DLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 276 ~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
.|+++++++. . ...++. +...-.. .+++++++||+.-. ...+|+++++++.. .+.++... ..
T Consensus 183 ~I~r~~~dG~-~--------~~~~~~~~~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~~---~~~~~~~~-~~ 246 (349)
T 3v64_C 183 RIEASSMDGS-G--------RRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH---RKAVISQG-LP 246 (349)
T ss_dssp EEEEEETTSC-S--------CEESCCSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEECSS-CS
T ss_pred EEEEEeCCCC-C--------cEEEEECCCCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCCc---eEEEEeCC-CC
Confidence 8999999872 1 122221 1111112 38888899998643 24579999998754 24444433 22
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
...++.+. ++.+|++-. +...|.+++..+|+..+.+
T Consensus 247 ~P~giav~-~~~ly~td~--~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 247 HPFAITVF-EDSLYWTDW--HTKSINSANKFTGKNQEII 282 (349)
T ss_dssp SEEEEEEE-TTEEEEEET--TTTEEEEEETTTCCSCEEE
T ss_pred CceEEEEE-CCEEEEecC--CCCeEEEEEccCCCccEEe
Confidence 23344454 478877643 3357888886577765544
No 422
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.30 E-value=3.2e-06 Score=74.20 Aligned_cols=83 Identities=7% Similarity=-0.049 Sum_probs=56.4
Q ss_pred CcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCCCC
Q psy4818 488 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 567 (734)
Q Consensus 488 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 567 (734)
.|.||++| +... .|... |++ +|.|+.+|+||.|.... . .. . ++++.+.+..+++. .+.
T Consensus 22 ~~~vv~~H-~~~~----~~~~~----l~~-~~~v~~~d~~G~G~s~~---~-----~~-~-~~~~~~~~~~~~~~--~~~ 79 (131)
T 2dst_A 22 GPPVLLVA-EEAS----RWPEA----LPE-GYAFYLLDLPGYGRTEG---P-----RM-A-PEELAHFVAGFAVM--MNL 79 (131)
T ss_dssp SSEEEEES-SSGG----GCCSC----CCT-TSEEEEECCTTSTTCCC---C-----CC-C-HHHHHHHHHHHHHH--TTC
T ss_pred CCeEEEEc-CCHH----HHHHH----HhC-CcEEEEECCCCCCCCCC---C-----CC-C-HHHHHHHHHHHHHH--cCC
Confidence 57899999 2221 22221 554 79999999999554321 1 01 1 66666666655554 244
Q ss_pred CcEEEEEcChHHHHHHHHHhcCCCc
Q psy4818 568 KYITIMGGSNGGLLVGACLNQRPEL 592 (734)
Q Consensus 568 ~ri~i~G~S~GG~~~~~~~~~~p~~ 592 (734)
+++.++|+|+||.++..++.++|.+
T Consensus 80 ~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 80 GAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp CSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred CccEEEEEChHHHHHHHHHhcCCcE
Confidence 6899999999999999999999963
No 423
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.29 E-value=1.8e-05 Score=91.66 Aligned_cols=246 Identities=9% Similarity=0.020 Sum_probs=136.8
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCC--CcEEEEEEeCCCCceEEEEEE
Q psy4818 96 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIK 173 (734)
Q Consensus 96 p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPD--G~~la~~~~~~g~~~~~l~v~ 173 (734)
..++|.+++-...+ ..-.+|-... +..+.+... .++...+..++|||+ |++|+.+.. + ..|++|
T Consensus 17 ~s~dg~~latg~~d---g~I~vwd~~~--~~~~~~~~l----~~h~~~V~~l~~s~~~~~~~l~s~s~-D----g~I~vw 82 (753)
T 3jro_A 17 LDYYGKRLATCSSD---KTIKIFEVEG--ETHKLIDTL----TGHEGPVWRVDWAHPKFGTILASCSY-D----GKVLIW 82 (753)
T ss_dssp CCSSSCCEEEEETT---TEEEEEEEET--TEEEEEEEE----CCCSSCEEEEEECCTTSCSEEEEEET-T----SCEEEE
T ss_pred ECCCCCeEEEEECC---CcEEEEecCC--CCCccceec----cCCcCceEEEEecCCCCCCEEEEEeC-C----CeEEEE
Confidence 34677766654322 2345564432 222222211 123345889999999 998886654 2 359999
Q ss_pred ECCCCCc--cc-ccccccccCeeEEEcC--CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC
Q psy4818 174 DVDTGKD--YP-EVLKNVKFPSISWTHD--HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 248 (734)
Q Consensus 174 dl~~g~~--~~-~~~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~ 248 (734)
|+.+++. +. .......+..+.|+|+ |+.|+....+. .|+++++.+........... +
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg----------------~I~vwdl~~~~~~~~~~~~~--~ 144 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG----------------KVSVVEFKENGTTSPIIIDA--H 144 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS----------------EEEEEECCSSSCCCCEEEEC--C
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC----------------cEEEEEeecCCCcceeEeec--C
Confidence 9998862 21 1112223468999999 88887776432 78899988764333333332 3
Q ss_pred CeeEEEEEEec-------------CCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEec-
Q psy4818 249 RSLGLHSEVTD-------------CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANN- 313 (734)
Q Consensus 249 ~~~~~~~~~Sp-------------DG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~d- 313 (734)
...+..+.|+| ||+.|+.... ...|++||+.++... . .....+..+....... |+|+
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~----dg~I~iwd~~~~~~~-~---~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQT-Y---VLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEET----TSCEEEEEEETTTTE-E---EEEEEECCCSSCEEEEEECCCC
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEEC----CCeEEEEeccCCccc-c---eeeeeecCCCCcEEEEEeccCC
Confidence 33567889999 5888775432 256899998763110 0 0011122222233333 8999
Q ss_pred --CCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-CCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCc
Q psy4818 314 --GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK 387 (734)
Q Consensus 314 --g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~ 387 (734)
|+.++..+. ++.|..||+.++.......+... .....+..+.+..++..+++...+ ..|++|++.++.
T Consensus 217 ~~~~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D--g~I~vwd~~~~~ 287 (753)
T 3jro_A 217 LLRSYLASVSQ----DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--NKVTLWKENLEG 287 (753)
T ss_dssp SSSEEEEEEES----SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS--SCEECCBCCSSS
T ss_pred CCCCEEEEEec----CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC--CEEEEEecCCCC
Confidence 565554443 24588888876531111122221 112334444554446666666555 468899986443
No 424
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.27 E-value=5.6e-05 Score=80.12 Aligned_cols=246 Identities=9% Similarity=-0.029 Sum_probs=124.5
Q ss_pred CCCCcEEEEEEeCCCCc-eEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEE
Q psy4818 150 SDNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 228 (734)
Q Consensus 150 SPDG~~la~~~~~~g~~-~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~ 228 (734)
.||++++ |+.+.+... ...|.++|+++++.+....-+... ++.+||||++||.+....... ........|.
T Consensus 81 ~~~~~~v-yV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~------~~G~~~~~Vs 152 (426)
T 3c75_H 81 APDARRV-YIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERI------ARGKRTDYVE 152 (426)
T ss_dssp CCCTTEE-EEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEET------TEEEEEEEEE
T ss_pred CCCCCEE-EEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEecccccc------ccCCCCCEEE
Confidence 5788875 555543211 168999999999876433333344 899999999998776311000 0000123677
Q ss_pred EEECCCCCCCCeeEEe-c-----CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 229 YHVLGTEQDKDIPVVE-F-----PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 229 ~~~l~t~~~~~~~v~~-~-----~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
+++..+......+... . ...+ .++.+||||++|++.... ..+.|.++|+.++. ....+.-
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P---~~~~~spDGk~lyV~n~~--~~~~VsVID~~t~k---------vv~~I~v 218 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQ---WMNALTPDNKNLLFYQFS--PAPAVGVVDLEGKT---------FDRMLDV 218 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCG---GGSEECTTSSEEEEEECS--SSCEEEEEETTTTE---------EEEEEEC
T ss_pred EEECCCCcEEEEEECCCccccccCCCc---ceEEEcCCCCEEEEEecC--CCCeEEEEECCCCe---------EEEEEEc
Confidence 7777765422111111 0 0112 257899999999876421 23689999998821 1111110
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE----eecCCCCce-eEEEEEeeCCEEEEEEEeCCcee
Q psy4818 303 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT----LIPEDENRT-LDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 303 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~----l~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
. ......|+|+..|+.... ++++..+++.++. ... ++.-..... .......+++++++... . ..
T Consensus 219 -~-g~~~~~p~g~~~~v~~~~---dG~~~~V~~~~~~---v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~--g~ 287 (426)
T 3c75_H 219 -P-DCYHIFPASPTVFYMNCR---DGSLARVDFADGE---TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-T--GK 287 (426)
T ss_dssp -C-SEEEEEEEETTEEEEEET---TSSEEEEECCTTC---CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-T--SE
T ss_pred -C-CceeeccCCCcEEEEEcC---CCCEEEEECCCCc---EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-C--Cc
Confidence 0 111244555555444332 2345555553332 110 111111111 11111223356665542 2 47
Q ss_pred EEEEECCCCceeeeeC---C------CCceE----EeeccCcccceEEEEEecCC------CCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFP---L------DLGQI----THISGRRKYNEVFYGFTSFL------QPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~---~------~~g~v----~~~~~~~d~~~l~~~~ss~~------~P~~~~~~d~ 429 (734)
++++|+.+++. ..+. . ..+.. ..+.++++++++|+...... ....+..+|+
T Consensus 288 V~ViD~~~~~~-~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 288 IFQADLTAEGA-TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEECSSCE-EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEeccCCce-EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 89998854432 1111 0 01111 12456788888888764321 1246999999
No 425
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.26 E-value=0.00027 Score=72.78 Aligned_cols=224 Identities=10% Similarity=-0.027 Sum_probs=127.8
Q ss_pred EEEEeCC--CCceEEEEEEECCCCCccccccc-----c--cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEE
Q psy4818 157 AYCLSKS--GSDWNTLHIKDVDTGKDYPEVLK-----N--VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 227 (734)
Q Consensus 157 a~~~~~~--g~~~~~l~v~dl~~g~~~~~~~~-----~--~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l 227 (734)
+|.+..+ |.+...|.++|.++++....... . ....++.+ +++.+|.+... ...|
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~---------------~~~v 66 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN---------------SHVI 66 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG---------------GTEE
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcC---------------CCEE
Confidence 3555544 34456899999999985432110 0 00123443 56777766532 2378
Q ss_pred EEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc----
Q psy4818 228 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM---- 303 (734)
Q Consensus 228 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~---- 303 (734)
.+++..+.... ..+.... ....+++++|| .|++... ....|+++|++++. + ...+..+.
T Consensus 67 ~viD~~t~~~~--~~i~~~~---~p~~i~~~~~g-~lyv~~~---~~~~v~~iD~~t~~---~-----~~~i~~g~~~~~ 129 (328)
T 3dsm_A 67 FAIDINTFKEV--GRITGFT---SPRYIHFLSDE-KAYVTQI---WDYRIFIINPKTYE---I-----TGYIECPDMDME 129 (328)
T ss_dssp EEEETTTCCEE--EEEECCS---SEEEEEEEETT-EEEEEEB---SCSEEEEEETTTTE---E-----EEEEECTTCCTT
T ss_pred EEEECcccEEE--EEcCCCC---CCcEEEEeCCC-eEEEEEC---CCCeEEEEECCCCe---E-----EEEEEcCCcccc
Confidence 88898876421 1122222 33567899999 5555431 23689999998731 0 11111111
Q ss_pred --cceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC-------
Q psy4818 304 --DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV------- 374 (734)
Q Consensus 304 --~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~------- 374 (734)
....-.+ +++++|+... +....|.++|+++.+ +...++.. .. ...+.+..++++++....+.
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~--~~~~~v~viD~~t~~---~~~~i~~g-~~-p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCW--SYQNRILKIDTETDK---VVDELTIG-IQ-PTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEEC--TTCCEEEEEETTTTE---EEEEEECS-SC-BCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CCCcceEEE--ECCEEEEEcC--CCCCEEEEEECCCCe---EEEEEEcC-CC-ccceEEcCCCCEEEEECCCccCCcccc
Confidence 1111113 6788887643 113469999998765 23333322 11 12333444467777654321
Q ss_pred -ceeEEEEECCCCceeeeeCCCCc-eEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 375 -RSVMDLHDLNTGKRLHSFPLDLG-QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 375 -~~~l~~~dl~~g~~~~~l~~~~g-~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
...|+++|.++++..+.+..+.+ ....+.++++++.+++..+ .++++|+
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~ 251 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPV 251 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEET
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEEC
Confidence 25799999988887666665422 3457888888888876532 7999999
No 426
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.26 E-value=5.7e-07 Score=95.61 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=75.8
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCe---EEEEEecccCCCC----------Cchhhhccc-----------
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG---IYAIPNIRGGGEL----------GEDWHNAGR----------- 541 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~rG~~~~----------g~~~~~~~~----------- 541 (734)
...|.||++||..+... .|.. +...|+++|| .|+++|+||.|.. |. ....+.
T Consensus 20 ~~~ppVVLlHG~g~s~~--~w~~-la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~-~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG--QFES-QGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGL-GSEFGLNISQIIDPETL 95 (484)
T ss_dssp -CCCCEEEECCTTCCGG--GGHH-HHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTG-GGHHHHHHGGGSCHHHH
T ss_pred CCCCEEEEECCCCCCHH--HHHH-HHHHHHHcCCCcceEEEEECCCCCcccccccccccccc-ccccccccccccccccc
Confidence 35678899999865543 3443 4566777899 6999999995421 00 000000
Q ss_pred --------cccCCCchhHHHHHHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCC---ceeEEEEcCCcch
Q psy4818 542 --------LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALD 604 (734)
Q Consensus 542 --------~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d 604 (734)
.......++++.+.++.++++ ...+++.++|||+||.+++.++.++|+ .++++|+.+|..+
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~--lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAE--SGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 001123456777777777765 233689999999999999999999873 7899998887654
No 427
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.25 E-value=0.00033 Score=69.37 Aligned_cols=235 Identities=10% Similarity=0.077 Sum_probs=124.1
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
...++.++|||+ |.++.+..+ ..|+++|..++......... ....++++++||+ |+++..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-------------- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMY---GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-------------- 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSS---CEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET--------------
T ss_pred CccceEECCCCC-EEEEccCCC---CcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC--------------
Confidence 356789999998 444243222 46888988766532211111 2336789999997 555432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...|++++..+... ..+... ......++.++|||+ |++... ....|++++..+.. . ......
T Consensus 86 --~~~i~~~d~~~~~~---~~~~~~-~~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~~~~-~-------~~~~~~ 147 (270)
T 1rwi_B 86 --NNRVVTLAAGSNNQ---TVLPFD-GLNYPEGLAVDTQGA-VYVADR---GNNRVVKLAAGSKT-Q-------TVLPFT 147 (270)
T ss_dssp --TTEEEEECTTCSCC---EECCCC-SCSSEEEEEECTTCC-EEEEEG---GGTEEEEECTTCCS-C-------EECCCC
T ss_pred --CCEEEEEeCCCceE---eeeecC-CcCCCcceEECCCCC-EEEEEC---CCCEEEEEECCCce-e-------Eeeccc
Confidence 22688888765432 111111 112346789999998 444322 22578888765411 0 000011
Q ss_pred cccceE-EEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
...... -.++++|+ +|+.... ...|++++.++.. ..............+.+..++.+++.... ...|++
T Consensus 148 ~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~~~~----~~~~~~~~~~~p~~i~~d~~g~l~v~~~~--~~~v~~ 217 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGN-VYVTDTD---NNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHN--TNQVVK 217 (270)
T ss_dssp SCCSCCCEEECTTCC-EEEEEGG---GTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETT--TSCEEE
T ss_pred cCCCceeEEEeCCCC-EEEEECC---CCEEEEEecCCCc----eEeecccCCCCceEEEECCCCCEEEEECC--CCcEEE
Confidence 111111 13677776 6665432 3469999987654 22222221133445555554577766533 357999
Q ss_pred EECCCCceeeeeCCC-CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.. +.....+... .....++..++++. ++++.... ..+..+++
T Consensus 218 ~~~~-~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~---~~v~~~~~ 262 (270)
T 1rwi_B 218 LLAG-STTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN---DRVVKLTS 262 (270)
T ss_dssp ECTT-CSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG---TEEEEECC
T ss_pred EcCC-CCcceeeccCCCCCceeEEECCCCC-EEEEECCC---CEEEEEcC
Confidence 9984 4432333222 23455677777774 66665433 36888887
No 428
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.25 E-value=3.3e-05 Score=83.11 Aligned_cols=117 Identities=11% Similarity=0.016 Sum_probs=75.5
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCC--------Ccc---cccc-cccccCeeEEEcC-CcEEEEEEEec
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--------KDY---PEVL-KNVKFPSISWTHD-HKGFFYNQYCD 209 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g--------~~~---~~~~-~~~~~~~~~wSpD-g~~l~y~~~~~ 209 (734)
.+..++|||||++||.... .|+....|++||+.++ +.+ .... ....+..++|+|+ ++.|+-...+.
T Consensus 94 ~v~~l~~spdg~~lav~~~-sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMM-SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEE-ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEe-ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 3788999999999997542 2345578999998765 111 1111 1223468999998 55555554322
Q ss_pred CCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 210 INGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
.|++|++.++. .+.....+...+..++|||||++|+.... ...|.+||+..
T Consensus 173 ----------------~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~lasgs~----dg~v~iwd~~~ 223 (434)
T 2oit_A 173 ----------------SIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQLAVGKQ----NGTVVQYLPTL 223 (434)
T ss_dssp ----------------CEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSCEEEEET----TSCEEEECTTC
T ss_pred ----------------eEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCEEEEEcC----CCcEEEEccCC
Confidence 68888887652 12221122335678999999999986442 25799999873
No 429
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.24 E-value=1.2e-06 Score=90.10 Aligned_cols=207 Identities=10% Similarity=-0.018 Sum_probs=104.2
Q ss_pred EEEEecC--CCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHH-HHHHHcCCCC
Q psy4818 490 VIIYGYG--GYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAA-EYMINKKYTK 566 (734)
Q Consensus 490 ~vv~~hG--g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 566 (734)
.|+++|| +.+. ...|.. +...|. .++.|+.+|.||.|....+.. .....+++++.+.+ +.+... ..
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~-l~~~L~-~~~~v~~~d~~G~g~~~~~~~-----~~~~~~~~~~a~~~~~~i~~~--~~ 159 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLR-LSTSFQ-EERDFLAVPLPGYGTGTGTGT-----ALLPADLDTALDAQARAILRA--AG 159 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHH-HHHTTT-TTCCEEEECCTTCCBC---CB-----CCEESSHHHHHHHHHHHHHHH--HT
T ss_pred cEEEeCCCCCCCc--HHHHHH-HHHhcC-CCCceEEecCCCCCCCccccc-----CCCCCCHHHHHHHHHHHHHHh--cC
Confidence 7899997 3332 223443 445565 599999999999543100000 01123344444332 222221 12
Q ss_pred CCcEEEEEcChHHHHHHHHHhcC----CCceeEEEEcCCcchhccc-c-cc--ccCcccccccCCCCCHHHHHHHHhCCc
Q psy4818 567 PKYITIMGGSNGGLLVGACLNQR----PELYGAALILVGALDMLRF-N-KF--TIAYYSESEFGSPNNKTHFHNLLSYSP 638 (734)
Q Consensus 567 ~~ri~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~~~-~-~~--~~~~~~~~~~g~~~~~~~~~~~~~~sp 638 (734)
..++.++|+|+||.++..++.+. ++.++.+|+..+....... . .+ .+...+....-.+.....+..+..+.-
T Consensus 160 ~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (319)
T 2hfk_A 160 DAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYAR 239 (319)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHH
Confidence 35699999999999999998775 3457777766553211000 0 00 000000000111111222221111100
Q ss_pred ---cCCCCCCCCCccCCcEEEEecCCCCCCCChH-HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCCCC-CCchHHhHHH
Q psy4818 639 ---LHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ-GTPLMKSIEE 713 (734)
Q Consensus 639 ---~~~~~~p~~~~~~P~~Li~~g~~D~~v~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~ 713 (734)
-.... .++.| +|+++| .|..+++.. ...+ ... ....++++.++ +||.. .... ..+.
T Consensus 240 ~~~~~~~~----~i~~P-vl~i~g-~D~~~~~~~~~~~~----~~~------~~~~~~~~~v~-g~H~~~~~e~--~~~~ 300 (319)
T 2hfk_A 240 FLAGPRPG----RSSAP-VLLVRA-SEPLGDWQEERGDW----RAH------WDLPHTVADVP-GDHFTMMRDH--APAV 300 (319)
T ss_dssp HHHSCCCC----CCCSC-EEEEEE-SSCSSCCCGGGCCC----SCC------CSSCSEEEEES-SCTTHHHHTC--HHHH
T ss_pred HHHhCCCC----CcCCC-EEEEEc-CCCCCCccccccch----hhc------CCCCCEEEEeC-CCcHHHHHHh--HHHH
Confidence 01112 26777 999999 899888765 2221 111 12345777888 59974 2121 2355
Q ss_pred HHHHHHHHHHHcC
Q psy4818 714 MTDIYVFLMKSLG 726 (734)
Q Consensus 714 ~~~~~~fl~~~l~ 726 (734)
...+.+||.+...
T Consensus 301 ~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 301 AEAVLSWLDAIEG 313 (319)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCC
Confidence 5667888877543
No 430
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.23 E-value=0.00026 Score=71.53 Aligned_cols=245 Identities=9% Similarity=0.033 Sum_probs=126.4
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEE
Q psy4818 94 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 173 (734)
Q Consensus 94 ~~p~~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~ 173 (734)
+++.++|+.+|++-... ..|++.+..++ .+.+..+. ....+++++|||+.++ ..... ..|+++
T Consensus 33 ~~~d~~g~~l~~~~~~~----~~i~~~~~~~~-~~~~~~~~-------~~~~~l~~~~dg~l~v--~~~~~---~~i~~~ 95 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQ----NRTWAWSDDGQ-LSPEMHPS-------HHQNGHCLNKQGHLIA--CSHGL---RRLERQ 95 (296)
T ss_dssp EEEEGGGTEEEEEEGGG----TEEEEEETTSC-EEEEESSC-------SSEEEEEECTTCCEEE--EETTT---TEEEEE
T ss_pred CeEeCCCCEEEEEeCCC----CEEEEEECCCC-eEEEECCC-------CCcceeeECCCCcEEE--EecCC---CeEEEE
Confidence 34446677777776443 24777776555 45444322 1256899999999543 22221 369999
Q ss_pred ECCCCCcccccc--cc---cccCeeEEEcCCcEEEEEEEe-cCCCCCCCC-cccccCCcEEEEEECCCCCCCCeeEEecC
Q psy4818 174 DVDTGKDYPEVL--KN---VKFPSISWTHDHKGFFYNQYC-DINGTADGT-ETTAHMGQKIYYHVLGTEQDKDIPVVEFP 246 (734)
Q Consensus 174 dl~~g~~~~~~~--~~---~~~~~~~wSpDg~~l~y~~~~-~~~~~~~~~-~~~~~~~~~l~~~~l~t~~~~~~~v~~~~ 246 (734)
|.++|+...... .. .....++++|||+ |+++... .......+. .........||+++.+ +. ...+..
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~-- 169 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIR-- 169 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEEC--
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeec--
Confidence 998887432211 11 1235689999996 5554210 000000000 0000112478888765 21 112222
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccc---eEEEEEecCCeEEEEeCC
Q psy4818 247 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH---HHEIIANNGPELIVKTTK 323 (734)
Q Consensus 247 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~ 323 (734)
......+++|||||+.| +... ....|+++++.. . ..+. .-..++ .... ..-.++++|. ||+.+
T Consensus 170 -~~~~~~gi~~s~dg~~l-v~~~---~~~~i~~~~~~~-~-g~~~---~~~~~~-~~~~~~p~~i~~d~~G~-l~v~~-- 235 (296)
T 3e5z_A 170 -DRVKPNGLAFLPSGNLL-VSDT---GDNATHRYCLNA-R-GETE---YQGVHF-TVEPGKTDGLRVDAGGL-IWASA-- 235 (296)
T ss_dssp -CCSSEEEEEECTTSCEE-EEET---TTTEEEEEEECS-S-SCEE---EEEEEE-CCSSSCCCSEEEBTTSC-EEEEE--
T ss_pred -CCCCCccEEECCCCCEE-EEeC---CCCeEEEEEECC-C-CcCc---CCCeEe-eCCCCCCCeEEECCCCC-EEEEc--
Confidence 12244678999999998 5432 236899999863 1 1110 001122 1111 1123778876 66655
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEE-e-eCCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-V-ANNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
...|++++.++.. ...+..... +..+.+ . +++.|++.. .+ .|+.+++++.+.
T Consensus 236 ---~~~v~~~~~~g~~----~~~~~~~~~--~~~~~f~~~d~~~L~v~t-~~---~l~~~~~~~~~~ 289 (296)
T 3e5z_A 236 ---GDGVHVLTPDGDE----LGRVLTPQT--TSNLCFGGPEGRTLYMTV-ST---EFWSIETNVRGL 289 (296)
T ss_dssp ---TTEEEEECTTSCE----EEEEECSSC--CCEEEEESTTSCEEEEEE-TT---EEEEEECSCCBC
T ss_pred ---CCeEEEECCCCCE----EEEEECCCC--ceeEEEECCCCCEEEEEc-CC---eEEEEEcccccc
Confidence 2469999987432 223332212 333434 2 324566554 33 599999865543
No 431
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.21 E-value=0.0015 Score=64.82 Aligned_cols=227 Identities=8% Similarity=0.056 Sum_probs=128.3
Q ss_pred CcEEEEEEeCCCCceEEEEEEECCCCCcccc------cccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcE
Q psy4818 153 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE------VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 226 (734)
Q Consensus 153 G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~------~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 226 (734)
|.+|.|+.. ..|+.+++.++..... ........+++|+|+++.||++... ..+
T Consensus 1 ~~~l~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~---------------~~~ 59 (267)
T 1npe_A 1 GTHLLFAQT------GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS---------------EPS 59 (267)
T ss_dssp CEEEEEEEE------EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT---------------TTE
T ss_pred CcEEEEEcC------CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC---------------CCE
Confidence 567777652 4799999887653211 0111123589999999888887531 247
Q ss_pred EEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccc
Q psy4818 227 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDH 305 (734)
Q Consensus 227 l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~ 305 (734)
|+++++.+... ..+.... ...-.+++++|+++.|++... ....|+++++++. . ...+.. +...
T Consensus 60 I~~~~~~g~~~--~~~~~~~--~~~p~~ia~d~~~~~lyv~d~---~~~~I~~~~~~g~-~--------~~~~~~~~~~~ 123 (267)
T 1npe_A 60 IGRASLHGGEP--TTIIRQD--LGSPEGIALDHLGRTIFWTDS---QLDRIEVAKMDGT-Q--------RRVLFDTGLVN 123 (267)
T ss_dssp EEEEESSSCCC--EEEECTT--CCCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC-S--------CEEEECSSCSS
T ss_pred EEEEecCCCCc--EEEEECC--CCCccEEEEEecCCeEEEEEC---CCCEEEEEEcCCC-C--------EEEEEECCCCC
Confidence 89998876532 2222211 123457899999998887643 2368999998762 1 122221 1111
Q ss_pred eEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCEEEEEEEeCCceeEEEEEC
Q psy4818 306 HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 306 ~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~dl 383 (734)
-.. .++++++.||+.... ....+|+++++++.. .+.+.... -....++.+.. ++.+|++... ...|+++++
T Consensus 124 P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~---~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~--~~~I~~~~~ 196 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTN---RRILAQDN-LGLPNGLTFDAFSSQLCWVDAG--THRAECLNP 196 (267)
T ss_dssp EEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCC---CEEEECTT-CSCEEEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred ccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCC---cEEEEECC-CCCCcEEEEcCCCCEEEEEECC--CCEEEEEec
Confidence 122 388888888876532 224579999987643 23333222 22334555543 4677776533 368999999
Q ss_pred CCCceeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 384 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 384 ~~g~~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. |...+.+........+++ .+++.++++-.. ...++++|.
T Consensus 197 ~-g~~~~~~~~~~~~P~gi~--~d~~~lyva~~~---~~~v~~~d~ 236 (267)
T 1npe_A 197 A-QPGRRKVLEGLQYPFAVT--SYGKNLYYTDWK---TNSVIAMDL 236 (267)
T ss_dssp T-EEEEEEEEECCCSEEEEE--EETTEEEEEETT---TTEEEEEET
T ss_pred C-CCceEEEecCCCCceEEE--EeCCEEEEEECC---CCeEEEEeC
Confidence 4 443232211111122333 345667664332 247888888
No 432
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.21 E-value=5.3e-06 Score=85.75 Aligned_cols=102 Identities=15% Similarity=0.068 Sum_probs=67.7
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHH-HHHHHHcCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKY 564 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~ 564 (734)
+..|.|+++||+.+... .|.. +...|. .++.|+.+|.+|.+. ... ...+++++.+. ++.+.+..
T Consensus 99 g~~~~l~~lhg~~~~~~--~~~~-l~~~L~-~~~~v~~~d~~g~~~---~~~-------~~~~~~~~a~~~~~~i~~~~- 163 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAW--QFSV-LSRYLD-PQWSIIGIQSPRPNG---PMQ-------TAANLDEVCEAHLATLLEQQ- 163 (329)
T ss_dssp CSSCEEEEECCTTSCCG--GGGG-GGGTSC-TTCEEEEECCCTTTS---HHH-------HCSSHHHHHHHHHHHHHHHC-
T ss_pred CCCCcEEEEeCCcccch--HHHH-HHHhcC-CCCeEEEeeCCCCCC---CCC-------CCCCHHHHHHHHHHHHHHhC-
Confidence 44678999999766543 3433 234454 489999999998432 211 11245555443 33443321
Q ss_pred CCCCcEEEEEcChHHHHHHHHHhc---CCCceeEEEEcCCcc
Q psy4818 565 TKPKYITIMGGSNGGLLVGACLNQ---RPELYGAALILVGAL 603 (734)
Q Consensus 565 ~d~~ri~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~~~ 603 (734)
..+++.++|||+||.++..++.+ +|+..+.+|+..+..
T Consensus 164 -~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~ 204 (329)
T 3tej_A 164 -PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWP 204 (329)
T ss_dssp -SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred -CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCC
Confidence 22479999999999999999988 899998888776544
No 433
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.20 E-value=4.5e-05 Score=83.95 Aligned_cols=220 Identities=7% Similarity=0.018 Sum_probs=122.5
Q ss_pred EeeEEeCCC------CcEEEEEEeCCCCceEEEEEEECCCCCcc------------cccccccccCeeEEEcCCcEEEEE
Q psy4818 144 LKLYAFSDN------GKHFAYCLSKSGSDWNTLHIKDVDTGKDY------------PEVLKNVKFPSISWTHDHKGFFYN 205 (734)
Q Consensus 144 ~~~~~~SPD------G~~la~~~~~~g~~~~~l~v~dl~~g~~~------------~~~~~~~~~~~~~wSpDg~~l~y~ 205 (734)
+..++|||+ |++||-+.. . .+|++||+.+++.. ...........++|+|++ .|+..
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~-D----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasg 283 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQ-E----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCG 283 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEET-T----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEE
T ss_pred EEEEEECCCCCCCCCCceEEEEec-C----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEE
Confidence 678999997 567775543 2 36999999877522 001111234678999875 56555
Q ss_pred EEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEE--EEecCC-cEEEEEEecCCCCceEEEEeC
Q psy4818 206 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS--EVTDCG-RYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~--~~SpDG-~~l~~~~~~~~~~~~i~~~d~ 282 (734)
..+ ..|.+|++.++... ...+.. +...+.++ .|+||| +.|+ +.+. ...|.+||+
T Consensus 284 s~D----------------gtV~lWD~~~~~~~-~~~~~~--H~~~V~sv~~~~s~~g~~~la-S~S~---D~tvklWD~ 340 (524)
T 2j04_B 284 FKN----------------GFVAEFDLTDPEVP-SFYDQV--HDSYILSVSTAYSDFEDTVVS-TVAV---DGYFYIFNP 340 (524)
T ss_dssp ETT----------------SEEEEEETTBCSSC-SEEEEC--SSSCEEEEEEECCTTSCCEEE-EEET---TSEEEEECG
T ss_pred eCC----------------CEEEEEECCCCCCc-eEEeec--ccccEEEEEEEcCCCCCeEEE-Eecc---CCeEEEEEC
Confidence 433 27999999865321 222333 22345566 678998 5554 4332 268999998
Q ss_pred CCCCCCcccCCCCceeeecccc--ceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEE
Q psy4818 283 HSLPDGKISGKFPLKTVIPGMD--HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 359 (734)
Q Consensus 283 ~~~~~~~l~~~~~~~~l~~~~~--~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 359 (734)
.++. ....+..... .... .|+|+++.++..+. ...|.++|+.++.. ...+..+. ..+..+.
T Consensus 341 ~~~~--------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~----d~tv~lwd~~~~~~--~~~l~gH~--~~V~sva 404 (524)
T 2j04_B 341 KDIA--------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG----ASSLRAVPSRAAFA--VHPLVSRE--TTITAIG 404 (524)
T ss_dssp GGHH--------HHCEEEEECSCCSCCCEEEETTTTEEEEECS----SSEEEEEETTCTTC--CEEEEECS--SCEEEEE
T ss_pred CCCC--------cccccccccccCcccceEeCCCcCeEEEeCC----CCcEEEEECccccc--ceeeecCC--CceEEEE
Confidence 7621 1112221111 1122 39999887553322 23588899876541 24444433 3445555
Q ss_pred EeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-----CceEEeeccCcccceE
Q psy4818 360 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-----LGQITHISGRRKYNEV 411 (734)
Q Consensus 360 ~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-----~g~v~~~~~~~d~~~l 411 (734)
+..++.++++...++ .+.+||+. ++.+..+... ...+..+.++++++.+
T Consensus 405 ~Sp~g~~l~Sgs~Dg--tv~lwd~~-~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 405 VSRLHPMVLAGSADG--SLIITNAA-RRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp CCSSCCBCEEEETTT--EEECCBSC-SSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred eCCCCCeEEEEECCC--EEEEEech-HhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 555466677777664 68888874 3222211100 1124466777777633
No 434
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.19 E-value=0.00047 Score=71.42 Aligned_cols=115 Identities=9% Similarity=0.031 Sum_probs=70.4
Q ss_pred cCeeEEEcC---CcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEE
Q psy4818 190 FPSISWTHD---HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLV 266 (734)
Q Consensus 190 ~~~~~wSpD---g~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~ 266 (734)
+..++|+|| |+.|+....+. .|.+|++.+........+.. +...+..+.|+|||++|+.
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg----------------~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWAN----------------DVRCWEVQDSGQTIPKAQQM--HTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTS----------------EEEEEEECTTSCEEEEEEEE--CSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEcCCCCCceEEEEECCCC----------------cEEEEEcCCCCceeEEEecc--ccCCEEEEEECcCCCEEEE
Confidence 468999999 57776655332 68888887633221122322 2335678999999999885
Q ss_pred EEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEE-E--EecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 267 STSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-I--ANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 267 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~--s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
... ...|.+||+.++ ....+.......... | +++++.|+..+. +..|..+|+.++.
T Consensus 104 ~~~----dg~v~iwd~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 104 ASC----DKTAKMWDLSSN---------QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW----DKTLKFWDTRSSN 162 (368)
T ss_dssp EET----TSEEEEEETTTT---------EEEEEEECSSCEEEEEEEECSSCEEEEEEET----TSEEEEECSSCSS
T ss_pred EcC----CCcEEEEEcCCC---------CceeeccccCceEEEEEEeCCCCCEEEEccC----CCcEEEEECCCCc
Confidence 432 258999999872 122233333333333 6 677665655443 3468888887654
No 435
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.17 E-value=0.0052 Score=65.82 Aligned_cols=226 Identities=12% Similarity=0.080 Sum_probs=128.4
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
..+..+.|+ ++.|+.... + ..|++||+.+++.+..... ......+.| +++.|+....+
T Consensus 160 ~~v~~~~~~--~~~l~s~~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~d------------ 218 (445)
T 2ovr_B 160 GGVWSSQMR--DNIIISGST-D----RTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRD------------ 218 (445)
T ss_dssp SCEEEEEEE--TTEEEEEET-T----SCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETT------------
T ss_pred CCEEEEEec--CCEEEEEeC-C----CeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeCC------------
Confidence 346677776 556665432 3 3699999999875432221 112345666 45666665533
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
..|.++++.++.. +..+.. +......+.+ ||++|+.... ...|.+||+.++ .....+.
T Consensus 219 ----g~i~~wd~~~~~~--~~~~~~--~~~~v~~~~~--~~~~l~~~~~----dg~i~iwd~~~~--------~~~~~~~ 276 (445)
T 2ovr_B 219 ----ATLRVWDIETGQC--LHVLMG--HVAAVRCVQY--DGRRVVSGAY----DFMVKVWDPETE--------TCLHTLQ 276 (445)
T ss_dssp ----SEEEEEESSSCCE--EEEEEC--CSSCEEEEEE--CSSCEEEEET----TSCEEEEEGGGT--------EEEEEEC
T ss_pred ----CEEEEEECCCCcE--EEEEcC--CcccEEEEEE--CCCEEEEEcC----CCEEEEEECCCC--------cEeEEec
Confidence 2788999877542 222322 2223445555 8888775432 257899998772 1122222
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
........+..+++.++..+.. ..|..+|+.++. ....+... ...+..+.+ +++ .+++...+ ..|.+
T Consensus 277 -~~~~~v~~~~~~~~~l~~~~~d----~~i~i~d~~~~~---~~~~~~~~-~~~v~~~~~-~~~-~l~~~~~d--g~i~v 343 (445)
T 2ovr_B 277 -GHTNRVYSLQFDGIHVVSGSLD----TSIRVWDVETGN---CIHTLTGH-QSLTSGMEL-KDN-ILVSGNAD--STVKI 343 (445)
T ss_dssp -CCSSCEEEEEECSSEEEEEETT----SCEEEEETTTCC---EEEEECCC-CSCEEEEEE-ETT-EEEEEETT--SCEEE
T ss_pred -CCCCceEEEEECCCEEEEEeCC----CeEEEEECCCCC---EEEEEcCC-cccEEEEEE-eCC-EEEEEeCC--CeEEE
Confidence 2222222344477777655542 459999998765 22222222 233444444 434 45555555 47999
Q ss_pred EECCCCceeeeeCC---CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHSFPL---DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~l~~---~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
||+.+++.+..+.. ..+.+..+.++ ++ ++++.+.. ..+..||+
T Consensus 344 wd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~d---g~v~iwd~ 389 (445)
T 2ovr_B 344 WDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN-FVITSSDD---GTVKLWDL 389 (445)
T ss_dssp EETTTCCEEEEECSTTSCSSCEEEEEEC--SS-EEEEEETT---SEEEEEET
T ss_pred EECCCCcEEEEEccCCCCCCCEEEEEEC--CC-EEEEEeCC---CeEEEEEC
Confidence 99988988777765 34556666654 33 44444432 47999999
No 436
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.16 E-value=0.002 Score=68.93 Aligned_cols=227 Identities=10% Similarity=0.128 Sum_probs=126.1
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
.+..++| ||++|+.... + ..|++||+.+++.+..... ......+.|+ ++.|+....+
T Consensus 175 ~v~~l~~--~~~~l~sg~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~d------------- 232 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSS-D----STVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKD------------- 232 (435)
T ss_dssp CEEEEEC--CSSEEEEEET-T----SCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETT-------------
T ss_pred cEEEEEE--CCCEEEEEcC-C----CeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCC-------------
Confidence 3555666 8888876543 2 3699999999986432221 1223566775 4455554432
Q ss_pred cCCcEEEEEECCCCCCCCe-eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 222 HMGQKIYYHVLGTEQDKDI-PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~-~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
..|.++++.++..... ..+. .+...+..+.+ ||++|+.... ...|.+||+.++. ....+.
T Consensus 233 ---g~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~s~~~----dg~i~vwd~~~~~--------~~~~~~ 293 (435)
T 1p22_A 233 ---RSIAVWDMASPTDITLRRVLV--GHRAAVNVVDF--DDKYIVSASG----DRTIKVWNTSTCE--------FVRTLN 293 (435)
T ss_dssp ---SCEEEEECSSSSCCEEEEEEC--CCSSCEEEEEE--ETTEEEEEET----TSEEEEEETTTCC--------EEEEEE
T ss_pred ---CcEEEEeCCCCCCceeeeEec--CCCCcEEEEEe--CCCEEEEEeC----CCeEEEEECCcCc--------EEEEEc
Confidence 2688888877643211 1222 22334445555 8888875432 2689999998731 122222
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
........+..+++.++..+. +..|..+|+.++. ....+... ...+..+.+ + +..+++...+ ..|.+
T Consensus 294 -~~~~~v~~~~~~~~~l~~g~~----dg~i~iwd~~~~~---~~~~~~~h-~~~v~~~~~-~-~~~l~sg~~d--g~i~v 360 (435)
T 1p22_A 294 -GHKRGIACLQYRDRLVVSGSS----DNTIRLWDIECGA---CLRVLEGH-EELVRCIRF-D-NKRIVSGAYD--GKIKV 360 (435)
T ss_dssp -CCSSCEEEEEEETTEEEEEET----TSCEEEEETTTCC---EEEEECCC-SSCEEEEEC-C-SSEEEEEETT--SCEEE
T ss_pred -CCCCcEEEEEeCCCEEEEEeC----CCeEEEEECCCCC---EEEEEeCC-cCcEEEEEe-c-CCEEEEEeCC--CcEEE
Confidence 222223334556776665443 3459999998765 22233322 334455544 4 4555566555 47899
Q ss_pred EECCCCc---------eeeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGK---------RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~---------~~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
||+.+++ .+..+....+.+..+.+ ++..+ ++.+. -..+..+|+
T Consensus 361 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l-~s~s~---Dg~i~iwd~ 412 (435)
T 1p22_A 361 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQI-VSSSH---DDTILIWDF 412 (435)
T ss_dssp EEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCE-EECCS---SSEEEEEC-
T ss_pred EECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEE-EEEeC---CCEEEEEEC
Confidence 9986554 44555555555655555 44443 33332 247889998
No 437
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.16 E-value=0.00059 Score=70.99 Aligned_cols=203 Identities=9% Similarity=0.065 Sum_probs=114.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
+....++++++.++++.... ..|.+||+.+|+.+...........+.|+++. ++... +.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~-~~-------------- 119 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSY-GD-------------- 119 (355)
T ss_dssp CCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEE-TT--------------
T ss_pred eEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEE-cC--------------
Confidence 45688999999998765332 38999999999865432222234567787764 43332 21
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCC-------CC-
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK-------FP- 295 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~-------~~- 295 (734)
.|+++++.+.... +..+.. + .....+++ +++++.+. .....|.+||+.++........ .+
T Consensus 120 --~i~i~d~~~~~~~-~~~~~~---~--~~~~~~s~--~~la~~sg--~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~ 187 (355)
T 3vu4_A 120 --VISVFKFGNPWKR-ITDDIR---F--GGVCEFSN--GLLVYSNE--FNLGQIHITKLQSSGSATTQDQGVQQKAILGK 187 (355)
T ss_dssp --EEEEEESSTTCCB-SSCCEE---E--EEEEEEET--TEEEEEES--SCTTCEEEEECCC------------------C
T ss_pred --EEEEEECCCCcee-eEEecc---C--CceEEEEc--cEEEEeCC--CcCcEEEEEECCCCCccccccccccccccCcc
Confidence 6889998876211 111111 1 12356677 77776522 2235799999987320000000 01
Q ss_pred ceeeeccccceEEE-EEecCCeEEEEeCCCCCCce-EEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeC
Q psy4818 296 LKTVIPGMDHHHEI-IANNGPELIVKTTKNAPKGK-VVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 373 (734)
Q Consensus 296 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~-l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 373 (734)
...+..+....... |+|||+.|+-.+. +.. |..||+.++.. ...+..+.....+..+.+..++.++++...+
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~----d~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQ----DGTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEET----TCSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEETT
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeC----CCCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEECC
Confidence 22233333333343 9999987775444 345 88899987651 2333312123455666666556777777666
Q ss_pred CceeEEEEECCCCc
Q psy4818 374 VRSVMDLHDLNTGK 387 (734)
Q Consensus 374 ~~~~l~~~dl~~g~ 387 (734)
..+.+||+.++.
T Consensus 262 --~~v~iw~~~~~~ 273 (355)
T 3vu4_A 262 --WTLHVFEIFNDQ 273 (355)
T ss_dssp --CEEEEEESSCCS
T ss_pred --CEEEEEEccCCC
Confidence 478999986553
No 438
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.15 E-value=0.00043 Score=68.07 Aligned_cols=196 Identities=11% Similarity=0.103 Sum_probs=118.0
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
.++.|+||| .||.+... .....|..+++.++.... ....+... +. ..++.+|+.|+....
T Consensus 24 ~Gl~~~~dg-~Lyvstg~-------------~~~s~v~~iD~~tg~v~~--~i~l~~~~-fg--eGi~~~g~~lyv~t~- 83 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGL-------------YGRSSVRQVALQTGKVEN--IHKMDDSY-FG--EGLTLLNEKLYQVVW- 83 (266)
T ss_dssp EEEEECSTT-EEEEEECS-------------TTTCEEEEEETTTCCEEE--EEECCTTC-CE--EEEEEETTEEEEEET-
T ss_pred ccEEEeCCC-eEEEECCC-------------CCCCEEEEEECCCCCEEE--EEecCCCc-ce--EEEEEeCCEEEEEEe-
Confidence 578999995 55554421 123479999998875321 11222222 33 345556788776543
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 350 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 350 (734)
..+.++++|.+++. ....+..+...++. +++||+++|+ ++ + ..+|+.+|.++.+. ...+.-..
T Consensus 84 --~~~~v~viD~~t~~--------v~~~i~~g~~~g~g-lt~Dg~~l~v-s~--g-s~~l~viD~~t~~v--~~~I~Vg~ 146 (266)
T 2iwa_A 84 --LKNIGFIYDRRTLS--------NIKNFTHQMKDGWG-LATDGKILYG-SD--G-TSILYEIDPHTFKL--IKKHNVKY 146 (266)
T ss_dssp --TCSEEEEEETTTTE--------EEEEEECCSSSCCE-EEECSSSEEE-EC--S-SSEEEEECTTTCCE--EEEEECEE
T ss_pred --cCCEEEEEECCCCc--------EEEEEECCCCCeEE-EEECCCEEEE-EC--C-CCeEEEEECCCCcE--EEEEEECC
Confidence 23689999998821 11222112122222 7889998885 55 2 35799999987541 12222111
Q ss_pred CCc---eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-C------------ceEEeeccCcccceEEEE
Q psy4818 351 ENR---TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-L------------GQITHISGRRKYNEVFYG 414 (734)
Q Consensus 351 ~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~------------g~v~~~~~~~d~~~l~~~ 414 (734)
... .+..+.+.+ +.+|+... ....|.++|+++|+.+..|..+ . ....++.+++++++++++
T Consensus 147 ~~~p~~~~nele~~d-g~lyvn~~--~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 147 NGHRVIRLNELEYIN-GEVWANIW--QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp TTEECCCEEEEEEET-TEEEEEET--TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred CCcccccceeEEEEC-CEEEEecC--CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 111 233444554 67775542 2368999999999988887653 0 234678888999999988
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
...+ +.+|.+++
T Consensus 224 gk~~---~~v~~i~l 235 (266)
T 2iwa_A 224 GKLW---PKLFEIKL 235 (266)
T ss_dssp ETTC---SEEEEEEE
T ss_pred CCCC---CeEEEEEE
Confidence 7655 47999988
No 439
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.13 E-value=0.0041 Score=63.36 Aligned_cols=218 Identities=11% Similarity=0.096 Sum_probs=125.3
Q ss_pred EEEEEEECCCCCc-cccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 168 NTLHIKDVDTGKD-YPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 168 ~~l~v~dl~~g~~-~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
..|+.+|++++.. ......+. ...++.|.+.+..||++... ..+|++.++.+......++...
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~---------------~~~I~r~~~~g~~~~~~~~~~~ 77 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS---------------EEAIKRTEFNKTESVQNVVVSG 77 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT---------------TTEEEEEETTSSSCCCEEEEEC
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC---------------CCcEEEEEccCCCceEEEEcCC
Confidence 6799999987641 11111111 23578999988888887532 2479999887664322333332
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-ccccceEE-EEEecCCeEEEEeCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDHHHE-IIANNGPELIVKTTK 323 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~-~~~~~~~~-~~s~dg~~l~~~s~~ 323 (734)
...+ .++++.+.++.|+++.. ....|.++++++. ....+. .....-.. .+.|.+..||+.-..
T Consensus 78 l~~p---~glavd~~~g~ly~~d~---~~~~I~~~~~dG~---------~~~~l~~~~~~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 78 LLSP---DGLACDWLGEKLYWTDS---ETNRIEVSNLDGS---------LRKVLFWQELDQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSC---------SCEEEECSSCSSEEEEEEEGGGTEEEEEECS
T ss_pred CCCc---cEEEEEcCCCeEEEEEC---CCCEEEEEECCCC---------cEEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence 2222 36788888888887643 2368999999872 112232 22221222 377877888876432
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-CCceEEe
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITH 401 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~-~~g~v~~ 401 (734)
...+|+++++++.. .+.++... -....++.+. +++.||++-. ....|+++++ +|...+.+.. ..+...+
T Consensus 143 --~~~~I~r~~~dG~~---~~~~~~~~-l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~-dG~~~~~~~~~~~~~P~g 213 (318)
T 3sov_A 143 --EVPKIERAGMDGSS---RFIIINSE-IYWPNGLTLDYEEQKLYWADA--KLNFIHKSNL-DGTNRQAVVKGSLPHPFA 213 (318)
T ss_dssp --SSCEEEEEETTSCS---CEEEECSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEET-TSCSCEEEECSCCSCEEE
T ss_pred --CCCEEEEEEcCCCC---eEEEEECC-CCCccEEEEeccCCEEEEEEC--CCCEEEEEcC-CCCceEEEecCCCCCceE
Confidence 34679999998654 24444332 2233455555 3578887643 3468999999 5654344322 2222233
Q ss_pred eccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 402 ISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 402 ~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++. +++.++++- . .-..++++|.
T Consensus 214 lav--~~~~lywtd--~-~~~~V~~~~~ 236 (318)
T 3sov_A 214 LTL--FEDILYWTD--W-STHSILACNK 236 (318)
T ss_dssp EEE--ETTEEEEEE--T-TTTEEEEEET
T ss_pred EEE--eCCEEEEEe--c-CCCeEEEEEC
Confidence 443 344566552 2 2347888887
No 440
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.12 E-value=0.0045 Score=63.11 Aligned_cols=226 Identities=8% Similarity=0.028 Sum_probs=128.8
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC----CCcccccccc-cccC
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----GKDYPEVLKN-VKFP 191 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~----g~~~~~~~~~-~~~~ 191 (734)
|.+.+..+.....++.. + ....++.|++++++|.|+-... ..|+.+++.+ .......... ....
T Consensus 12 I~~i~~~~~~~~~~~~~--~-----~~p~g~~~d~~~~~ly~~D~~~----~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPN--L-----RNVVALDTEVASNRIYWSDLSQ----RMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEETTSCCCEEEECS--C-----SSEEEEEEETTTTEEEEEETTT----TEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECCCcceEehhcC--C-----CceEEEEEEeCCCEEEEEECCC----CcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 56666544444444331 1 1256899999998887765432 3699999886 2211111111 1236
Q ss_pred eeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecC
Q psy4818 192 SISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN 271 (734)
Q Consensus 192 ~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 271 (734)
++++.+.++.||++... ..+|.+.++++.. ...+.... ...-.+++.+|++++|+++...
T Consensus 81 glavd~~~~~ly~~d~~---------------~~~I~~~~~~g~~--~~~~~~~~--~~~P~~iavdp~~g~ly~~d~~- 140 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSV---------------LGTVSVADTKGVK--RKTLFREN--GSKPRAIVVDPVHGFMYWTDWG- 140 (316)
T ss_dssp EEEEETTTTEEEEEETT---------------TTEEEEEETTSSS--EEEEEECT--TCCEEEEEEETTTTEEEEEECS-
T ss_pred EEEEeecCCeEEEEECC---------------CCEEEEEeCCCCc--eEEEEECC--CCCcceEEeCCCCCEEEEEccC-
Confidence 78888888888876421 2378888876542 12233221 1133578999999988876432
Q ss_pred CCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC
Q psy4818 272 TQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 349 (734)
Q Consensus 272 ~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 349 (734)
....|+++++++ .. ...+.. ....-.. .+++++++||+.-. ...+|+++++++.. .+.+...
T Consensus 141 -~~~~I~~~~~dG-~~--------~~~~~~~~~~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~~---~~~~~~~ 204 (316)
T 1ijq_A 141 -TPAKIKKGGLNG-VD--------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILED 204 (316)
T ss_dssp -SSCEEEEEETTS-CC--------EEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEEEC
T ss_pred -CCCeEEEEcCCC-CC--------eEEEEECCCCCceEEEEeccCCEEEEEEC---CCCeEEEEecCCCc---eEEEeec
Confidence 226899999876 21 122222 1111112 38888999998643 24679999998654 2444432
Q ss_pred C-CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 350 D-ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 350 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
. ......++.+. ++.+|++.. +..+|.+++..+|+.++.+
T Consensus 205 ~~~~~~P~giav~-~~~ly~~d~--~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 205 EKRLAHPFSLAVF-EDKVFWTDI--INEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TTTTSSEEEEEEE-TTEEEEEET--TTTEEEEEETTTCCCCEEE
T ss_pred CCccCCcEEEEEE-CCEEEEEEC--CCCeEEEEeCCCCcceEEE
Confidence 1 11222345454 478887653 3468999998778754444
No 441
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.09 E-value=5.4e-05 Score=80.23 Aligned_cols=212 Identities=9% Similarity=-0.081 Sum_probs=107.2
Q ss_pred CCcEEEeeEEeCC--------CCcEEEEEEeCCCCceEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEec
Q psy4818 139 DGTTALKLYAFSD--------NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCD 209 (734)
Q Consensus 139 ~~~~~~~~~~~SP--------DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~ 209 (734)
++...+..++||| ||++||-..+ ..+|++||+.++..+... ........++|+|++..++.+...+
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~-----D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGD-----DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEET-----TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEEC-----CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 4455688999998 9999985543 358999999877643322 2222335789999997666555422
Q ss_pred CCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEe---------------------cCCCCeeEEEEEEe-cCCcEEEEE
Q psy4818 210 INGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE---------------------FPNGRSLGLHSEVT-DCGRYLLVS 267 (734)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~---------------------~~~~~~~~~~~~~S-pDG~~l~~~ 267 (734)
..|.+|++.+++........ ..........+.|+ |||+.|+-.
T Consensus 209 ---------------~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~ 273 (393)
T 4gq1_A 209 ---------------GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM 273 (393)
T ss_dssp ---------------SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE
T ss_pred ---------------CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE
Confidence 26788887765432111000 00011122345665 899998743
Q ss_pred EecCCCCceEEEEeCCCCCCCc-ccCCC----------CceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGK-ISGKF----------PLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~-l~~~~----------~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
. ....+.+||+.++.... +.... ...............+.+..+.+++.+. +.+..|.++|+.
T Consensus 274 s----~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg--s~Dg~V~lwd~~ 347 (393)
T 4gq1_A 274 C----KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH--SQHGLIQLINTY 347 (393)
T ss_dssp C----TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE--TTTTEEEEEETT
T ss_pred e----CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE--CCCCEEEEEECC
Confidence 2 23678899987633211 10000 0000000000000124443333443332 224579999998
Q ss_pred CCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 337 NPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
++.. ...+..+. ..+..+.+..+++.++....++ +.++.+
T Consensus 348 ~~~~--~~~~~~~~--~~V~svafspdG~~LA~as~~G---v~lvrL 387 (393)
T 4gq1_A 348 EKDS--NSIPIQLG--MPIVDFCWHQDGSHLAIATEGS---VLLTRL 387 (393)
T ss_dssp CTTC--CEEEEECS--SCEEEEEECTTSSEEEEEESSE---EEEEEE
T ss_pred CCcE--EEEecCCC--CcEEEEEEcCCCCEEEEEeCCC---eEEEEE
Confidence 7652 23344333 3456666655566666666654 444444
No 442
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.08 E-value=0.0032 Score=63.84 Aligned_cols=236 Identities=9% Similarity=0.023 Sum_probs=119.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..+++|+|||+ | |.++..+ ..|+.+|.+++........ ....++++++||+ |+++.... .
T Consensus 34 pegia~~~~g~-l-yv~d~~~---~~I~~~d~~g~~~~~~~~~-~~p~gia~~~dG~-l~vad~~~-------------~ 93 (306)
T 2p4o_A 34 LENLASAPDGT-I-FVTNHEV---GEIVSITPDGNQQIHATVE-GKVSGLAFTSNGD-LVATGWNA-------------D 93 (306)
T ss_dssp EEEEEECTTSC-E-EEEETTT---TEEEEECTTCCEEEEEECS-SEEEEEEECTTSC-EEEEEECT-------------T
T ss_pred cceEEECCCCC-E-EEEeCCC---CeEEEECCCCceEEEEeCC-CCceeEEEcCCCc-EEEEeccC-------------C
Confidence 46789999998 4 4444332 3589999876532211112 2336789999998 55443211 1
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCccc---CCCCceeee
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS---GKFPLKTVI 300 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~---~~~~~~~l~ 300 (734)
..+|++++..++.. ..+...+. ..+..++...+++ .+++.. . ....||.+|..++.. .+. .........
T Consensus 94 ~~~v~~~d~~~g~~--~~~~~~~~-~~~~~g~~~~~~~-~~~v~d-~--~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~ 165 (306)
T 2p4o_A 94 SIPVVSLVKSDGTV--ETLLTLPD-AIFLNGITPLSDT-QYLTAD-S--YRGAIWLIDVVQPSG-SIWLEHPMLARSNSE 165 (306)
T ss_dssp SCEEEEEECTTSCE--EEEEECTT-CSCEEEEEESSSS-EEEEEE-T--TTTEEEEEETTTTEE-EEEEECGGGSCSSTT
T ss_pred cceEEEEcCCCCeE--EEEEeCCC-ccccCcccccCCC-cEEEEE-C--CCCeEEEEeCCCCcE-eEEEECCcccccccc
Confidence 12577766555432 22333222 2233445555554 444332 1 225899999875210 000 000000000
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCC-CCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 301 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN-PCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 301 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
........ +++||+.||+.... ..+|+++++++ +.....+.+.... ....+.+..++.+|++.. +...|.
T Consensus 166 ~~~~~png-is~dg~~lyv~d~~---~~~I~~~~~~~~g~~~~~~~~~~~~---~P~gi~vd~dG~l~va~~--~~~~V~ 236 (306)
T 2p4o_A 166 SVFPAANG-LKRFGNFLYVSNTE---KMLLLRIPVDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATH--IYNSVV 236 (306)
T ss_dssp CCSCSEEE-EEEETTEEEEEETT---TTEEEEEEBCTTSCBCCCEEEEESC---CCSSEEEBTTCCEEEECB--TTCCEE
T ss_pred CCCCcCCC-cCcCCCEEEEEeCC---CCEEEEEEeCCCCCCCccEEEeccC---CCCCeEECCCCCEEEEeC--CCCeEE
Confidence 11111112 48999888875432 45799999875 3211122222111 112334444466665543 235799
Q ss_pred EEECCCCceee--eeCCCCceEEeeccC---cccceEEEEEec
Q psy4818 380 LHDLNTGKRLH--SFPLDLGQITHISGR---RKYNEVFYGFTS 417 (734)
Q Consensus 380 ~~dl~~g~~~~--~l~~~~g~v~~~~~~---~d~~~l~~~~ss 417 (734)
+++. +|+... .+..+.....++.+. ++++.|+++.+.
T Consensus 237 ~~~~-~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 237 RIAP-DRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECT-TCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EECC-CCCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 9998 576532 333332234456665 677888887654
No 443
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.07 E-value=0.0037 Score=63.69 Aligned_cols=217 Identities=10% Similarity=0.019 Sum_probs=120.0
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC--CCCeeEEecC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVEFP 246 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~--~~~~~v~~~~ 246 (734)
.|+++|+++++............+++|.++++.||++... ..+|++.++.+.. .....+....
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~---------------~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS---------------QRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT---------------TTEEEEEEC--------CEEEECSS
T ss_pred eEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC---------------CCcEEEEECCCCCCCcccEEEEeCC
Confidence 4899999887643322121223689999998889887532 3478988887621 1112233211
Q ss_pred -CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCC
Q psy4818 247 -NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 323 (734)
Q Consensus 247 -~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~ 323 (734)
..+ .++++++.++.|+++.. ....|.++++++. ....++. ....-.. .++|+++.||+....
T Consensus 76 ~~~p---~glavd~~~~~ly~~d~---~~~~I~~~~~~g~---------~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 76 IQAP---DGLAVDWIHSNIYWTDS---VLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CCCc---CEEEEeecCCeEEEEEC---CCCEEEEEeCCCC---------ceEEEEECCCCCcceEEeCCCCCEEEEEccC
Confidence 122 46788888888877543 2368999998761 1222332 1111122 377878888876432
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeC-CC--CceE
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LD--LGQI 399 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~-~~--~g~v 399 (734)
...+|+++++++.. .+.+.... -....++.+. +++.||++-. ....|+++++ +|...+.+. .. ....
T Consensus 141 --~~~~I~~~~~dG~~---~~~~~~~~-~~~P~gla~d~~~~~lY~~D~--~~~~I~~~d~-dg~~~~~~~~~~~~~~~P 211 (316)
T 1ijq_A 141 --TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDV-NGGNRKTILEDEKRLAHP 211 (316)
T ss_dssp --SSCEEEEEETTSCC---EEEEECSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEET-TSCSCEEEEECTTTTSSE
T ss_pred --CCCeEEEEcCCCCC---eEEEEECC-CCCceEEEEeccCCEEEEEEC--CCCeEEEEec-CCCceEEEeecCCccCCc
Confidence 23679999998654 23333332 2334455555 4577887643 3468999999 465434332 11 1222
Q ss_pred EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 400 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+++. +++.++++-. .-.+++++|.
T Consensus 212 ~giav--~~~~ly~~d~---~~~~V~~~~~ 236 (316)
T 1ijq_A 212 FSLAV--FEDKVFWTDI---INEAIFSANR 236 (316)
T ss_dssp EEEEE--ETTEEEEEET---TTTEEEEEET
T ss_pred EEEEE--ECCEEEEEEC---CCCeEEEEeC
Confidence 23443 2345655432 1246777776
No 444
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.06 E-value=0.004 Score=63.46 Aligned_cols=206 Identities=6% Similarity=-0.004 Sum_probs=124.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccc-ccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..++.|.+.++.|.|+-. .+ ..|+.+++.++.... ....+ ....++++.+.+..||++..
T Consensus 37 ~~~ld~d~~~~~lyw~D~-~~---~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~-------------- 98 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDV-SE---EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-------------- 98 (318)
T ss_dssp EEEEEEEGGGTEEEEEET-TT---TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET--------------
T ss_pred cEEEEEEeCCCEEEEEEC-CC---CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC--------------
Confidence 457889998888876543 32 369999998774221 11111 12357888888888887642
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
...+|.+.++++... ..+.... ...-.++++.|++.+|+++... ....|+++++++ .. ...++.
T Consensus 99 -~~~~I~~~~~dG~~~--~~l~~~~--~~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG-~~--------~~~~~~ 162 (318)
T 3sov_A 99 -ETNRIEVSNLDGSLR--KVLFWQE--LDQPRAIALDPSSGFMYWTDWG--EVPKIERAGMDG-SS--------RFIIIN 162 (318)
T ss_dssp -TTTEEEEEETTSCSC--EEEECSS--CSSEEEEEEEGGGTEEEEEECS--SSCEEEEEETTS-CS--------CEEEEC
T ss_pred -CCCEEEEEECCCCcE--EEEEeCC--CCCccEEEEeCCCCEEEEEecC--CCCEEEEEEcCC-CC--------eEEEEE
Confidence 123788888876432 2233211 1133578999998888876432 236899999986 21 122222
Q ss_pred -cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEE
Q psy4818 302 -GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 379 (734)
Q Consensus 302 -~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 379 (734)
+...-.. .+++++++||+.-. ...+|+++++++.. .+.++... .....++.+. ++.+|++. -+...|+
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~~~-~~~P~glav~-~~~lywtd--~~~~~V~ 232 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGTN---RQAVVKGS-LPHPFALTLF-EDILYWTD--WSTHSIL 232 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEECSC-CSCEEEEEEE-TTEEEEEE--TTTTEEE
T ss_pred CCCCCccEEEEeccCCEEEEEEC---CCCEEEEEcCCCCc---eEEEecCC-CCCceEEEEe-CCEEEEEe--cCCCeEE
Confidence 1111122 38888999998643 35679999998754 24444422 2223344444 47888873 3446899
Q ss_pred EEECCCCceeeeeC
Q psy4818 380 LHDLNTGKRLHSFP 393 (734)
Q Consensus 380 ~~dl~~g~~~~~l~ 393 (734)
+++..+|+..+.|.
T Consensus 233 ~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 233 ACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTTCCSCEEEE
T ss_pred EEECCCCCceEEEe
Confidence 99987787655543
No 445
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.05 E-value=0.0038 Score=64.62 Aligned_cols=215 Identities=10% Similarity=0.023 Sum_probs=121.6
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec-CC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF-PN 247 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~-~~ 247 (734)
.|+.+++++..............+++|.++++.||++... ..+|+++++++...+ .+... ..
T Consensus 54 ~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~---------------~~~I~r~~~~g~~~~--~~~~~~~~ 116 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT---------------LDRILRANLNGSNVE--EVVSTGLE 116 (349)
T ss_dssp CEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT---------------TTEEEEEETTSCSCE--EEECSSCS
T ss_pred ceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc---------------CCceEEEecCCCCce--EEEeCCCC
Confidence 4888888776532221111223688999988889887532 237999998765422 22221 11
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCCC
Q psy4818 248 GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNA 325 (734)
Q Consensus 248 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~ 325 (734)
.+ .++++.+.++.|+++.. ....|+++++++. . ...++. +...-.. .++|+++.||+.-...
T Consensus 117 ~p---~glavd~~~g~ly~~d~---~~~~I~~~~~dG~-~--------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~- 180 (349)
T 3v64_C 117 SP---GGLAVDWVHDKLYWTDS---GTSRIEVANLDGA-H--------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGN- 180 (349)
T ss_dssp CC---CEEEEETTTTEEEEEET---TTTEEEEEETTSC-S--------CEEEECTTCSCEEEEEEETTTTEEEEEECSS-
T ss_pred Cc---cEEEEecCCCeEEEEcC---CCCeEEEEcCCCC-c--------eEEEEeCCCCCcceEEEecCcCeEEEeccCC-
Confidence 22 46788888888887643 2368999999872 1 122222 1121122 3778788888764422
Q ss_pred CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeee-CCCCceEEeec
Q psy4818 326 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHIS 403 (734)
Q Consensus 326 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l-~~~~g~v~~~~ 403 (734)
..+|+++++++.. .+.++... -....++.+. +++.||++-. +...|+++++ +|...+.+ ........+++
T Consensus 181 -~~~I~r~~~dG~~---~~~~~~~~-~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~-dG~~~~~~~~~~~~~P~gia 252 (349)
T 3v64_C 181 -TPRIEASSMDGSG---RRIIADTH-LFWPNGLTIDYAGRRMYWVDA--KHHVIERANL-DGSHRKAVISQGLPHPFAIT 252 (349)
T ss_dssp -SCEEEEEETTSCS---CEESCCSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEET-TSCSCEEEECSSCSSEEEEE
T ss_pred -CCEEEEEeCCCCC---cEEEEECC-CCCcceEEEeCCCCEEEEEEC--CCCEEEEEeC-CCCceEEEEeCCCCCceEEE
Confidence 3679999998754 23343332 2334455555 4578887643 3468999998 56543333 22222223344
Q ss_pred cCcccceEEEEEecCCCCceEEEEeC
Q psy4818 404 GRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 404 ~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
. +++.++++-.. -..|+++|.
T Consensus 253 v--~~~~ly~td~~---~~~V~~~~~ 273 (349)
T 3v64_C 253 V--FEDSLYWTDWH---TKSINSANK 273 (349)
T ss_dssp E--ETTEEEEEETT---TTEEEEEET
T ss_pred E--ECCEEEEecCC---CCeEEEEEc
Confidence 3 23455544221 235677764
No 446
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.05 E-value=0.0024 Score=67.21 Aligned_cols=215 Identities=9% Similarity=0.018 Sum_probs=122.5
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec-CC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF-PN 247 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~-~~ 247 (734)
.|+.+++.++.............+++|.+++..||++... ..+|+++++++...+ .+... ..
T Consensus 97 ~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~---------------~~~I~r~~~~g~~~~--~~~~~~~~ 159 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT---------------LDRILRANLNGSNVE--EVVSTGLE 159 (386)
T ss_dssp CEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT---------------TTEEEEEETTSCCEE--EEECSSCS
T ss_pred cceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC---------------CCcEEEEecCCCCcE--EEEeCCCC
Confidence 5888898877643222222233689999988889887532 237999988765321 22221 11
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCCC
Q psy4818 248 GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNA 325 (734)
Q Consensus 248 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~ 325 (734)
.+ .++++++.++.|+++... ...|+++++++. ....++. +...-.. .++|++..||+.-..
T Consensus 160 ~p---~glavd~~~g~lY~~d~~---~~~I~~~~~dg~---------~~~~l~~~~l~~P~giavdp~~g~ly~td~~-- 222 (386)
T 3v65_B 160 SP---GGLAVDWVHDKLYWTDSG---TSRIEVANLDGA---------HRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-- 222 (386)
T ss_dssp CC---CCEEEETTTTEEEEEETT---TTEEEECBTTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEECS--
T ss_pred Cc---cEEEEEeCCCeEEEEcCC---CCeEEEEeCCCC---------ceEEeecCCCCCCcEEEEEcCCCeEEEeccC--
Confidence 22 367888888888876432 358999998762 1122222 1121122 377888888876432
Q ss_pred CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeee-CCCCceEEeec
Q psy4818 326 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHIS 403 (734)
Q Consensus 326 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l-~~~~g~v~~~~ 403 (734)
...+|+++++++.. .+.++... -....++.+. +++.||++-. ....|+++++ +|...+.+ ....+...+++
T Consensus 223 ~~~~I~r~~~dG~~---~~~~~~~~-~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~-dG~~~~~~~~~~~~~P~gia 295 (386)
T 3v65_B 223 NTPRIEASSMDGSG---RRIIADTH-LFWPNGLTIDYAGRRMYWVDA--KHHVIERANL-DGSHRKAVISQGLPHPFAIT 295 (386)
T ss_dssp SSCEEEEEETTSCS---CEEEECSS-CSCEEEEEEEGGGTEEEEEET--TTTEEEEECT-TSCSCEEEECSSCSSEEEEE
T ss_pred CCCEEEEEeCCCCC---cEEEEECC-CCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeC-CCCeeEEEEECCCCCceEEE
Confidence 23679999998754 24444333 2233455554 4578887743 3468999998 55543333 22222233444
Q ss_pred cCcccceEEEEEecCCCCceEEEEeC
Q psy4818 404 GRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 404 ~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ +++.++++-. .-..|+++|.
T Consensus 296 v--~~~~ly~td~---~~~~V~~~~~ 316 (386)
T 3v65_B 296 V--FEDSLYWTDW---HTKSINSANK 316 (386)
T ss_dssp E--ETTEEEEEET---TTTEEEEEET
T ss_pred E--ECCEEEEeeC---CCCeEEEEEC
Confidence 4 3345555422 1246777774
No 447
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.02 E-value=0.0091 Score=63.00 Aligned_cols=228 Identities=7% Similarity=0.025 Sum_probs=130.4
Q ss_pred EEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC----cccccccc-ccc
Q psy4818 116 ILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVLKN-VKF 190 (734)
Q Consensus 116 ~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~----~~~~~~~~-~~~ 190 (734)
.|.+.+..+.....++.. + ....++.|++.++.|.|+-... ..|+.+++.++. ........ ...
T Consensus 93 ~I~~i~l~~~~~~~~~~~--~-----~~~~~l~~d~~~~~lywsD~~~----~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPN--L-----RNVVALDTEVASNRIYWSDLSQ----RMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEECS--C-----SCEEEEEEETTTTEEEEEETTT----TEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEEccCCcceeEeccc--c-----CcceEEeeeeccCceEEEecCC----CeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 366666555544555431 1 2256889999888887764333 368888887632 11111111 122
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
.+++..+.++.||++.. ...+|.+.++++... ..+.... ...-.+++..|.+.+|+++...
T Consensus 162 ~glavD~~~~~lY~~d~---------------~~~~I~~~~~~g~~~--~~l~~~~--~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDS---------------VLGTVSVADTKGVKR--KTLFREN--GSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp EEEEEETTTTEEEEEET---------------TTTEEEEECTTTCSE--EEEEECS--SCCEEEEEEETTTTEEEEEECS
T ss_pred ccEEEEecCCceEEEEC---------------CCCeEEEEeCCCCce--EEEEeCC--CCCcceEEEecccCeEEEEeCC
Confidence 46788777778877642 123788888875432 2233221 1123578999999998876532
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeecc-ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 348 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~-~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 348 (734)
....|+++++++. ....++.. ...-.. .+++++++||+.-. ...+|.++++++.. .+.++.
T Consensus 223 --~~~~I~~~~~dG~---------~~~~~~~~~l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~ 285 (400)
T 3p5b_L 223 --TPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILE 285 (400)
T ss_dssp --SSCCEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCC---CEEEEE
T ss_pred --CCCEEEEEeCCCC---------ccEEEEECCCCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCCc---cEEEEe
Confidence 2358999999872 12223221 111112 38888899998633 34679999998754 344444
Q ss_pred CCC-CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeC
Q psy4818 349 EDE-NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 349 ~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~ 393 (734)
... .....++.+. ++.+|++.. +...|++++..+|+.++.|.
T Consensus 286 ~~~~l~~P~gl~v~-~~~lywtd~--~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 286 DEKRLAHPFSLAVF-EDKVFWTDI--INEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp CSSTTSSEEEEEEE-TTEEEEEES--SSCSEEEEESSSCCCCEEEE
T ss_pred CCCCCCCCEEEEEe-CCEEEEecC--CCCeEEEEEcCCCCceEEEe
Confidence 321 1122344444 478887763 33678999876887655554
No 448
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.01 E-value=0.00097 Score=66.59 Aligned_cols=219 Identities=11% Similarity=0.060 Sum_probs=116.5
Q ss_pred ceEEEEEEECCCCCcccccc-cc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEE
Q psy4818 166 DWNTLHIKDVDTGKDYPEVL-KN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 243 (734)
Q Consensus 166 ~~~~l~v~dl~~g~~~~~~~-~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~ 243 (734)
....|+++|.++|+.+.... .. .....+.++|||+.|+ +.+ ..|+.++. ++. .+--+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~----------------~~V~~~d~-~G~--~~W~~ 71 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYS----------------KGAKMITR-DGR--ELWNI 71 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECB----------------SEEEEECT-TSC--EEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCC----------------CCEEEECC-CCC--EEEEE
Confidence 33679999999998654322 21 1236788999998555 321 14666665 332 11122
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-c----c-cceEEEEEecCCeE
Q psy4818 244 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G----M-DHHHEIIANNGPEL 317 (734)
Q Consensus 244 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~----~-~~~~~~~s~dg~~l 317 (734)
..+. .....++.+++||+.++.... ....++.++.++ + .-+..-.. . . ......+.++|+.+
T Consensus 72 ~~~~-~~~~~~~~~~~dG~~lv~~~~---~~~~v~~vd~~G-k-------~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 72 AAPA-GCEMQTARILPDGNALVAWCG---HPSTILEVNMKG-E-------VLSKTEFETGIERPHAQFRQINKNKKGNYL 139 (276)
T ss_dssp ECCT-TCEEEEEEECTTSCEEEEEES---TTEEEEEECTTS-C-------EEEEEEECCSCSSGGGSCSCCEECTTSCEE
T ss_pred cCCC-CccccccEECCCCCEEEEecC---CCCEEEEEeCCC-C-------EEEEEeccCCCCcccccccCceECCCCCEE
Confidence 2211 123456789999999875432 135677777644 1 00111000 0 0 00111256788765
Q ss_pred EEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC--
Q psy4818 318 IVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-- 395 (734)
Q Consensus 318 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-- 395 (734)
+..+ .+.+|+.+|.+ ++ ..|+.-.+ ..........+ +.+++....+ .+|+.+|..+|+.+.++...
T Consensus 140 v~~~----~~~~v~~~d~~-G~-~~w~~~~~---~~~~~~~~~~~-g~~~v~~~~~--~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 140 VPLF----ATSEVREIAPN-GQ-LLNSVKLS---GTPFSSAFLDN-GDCLVACGDA--HCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp EEET----TTTEEEEECTT-SC-EEEEEECS---SCCCEEEECTT-SCEEEECBTT--SEEEEECTTTCCEEEEEEGGGS
T ss_pred EEec----CCCEEEEECCC-CC-EEEEEECC---CCccceeEcCC-CCEEEEeCCC--CeEEEEeCcCCcEEEEecCCCC
Confidence 5332 24579999987 43 12332221 12223333333 5666554433 47999999889987666421
Q ss_pred ----CceEEeeccCcccceEEEEEecCC------CCceEEEEeC
Q psy4818 396 ----LGQITHISGRRKYNEVFYGFTSFL------QPGTIYHCNI 429 (734)
Q Consensus 396 ----~g~v~~~~~~~d~~~l~~~~ss~~------~P~~~~~~d~ 429 (734)
...+.++...+++..++..+.+.. ...+++.+|.
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence 112445555667765555543432 3557888876
No 449
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.00 E-value=1.8e-05 Score=83.78 Aligned_cols=107 Identities=9% Similarity=0.035 Sum_probs=64.7
Q ss_pred CCCcEEEEecCCCCCc------CCccccH---HHHHHHHhcCeEEEEEecccCCCCCchhhhccc---------cccC--
Q psy4818 486 RRNPVIIYGYGGYGVS------VLPTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR---------LLKK-- 545 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~------~~~~~~~---~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~---------~~~~-- 545 (734)
+..|.||++||..+.. ....|.. .+...|.++||.|+++|+||. |........ ...+
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~---G~S~~~~~~l~~~i~~g~g~sg~~ 126 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSAL---ASNHERAVELYYYLKGGRVDYGAA 126 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSS---SCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCC---CCCccchHHhhhhhhhcccccccc
Confidence 4556788999986642 1234431 245677777999999999994 433321100 0000
Q ss_pred -------CCchhHHHHHHHHHHHcCCCC-CCcEEEEEcChHHHHHHHHHhc--------------------------CCC
Q psy4818 546 -------QNCFDDFQAAAEYMINKKYTK-PKYITIMGGSNGGLLVGACLNQ--------------------------RPE 591 (734)
Q Consensus 546 -------~~~~~D~~~~~~~l~~~~~~d-~~ri~i~G~S~GG~~~~~~~~~--------------------------~p~ 591 (734)
..-.+|+.+. ++. .. ..++.|+|||+||+++..++.. +|+
T Consensus 127 ~~~~~~~~~~a~dl~~l----l~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~ 200 (431)
T 2hih_A 127 HSEKYGHERYGKTYEGV----LKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDN 200 (431)
T ss_dssp HHHHHTCCSEEEEECCS----CTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCS
T ss_pred ccccCCHHHHHHHHHHH----HHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCccc
Confidence 0000111111 111 12 3689999999999999998765 688
Q ss_pred ceeEEEEcCC
Q psy4818 592 LYGAALILVG 601 (734)
Q Consensus 592 ~~~a~v~~~~ 601 (734)
.++.+|+.++
T Consensus 201 ~V~slv~i~t 210 (431)
T 2hih_A 201 MVTSITTIAT 210 (431)
T ss_dssp CEEEEEEESC
T ss_pred ceeEEEEECC
Confidence 8898888765
No 450
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.0014 Score=64.34 Aligned_cols=195 Identities=13% Similarity=0.059 Sum_probs=108.2
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.++||| +|..+....|. ..|.++|+++|+.+....-+....+...+++|+.||.... .
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~--s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~---------------~ 84 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGR--SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW---------------L 84 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTT--CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET---------------T
T ss_pred cccEEEeCCC-eEEEECCCCCC--CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe---------------c
Confidence 3578899996 44444322222 5899999999997553221122233455667888777653 2
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
...+++++..+... +..+..+ .+ .+...++||++|+++. + .+.|+++|.++.. ....+.-+.
T Consensus 85 ~~~v~viD~~t~~v--~~~i~~g-~~---~g~glt~Dg~~l~vs~--g--s~~l~viD~~t~~--------v~~~I~Vg~ 146 (266)
T 2iwa_A 85 KNIGFIYDRRTLSN--IKNFTHQ-MK---DGWGLATDGKILYGSD--G--TSILYEIDPHTFK--------LIKKHNVKY 146 (266)
T ss_dssp CSEEEEEETTTTEE--EEEEECC-SS---SCCEEEECSSSEEEEC--S--SSEEEEECTTTCC--------EEEEEECEE
T ss_pred CCEEEEEECCCCcE--EEEEECC-CC---CeEEEEECCCEEEEEC--C--CCeEEEEECCCCc--------EEEEEEECC
Confidence 34788888876532 1122211 01 1245788999988642 2 3699999998821 112221111
Q ss_pred c--c---eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC------------CCCceeEEEEEeeC-C
Q psy4818 304 D--H---HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE------------DENRTLDVVAAVAN-N 364 (734)
Q Consensus 304 ~--~---~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~-~ 364 (734)
. . .... |. +| ++|..... ...|.++|.++++ +...+.- ....+..++.+..+ +
T Consensus 147 ~~~p~~~~nele~~-dg-~lyvn~~~---~~~V~vID~~tg~---V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NG-EVWANIWQ---TDCIARISAKDGT---LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp TTEECCCEEEEEEE-TT-EEEEEETT---SSEEEEEETTTCC---EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred CCcccccceeEEEE-CC-EEEEecCC---CCeEEEEECCCCc---EEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 1 0 1111 44 54 67644322 3469999998876 2322221 11235567766643 4
Q ss_pred EEEEEEEeCCceeEEEEECC
Q psy4818 365 KLIVHYIQNVRSVMDLHDLN 384 (734)
Q Consensus 365 ~l~~~~~~~~~~~l~~~dl~ 384 (734)
+++++.. ..+.|+.+++.
T Consensus 219 ~lfVTgk--~~~~v~~i~l~ 236 (266)
T 2iwa_A 219 RIFVTGK--LWPKLFEIKLH 236 (266)
T ss_dssp EEEEEET--TCSEEEEEEEE
T ss_pred EEEEECC--CCCeEEEEEEe
Confidence 5555542 23678888874
No 451
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.99 E-value=7.1e-05 Score=76.63 Aligned_cols=209 Identities=10% Similarity=0.024 Sum_probs=107.8
Q ss_pred cEEEeeEEeCC--CCcEEEEEEeCCCCceEEEEEEECCCCCcccc-c--ccccccCeeEEEcC--CcEEEEEEEecCCCC
Q psy4818 141 TTALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-V--LKNVKFPSISWTHD--HKGFFYNQYCDINGT 213 (734)
Q Consensus 141 ~~~~~~~~~SP--DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~--~~~~~~~~~~wSpD--g~~l~y~~~~~~~~~ 213 (734)
...+..++||| +|++||-... . .+|++||+.+++.... . .....+..++|+|| |+.|+-...+.
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~-D----~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~---- 127 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSY-D----RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG---- 127 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEET-T----SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS----
T ss_pred CccEEEEEeCCCCCCCEEEEEEC-C----CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC----
Confidence 34578899997 4888775442 2 3699999998752211 1 12223468999998 66565544322
Q ss_pred CCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCC-----------------cEEEEEEecCCCCce
Q psy4818 214 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCG-----------------RYLLVSTSNNTQGSD 276 (734)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG-----------------~~l~~~~~~~~~~~~ 276 (734)
.|+++++.+..... .......+......+.|+|++ ++|+ .+.....
T Consensus 128 ------------~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----sgs~D~~ 190 (316)
T 3bg1_A 128 ------------AISLLTYTGEGQWE-VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA----SGGCDNL 190 (316)
T ss_dssp ------------CEEEEEECSSSCEE-ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE----CCBTTSB
T ss_pred ------------CEEEEecCCCCCcc-eeeeeccccCCcceEEEccccCCccccccccccCccccceEE----EecCCCe
Confidence 57777766542100 001111122233467888873 4554 2223357
Q ss_pred EEEEeCCCCCCCcccCCCCceeeeccccceEEE-EEecC----CeEEEEeCCCCCCceEEEEecCCCCCCCc-eEeecCC
Q psy4818 277 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEI-IANNG----PELIVKTTKNAPKGKVVTINLNNPCEKNW-KTLIPED 350 (734)
Q Consensus 277 i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~-~s~dg----~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~ 350 (734)
|.+||+.++.. . .....+..+....... |+|++ +.|+-.+. +..|..|++++.....+ ..++...
T Consensus 191 v~lWd~~~~~~--~---~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~----D~~v~iw~~~~~~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 191 IKLWKEEEDGQ--W---KEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ----DGRVFIWTCDDASSNTWSPKLLHKF 261 (316)
T ss_dssp CCEEEECTTSC--E---EEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET----TCEEEEEECSSTTCCCCBCCEEEEC
T ss_pred EEEEEeCCCCc--c---ceeeecccCCCceEEEEecCCCCCCCceEEEEcC----CCeEEEEEccCccccchhhhhhhcC
Confidence 88888865110 0 0111122222223333 88886 44443332 34688888875321111 1122222
Q ss_pred CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECC-CCc
Q psy4818 351 ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-TGK 387 (734)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~-~g~ 387 (734)
...+..+.+..++.++++...++ .+.+|+.. .|+
T Consensus 262 -~~~v~~v~~sp~g~~las~~~D~--~v~lw~~~~~g~ 296 (316)
T 3bg1_A 262 -NDVVWHVSWSITANILAVSGGDN--KVTLWKESVDGQ 296 (316)
T ss_dssp -SSCEEEEEECTTTCCEEEEESSS--CEEEEEECTTSC
T ss_pred -CCcEEEEEEcCCCCEEEEEcCCC--eEEEEEECCCCc
Confidence 23344555555466666776664 56677653 343
No 452
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.98 E-value=0.0021 Score=65.83 Aligned_cols=187 Identities=9% Similarity=0.002 Sum_probs=104.2
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC--CCceEEEEEEECCCCCcccccccccccCeeE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPSIS 194 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~--g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~ 194 (734)
|++.+..++..+.+.+.... .....+..+.++|||+. .++.... ......||.++ +|+............+++
T Consensus 111 l~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESD--LPGNRSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSIC 185 (326)
T ss_dssp EEEEETTTCCEEEEECSSTT--CTTEEEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEE
T ss_pred EEEEECCCCcEEEEeeCCCC--CCCCCCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeE
Confidence 77777666666666553211 11345788999999984 4443211 01235799998 465332211111225789
Q ss_pred EEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECC--CC-CCCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 195 WTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG--TE-QDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 195 wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--t~-~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
|+|||+.||++... ...|++++++ ++ .... ..+...........++.+++||+. ++...
T Consensus 186 ~s~dg~~lyv~~~~---------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l-wva~~- 248 (326)
T 2ghs_A 186 FSPDGTTGYFVDTK---------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-WNARW- 248 (326)
T ss_dssp ECTTSCEEEEEETT---------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-EEEEE-
T ss_pred EcCCCCEEEEEECC---------------CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE-EEEEe-
Confidence 99999999886531 2378999875 33 2211 222222212234457889999974 33322
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEE-ecCCeEEEEeCCCCC----------CceEEEEecC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIA-NNGPELIVKTTKNAP----------KGKVVTINLN 336 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~~~~~----------~~~l~~~d~~ 336 (734)
....|++++.++ . ....+......... .|+ +|++.||+.+...+. .+.||++++.
T Consensus 249 --~~~~v~~~d~~g-~--------~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g~~~~~~~~ 315 (326)
T 2ghs_A 249 --GEGAVDRYDTDG-N--------HIARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTFELGIE 315 (326)
T ss_dssp --TTTEEEEECTTC-C--------EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSSC
T ss_pred --CCCEEEEECCCC-C--------EEEEEECCCCCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCceEEEEeCC
Confidence 125799998854 1 11112111111222 377 888889988776531 2568887753
No 453
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.98 E-value=3.4e-05 Score=77.67 Aligned_cols=95 Identities=11% Similarity=-0.059 Sum_probs=60.2
Q ss_pred CCCcEEEEecCCCCCcCCccccHHHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHHHHHcCCC
Q psy4818 486 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 565 (734)
Q Consensus 486 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 565 (734)
+..|.||++||..+... .|.. +...| .+.|+.+|+++.. ...+++++.+.+..++..-.
T Consensus 22 ~~~~~l~~~hg~~~~~~--~~~~-~~~~L---~~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~~- 80 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTT--VFHS-LASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQVQ- 80 (283)
T ss_dssp SSSCCEEEECCTTCCSG--GGHH-HHHHC---SSCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTTC-
T ss_pred CCCCeEEEECCCCCCHH--HHHH-HHHhc---CceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHhC-
Confidence 44577889999866543 3332 33444 3889999986411 12345565554444443321
Q ss_pred CCCcEEEEEcChHHHHHHHHHhcC---CCcee---EEEEcCC
Q psy4818 566 KPKYITIMGGSNGGLLVGACLNQR---PELYG---AALILVG 601 (734)
Q Consensus 566 d~~ri~i~G~S~GG~~~~~~~~~~---p~~~~---a~v~~~~ 601 (734)
..+++.++|||+||.++..++.+. |+.++ .+|+..+
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 225799999999999999988754 77776 6666554
No 454
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.96 E-value=0.0032 Score=62.89 Aligned_cols=238 Identities=9% Similarity=0.036 Sum_probs=123.9
Q ss_pred EEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc-----c-cccCeeEEEcCCcEEEEEEEecCCCCCC
Q psy4818 142 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-----N-VKFPSISWTHDHKGFFYNQYCDINGTAD 215 (734)
Q Consensus 142 ~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-----~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~ 215 (734)
....+++++|||+. .+ .+.. ...|+++|.++......... . .....+++++.+..|+.+...
T Consensus 30 ~~p~~v~~~~~g~l-~v-~~~~---~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~------- 97 (286)
T 1q7f_A 30 TEPSGVAVNAQNDI-IV-ADTN---NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS------- 97 (286)
T ss_dssp SCEEEEEECTTCCE-EE-EEGG---GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-------
T ss_pred CCCceEEECCCCCE-EE-EECC---CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-------
Confidence 34678899999983 33 3222 13699999874322111110 0 122467785333456655421
Q ss_pred CCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCC
Q psy4818 216 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 295 (734)
Q Consensus 216 ~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 295 (734)
....|++++.... .+..+... ......+++++|||+ |++... ....|++++.++ . .
T Consensus 98 -------~~~~i~~~d~~g~---~~~~~~~~-~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~~~~g-~--------~ 153 (286)
T 1q7f_A 98 -------PTHQIQIYNQYGQ---FVRKFGAT-ILQHPRGVTVDNKGR-IIVVEC---KVMRVIIFDQNG-N--------V 153 (286)
T ss_dssp -------GGCEEEEECTTSC---EEEEECTT-TCSCEEEEEECTTSC-EEEEET---TTTEEEEECTTS-C--------E
T ss_pred -------CCCEEEEECCCCc---EEEEecCc-cCCCceEEEEeCCCC-EEEEEC---CCCEEEEEcCCC-C--------E
Confidence 1236777763321 11222211 112346789999998 444322 236899998755 1 1
Q ss_pred ceeee--ccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEe
Q psy4818 296 LKTVI--PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 372 (734)
Q Consensus 296 ~~~l~--~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 372 (734)
...+. ........ .++++|+ +|+.... ...|++++.++.. ...+...........+.+..++.+++....
T Consensus 154 ~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 154 LHKFGCSKHLEFPNGVVVNDKQE-IFISDNR---AHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEECTTTCSSEEEEEECSSSE-EEEEEGG---GTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred EEEeCCCCccCCcEEEEECCCCC-EEEEECC---CCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 11111 11111222 2777765 6654332 3569999986532 223322211123445555555677766543
Q ss_pred CCceeEEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 373 NVRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 373 ~~~~~l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
+ ...|.+|+. +|+.++.+... .....++.+++++ .++++ +. -..+.+++.
T Consensus 227 ~-~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~---~~~v~v~~~ 278 (286)
T 1q7f_A 227 N-NFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVLA-SK---DYRLYIYRY 278 (286)
T ss_dssp S-SCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-ET---TTEEEEEEC
T ss_pred C-CEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC-cEEEE-CC---CCeEEEEEc
Confidence 3 137999997 67766666433 2234467777776 46666 32 247777776
No 455
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.93 E-value=0.0015 Score=63.48 Aligned_cols=194 Identities=11% Similarity=0.100 Sum_probs=115.5
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
.++.|+ |+ .||.+.-.. ....|.++++.++...... ..+. . . ++...+++|+.|+.....
T Consensus 46 qGL~~~-~~-~LyestG~~-------------g~S~v~~vD~~Tgkv~~~~--~l~~-~-~-FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLN-------------GRSSIRKVDIESGKTLQQI--ELGK-R-Y-FGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEE-TT-EEEEEEEET-------------TEEEEEEECTTTCCEEEEE--ECCT-T-C-CEEEEEEETTEEEEEESS
T ss_pred ceEEEE-CC-EEEEECCCC-------------CCceEEEEECCCCcEEEEE--ecCC-c-c-ceeEEEEeCCEEEEEEee
Confidence 477887 65 666655321 2347888898887532221 2221 1 2 234566778888766432
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeec--
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-- 348 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-- 348 (734)
.+.++++|.+++. ...-+.-...++. +++||++||. ++ + ..+|+.+|.++.+. ...+.-
T Consensus 106 ---~~~v~v~D~~t~~---------~~~ti~~~~eG~g-lt~dg~~L~~-Sd--G-s~~i~~iDp~T~~v--~~~I~V~~ 166 (262)
T 3nol_A 106 ---NGLGFVWNIRNLR---------QVRSFNYDGEGWG-LTHNDQYLIM-SD--G-TPVLRFLDPESLTP--VRTITVTA 166 (262)
T ss_dssp ---SSEEEEEETTTCC---------EEEEEECSSCCCC-EEECSSCEEE-CC--S-SSEEEEECTTTCSE--EEEEECEE
T ss_pred ---CCEEEEEECccCc---------EEEEEECCCCceE-EecCCCEEEE-EC--C-CCeEEEEcCCCCeE--EEEEEecc
Confidence 3789999998831 1111111112222 6788887775 44 2 35699999987542 122211
Q ss_pred CC-CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC------------CceEEeeccCcccceEEEEE
Q psy4818 349 ED-ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD------------LGQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 349 ~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~------------~g~v~~~~~~~d~~~l~~~~ 415 (734)
.. +-..+..+.+.+ +.+++..-. ...|.++|+++|+.+..|... .....+++.++++++++++.
T Consensus 167 ~g~~~~~lNELe~~~-G~lyan~w~--~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 167 HGEELPELNELEWVD-GEIFANVWQ--TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTEECCCEEEEEEET-TEEEEEETT--SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCccccccceeEEEC-CEEEEEEcc--CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 11 112233344554 777755432 358999999999988777642 12346788889889999887
Q ss_pred ecCCCCceEEEEeC
Q psy4818 416 TSFLQPGTIYHCNI 429 (734)
Q Consensus 416 ss~~~P~~~~~~d~ 429 (734)
--+ +.+|.+.+
T Consensus 244 K~W---p~~~ev~~ 254 (262)
T 3nol_A 244 KLW---PKVFEITL 254 (262)
T ss_dssp TTC---SEEEEEEE
T ss_pred CCC---CceEEEEE
Confidence 766 46787766
No 456
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.92 E-value=0.00043 Score=75.25 Aligned_cols=217 Identities=11% Similarity=0.039 Sum_probs=113.9
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEe-C-CCCcEEEEEEeC------C------
Q psy4818 98 RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAF-S-DNGKHFAYCLSK------S------ 163 (734)
Q Consensus 98 ~~g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~-S-PDG~~la~~~~~------~------ 163 (734)
+||.++|- ++... ..+.|.+...-+-..++... .+ ....++++ + |||+++...... .
T Consensus 99 ~DG~~lfV--nd~~~--~rVavIdl~t~~~~~ii~ip---~g--~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 99 YDGRFLFM--NDKAN--TRVARVRCDVMKCDAILEIP---NA--KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEEEE--EETTT--TEEEEEETTTTEEEEEEECS---SC--CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cCCCEEEE--EcCCC--CEEEEEECCCceEeeEEeCC---CC--CCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 36666665 22212 44666665443323333321 11 11446666 6 999998554311 1
Q ss_pred -CCceEEEEEEECCCCCcccc-cccccccCeeEEEcCCcEEEEEEEecCCCCC-------------------------CC
Q psy4818 164 -GSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTA-------------------------DG 216 (734)
Q Consensus 164 -g~~~~~l~v~dl~~g~~~~~-~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~-------------------------~~ 216 (734)
......+-++|.++.+.+.. ..++ .......||||+++|.+..+...+.. +|
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 12346899999999875432 2223 34678899999999888765432210 01
Q ss_pred CcccccCCcEEEEEECCCCCCCC-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCC---CCcccC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP---DGKISG 292 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~---~~~l~~ 292 (734)
.. .....|-+++..+..... +.....+..+ .++.+|||||++++.. ...+.|.++|+++.. ..+|..
T Consensus 249 k~---~~i~~V~VID~~~~~~~~~~~~Ipvg~~P---hGv~~sPDGk~v~V~~---~~s~~VsVid~~~~~~~~~~~l~~ 319 (595)
T 1fwx_A 249 DY---QELNGVKVVDGRKEASSLFTRYIPIANNP---HGCNMAPDKKHLCVAG---KLSPTVTVLDVTRFDAVFYENADP 319 (595)
T ss_dssp CS---EEETTEEEEECSGGGCCSSEEEEEEESSC---CCEEECTTSSEEEEEC---TTSSBEEEEEGGGHHHHHHSCCCG
T ss_pred Ce---eEECcEEEEeCcccCCceeEEEEecCCCc---eEEEEcCCCCEEEEeC---CCCCeEEEEECcccccccccccCc
Confidence 00 011236666666521111 1112222223 3689999999998743 233689999998621 011111
Q ss_pred CCCce-eeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 293 KFPLK-TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 293 ~~~~~-~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
..... .+..+.......|++|| .+|..... ..+|..|++++
T Consensus 320 ~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~l---dsqV~kwdi~~ 361 (595)
T 1fwx_A 320 RSAVVAEPELGLGPLHTAFDGRG-NAYTSLFL---DSQVVKWNIED 361 (595)
T ss_dssp GGGEEECCBCCSCEEEEEECTTS-EEEEEETT---TTEEEEEEHHH
T ss_pred ccceEEEcCCCCCcceEEECCCC-eEEEEEec---CCcEEEEEhhH
Confidence 11111 11122222333499999 66654443 35688899865
No 457
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.91 E-value=4.4e-05 Score=79.57 Aligned_cols=88 Identities=14% Similarity=0.028 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCCCcCC-----ccccH---HHHHHHHhcCeEEEEEecccCCCCCchhhhccccccCCCchhHHHHHHHH
Q psy4818 487 RNPVIIYGYGGYGVSVL-----PTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY 558 (734)
Q Consensus 487 ~~P~vv~~hGg~~~~~~-----~~~~~---~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~ 558 (734)
..|.||++||..+.... ..|.. .+.+.|+++||.|+++|+||.| ..+..+ .++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G---~s~~~a----------~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS---SNWDRA----------CEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSB---CHHHHH----------HHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCC---CccccH----------HHHHHHHHh
Confidence 34568889998665321 22321 2346677789999999999943 322211 111111110
Q ss_pred --------HHH-----------cC----CCCCCcEEEEEcChHHHHHHHHHh
Q psy4818 559 --------MIN-----------KK----YTKPKYITIMGGSNGGLLVGACLN 587 (734)
Q Consensus 559 --------l~~-----------~~----~~d~~ri~i~G~S~GG~~~~~~~~ 587 (734)
+.+ .. ....+++.++||||||.++..++.
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~ 123 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVS 123 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHH
Confidence 110 00 123468999999999999999986
No 458
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.91 E-value=0.00049 Score=69.90 Aligned_cols=157 Identities=12% Similarity=0.025 Sum_probs=85.4
Q ss_pred eEEeCCCCcEEEEEEeCCC-------------CceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCC
Q psy4818 146 LYAFSDNGKHFAYCLSKSG-------------SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDING 212 (734)
Q Consensus 146 ~~~~SPDG~~la~~~~~~g-------------~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~ 212 (734)
.+.++|||+. .|+-..-| .....|+.+|.++|+..... ......+++|||||+.||++.....
T Consensus 135 ~i~~d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~-- 210 (305)
T 3dr2_A 135 DLIVARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ-- 210 (305)
T ss_dssp CEEECTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---
T ss_pred CEEECCCCCE-EEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCc--
Confidence 5788899873 33211001 11357999999888754332 2222357899999998877653210
Q ss_pred CCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 213 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
......|+++++.+.......++... ......++.+++||+ |++.. ...|++++.++ .
T Consensus 211 --------~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~-lwv~~-----~~gv~~~~~~g-~------ 268 (305)
T 3dr2_A 211 --------GHGSVEITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGW-LWSSS-----GTGVCVFDSDG-Q------ 268 (305)
T ss_dssp ----------CCCEEEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSC-EEECC-----SSEEEEECTTS-C------
T ss_pred --------CCCCCEEEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCC-EEEec-----CCcEEEECCCC-C------
Confidence 01124788888764321111122111 011223578899999 44322 24599999865 1
Q ss_pred CCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEec
Q psy4818 293 KFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINL 335 (734)
Q Consensus 293 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 335 (734)
....+..........|+++++.||+.++. .||++++
T Consensus 269 --~~~~~~~~~~~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 269 --LLGHIPTPGTASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp --EEEEEECSSCCCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred --EEEEEECCCceeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 11222211122222378888888887753 4888765
No 459
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.89 E-value=0.0027 Score=64.99 Aligned_cols=190 Identities=8% Similarity=0.039 Sum_probs=104.3
Q ss_pred eEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCC--CCceEEEEEEECCCCCcccccccccccCe
Q psy4818 115 SILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPS 192 (734)
Q Consensus 115 ~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~--g~~~~~l~v~dl~~g~~~~~~~~~~~~~~ 192 (734)
..|++.+..++..+.++.... ....+..+.++|||+.++ +.... +.....|+.+|.++++............+
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~----~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLS----TAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANG 186 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSS----SCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEE
T ss_pred ceEEEEeCCCCEEEEEEccCc----cCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCEEEEeecCCCcccc
Confidence 357777655555443332110 112367889999997443 33211 11235799999887764332211112357
Q ss_pred eEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCC-----eeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy4818 193 ISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDCGRYLLVS 267 (734)
Q Consensus 193 ~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~-----~~v~~~~~~~~~~~~~~~SpDG~~l~~~ 267 (734)
++|+|||+.|+++... ...|+++++.+..... ........ .....++.+++||+..+ .
T Consensus 187 i~~~~dg~~l~v~~~~---------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v-~ 249 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT---------------ANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYV-A 249 (333)
T ss_dssp EEECTTSSEEEEEEGG---------------GTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEE-E
T ss_pred eEECCCCCEEEEEeCC---------------CCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEE-E
Confidence 8999999988876531 2368888875421110 01111111 12445789999998433 2
Q ss_pred EecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc-------cceEEEEEecCCeEEEEeCCC--CCCceEEEEecCCC
Q psy4818 268 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-------DHHHEIIANNGPELIVKTTKN--APKGKVVTINLNNP 338 (734)
Q Consensus 268 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~-------~~~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~ 338 (734)
.. ....|+++|.++ . ....+.... ......|++||+.||+.++.. .....|+++++...
T Consensus 250 ~~---~~~~v~~~d~~g-~--------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 250 MY---GQGRVLVFNKRG-Y--------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp EE---TTTEEEEECTTS-C--------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSC
T ss_pred Ec---CCCEEEEECCCC-C--------EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccC
Confidence 21 125799998854 1 111121111 111223789988898887653 22457999987643
No 460
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.88 E-value=0.02 Score=60.13 Aligned_cols=232 Identities=13% Similarity=0.069 Sum_probs=117.1
Q ss_pred ceEEEEEEECCC-----CCccccc---ccccccCeeEE-----------E--cCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 166 DWNTLHIKDVDT-----GKDYPEV---LKNVKFPSISW-----------T--HDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 166 ~~~~l~v~dl~~-----g~~~~~~---~~~~~~~~~~w-----------S--pDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
..-.|.++|++. |+.+... ..+-....+.| + +|+++|+.... +.
T Consensus 41 ~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l---------------~s 105 (462)
T 2ece_A 41 RADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGL---------------RS 105 (462)
T ss_dssp CCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBT---------------TT
T ss_pred CCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccC---------------CC
Confidence 345688889886 5543211 11111235567 8 88887776543 23
Q ss_pred cEEEEEECCCCCCCCeeEEec-------CCCCeeEEEEEEecCCcEEEEEEecC---CCCceEEEEeCCCCCCCcccCCC
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEF-------PNGRSLGLHSEVTDCGRYLLVSTSNN---TQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~-------~~~~~~~~~~~~SpDG~~l~~~~~~~---~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
.+|+++++.+...+-.++-.. +-+...-..+..+||| |+++.... .....|.++|.++++ +
T Consensus 106 ~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~---v---- 176 (462)
T 2ece_A 106 SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFE---P---- 176 (462)
T ss_dssp CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCC---E----
T ss_pred CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCe---E----
Confidence 479999987654332222111 0011122356789999 55554332 122789999998732 1
Q ss_pred Cceeeecccc---ceEEE-EEecCCeEEEEeCCC----------------CCCceEEEEecCCCCCCCceEeecCC-CCc
Q psy4818 295 PLKTVIPGMD---HHHEI-IANNGPELIVKTTKN----------------APKGKVVTINLNNPCEKNWKTLIPED-ENR 353 (734)
Q Consensus 295 ~~~~l~~~~~---~~~~~-~s~dg~~l~~~s~~~----------------~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~ 353 (734)
......+.. -.+.+ |+|+++.+ ++++-. ....+|..+|+++++ ....+.-. +..
T Consensus 177 -~~~~~~~~~~~~~~Yd~~~~p~~~~m-vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---~~~tI~vg~~g~ 251 (462)
T 2ece_A 177 -LGKWEIDRGDQYLAYDFWWNLPNEVL-VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---RIHSLTLGEENR 251 (462)
T ss_dssp -EEECCSBCTTCCCCCCEEEETTTTEE-EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE---EEEEEESCTTEE
T ss_pred -EEEEccCCCCccccceEEECCCCCEE-EEccCcCccccccccchhhhhhccCCEEEEEECCCCc---EeeEEecCCCCC
Confidence 111111111 12333 79998844 455411 124579999998653 22222222 112
Q ss_pred eeEEEEE--e-eCCEEEEEEE---eCCceeEEEEECCCCce--eeeeCCC------------------CceEEeeccCcc
Q psy4818 354 TLDVVAA--V-ANNKLIVHYI---QNVRSVMDLHDLNTGKR--LHSFPLD------------------LGQITHISGRRK 407 (734)
Q Consensus 354 ~~~~~~~--~-~~~~l~~~~~---~~~~~~l~~~dl~~g~~--~~~l~~~------------------~g~v~~~~~~~d 407 (734)
....+.+ . +++.+|+... .+..+.|.++..++|+. .+.|..+ ......+..++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2222222 2 3344444443 11224565544433432 1111100 122346677899
Q ss_pred cceEEEEEecCCCCceEEEEeC
Q psy4818 408 YNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 408 ~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.|+++.-.. ..+..||+
T Consensus 332 GrfLYVSnrg~---d~VavfdV 350 (462)
T 2ece_A 332 DKFLYLSLWGI---GEVRQYDI 350 (462)
T ss_dssp SCEEEEEETTT---TEEEEEEC
T ss_pred CCEEEEEeCCC---CEEEEEEe
Confidence 98888765443 57889998
No 461
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.014 Score=66.95 Aligned_cols=206 Identities=7% Similarity=0.021 Sum_probs=120.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC----cccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~----~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..++.+++.+.+|.|+-... ..|+.+++.+.. ...... .-....+++..+.++.||++..
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~----~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~----------- 490 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQ----RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 490 (791)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----------
T ss_pred eEEEeecccCCeeEEeeccc----eeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec-----------
Confidence 46788999888777655432 368888887632 111111 1112367888888988887653
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 298 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 298 (734)
...+|++.++++.. ...+.... ...-.++++.|.+.+|+++... ....|+++++++. ....
T Consensus 491 ----~~~~I~v~~ldG~~--~~~l~~~~--l~~P~gIaVDp~~g~LYwtD~g--~~~~I~~~~~dG~---------~~~~ 551 (791)
T 3m0c_C 491 ----VLGTVSVADTKGVK--RKTLFREN--GSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV---------DIYS 551 (791)
T ss_dssp ----TTTEEEEEETTSSS--EEEEEECT--TCCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSC---------CEEE
T ss_pred ----CCCeEEEEeCCCCe--EEEEEeCC--CCCcceEEEecCCCCEEEecCC--CCCeEEEEecCCC---------ceEE
Confidence 13479999987653 22233221 1123578999999999886532 2268999999871 1222
Q ss_pred eeccc-cceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-CceeEEEEEeeCCEEEEEEEeCCc
Q psy4818 299 VIPGM-DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVR 375 (734)
Q Consensus 299 l~~~~-~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~ 375 (734)
++... ..-.. .+++.+++||+.-. ...+|.++++++.. .+.++.... .....++.+. +++||++-. ..
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~---~~~~I~~~d~dG~~---~~~v~~~~~~l~~P~glav~-~~~lYwtD~--~~ 622 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVF-EDKVFWTDI--IN 622 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEE-TTEEEEEET--TT
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeC---CCCcEEEEecCCCc---eEEEecCCCccCCCCEEEEe-CCEEEEEEC--CC
Confidence 33211 11112 26777888888632 34579999998765 344544321 1112244444 478887653 33
Q ss_pred eeEEEEECCCCceeeee
Q psy4818 376 SVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 376 ~~l~~~dl~~g~~~~~l 392 (734)
..|++++..+|+.++.|
T Consensus 623 ~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 623 EAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TEEEEEETTTCCCCEEE
T ss_pred CEEEEEeCCCCcceEEe
Confidence 68889987788755544
No 462
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.83 E-value=0.0026 Score=67.46 Aligned_cols=155 Identities=6% Similarity=0.014 Sum_probs=89.2
Q ss_pred EEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc----c-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 147 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV----L-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 147 ~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~----~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
++|+|||+.|+++ +..+. ..|++++..++...... . ......+++++|++..||+ .. .
T Consensus 176 ia~~~~g~~l~~~-d~~~~--~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d-~------------ 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWEGT--HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VD-S------------ 238 (409)
T ss_dssp CEECTTSSEEEEE-BSSTT--CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-EC-T------------
T ss_pred eeEecCCCcEEEE-ecCCC--ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EE-C------------
Confidence 8999999976554 43332 27999998876532111 1 1123367899997777877 32 1
Q ss_pred cCCcEEEEEECCCCCCCCeeEEec---CCCCeeE-E-EEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCc
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEF---PNGRSLG-L-HSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 296 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~---~~~~~~~-~-~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 296 (734)
..+|++++..+.. ..++.. ....... . +++++|++..|++... ....|++++.++ . .
T Consensus 239 --~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~---~~~~I~~~~~~g-~---------~ 300 (409)
T 3hrp_A 239 --NKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ---NLSSVYKITPDG-E---------C 300 (409)
T ss_dssp --TCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET---TTTEEEEECTTC-C---------E
T ss_pred --CCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCCCCEEEEEeC---CCCEEEEEecCC-C---------E
Confidence 2379999887653 223311 0111122 2 7899998888876532 236899998875 1 1
Q ss_pred eeeecc---------------ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCC
Q psy4818 297 KTVIPG---------------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 339 (734)
Q Consensus 297 ~~l~~~---------------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 339 (734)
..+... +..-.. .++++|+ ||+. +. ..+.+|.++++.++.
T Consensus 301 ~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~-~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 301 EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DG-FKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ET-TTTCEEEEEETTTTE
T ss_pred EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eC-CCCCEEEEEECCCCE
Confidence 111110 111112 3788887 6654 32 035679999965554
No 463
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.81 E-value=0.0089 Score=62.73 Aligned_cols=238 Identities=11% Similarity=0.068 Sum_probs=118.4
Q ss_pred eC--CCCcEEEEEEeCCCCceEEEEEEECCCCCc---cccccc--------c-cccCeeEEEcCCcEEEEEEEecCCCCC
Q psy4818 149 FS--DNGKHFAYCLSKSGSDWNTLHIKDVDTGKD---YPEVLK--------N-VKFPSISWTHDHKGFFYNQYCDINGTA 214 (734)
Q Consensus 149 ~S--PDG~~la~~~~~~g~~~~~l~v~dl~~g~~---~~~~~~--------~-~~~~~~~wSpDg~~l~y~~~~~~~~~~ 214 (734)
+| +|+++|....-.+ ..|+|+|+++... +..++. + .....+.-+||| |+.+......
T Consensus 89 ~~~~~~r~~l~v~~l~s----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~--- 159 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRS----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEE--- 159 (462)
T ss_dssp CCTTCCSCEEEEEBTTT----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETT---
T ss_pred cCCCccCCEEEEccCCC----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcC---
Confidence 37 8999887654333 4699999976521 112221 1 122345678999 5554443321
Q ss_pred CCCcccccCCcEEEEEECCCCCCCCeeEEecC-CCCeeEEEEEEecCCcEEEEEEec------C---------CCCceEE
Q psy4818 215 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP-NGRSLGLHSEVTDCGRYLLVSTSN------N---------TQGSDLH 278 (734)
Q Consensus 215 ~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~-~~~~~~~~~~~SpDG~~l~~~~~~------~---------~~~~~i~ 278 (734)
.+.+..|.+.+..|.... -.+... ....+.+++.|+||++.++.+... . .....|.
T Consensus 160 ------g~~~g~v~vlD~~T~~v~--~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~ 231 (462)
T 2ece_A 160 ------GEGPGGILMLDHYSFEPL--GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIH 231 (462)
T ss_dssp ------SCSCCEEEEECTTTCCEE--EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEE
T ss_pred ------CCCCCeEEEEECCCCeEE--EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEE
Confidence 233457888887765421 111111 112344568999999976643210 0 1237899
Q ss_pred EEeCCCCCCCcccCCCCceeeeccccceE----EE-EEecCCeEEEEeC--CCCCCceEEEEecCCCCCCCce--Eee--
Q psy4818 279 YFDLHSLPDGKISGKFPLKTVIPGMDHHH----EI-IANNGPELIVKTT--KNAPKGKVVTINLNNPCEKNWK--TLI-- 347 (734)
Q Consensus 279 ~~d~~~~~~~~l~~~~~~~~l~~~~~~~~----~~-~s~dg~~l~~~s~--~~~~~~~l~~~d~~~~~~~~~~--~l~-- 347 (734)
+||++++ ++ ...+..+..... .+ ++|+|+++|+... .......|+++..+.+. |. .++
T Consensus 232 v~D~~~~---k~-----~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~---~~~~~vIdi 300 (462)
T 2ece_A 232 FWDLRKR---KR-----IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK---WNAEKVIEI 300 (462)
T ss_dssp EEETTTT---EE-----EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE---EEEEEEEEE
T ss_pred EEECCCC---cE-----eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc---eeEEEEEeC
Confidence 9999872 11 112222111111 11 4899998887665 00012345543333221 11 110
Q ss_pred cCC---------C------CceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCC---ceeeeeCCC-C------------
Q psy4818 348 PED---------E------NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG---KRLHSFPLD-L------------ 396 (734)
Q Consensus 348 ~~~---------~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g---~~~~~l~~~-~------------ 396 (734)
+.. + ......+.+..+++.++.++. +...|.++|+.+. +.+..+... .
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr-g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW-GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET-TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeC-CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccC
Confidence 100 0 112233444444444444444 3367889987432 333344321 0
Q ss_pred -ceEEeeccCcccceEEEEE
Q psy4818 397 -GQITHISGRRKYNEVFYGF 415 (734)
Q Consensus 397 -g~v~~~~~~~d~~~l~~~~ 415 (734)
+.-..+..++|++.++++.
T Consensus 380 ~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEcCCCCEEEEEc
Confidence 1124567788998888775
No 464
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.80 E-value=0.0021 Score=69.96 Aligned_cols=246 Identities=10% Similarity=-0.005 Sum_probs=123.0
Q ss_pred EEeCC-----CCcEEEEEEeCCCCceEEEEEEECCCCCcccc-ccc-ccccCeeEE-E-cCCcEEEEEEEecCCCCCCCC
Q psy4818 147 YAFSD-----NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK-NVKFPSISW-T-HDHKGFFYNQYCDINGTADGT 217 (734)
Q Consensus 147 ~~~SP-----DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~-~~~-~~~~~~~~w-S-pDg~~l~y~~~~~~~~~~~~~ 217 (734)
+.+|. ||++|.. .+..+ ..|.++|+++.+.... ++. .....++++ + ||++++|........-..+|.
T Consensus 90 ~~~s~t~g~~DG~~lfV-nd~~~---~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFM-NDKAN---TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEETTEEEEEEEEE-EETTT---TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cccCCCCCCcCCCEEEE-EcCCC---CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 67777 9997765 44332 4799999999885431 222 122346666 5 999998665421100001121
Q ss_pred c-c-cccCCcEEEEEECCCCCCCCeeEEec--CCCCeeEEEEEEecCCcEEEEEEecCCC--------------------
Q psy4818 218 E-T-TAHMGQKIYYHVLGTEQDKDIPVVEF--PNGRSLGLHSEVTDCGRYLLVSTSNNTQ-------------------- 273 (734)
Q Consensus 218 ~-~-~~~~~~~l~~~~l~t~~~~~~~v~~~--~~~~~~~~~~~~SpDG~~l~~~~~~~~~-------------------- 273 (734)
. . .......+-+++.++.+ .+.+. ..++ ..+..||||++++.+......
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~----v~~qI~Vgg~p---d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~ 238 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWE----VAWQVLVSGNL---DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 238 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTE----EEEEEEESSCC---CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred ccccccccCceEEEEECCCCe----EEEEEEeCCCc---cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence 1 1 12233456777776542 22221 1122 356899999999887643211
Q ss_pred --------------CceEEEEeCCCCCCCcccCCCC-ceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCC
Q psy4818 274 --------------GSDLHYFDLHSLPDGKISGKFP-LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP 338 (734)
Q Consensus 274 --------------~~~i~~~d~~~~~~~~l~~~~~-~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 338 (734)
.+.+.++|..+.+ ... ...+-.+.....-.++|||+++|+ ++.. ...+.++|+++.
T Consensus 239 ~~~~~~v~~Gk~~~i~~V~VID~~~~~------~~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~--s~~VsVid~~~~ 309 (595)
T 1fwx_A 239 AEIEKAIAAGDYQELNGVKVVDGRKEA------SSLFTRYIPIANNPHGCNMAPDKKHLCV-AGKL--SPTVTVLDVTRF 309 (595)
T ss_dssp HHHHHHHHHTCSEEETTEEEEECSGGG------CCSSEEEEEEESSCCCEEECTTSSEEEE-ECTT--SSBEEEEEGGGH
T ss_pred cceeEeccCCCeeEECcEEEEeCcccC------CceeEEEEecCCCceEEEEcCCCCEEEE-eCCC--CCeEEEEECccc
Confidence 0235566665410 011 111111222222238999998775 4433 345888888743
Q ss_pred C------CCCceEeecCC-CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCC----------CceeeeeCCC--CceE
Q psy4818 339 C------EKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT----------GKRLHSFPLD--LGQI 399 (734)
Q Consensus 339 ~------~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~----------g~~~~~l~~~--~g~v 399 (734)
. ...-..+...- .+.-...+.+..++.+|++..-+ +++..||+++ .+.+..++.. .|..
T Consensus 310 ~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ld--sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~ 387 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLD--SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHL 387 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTT--TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEE
T ss_pred ccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecC--CcEEEEEhhHhhhhhcccccceeEEEeecccccccc
Confidence 1 00000011111 01112233444445555444333 6899999865 3344555443 2322
Q ss_pred E---eeccCcccceEEEE
Q psy4818 400 T---HISGRRKYNEVFYG 414 (734)
Q Consensus 400 ~---~~~~~~d~~~l~~~ 414 (734)
. +...++|++.++..
T Consensus 388 ~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 388 KTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EETTTTSTTCCSSEEEEE
T ss_pred eeccceEeCCCCCEEEEc
Confidence 1 33567888776544
No 465
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.80 E-value=0.012 Score=62.00 Aligned_cols=219 Identities=10% Similarity=0.012 Sum_probs=121.9
Q ss_pred EEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC--CCCeeEEec
Q psy4818 168 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVEF 245 (734)
Q Consensus 168 ~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~--~~~~~v~~~ 245 (734)
..|+.++++++.............+++|.+++..||++... ..+|++.++.+.. .....+...
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~---------------~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS---------------QRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETT---------------TTEEEEEEC------CCCEEEECS
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecC---------------CCeEEEEEcccCCCCCcceEEEeC
Confidence 36899999877643222221233689999988889887532 2378888886532 112233321
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 323 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~ 323 (734)
. .....++++.+.++.|++... ....|+++++++. ....++. ....-.. .+.|.++.||+.-..
T Consensus 157 ~--~~~p~glavD~~~~~lY~~d~---~~~~I~~~~~~g~---------~~~~l~~~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 157 D--IQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp S--CSCEEEEEEETTTTEEEEEET---TTTEEEEECTTTC---------SEEEEEECSSCCEEEEEEETTTTEEEEEECS
T ss_pred C--CCCcccEEEEecCCceEEEEC---CCCeEEEEeCCCC---------ceEEEEeCCCCCcceEEEecccCeEEEEeCC
Confidence 1 123357888888888887643 2368999999872 1223332 2221222 377777888876432
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeC-CC--CceE
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LD--LGQI 399 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~-~~--~g~v 399 (734)
...+|+++++++.. .+.++... -....++.+. +++.||++-. ....|+++|+ +|...+.+. .+ ....
T Consensus 223 --~~~~I~~~~~dG~~---~~~~~~~~-l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~-dG~~~~~~~~~~~~l~~P 293 (400)
T 3p5b_L 223 --TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDV-NGGNRKTILEDEKRLAHP 293 (400)
T ss_dssp --SSCCEEEEETTSCS---CEEEECSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEET-TSCCCEEEEECSSTTSSE
T ss_pred --CCCEEEEEeCCCCc---cEEEEECC-CCceEEEEEEeCCCEEEEEEC--CCCEEEEEeC-CCCccEEEEeCCCCCCCC
Confidence 23579999998754 24444432 2334455555 4577887643 3468999999 565434432 11 1122
Q ss_pred EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 400 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+++. +++.++++-.. -..|+++|.
T Consensus 294 ~gl~v--~~~~lywtd~~---~~~V~~~~~ 318 (400)
T 3p5b_L 294 FSLAV--FEDKVFWTDII---NEAIFSANR 318 (400)
T ss_dssp EEEEE--ETTEEEEEESS---SCSEEEEES
T ss_pred EEEEE--eCCEEEEecCC---CCeEEEEEc
Confidence 23433 34455554321 235777775
No 466
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.79 E-value=0.023 Score=63.64 Aligned_cols=225 Identities=8% Similarity=0.011 Sum_probs=134.0
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEE
Q psy4818 117 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISW 195 (734)
Q Consensus 117 l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~w 195 (734)
|.+.+..+.....++-...+ ....++.|++++.+|.++-... ..|+.++++++........+ ....+++.
T Consensus 17 I~~i~l~~~~~~~~~~~~~~-----~~~~~l~~d~~~~~lywtD~~~----~~I~r~~~~g~~~~~v~~~g~~~P~GlAv 87 (628)
T 4a0p_A 17 IRRISLETNNNNVAIPLTGV-----KEASALDFDVTDNRIYWTDISL----KTISRAFMNGSALEHVVEFGLDYPEGMAV 87 (628)
T ss_dssp EEEEESSCTTCEEECCCCSC-----SCEEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred EEEEECCCCCcceEEEcCCC-----CceEEEEEECCCCEEEEEECCC----CeEEEEECCCCCcEEEEeCCCCCcceEEE
Confidence 56666544433443332222 2256789999998887765433 36899998876432211111 12357888
Q ss_pred EcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEE-ecCCCCeeEEEEEEecCCcEEEEEEecCCCC
Q psy4818 196 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV-EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG 274 (734)
Q Consensus 196 SpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~-~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 274 (734)
.+.++.||++.. ...+|.+.++++... ..+. ..-. .-.++++.|...+|+++... ..
T Consensus 88 D~~~~~LY~tD~---------------~~~~I~v~~~dG~~~--~~l~~~~l~---~P~~iavdp~~G~lY~tD~g--~~ 145 (628)
T 4a0p_A 88 DWLGKNLYWADT---------------GTNRIEVSKLDGQHR--QVLVWKDLD---SPRALALDPAEGFMYWTEWG--GK 145 (628)
T ss_dssp ETTTTEEEEEET---------------TTTEEEEEETTSTTC--EEEECSSCC---CEEEEEEETTTTEEEEEECS--SS
T ss_pred EeCCCEEEEEEC---------------CCCEEEEEecCCCcE--EEEEeCCCC---CcccEEEccCCCeEEEeCCC--CC
Confidence 888888888642 134789888876532 2233 2222 23578999988888876532 24
Q ss_pred ceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCc
Q psy4818 275 SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 353 (734)
Q Consensus 275 ~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 353 (734)
..|+.+++++. ....++.+...-.. .+++++++||+.-. ....|.++++++.. ..++...-..
T Consensus 146 ~~I~r~~~dG~---------~~~~l~~~~~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~~----~~v~~~~l~~ 209 (628)
T 4a0p_A 146 PKIDRAAMDGS---------ERTTLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLN----REVIADDLPH 209 (628)
T ss_dssp CEEEEEETTSC---------SCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS----CEEEEECCSC
T ss_pred CEEEEEeCCCC---------ceEEEECCCCCcceEEEccccCEEEEEEC---CCCEEEEEcCCCCc----eEEeeccCCC
Confidence 69999999872 22333332222222 27888899988643 24579999998755 2344333222
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
. .++.+.. +++|++-. ....|+++|..+|+..+.+
T Consensus 210 P-~glav~~-~~ly~tD~--~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 210 P-FGLTQYQ-DYIYWTDW--SRRSIERANKTSGQNRTII 244 (628)
T ss_dssp E-EEEEEET-TEEEEEET--TTTEEEEEETTTCCSCEEE
T ss_pred c-eEEEEEC-CEEEEecC--CCCEEEEEECCCCCceEEE
Confidence 2 3454554 78887653 2357889997777654433
No 467
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.77 E-value=0.002 Score=66.60 Aligned_cols=249 Identities=10% Similarity=0.021 Sum_probs=124.3
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc----c---cccccCeeEEEcCCcEEEEEEEecCCCCCCC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV----L---KNVKFPSISWTHDHKGFFYNQYCDINGTADG 216 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~----~---~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~ 216 (734)
..++++||||+.++ +....+....+|+.++ +|+..+.. . .-....+++++|||+ |+.+....
T Consensus 19 p~~va~~~~g~~~v-~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~------- 87 (343)
T 2qe8_A 19 PGNITLTPDGRLFL-SLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN------- 87 (343)
T ss_dssp EEEEEECTTSCEEE-EECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH-------
T ss_pred cceEEECCCCCEEE-EeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC-------
Confidence 56899999998533 3222111114678777 55533110 0 011235789999975 66553210
Q ss_pred CcccccCCcEEEEEECCCCCCCCeeEEecCC----CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccC
Q psy4818 217 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPN----GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 292 (734)
Q Consensus 217 ~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~----~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 292 (734)
......+|+++++.++.. +..+..+. ...+..+++++|++..++++.........|+++|+.++....+..
T Consensus 88 ---~~~~~~~i~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 88 ---QSKSVPKLVAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp ---HHTSCCEEEEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred ---CcCCCCeEEEEECCCCeE--EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 000134788888876531 12222211 112345788999887777664321133689999987643211110
Q ss_pred C---C---Cceeeeccc---------------cceEE-EEEecCCeEEEEeCCCCCCceEEEEecCC---CCC------C
Q psy4818 293 K---F---PLKTVIPGM---------------DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN---PCE------K 341 (734)
Q Consensus 293 ~---~---~~~~l~~~~---------------~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~---~~~------~ 341 (734)
. . +......+. ..... .|+|||+.||+.... ..+|++++.+. +.. .
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH---STSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS---CSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC---CCeEEEEEHHHhcCCCCChhhhhc
Confidence 0 0 000000100 01122 389999989887553 23799988531 110 0
Q ss_pred CceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-CceEEeeccCcccceEEEEEec
Q psy4818 342 NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTS 417 (734)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-~g~v~~~~~~~d~~~l~~~~ss 417 (734)
.+. ...+. ....++.+..++.++++...+ ..|.+||.++|+....+..+ .....++.+++++ .++++.+.
T Consensus 240 ~~~-~~g~~--g~pdgia~d~~G~l~va~~~~--~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g-~l~v~~~~ 310 (343)
T 2qe8_A 240 KIE-RYSEK--PICDGISIDKDHNIYVGDLAH--SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG-YLYFDCNQ 310 (343)
T ss_dssp TCE-EEEEC--CSCSCEEECTTCCEEEEEGGG--TEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS-CEEEEECC
T ss_pred ceE-ecccC--CCCceEEECCCCCEEEEccCC--CeEEEEECCCCCEEEEEECCceecCCeeEECCCC-cEEEEeCc
Confidence 011 11111 112234444446677665333 58999998667653333333 2234466666664 56665543
No 468
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.77 E-value=0.00016 Score=70.10 Aligned_cols=145 Identities=13% Similarity=0.067 Sum_probs=85.7
Q ss_pred EEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCc-cccH----------------HHHHHHHhcCeEE
Q psy4818 459 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSI----------------SRCMFLRHFNGIY 521 (734)
Q Consensus 459 ~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~----------------~~~~~l~~~G~~v 521 (734)
.-.+.+....+..+..+++..+. .....|++|+++||||.+... .+.. .-..|.. -..+
T Consensus 21 sGy~~v~~~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~--~anv 96 (255)
T 1whs_A 21 SGYITVDEGAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK--VANV 96 (255)
T ss_dssp EEEEEEETTTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG--TSEE
T ss_pred EEEEECCCCCCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccc--cCCE
Confidence 34455655567778777776543 235689999999999987654 2100 0012322 4778
Q ss_pred EEEecccCCCCCchhhhccc-cccCCCchhHHHHHHHH-HHHcCCCCCCcEEEEEcChHHHHHHHHHhc----C-C-Cce
Q psy4818 522 AIPNIRGGGELGEDWHNAGR-LLKKQNCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACLNQ----R-P-ELY 593 (734)
Q Consensus 522 ~~~~~rG~~~~g~~~~~~~~-~~~~~~~~~D~~~~~~~-l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~----~-p-~~~ 593 (734)
+.+|.+-|.||...-..... ........+|+...++. +..........+.|+|.||||..+..++.. . + =.+
T Consensus 97 lfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 97 LFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 99997655555422111110 00111234455554443 333333445679999999999998877642 1 2 257
Q ss_pred eEEEEcCCcchhcc
Q psy4818 594 GAALILVGALDMLR 607 (734)
Q Consensus 594 ~a~v~~~~~~d~~~ 607 (734)
+++++..|++|...
T Consensus 177 kGi~ign~~~d~~~ 190 (255)
T 1whs_A 177 KGFMVGNGLIDDYH 190 (255)
T ss_dssp EEEEEEEECCBHHH
T ss_pred ceEEecCCccCHHH
Confidence 99999999988653
No 469
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.76 E-value=0.0032 Score=64.37 Aligned_cols=240 Identities=12% Similarity=0.084 Sum_probs=125.1
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--------------------cccccCeeEEEcCCcEEEE
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------------KNVKFPSISWTHDHKGFFY 204 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--------------------~~~~~~~~~wSpDg~~l~y 204 (734)
.+++|+|||+.+ |+...+ ..|+.+|..+++...... ......++++.+++..|+.
T Consensus 22 ~~i~~d~~g~~l-~v~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 22 NSFTFDSTNKGF-YTSVQD----GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCEECCTTCSSE-EEECTT----SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEE-EEEcCC----CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 468899998844 333222 358888888765321100 0012346788874445665
Q ss_pred EEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCC--CeeEEEEEEec-CCcEEEEEEecC----------
Q psy4818 205 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSEVTD-CGRYLLVSTSNN---------- 271 (734)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~--~~~~~~~~~Sp-DG~~l~~~~~~~---------- 271 (734)
+... ..|++++..++.. ..+...... .....++.+.+ ||+ |++.....
T Consensus 97 ~d~~----------------~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 97 VDCY----------------YHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp EETT----------------TEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHH
T ss_pred EECC----------------CCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCE-EEEECCccccccccccee
Confidence 5321 1466666554321 112111111 11345688999 886 44443221
Q ss_pred ----CCCceEEEEeCCCCCCCcccCCCCceeeeccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEe
Q psy4818 272 ----TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 346 (734)
Q Consensus 272 ----~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 346 (734)
.....|+++|.+++ ....+......... .+++||+.||+.... ..+|+++++++......+.+
T Consensus 158 ~~~~~~~g~v~~~d~~~~---------~~~~~~~~~~~p~gia~~~dg~~lyv~d~~---~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTK---------ETTLLLKELHVPGGAEVSADSSFVLVAEFL---SHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHTCCCEEEEEEETTTT---------EEEEEEEEESCCCEEEECTTSSEEEEEEGG---GTEEEEEESSSTTTTCEEEE
T ss_pred hcccCCCceEEEEeCCCC---------EEEEeccCCccCcceEECCCCCEEEEEeCC---CCeEEEEECCCCcCCccceE
Confidence 11257999998762 12222222111122 388999888876432 45799999876422222333
Q ss_pred ecCCCCceeEEEEEeeCCEEEEEEEe--------CCceeEEEEECCCCceeeeeCCCCc----eEEeeccCcccceEEEE
Q psy4818 347 IPEDENRTLDVVAAVANNKLIVHYIQ--------NVRSVMDLHDLNTGKRLHSFPLDLG----QITHISGRRKYNEVFYG 414 (734)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~l~~~dl~~g~~~~~l~~~~g----~v~~~~~~~d~~~l~~~ 414 (734)
.. .+. ...+....++.+++.... .....|+++|. +|+.++.+..+.+ .+..+.. ++++|++.
T Consensus 226 ~~-~~g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~ 299 (322)
T 2fp8_A 226 VK-IPN--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE--HDGLLYIG 299 (322)
T ss_dssp EE-CSS--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE--ETTEEEEE
T ss_pred Ee-CCC--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE--eCCEEEEe
Confidence 22 212 445555554667766544 11357999998 6887776665432 2222222 34566664
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
... ...|.++++
T Consensus 300 ~~~---~~~i~~~~~ 311 (322)
T 2fp8_A 300 TLF---HGSVGILVY 311 (322)
T ss_dssp CSS---CSEEEEEEC
T ss_pred ecC---CCceEEEec
Confidence 321 246777777
No 470
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.75 E-value=0.00012 Score=79.09 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=74.7
Q ss_pred CCCCcEEEEecCCCCCcCC-ccccHHHHHHHHhcCeEEEEEecccCCCCCchhhh--cc------ccccCCCchhHHHHH
Q psy4818 485 NRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN--AG------RLLKKQNCFDDFQAA 555 (734)
Q Consensus 485 ~~~~P~vv~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~~~~g~~~~~--~~------~~~~~~~~~~D~~~~ 555 (734)
.+..|++|++ ||-+.... ..-...+..+..+.|..+++...|- ||++.-- .. +-..-...+.|+...
T Consensus 40 ~~~gPIfl~~-gGEg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~f 115 (472)
T 4ebb_A 40 RGEGPIFFYT-GNEGDVWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAEL 115 (472)
T ss_dssp TTTCCEEEEE-CCSSCHHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHHH
T ss_pred CCCCcEEEEE-CCCccccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHHH
Confidence 3457888887 44332110 0011223456666799999999998 6655321 10 001122456788888
Q ss_pred HHHHHHcCCCCCCcEEEEEcChHHHHHHHHHhcCCCceeEEEEcCC
Q psy4818 556 AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 601 (734)
Q Consensus 556 ~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 601 (734)
++++....-....+++++|+||||.|++++-.++|++|.++++.++
T Consensus 116 i~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSA 161 (472)
T 4ebb_A 116 LRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASA 161 (472)
T ss_dssp HHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEeccc
Confidence 8888665434456899999999999999999999999988887654
No 471
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.71 E-value=0.0078 Score=58.67 Aligned_cols=203 Identities=11% Similarity=0.041 Sum_probs=117.5
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-cc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.+++++|.||++.|+.+.+.. ..|+.+|++ |+.+... .. ..+..++++.+||+ ++++..
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~--~~vs~E------------ 88 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ--FVISDE------------ 88 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE--EEEEET------------
T ss_pred CcceeEEeCCCCEEEEEECCC----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE--EEEEEC------------
Confidence 389999999999887777653 579999998 7654422 22 23446889988874 334432
Q ss_pred ccCCcEEEEEECCCCCC-CCeeEEe-----cCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCC
Q psy4818 221 AHMGQKIYYHVLGTEQD-KDIPVVE-----FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 294 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~-~~~~v~~-----~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 294 (734)
+..++++..++.... ..+.... .+.+. -+.+++|+|+++.|++...+. ...||.++-- ... .
T Consensus 89 --~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~-g~EGLA~d~~~~~L~va~E~~--p~~i~~~~g~--~~~-----~ 156 (255)
T 3qqz_A 89 --RDYAIYVISLTPNSEVKILKKIKIPLQESPTNC-GFEGLAYSRQDHTFWFFKEKN--PIEVYKVNGL--LSS-----N 156 (255)
T ss_dssp --TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSS-CCEEEEEETTTTEEEEEEESS--SEEEEEEEST--TCS-----S
T ss_pred --CCCcEEEEEcCCCCeeeeeeeeccccccccccC-CcceEEEeCCCCEEEEEECcC--CceEEEEccc--ccC-----C
Confidence 124677777765432 0011111 11122 246899999999988765432 3578888711 000 0
Q ss_pred Cceeee--------ccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC-----CCceeEEEEEe
Q psy4818 295 PLKTVI--------PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-----ENRTLDVVAAV 361 (734)
Q Consensus 295 ~~~~l~--------~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~ 361 (734)
....+. .-.+...-.+.|..+++|+++... ..|+.+|.++.. .....|.+.. .....+++.+.
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s---~~L~~~d~~g~~-~~~~~L~~g~~~l~~~~~qpEGia~d 232 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES---RALQEVTLVGEV-IGEMSLTKGSRGLSHNIKQAEGVAMD 232 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT---TEEEEECTTCCE-EEEEECSTTGGGCSSCCCSEEEEEEC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC---CeEEEEcCCCCE-EEEEEcCCccCCcccccCCCCeeEEC
Confidence 111110 001111123778888999998863 569999987642 1122233221 01245778777
Q ss_pred eCCEEEEEEEeCCceeEEEEEC
Q psy4818 362 ANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 362 ~~~~l~~~~~~~~~~~l~~~dl 383 (734)
+++.+|++... +.+|++..
T Consensus 233 ~~G~lyIvsE~---n~~y~f~~ 251 (255)
T 3qqz_A 233 ASGNIYIVSEP---NRFYRFTP 251 (255)
T ss_dssp TTCCEEEEETT---TEEEEEEC
T ss_pred CCCCEEEEcCC---ceEEEEEe
Confidence 76788877433 47888865
No 472
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.69 E-value=0.0019 Score=63.72 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=103.2
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
..+++++|||+ |.++ +.. ..|+++|..++......... ....+++++|||+ |+++...
T Consensus 69 p~~i~~~~~g~-l~v~-~~~----~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~-------------- 127 (270)
T 1rwi_B 69 PQGLAVDGAGT-VYVT-DFN----NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG-------------- 127 (270)
T ss_dssp CCCEEECTTCC-EEEE-ETT----TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGG--------------
T ss_pred cceeEECCCCC-EEEE-cCC----CEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEECC--------------
Confidence 45789999998 4433 332 36999998876543222111 2235788999997 5544321
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 302 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~ 302 (734)
...|++++.++... ..... .......++++++||+ |++... ....|++++.+++.. .......
T Consensus 128 -~~~i~~~~~~~~~~---~~~~~-~~~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~~~~~--------~~~~~~~ 190 (270)
T 1rwi_B 128 -NNRVVKLAAGSKTQ---TVLPF-TGLNDPDGVAVDNSGN-VYVTDT---DNNRVVKLEAESNNQ--------VVLPFTD 190 (270)
T ss_dssp -GTEEEEECTTCCSC---EECCC-CSCCSCCCEEECTTCC-EEEEEG---GGTEEEEECTTTCCE--------EECCCSS
T ss_pred -CCEEEEEECCCcee---Eeecc-ccCCCceeEEEeCCCC-EEEEEC---CCCEEEEEecCCCce--------EeecccC
Confidence 23677776554321 11111 1111234688999998 444332 225899999876210 0001111
Q ss_pred ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEE
Q psy4818 303 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 381 (734)
Q Consensus 303 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 381 (734)
...... .++++| .+|+.... ...|++++.++.. ...+..........+.+..++.++++...+ ..|.++
T Consensus 191 ~~~p~~i~~d~~g-~l~v~~~~---~~~v~~~~~~~~~----~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~--~~v~~~ 260 (270)
T 1rwi_B 191 ITAPWGIAVDEAG-TVYVTEHN---TNQVVKLLAGSTT----STVLPFTGLNTPLAVAVDSDRTVYVADRGN--DRVVKL 260 (270)
T ss_dssp CCSEEEEEECTTC-CEEEEETT---TSCEEEECTTCSC----CEECCCCSCSCEEEEEECTTCCEEEEEGGG--TEEEEE
T ss_pred CCCceEEEECCCC-CEEEEECC---CCcEEEEcCCCCc----ceeeccCCCCCceeEEECCCCCEEEEECCC--CEEEEE
Confidence 111122 266776 67766543 3459999987643 222222211334455554445676665433 578888
Q ss_pred ECC
Q psy4818 382 DLN 384 (734)
Q Consensus 382 dl~ 384 (734)
++.
T Consensus 261 ~~~ 263 (270)
T 1rwi_B 261 TSL 263 (270)
T ss_dssp CCC
T ss_pred cCC
Confidence 774
No 473
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.69 E-value=0.015 Score=58.08 Aligned_cols=231 Identities=12% Similarity=0.070 Sum_probs=125.0
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.+.++.++|||+. .++. ..+ ..|+++|.. ++...... ......++++++||+ |+++...
T Consensus 16 ~~~~i~~d~~g~l-~v~~-~~~---~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------ 76 (299)
T 2z2n_A 16 GPYGITVSDKGKV-WITQ-HKA---NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENA------------ 76 (299)
T ss_dssp CEEEEEECTTSCE-EEEE-TTT---TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETT------------
T ss_pred CccceEECCCCCE-EEEe-cCC---CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCC------------
Confidence 3678899999984 3333 222 268999988 65432111 112235788889886 5555421
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
...|++++... ....+..+.......++.+++||+. ++... ....|+++|.++ . .....
T Consensus 77 ---~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~---~~~~i~~~d~~g-~---------~~~~~ 135 (299)
T 2z2n_A 77 ---ANKIGRITKKG----IIKEYTLPNPDSAPYGITEGPNGDI-WFTEM---NGNRIGRITDDG-K---------IREYE 135 (299)
T ss_dssp ---TTEEEEECTTS----CEEEEECSSTTCCEEEEEECTTSCE-EEEET---TTTEEEEECTTC-C---------EEEEE
T ss_pred ---CCeEEEECCCC----cEEEEeCCCcCCCceeeEECCCCCE-EEEec---CCceEEEECCCC-C---------EEEec
Confidence 22577777542 1222332222224567889999974 33321 235789998833 1 11111
Q ss_pred -c-cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 301 -P-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 301 -~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
. ....... .++++| .+|+.... ...|++++. ++. +..+...........+.+..++.+++.... ...
T Consensus 136 ~~~~~~~~~~i~~~~~g-~l~v~~~~---~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~ 205 (299)
T 2z2n_A 136 LPNKGSYPSFITLGSDN-ALWFTENQ---NNAIGRITE-SGD---ITEFKIPTPASGPVGITKGNDDALWFVEII--GNK 205 (299)
T ss_dssp CSSTTCCEEEEEECTTS-CEEEEETT---TTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETT--TTE
T ss_pred CCCCCCCCceEEEcCCC-CEEEEeCC---CCEEEEEcC-CCc---EEEeeCCCCCCcceeEEECCCCCEEEEccC--Cce
Confidence 1 1111122 256666 46665542 346999998 443 333311211233445555444667665432 357
Q ss_pred EEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|++++. +|+.. .+..+ ...+.++..++++. +++.... ...++++|.
T Consensus 206 i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~d~ 253 (299)
T 2z2n_A 206 IGRITT-SGEIT-EFKIPTPNARPHAITAGAGID-LWFTEWG---ANKIGRLTS 253 (299)
T ss_dssp EEEECT-TCCEE-EEECSSTTCCEEEEEECSTTC-EEEEETT---TTEEEEEET
T ss_pred EEEECC-CCcEE-EEECCCCCCCceeEEECCCCC-EEEeccC---CceEEEECC
Confidence 999999 77753 33222 34455677777764 6665422 347889987
No 474
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.60 E-value=0.026 Score=64.72 Aligned_cols=186 Identities=9% Similarity=-0.001 Sum_probs=106.6
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCC--CCeeEEecC
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD--KDIPVVEFP 246 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~--~~~~v~~~~ 246 (734)
.|+.+++.++.............+++|.+.+..||++... ..+|++.++.+... ....+....
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~---------------~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS---------------QRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp SEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT---------------TTEEEEEEC--------CEEEECSS
T ss_pred ceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecc---------------ceeEEEEeccCCCCCcceeEEEecC
Confidence 4778888776543222222223578999988888877532 23788888875321 222333311
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceEE-EEEecCCeEEEEeCCC
Q psy4818 247 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKN 324 (734)
Q Consensus 247 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~ 324 (734)
.....++++.+.++.|+++.. ....|+++++++. ....++. ....-.. .+.|.++.|||.-.
T Consensus 470 --l~~P~GLAvD~~~~~LY~tD~---~~~~I~v~~ldG~---------~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~-- 533 (791)
T 3m0c_C 470 --IQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDW-- 533 (791)
T ss_dssp --CSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEEC--
T ss_pred --CCCcceeeeeecCCcEEEEec---CCCeEEEEeCCCC---------eEEEEEeCCCCCcceEEEecCCCCEEEecC--
Confidence 112246889999999887643 2368999999872 1233332 2221222 37787788887643
Q ss_pred CCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeee
Q psy4818 325 APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 392 (734)
Q Consensus 325 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l 392 (734)
+...+|.++++++.. .+.++... -....++.+. .++.||++- .....|+++++ +|...+.+
T Consensus 534 g~~~~I~~~~~dG~~---~~~lv~~~-l~~P~GLavD~~~~~LYwaD--~~~~~I~~~d~-dG~~~~~v 595 (791)
T 3m0c_C 534 GTPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVD--SKLHSISSIDV-NGGNRKTI 595 (791)
T ss_dssp SSSCEEEEEETTSCC---EEEEECSS-CSCEEEEEEETTTTEEEEEE--TTTTEEEEEET-TSCSCEEE
T ss_pred CCCCeEEEEecCCCc---eEEEEeCC-CCCceEEEEecCCCeEEEEe--CCCCcEEEEec-CCCceEEE
Confidence 223579999998765 24444433 2233455554 457888764 33468999999 56544443
No 475
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.59 E-value=0.00014 Score=77.64 Aligned_cols=141 Identities=11% Similarity=0.127 Sum_probs=81.0
Q ss_pred ceEEEEEEEcCCCcEEeEEEEEeccccCCCCCcEEEEecCCCCCcCCccccHH----------------HHHHHHhcCeE
Q psy4818 457 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS----------------RCMFLRHFNGI 520 (734)
Q Consensus 457 ~~~~~~~~~s~dg~~i~~~~~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~----------------~~~~l~~~G~~ 520 (734)
+....-.++..++..+..+++..++ .....|+||++|||||.+....+... -..| . +-..
T Consensus 19 ~~~~sGyv~v~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw-~-~~~~ 94 (452)
T 1ivy_A 19 FRQYSGYLKSSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSW-N-LIAN 94 (452)
T ss_dssp SCEEEEEEECSTTEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCG-G-GSSE
T ss_pred ceeeEEEEeeCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcc-c-cccc
Confidence 4444444555566777777665433 12468999999999998643211000 0112 2 2577
Q ss_pred EEEEecccCCCCCchhhhccccccCC---CchhHHHH-HHHHHHHcCCCCCCcEEEEEcChHHHHHHHHHh----cCCCc
Q psy4818 521 YAIPNIRGGGELGEDWHNAGRLLKKQ---NCFDDFQA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACLN----QRPEL 592 (734)
Q Consensus 521 v~~~~~rG~~~~g~~~~~~~~~~~~~---~~~~D~~~-~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~----~~p~~ 592 (734)
++.+|.+-|.||... .. ..... ...+|+.. ..+|+.........++.|+|.||||..+..++. ..+-.
T Consensus 95 ~lfiDqP~GtGfS~~--~~--~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~ 170 (452)
T 1ivy_A 95 VLYLESPAGVGFSYS--DD--KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMN 170 (452)
T ss_dssp EEEECCSTTSTTCEE--SS--CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSC
T ss_pred EEEEecCCCCCcCCc--CC--CCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccc
Confidence 999996444445421 11 11111 12334433 344444432344568999999999995555443 33456
Q ss_pred eeEEEEcCCcchh
Q psy4818 593 YGAALILVGALDM 605 (734)
Q Consensus 593 ~~a~v~~~~~~d~ 605 (734)
++++++..|++|.
T Consensus 171 l~g~~ign~~~d~ 183 (452)
T 1ivy_A 171 LQGLAVGNGLSSY 183 (452)
T ss_dssp EEEEEEESCCSBH
T ss_pred cceEEecCCccCh
Confidence 8999999998764
No 476
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.58 E-value=0.0066 Score=58.93 Aligned_cols=191 Identities=8% Similarity=-0.007 Sum_probs=113.1
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
.++.|+ ++.||.+... ..+|..+++.+++..... . +. ..| +...+++|+.|+....
T Consensus 58 qGL~~~--~~~Ly~stG~---------------~g~v~~iD~~Tgkv~~~~-l--~~-~~F--geGit~~g~~Ly~ltw- 113 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGH---------------QGTLRQLSLESAQPVWME-R--LG-NIF--AEGLASDGERLYQLTW- 113 (268)
T ss_dssp EEEEEE--TTEEEEEETT---------------TTEEEECCSSCSSCSEEE-E--CT-TCC--EEEEEECSSCEEEEES-
T ss_pred ceEEEE--CCEEEEEcCC---------------CCEEEEEECCCCcEEeEE-C--CC-Ccc--eeEEEEeCCEEEEEEc-
Confidence 366775 5677666532 124888888887654433 2 22 212 3346678888876543
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 350 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 350 (734)
..+.++++|.+++. ...-+.-...++. +++||++||. ++ + ..+|+.+|.++.+. ...+.-..
T Consensus 114 --~~~~v~V~D~~Tl~---------~~~ti~~~~eGwG-Lt~Dg~~L~v-Sd--G-s~~l~~iDp~T~~v--~~~I~V~~ 175 (268)
T 3nok_A 114 --TEGLLFTWSGMPPQ---------RERTTRYSGEGWG-LCYWNGKLVR-SD--G-GTMLTFHEPDGFAL--VGAVQVKL 175 (268)
T ss_dssp --SSCEEEEEETTTTE---------EEEEEECSSCCCC-EEEETTEEEE-EC--S-SSEEEEECTTTCCE--EEEEECEE
T ss_pred --cCCEEEEEECCcCc---------EEEEEeCCCceeE-EecCCCEEEE-EC--C-CCEEEEEcCCCCeE--EEEEEeCC
Confidence 23789999998831 1111111112222 6688987775 44 2 45799999887542 12221111
Q ss_pred CC---ceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-------------CceEEeeccCcccceEEEE
Q psy4818 351 EN---RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------LGQITHISGRRKYNEVFYG 414 (734)
Q Consensus 351 ~~---~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-------------~g~v~~~~~~~d~~~l~~~ 414 (734)
.. ..+..+.+.+ +.+++..-. ...|.++|+++|+.+..|... .....+++.++++++++++
T Consensus 176 ~g~~v~~lNeLe~~d-G~lyanvw~--s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 176 RGQPVELINELECAN-GVIYANIWH--SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp TTEECCCEEEEEEET-TEEEEEETT--CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCcccccccccEEeC-CEEEEEECC--CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 11 1233455555 677755422 358999999999987777542 1245678888888888887
Q ss_pred EecCCCCceEEEEeC
Q psy4818 415 FTSFLQPGTIYHCNI 429 (734)
Q Consensus 415 ~ss~~~P~~~~~~d~ 429 (734)
---+ +.+|.+.+
T Consensus 253 GK~W---p~~~ev~~ 264 (268)
T 3nok_A 253 GKLW---PRLFEVRL 264 (268)
T ss_dssp ETTC---SEEEEEEE
T ss_pred CCCC---CceEEEEE
Confidence 6555 35776654
No 477
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.58 E-value=0.0073 Score=61.32 Aligned_cols=181 Identities=10% Similarity=0.080 Sum_probs=94.8
Q ss_pred EEEEEEECC-CCCcccc-cccccccCeeEEEc---CCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeE
Q psy4818 168 NTLHIKDVD-TGKDYPE-VLKNVKFPSISWTH---DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV 242 (734)
Q Consensus 168 ~~l~v~dl~-~g~~~~~-~~~~~~~~~~~wSp---Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v 242 (734)
..|.+|++. +|+.+.. .........++||| |++.|+-.+.|. .|.+|++.+++. +..
T Consensus 157 ~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~----------------TIkIWDl~TGk~--l~t 218 (356)
T 2w18_A 157 QQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMN----------------NIVIWNLKTGQL--LKK 218 (356)
T ss_dssp CEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTS----------------EEEEEETTTCCE--EEE
T ss_pred CcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCC----------------cEEEEECCCCcE--EEE
Confidence 579999984 4664331 12222336788999 667777666433 799999988752 223
Q ss_pred EecCC-CCeeEEEEEEecCCcEEEEEEe--------cCCCCceEEEEeCCCCCCCcccCCCCceeee----ccccceEEE
Q psy4818 243 VEFPN-GRSLGLHSEVTDCGRYLLVSTS--------NNTQGSDLHYFDLHSLPDGKISGKFPLKTVI----PGMDHHHEI 309 (734)
Q Consensus 243 ~~~~~-~~~~~~~~~~SpDG~~l~~~~~--------~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~----~~~~~~~~~ 309 (734)
+.... ........+|||||+.++.... .+.....|.+||..++. ....+. .+.......
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk--------~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL--------SVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE--------EEEEEEECCCTTCCCCEEE
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE--------EEEEEEeeccCCCcceeEc
Confidence 33211 1112345689999999875432 12223678888887731 111110 011111111
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
.+.++..++-.+. +..|.+||+.+++ ....+.+....++..+.+..++..+++...| ..|++||+
T Consensus 291 g~~sg~~lASgS~----DgTIkIWDl~tGk---~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D--~TIklWd~ 355 (356)
T 2w18_A 291 GDVKDHCAAAILT----SGTIAIWDLLLGQ---CTALLPPVSDQHWSFVKWSGTDSHLLAGQKD--GNIFVYHY 355 (356)
T ss_dssp EEEETTEEEEEET----TSCEEEEETTTCS---EEEEECCC--CCCCEEEECSSSSEEEEECTT--SCEEEEEE
T ss_pred cccCCCEEEEEcC----CCcEEEEECCCCc---EEEEecCCCCCeEEEEEECCCCCEEEEEECC--CcEEEecC
Confidence 1222333332222 3469999998876 2333332223344444454446777777666 46778874
No 478
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.013 Score=62.37 Aligned_cols=159 Identities=10% Similarity=0.097 Sum_probs=88.6
Q ss_pred EeeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCccccc
Q psy4818 144 LKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 222 (734)
Q Consensus 144 ~~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~ 222 (734)
-.+++++| ++..| |..+.. ..|+++|+++++............+++|++||+.||.+..... .
T Consensus 139 P~~lavdp~~~g~L-yv~d~~----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~-----------~ 202 (430)
T 3tc9_A 139 AVWLSFDPKNHNHL-YLVGEQ----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN-----------N 202 (430)
T ss_dssp CCEEEEETTEEEEE-EEEEBT----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC-----------T
T ss_pred CCEEEECCCCCCeE-EEEeCC----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC-----------c
Confidence 45789999 45554 455543 6799999998764332222223367999999997777653210 1
Q ss_pred CCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-
Q psy4818 223 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP- 301 (734)
Q Consensus 223 ~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~- 301 (734)
....++........... ..+.....+ .+++++|++.+|++... ...+|++++.+++. ...+..
T Consensus 203 ~~~~v~~~~~~g~~~~~-~~l~~~~~p---~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~---------~~~~~~~ 266 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVI-TELTKGQNC---NGAETHPINGELYFNSW---NAGQVFRYDFTTQE---------TTPLFTI 266 (430)
T ss_dssp TSEEEEEEEGGGTSCSE-EEEEECSSC---CCEEECTTTCCEEEEET---TTTEEEEEETTTTE---------EEEEEEC
T ss_pred ccceEEEEeCCCceeee-eeeccCCCc---eEEEEeCCCCEEEEEEC---CCCEEEEEECCCCc---------EEEEEEc
Confidence 11234444433322111 112111222 35789996556666532 23689999998621 111111
Q ss_pred -cc-cceEEEEEecCCeEEEEeCCCCCCceEEEEecCC
Q psy4818 302 -GM-DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 337 (734)
Q Consensus 302 -~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 337 (734)
.. ....-.++|+|++||+.... +.+|++++.++
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~~---~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVVN---QHYILRSDYDW 301 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETT---TTEEEEEEEET
T ss_pred CCCCcceeEEEcCCCCEEEEEECC---CCEEEEEeCCc
Confidence 11 11222489999988876543 45788887764
No 479
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.56 E-value=0.0015 Score=69.97 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=76.8
Q ss_pred EEEeeEEeCCC-CcEEEEEEeCCCCceEEEEEEECCCCCccccccc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 142 TALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 142 ~~~~~~~~SPD-G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
..+..++|+|+ ++.||-... + ..|++||+.++..+..... ...+..++|||||+.|+....+.
T Consensus 150 ~~V~~v~~~p~~~~~las~s~-D----g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg---------- 214 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLA-D----GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG---------- 214 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEET-T----SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS----------
T ss_pred CceEEEEECCCCCCEEEEEEC-C----CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC----------
Confidence 45889999998 677765443 3 3599999998854322221 22346899999999988776432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecC-----CCCeeEEEEEEecCCcEEEEEEecCCC---CceEEEEeCCC
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFP-----NGRSLGLHSEVTDCGRYLLVSTSNNTQ---GSDLHYFDLHS 284 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~-----~~~~~~~~~~~SpDG~~l~~~~~~~~~---~~~i~~~d~~~ 284 (734)
.|+++++. +. ....+..+ ++......+.|++++.+++......+. ...++++++..
T Consensus 215 ------~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 215 ------TVVQYLPT-LQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp ------CEEEECTT-CC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred ------cEEEEccC-Cc--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 57778776 21 11122111 122366789999999998766544321 24688888876
No 480
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.56 E-value=0.022 Score=55.29 Aligned_cols=192 Identities=16% Similarity=0.205 Sum_probs=107.1
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.++ || .|..+....| ...|.++|+++|+.+....-.....+..-+++|++||...- .
T Consensus 45 tqGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw---------------~ 105 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW---------------K 105 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES---------------S
T ss_pred cceEEEE-CC-EEEEECCCCC--CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe---------------e
Confidence 4577888 65 5655554443 37899999999997543322222234446678888876642 2
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec--
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-- 301 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-- 301 (734)
...+++++..+.... .-+.-+. .+...++||+.|+.+. + .+.|+.+|.++.. ....+..
T Consensus 106 ~~~v~v~D~~t~~~~--~ti~~~~-----eG~glt~dg~~L~~Sd--G--s~~i~~iDp~T~~--------v~~~I~V~~ 166 (262)
T 3nol_A 106 NGLGFVWNIRNLRQV--RSFNYDG-----EGWGLTHNDQYLIMSD--G--TPVLRFLDPESLT--------PVRTITVTA 166 (262)
T ss_dssp SSEEEEEETTTCCEE--EEEECSS-----CCCCEEECSSCEEECC--S--SSEEEEECTTTCS--------EEEEEECEE
T ss_pred CCEEEEEECccCcEE--EEEECCC-----CceEEecCCCEEEEEC--C--CCeEEEEcCCCCe--------EEEEEEecc
Confidence 347999998876422 2222221 1245678999887642 2 3689999998831 1111111
Q ss_pred -ccc-ceE-EE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecC-----------CCCceeEEEEEeeC-CE
Q psy4818 302 -GMD-HHH-EI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-----------DENRTLDVVAAVAN-NK 365 (734)
Q Consensus 302 -~~~-~~~-~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~-~~ 365 (734)
+.. ... .. |. +| +||..... ...|+++|.++++ +...+.- ....++.++.+..+ ++
T Consensus 167 ~g~~~~~lNELe~~-~G-~lyan~w~---~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 167 HGEELPELNELEWV-DG-EIFANVWQ---TNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp TTEECCCEEEEEEE-TT-EEEEEETT---SSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred CCccccccceeEEE-CC-EEEEEEcc---CCeEEEEECCCCc---EEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 111 111 11 43 44 67754433 3469999998876 2222221 11346677766543 45
Q ss_pred EEEEEEeCCceeEEEEEC
Q psy4818 366 LIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 366 l~~~~~~~~~~~l~~~dl 383 (734)
++++. . .-+.+|.+.+
T Consensus 239 lfVTG-K-~Wp~~~ev~~ 254 (262)
T 3nol_A 239 LFVTG-K-LWPKVFEITL 254 (262)
T ss_dssp EEEEE-T-TCSEEEEEEE
T ss_pred EEEEC-C-CCCceEEEEE
Confidence 55543 2 2356666544
No 481
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.55 E-value=0.037 Score=55.03 Aligned_cols=233 Identities=10% Similarity=0.009 Sum_probs=123.8
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc--ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~--~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
..++.+++||+ |.++.... ..|.++|.. ++....... .....++++++||+ |+++..
T Consensus 22 p~~i~~d~~g~-l~v~~~~~----~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 80 (300)
T 2qc5_A 22 PYGITSSEDGK-VWFTQHKA----NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTEN-------------- 80 (300)
T ss_dssp EEEEEECTTSC-EEEEETTT----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred cceeeECCCCC-EEEEcCCC----CeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEec--------------
Confidence 56788999998 33333222 368889987 654321111 12235778888885 555432
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
....|++++.. +. ...+..+.......++.++++|+.. +... ....|+.++.++ .... ..+..
T Consensus 81 -~~~~v~~~d~~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~---~~~~i~~~~~~g-~~~~-------~~~~~ 143 (300)
T 2qc5_A 81 -GANKIGKLSKK-GG---FTEYPLPQPDSGPYGITEGLNGDIW-FTQL---NGDRIGKLTADG-TIYE-------YDLPN 143 (300)
T ss_dssp -TTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECSTTCEE-EEET---TTTEEEEECTTS-CEEE-------EECSS
T ss_pred -CCCeEEEECCC-CC---eEEecCCCCCCCCccceECCCCCEE-EEcc---CCCeEEEECCCC-CEEE-------ccCCC
Confidence 12367777765 22 1223322222345678889999743 3321 225788888763 2110 00111
Q ss_pred cccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCceeEEE
Q psy4818 302 GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 380 (734)
Q Consensus 302 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 380 (734)
....... .++++|+ +|+.... ...|++++.+ +. +..+...........+....++.+++.... ...|++
T Consensus 144 ~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~--~~~i~~ 213 (300)
T 2qc5_A 144 KGSYPAFITLGSDNA-LWFTENQ---NNSIGRITNT-GK---LEEYPLPTNAAAPVGITSGNDGALWFVEIM--GNKIGR 213 (300)
T ss_dssp TTCCEEEEEECTTSS-EEEEETT---TTEEEEECTT-CC---EEEEECSSTTCCEEEEEECTTSSEEEEETT--TTEEEE
T ss_pred CCCCceeEEECCCCC-EEEEecC---CCeEEEECCC-Cc---EEEeeCCCCCCCcceEEECCCCCEEEEccC--CCEEEE
Confidence 1111122 2667776 6665542 3469999983 33 233322221233445555544677765533 247999
Q ss_pred EECCCCceeee-eCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 381 HDLNTGKRLHS-FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 381 ~dl~~g~~~~~-l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++. +|+.... +......+.++..++++. +++.... ...++++|.
T Consensus 214 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~ 258 (300)
T 2qc5_A 214 ITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEWG---ANQIGRITN 258 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETT---TTEEEEECT
T ss_pred EcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEeccC---CCeEEEECC
Confidence 998 6765332 222233455677777764 6665432 347899987
No 482
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.54 E-value=0.016 Score=55.69 Aligned_cols=196 Identities=11% Similarity=0.093 Sum_probs=114.1
Q ss_pred CeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy4818 191 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 270 (734)
Q Consensus 191 ~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 270 (734)
.++.|++ ..||.+.-. .....|..+++.++.... -...+... + +...+++|+.|+....
T Consensus 24 qGL~~~~--~~LyestG~-------------~g~S~v~~vD~~tgkv~~--~~~l~~~~-f--geGi~~~~~~ly~ltw- 82 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGE-------------TGRSSVRKVDLETGRILQ--RAEVPPPY-F--GAGIVAWRDRLIQLTW- 82 (243)
T ss_dssp EEEEEET--TEEEEEECC-------------TTSCEEEEEETTTCCEEE--EEECCTTC-C--EEEEEEETTEEEEEES-
T ss_pred ccEEEEC--CEEEEECCC-------------CCCceEEEEECCCCCEEE--EEeCCCCc-c--eeEEEEeCCEEEEEEe-
Confidence 4678864 466655431 224579999998875321 12222221 2 3455667888876643
Q ss_pred CCCCceEEEEeCCCCCCCcccCCCCceeeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCC
Q psy4818 271 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 350 (734)
Q Consensus 271 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 350 (734)
..+.++++|.+++ ....-+.-...++. +++|+++||+ ++ + ..+|+.+|.++.+...-..+....
T Consensus 83 --~~~~v~v~D~~tl---------~~~~ti~~~~~Gwg-lt~dg~~L~v-Sd--g-s~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 83 --RNHEGFVYDLATL---------TPRARFRYPGEGWA-LTSDDSHLYM-SD--G-TAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp --SSSEEEEEETTTT---------EEEEEEECSSCCCE-EEECSSCEEE-EC--S-SSEEEEECTTTCCEEEEEECEETT
T ss_pred --eCCEEEEEECCcC---------cEEEEEeCCCCceE-EeeCCCEEEE-EC--C-CCeEEEEeCCCCeEEEEEEEccCC
Confidence 2378999999882 11111211122333 5688887775 45 2 456999999875421001121111
Q ss_pred -CCceeEEEEEeeCCEEEEEEEeCCceeEEEEECCCCceeeeeCCC-------------CceEEeeccCcccceEEEEEe
Q psy4818 351 -ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------LGQITHISGRRKYNEVFYGFT 416 (734)
Q Consensus 351 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~-------------~g~v~~~~~~~d~~~l~~~~s 416 (734)
+-..+..+.+.+ +.+++..- ....|.++|+++|+.+..|... .....+++.++++++++++.-
T Consensus 147 ~~~~~lNeLe~~~-G~lyanvw--~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 147 RPLDNLNELEWVN-GELLANVW--LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EECCCEEEEEEET-TEEEEEET--TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccccceeeEEeC-CEEEEEEC--CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 112233344454 77775542 2358999999999987776522 124467888888888888766
Q ss_pred cCCCCceEEEEeC
Q psy4818 417 SFLQPGTIYHCNI 429 (734)
Q Consensus 417 s~~~P~~~~~~d~ 429 (734)
-+ +.+|.+.+
T Consensus 224 ~w---p~~~~v~~ 233 (243)
T 3mbr_X 224 RW---PMLYEIRL 233 (243)
T ss_dssp TC---SEEEEEEE
T ss_pred CC---CcEEEEEE
Confidence 55 46787776
No 483
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.52 E-value=0.0069 Score=59.06 Aligned_cols=203 Identities=13% Similarity=0.122 Sum_probs=110.4
Q ss_pred cCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy4818 190 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 269 (734)
Q Consensus 190 ~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~ 269 (734)
.++++|.||+++||.+.+. +.+|+..++. +.......+.. ..-..++++.++|++++ . .
T Consensus 29 lSGla~~~~~~~L~aV~d~---------------~~~I~~ld~~-g~v~~~i~l~g---~~D~EGIa~~~~g~~~v-s-~ 87 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK---------------PAAIVEMTTN-GDLIRTIPLDF---VKDLETIEYIGDNQFVI-S-D 87 (255)
T ss_dssp EEEEEEETTTTEEEEEEET---------------TEEEEEEETT-CCEEEEEECSS---CSSEEEEEECSTTEEEE-E-E
T ss_pred cceeEEeCCCCEEEEEECC---------------CCeEEEEeCC-CCEEEEEecCC---CCChHHeEEeCCCEEEE-E-E
Confidence 4799999999988887753 3478888876 32111111111 12346788999997543 2 2
Q ss_pred cCCCCceEEEEeCCCCCCCcccCCCCceee-eccccceEE--EEEecCCeEEEEeCCCCCCceEEEEec--CCCCCCCce
Q psy4818 270 NNTQGSDLHYFDLHSLPDGKISGKFPLKTV-IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINL--NNPCEKNWK 344 (734)
Q Consensus 270 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l-~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~--~~~~~~~~~ 344 (734)
+. ...++++++.....-........ .+ ....+.+.. .|++++++||+...+. ...||.++- .+. ..+
T Consensus 88 E~--~~~l~~~~v~~~~~i~~~~~~~~-~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~g~~~~~---~l~ 159 (255)
T 3qqz_A 88 ER--DYAIYVISLTPNSEVKILKKIKI-PLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVNGLLSSN---ELH 159 (255)
T ss_dssp TT--TTEEEEEEECTTCCEEEEEEEEC-CCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEESTTCSS---CCE
T ss_pred CC--CCcEEEEEcCCCCeeeeeeeecc-ccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEcccccCC---cee
Confidence 22 26788888766211000000000 00 011122223 3889999999877653 346888881 111 122
Q ss_pred Eee-----cCCCCceeEEEEEee-CCEEEEEEEeCCceeEEEEECCCCceeeeeCCCCc---------eEEeeccCcccc
Q psy4818 345 TLI-----PEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLG---------QITHISGRRKYN 409 (734)
Q Consensus 345 ~l~-----~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~~g---------~v~~~~~~~d~~ 409 (734)
.+- ....-..++++.... .+++++..... ..|..+|+ +|+.+..+.+..+ ...+++++++++
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--RALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--TEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCC--CeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 210 001111234444332 35677765433 67888998 6776555544321 346788888874
Q ss_pred eEEEEEecCCCCceEEEEeC
Q psy4818 410 EVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 410 ~l~~~~ss~~~P~~~~~~d~ 429 (734)
+|++ + .|..+|++..
T Consensus 237 -lyIv-s---E~n~~y~f~~ 251 (255)
T 3qqz_A 237 -IYIV-S---EPNRFYRFTP 251 (255)
T ss_dssp -EEEE-E---TTTEEEEEEC
T ss_pred -EEEE-c---CCceEEEEEe
Confidence 7776 3 3558898865
No 484
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.41 E-value=0.099 Score=50.16 Aligned_cols=197 Identities=13% Similarity=0.146 Sum_probs=107.5
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccC
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 223 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~ 223 (734)
..++.|++ ..|..+....|. ..|.++|+++|+.+....-.....+..-++++++||-..- .
T Consensus 23 tqGL~~~~--~~LyestG~~g~--S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw---------------~ 83 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGR--SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW---------------R 83 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTS--CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES---------------S
T ss_pred cccEEEEC--CEEEEECCCCCC--ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe---------------e
Confidence 45777875 456655544443 6899999999997653322222234455677888877642 2
Q ss_pred CcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc
Q psy4818 224 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 303 (734)
Q Consensus 224 ~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~ 303 (734)
...+++++..+.... .-+..+.+ +...++||+.|+++. + .+.|+++|.++.. ....+.-..
T Consensus 84 ~~~v~v~D~~tl~~~--~ti~~~~~-----Gwglt~dg~~L~vSd--g--s~~l~~iDp~t~~--------~~~~I~V~~ 144 (243)
T 3mbr_X 84 NHEGFVYDLATLTPR--ARFRYPGE-----GWALTSDDSHLYMSD--G--TAVIRKLDPDTLQ--------QVGSIKVTA 144 (243)
T ss_dssp SSEEEEEETTTTEEE--EEEECSSC-----CCEEEECSSCEEEEC--S--SSEEEEECTTTCC--------EEEEEECEE
T ss_pred CCEEEEEECCcCcEE--EEEeCCCC-----ceEEeeCCCEEEEEC--C--CCeEEEEeCCCCe--------EEEEEEEcc
Confidence 347999998775421 22222221 245568999887642 2 3689999998831 111111111
Q ss_pred ---c-ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceE---eec------CCCCceeEEEEEee-CCEEEEE
Q psy4818 304 ---D-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT---LIP------EDENRTLDVVAAVA-NNKLIVH 369 (734)
Q Consensus 304 ---~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~---l~~------~~~~~~~~~~~~~~-~~~l~~~ 369 (734)
. ....-....+.++|..... ...|.++|.++++-..+.. +.+ .....++.++.+.. +++++++
T Consensus 145 ~g~~~~~lNeLe~~~G~lyanvw~---s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 145 GGRPLDNLNELEWVNGELLANVWL---TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp TTEECCCEEEEEEETTEEEEEETT---TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred CCcccccceeeEEeCCEEEEEECC---CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 1 0111122234567754432 2369999998876211111 111 11235677777664 3566655
Q ss_pred EEeCCceeEEEEEC
Q psy4818 370 YIQNVRSVMDLHDL 383 (734)
Q Consensus 370 ~~~~~~~~l~~~dl 383 (734)
. . --+.+|.+.+
T Consensus 222 G-K-~wp~~~~v~~ 233 (243)
T 3mbr_X 222 G-K-RWPMLYEIRL 233 (243)
T ss_dssp E-T-TCSEEEEEEE
T ss_pred C-C-CCCcEEEEEE
Confidence 4 2 2366776655
No 485
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.39 E-value=0.0084 Score=59.66 Aligned_cols=213 Identities=13% Similarity=0.074 Sum_probs=107.6
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCccccccc--ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~--~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
...+.++|||+.|+ + . . ..|+.+|. +|+.+..... .....+..++|||+.|+-...+
T Consensus 39 ~~~~~~~pdG~ilv-s-~-~----~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------- 97 (276)
T 3no2_A 39 CNSVAATKAGEILF-S-Y-S----KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------- 97 (276)
T ss_dssp CCEEEECTTSCEEE-E-C-B----SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST-------------
T ss_pred CcCeEECCCCCEEE-e-C-C----CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCC-------------
Confidence 35678999999777 2 1 1 35899998 6775432221 1223567889999876544320
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecC----CCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFP----NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
..+|+.++.... .+.-+... ........+..++||++|+.. .....|+.+|.++ + .-|.
T Consensus 98 --~~~v~~vd~~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~----~~~~~v~~~d~~G-~-------~~w~ 160 (276)
T 3no2_A 98 --PSTILEVNMKGE---VLSKTEFETGIERPHAQFRQINKNKKGNYLVPL----FATSEVREIAPNG-Q-------LLNS 160 (276)
T ss_dssp --TEEEEEECTTSC---EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE----TTTTEEEEECTTS-C-------EEEE
T ss_pred --CCEEEEEeCCCC---EEEEEeccCCCCcccccccCceECCCCCEEEEe----cCCCEEEEECCCC-C-------EEEE
Confidence 113444433211 11011100 000011245778999987632 2236899999874 2 1222
Q ss_pred eeeccccceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCC---ceeEEEEEeeCCEEEEEEEeC-
Q psy4818 298 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN---RTLDVVAAVANNKLIVHYIQN- 373 (734)
Q Consensus 298 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~l~~~~~~~- 373 (734)
.-.. .........++|+.++ .... +.+|+.+|.++++. .|+.-....+. .....+....++.+++.....
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v-~~~~---~~~v~~~d~~tG~~-~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLV-ACGD---AHCFVQLNLESNRI-VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEE-ECBT---TSEEEEECTTTCCE-EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred EECC-CCccceeEcCCCCEEE-EeCC---CCeEEEEeCcCCcE-EEEecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 1111 1111123566776544 3322 35799999986651 12221111111 113344444456777766432
Q ss_pred -------CceeEEEEECCCCceeeeeCCC--CceEEe
Q psy4818 374 -------VRSVMDLHDLNTGKRLHSFPLD--LGQITH 401 (734)
Q Consensus 374 -------~~~~l~~~dl~~g~~~~~l~~~--~g~v~~ 401 (734)
+..+++-++. +|+.+-.+... .+.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~-~g~~~W~~~~~~~~~~~~~ 270 (276)
T 3no2_A 235 DREAGKGKHPQLVEIDS-EGKVVWQLNDKVKFGMIST 270 (276)
T ss_dssp CTTGGGSCCCSEEEECT-TSBEEEEECCTTTSCCCCE
T ss_pred cccccccCCceEEEECC-CCCEEEEecCcccccceee
Confidence 2346777776 78876555432 344433
No 486
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.35 E-value=0.14 Score=50.63 Aligned_cols=229 Identities=11% Similarity=0.052 Sum_probs=121.6
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
.+.++.++|||+. .++.... ..|+++|.+ |+...... ......+++++|||+ |+++...
T Consensus 58 ~~~~i~~~~~g~l-~v~~~~~----~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------ 118 (299)
T 2z2n_A 58 KVMCLTISSDGEV-WFTENAA----NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEMN------------ 118 (299)
T ss_dssp CEEEEEECTTSCE-EEEETTT----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETT------------
T ss_pred ceeeEEECCCCCE-EEeCCCC----CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEecC------------
Confidence 3667899999984 3333222 258888876 44221111 112235778888884 5554421
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee-
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV- 299 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l- 299 (734)
...|++++. ++. ...+..+.......++.+++||+. ++... ....|+++|. ++. ....
T Consensus 119 ---~~~i~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~---~~~~i~~~~~-~g~---------~~~~~ 177 (299)
T 2z2n_A 119 ---GNRIGRITD-DGK---IREYELPNKGSYPSFITLGSDNAL-WFTEN---QNNAIGRITE-SGD---------ITEFK 177 (299)
T ss_dssp ---TTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSCE-EEEET---TTTEEEEECT-TCC---------EEEEE
T ss_pred ---CceEEEECC-CCC---EEEecCCCCCCCCceEEEcCCCCE-EEEeC---CCCEEEEEcC-CCc---------EEEee
Confidence 236777776 322 122222222224567889999964 33321 2258999998 422 1111
Q ss_pred -eccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 300 -IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 300 -~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
......... .++++|. +|+.... ...|++++. ++. +..+........+..+....++.+++.... ...
T Consensus 178 ~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~ 247 (299)
T 2z2n_A 178 IPTPASGPVGITKGNDDA-LWFVEII---GNKIGRITT-SGE---ITEFKIPTPNARPHAITAGAGIDLWFTEWG--ANK 247 (299)
T ss_dssp CSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETT--TTE
T ss_pred CCCCCCcceeEEECCCCC-EEEEccC---CceEEEECC-CCc---EEEEECCCCCCCceeEEECCCCCEEEeccC--Cce
Confidence 111111122 2666665 6665543 346999998 444 333322222233445555544677665422 357
Q ss_pred EEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|++++. +|+. ..+..+ ...+.++.. ++ +.+++..+ ...++++++
T Consensus 248 i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~-g~l~v~~~----~~~l~~~~~ 293 (299)
T 2z2n_A 248 IGRLTS-NNII-EEYPIQIKSAEPHGICF-DG-ETIWFAME----CDKIGKLTL 293 (299)
T ss_dssp EEEEET-TTEE-EEEECSSSSCCEEEEEE-CS-SCEEEEET----TTEEEEEEE
T ss_pred EEEECC-CCce-EEEeCCCCCCccceEEe-cC-CCEEEEec----CCcEEEEEc
Confidence 999998 6754 444322 234555665 44 45776643 247888887
No 487
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.34 E-value=0.042 Score=58.49 Aligned_cols=158 Identities=8% Similarity=0.043 Sum_probs=84.7
Q ss_pred EeeEEeCCC--CcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccc
Q psy4818 144 LKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 221 (734)
Q Consensus 144 ~~~~~~SPD--G~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~ 221 (734)
-.+++|+|| +..| |..+.. ..|+++|+++|+............+++|++||+ ||++.... .
T Consensus 141 P~gvavd~~s~~g~L-yv~D~~----~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~-----------~ 203 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDL-YWVGQR----DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQS-----------S 203 (433)
T ss_dssp CCEEEECTTTTTCEE-EEECBT----SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCS-----------C
T ss_pred CceEEEccccCCCEE-EEEeCC----CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCC-----------C
Confidence 457899995 4444 445443 469999998887543222222246899999999 65554211 0
Q ss_pred cCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec
Q psy4818 222 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 301 (734)
Q Consensus 222 ~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~ 301 (734)
.....++............ .......+ .+++++|++..|++.. .....|+.++.+++.. ...+..
T Consensus 204 ~~~~gv~~~~~~~~~~~~~-~~~~~~~P---~giavd~~~G~lyv~d---~~~~~V~~~d~~~g~~--------~~~~~~ 268 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERL-SLCNARGA---KTCAVHPQNGKIYYTR---YHHAMISSYDPATGTL--------TEEEVM 268 (433)
T ss_dssp TTSEEEEEECGGGTTCCEE-EEEECSSB---CCCEECTTTCCEEECB---TTCSEEEEECTTTCCE--------EEEEEE
T ss_pred cccceEEEEECCCCeeccc-cccccCCC---CEEEEeCCCCeEEEEE---CCCCEEEEEECCCCeE--------EEEEec
Confidence 0112344443332221111 11111112 3578899555566543 2236899999886321 011111
Q ss_pred --cccceE-EEEEecCCeEEEEeCCCCCCceEEEEecC
Q psy4818 302 --GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLN 336 (734)
Q Consensus 302 --~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 336 (734)
...... -.++|+|++||+.-.. +.+|++++.+
T Consensus 269 ~~~~~~~~~ia~dpdG~~LYvad~~---~~~I~~~~~d 303 (433)
T 4hw6_A 269 MDTKGSNFHIVWHPTGDWAYIIYNG---KHCIYRVDYN 303 (433)
T ss_dssp CSCCSSCEEEEECTTSSEEEEEETT---TTEEEEEEBC
T ss_pred cCCCCCcccEEEeCCCCEEEEEeCC---CCEEEEEeCC
Confidence 111111 2389999988876432 4579998876
No 488
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.34 E-value=0.00088 Score=69.60 Aligned_cols=126 Identities=11% Similarity=0.075 Sum_probs=67.5
Q ss_pred ecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCcee---eecccc-ceE--EEEEecCCeEEEEeCCC-C----C
Q psy4818 258 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT---VIPGMD-HHH--EIIANNGPELIVKTTKN-A----P 326 (734)
Q Consensus 258 SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~---l~~~~~-~~~--~~~s~dg~~l~~~s~~~-~----~ 326 (734)
+++++.+++... +.++.+|+.++ ...+........ ...+.. .+. -.+++||+++|+..... + .
T Consensus 219 ~~~~~~~~~vs~-----~~V~viD~~~~-~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~ 292 (368)
T 1mda_H 219 ANYPGMLVWAVA-----SSILQGDIPAA-GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292 (368)
T ss_dssp ETTTTEEEECBS-----SCCEEEECCSS-CCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred cccCCEEEEEcC-----CEEEEEECCCC-cceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc
Confidence 888888777653 57899998762 111111011000 000000 110 23899999999865411 1 0
Q ss_pred CceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeC-CEEEEEEEeCCceeEEEEECCCCceeeeeCCC
Q psy4818 327 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 395 (734)
Q Consensus 327 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~~ 395 (734)
...+.++|+++.+ ...-++-. .....+.+..+ +++++... .+...|.++|+++++.++.|...
T Consensus 293 ~~~~~ViD~~t~~---vv~~i~vg--~~p~gi~~s~Dg~~l~va~~-~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 293 AENTSSVTASVGQ---TSGPISNG--HDSDAIIAAQDGASDNYANS-AGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEEEEEESSSCC---EEECCEEE--EEECEEEECCSSSCEEEEEE-TTTTEEEEEESSSCEEEEECCCC
T ss_pred CCCEEEEECCCCe---EEEEEECC--CCcceEEECCCCCEEEEEcc-CCCCeEEEEECCCCcEEEEEECC
Confidence 1235699998764 22222211 11233444443 45666554 12368999999999988888644
No 489
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.30 E-value=0.089 Score=52.08 Aligned_cols=196 Identities=9% Similarity=0.062 Sum_probs=101.7
Q ss_pred EEeeEEe-CCCCcEEEEEEeCCCCceEEEEEEECCCCCccccc-cc-ccccCeeEEEcCCcEEEEEEEecCCCCCCCCcc
Q psy4818 143 ALKLYAF-SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 219 (734)
Q Consensus 143 ~~~~~~~-SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~-~~-~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~ 219 (734)
...++++ +++|+.+ ++ +..+ ...|+++| .+|+.+... .. ......++++|||+ |+++..
T Consensus 78 ~p~~i~~~~~~g~l~-v~-~~~~--~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------ 139 (286)
T 1q7f_A 78 YPNRVAVVRNSGDII-VT-ERSP--THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVEC------------ 139 (286)
T ss_dssp SEEEEEEETTTTEEE-EE-ECGG--GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEET------------
T ss_pred CceEEEEEcCCCeEE-EE-cCCC--CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEEC------------
Confidence 3567888 5777643 33 3211 24699999 445533211 11 11235788999996 555432
Q ss_pred cccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceee
Q psy4818 220 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 299 (734)
Q Consensus 220 ~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l 299 (734)
....|++++..+. .+..+..........+++++|||+ |++... ....|++++.++ . ....+
T Consensus 140 ---~~~~i~~~~~~g~---~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~g-~--------~~~~~ 200 (286)
T 1q7f_A 140 ---KVMRVIIFDQNGN---VLHKFGCSKHLEFPNGVVVNDKQE-IFISDN---RAHCVKVFNYEG-Q--------YLRQI 200 (286)
T ss_dssp ---TTTEEEEECTTSC---EEEEEECTTTCSSEEEEEECSSSE-EEEEEG---GGTEEEEEETTC-C--------EEEEE
T ss_pred ---CCCEEEEEcCCCC---EEEEeCCCCccCCcEEEEECCCCC-EEEEEC---CCCEEEEEcCCC-C--------EEEEE
Confidence 1236888775432 222232212222456789999998 444322 236899999865 1 11111
Q ss_pred ecc--ccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCce
Q psy4818 300 IPG--MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 376 (734)
Q Consensus 300 ~~~--~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (734)
... ...... .++++|. +|+....+ +..|.+++.++.. ...+...........+.+..++.++++ ..+ .
T Consensus 201 ~~~g~~~~p~~i~~d~~G~-l~v~~~~~--~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~--~ 271 (286)
T 1q7f_A 201 GGEGITNYPIGVGINSNGE-ILIADNHN--NFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLA-SKD--Y 271 (286)
T ss_dssp SCTTTSCSEEEEEECTTCC-EEEEECSS--SCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEE-ETT--T
T ss_pred ccCCccCCCcEEEECCCCC-EEEEeCCC--CEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEE-CCC--C
Confidence 111 111222 2778874 66554321 2369999975432 233333322222345555555777776 333 5
Q ss_pred eEEEEECC
Q psy4818 377 VMDLHDLN 384 (734)
Q Consensus 377 ~l~~~dl~ 384 (734)
.|.+|++.
T Consensus 272 ~v~v~~~~ 279 (286)
T 1q7f_A 272 RLYIYRYV 279 (286)
T ss_dssp EEEEEECS
T ss_pred eEEEEEcc
Confidence 78888773
No 490
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.28 E-value=0.00096 Score=76.02 Aligned_cols=207 Identities=7% Similarity=0.014 Sum_probs=115.4
Q ss_pred EeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCC----CCcccccccc-cccCeeEEEcCCcEEEEEEEecCCCCCCCCc
Q psy4818 144 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----GKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTE 218 (734)
Q Consensus 144 ~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~----g~~~~~~~~~-~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~ 218 (734)
..++.|++++.+|.|+-... ..|+++++.+ .......... ....++++.+.++.||++..
T Consensus 408 p~gla~d~~~~~Ly~sD~~~----~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~----------- 472 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQ----RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 472 (699)
T ss_dssp CCCCEEETTTTEEEECCTTT----TSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT-----------
T ss_pred eEEEccccccCeEEEEecCC----CeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec-----------
Confidence 34688999888877654322 2588899876 2221111111 12246777766777776531
Q ss_pred ccccCCcEEEEEECCCCCCCCeeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCce
Q psy4818 219 TTAHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 297 (734)
Q Consensus 219 ~~~~~~~~l~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 297 (734)
...+|++.++.+... ..+... ...+ .+++++|++++|+++... ....|+++++++ ... .
T Consensus 473 ----~~~~I~v~d~dg~~~--~~l~~~~~~~P---~giavDp~~g~ly~td~~--~~~~I~~~~~dG-~~~--------~ 532 (699)
T 1n7d_A 473 ----VLGTVSVADTKGVKR--KTLFREQGSKP---RAIVVDPVHGFMYWTDWG--TPAKIKKGGLNG-VDI--------Y 532 (699)
T ss_dssp ----TTSCEEEEBSSSCCE--EEECCCSSCCC---CCEECCSSSSCCEECCCS--SSCCEEBCCSSS-CCC--------C
T ss_pred ----cCCeEEEEecCCCce--EEEEeCCCCCc---ceEEEccCCCcEEEcccC--CCCeEEEEeCCC-CCe--------e
Confidence 123688887765421 122221 1122 367899998888765421 226899988876 211 1
Q ss_pred eeec-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCC-CceeEEEEEeeCCEEEEEEEeCC
Q psy4818 298 TVIP-GMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNV 374 (734)
Q Consensus 298 ~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 374 (734)
.++. ... ...-.|++++++||+.-. ...+|+++++++.. .+.++.... .....++.+. ++.+|++. ..
T Consensus 533 ~l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd-~~~lywtd--~~ 603 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVF-EDKVFWTD--II 603 (699)
T ss_dssp EESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEE-TTEEEEEC--ST
T ss_pred EEEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEE-CCEEEEEe--CC
Confidence 1211 111 111238888888998653 24679999998654 244443211 1111223333 46777765 33
Q ss_pred ceeEEEEECCCCceeeeeCC
Q psy4818 375 RSVMDLHDLNTGKRLHSFPL 394 (734)
Q Consensus 375 ~~~l~~~dl~~g~~~~~l~~ 394 (734)
...|.+++..+|+.++.|..
T Consensus 604 ~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 604 NEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TTCEEEEETTTEEEEECCCT
T ss_pred CCeEEEEEccCCCceEEeec
Confidence 46899999878887666654
No 491
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.22 E-value=0.15 Score=56.99 Aligned_cols=224 Identities=11% Similarity=0.120 Sum_probs=127.8
Q ss_pred cEEEEEEeCCCCceEEEEEEECCCCCccc-cccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEE
Q psy4818 154 KHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 231 (734)
Q Consensus 154 ~~la~~~~~~g~~~~~l~v~dl~~g~~~~-~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (734)
.+|.|+.. ..|..+|+++..... ....+. ...+++|.+++..||++... ..+|++.+
T Consensus 7 ~~Ll~s~~------~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~---------------~~~I~r~~ 65 (628)
T 4a0p_A 7 AFLLFSRR------ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS---------------LKTISRAF 65 (628)
T ss_dssp CEEEEEET------TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT---------------TTEEEEEE
T ss_pred cEEEEEeC------CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC---------------CCeEEEEE
Confidence 36777632 368999998765311 111111 23588999999888887532 34799988
Q ss_pred CCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee-ccccceEE-E
Q psy4818 232 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDHHHE-I 309 (734)
Q Consensus 232 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~-~~~~~~~~-~ 309 (734)
+++...+ .+....- ..-.++++.+.++.|+++.. ....|.++++++. . ...++ .....-.. .
T Consensus 66 ~~g~~~~--~v~~~g~--~~P~GlAvD~~~~~LY~tD~---~~~~I~v~~~dG~-~--------~~~l~~~~l~~P~~ia 129 (628)
T 4a0p_A 66 MNGSALE--HVVEFGL--DYPEGMAVDWLGKNLYWADT---GTNRIEVSKLDGQ-H--------RQVLVWKDLDSPRALA 129 (628)
T ss_dssp TTSCSCE--EEECSSC--SCCCEEEEETTTTEEEEEET---TTTEEEEEETTST-T--------CEEEECSSCCCEEEEE
T ss_pred CCCCCcE--EEEeCCC--CCcceEEEEeCCCEEEEEEC---CCCEEEEEecCCC-c--------EEEEEeCCCCCcccEE
Confidence 8765322 2333211 11246888888998887643 3368999999872 1 12233 22222222 2
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEee-CCEEEEEEEeCCceeEEEEECCCCce
Q psy4818 310 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDLNTGKR 388 (734)
Q Consensus 310 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~dl~~g~~ 388 (734)
+.|....||+.-. +...+|+++++++.. .+.++... ....++.+.. ++.||++-. ....|+++++ +|..
T Consensus 130 vdp~~G~lY~tD~--g~~~~I~r~~~dG~~---~~~l~~~~--~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~-dG~~ 199 (628)
T 4a0p_A 130 LDPAEGFMYWTEW--GGKPKIDRAAMDGSE---RTTLVPNV--GRANGLTIDYAKRRLYWTDL--DTNLIESSNM-LGLN 199 (628)
T ss_dssp EETTTTEEEEEEC--SSSCEEEEEETTSCS---CEEEECSC--SSEEEEEEETTTTEEEEEET--TTTEEEEEET-TSCS
T ss_pred EccCCCeEEEeCC--CCCCEEEEEeCCCCc---eEEEECCC--CCcceEEEccccCEEEEEEC--CCCEEEEEcC-CCCc
Confidence 6776777887543 225689999998765 35555422 2334555543 477887653 3468999999 4543
Q ss_pred eeeeCCCCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 389 LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 389 ~~~l~~~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.+.+........+++.. ++.++++- . .-..|+++|.
T Consensus 200 ~~v~~~~l~~P~glav~--~~~ly~tD--~-~~~~I~~~dk 235 (628)
T 4a0p_A 200 REVIADDLPHPFGLTQY--QDYIYWTD--W-SRRSIERANK 235 (628)
T ss_dssp CEEEEECCSCEEEEEEE--TTEEEEEE--T-TTTEEEEEET
T ss_pred eEEeeccCCCceEEEEE--CCEEEEec--C-CCCEEEEEEC
Confidence 33332211122244433 35566543 2 2347888886
No 492
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.21 E-value=0.12 Score=52.46 Aligned_cols=200 Identities=8% Similarity=0.029 Sum_probs=102.8
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC-ccccccc----------cc-ccCeeEEEcCCcEEEEEEEecC
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVLK----------NV-KFPSISWTHDHKGFFYNQYCDI 210 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~-~~~~~~~----------~~-~~~~~~wSpDg~~l~y~~~~~~ 210 (734)
...+++++|||+ | |..+... ..|+++|.++.. .+. +.. .. ...+++++|++..||++...
T Consensus 92 ~p~gia~d~~g~-l-~v~d~~~---~~v~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~-- 163 (329)
T 3fvz_A 92 LPHGLSIDTDGN-Y-WVTDVAL---HQVFKLDPHSKEGPLL-ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY-- 163 (329)
T ss_dssp SEEEEEECTTSC-E-EEEETTT---TEEEEECTTCSSCCSE-EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS--
T ss_pred CceEEEECCCCC-E-EEEECCC---CEEEEEeCCCCeEEEE-EecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC--
Confidence 356789999999 3 3444322 369999987653 221 111 00 23578999954456655421
Q ss_pred CCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCC--------CCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeC
Q psy4818 211 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN--------GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL 282 (734)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~--------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~ 282 (734)
...+|++++.... .+..+.... ......+++++||+..|++... ....|.+++.
T Consensus 164 ------------~~~~I~~~~~~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~---~~~~I~~~~~ 225 (329)
T 3fvz_A 164 ------------CNSRIVQFSPSGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR---ENGRIQCFKT 225 (329)
T ss_dssp ------------SCCEEEEECTTSC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---TTTEEEEEET
T ss_pred ------------CCCeEEEEcCCCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---CCCEEEEEEC
Confidence 1236777764321 112221110 0012467899999777766542 2368999999
Q ss_pred CCCCCCcccCCCCceeeec-cc-cceEEE-EEecCCeEEEEeCC----CCCCceEEEEecCCCCCCCceEeecC--CCCc
Q psy4818 283 HSLPDGKISGKFPLKTVIP-GM-DHHHEI-IANNGPELIVKTTK----NAPKGKVVTINLNNPCEKNWKTLIPE--DENR 353 (734)
Q Consensus 283 ~~~~~~~l~~~~~~~~l~~-~~-~~~~~~-~s~dg~~l~~~s~~----~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~ 353 (734)
++|. ....+.. .. ...+.. ++| ..++..... +....+++++++.++. +...+.. ....
T Consensus 226 ~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~---~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 226 DTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGE---IIDVFKPVRKHFD 292 (329)
T ss_dssp TTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCC---EEEEECCSSSCCS
T ss_pred CCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCe---EEEEEcCCCCccC
Confidence 8532 1111111 11 111222 555 222222111 1224479999987765 3333321 1123
Q ss_pred eeEEEEEeeCCEEEEEEEeCCceeEEEEEC
Q psy4818 354 TLDVVAAVANNKLIVHYIQNVRSVMDLHDL 383 (734)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~dl 383 (734)
....+.+..++.+|++...+ ..|++|++
T Consensus 293 ~p~~ia~~~dG~lyvad~~~--~~I~~~~~ 320 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAHT--NTVWKFTL 320 (329)
T ss_dssp SEEEEEECTTSEEEEEESSS--CCEEEEEE
T ss_pred CeeEEEECCCCCEEEEECCC--CEEEEEeC
Confidence 34455555556777665433 57888887
No 493
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.19 E-value=0.21 Score=49.39 Aligned_cols=229 Identities=13% Similarity=0.067 Sum_probs=121.2
Q ss_pred EEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--cccccCeeEEEcCCcEEEEEEEecCCCCCCCCccc
Q psy4818 143 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 220 (734)
Q Consensus 143 ~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~--~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~ 220 (734)
...++.+++||+ |.++ +..+ ..|+++|.. |+...... .......++++++|+ |+++...
T Consensus 63 ~~~~i~~~~~g~-l~v~-~~~~---~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------ 123 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFT-ENGA---NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQLN------------ 123 (300)
T ss_dssp CEEEEEECTTSC-EEEE-ETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEETT------------
T ss_pred cceeEEECCCCC-EEEE-ecCC---CeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEccC------------
Confidence 367788999997 3333 3221 358899988 65432211 112235778888885 5554321
Q ss_pred ccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeee
Q psy4818 221 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 300 (734)
Q Consensus 221 ~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~ 300 (734)
...|++++.. +. ...+..+.......++.++++|+ |++... ....|++++..+ . .....
T Consensus 124 ---~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~~g-~---------~~~~~ 182 (300)
T 2qc5_A 124 ---GDRIGKLTAD-GT---IYEYDLPNKGSYPAFITLGSDNA-LWFTEN---QNNSIGRITNTG-K---------LEEYP 182 (300)
T ss_dssp ---TTEEEEECTT-SC---EEEEECSSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECTTC-C---------EEEEE
T ss_pred ---CCeEEEECCC-CC---EEEccCCCCCCCceeEEECCCCC-EEEEec---CCCeEEEECCCC-c---------EEEee
Confidence 2267777665 21 12222222223456788999999 444332 225799998843 1 11111
Q ss_pred --ccccceEE-EEEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCCcee
Q psy4818 301 --PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 377 (734)
Q Consensus 301 --~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 377 (734)
........ .++++| .+|+.... ...|++++.+ +. +..............+....++.+++... +...
T Consensus 183 ~~~~~~~~~~i~~d~~g-~l~v~~~~---~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~--~~~~ 252 (300)
T 2qc5_A 183 LPTNAAAPVGITSGNDG-ALWFVEIM---GNKIGRITTT-GE---ISEYDIPTPNARPHAITAGKNSEIWFTEW--GANQ 252 (300)
T ss_dssp CSSTTCCEEEEEECTTS-SEEEEETT---TTEEEEECTT-CC---EEEEECSSTTCCEEEEEECSTTCEEEEET--TTTE
T ss_pred CCCCCCCcceEEECCCC-CEEEEccC---CCEEEEEcCC-Cc---EEEEECCCCCCCceEEEECCCCCEEEecc--CCCe
Confidence 11111122 256665 57765543 3469999983 33 23332221123344555554467776653 2357
Q ss_pred EEEEECCCCceeeeeCCC--CceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 378 MDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 378 l~~~dl~~g~~~~~l~~~--~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
|++++. +|+. ..+..+ ...+.++..++++ .+++... . .++++|+
T Consensus 253 i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g-~l~v~~~---~--~i~~~~p 298 (300)
T 2qc5_A 253 IGRITN-DNTI-QEYQLQTENAEPHGITFGKDG-SVWFALK---C--KIGKLNL 298 (300)
T ss_dssp EEEECT-TSCE-EEEECCSTTCCCCCEEECTTS-CEEEECS---S--EEEEEEE
T ss_pred EEEECC-CCcE-EEEECCccCCccceeEeCCCC-CEEEEcc---C--ceEEeCC
Confidence 999998 6764 333222 2334456666665 4665432 2 6888876
No 494
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.09 E-value=0.2 Score=53.12 Aligned_cols=152 Identities=9% Similarity=0.127 Sum_probs=87.1
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCC
Q psy4818 100 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 179 (734)
Q Consensus 100 g~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~ 179 (734)
++.+|+.-.. ..|++.+..++....+... .....+++|++||++|.++-..++.....+++++.+++.
T Consensus 149 ~g~Lyv~d~~-----~~I~~id~~~~~v~~~~~~-------~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 149 HNHLYLVGEQ-----HPTRLIDFEKEYVSTVYSG-------LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp EEEEEEEEBT-----EEEEEEETTTTEEEEEECC-------CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCeEEEEeCC-----CcEEEEECCCCEEEEEecC-------CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 4566655432 4566666544444444431 122568999999997766655444434566777755432
Q ss_pred cccccc-cccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEe
Q psy4818 180 DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 258 (734)
Q Consensus 180 ~~~~~~-~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S 258 (734)
...... ......+++++|++..||++.. ...+|++++.++... ..++..... .+-.+++++
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~---------------~~~~V~~~~~~~~~~--~~~~~~~~~-~~P~gia~~ 278 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSW---------------NAGQVFRYDFTTQET--TPLFTIQDS-GWEFHIQFH 278 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEET---------------TTTEEEEEETTTTEE--EEEEECSSS-SCCEEEEEC
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEEC---------------CCCEEEEEECCCCcE--EEEEEcCCC-CcceeEEEc
Confidence 211111 1112367889996556776653 234799998875431 123333221 233578999
Q ss_pred cCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 259 DCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 259 pDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
|||++|++... ....|+.++.+.
T Consensus 279 pdG~~lyv~d~---~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 PSGNYAYIVVV---NQHYILRSDYDW 301 (430)
T ss_dssp TTSSEEEEEET---TTTEEEEEEEET
T ss_pred CCCCEEEEEEC---CCCEEEEEeCCc
Confidence 99998887642 236888887654
No 495
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.00 E-value=0.097 Score=52.40 Aligned_cols=238 Identities=9% Similarity=-0.042 Sum_probs=114.6
Q ss_pred eEEEEEEECCCCCccccc-ccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCC---CCCeeE
Q psy4818 167 WNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ---DKDIPV 242 (734)
Q Consensus 167 ~~~l~v~dl~~g~~~~~~-~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~---~~~~~v 242 (734)
..+++++|+.+++..... ....+.......-+++-++|..... ......+++.++.+.. .+. +
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~-----------~~~~~~~~~~d~~~~~~~~W~~--~ 96 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG-----------RSRLSSVECLDYTADEDGVWYS--V 96 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-----------SCBCCCEEEEETTCCTTCCCEE--E
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC-----------CccCceEEEEECCCCCCCeeEE--C
Confidence 357899999887632211 1111212233345554333332211 1223468888887765 321 1
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEecCCC--CceEEEEeCCCCCCCcccCCCCceeeecc--ccceEEEEEecCCeEE
Q psy4818 243 VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPG--MDHHHEIIANNGPELI 318 (734)
Q Consensus 243 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--~~~i~~~d~~~~~~~~l~~~~~~~~l~~~--~~~~~~~~s~dg~~l~ 318 (734)
-..+. +..... ...-+++ |++....... .++++++|+.+. .|..+..- .......... +++||
T Consensus 97 ~~~p~-~r~~~~-~~~~~~~-lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~-~~~iy 163 (301)
T 2vpj_A 97 APMNV-RRGLAG-ATTLGDM-IYVSGGFDGSRRHTSMERYDPNID---------QWSMLGDMQTAREGAGLVVA-SGVIY 163 (301)
T ss_dssp CCCSS-CCBSCE-EEEETTE-EEEECCBCSSCBCCEEEEEETTTT---------EEEEEEECSSCCBSCEEEEE-TTEEE
T ss_pred CCCCC-Ccccee-EEEECCE-EEEEcccCCCcccceEEEEcCCCC---------eEEECCCCCCCcccceEEEE-CCEEE
Confidence 11111 111111 2223555 4444332222 278999999872 34443211 1112222333 45687
Q ss_pred EEeCCCC--CCceEEEEecCCCCCCCceEeecCCCCceeEEEEEeeCCEEEEEEEeCC---ceeEEEEECCCCceeeeeC
Q psy4818 319 VKTTKNA--PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV---RSVMDLHDLNTGKRLHSFP 393 (734)
Q Consensus 319 ~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~l~~~dl~~g~~~~~l~ 393 (734)
+....++ ....++.+|+.+.. |+.+.+.........+... +++|++....++ ...++.+|+.+++. +.+.
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~ 238 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGH---WTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSW-TTVT 238 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE-EEEC
T ss_pred EECCCCCCcccceEEEEeCCCCc---EEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcE-EECC
Confidence 7754332 24569999998765 8776432211111122233 478887765443 35799999987775 3332
Q ss_pred -CC--CceEEeeccCcccceEEEEEecCC--CCceEEEEeCCCCcCCCCCCceeEEe
Q psy4818 394 -LD--LGQITHISGRRKYNEVFYGFTSFL--QPGTIYHCNIPENITDQDDFKPTIFR 445 (734)
Q Consensus 394 -~~--~g~v~~~~~~~d~~~l~~~~ss~~--~P~~~~~~d~~~~~~~~~~~~~~~~~ 445 (734)
.+ ........ . ++++++...... .-..++.||+ +++ +++.+.
T Consensus 239 ~~p~~r~~~~~~~--~-~~~i~v~GG~~~~~~~~~v~~yd~-----~~~--~W~~~~ 285 (301)
T 2vpj_A 239 SMTTPRCYVGATV--L-RGRLYAIAGYDGNSLLSSIECYDP-----IID--SWEVVT 285 (301)
T ss_dssp CCSSCCBSCEEEE--E-TTEEEEECCBCSSSBEEEEEEEET-----TTT--EEEEEE
T ss_pred CCCCcccceeEEE--E-CCEEEEEcCcCCCcccccEEEEcC-----CCC--eEEEcC
Confidence 22 11111121 1 234554432111 1256889998 455 565543
No 496
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.96 E-value=0.14 Score=49.72 Aligned_cols=191 Identities=12% Similarity=0.093 Sum_probs=103.9
Q ss_pred eeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCC
Q psy4818 145 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 224 (734)
Q Consensus 145 ~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~ 224 (734)
.++.++ |+.|..+....| +|.++|+++|+.+...... ...+..-+++|++||...- ..
T Consensus 58 qGL~~~--~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~l~~-~~FgeGit~~g~~Ly~ltw---------------~~ 115 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQG----TLRQLSLESAQPVWMERLG-NIFAEGLASDGERLYQLTW---------------TE 115 (268)
T ss_dssp EEEEEE--TTEEEEEETTTT----EEEECCSSCSSCSEEEECT-TCCEEEEEECSSCEEEEES---------------SS
T ss_pred ceEEEE--CCEEEEEcCCCC----EEEEEECCCCcEEeEECCC-CcceeEEEEeCCEEEEEEc---------------cC
Confidence 456676 566666554433 3999999999976544222 2234445778888876642 23
Q ss_pred cEEEEEECCCCCCCCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeeccc-
Q psy4818 225 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM- 303 (734)
Q Consensus 225 ~~l~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~~- 303 (734)
..+++++..+.... .-+..+.+ +...++||+.|+.+. + .+.|+.+|.++.. ....+.-..
T Consensus 116 ~~v~V~D~~Tl~~~--~ti~~~~e-----GwGLt~Dg~~L~vSd--G--s~~l~~iDp~T~~--------v~~~I~V~~~ 176 (268)
T 3nok_A 116 GLLFTWSGMPPQRE--RTTRYSGE-----GWGLCYWNGKLVRSD--G--GTMLTFHEPDGFA--------LVGAVQVKLR 176 (268)
T ss_dssp CEEEEEETTTTEEE--EEEECSSC-----CCCEEEETTEEEEEC--S--SSEEEEECTTTCC--------EEEEEECEET
T ss_pred CEEEEEECCcCcEE--EEEeCCCc-----eeEEecCCCEEEEEC--C--CCEEEEEcCCCCe--------EEEEEEeCCC
Confidence 47999998775421 12222211 235568999887642 2 3689999998831 111111111
Q ss_pred --cc--eEEE-EEecCCeEEEEeCCCCCCceEEEEecCCCCCCCceEee---c------CCCCceeEEEEEeeC-CEEEE
Q psy4818 304 --DH--HHEI-IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI---P------EDENRTLDVVAAVAN-NKLIV 368 (734)
Q Consensus 304 --~~--~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~---~------~~~~~~~~~~~~~~~-~~l~~ 368 (734)
.. .... |. +| +||..... ...|.++|.++++-..+..+- + .....++.++.+..+ +++++
T Consensus 177 g~~v~~lNeLe~~-dG-~lyanvw~---s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 177 GQPVELINELECA-NG-VIYANIWH---SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp TEECCCEEEEEEE-TT-EEEEEETT---CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred CcccccccccEEe-CC-EEEEEECC---CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence 10 0111 33 55 67754433 246999999887621111211 1 112356777776643 45555
Q ss_pred EEEeCCceeEEEEEC
Q psy4818 369 HYIQNVRSVMDLHDL 383 (734)
Q Consensus 369 ~~~~~~~~~l~~~dl 383 (734)
+. . --+.+|.+.+
T Consensus 252 TG-K-~Wp~~~ev~~ 264 (268)
T 3nok_A 252 TG-K-LWPRLFEVRL 264 (268)
T ss_dssp EE-T-TCSEEEEEEE
T ss_pred eC-C-CCCceEEEEE
Confidence 43 2 2356665543
No 497
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.91 E-value=0.13 Score=57.48 Aligned_cols=218 Identities=11% Similarity=0.079 Sum_probs=116.6
Q ss_pred EEEEEEECCCCC-ccccccccc-ccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCCCCCCeeEEec
Q psy4818 168 NTLHIKDVDTGK-DYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 245 (734)
Q Consensus 168 ~~l~v~dl~~g~-~~~~~~~~~-~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~~~~~~~v~~~ 245 (734)
.+|+++|+++.. ......... ...+++|++++..||++... ..+|++.++.+... ...+...
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~---------------~~~I~r~~~~g~~~-~~~v~~~ 81 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS---------------EEAIKRTEFNKTES-VQNVVVS 81 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETT---------------TTEEEEEEC------CEEEECS
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECC---------------CCeEEEEEccCCCc-eEEEEeC
Confidence 368889988653 111111111 22578999999888887532 23788888876422 1223332
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeec-cccceE-EEEEecCCeEEEEeCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHH-EIIANNGPELIVKTTK 323 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~-~~~~~~-~~~s~dg~~l~~~s~~ 323 (734)
. ...-.++++.+.++.|++... ....|.++++++. . .+.++. ....-. -.+.|.++.|||.-..
T Consensus 82 ~--~~~P~GlAvD~~~~~ly~~d~---~~~~I~v~~~dG~-~--------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g 147 (619)
T 3s94_A 82 G--LLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGS-L--------RKVLFWQELDQPRAIALDPSSGFMYWTDWG 147 (619)
T ss_dssp S--CSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC-S--------CEEEECSSCSCCCCEEEETTTTEEEEEECS
T ss_pred C--CCCcCeEEEEecCCEEEEEeC---CCCEEEEEECCCC-C--------EEEEEeCCCCCCceEEEecCCCeEEEeccC
Confidence 1 123467899999998887642 2368999999872 1 122331 111111 1377877788876432
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-CCceEEe
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITH 401 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~-~~g~v~~ 401 (734)
...+|++.++++.. .+.++... -....++.+. +++.||+.-. ....|+++++ +|...+.+.. ......+
T Consensus 148 --~~~~I~r~~~dG~~---~~~l~~~~-~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~-dG~~~~~~~~~~~~~P~g 218 (619)
T 3s94_A 148 --EVPKIERAGMDGSS---RFIIINSE-IYWPNGLTLDYEEQKLYWADA--KLNFIHKSNL-DGTNRQAVVKGSLPHPFA 218 (619)
T ss_dssp --SSCEEEEEETTSCS---CEEEECSS-CSSEEEEEEETTTTEEEEEET--TTCCEEEESS-SCCEEC---------CCC
T ss_pred --CCCEEEEEECCCCc---eEEEEeCC-CCCCcEEEEEccCCEEEEEeC--CCCeEEEecC-CCCccEEEEeCCCCCceE
Confidence 24679999998765 34455433 2233455554 3478887743 3468999999 5655444422 1111123
Q ss_pred eccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 402 ISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 402 ~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
++.. ++.++++ .+. -..++++|.
T Consensus 219 i~~~--~~~ly~t--d~~-~~~V~~~d~ 241 (619)
T 3s94_A 219 LTLF--EDILYWT--DWS-THSILACNK 241 (619)
T ss_dssp EEES--SSEEEEE--CTT-TCSEEEEES
T ss_pred EEEe--CCEEEEe--cCC-CCEEEEEEC
Confidence 3333 3455543 222 246888887
No 498
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.85 E-value=0.0042 Score=70.74 Aligned_cols=217 Identities=10% Similarity=0.017 Sum_probs=112.7
Q ss_pred EEEEEECCCCCcccccccccccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCCC---CCCCeeEEec
Q psy4818 169 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE---QDKDIPVVEF 245 (734)
Q Consensus 169 ~l~v~dl~~g~~~~~~~~~~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t~---~~~~~~v~~~ 245 (734)
.|+++++.+++............+++|.+++..||++... ..+|+++++.+. .....++...
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~---------------~~~I~~~~~~g~~~~~~~~~~i~~~ 451 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS---------------QRMICSTQLDRAHGVSSYDTVISRD 451 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTT---------------TTSBEEEESCCCCC-CCCCCBCCSC
T ss_pred ceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecC---------------CCeEEEEecCCCCCCcceEEEEeCC
Confidence 5888888877643322222233689999998888876421 236888887751 1111111111
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCCCCCCcccCCCCceeeecc-cc-ceEEEEEecCCeEEEEeCC
Q psy4818 246 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MD-HHHEIIANNGPELIVKTTK 323 (734)
Q Consensus 246 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~l~~~-~~-~~~~~~s~dg~~l~~~s~~ 323 (734)
.. ...++++.+.++.|+++. .....|+++++++. ....++.. .. ...-.++|++++||+.. .
T Consensus 452 ~~---~P~glavD~~~g~LY~tD---~~~~~I~v~d~dg~---------~~~~l~~~~~~~P~giavDp~~g~ly~td-~ 515 (699)
T 1n7d_A 452 IQ---APDGLAVDWIHSNIYWTD---SVLGTVSVADTKGV---------KRKTLFREQGSKPRAIVVDPVHGFMYWTD-W 515 (699)
T ss_dssp C-----CCCEECCCSSSBCEECC---TTTSCEEEEBSSSC---------CEEEECCCSSCCCCCEECCSSSSCCEECC-C
T ss_pred CC---CcceEEEEeeCCcEEEEe---ccCCeEEEEecCCC---------ceEEEEeCCCCCcceEEEccCCCcEEEcc-c
Confidence 11 113567777777776642 22367999998762 11222221 11 11113677777777643 2
Q ss_pred CCCCceEEEEecCCCCCCCceEeecCCCCceeEEEEEe-eCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-C--CceE
Q psy4818 324 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-D--LGQI 399 (734)
Q Consensus 324 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~-~--~g~v 399 (734)
+...+|+++++++.. .+.++... -....++.+. +++.||++-. ....|+++++ +|...+.+.. . ....
T Consensus 516 -~~~~~I~~~~~dG~~---~~~l~~~~-l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~-dG~~~~~~~~~~~~~~~P 587 (699)
T 1n7d_A 516 -GTPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDV-NGGNRKTILEDEKRLAHP 587 (699)
T ss_dssp -SSSCCEEBCCSSSCC---CCEESCSS-CSSCCCEEECTTTCCEEEEET--TTTEEEEECS-SSSCCEEECCCSSSCSSC
T ss_pred -CCCCeEEEEeCCCCC---eeEEEeCC-CCCccEEEEeccCCEEEEEec--CCCeEEEEcc-CCCceEEEEecCCcCCCc
Confidence 223579999987654 23333222 1222344454 3467777653 3468999999 4544343321 1 1111
Q ss_pred EeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 400 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 400 ~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
.++++ +++.++++- +. -..|+++|.
T Consensus 588 ~glav--d~~~lywtd--~~-~~~V~~~d~ 612 (699)
T 1n7d_A 588 FSLAV--FEDKVFWTD--II-NEAIFSANR 612 (699)
T ss_dssp CCCEE--ETTEEEEEC--ST-TTCEEEEET
T ss_pred eEeEE--ECCEEEEEe--CC-CCeEEEEEc
Confidence 12322 344555543 22 246888886
No 499
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.85 E-value=0.03 Score=57.53 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=77.6
Q ss_pred eEEEEEeCCCCCeEEEeCCC-CcCCCCcEEEeeEEeCCCCcEEEEEEeCCCCceEEEEEEECCCCCcccccc--------
Q psy4818 115 SILYVQRNLTGSTEVFLDPN-KLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-------- 185 (734)
Q Consensus 115 ~~l~~~~~~~g~~~~l~d~~-~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~-------- 185 (734)
..|++.+..++.....++.. .... ....+.+++++|++..+ |..+.++.....|+++|+++|+......
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~-~~~~~~~v~vd~~~g~~-yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITL-SNSFVNDLAVDLIHNFV-YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSC-TTCCCCEEEEETTTTEE-EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CeEEEEECCCCeEEEEEECChhhcc-cccccceEEEecCCCEE-EEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 35777665555433333322 1111 11234678999987654 5555432233689999998876322100
Q ss_pred ------cc----------------cccCeeEEEcCCcEEEEEEEecCCCCCCCCcccccCCcEEEEEECCC---CC-C--
Q psy4818 186 ------KN----------------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT---EQ-D-- 237 (734)
Q Consensus 186 ------~~----------------~~~~~~~wSpDg~~l~y~~~~~~~~~~~~~~~~~~~~~~l~~~~l~t---~~-~-- 237 (734)
.+ ....+++|||||+.||+.... ..+||+++... .. .
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~---------------~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH---------------STSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS---------------CSEEEEEEHHHHTCTTCCHH
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC---------------CCeEEEEEHHHhcCCCCChh
Confidence 00 112568999999999887642 22688776421 10 0
Q ss_pred ---CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCCC
Q psy4818 238 ---KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 284 (734)
Q Consensus 238 ---~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~~ 284 (734)
..+....... ...++++++||+ |++... ..+.|+++|.++
T Consensus 236 ~~~~~~~~~g~~g---~pdgia~d~~G~-l~va~~---~~~~V~~~d~~~ 278 (343)
T 2qe8_A 236 ELGSKIERYSEKP---ICDGISIDKDHN-IYVGDL---AHSAIGVITSAD 278 (343)
T ss_dssp HHHTTCEEEEECC---SCSCEEECTTCC-EEEEEG---GGTEEEEEETTT
T ss_pred hhhcceEecccCC---CCceEEECCCCC-EEEEcc---CCCeEEEEECCC
Confidence 0011111111 123578999986 343322 236899999844
No 500
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.32 Score=52.09 Aligned_cols=246 Identities=11% Similarity=0.041 Sum_probs=0.0
Q ss_pred eeEEeCC-CCcEEEEEEeCCCCceEEEEEEECCCCCccccccccc----ccCeeEE-------EcCCcEEEEEEEecCCC
Q psy4818 145 KLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV----KFPSISW-------THDHKGFFYNQYCDING 212 (734)
Q Consensus 145 ~~~~~SP-DG~~la~~~~~~g~~~~~l~v~dl~~g~~~~~~~~~~----~~~~~~w-------SpDg~~l~y~~~~~~~~ 212 (734)
.+++++| ++..|.++.... ..|+++|++++.......... ....++| ++||++||++....
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~----~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~--- 214 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGH----KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD--- 214 (496)
T ss_dssp EEEEEETTEEEEEEEEEETE----EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC---
T ss_pred CEEEEccCCCCEEEEEECCC----CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC---
Q ss_pred CCCCCcccccC---CcEEEEEECCC--CCC--CCeeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCceEEEEeCC--
Q psy4818 213 TADGTETTAHM---GQKIYYHVLGT--EQD--KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-- 283 (734)
Q Consensus 213 ~~~~~~~~~~~---~~~l~~~~l~t--~~~--~~~~v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~i~~~d~~-- 283 (734)
.. ...|++.+... .-. .+......-..+ .+++.+|++++|++..... ..|+++|++
T Consensus 215 ---------~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p---~giavdp~~g~LYvtd~~~---g~V~r~d~~~~ 279 (496)
T 3kya_A 215 ---------GKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQC---NGATIHPINGELYFNSYEK---GQVFRLDLVDY 279 (496)
T ss_dssp ---------TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCC---CCEEECTTTCCEEEEETTT---TEEEEECHHHH
T ss_pred ---------CCcccCceEEEEecCCCCceeecccceeeccCCCc---eEEEEcCCCCeEEEEECCC---CEEEEEecccc
Q ss_pred -----CCCCCcccCCCC-----------ceeeeccccceEEE---EEecCCeEEEEeCCCCCCceEEE--EecCCCCCCC
Q psy4818 284 -----SLPDGKISGKFP-----------LKTVIPGMDHHHEI---IANNGPELIVKTTKNAPKGKVVT--INLNNPCEKN 342 (734)
Q Consensus 284 -----~~~~~~l~~~~~-----------~~~l~~~~~~~~~~---~s~dg~~l~~~s~~~~~~~~l~~--~d~~~~~~~~ 342 (734)
+ ... ...+..-....+.. |+|+|+.||+.-.. +++|++ .|..++....
T Consensus 280 ~~~~~t--------g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~---~h~I~kid~dg~~~~~~~ 348 (496)
T 3kya_A 280 FKTIKN--------GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN---NHYFMRSDYDEIKKEFIT 348 (496)
T ss_dssp HHHHHT--------TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT---TTEEEEEEEETTTTEECC
T ss_pred cccccC--------ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC---CCEEEEEecCCCcceecc
Q ss_pred ceEeecC--------------CCCceeEEEEEe-------eCCEEEEEEEeCCceeEEEEECCCCceeeeeCC-------
Q psy4818 343 WKTLIPE--------------DENRTLDVVAAV-------ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL------- 394 (734)
Q Consensus 343 ~~~l~~~--------------~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~l~~~dl~~g~~~~~l~~------- 394 (734)
...+... .-......+... .++.||++-..+ .+|++++. +|...+..-.
T Consensus 349 ~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N--~rIr~i~~-~G~v~TiaG~g~~~~~~ 425 (496)
T 3kya_A 349 PYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN--FCVRKVTP-EGIVSTYAGRGASTSLA 425 (496)
T ss_dssp CEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG--TEEEEECT-TCBEEEEEESCTTHHHH
T ss_pred cEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC--CEEEEEeC-CCCEEEEeccccccccc
Q ss_pred ----------------CCceEEeeccCcccceEEEEEecCCCCceEEEEeC
Q psy4818 395 ----------------DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 429 (734)
Q Consensus 395 ----------------~~g~v~~~~~~~d~~~l~~~~ss~~~P~~~~~~d~ 429 (734)
....-.++..+++...|+++=+.-. +|.++++
T Consensus 426 ~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~---rIrki~~ 473 (496)
T 3kya_A 426 DGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH---TIRTISM 473 (496)
T ss_dssp HSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTT---EEEEEEE
T ss_pred CccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC---EEEEEEC
Done!