Query psy4819
Match_columns 387
No_of_seqs 410 out of 1930
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 18:32:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4819.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4819hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13972 GSH-dependent disulfi 99.9 3E-25 6.5E-30 205.8 4.3 175 51-235 1-210 (215)
2 PLN02473 glutathione S-transfe 99.9 5E-25 1.1E-29 203.7 4.5 176 50-230 1-211 (214)
3 PRK09481 sspA stringent starva 99.9 8.4E-25 1.8E-29 202.5 4.5 171 51-229 10-201 (211)
4 PLN02395 glutathione S-transfe 99.9 9.3E-25 2E-29 201.9 4.0 177 50-231 1-211 (215)
5 PF00647 EF1G: Elongation fact 99.9 1.2E-25 2.6E-30 184.3 -2.2 96 279-376 1-105 (107)
6 PRK10542 glutathionine S-trans 99.9 1.6E-24 3.6E-29 198.0 4.8 171 52-230 1-197 (201)
7 PRK11752 putative S-transferas 99.9 1.8E-22 3.8E-27 193.7 5.6 175 51-230 44-258 (264)
8 PRK15113 glutathione S-transfe 99.9 2.7E-22 5.8E-27 186.1 5.0 170 51-230 5-208 (214)
9 COG0625 Gst Glutathione S-tran 99.9 7.4E-22 1.6E-26 182.4 7.0 166 52-225 1-199 (211)
10 TIGR01262 maiA maleylacetoacet 99.8 1.1E-21 2.3E-26 180.6 6.8 171 53-231 1-205 (210)
11 KOG0867|consensus 99.8 4.8E-21 1E-25 179.8 7.0 174 50-228 1-207 (226)
12 PRK10357 putative glutathione 99.8 7.4E-21 1.6E-25 174.3 6.3 170 52-229 1-199 (202)
13 PLN02378 glutathione S-transfe 99.8 2.5E-19 5.5E-24 166.3 4.8 163 64-235 28-204 (213)
14 KOG1627|consensus 99.7 2E-19 4.4E-24 153.3 -2.5 98 282-381 1-107 (160)
15 PTZ00057 glutathione s-transfe 99.7 3.1E-18 6.8E-23 157.9 4.6 166 50-230 3-199 (205)
16 PLN02817 glutathione dehydroge 99.7 5.8E-18 1.3E-22 162.5 6.5 158 64-230 81-251 (265)
17 PLN02907 glutamate-tRNA ligase 99.7 6.3E-18 1.4E-22 181.2 5.8 151 50-223 1-159 (722)
18 KOG0406|consensus 99.7 2.7E-17 5.8E-22 152.8 6.4 176 50-231 8-212 (231)
19 KOG0868|consensus 99.7 8.3E-18 1.8E-22 148.2 2.7 170 52-230 6-207 (217)
20 TIGR00862 O-ClC intracellular 99.7 5E-17 1.1E-21 153.3 6.4 161 64-230 27-220 (236)
21 PRK10387 glutaredoxin 2; Provi 99.7 3.1E-17 6.7E-22 150.9 3.7 159 52-225 1-208 (210)
22 TIGR02182 GRXB Glutaredoxin, G 99.5 2E-15 4.3E-20 139.8 3.7 157 53-225 1-207 (209)
23 cd03196 GST_C_5 GST_C family, 99.5 1E-14 2.2E-19 122.6 6.3 97 132-228 2-115 (115)
24 cd03181 GST_C_EFB1gamma GST_C 99.5 9.9E-15 2.2E-19 122.8 4.8 101 136-236 1-122 (123)
25 KOG4420|consensus 99.5 4.4E-14 9.6E-19 131.2 7.6 182 46-232 21-289 (325)
26 cd03200 GST_C_JTV1 GST_C famil 99.4 8.3E-14 1.8E-18 113.6 5.1 95 117-221 2-96 (96)
27 cd03188 GST_C_Beta GST_C famil 99.4 1.4E-13 3E-18 113.8 6.0 91 136-228 2-114 (114)
28 cd03187 GST_C_Phi GST_C family 99.4 1.1E-13 2.5E-18 115.2 5.3 93 136-228 2-118 (118)
29 cd03186 GST_C_SspA GST_N famil 99.4 1.3E-13 2.8E-18 113.5 5.4 93 134-227 1-106 (107)
30 cd03189 GST_C_GTT1_like GST_C 99.4 2.3E-13 5E-18 113.9 6.1 90 131-222 2-119 (119)
31 cd03178 GST_C_Ure2p_like GST_C 99.4 1.2E-13 2.7E-18 114.4 4.3 92 136-228 1-112 (113)
32 cd03182 GST_C_GTT2_like GST_C 99.4 3.5E-13 7.7E-18 112.3 5.8 91 133-224 1-117 (117)
33 cd03185 GST_C_Tau GST_C family 99.4 2.7E-13 5.8E-18 114.5 5.1 97 134-230 1-115 (126)
34 cd03191 GST_C_Zeta GST_C famil 99.4 4.5E-13 9.8E-18 112.7 6.3 94 134-229 1-118 (121)
35 cd03177 GST_C_Delta_Epsilon GS 99.4 5.6E-13 1.2E-17 111.8 6.4 92 136-228 2-110 (118)
36 cd03190 GST_C_ECM4_like GST_C 99.4 9.7E-13 2.1E-17 114.7 6.2 96 135-230 3-118 (142)
37 cd03180 GST_C_2 GST_C family, 99.4 1.1E-12 2.4E-17 107.7 5.9 87 136-224 2-110 (110)
38 cd03183 GST_C_Theta GST_C fami 99.3 1E-12 2.2E-17 111.3 3.3 74 155-229 45-121 (126)
39 cd03207 GST_C_8 GST_C family, 99.3 8.9E-13 1.9E-17 107.7 2.6 73 154-229 29-101 (103)
40 cd03203 GST_C_Lambda GST_C fam 99.3 5.7E-12 1.2E-16 106.7 5.0 97 133-230 1-111 (120)
41 cd03195 GST_C_4 GST_C family, 99.2 6.3E-12 1.4E-16 105.4 4.9 91 134-229 1-112 (114)
42 cd03206 GST_C_7 GST_C family, 99.2 4.4E-12 9.4E-17 103.4 3.7 69 154-224 32-100 (100)
43 cd03209 GST_C_Mu GST_C family, 99.2 5.8E-12 1.3E-16 106.4 3.4 79 156-235 36-114 (121)
44 PF00043 GST_C: Glutathione S- 99.2 1.7E-11 3.7E-16 98.3 5.1 67 155-222 28-95 (95)
45 cd03184 GST_C_Omega GST_C fami 99.2 2.2E-11 4.8E-16 103.3 5.6 95 136-230 2-113 (124)
46 cd03204 GST_C_GDAP1 GST_C fami 99.2 2.4E-11 5.1E-16 101.8 5.2 70 155-224 29-111 (111)
47 cd03179 GST_C_1 GST_C family, 99.2 2.7E-11 6E-16 98.7 5.4 82 136-219 2-105 (105)
48 cd03208 GST_C_Alpha GST_C fami 99.2 2.9E-11 6.2E-16 104.9 4.7 74 158-232 42-117 (137)
49 cd03210 GST_C_Pi GST_C family, 99.1 2.6E-11 5.6E-16 103.3 4.0 79 156-235 36-117 (126)
50 KOG1695|consensus 99.1 1.1E-10 2.4E-15 107.7 7.1 168 52-230 4-200 (206)
51 cd03198 GST_C_CLIC GST_C famil 99.1 7.1E-11 1.5E-15 102.1 4.4 76 154-229 28-123 (134)
52 PF14497 GST_C_3: Glutathione 99.1 1E-10 2.3E-15 95.2 4.6 85 133-220 2-99 (99)
53 cd03201 GST_C_DHAR GST_C famil 99.0 2.3E-10 5E-15 97.2 5.4 75 156-230 31-110 (121)
54 PF13410 GST_C_2: Glutathione 99.0 3.4E-10 7.5E-15 85.8 5.1 63 155-217 6-69 (69)
55 cd00299 GST_C_family Glutathio 98.9 2.4E-09 5.3E-14 85.4 4.9 64 155-218 36-100 (100)
56 cd03192 GST_C_Sigma_like GST_C 98.9 3.8E-09 8.3E-14 86.2 5.8 62 156-218 40-104 (104)
57 cd03193 GST_C_Metaxin GST_C fa 98.8 4.4E-09 9.5E-14 83.6 4.9 64 156-219 20-88 (88)
58 cd03194 GST_C_3 GST_C family, 98.8 3E-09 6.4E-14 89.3 3.7 69 156-229 42-113 (114)
59 cd03202 GST_C_etherase_LigE GS 98.8 4.4E-09 9.6E-14 89.5 4.8 67 154-220 57-123 (124)
60 PLN02395 glutathione S-transfe 98.7 1.9E-08 4E-13 92.9 6.1 102 277-378 43-173 (215)
61 cd03205 GST_C_6 GST_C family, 98.7 3.6E-08 7.8E-13 80.0 5.4 62 154-218 36-98 (98)
62 PLN02473 glutathione S-transfe 98.6 5.3E-08 1.1E-12 89.9 5.8 101 279-379 46-175 (214)
63 PRK10542 glutathionine S-trans 98.6 9.9E-08 2.1E-12 87.0 6.9 102 277-380 42-165 (201)
64 KOG1422|consensus 98.5 1.2E-07 2.7E-12 86.3 5.9 151 73-230 35-205 (221)
65 PRK09481 sspA stringent starva 98.5 1.1E-07 2.5E-12 87.8 5.7 100 278-379 50-167 (211)
66 TIGR01262 maiA maleylacetoacet 98.5 2E-07 4.3E-12 85.6 7.1 101 278-380 43-172 (210)
67 PRK13972 GSH-dependent disulfi 98.5 1.7E-07 3.7E-12 86.8 6.7 98 278-379 43-172 (215)
68 PLN02907 glutamate-tRNA ligase 98.5 1.7E-07 3.6E-12 101.5 7.1 94 281-380 32-131 (722)
69 PRK11752 putative S-transferas 98.4 3.2E-07 7E-12 88.1 6.4 98 278-379 92-218 (264)
70 COG0625 Gst Glutathione S-tran 98.4 4.9E-07 1.1E-11 83.4 6.6 103 275-379 39-171 (211)
71 PRK15113 glutathione S-transfe 98.4 7.7E-07 1.7E-11 82.4 6.8 102 277-379 49-177 (214)
72 KOG0867|consensus 98.4 8.8E-07 1.9E-11 83.3 7.0 103 278-381 45-175 (226)
73 PRK10357 putative glutathione 98.3 7.4E-07 1.6E-11 81.5 6.0 96 280-378 42-163 (202)
74 cd03211 GST_C_Metaxin2 GST_C f 98.3 5.9E-07 1.3E-11 76.8 4.9 65 154-219 56-126 (126)
75 COG0435 ECM4 Predicted glutath 98.3 7.9E-07 1.7E-11 84.2 4.8 100 127-228 165-284 (324)
76 cd03212 GST_C_Metaxin1_3 GST_C 98.2 1.1E-06 2.3E-11 76.4 4.2 67 154-220 63-134 (137)
77 cd03197 GST_C_mPGES2 GST_C fam 98.1 2.2E-06 4.7E-11 75.2 4.2 49 172-220 97-145 (149)
78 cd03057 GST_N_Beta GST_N famil 98.0 1.4E-06 3.1E-11 67.2 0.1 68 52-124 1-77 (77)
79 PF14497 GST_C_3: Glutathione 98.0 8.4E-06 1.8E-10 66.1 4.3 64 317-380 2-78 (99)
80 KOG0868|consensus 97.9 1.3E-05 2.8E-10 71.6 5.2 102 277-380 48-175 (217)
81 cd03046 GST_N_GTT1_like GST_N 97.9 2.5E-06 5.4E-11 65.4 0.3 68 52-124 1-76 (76)
82 cd03200 GST_C_JTV1 GST_C famil 97.9 1.3E-05 2.8E-10 65.2 4.5 67 312-379 9-75 (96)
83 KOG2903|consensus 97.9 4.8E-06 1E-10 78.3 1.8 100 127-228 163-286 (319)
84 cd03048 GST_N_Ure2p_like GST_N 97.9 2.5E-06 5.5E-11 66.6 -0.2 69 51-124 1-80 (81)
85 KOG1147|consensus 97.9 4.1E-06 8.9E-11 85.6 1.3 98 127-230 66-164 (712)
86 cd03052 GST_N_GDAP1 GST_N fami 97.9 2.2E-06 4.7E-11 66.1 -0.8 63 52-119 1-72 (73)
87 PLN02378 glutathione S-transfe 97.8 4.2E-05 9.2E-10 70.9 6.6 98 278-379 51-160 (213)
88 PTZ00057 glutathione s-transfe 97.8 4.1E-05 8.8E-10 70.5 6.3 93 280-379 52-165 (205)
89 cd03188 GST_C_Beta GST_C famil 97.7 6E-05 1.3E-09 61.8 5.2 39 341-379 45-83 (114)
90 cd03041 GST_N_2GST_N GST_N fam 97.7 4.5E-06 9.8E-11 64.8 -1.8 68 51-123 1-77 (77)
91 PRK10387 glutaredoxin 2; Provi 97.7 7.4E-05 1.6E-09 68.5 5.9 95 280-380 41-182 (210)
92 PF14834 GST_C_4: Glutathione 97.7 3.3E-05 7.1E-10 64.4 3.1 92 133-229 1-113 (117)
93 cd03196 GST_C_5 GST_C family, 97.7 6.7E-05 1.4E-09 62.8 4.9 63 316-378 2-80 (115)
94 cd03045 GST_N_Delta_Epsilon GS 97.6 1.4E-05 3E-10 60.9 -0.3 65 52-121 1-74 (74)
95 KOG1147|consensus 97.6 6.4E-05 1.4E-09 77.1 4.2 75 299-380 55-129 (712)
96 PLN02817 glutathione dehydroge 97.5 0.00021 4.6E-09 68.8 7.3 96 279-378 105-211 (265)
97 cd03050 GST_N_Theta GST_N fami 97.5 1.9E-05 4.1E-10 60.8 -0.5 67 52-123 1-76 (76)
98 cd03059 GST_N_SspA GST_N famil 97.5 1.9E-05 4.2E-10 59.9 -0.6 66 52-123 1-73 (73)
99 cd03189 GST_C_GTT1_like GST_C 97.5 0.00016 3.6E-09 60.0 4.8 37 343-379 58-94 (119)
100 cd03177 GST_C_Delta_Epsilon GS 97.4 0.00019 4.2E-09 59.8 4.8 41 340-380 39-79 (118)
101 cd03044 GST_N_EF1Bgamma GST_N 97.4 2.9E-05 6.3E-10 59.8 -0.3 64 53-121 2-74 (75)
102 KOG1695|consensus 97.4 0.00036 7.8E-09 64.7 6.5 98 278-380 43-166 (206)
103 cd03180 GST_C_2 GST_C family, 97.4 0.00024 5.3E-09 57.8 4.8 38 341-378 45-82 (110)
104 cd03190 GST_C_ECM4_like GST_C 97.4 0.00021 4.5E-09 62.1 4.6 59 321-379 5-77 (142)
105 cd03039 GST_N_Sigma_like GST_N 97.3 3.2E-05 7E-10 58.8 -0.9 65 52-121 1-72 (72)
106 cd03179 GST_C_1 GST_C family, 97.3 0.00036 7.9E-09 56.3 5.0 40 340-379 44-83 (105)
107 PF02798 GST_N: Glutathione S- 97.3 2.8E-05 6.1E-10 60.3 -1.5 66 50-121 1-76 (76)
108 cd03187 GST_C_Phi GST_C family 97.3 0.00034 7.4E-09 57.7 4.9 40 341-380 47-86 (118)
109 cd03047 GST_N_2 GST_N family, 97.3 5.2E-05 1.1E-09 57.9 -0.6 64 52-120 1-73 (73)
110 cd03206 GST_C_7 GST_C family, 97.2 0.00019 4.1E-09 58.1 2.6 39 340-378 34-72 (100)
111 cd03186 GST_C_SspA GST_N famil 97.2 0.00038 8.2E-09 56.8 4.5 59 320-378 3-74 (107)
112 cd03182 GST_C_GTT2_like GST_C 97.2 0.00039 8.5E-09 57.4 4.3 38 342-379 52-89 (117)
113 PF00043 GST_C: Glutathione S- 97.2 0.00034 7.4E-09 55.5 3.7 41 340-380 29-69 (95)
114 TIGR00862 O-ClC intracellular 97.2 0.0007 1.5E-08 64.1 6.3 103 278-380 50-182 (236)
115 cd03178 GST_C_Ure2p_like GST_C 97.2 0.00031 6.6E-09 57.7 3.4 41 340-380 41-81 (113)
116 cd03185 GST_C_Tau GST_C family 97.2 0.00041 9E-09 58.1 4.1 40 340-379 36-75 (126)
117 cd03076 GST_N_Pi GST_N family, 97.2 5.9E-05 1.3E-09 57.9 -1.1 64 52-121 2-72 (73)
118 cd03191 GST_C_Zeta GST_C famil 97.1 0.00086 1.9E-08 55.9 5.5 38 342-379 47-86 (121)
119 cd03053 GST_N_Phi GST_N family 97.1 9.4E-05 2E-09 56.7 -0.6 65 52-121 2-75 (76)
120 cd03058 GST_N_Tau GST_N family 97.0 0.00013 2.9E-09 55.7 -0.2 66 52-123 1-74 (74)
121 PF13410 GST_C_2: Glutathione 97.0 0.00066 1.4E-08 50.9 3.6 43 341-383 8-50 (69)
122 TIGR02182 GRXB Glutaredoxin, G 97.0 0.0011 2.5E-08 61.1 5.9 96 279-380 39-181 (209)
123 cd03181 GST_C_EFB1gamma GST_C 97.0 0.0012 2.5E-08 55.1 4.8 41 340-380 41-81 (123)
124 cd03193 GST_C_Metaxin GST_C fa 96.9 0.0011 2.5E-08 52.2 3.8 42 340-381 20-61 (88)
125 cd03207 GST_C_8 GST_C family, 96.8 0.001 2.3E-08 53.8 3.4 41 340-380 31-71 (103)
126 cd03056 GST_N_4 GST_N family, 96.8 0.00026 5.6E-09 53.5 -0.7 64 52-120 1-73 (73)
127 PF13417 GST_N_3: Glutathione 96.7 0.00021 4.5E-09 55.0 -1.9 66 54-125 1-73 (75)
128 cd03042 GST_N_Zeta GST_N famil 96.7 0.00036 7.9E-09 52.7 -0.6 63 52-119 1-72 (73)
129 cd03061 GST_N_CLIC GST_N famil 96.6 0.0005 1.1E-08 55.5 0.2 56 64-125 30-88 (91)
130 cd03203 GST_C_Lambda GST_C fam 96.6 0.0021 4.6E-08 54.1 3.8 61 318-379 2-72 (120)
131 cd03204 GST_C_GDAP1 GST_C fami 96.6 0.0023 5E-08 53.6 3.8 41 340-380 30-80 (111)
132 cd03077 GST_N_Alpha GST_N fami 96.6 0.00038 8.3E-09 54.3 -0.9 65 52-124 2-77 (79)
133 KOG3027|consensus 96.4 0.0076 1.7E-07 55.3 6.5 67 154-220 176-247 (257)
134 cd00299 GST_C_family Glutathio 96.4 0.003 6.4E-08 49.8 3.5 40 341-380 38-77 (100)
135 cd03198 GST_C_CLIC GST_C famil 96.4 0.0033 7.2E-08 54.4 3.7 41 340-380 30-86 (134)
136 cd03051 GST_N_GTT2_like GST_N 96.4 0.00076 1.7E-08 50.8 -0.4 63 52-119 1-73 (74)
137 cd03055 GST_N_Omega GST_N fami 96.2 0.00096 2.1E-08 53.2 -0.6 66 48-119 15-88 (89)
138 cd03080 GST_N_Metaxin_like GST 96.1 0.0017 3.8E-08 49.8 0.4 60 51-123 1-74 (75)
139 cd03209 GST_C_Mu GST_C family, 95.9 0.0087 1.9E-07 50.1 3.7 41 340-380 36-76 (121)
140 KOG0406|consensus 95.9 0.014 3E-07 54.9 5.3 104 279-383 50-174 (231)
141 cd03075 GST_N_Mu GST_N family, 95.9 0.0022 4.7E-08 50.4 -0.1 66 53-123 2-82 (82)
142 cd03201 GST_C_DHAR GST_C famil 95.8 0.015 3.2E-07 49.2 5.0 38 340-377 31-69 (121)
143 cd03038 GST_N_etherase_LigE GS 95.8 0.0028 6E-08 49.7 0.4 56 64-124 24-84 (84)
144 cd03049 GST_N_3 GST_N family, 95.8 0.0017 3.6E-08 49.3 -1.0 64 52-119 1-72 (73)
145 cd03202 GST_C_etherase_LigE GS 95.8 0.0097 2.1E-07 50.4 3.6 42 339-380 58-99 (124)
146 cd03192 GST_C_Sigma_like GST_C 95.7 0.012 2.6E-07 47.5 3.9 40 340-379 40-81 (104)
147 cd03208 GST_C_Alpha GST_C fami 95.7 0.012 2.6E-07 50.8 4.0 38 343-380 43-82 (137)
148 cd03060 GST_N_Omega_like GST_N 95.7 0.0021 4.6E-08 48.7 -0.7 61 53-119 2-70 (71)
149 cd03043 GST_N_1 GST_N family, 95.6 0.0018 3.9E-08 49.6 -1.4 59 57-120 8-73 (73)
150 cd03037 GST_N_GRX2 GST_N famil 95.6 0.0029 6.4E-08 47.7 -0.3 63 52-121 1-71 (71)
151 KOG4244|consensus 95.6 0.0051 1.1E-07 58.5 1.1 63 158-220 206-272 (281)
152 cd03210 GST_C_Pi GST_C family, 95.5 0.016 3.5E-07 49.0 3.9 37 342-378 38-77 (126)
153 KOG3028|consensus 95.4 0.045 9.7E-07 53.3 7.1 64 158-221 166-234 (313)
154 cd03184 GST_C_Omega GST_C fami 95.3 0.02 4.4E-07 48.1 4.1 40 340-379 33-74 (124)
155 cd03195 GST_C_4 GST_C family, 95.3 0.022 4.9E-07 47.3 4.3 39 341-380 44-83 (114)
156 cd03183 GST_C_Theta GST_C fami 95.1 0.023 5.1E-07 47.5 3.8 40 340-379 46-86 (126)
157 cd03194 GST_C_3 GST_C family, 94.3 0.049 1.1E-06 45.4 3.7 39 341-380 43-84 (114)
158 cd03205 GST_C_6 GST_C family, 94.1 0.059 1.3E-06 43.2 3.7 38 340-380 38-75 (98)
159 PF13409 GST_N_2: Glutathione 94.0 0.0051 1.1E-07 46.7 -2.6 53 64-121 10-69 (70)
160 cd03040 GST_N_mPGES2 GST_N fam 93.5 0.0089 1.9E-07 45.8 -2.1 63 52-122 2-75 (77)
161 KOG2903|consensus 93.1 0.043 9.4E-07 52.2 1.3 41 340-380 204-246 (319)
162 cd03211 GST_C_Metaxin2 GST_C f 93.0 0.1 2.2E-06 44.4 3.5 42 340-381 58-99 (126)
163 cd03212 GST_C_Metaxin1_3 GST_C 93.0 0.1 2.2E-06 45.2 3.5 43 340-382 65-107 (137)
164 cd03197 GST_C_mPGES2 GST_C fam 92.9 0.085 1.8E-06 46.5 2.9 25 356-380 97-121 (149)
165 cd00570 GST_N_family Glutathio 92.4 0.032 6.9E-07 40.4 -0.5 63 52-119 1-70 (71)
166 PF04399 Glutaredoxin2_C: Glut 92.1 0.11 2.4E-06 44.8 2.5 65 155-224 59-124 (132)
167 COG0435 ECM4 Predicted glutath 91.8 0.18 3.8E-06 48.5 3.7 41 340-380 206-246 (324)
168 KOG3029|consensus 91.6 0.19 4.1E-06 48.4 3.7 61 160-220 293-354 (370)
169 KOG1422|consensus 90.3 0.75 1.6E-05 42.6 6.1 36 344-379 128-166 (221)
170 cd03199 GST_C_GRX2 GST_C famil 90.1 0.39 8.5E-06 41.2 3.9 65 155-224 60-125 (128)
171 KOG1668|consensus 89.7 0.091 2E-06 49.2 -0.3 59 161-225 10-68 (231)
172 cd03054 GST_N_Metaxin GST_N fa 89.4 0.14 3.1E-06 38.5 0.7 45 64-121 24-71 (72)
173 KOG4420|consensus 88.9 0.44 9.5E-06 45.5 3.7 40 342-381 208-251 (325)
174 cd03079 GST_N_Metaxin2 GST_N f 87.3 0.2 4.3E-06 38.9 0.3 54 56-121 14-73 (74)
175 COG2999 GrxB Glutaredoxin 2 [P 86.8 0.85 1.8E-05 41.3 4.0 110 107-225 54-208 (215)
176 PF11801 Tom37_C: Tom37 C-term 56.4 12 0.00025 33.6 3.2 37 160-196 113-153 (168)
177 PF04399 Glutaredoxin2_C: Glut 56.1 9.9 0.00021 32.8 2.6 41 340-381 60-100 (132)
178 KOG4244|consensus 53.9 6.6 0.00014 37.8 1.3 41 341-381 205-245 (281)
179 KOG3027|consensus 51.9 36 0.00078 31.8 5.6 44 340-383 178-221 (257)
180 cd03199 GST_C_GRX2 GST_C famil 51.6 26 0.00057 30.1 4.4 41 340-381 61-101 (128)
181 PF02798 GST_N: Glutathione S- 49.8 5.4 0.00012 30.3 0.0 29 276-304 41-76 (76)
182 TIGR02190 GlrX-dom Glutaredoxi 33.2 9.4 0.0002 29.2 -1.0 54 48-108 6-64 (79)
183 cd02976 NrdH NrdH-redoxin (Nrd 31.7 7.1 0.00015 28.3 -1.9 50 52-108 2-57 (73)
184 COG2999 GrxB Glutaredoxin 2 [P 30.6 1.3E+02 0.0028 27.6 5.6 41 341-382 144-184 (215)
185 PF11801 Tom37_C: Tom37 C-term 30.0 62 0.0013 29.0 3.6 38 344-381 113-154 (168)
186 PRK10638 glutaredoxin 3; Provi 24.7 11 0.00024 29.0 -2.0 50 52-108 4-59 (83)
187 KOG3029|consensus 24.4 39 0.00085 33.0 1.3 25 356-380 306-330 (370)
188 PRK10329 glutaredoxin-like pro 23.7 20 0.00043 27.9 -0.7 52 50-108 1-57 (81)
189 KOG0079|consensus 22.6 34 0.00073 30.4 0.4 19 5-23 90-108 (198)
190 TIGR02196 GlrX_YruB Glutaredox 22.5 14 0.00031 26.6 -1.7 50 51-107 1-56 (74)
191 PF09635 MetRS-N: MetRS-N bind 20.3 1.8E+02 0.0039 24.8 4.3 77 287-377 41-121 (122)
No 1
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.91 E-value=3e-25 Score=205.76 Aligned_cols=175 Identities=14% Similarity=0.222 Sum_probs=137.6
Q ss_pred ccceeecccccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccc-----cc--hHHHH---H
Q psy4819 51 FLDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKT-----EN--LYLWK---L 115 (387)
Q Consensus 51 ~~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~-----e~--~~l~~---i 115 (387)
||+||+.|++|+. |+|+++ |++|+. ..||+.+ +.+++|++|||.|+||.|.+ ++ ..+++ |
T Consensus 1 m~~Ly~~~~~~~~~v~~~L~e~---gl~~e~--~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI 75 (215)
T PRK13972 1 MIDLYFAPTPNGHKITLFLEEA---ELDYRL--IKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAI 75 (215)
T ss_pred CeEEEECCCCChHHHHHHHHHc---CCCcEE--EEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHH
Confidence 6899999999994 889984 899954 5588754 45678999999999998864 22 24554 7
Q ss_pred HHHhhhccccccccccccchhhHHHHHHHhhccccee---------e-----------hhhhhHHHHHHHHHhhhhhccc
Q psy4819 116 FQAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHIL---------H-----------ASVSQVTSHVLNELNQVFSKQS 175 (387)
Q Consensus 116 l~YLa~~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~---------g-----------~~a~~~l~~~L~~Le~~L~~~~ 175 (387)
++||+++|+ .|.|.++.+|+++++|+.|..+.++ . +.....+.+.+..||++|++++
T Consensus 76 ~~YL~~~~~---~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 152 (215)
T PRK13972 76 LLYLAEKTG---LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSP 152 (215)
T ss_pred HHHHHHhcC---CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCc
Confidence 999999985 3778889999999999998765433 0 1233467788999999999889
Q ss_pred eeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcEEEEEe
Q psy4819 176 FLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVVLFSI 235 (387)
Q Consensus 176 yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~~~~~ 235 (387)
|++||++|+|||++++.+...... . ...+.||+|.+|+++|.+||+|++++....+.+
T Consensus 153 ~l~Gd~~t~ADi~l~~~~~~~~~~-~-~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~~~~ 210 (215)
T PRK13972 153 WLGGENYSIADIACWPWVNAWTRQ-R-IDLAMYPAVKNWHERIRSRPATGQALLKAQLGD 210 (215)
T ss_pred cccCCCCCHHHHHHHHHHHHHhhc-C-CcchhCHHHHHHHHHHHhCHHHHHHHHHhcccc
Confidence 999999999999998876433322 1 124689999999999999999999887766655
No 2
>PLN02473 glutathione S-transferase
Probab=99.90 E-value=5e-25 Score=203.72 Aligned_cols=176 Identities=18% Similarity=0.296 Sum_probs=138.3
Q ss_pred cccceeecccc-cce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 50 EFLDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 50 ~~~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
|.||||+.|++ |+. ++|+++ |.+|+. ..+|+.. +.+++|+++||.|+||.+.+++..+++ |++||+
T Consensus 1 ~~~kLy~~~~s~~~~rv~~~L~e~---gi~ye~--~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~ 75 (214)
T PLN02473 1 MVVKVYGQIKAANPQRVLLCFLEK---GIEFEV--IHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYA 75 (214)
T ss_pred CceEEecCCCCCchHHHHHHHHHc---CCCceE--EEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHH
Confidence 46899999965 885 888884 899954 5588864 567789999999999888666554443 799999
Q ss_pred hccccc-cccccccchhhHHHHHHHhhccccee----------------e--------hhhhhHHHHHHHHHhhhhhccc
Q psy4819 121 SANVKR-SDILWSSKEEEFLIKQWIEYTNSHIL----------------H--------ASVSQVTSHVLNELNQVFSKQS 175 (387)
Q Consensus 121 ~~y~~~-~~L~g~~~~erA~v~~Wl~f~~s~l~----------------g--------~~a~~~l~~~L~~Le~~L~~~~ 175 (387)
++|++. ..|+|.++.+++++++|+++..+.+. + +.....+.+.++.||++|++++
T Consensus 76 ~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 155 (214)
T PLN02473 76 TKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNR 155 (214)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999753 36999999999999999987755331 0 1234567788999999999889
Q ss_pred eeeeccchhhHHHHHHHHHHHHHHhh-hcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 176 FLVADRFTLADVFMYYSLISVFKELT-LQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 176 yLvGd~~TlADi~l~~~l~~~~~~l~-~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
|++||++|+|||++++.+.|+..... ....++||+|.+|+++|.+||+|++++..
T Consensus 156 ~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 156 YLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred cccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 99999999999999998887643211 12357899999999999999999987643
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.90 E-value=8.4e-25 Score=202.46 Aligned_cols=171 Identities=10% Similarity=0.145 Sum_probs=137.2
Q ss_pred ccceeecccc-cce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhcc
Q psy4819 51 FLDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSAN 123 (387)
Q Consensus 51 ~~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y 123 (387)
||+||..|++ |++ ++|+++ |++|+. +.||+. +.+++|+++||.|.||.+.+++..+++ |++||+++|
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~---gl~~e~--~~v~~~-~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~ 83 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEK---GVSVEI--EQVEKD-NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERF 83 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHC---CCCCEE--EeCCcc-cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhC
Confidence 6899998854 774 888984 899954 568874 457789999999999888666555554 799999999
Q ss_pred ccccccccccchhhHHHHHHHhhccccee--------e-----hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHH
Q psy4819 124 VKRSDILWSSKEEEFLIKQWIEYTNSHIL--------H-----ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMY 190 (387)
Q Consensus 124 ~~~~~L~g~~~~erA~v~~Wl~f~~s~l~--------g-----~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~ 190 (387)
+. ..|+|.++.+|+++++|+.++.+.++ + +.....+...++.+|++|++++|++|+++|+||++++
T Consensus 84 ~~-~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~ 162 (211)
T PRK09481 84 PH-PPLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLA 162 (211)
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHH
Confidence 86 57999999999999999988765432 1 3345667888999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc-hhhhhhHhhhhhhccCCCccccCCc
Q psy4819 191 YSLISVFKELTLQS-KEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 191 ~~l~~~~~~l~~~~-~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
+.+.+.... +.+. .+.||+|.+|+++|.+||+|++++.
T Consensus 163 ~~~~~~~~~-~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~ 201 (211)
T PRK09481 163 PLLWRLPVL-GIELSGPGAKELKGYMTRVFERDSFLASLT 201 (211)
T ss_pred HHHHHHHhc-CCCCCCCCChhHHHHHHHHhccHHHHHHcC
Confidence 988665432 2222 2479999999999999999998875
No 4
>PLN02395 glutathione S-transferase
Probab=99.90 E-value=9.3e-25 Score=201.88 Aligned_cols=177 Identities=15% Similarity=0.203 Sum_probs=140.3
Q ss_pred cccceeecccccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 50 EFLDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 50 ~~~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
|.++||..+++|+. ++|+++ |++|+. +.+|+.. ..+++|+++||.|+||.|.+++..+++ |++||++
T Consensus 1 ~~~~ly~~~~~~~~rv~~~L~e~---gl~~e~--~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~ 75 (215)
T PLN02395 1 MVLKVYGPAFASPKRALVTLIEK---GVEFET--VPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAE 75 (215)
T ss_pred CeEEEEcCCcCcHHHHHHHHHHc---CCCceE--EEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHH
Confidence 45899999999885 788884 899954 5688753 456789999999999998766655554 7999999
Q ss_pred ccccc-cccccccchhhHHHHHHHhhccccee----------------e--------hhhhhHHHHHHHHHhhhhhccce
Q psy4819 122 ANVKR-SDILWSSKEEEFLIKQWIEYTNSHIL----------------H--------ASVSQVTSHVLNELNQVFSKQSF 176 (387)
Q Consensus 122 ~y~~~-~~L~g~~~~erA~v~~Wl~f~~s~l~----------------g--------~~a~~~l~~~L~~Le~~L~~~~y 176 (387)
+|+.. ..|+|.++.+++++++|++|.++.++ + +...+.+.+.++.||++|++++|
T Consensus 76 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~ 155 (215)
T PLN02395 76 KYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKY 155 (215)
T ss_pred HcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99752 36999999999999999998765432 0 12345677889999999998899
Q ss_pred eeeccchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhccCCCccccCCcEE
Q psy4819 177 LVADRFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVV 231 (387)
Q Consensus 177 LvGd~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~ 231 (387)
++|+++|+||+++++++.+.... .....++.||+|.+|+++|.+||+++++++..
T Consensus 156 l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~ 211 (215)
T PLN02395 156 LAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKY 211 (215)
T ss_pred ccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHh
Confidence 99999999999999887765321 11223568999999999999999999987654
No 5
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=99.90 E-value=1.2e-25 Score=184.26 Aligned_cols=96 Identities=14% Similarity=0.232 Sum_probs=70.7
Q ss_pred eeccCCCCccccccchHHHHHHHHhhhccccccccccccchh---hHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhh
Q psy4819 279 TITNSNDIKPLKTENLYLWKLFQAISSANVKRSDILWSSKEE---EFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVF 355 (387)
Q Consensus 279 k~k~Pl~~lP~~~f~l~e~k~~Y~n~~~~~~~~~llg~~~~~---sa~i~qW~~y~~~~~~~~~~~n~~~~~lqrLd~~L 355 (387)
|+||||+.||+++|+||+|||.|||+++...++++||+++|. |.|.+.| +|+++++..||++|+++||+|||| ++
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~~~~a~p~Fwe~~d~eg~Slw~~~Y-ky~~El~~~fmt~Nli~Gf~QRle-~~ 78 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDTRTVAMPWFWENFDPEGYSLWFCDY-KYNDELTMTFMTCNLIGGFFQRLE-KL 78 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-GGGTHHHHHHSS--TTT-EEEEE---S-GGG---STTHHHHHHHHHHHGG-GT
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCchhhHHHHHHHhCCccccEEEEEec-CChhhhccceeehhHHHHHHHHHH-HH
Confidence 689999999999999999999999999977789999999998 9999999 799999999999999999999999 89
Q ss_pred hccceeee------ccchhhHHHHHHh
Q psy4819 356 SKQSFLVA------DRFTLADVFMYYS 376 (387)
Q Consensus 356 ~k~tFlVg------~~lTlADI~v~~~ 376 (387)
||++|++. .+.+|.+|||++|
T Consensus 79 rK~aFg~~~v~G~~~~~~I~Gvwv~rG 105 (107)
T PF00647_consen 79 RKYAFGSMSVFGEDNNSDISGVWVFRG 105 (107)
T ss_dssp GGGEEE--EEES-STT-EEEEEEEESS
T ss_pred hhhheeEEEEEecCCCCceEEEEEEec
Confidence 99999983 5788999988876
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.90 E-value=1.6e-24 Score=198.03 Aligned_cols=171 Identities=17% Similarity=0.364 Sum_probs=138.2
Q ss_pred cceeecccccce---eeeeeecCCCceeEEEEEEeecCC---CCCcceeeeccCCCCcccc-ccchHHHH---HHHHhhh
Q psy4819 52 LDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN---QDPVQYSTITNSNDIKPLK-TENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~---~~~~~yl~inp~~~v~pl~-~e~~~l~~---il~YLa~ 121 (387)
|+||+.+++||. |+|+++ |++|+. ..||+.. +.+++|+++||.|+||.+. +++..+++ |++||++
T Consensus 1 m~l~~~~~s~~~~~~~~L~~~---gi~~e~--~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~ 75 (201)
T PRK10542 1 MKLFYKPGACSLASHITLRES---GLDFTL--VSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLAD 75 (201)
T ss_pred CceeecccHHHHHHHHHHHHc---CCCceE--EEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHH
Confidence 699999999995 888884 999955 5688864 3457899999999999886 45556664 7899999
Q ss_pred ccccccccc-cccchhhHHHHHHHhhccccee--------e-------hhhhhHHHHHHHHHhhhhhccceeeeccchhh
Q psy4819 122 ANVKRSDIL-WSSKEEEFLIKQWIEYTNSHIL--------H-------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLA 185 (387)
Q Consensus 122 ~y~~~~~L~-g~~~~erA~v~~Wl~f~~s~l~--------g-------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlA 185 (387)
+|+. ..|+ |.++.+|+++++|+.+..+.++ + ....+.+.+.|+.+|++|++++||+|+++|+|
T Consensus 76 ~~~~-~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~A 154 (201)
T PRK10542 76 SVPD-RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIA 154 (201)
T ss_pred hCcc-cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHH
Confidence 9986 4555 6778899999999998876554 0 22456788899999999998999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 186 DVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 186 Di~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
||++++.+.|.... +.. .+.||+|.+|+++|.++|+|++++..
T Consensus 155 Di~l~~~~~~~~~~-~~~-~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 155 DAYLFTVLRWAYAV-KLN-LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred hHHHHHHHHHhhcc-CCC-cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 99999988876442 222 35799999999999999999988754
No 7
>PRK11752 putative S-transferase; Provisional
Probab=99.86 E-value=1.8e-22 Score=193.68 Aligned_cols=175 Identities=16% Similarity=0.290 Sum_probs=134.8
Q ss_pred ccceeecccccce---eeeeee--cCC-CceeEEEEEEeecCC--CCCcceeeeccCCCCccccccc----hHHHH---H
Q psy4819 51 FLDLRVLQGSCEQ---ILFEKQ--SGG-GGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTEN----LYLWK---L 115 (387)
Q Consensus 51 ~~~Ly~~pGacs~---i~lee~--~~~-G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~----~~l~~---i 115 (387)
+|+||+.+++|++ |+|+|+ .+. |++|+ ...||+.. +.+++|+++||.|.||.+.+++ ..|++ |
T Consensus 44 ~~~Ly~~~s~~~~rV~i~L~e~~~~~~~gl~ye--~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLGTPNGQKVTIMLEELLALGVKGAEYD--AWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCCCCchHHHHHHHHHHHhccCCCCceE--EEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHH
Confidence 7999999999995 888872 122 77885 46688754 4567899999999999886542 34554 7
Q ss_pred HHHhhhccccccccccccchhhHHHHHHHhhccccee-------------e-------hhhhhHHHHHHHHHhhhhhccc
Q psy4819 116 FQAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHIL-------------H-------ASVSQVTSHVLNELNQVFSKQS 175 (387)
Q Consensus 116 l~YLa~~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~-------------g-------~~a~~~l~~~L~~Le~~L~~~~ 175 (387)
++||+++|+ .|+|.++.+|+++++|+.|..+.+. . +....++.+.|+.||++|++++
T Consensus 122 l~YL~~~~~---~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG---AFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHE 198 (264)
T ss_pred HHHHHHhcC---CcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999986 4999999999999999998765321 0 1223457788999999999889
Q ss_pred eeeeccchhhHHHHHHHHHHHHHH--h---hhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 176 FLVADRFTLADVFMYYSLISVFKE--L---TLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 176 yLvGd~~TlADi~l~~~l~~~~~~--l---~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
||+||++|+|||++++.+.++... . +....+.||+|.+|+++|.+||+|++++..
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~ 258 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIV 258 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhc
Confidence 999999999999999887665321 1 111246899999999999999999987643
No 8
>PRK15113 glutathione S-transferase; Provisional
Probab=99.85 E-value=2.7e-22 Score=186.11 Aligned_cols=170 Identities=11% Similarity=0.142 Sum_probs=132.7
Q ss_pred ccceeecc---cccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHh
Q psy4819 51 FLDLRVLQ---GSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAI 119 (387)
Q Consensus 51 ~~~Ly~~p---Gacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YL 119 (387)
||+||..+ ++|++ ++|+++ |++|+. ..+|+.. +..++|+++||.|+||.+.+++..+++ |++||
T Consensus 5 ~~~Ly~~~~~~s~~~~rv~~~l~e~---gi~~e~--~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 5 AITLYSDAHFFSPYVMSAFVALQEK---GLPFEL--KTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred eEEEEeCCCCCCchHHHHHHHHHHc---CCCCeE--EEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 57999976 34553 888884 899954 5688854 456789999999999998766655554 79999
Q ss_pred hhcccccc--ccccccchhhHHHHHHHhhccccee--------------------ehhhhhHHHHHHHHHhhhhhc-cce
Q psy4819 120 SSANVKRS--DILWSSKEEEFLIKQWIEYTNSHIL--------------------HASVSQVTSHVLNELNQVFSK-QSF 176 (387)
Q Consensus 120 a~~y~~~~--~L~g~~~~erA~v~~Wl~f~~s~l~--------------------g~~a~~~l~~~L~~Le~~L~~-~~y 176 (387)
+++|++.. .|+|.++.+|+++++|+.|..++++ .+...+.+.+.++.+|++|++ +.|
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 159 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPN 159 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 99998632 2999999999999999998865432 033556788899999999975 469
Q ss_pred eeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 177 LVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 177 LvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
++|+ +|+|||++++.+.++... +... .|+|.+|++||.+||+|+++++.
T Consensus 160 l~G~-~TlADi~l~~~l~~~~~~-~~~~---~p~l~~~~~r~~~rp~~~~~~~~ 208 (214)
T PRK15113 160 LFGE-WCIADTDLALMLNRLVLH-GDEV---PERLADYATFQWQRASVQRWLAL 208 (214)
T ss_pred eeCC-ccHHHHHHHHHHHHHHHc-CCCC---CHHHHHHHHHHhcCHHHHHHHHH
Confidence 9996 999999999998876432 2221 29999999999999999987754
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=7.4e-22 Score=182.41 Aligned_cols=166 Identities=18% Similarity=0.307 Sum_probs=133.7
Q ss_pred cceeecccc--cce--eeeeeecCCCceeEEEEEEeecCC-CCCcceeeeccCCCCccccccch-HHHH---HHHHhhhc
Q psy4819 52 LDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDN-QDPVQYSTITNSNDIKPLKTENL-YLWK---LFQAISSA 122 (387)
Q Consensus 52 ~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~-~~~~~yl~inp~~~v~pl~~e~~-~l~~---il~YLa~~ 122 (387)
|+||+.|+| |.. +++.+ .|.+|+. ..||+.. +.+++|+++||.|+||.+.+++. .+|+ |++||+++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e---~g~~ye~--~~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~ 75 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEE---KGLPYEI--VLVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAER 75 (211)
T ss_pred CeeecCCCCcchHHHHHHHHH---cCCCceE--EEeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhh
Confidence 689999999 333 66666 4889954 6688875 67789999999999998876654 5665 79999999
Q ss_pred cccccccccccch---hhHHHHHHHhhcccceee---------------------hhhhhHHHHHHHHHhhhhhccceee
Q psy4819 123 NVKRSDILWSSKE---EEFLIKQWIEYTNSHILH---------------------ASVSQVTSHVLNELNQVFSKQSFLV 178 (387)
Q Consensus 123 y~~~~~L~g~~~~---erA~v~~Wl~f~~s~l~g---------------------~~a~~~l~~~L~~Le~~L~~~~yLv 178 (387)
|+... |+|.++. +|+++.+|+.|..+.++. +.....+...+..+|.+|++++|++
T Consensus 76 ~~~~~-l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 154 (211)
T COG0625 76 YPGPP-LLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLA 154 (211)
T ss_pred CCCCC-cCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 99733 9998874 899999999999776650 2345668889999999999999999
Q ss_pred eccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccc
Q psy4819 179 ADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVR 225 (387)
Q Consensus 179 Gd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k 225 (387)
||++|+||+++++.+.++... +.. .+.||++.+|++||.++|+++
T Consensus 155 G~~~tiAD~~~~~~~~~~~~~-~~~-~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 155 GDRFTIADIALAPLLWRLALL-GEE-LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CCCCCHHHHHHHHHHHHhhhc-Ccc-cccChHHHHHHHHHHcCCchh
Confidence 999999999999998875432 222 267999999999999999965
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.85 E-value=1.1e-21 Score=180.61 Aligned_cols=171 Identities=14% Similarity=0.166 Sum_probs=134.1
Q ss_pred cee-ecccccce---eeeeeecCCCceeEEEEEEeecC---CCCCcceeeeccCCCCccccccchHHHH---HHHHhhhc
Q psy4819 53 DLR-VLQGSCEQ---ILFEKQSGGGGNFQISCRILDLD---NQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSA 122 (387)
Q Consensus 53 ~Ly-~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~---~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~ 122 (387)
+|| +.+++|+. ++|++ .|++|+. ..+++. .+.+++|+.+||.|.+|.+.+++..+++ |+.||+++
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~---~gi~~~~--~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~ 75 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALAL---KGIDYEY--VPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEET 75 (210)
T ss_pred CcccCCCCCchHHHHHHHHH---CCCCceE--EecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHh
Confidence 477 55667884 77887 4899955 557762 2456789999999999988766655554 78999999
Q ss_pred cccccccccccchhhHHHHHHHhhccccee---------------e-------hhhhhHHHHHHHHHhhhhhcc--ceee
Q psy4819 123 NVKRSDILWSSKEEEFLIKQWIEYTNSHIL---------------H-------ASVSQVTSHVLNELNQVFSKQ--SFLV 178 (387)
Q Consensus 123 y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~---------------g-------~~a~~~l~~~L~~Le~~L~~~--~yLv 178 (387)
|+. .+|+|.++.+++++++|+.++.++++ + +...+.+.+.|+.||++|+++ +||+
T Consensus 76 ~~~-~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~ 154 (210)
T TIGR01262 76 YPD-PPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCV 154 (210)
T ss_pred CCC-CCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEee
Confidence 986 57999999999999999998865432 0 112345778899999999863 5999
Q ss_pred eccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcEE
Q psy4819 179 ADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVV 231 (387)
Q Consensus 179 Gd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~ 231 (387)
|+++|+|||++++.+.++... .. ..++||+|.+|+++|.+||+|++++...
T Consensus 155 G~~~T~ADi~~~~~l~~~~~~-~~-~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 155 GDTPTLADLCLVPQVYNAERF-GV-DLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCCCCHHHHHHHHHHHHHHHc-CC-CcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 999999999999999886543 22 2368999999999999999999988754
No 11
>KOG0867|consensus
Probab=99.83 E-value=4.8e-21 Score=179.81 Aligned_cols=174 Identities=22% Similarity=0.344 Sum_probs=141.6
Q ss_pred cccceeecccc-cce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 50 EFLDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 50 ~~~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
|.|+||+.+++ ++. |++.+ .|++|+ ...+|+.+ |.+++|+++||.|+||.+.+++..+|+ |+.||+
T Consensus 1 ~~~~ly~~~~s~~~r~vl~~~~~---~~l~~e--~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~ 75 (226)
T KOG0867|consen 1 MKLKLYGHLGSPPARAVLIAAKE---LGLEVE--LKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLA 75 (226)
T ss_pred CCceEeecCCCcchHHHHHHHHH---cCCcee--EEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHH
Confidence 45899999988 342 66666 488885 45688865 788899999999999999888777775 799999
Q ss_pred hccccccc-cccccchhhHHHHHHHhhccccee--------------e--------hhhhhHHHHHHHHHhhhhhcccee
Q psy4819 121 SANVKRSD-ILWSSKEEEFLIKQWIEYTNSHIL--------------H--------ASVSQVTSHVLNELNQVFSKQSFL 177 (387)
Q Consensus 121 ~~y~~~~~-L~g~~~~erA~v~~Wl~f~~s~l~--------------g--------~~a~~~l~~~L~~Le~~L~~~~yL 177 (387)
++|..... |+|.++.+||.|++|++|.++.+. + ......+...+..+|.+|.++.|+
T Consensus 76 ~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl 155 (226)
T KOG0867|consen 76 EKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYL 155 (226)
T ss_pred HHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcc
Confidence 99972234 999999999999999998876432 1 456778899999999999999999
Q ss_pred eeccchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 178 VADRFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 178 vGd~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
+|+++|+||+.+++.+..+... .+.....+||++.||++++.++|++++..
T Consensus 156 ~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~ 207 (226)
T KOG0867|consen 156 AGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEAN 207 (226)
T ss_pred cCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHH
Confidence 9999999999999999876322 32445679999999999999998866543
No 12
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.82 E-value=7.4e-21 Score=174.31 Aligned_cols=170 Identities=12% Similarity=0.073 Sum_probs=130.9
Q ss_pred cceeecc-cccce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccc-ccchHHHH---HHHHhhhcc
Q psy4819 52 LDLRVLQ-GSCEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLK-TENLYLWK---LFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~p-Gacs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~-~e~~~l~~---il~YLa~~y 123 (387)
|+||..+ +.++. ++|++ .|++|+. ..+++.. .+..+..+||.|+||.++ +++..+++ |+.||++++
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~---~gv~ye~--~~~~~~~-~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~ 74 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLE---KGITFEF--VNELPYN-ADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLN 74 (202)
T ss_pred CeeecCCCCchHHHHHHHHHH---cCCCCeE--EecCCCC-CchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhC
Confidence 5889876 44663 88888 4899964 4466533 234567789999998886 45555554 789999998
Q ss_pred ccccccccccchhhHHHHHHHhhccccee------------e--------hhhhhHHHHHHHHHhhhhhccceeeeccch
Q psy4819 124 VKRSDILWSSKEEEFLIKQWIEYTNSHIL------------H--------ASVSQVTSHVLNELNQVFSKQSFLVADRFT 183 (387)
Q Consensus 124 ~~~~~L~g~~~~erA~v~~Wl~f~~s~l~------------g--------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~T 183 (387)
++ ..|+|.++.+++++++|+.|..+.+. + +.....+.+.|+.||++|.+++ ++||++|
T Consensus 75 ~~-~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t 152 (202)
T PRK10357 75 VA-PAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVN 152 (202)
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcC
Confidence 76 57999999999999999888765332 0 2345678889999999998888 9999999
Q ss_pred hhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 184 LADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 184 lADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
+|||++++.+.|+... .+..+..+||++.+|++||.+||+|+++..
T Consensus 153 ~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 153 LATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 9999999999876432 333334689999999999999999998764
No 13
>PLN02378 glutathione S-transferase DHAR1
Probab=99.76 E-value=2.5e-19 Score=166.30 Aligned_cols=163 Identities=15% Similarity=0.226 Sum_probs=121.7
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhccccccccccccchhhHHH
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSANVKRSDILWSSKEEEFLI 140 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y~~~~~L~g~~~~erA~v 140 (387)
++|+++ |++|+. +.||+.. .+.+|+++||.|.||.+.+++..+++ |++||+++|++ ..| .++.+++++
T Consensus 28 ~~L~e~---gl~~e~--~~v~~~~-~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~-~~l--~~~~~~a~i 98 (213)
T PLN02378 28 LTLEEK---SLTYKI--HLINLSD-KPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD-PPL--KTPAEFASV 98 (213)
T ss_pred HHHHHc---CCCCeE--EEeCccc-CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC-CCC--CCHHHHHHH
Confidence 888884 899954 5688864 46689999999999887665555554 78999999986 344 467788998
Q ss_pred HHHHhhccccee-----ehhhhhHHHHHHHHHhhhhh--ccceeeeccchhhHHHHHHHHHHHHHHh----hhcchhhhh
Q psy4819 141 KQWIEYTNSHIL-----HASVSQVTSHVLNELNQVFS--KQSFLVADRFTLADVFMYYSLISVFKEL----TLQSKEKHQ 209 (387)
Q Consensus 141 ~~Wl~f~~s~l~-----g~~a~~~l~~~L~~Le~~L~--~~~yLvGd~~TlADi~l~~~l~~~~~~l----~~~~~~~~P 209 (387)
++++......+. .+.....+.+.|..||++|+ +++|++||++|+||+++++.+.++.... .....+.||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p 178 (213)
T PLN02378 99 GSNIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFP 178 (213)
T ss_pred HHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhH
Confidence 877643211111 12344567788999999997 4689999999999999999987643211 112246899
Q ss_pred hHhhhhhhccCCCccccCCcEEEEEe
Q psy4819 210 HVSRWFNHVQSLPEVRLGNPVVLFSI 235 (387)
Q Consensus 210 ~L~rw~~rv~~rP~~k~~l~~~~~~~ 235 (387)
+|.+|+++|.+||++++++....++-
T Consensus 179 ~l~~w~~~~~~rpa~~~~~~~~~~~~ 204 (213)
T PLN02378 179 HVHNYMKTLFSLDSFEKTKTEEKYVI 204 (213)
T ss_pred HHHHHHHHHhcCCCeecccCChHHHH
Confidence 99999999999999999887765443
No 14
>KOG1627|consensus
Probab=99.72 E-value=2e-19 Score=153.25 Aligned_cols=98 Identities=13% Similarity=0.147 Sum_probs=89.8
Q ss_pred cCCCCccccccchHHHHHHHHhhhccccccccccccchh---hHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhcc
Q psy4819 282 NSNDIKPLKTENLYLWKLFQAISSANVKRSDILWSSKEE---EFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQ 358 (387)
Q Consensus 282 ~Pl~~lP~~~f~l~e~k~~Y~n~~~~~~~~~llg~~~~~---sa~i~qW~~y~~~~~~~~~~~n~~~~~lqrLd~~L~k~ 358 (387)
+||+.+|++||+||||||+|||+++..++.|+||++++. |+|.++| +|++++...||+||+++|++|||| .+||+
T Consensus 1 ~pl~~lp~~~Fvldd~kr~ySn~dt~~~a~P~f~e~~d~e~ys~w~~~Y-ky~eeL~~~fms~nli~g~~qrl~-~~rk~ 78 (160)
T KOG1627|consen 1 DPLDLLPKSTFVLDDWKRKYSNEDTREVALPWFWEHFDPEGYSLWKVDY-KYNEELTLTFMSCNLIGGFFQRLD-KSRKY 78 (160)
T ss_pred CchhhCCCCccchhhhhhhhcccccccccchHHHHHhCcccceeeeccc-cCchHHHHHHHHhhhhhHHHHHHH-HHHHh
Confidence 699999999999999999999999986789999999998 9999999 999999999999999999999999 57999
Q ss_pred ceeee------ccchhhHHHHHHhHhhhh
Q psy4819 359 SFLVA------DRFTLADVFMYYSLISVF 381 (387)
Q Consensus 359 tFlVg------~~lTlADI~v~~~l~~~~ 381 (387)
.|+.. ...||.++||+++-..++
T Consensus 79 ~f~~~~~~g~~~~~~i~g~~~~rg~ela~ 107 (160)
T KOG1627|consen 79 AFGSMVLFGENGNSTISGAWVFRGQELAP 107 (160)
T ss_pred hheeEEEeccCCCCcceEEEEEecccccc
Confidence 98863 689999999998765444
No 15
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.72 E-value=3.1e-18 Score=157.90 Aligned_cols=166 Identities=12% Similarity=0.139 Sum_probs=116.6
Q ss_pred cccceeecc-cccce---eeeeeecCCCceeEEEEEEeecCCCCCccee--------eeccCCCCccccccchHHHH---
Q psy4819 50 EFLDLRVLQ-GSCEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYS--------TITNSNDIKPLKTENLYLWK--- 114 (387)
Q Consensus 50 ~~~~Ly~~p-Gacs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl--------~inp~~~v~pl~~e~~~l~~--- 114 (387)
+.++|||.| ++|+. ++|++ .|.+|+. +.++ .+.+ +|+ .+||.|.+|.+.+++..+++
T Consensus 3 ~~~~L~y~~~~~~~~~vrl~L~~---~gi~ye~--~~~~--~~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~A 74 (205)
T PTZ00057 3 EEIVLYYFDARGKAELIRLIFAY---LGIEYTD--KRFG--ENGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQA 74 (205)
T ss_pred CceEEEecCCCcchHHHHHHHHH---cCCCeEE--Eecc--ccch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHH
Confidence 458999986 55773 78888 4899954 3332 2222 332 47888888887665555554
Q ss_pred HHHHhhhccccccccccccchhhHHHHHHHhhccc-cee----e---------hhhhhHHHHHHHHHhhhhhcc--ceee
Q psy4819 115 LFQAISSANVKRSDILWSSKEEEFLIKQWIEYTNS-HIL----H---------ASVSQVTSHVLNELNQVFSKQ--SFLV 178 (387)
Q Consensus 115 il~YLa~~y~~~~~L~g~~~~erA~v~~Wl~f~~s-~l~----g---------~~a~~~l~~~L~~Le~~L~~~--~yLv 178 (387)
|+.||+++|+ +.|.+. ++++..|+.+... +++ . +...+.+.+.+..||++|+++ +|++
T Consensus 75 I~~YLa~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~ 148 (205)
T PTZ00057 75 IVRYLSKKYK----ICGESE--LNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKWSGYFENILKKNHCNYFV 148 (205)
T ss_pred HHHHHHHHcC----CCCCCH--HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Confidence 7999999986 335444 4444455544431 221 0 234567888999999999764 7999
Q ss_pred eccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 179 ADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 179 Gd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
||++|+||++++..+.+..... +...+.||+|.+|++||.++|++++++++
T Consensus 149 Gd~~T~AD~~l~~~~~~~~~~~-~~~l~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 149 GDNLTYADLAVFNLYDDIETKY-PNSLKNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred CCcccHHHHHHHHHHHHHHHhC-hhhhccChhHHHHHHHHHhChHHHHHHHh
Confidence 9999999999999887754222 23346899999999999999999998754
No 16
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.72 E-value=5.8e-18 Score=162.50 Aligned_cols=158 Identities=14% Similarity=0.213 Sum_probs=118.9
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhccccccccccccchhhHHH
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSANVKRSDILWSSKEEEFLI 140 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y~~~~~L~g~~~~erA~v 140 (387)
++|+++ |++|+. ..||+.. .+.+|+.+||.|.||.+.+++..+++ |++||+++|++ ..| .++.+++++
T Consensus 81 i~L~ek---gi~ye~--~~vdl~~-~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~-~~L--~~~~era~i 151 (265)
T PLN02817 81 LTLEEK---HLPYDM--KLVDLTN-KPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPD-PPL--ATPPEKASV 151 (265)
T ss_pred HHHHHc---CCCCEE--EEeCcCc-CCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC-CCC--CCHHHHHHH
Confidence 788884 899954 5688864 56789999999999888665544443 79999999987 345 367889999
Q ss_pred HHHHhhccccee-----ehhhhhHHHHHHHHHhhhhhc-cceeeeccchhhHHHHHHHHHHHHHHh----hhcchhhhhh
Q psy4819 141 KQWIEYTNSHIL-----HASVSQVTSHVLNELNQVFSK-QSFLVADRFTLADVFMYYSLISVFKEL----TLQSKEKHQH 210 (387)
Q Consensus 141 ~~Wl~f~~s~l~-----g~~a~~~l~~~L~~Le~~L~~-~~yLvGd~~TlADi~l~~~l~~~~~~l----~~~~~~~~P~ 210 (387)
++|+......+. ++...+.+...+..||++|++ ++|++|+++|+|||++++.+.++...+ +....+.||+
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~ 231 (265)
T PLN02817 152 GSKIFSTFIGFLKSKDPGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPF 231 (265)
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHH
Confidence 998753321111 122345677889999999974 689999999999999999887653211 1122468999
Q ss_pred HhhhhhhccCCCccccCCcE
Q psy4819 211 VSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 211 L~rw~~rv~~rP~~k~~l~~ 230 (387)
|.+|+++|.++|+|++++..
T Consensus 232 L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 232 VKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHhcchhHhhcCCC
Confidence 99999999999999988763
No 17
>PLN02907 glutamate-tRNA ligase
Probab=99.71 E-value=6.3e-18 Score=181.24 Aligned_cols=151 Identities=17% Similarity=0.206 Sum_probs=114.6
Q ss_pred cccceeecccccce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccc-cchHHHH---HHHHhhhc
Q psy4819 50 EFLDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKT-ENLYLWK---LFQAISSA 122 (387)
Q Consensus 50 ~~~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~-e~~~l~~---il~YLa~~ 122 (387)
|.|+||+.|++|+. +++++ .|++|+... .+|.|.||.+.+ ++..+++ |++||++.
T Consensus 1 ~~~kLy~~~~S~~~~v~~~L~~---lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~ 62 (722)
T PLN02907 1 MEAKLSFPPDSPPLAVIAAAKV---AGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARS 62 (722)
T ss_pred CeEEEEECCCCChHHHHHHHHH---cCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHh
Confidence 34899999999995 66766 488885421 134555655532 3322222 79999999
Q ss_pred cccccccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hh
Q psy4819 123 NVKRSDILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LT 201 (387)
Q Consensus 123 y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~g~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~ 201 (387)
|+. ..|+|.++.+++++++|+.|+..... ...+...++.||++|+.++||+|+++|+|||++++.+...... ..
T Consensus 63 ~p~-~~L~p~d~~erAqV~qWL~~~~~~~~----~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~ 137 (722)
T PLN02907 63 ASL-PGFYGQDAFESSQVDEWLDYAPTFSS----GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWES 137 (722)
T ss_pred CCC-cCCCCCCHHHHHHHHHHHHHHhhccc----HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhc
Confidence 986 57999999999999999999865432 2356788999999999999999999999999999887654111 12
Q ss_pred hcchhhhhhHhhhhhhccCCCc
Q psy4819 202 LQSKEKHQHVSRWFNHVQSLPE 223 (387)
Q Consensus 202 ~~~~~~~P~L~rw~~rv~~rP~ 223 (387)
....+.||||.||+++|.++|+
T Consensus 138 ~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 138 LRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred ccccccCHHHHHHHHHHHhCCC
Confidence 2234689999999999999999
No 18
>KOG0406|consensus
Probab=99.69 E-value=2.7e-17 Score=152.79 Aligned_cols=176 Identities=14% Similarity=0.177 Sum_probs=136.8
Q ss_pred ccccee-ecccccc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccc-cchHHHH---HHHHhhh
Q psy4819 50 EFLDLR-VLQGSCE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKT-ENLYLWK---LFQAISS 121 (387)
Q Consensus 50 ~~~~Ly-~~pGacs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~-e~~~l~~---il~YLa~ 121 (387)
+.++|| +.+...+ +|+|..+ |.+| ++.-+|+.+ +|..++..||+.+.+|++. .+-.++| |++||.+
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~K---gI~y--E~veedl~~-Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe 81 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLK---GIPY--EYVEEDLTN-KSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDE 81 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhc---CCce--EEEecCCCC-CCHHHHHhccccccCCEEEECCceehhhHHHHHHHHh
Confidence 346666 4555555 3999985 8999 556677766 8888999997777777644 4444454 6899999
Q ss_pred ccccccccccccchhhHHHHHHHhhccccee-----------e---hhhhhHHHHHHHHHhhhhh-ccceeeeccchhhH
Q psy4819 122 ANVKRSDILWSSKEEEFLIKQWIEYTNSHIL-----------H---ASVSQVTSHVLNELNQVFS-KQSFLVADRFTLAD 186 (387)
Q Consensus 122 ~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~-----------g---~~a~~~l~~~L~~Le~~L~-~~~yLvGd~~TlAD 186 (387)
++++...++|+||.+||+.+.|++|++..+. | +.+.+++...|..||+.|. +++|+.|+++++.|
T Consensus 82 ~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vD 161 (231)
T KOG0406|consen 82 TWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVD 161 (231)
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhh
Confidence 9996579999999999999999999985433 1 4566778999999999999 78999999999999
Q ss_pred HHHHHHHHHHHHH---hh---hcchhhhhhHhhhhhhccCCCccccCCcEE
Q psy4819 187 VFMYYSLISVFKE---LT---LQSKEKHQHVSRWFNHVQSLPEVRLGNPVV 231 (387)
Q Consensus 187 i~l~~~l~~~~~~---l~---~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~ 231 (387)
|++++.+..+... +. ......+|+|.+|.+||.++|+|+.++.+.
T Consensus 162 i~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 162 IAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred hhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 9999655544332 22 223468999999999999999999988653
No 19
>KOG0868|consensus
Probab=99.69 E-value=8.3e-18 Score=148.16 Aligned_cols=170 Identities=14% Similarity=0.197 Sum_probs=138.8
Q ss_pred ccee-ecccccce---eeeeeecCCCceeEEEEEEeecCC---CCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 52 LDLR-VLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN---QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly-~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~---~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
..|| |...|||+ |+|.-+ |.+| +...||+-. +...+|..+||.++||.++.++..+.+ |+.||.+
T Consensus 6 piLYSYWrSSCswRVRiALaLK---~iDY--ey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeE 80 (217)
T KOG0868|consen 6 PILYSYWRSSCSWRVRIALALK---GIDY--EYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEE 80 (217)
T ss_pred chhhhhhcccchHHHHHHHHHc---CCCc--ceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHh
Confidence 4577 99999996 888753 8999 557799954 333489999999999997555443332 7899999
Q ss_pred ccccccccccccchhhHHHHHHHhhccccee----------------e---hhhhhHHHHHHHHHhhhhhc--cceeeec
Q psy4819 122 ANVKRSDILWSSKEEEFLIKQWIEYTNSHIL----------------H---ASVSQVTSHVLNELNQVFSK--QSFLVAD 180 (387)
Q Consensus 122 ~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~----------------g---~~a~~~l~~~L~~Le~~L~~--~~yLvGd 180 (387)
+||. ..|+|+|+..||.+++......+.+. | ..+..-+.+.|..||+.|.. +.|.|||
T Consensus 81 t~P~-ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGD 159 (217)
T KOG0868|consen 81 TYPD-PPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGD 159 (217)
T ss_pred cCCC-CCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCc
Confidence 9998 78999999999999999988877654 1 34567788999999999975 4799999
Q ss_pred cchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 181 RFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 181 ~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
.+|+||+++.+.+..+.+. ++ ...||-+.|-.+++...|+|+.+..+
T Consensus 160 evtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 160 EVTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred eeehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 9999999999999877554 44 35899999999999999999987754
No 20
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.67 E-value=5e-17 Score=153.32 Aligned_cols=161 Identities=14% Similarity=0.138 Sum_probs=115.7
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhccccc--cccccccchhhH
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSANVKR--SDILWSSKEEEF 138 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y~~~--~~L~g~~~~erA 138 (387)
++|.++ |++|+ ...||+.. .+++|+.+||.|.||.+.+++..+++ |++||+++|+.. ..+.+.++..++
T Consensus 27 i~L~ek---gi~~e--~~~vd~~~-~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~ 100 (236)
T TIGR00862 27 MILWLK---GVVFN--VTTVDLKR-KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNT 100 (236)
T ss_pred HHHHHc---CCCcE--EEEECCCC-CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHH
Confidence 778874 89995 46688875 47889999999999887665555554 799999999752 245566665555
Q ss_pred HHH-HHHhhc---cccee--ehhhhhHHHHHHHHHhhhhh------------------ccceeeeccchhhHHHHHHHHH
Q psy4819 139 LIK-QWIEYT---NSHIL--HASVSQVTSHVLNELNQVFS------------------KQSFLVADRFTLADVFMYYSLI 194 (387)
Q Consensus 139 ~v~-~Wl~f~---~s~l~--g~~a~~~l~~~L~~Le~~L~------------------~~~yLvGd~~TlADi~l~~~l~ 194 (387)
... -|..|. .+.-. .+...+.+.+.++.||++|. +++|++||++|+|||++++.+.
T Consensus 101 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~ 180 (236)
T TIGR00862 101 AGLDIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLH 180 (236)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHH
Confidence 432 222221 11000 02234558889999999997 4789999999999999999998
Q ss_pred HHHHH----hhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 195 SVFKE----LTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 195 ~~~~~----l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
++... .+.+..+.||+|.+|+++|.+||+|+..+..
T Consensus 181 ~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~ 220 (236)
T TIGR00862 181 IVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPD 220 (236)
T ss_pred HHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCC
Confidence 76531 1333357899999999999999999987643
No 21
>PRK10387 glutaredoxin 2; Provisional
Probab=99.66 E-value=3.1e-17 Score=150.89 Aligned_cols=159 Identities=13% Similarity=0.188 Sum_probs=114.0
Q ss_pred cceeecccc-cce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccc-cccchHHHH---HHHHhhhcc
Q psy4819 52 LDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPL-KTENLYLWK---LFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl-~~e~~~l~~---il~YLa~~y 123 (387)
|+||..+.+ |+. ++|++ .|.+|+. +.++...+..+ ..+||.+.||.+ .+++..+++ |++||+++|
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~---~gi~y~~--~~~~~~~~~~~--~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~ 73 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGL---KNIPVEL--IVLANDDEATP--IRMIGQKQVPILQKDDGSYMPESLDIVHYIDELD 73 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHH---cCCCeEE--EEcCCCchhhH--HHhcCCcccceEEecCCeEecCHHHHHHHHHHhC
Confidence 689987744 553 88888 4899954 33555433322 457777788777 345555554 799999999
Q ss_pred ccccccccccchhhHHHHHHHhhccccee--------e---------------------------------hhhhhHHHH
Q psy4819 124 VKRSDILWSSKEEEFLIKQWIEYTNSHIL--------H---------------------------------ASVSQVTSH 162 (387)
Q Consensus 124 ~~~~~L~g~~~~erA~v~~Wl~f~~s~l~--------g---------------------------------~~a~~~l~~ 162 (387)
++ . +++ ..+++++++|+++..+.++ . +...+.+.+
T Consensus 74 ~~-~-~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (210)
T PRK10387 74 GK-P-LLT--GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINA 149 (210)
T ss_pred CC-c-cCC--CcccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHH
Confidence 85 3 443 2368899999887754332 0 122456778
Q ss_pred HHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccc
Q psy4819 163 VLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVR 225 (387)
Q Consensus 163 ~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k 225 (387)
.|+.+|++|++ +|++||++|+||+++++.+.|+... +. .+.+|+|.+|++||.+||++.
T Consensus 150 ~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~-~~--~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 150 DLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLV-KG--IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceee-cC--CCCCHHHHHHHHHHHHHhCCC
Confidence 89999999986 9999999999999999999886542 11 124699999999999999874
No 22
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.55 E-value=2e-15 Score=139.82 Aligned_cols=157 Identities=11% Similarity=0.154 Sum_probs=108.2
Q ss_pred ceeecccc--cc--eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccc-ccchHHHH---HHHHhhhccc
Q psy4819 53 DLRVLQGS--CE--QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLK-TENLYLWK---LFQAISSANV 124 (387)
Q Consensus 53 ~Ly~~pGa--cs--~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~-~e~~~l~~---il~YLa~~y~ 124 (387)
+||+.+.+ |. .++|++ .|++|+. ++.....+...+.+||.|++|.+. +++..+++ |++||+++|+
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~---~gl~~e~----~~~~~~~~~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~ 73 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGL---KNIPVEK----HVLLNDDEETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDG 73 (209)
T ss_pred CeecCCCCChHHHHHHHHHH---cCCCeEE----EECCCCcchhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCC
Confidence 57776654 33 278887 4899954 333332222337889888888875 55545453 7999999997
Q ss_pred cccccccccchhhHHHHHHHhhccccee--------e---------------------------------hhhhhHHHHH
Q psy4819 125 KRSDILWSSKEEEFLIKQWIEYTNSHIL--------H---------------------------------ASVSQVTSHV 163 (387)
Q Consensus 125 ~~~~L~g~~~~erA~v~~Wl~f~~s~l~--------g---------------------------------~~a~~~l~~~ 163 (387)
. .+++ +.+++++++|+.++...++ . +...+.+.+.
T Consensus 74 ~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (209)
T TIGR02182 74 E--PLLT--GKVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINAD 149 (209)
T ss_pred C--ccCC--CCChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHH
Confidence 5 2333 2256778888876443321 0 1234567888
Q ss_pred HHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhh-hHhhhhhhccCCCccc
Q psy4819 164 LNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQ-HVSRWFNHVQSLPEVR 225 (387)
Q Consensus 164 L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P-~L~rw~~rv~~rP~~k 225 (387)
|+.||++|++++|+.| ++|+|||++++.+.|+... +. ..+| ||.+|++||.+|+++.
T Consensus 150 l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~-~~---~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 150 LEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV-AG---INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee-cC---CCCChHHHHHHHHHHHHhCCC
Confidence 9999999999999955 6999999999998875431 11 1367 9999999999998863
No 23
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=1e-14 Score=122.64 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=79.7
Q ss_pred ccchhhHHHHHHHhhcccceee----------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHH
Q psy4819 132 SSKEEEFLIKQWIEYTNSHILH----------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 195 (387)
Q Consensus 132 ~~~~erA~v~~Wl~f~~s~l~g----------------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~ 195 (387)
.|+..+++|++|++|.++++.+ +...+.+.+.++.||++|++++|++||++|+|||++++.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~ 81 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQ 81 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHH
Confidence 3688999999999999987750 345668899999999999999999999999999999988766
Q ss_pred HHHH-hhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 196 VFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 196 ~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
.... ......+.||+|.+|+++|.+||+|++++
T Consensus 82 ~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 82 FAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 5432 11222468999999999999999999863
No 24
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.51 E-value=9.9e-15 Score=122.81 Aligned_cols=101 Identities=29% Similarity=0.466 Sum_probs=82.8
Q ss_pred hhHHHHHHHhhccccee-----------e---------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL-----------H---------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 195 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~-----------g---------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~ 195 (387)
+|+++++|+.|.++.++ + +...+.+.+.|+.||++|+.++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 36777777777766554 0 335667788999999999999999999999999999999988
Q ss_pred HHHH-hhhcchhhhhhHhhhhhhccCCCccccCCcEEEEEee
Q psy4819 196 VFKE-LTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVVLFSIS 236 (387)
Q Consensus 196 ~~~~-l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~~~~~~ 236 (387)
+... ++....+.+|++.+|+++|.++|+|++++.+.++|+|
T Consensus 81 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~ 122 (123)
T cd03181 81 GFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKLCEK 122 (123)
T ss_pred HHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCcCCC
Confidence 7543 3433456899999999999999999999999999985
No 25
>KOG4420|consensus
Probab=99.49 E-value=4.4e-14 Score=131.24 Aligned_cols=182 Identities=14% Similarity=0.121 Sum_probs=132.4
Q ss_pred CCCccccceeecccccc-e---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHH---HHH
Q psy4819 46 IQTPEFLDLRVLQGSCE-Q---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLW---KLF 116 (387)
Q Consensus 46 ~~~~~~~~Ly~~pGacs-~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~---~il 116 (387)
--++|.|.||..|-+.+ + .+++|+ |..++. ..||+.. +..+.|+.+||.|.||.+.....++- .|+
T Consensus 21 ~~~~e~~vLyhhpysf~sQkVrlvi~EK---~id~~~--y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqII 95 (325)
T KOG4420|consen 21 HWPRESLVLYHHPYSFSSQKVRLVIAEK---GIDCEE--YDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQII 95 (325)
T ss_pred CCchhcceeeecCcccccceeeeehhhc---ccccce--eeccCccccccCchheecCCCCCCceEecCCeecccHHHHH
Confidence 35677899999999866 2 666774 888854 5588865 67778999998888888766544433 378
Q ss_pred HHhhhccccccccccc-cchhhHHHHHHHhh---------cccc-ee---------------------------------
Q psy4819 117 QAISSANVKRSDILWS-SKEEEFLIKQWIEY---------TNSH-IL--------------------------------- 152 (387)
Q Consensus 117 ~YLa~~y~~~~~L~g~-~~~erA~v~~Wl~f---------~~s~-l~--------------------------------- 152 (387)
.|+.+++-+...|.|. +..+..++.+.-.. ..+. +|
T Consensus 96 dYvErtf~ger~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e 175 (325)
T KOG4420|consen 96 DYVERTFTGERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEE 175 (325)
T ss_pred HHHHHhhcccccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999887778883 44444444322111 1111 11
Q ss_pred -------------------------e--hhhhhHHHHHHHHHhhhhhc----cceeeeccchhhHHHHHHHHHHHHHH-h
Q psy4819 153 -------------------------H--ASVSQVTSHVLNELNQVFSK----QSFLVADRFTLADVFMYYSLISVFKE-L 200 (387)
Q Consensus 153 -------------------------g--~~a~~~l~~~L~~Le~~L~~----~~yLvGd~~TlADi~l~~~l~~~~~~-l 200 (387)
+ .+....+...|..+|+.|.. .+||+|+.||+||+.+..++..+... +
T Consensus 176 ~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~ 255 (325)
T KOG4420|consen 176 EPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGL 255 (325)
T ss_pred CchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHccc
Confidence 0 33456677788888998987 57999999999999999999987653 4
Q ss_pred hhcchh--hhhhHhhhhhhccCCCccccCCcEEE
Q psy4819 201 TLQSKE--KHQHVSRWFNHVQSLPEVRLGNPVVL 232 (387)
Q Consensus 201 ~~~~~~--~~P~L~rw~~rv~~rP~~k~~l~~~~ 232 (387)
....+. ..|||..||.|++.|++|+++++.+-
T Consensus 256 e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~~f 289 (325)
T KOG4420|consen 256 EKKYWEDGSRPNLESYFERVRRRFSFRKVLGDIF 289 (325)
T ss_pred HHHhcccCCCccHHHHHHHHHhhhHHHHhhhhHH
Confidence 333444 68999999999999999999998753
No 26
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.45 E-value=8.3e-14 Score=113.57 Aligned_cols=95 Identities=20% Similarity=0.379 Sum_probs=77.0
Q ss_pred HHhhhccccccccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHH
Q psy4819 117 QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 196 (387)
Q Consensus 117 ~YLa~~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~g~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~ 196 (387)
+||++. .+|+|+++.++++|++|+++...++. .....++.+.++.+|++|++++|++|+++|+|||++++.+.+.
T Consensus 2 r~~~~~----~~~~~~~~~~~~~vd~~~d~~~~~l~-~~~~~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~ 76 (96)
T cd03200 2 RFLYRL----LGPAPNAPNAATNIDSWVDTAIFQLA-EGSSKEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT 76 (96)
T ss_pred chHHHH----hcccCCCchHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc
Confidence 577766 37999999999999999998765542 1245667789999999999999999999999999999887653
Q ss_pred HHHhhhcchhhhhhHhhhhhhccCC
Q psy4819 197 FKELTLQSKEKHQHVSRWFNHVQSL 221 (387)
Q Consensus 197 ~~~l~~~~~~~~P~L~rw~~rv~~r 221 (387)
. .. ...||||.+|++||.++
T Consensus 77 -~-~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 77 -G-LA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred -c-cc---cccChHHHHHHHHHHhC
Confidence 1 11 25799999999999763
No 27
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.44 E-value=1.4e-13 Score=113.85 Aligned_cols=91 Identities=19% Similarity=0.355 Sum_probs=73.6
Q ss_pred hhHHHHHHHhhccccee--------e--------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL--------H--------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSL 193 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~--------g--------------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l 193 (387)
+||++++|+.|.++.+. . +.....+.+.++.||++|++++|++||++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 57888999988876554 0 2345678889999999999889999999999999999998
Q ss_pred HHHHHHhhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 194 ISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 194 ~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
.++... +. ..+.||+|.+|+++|.++|+|++++
T Consensus 82 ~~~~~~-~~-~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGV-GL-DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhc-CC-ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 876432 21 2357999999999999999998864
No 28
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.43 E-value=1.1e-13 Score=115.22 Aligned_cols=93 Identities=22% Similarity=0.338 Sum_probs=72.1
Q ss_pred hhHHHHHHHhhccccee----------------e--------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL----------------H--------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYY 191 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~----------------g--------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~ 191 (387)
+|+++++|+.|..+.++ + +.....+.+.++.||++|++++|++||++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 56777777777655443 0 23456788899999999998999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 192 SLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 192 ~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
.+.++.........+.||++.+|+++|.++|++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 8877643211223468999999999999999998754
No 29
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.43 E-value=1.3e-13 Score=113.52 Aligned_cols=93 Identities=11% Similarity=0.164 Sum_probs=75.3
Q ss_pred chhhHHHHHHHhhcccceee-------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHh
Q psy4819 134 KEEEFLIKQWIEYTNSHILH-------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKEL 200 (387)
Q Consensus 134 ~~erA~v~~Wl~f~~s~l~g-------------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l 200 (387)
+.+||++++|++|+++.++. +...+.+.+.+..||++|++++|++||++|+|||++++.+.++. ..
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~-~~ 79 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLP-AL 79 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHH-Hc
Confidence 45799999999998876650 33566788999999999999999999999999999999875433 22
Q ss_pred hhcchhhhhhHhhhhhhccCCCccccC
Q psy4819 201 TLQSKEKHQHVSRWFNHVQSLPEVRLG 227 (387)
Q Consensus 201 ~~~~~~~~P~L~rw~~rv~~rP~~k~~ 227 (387)
+......+|++.+|+++|.+||+|+++
T Consensus 80 ~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 80 GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 222224799999999999999999875
No 30
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.42 E-value=2.3e-13 Score=113.90 Aligned_cols=90 Identities=17% Similarity=0.346 Sum_probs=73.9
Q ss_pred cccchhhHHHHHHHhhcccceee------------h----------------hhhhHHHHHHHHHhhhhhccceeeeccc
Q psy4819 131 WSSKEEEFLIKQWIEYTNSHILH------------A----------------SVSQVTSHVLNELNQVFSKQSFLVADRF 182 (387)
Q Consensus 131 g~~~~erA~v~~Wl~f~~s~l~g------------~----------------~a~~~l~~~L~~Le~~L~~~~yLvGd~~ 182 (387)
|.++.+|+++++|++|.++.++. . .....+.+.|+.||++|++++|++||++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 46788999999999998876650 1 1234678889999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCC
Q psy4819 183 TLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLP 222 (387)
Q Consensus 183 TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP 222 (387)
|+|||++++.+.|+... +. ..+.||+|.+|+++|.+||
T Consensus 82 t~ADi~l~~~~~~~~~~-~~-~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALAR-GP-LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHc-Cc-ccccCchHHHHHHHHhcCC
Confidence 99999999998887543 22 3578999999999999987
No 31
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.42 E-value=1.2e-13 Score=114.41 Aligned_cols=92 Identities=15% Similarity=0.382 Sum_probs=74.7
Q ss_pred hhHHHHHHHhhccccee------------e--------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL------------H--------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 195 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~------------g--------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~ 195 (387)
+||++++|+.|.++.++ + +.....+.+.++.+|++|++++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 46888888888876654 0 234567888999999999988999999999999999999887
Q ss_pred HHHHhhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 196 VFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 196 ~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
.... +....+.||++.+|+++|.++|++++++
T Consensus 81 ~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWI-GIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhc-cccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 6432 2223568999999999999999999865
No 32
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.40 E-value=3.5e-13 Score=112.32 Aligned_cols=91 Identities=20% Similarity=0.354 Sum_probs=74.2
Q ss_pred cchhhHHHHHHHhhccccee--------------e------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhH
Q psy4819 133 SKEEEFLIKQWIEYTNSHIL--------------H------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLAD 186 (387)
Q Consensus 133 ~~~erA~v~~Wl~f~~s~l~--------------g------------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlAD 186 (387)
|+.+|+++++|+.|+.+.++ + +.....+.+.|..||++|++++|++||++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 46789999999999766543 0 234567889999999999988999999999999
Q ss_pred HHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCcc
Q psy4819 187 VFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEV 224 (387)
Q Consensus 187 i~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~ 224 (387)
|++++.+.|+... +.+....||+|.+|+++|.+||++
T Consensus 81 i~l~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVV-KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhc-CCCCccccHHHHHHHHHHHhccCC
Confidence 9999999876442 333346899999999999999985
No 33
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.40 E-value=2.7e-13 Score=114.52 Aligned_cols=97 Identities=14% Similarity=0.207 Sum_probs=79.1
Q ss_pred chhhHHHHHHHhhccccee-------------ehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-
Q psy4819 134 KEEEFLIKQWIEYTNSHIL-------------HASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE- 199 (387)
Q Consensus 134 ~~erA~v~~Wl~f~~s~l~-------------g~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~- 199 (387)
|.+||++++|++|.++.++ .+.....+.+.++.||++|++++|++|+++|+|||++++.+.++...
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~ 80 (126)
T cd03185 1 PYERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYE 80 (126)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 3578999999999877654 03456678899999999999899999999999999999998886432
Q ss_pred --hhhc--chhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 200 --LTLQ--SKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 200 --l~~~--~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
.+.. ..+.||++.+|+++|.++|+|++++..
T Consensus 81 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 115 (126)
T cd03185 81 EVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPD 115 (126)
T ss_pred HHcCccccCcccCchHHHHHHHHHhccHHHHhCCC
Confidence 1222 246799999999999999999998765
No 34
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.39 E-value=4.5e-13 Score=112.70 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=74.9
Q ss_pred chhhHHHHHHHhhcccceee----------------------hhhhhHHHHHHHHHhhhhhc--cceeeeccchhhHHHH
Q psy4819 134 KEEEFLIKQWIEYTNSHILH----------------------ASVSQVTSHVLNELNQVFSK--QSFLVADRFTLADVFM 189 (387)
Q Consensus 134 ~~erA~v~~Wl~f~~s~l~g----------------------~~a~~~l~~~L~~Le~~L~~--~~yLvGd~~TlADi~l 189 (387)
|.+|+++++|+.|+.++++. +...+.+.+.|+.||++|++ ++||+||++|+|||++
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~ 80 (121)
T cd03191 1 PKKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICL 80 (121)
T ss_pred ChhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHH
Confidence 45789999999998876650 01224567889999999984 4799999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 190 YYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 190 ~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
++.+.|+... +.. .+.||+|.+|+++|.++|+|++++.
T Consensus 81 ~~~~~~~~~~-~~~-~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 81 VPQVYNARRF-GVD-LSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHh-CCC-cccCcHHHHHHHHHHhChhHHHhCc
Confidence 9998876543 221 3689999999999999999999865
No 35
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.39 E-value=5.6e-13 Score=111.84 Aligned_cols=92 Identities=16% Similarity=0.334 Sum_probs=75.4
Q ss_pred hhHHHHHHHhhccccee-------------e----hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL-------------H----ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFK 198 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~-------------g----~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~ 198 (387)
+++++++|++|..+.++ + +.....+.+.|+.||++|++++|++|+++|+|||++++.+.|+..
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~ 81 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA 81 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH
Confidence 57889999988877654 0 345678889999999999988999999999999999999988753
Q ss_pred HhhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 199 ELTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 199 ~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
..+.. ...||+|.+|+++|.++|+|++..
T Consensus 82 ~~~~~-~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 82 LLPLD-LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred hcCCC-hhhCchHHHHHHHHHcccchHHHH
Confidence 11211 357999999999999999999754
No 36
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.36 E-value=9.7e-13 Score=114.68 Aligned_cols=96 Identities=19% Similarity=0.258 Sum_probs=77.2
Q ss_pred hhhHHHHHHHhhccccee---------e-----hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-
Q psy4819 135 EEEFLIKQWIEYTNSHIL---------H-----ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE- 199 (387)
Q Consensus 135 ~erA~v~~Wl~f~~s~l~---------g-----~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~- 199 (387)
+.||+|++|++|....+. . +.....+.+.|+.||++|++++|++|+++|+|||++++.+.++...
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHh
Confidence 358899999999876554 0 3456788899999999999899999999999999999888764221
Q ss_pred ---h--hhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 200 ---L--TLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 200 ---l--~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
. +....+.||+|.+|+++|.++|+|++++..
T Consensus 83 ~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 83 VQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred hhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 1 112245899999999999999999998865
No 37
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.35 E-value=1.1e-12 Score=107.75 Aligned_cols=87 Identities=21% Similarity=0.424 Sum_probs=68.5
Q ss_pred hhHHHHHHHhhcccceee----------------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHILH----------------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSL 193 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~g----------------------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l 193 (387)
+|+++++|+.|..+.++. +...+.+.+.|+.||++|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 477888888877665540 2345678899999999999889999999999999999887
Q ss_pred HHHHHHhhhcchhhhhhHhhhhhhccCCCcc
Q psy4819 194 ISVFKELTLQSKEKHQHVSRWFNHVQSLPEV 224 (387)
Q Consensus 194 ~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~ 224 (387)
...... + ...+.||+|.+|+++|.++|+|
T Consensus 82 ~~~~~~-~-~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFEL-P-IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHc-c-cccccCchHHHHHHHHHhCCCC
Confidence 433222 2 1346899999999999999986
No 38
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.30 E-value=1e-12 Score=111.29 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=59.8
Q ss_pred hhhhHHHHHHHHHhhhh-hccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccC--CCccccCCc
Q psy4819 155 SVSQVTSHVLNELNQVF-SKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQS--LPEVRLGNP 229 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L-~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~--rP~~k~~l~ 229 (387)
...+.+.+.++.+|++| ++++|++||++|+|||++++.+.+.... +.+..+.||+|.+|+++|.+ ||+|+++++
T Consensus 45 ~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~~ 121 (126)
T cd03183 45 KAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAA-GYDVFEGRPKLAAWRKRVKEAGNPLFDEAHK 121 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhc-CCcccccCchHHHHHHHHHHhcchhHHHHHH
Confidence 34567888999999985 5578999999999999999988765432 22234689999999999999 999998764
No 39
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=8.9e-13 Score=107.73 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=63.4
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
+.....+...++.||++|++++|++||++|+|||++++.+.|+... + ..+.+|+|++|+++|.+||+|++++.
T Consensus 29 ~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~-~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 29 MAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF-G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred hhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 3456778999999999999999999999999999999999887542 2 24689999999999999999998765
No 40
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.25 E-value=5.7e-12 Score=106.66 Aligned_cols=97 Identities=12% Similarity=0.258 Sum_probs=72.7
Q ss_pred cchhhHHHHHHHhhcccce---e----ehhhhhHHHHHHHHHhhhhh---ccceeeeccchhhHHHHHHHHHHHHH---H
Q psy4819 133 SKEEEFLIKQWIEYTNSHI---L----HASVSQVTSHVLNELNQVFS---KQSFLVADRFTLADVFMYYSLISVFK---E 199 (387)
Q Consensus 133 ~~~erA~v~~Wl~f~~s~l---~----g~~a~~~l~~~L~~Le~~L~---~~~yLvGd~~TlADi~l~~~l~~~~~---~ 199 (387)
|+.+||+|+||+.|...-. . +....+.+.+.++.||++|+ +++|++| ++|+|||++++.+.++.. .
T Consensus 1 d~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~ 79 (120)
T cd03203 1 DPAKREFADELLAYTDAFTKALYSSLIKGDPSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSE 79 (120)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999832111 0 12234567888999999997 4789999 999999999998875431 1
Q ss_pred -hhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 200 -LTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 200 -l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
.+....++||+|.+|+++|.+||+|+++...
T Consensus 80 ~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 80 LFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred hcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 2222235899999999999999999987653
No 41
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=6.3e-12 Score=105.43 Aligned_cols=91 Identities=10% Similarity=0.100 Sum_probs=73.6
Q ss_pred chhhHHHHHHHhhcccceee--------------------hhhhhHHHHHHHHHhhhhh-ccceeeeccchhhHHHHHHH
Q psy4819 134 KEEEFLIKQWIEYTNSHILH--------------------ASVSQVTSHVLNELNQVFS-KQSFLVADRFTLADVFMYYS 192 (387)
Q Consensus 134 ~~erA~v~~Wl~f~~s~l~g--------------------~~a~~~l~~~L~~Le~~L~-~~~yLvGd~~TlADi~l~~~ 192 (387)
|.+|+++++|+.|+.++++. +...+.+.+.++.+|.+|+ +++||+| +||+||+++++.
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~ 79 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALM 79 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHH
Confidence 45789999999999877651 2346677889999999995 5489999 599999999999
Q ss_pred HHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 193 LISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 193 l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
+.|+... +.+. . |++.+|.+||.+||+|+++++
T Consensus 80 ~~~~~~~-g~~l--~-p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRLVLN-GDPV--P-ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHc-CCCC--C-HHHHHHHHHHHCCHHHHHHHh
Confidence 9987654 2222 2 999999999999999998764
No 42
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.24 E-value=4.4e-12 Score=103.38 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=58.1
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCcc
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEV 224 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~ 224 (387)
+....++.+.++.+|++|++++|++|+++|+|||++++.+.+.... ...++.||+|.+|+++|.++|+|
T Consensus 32 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 32 ETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG--GVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc--CCChhhCcHHHHHHHHHHhCcCC
Confidence 3456788999999999999999999999999999999888764332 22346899999999999999985
No 43
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.22 E-value=5.8e-12 Score=106.39 Aligned_cols=79 Identities=11% Similarity=0.177 Sum_probs=66.2
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcEEEEEe
Q psy4819 156 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVVLFSI 235 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~~~~~ 235 (387)
....+.+.+..||++|++++|++|+++|+||++++..+.|+... .....+.||+|.+|++||.++|++++++...+.++
T Consensus 36 ~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~-~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 36 YLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF-EPDCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh-CccccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 45667889999999999889999999999999999998886542 22335689999999999999999999987765443
No 44
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.20 E-value=1.7e-11 Score=98.32 Aligned_cols=67 Identities=19% Similarity=0.351 Sum_probs=57.5
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcch-hhhhhHhhhhhhccCCC
Q psy4819 155 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSK-EKHQHVSRWFNHVQSLP 222 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~-~~~P~L~rw~~rv~~rP 222 (387)
.....+.+.|+.+|++|++++|++||++|+||+++++.+.|+... +.... +.||+|.+|++||.+||
T Consensus 28 ~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~-~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 28 EARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL-GPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH-TTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh-CCCcccccCHHHHHHHHHHHcCC
Confidence 356778899999999999999999999999999999999987664 33333 79999999999999997
No 45
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.19 E-value=2.2e-11 Score=103.26 Aligned_cols=95 Identities=14% Similarity=0.169 Sum_probs=75.4
Q ss_pred hhHHHHHHHhhccccee-----------ehhhhhHHHHHHHHHhhhhhc--cceeeeccchhhHHHHHHHHHHHHHH-hh
Q psy4819 136 EEFLIKQWIEYTNSHIL-----------HASVSQVTSHVLNELNQVFSK--QSFLVADRFTLADVFMYYSLISVFKE-LT 201 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~-----------g~~a~~~l~~~L~~Le~~L~~--~~yLvGd~~TlADi~l~~~l~~~~~~-l~ 201 (387)
+||+.+.|+++.+..+. .+...+.+.+.++.+|++|++ ++|++|+++|+|||++++.+.++... ..
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~ 81 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLGAPSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLL 81 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHhccccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhh
Confidence 57888888888864322 135677888999999999986 78999999999999999988775432 11
Q ss_pred ---hcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 202 ---LQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 202 ---~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
....+.||+|.+|+++|.++|+++.++..
T Consensus 82 ~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~ 113 (124)
T cd03184 82 LGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTD 113 (124)
T ss_pred ccccCCcccChHHHHHHHHhccChHHHHHhCC
Confidence 12357899999999999999999998764
No 46
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.18 E-value=2.4e-11 Score=101.78 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=58.5
Q ss_pred hhhhHHHHHHHHHhhhhhcc----------ceeeeccchhhHHHHHHHHHHHHHH-hhhcc--hhhhhhHhhhhhhccCC
Q psy4819 155 SVSQVTSHVLNELNQVFSKQ----------SFLVADRFTLADVFMYYSLISVFKE-LTLQS--KEKHQHVSRWFNHVQSL 221 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~----------~yLvGd~~TlADi~l~~~l~~~~~~-l~~~~--~~~~P~L~rw~~rv~~r 221 (387)
.....+.+.|+.||++|+++ +||+|+++|+|||++++.+.|+... ++... ...||+|.+|++||.+|
T Consensus 29 ~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv~aR 108 (111)
T cd03204 29 KILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERVLQR 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHHHHcC
Confidence 45678899999999999865 4999999999999999999887643 33221 35899999999999999
Q ss_pred Ccc
Q psy4819 222 PEV 224 (387)
Q Consensus 222 P~~ 224 (387)
|+|
T Consensus 109 psf 111 (111)
T cd03204 109 ESF 111 (111)
T ss_pred CCC
Confidence 986
No 47
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=2.7e-11 Score=98.66 Aligned_cols=82 Identities=16% Similarity=0.258 Sum_probs=66.4
Q ss_pred hhHHHHHHHhhccccee---------------e-------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHH
Q psy4819 136 EEFLIKQWIEYTNSHIL---------------H-------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSL 193 (387)
Q Consensus 136 erA~v~~Wl~f~~s~l~---------------g-------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l 193 (387)
+||++++|+.|.++.++ . +.....+.+.++.||.+|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 68999999998766543 0 3466778899999999999889999999999999999999
Q ss_pred HHHHHHhhhcchhhhhhHhhhhhhcc
Q psy4819 194 ISVFKELTLQSKEKHQHVSRWFNHVQ 219 (387)
Q Consensus 194 ~~~~~~l~~~~~~~~P~L~rw~~rv~ 219 (387)
.|+... +.+ ...||++.+|+++|.
T Consensus 82 ~~~~~~-~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEG-GFD-LADYPAIRAWLARIE 105 (105)
T ss_pred Hhcccc-CCC-hHhCccHHHHHHhhC
Confidence 876432 222 467999999999874
No 48
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.16 E-value=2.9e-11 Score=104.90 Aligned_cols=74 Identities=14% Similarity=0.212 Sum_probs=62.2
Q ss_pred hHHHHHHHHHhhhhh--ccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcEEE
Q psy4819 158 QVTSHVLNELNQVFS--KQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVVL 232 (387)
Q Consensus 158 ~~l~~~L~~Le~~L~--~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~~ 232 (387)
..+.+.|+.||++|+ +++|++|+++|+||+++++.+.|+... .....+.||+|.+|++||.++|++++++....
T Consensus 42 ~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~-~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 42 KAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL-DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh-chhhhccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 456789999999998 678999999999999999999886542 23335689999999999999999999887643
No 49
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.15 E-value=2.6e-11 Score=103.30 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=64.9
Q ss_pred hhhHHHHHHHHHhhhhhc---cceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcEEE
Q psy4819 156 VSQVTSHVLNELNQVFSK---QSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPVVL 232 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L~~---~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~~~ 232 (387)
....+.+.|..||++|++ ++|++|+++|+||+++++.+.|+... .....+.||+|.+|++||.++|+|++++....
T Consensus 36 ~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~-~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 36 YIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL-APGCLDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh-ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 345678899999999974 58999999999999999998886532 22235689999999999999999999987765
Q ss_pred EEe
Q psy4819 233 FSI 235 (387)
Q Consensus 233 ~~~ 235 (387)
..+
T Consensus 115 ~~~ 117 (126)
T cd03210 115 FKN 117 (126)
T ss_pred CCC
Confidence 544
No 50
>KOG1695|consensus
Probab=99.12 E-value=1.1e-10 Score=107.72 Aligned_cols=168 Identities=14% Similarity=0.213 Sum_probs=115.8
Q ss_pred cceeeccc--ccce--eeeeeecCCCceeEEEEEEeecCCC-CCcceeeeccCCCCccccccch---HHHHHHHHhhhcc
Q psy4819 52 LDLRVLQG--SCEQ--ILFEKQSGGGGNFQISCRILDLDNQ-DPVQYSTITNSNDIKPLKTENL---YLWKLFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~pG--acs~--i~lee~~~~G~~~~~~~~~vd~~~~-~~~~yl~inp~~~v~pl~~e~~---~l~~il~YLa~~y 123 (387)
+||+|.++ -|.. .++.- +|.+|+. +.+..... ...... .|-|.+|.+..++. ....|++|||++|
T Consensus 4 ykL~Yf~~RG~ae~iR~lf~~---a~v~fEd--~r~~~~~~w~~~K~~--~pfgqlP~l~vDg~~i~QS~AI~RyLArk~ 76 (206)
T KOG1695|consen 4 YKLTYFNIRGLAEPIRLLFAY---AGVSFED--KRITMEDAWEELKDK--MPFGQLPVLEVDGKKLVQSRAILRYLARKF 76 (206)
T ss_pred eEEEecCcchhHHHHHHHHHh---cCCCcce--eeeccccchhhhccc--CCCCCCCEEeECCEeeccHHHHHHHHHHHh
Confidence 68888874 4553 44443 5899965 33555431 001101 35555555533321 2223899999986
Q ss_pred ccccccccccchhhHHHHHHHhhcccce----e--------eh-------hhhhHHHHHHHHHhhhhh--ccceeeeccc
Q psy4819 124 VKRSDILWSSKEEEFLIKQWIEYTNSHI----L--------HA-------SVSQVTSHVLNELNQVFS--KQSFLVADRF 182 (387)
Q Consensus 124 ~~~~~L~g~~~~erA~v~~Wl~f~~s~l----~--------g~-------~a~~~l~~~L~~Le~~L~--~~~yLvGd~~ 182 (387)
+|.|+|+.|+|++|...+-...-. . |. .........++.+++.|. ++.|||||++
T Consensus 77 ----gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~l 152 (206)
T KOG1695|consen 77 ----GLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKL 152 (206)
T ss_pred ----CcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcc
Confidence 589999999999998776543211 1 11 234466788999999998 4479999999
Q ss_pred hhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 183 TLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 183 TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
|.||++++..+..+...+++...+.||+|.++..+|.++|.+++++..
T Consensus 153 T~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 153 TWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred cHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHHHhc
Confidence 999999999988765434555567889999999999999999998765
No 51
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.09 E-value=7.1e-11 Score=102.05 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=61.9
Q ss_pred hhhhhHHHHHHHHHhhhhhc----------------cceeeeccchhhHHHHHHHHHHHHHH----hhhcchhhhhhHhh
Q psy4819 154 ASVSQVTSHVLNELNQVFSK----------------QSFLVADRFTLADVFMYYSLISVFKE----LTLQSKEKHQHVSR 213 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~----------------~~yLvGd~~TlADi~l~~~l~~~~~~----l~~~~~~~~P~L~r 213 (387)
+.....+...|+.||++|++ ++||+|+++|+|||++++.+.++... .+......||||.+
T Consensus 28 e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~a 107 (134)
T cd03198 28 ENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWR 107 (134)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHHHHH
Confidence 44567888999999999986 67999999999999999998765321 12222468999999
Q ss_pred hhhhccCCCccccCCc
Q psy4819 214 WFNHVQSLPEVRLGNP 229 (387)
Q Consensus 214 w~~rv~~rP~~k~~l~ 229 (387)
|++||.+||+|++++.
T Consensus 108 w~~ri~aRPsfk~t~~ 123 (134)
T cd03198 108 YLKNAYQREEFTNTCP 123 (134)
T ss_pred HHHHHHCCHHHHHHcC
Confidence 9999999999998764
No 52
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.08 E-value=1e-10 Score=95.17 Aligned_cols=85 Identities=20% Similarity=0.362 Sum_probs=62.3
Q ss_pred cchhhHHHHHHHhhcc---ccee--------ehhhhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHHHHHHHHHHH
Q psy4819 133 SKEEEFLIKQWIEYTN---SHIL--------HASVSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMYYSLISVFKE 199 (387)
Q Consensus 133 ~~~erA~v~~Wl~f~~---s~l~--------g~~a~~~l~~~L~~Le~~L~~~~--yLvGd~~TlADi~l~~~l~~~~~~ 199 (387)
++..++++++|++|.. .... ++...+++.+.++.+|++|+.++ ||+|+++|+||+++++.+.....
T Consensus 2 ~~~~~a~i~~W~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~- 80 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSVAFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW- 80 (99)
T ss_dssp --TTHHHHHHHHH-GHCCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHhccchhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh-
Confidence 4667899999999651 0000 25677889999999999999988 99999999999999998854331
Q ss_pred hhhcchhhhhhHhhhhhhccC
Q psy4819 200 LTLQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 200 l~~~~~~~~P~L~rw~~rv~~ 220 (387)
. ...+.||||.+|++||.+
T Consensus 81 -~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 81 -A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp -C-HHTTTCHHHHHHHHHHHT
T ss_pred -c-ccccccHHHHHHHHhhcC
Confidence 1 111589999999999864
No 53
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.05 E-value=2.3e-10 Score=97.18 Aligned_cols=75 Identities=13% Similarity=0.138 Sum_probs=59.7
Q ss_pred hhhHHHHHHHHHhhhhhc-cceeeeccchhhHHHHHHHHHHHHHHh----hhcchhhhhhHhhhhhhccCCCccccCCcE
Q psy4819 156 VSQVTSHVLNELNQVFSK-QSFLVADRFTLADVFMYYSLISVFKEL----TLQSKEKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L~~-~~yLvGd~~TlADi~l~~~l~~~~~~l----~~~~~~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
..+.+.+.|..||++|++ ++|++||++|+|||++++.+.++.... +....+.||+|.+|+++|.+||+|++++..
T Consensus 31 ~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~~~ 110 (121)
T cd03201 31 TEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTKAE 110 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcCCC
Confidence 345678889999999985 799999999999999999766543211 111236899999999999999999987654
No 54
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.02 E-value=3.4e-10 Score=85.77 Aligned_cols=63 Identities=19% Similarity=0.267 Sum_probs=52.4
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhh
Q psy4819 155 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNH 217 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~r 217 (387)
...+.+.+.++.||++|++++|++|+++|+||+++++.+.++... .+....+.||+|.+|++|
T Consensus 6 ~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 6 RARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 456788999999999999999999999999999999999887654 333456899999999986
No 55
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.87 E-value=2.4e-09 Score=85.43 Aligned_cols=64 Identities=19% Similarity=0.364 Sum_probs=52.9
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhc
Q psy4819 155 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHV 218 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv 218 (387)
...+.+.+.++.||++|++++|++|+++|+||+++++.+.|+... ......+.+|++.+|+++|
T Consensus 36 ~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 36 EAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 345678899999999999999999999999999999999987653 2211246899999999986
No 56
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.86 E-value=3.8e-09 Score=86.19 Aligned_cols=62 Identities=18% Similarity=0.294 Sum_probs=52.0
Q ss_pred hhhHHHHHHHHHhhhhhc--cceeeeccchhhHHHHHHHHHHHHHHhhhcc-hhhhhhHhhhhhhc
Q psy4819 156 VSQVTSHVLNELNQVFSK--QSFLVADRFTLADVFMYYSLISVFKELTLQS-KEKHQHVSRWFNHV 218 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L~~--~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~-~~~~P~L~rw~~rv 218 (387)
..+.+.+.++.||++|.+ ++|++|+++|+||+++++.+.++... ++.. ...||++.+|+++|
T Consensus 40 ~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 40 LKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL-DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh-CchhhHHhChhHHHHHHhC
Confidence 456788999999999987 89999999999999999999886543 3333 57899999999985
No 57
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.82 E-value=4.4e-09 Score=83.61 Aligned_cols=64 Identities=14% Similarity=0.271 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhh----cchhhhhhHhhhhhhcc
Q psy4819 156 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTL----QSKEKHQHVSRWFNHVQ 219 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~----~~~~~~P~L~rw~~rv~ 219 (387)
..+++.+.++.+|++|++++|++|+++|+|||++++.+.++... +.. ...+.||+|.+|++||.
T Consensus 20 ~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 20 IYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 46778899999999999999999999999999999998876542 111 13467999999999974
No 58
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.81 E-value=3e-09 Score=89.27 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=52.7
Q ss_pred hhhHHHHHHHHHhhhh---hccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 156 VSQVTSHVLNELNQVF---SKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 156 a~~~l~~~L~~Le~~L---~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
..+.+.+.++.+|..| ++++||+|| +|+||+++++.+.|+.. .+.+ ..|+|.+|++||.++|+|++.+.
T Consensus 42 ~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~-~~~~---~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 42 VQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT-YGLP---LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH-cCCC---CCHHHHHHHHHHHCCHHHHHHHh
Confidence 3445556666666655 467899999 99999999999888744 2322 23999999999999999998763
No 59
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.81 E-value=4.4e-09 Score=89.52 Aligned_cols=67 Identities=16% Similarity=0.168 Sum_probs=56.2
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccC
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~ 220 (387)
+...+.+...|+.+|++|++++|++||++|+||++++..+.|.....+....+.||+|.+|++||.+
T Consensus 57 ~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 57 EAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhc
Confidence 4567788999999999999999999999999999999998887542222334689999999999976
No 60
>PLN02395 glutathione S-transferase
Probab=98.71 E-value=1.9e-08 Score=92.87 Aligned_cols=102 Identities=16% Similarity=0.156 Sum_probs=78.7
Q ss_pred eeeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh-------------
Q psy4819 277 YSTITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA------------- 338 (387)
Q Consensus 277 ~~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~------------- 338 (387)
+-++.||+|++| -+|+.|.|+.+| |++..-.....++++.+..+++.+.+|+.+.+..+.+.
T Consensus 43 ~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (215)
T PLN02395 43 EYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASK 122 (215)
T ss_pred HHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhh
Confidence 346689999999 667899999988 99987432223689988888999999988754332110
Q ss_pred -----------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 339 -----------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 339 -----------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
...+.+.+.++.||++|.++.|++|+++|+|||+++..+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~ 173 (215)
T PLN02395 123 MGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTE 173 (215)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHH
Confidence 0233466788999999999999999999999999987654
No 61
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.66 E-value=3.6e-08 Score=79.99 Aligned_cols=62 Identities=18% Similarity=0.271 Sum_probs=51.9
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhhcchhhhhhHhhhhhhc
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTLQSKEKHQHVSRWFNHV 218 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~~~~~~~P~L~rw~~rv 218 (387)
+.....+.+.|..+|++|++++| |++|+|||++++.+.|+... .+....+.||+|.+|+++|
T Consensus 36 ~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 36 ERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 34567889999999999998899 89999999999999987543 3333457899999999986
No 62
>PLN02473 glutathione S-transferase
Probab=98.61 E-value=5.3e-08 Score=89.88 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=77.6
Q ss_pred eeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh---------------
Q psy4819 279 TITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA--------------- 338 (387)
Q Consensus 279 k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~--------------- 338 (387)
.++||++++| -+|+.|.|+.+| |+++.-.....++++.+..+++.+.+|+.+......+.
T Consensus 46 ~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (214)
T PLN02473 46 LLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLG 125 (214)
T ss_pred HhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhccccc
Confidence 4579999999 677999999988 99987432223688888888999999987654433110
Q ss_pred ---------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 339 ---------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 339 ---------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
...+.+.+.++.||+.|.++.|++|+++|+|||++++.+..
T Consensus 126 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~ 175 (214)
T PLN02473 126 EPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRY 175 (214)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHH
Confidence 02234667889999999988999999999999998877654
No 63
>PRK10542 glutathionine S-transferase; Provisional
Probab=98.59 E-value=9.9e-08 Score=87.01 Aligned_cols=102 Identities=14% Similarity=0.217 Sum_probs=77.8
Q ss_pred eeeeccCCCCcc----ccccchHHHHHH--HHhhhccccccccc-cccchhhHHHHHHHhhcccceeeh-----------
Q psy4819 277 YSTITNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDIL-WSSKEEEFLIKQWIEYTNSHILHA----------- 338 (387)
Q Consensus 277 ~~k~k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~ll-g~~~~~sa~i~qW~~y~~~~~~~~----------- 338 (387)
+=.+.||++++| .+|+.|.|+.+| |+++..+. .+++ +.+..+++.+.+|+.+....+.+.
T Consensus 42 ~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~--~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (201)
T PRK10542 42 DYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD--RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPE 119 (201)
T ss_pred HHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc--cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChH
Confidence 346689999999 578999999988 99876432 3445 556677888899988764443221
Q ss_pred ----hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 339 ----SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 ----~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
...+.+.+.|+.||+.|.++.|++|+++|+|||+++..+...
T Consensus 120 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~ 165 (201)
T PRK10542 120 EYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWA 165 (201)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHh
Confidence 123457888999999999999999999999999998776543
No 64
>KOG1422|consensus
Probab=98.53 E-value=1.2e-07 Score=86.32 Aligned_cols=151 Identities=15% Similarity=0.171 Sum_probs=99.6
Q ss_pred CceeEEEEEEeecCCCCCcceeeeccCCCCccc------cccchHHHHHHHHhhhccccccccccccchhhHHH-----H
Q psy4819 73 GGNFQISCRILDLDNQDPVQYSTITNSNDIKPL------KTENLYLWKLFQAISSANVKRSDILWSSKEEEFLI-----K 141 (387)
Q Consensus 73 G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl------~~e~~~l~~il~YLa~~y~~~~~L~g~~~~erA~v-----~ 141 (387)
|.+| .+..||+.. +|..|+.|.|.+.+|-+ .++... |-+.|.++|+.. .+.--++.|.+-+ .
T Consensus 35 ~~~f--~vttVd~~~-kp~~f~~~sp~~~~P~l~~d~~~~tDs~~---Ie~~Lee~l~~p-~~~~~~~~E~asag~diF~ 107 (221)
T KOG1422|consen 35 GVPF--KVTTVDLSR-KPEWFLDISPGGKPPVLKFDEKWVTDSDK---IEEFLEEKLPPP-KLPTLAPPESASAGSDIFA 107 (221)
T ss_pred CCCc--eEEEeecCC-CcHHHHhhCCCCCCCeEEeCCceeccHHH---HHHHHHHhcCCC-CCcccCCHHHHhhHHHHHH
Confidence 7899 557799854 45677787755555444 233333 677888999863 2221113444433 2
Q ss_pred HHHhhccccee--ehhhhhHHHHHHHHHhhhhhc---cceeeeccchhhHHHHHHHHHHHHH---H-hhhcchhhhhhHh
Q psy4819 142 QWIEYTNSHIL--HASVSQVTSHVLNELNQVFSK---QSFLVADRFTLADVFMYYSLISVFK---E-LTLQSKEKHQHVS 212 (387)
Q Consensus 142 ~Wl~f~~s~l~--g~~a~~~l~~~L~~Le~~L~~---~~yLvGd~~TlADi~l~~~l~~~~~---~-l~~~~~~~~P~L~ 212 (387)
.+..|+-.... ++.....+-+.|..||+||.. ++||.||++|+||+.+.+-|+.+.- . .+....+.+++|.
T Consensus 108 kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~ 187 (221)
T KOG1422|consen 108 KFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVW 187 (221)
T ss_pred HHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHH
Confidence 33344311111 122345677788999999985 6899999999999999998876532 2 3455667899999
Q ss_pred hhhhhccCCCccccCCcE
Q psy4819 213 RWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 213 rw~~rv~~rP~~k~~l~~ 230 (387)
||+..+-++.+|......
T Consensus 188 rYl~~~ya~d~F~~tcp~ 205 (221)
T KOG1422|consen 188 RYLKNAYARDEFTNTCPA 205 (221)
T ss_pred HHHHHHHhHHHhhcCCch
Confidence 999999999988776543
No 65
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=98.53 E-value=1.1e-07 Score=87.81 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=77.4
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh-------------h
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA-------------S 339 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~-------------~ 339 (387)
=++.||++++| -+|+.|.|+.+| |+++.-+. .++++.+..+++.+.+|..+.+.....+ .
T Consensus 50 ~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~--~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (211)
T PRK09481 50 LIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPH--PPLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADA 127 (211)
T ss_pred HHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 35679999999 678999999998 99887432 4688888888888888876543222111 1
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
..+.+...++.||++|.++.|++|+++|+|||+++..+..
T Consensus 128 ~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~ 167 (211)
T PRK09481 128 ARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWR 167 (211)
T ss_pred HHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHH
Confidence 2344677789999999999999999999999999877754
No 66
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=98.52 E-value=2e-07 Score=85.56 Aligned_cols=101 Identities=15% Similarity=0.080 Sum_probs=78.4
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceee--------h------
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILH--------A------ 338 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~--------~------ 338 (387)
-++.||++++| -+|+.|.|+-+| |+++.... ..+++.+..+++.+.+|+.+.+....+ .
T Consensus 43 ~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (210)
T TIGR01262 43 FLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD--PPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLG 120 (210)
T ss_pred hhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcC
Confidence 35679999999 678999999988 99987432 358888888899999998876533211 0
Q ss_pred --------hhhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHHHhHhhh
Q psy4819 339 --------SVSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 --------~~~n~~~~~lqrLd~~L~k~t--FlVg~~lTlADI~v~~~l~~~ 380 (387)
...+.+...|+.||++|.++. |++|+++|+|||.++..+...
T Consensus 121 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~ 172 (210)
T TIGR01262 121 VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNA 172 (210)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHH
Confidence 022336778899999998765 999999999999998887543
No 67
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=98.52 E-value=1.7e-07 Score=86.76 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=74.6
Q ss_pred eeeccCCCCcc--c------cc--cchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceee-------h
Q psy4819 278 STITNSNDIKP--L------KT--ENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILH-------A 338 (387)
Q Consensus 278 ~k~k~Pl~~lP--~------~~--f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~-------~ 338 (387)
=++.||++++| . +| +.|.|+.+| |+++.. ..+++.+..+++.+.+|+.|.+..+.+ +
T Consensus 43 ~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~----~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~ 118 (215)
T PRK13972 43 FLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKT----GLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHF 118 (215)
T ss_pred HHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhc----CCCCCCCHHHHHHHHHHHHHHhhccCcceeeeeee
Confidence 36789999999 2 34 789999988 999862 246666777899999999886543321 1
Q ss_pred -------------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 339 -------------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 339 -------------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
.....+.+.+..||.+|.++.|++|+++|+|||++++.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~ 172 (215)
T PRK13972 119 NHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNA 172 (215)
T ss_pred eccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHH
Confidence 01234667889999999989999999999999998776543
No 68
>PLN02907 glutamate-tRNA ligase
Probab=98.51 E-value=1.7e-07 Score=101.45 Aligned_cols=94 Identities=16% Similarity=0.253 Sum_probs=77.9
Q ss_pred ccCCCCcc----ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhh
Q psy4819 281 TNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQV 354 (387)
Q Consensus 281 k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~~~~n~~~~~lqrLd~~ 354 (387)
.+|++++| .+|+.|.|+.+| |++...+. ..|+|.+..+++.+.+|+.|..... ....+...++.||.+
T Consensus 32 ~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~--~~L~p~d~~erAqV~qWL~~~~~~~----~~~~l~~~L~~LE~~ 105 (722)
T PLN02907 32 SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL--PGFYGQDAFESSQVDEWLDYAPTFS----SGSEFENACEYVDGY 105 (722)
T ss_pred cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC--cCCCCCCHHHHHHHHHHHHHHhhcc----cHHHHHHHHHHHHHH
Confidence 47999999 588999999988 99887432 4688888888999999999986432 123467889999999
Q ss_pred hhccceeeeccchhhHHHHHHhHhhh
Q psy4819 355 FSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 355 L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
|..++|+||+++|+|||++|+.+...
T Consensus 106 L~~rtYLvGd~lTLADIaL~~~L~~~ 131 (722)
T PLN02907 106 LASRTFLVGYSLTIADIAIWSGLAGS 131 (722)
T ss_pred hccCCeecCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999887543
No 69
>PRK11752 putative S-transferase; Provisional
Probab=98.44 E-value=3.2e-07 Score=88.15 Aligned_cols=98 Identities=11% Similarity=0.148 Sum_probs=75.6
Q ss_pred eeeccCCCCcc----cc---ccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceee----h------
Q psy4819 278 STITNSNDIKP----LK---TENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILH----A------ 338 (387)
Q Consensus 278 ~k~k~Pl~~lP----~~---~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~----~------ 338 (387)
=.+.||++++| .+ ++.|.|+.+| |+++.. .++++++..+++.+.+|+.|....... +
T Consensus 92 ~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~----~~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~ 167 (264)
T PRK11752 92 FVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKF----GAFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAY 167 (264)
T ss_pred HHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhc----CCcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 35689999999 32 4899999988 999862 258898888899999998886543210 0
Q ss_pred ----------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 339 ----------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 339 ----------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
.....+.+.|+.||++|.++.|++|+++|+|||++++.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~ 218 (264)
T PRK11752 168 APEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGN 218 (264)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHH
Confidence 01223567789999999999999999999999999876543
No 70
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=4.9e-07 Score=83.38 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=81.1
Q ss_pred ceeeeeccCCCCcc----ccccchHHHHHH--HHhhhccccccccccccch---hhHHHHHHHhhcccceeehh------
Q psy4819 275 QQYSTITNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDILWSSKE---EEFLIKQWIEYTNSHILHAS------ 339 (387)
Q Consensus 275 ~~~~k~k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~---~sa~i~qW~~y~~~~~~~~~------ 339 (387)
+++=.+.||++++| .+|..|.|+-+| |+++..+.. ++++.+.. +++++.+|..|....+.+..
T Consensus 39 ~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~--~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~ 116 (211)
T COG0625 39 PPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP--PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRA 116 (211)
T ss_pred CHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC--CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhh
Confidence 34457889999999 444489999988 999984332 28998885 79999999988765554421
Q ss_pred ---------------hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 340 ---------------VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ---------------~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
....+...+..+|..|.++.|++|+++|+|||++++.+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~ 171 (211)
T COG0625 117 LLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWR 171 (211)
T ss_pred hccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHH
Confidence 2334777889999999999999999999999999877764
No 71
>PRK15113 glutathione S-transferase; Provisional
Probab=98.36 E-value=7.7e-07 Score=82.45 Aligned_cols=102 Identities=9% Similarity=-0.014 Sum_probs=77.1
Q ss_pred eeeeccCCCCcc---ccccchHHHHHH--HHhhhcccc-ccccccccchhhHHHHHHHhhcccceee----------h--
Q psy4819 277 YSTITNSNDIKP---LKTENLYLWKLF--QAISSANVK-RSDILWSSKEEEFLIKQWIEYTNSHILH----------A-- 338 (387)
Q Consensus 277 ~~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~-~~~llg~~~~~sa~i~qW~~y~~~~~~~----------~-- 338 (387)
+=++.||++++| -+|+.|.|+.+| |+++.-+.. ..++++.+..+++.+.+|+.|.+..... +
T Consensus 49 ~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (214)
T PRK15113 49 TYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAG 128 (214)
T ss_pred HHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccC
Confidence 345689999999 678999999988 999874321 1238999988999999998877533211 0
Q ss_pred --------hhhhHHHHHHHHHhhhhhcc-ceeeeccchhhHHHHHHhHhh
Q psy4819 339 --------SVSQVTSHVLNELNQVFSKQ-SFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 339 --------~~~n~~~~~lqrLd~~L~k~-tFlVg~~lTlADI~v~~~l~~ 379 (387)
.....+.+.++.||.+|.+. .|++|+ +|+|||+++..+..
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~ 177 (214)
T PRK15113 129 AKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNR 177 (214)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHH
Confidence 12344678889999999753 699996 99999999887754
No 72
>KOG0867|consensus
Probab=98.35 E-value=8.8e-07 Score=83.26 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=85.0
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhccccccc-cccccchhhHHHHHHHhhcccceeeh-------------
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSD-ILWSSKEEEFLIKQWIEYTNSHILHA------------- 338 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~-llg~~~~~sa~i~qW~~y~~~~~~~~------------- 338 (387)
=.++||++++| .+|+.+.|+.+| |+++.-. .... +++++...++.|.||+.+.++.+.+.
T Consensus 45 fl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~-~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~ 123 (226)
T KOG0867|consen 45 FLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYG-PLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVG 123 (226)
T ss_pred HHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC-CCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceec
Confidence 35689999999 668999999988 8888543 3344 99999988999999998876655331
Q ss_pred ---------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 339 ---------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 339 ---------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
.....+...+..+|..|.++.|++|+++|+|||.+.+.+....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~ 175 (226)
T KOG0867|consen 124 LPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQ 175 (226)
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHh
Confidence 1455688999999999999999999999999999998888764
No 73
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.34 E-value=7.4e-07 Score=81.47 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=74.5
Q ss_pred eccCCCCcc----ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh---------------
Q psy4819 280 ITNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA--------------- 338 (387)
Q Consensus 280 ~k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~--------------- 338 (387)
+.||++++| .+|+.|.|+-+| |++...+ ..++++.+..+++.+.+|+.|.+......
T Consensus 42 ~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~--~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (202)
T PRK10357 42 QYNPLGKVPALVTEEGECWFDSPIIAEYIELLNV--APAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQS 119 (202)
T ss_pred hcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence 359999999 578999999988 9987632 23689988888888888877764332110
Q ss_pred -----hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 339 -----SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 339 -----~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
...+.+...|..||++|.+.. ++|+++|+|||.+++.+.
T Consensus 120 ~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~ 163 (202)
T PRK10357 120 EDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVG 163 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHH
Confidence 123456778899999998777 999999999999987765
No 74
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.33 E-value=5.9e-07 Score=76.82 Aligned_cols=65 Identities=15% Similarity=0.303 Sum_probs=52.7
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH------hhhcchhhhhhHhhhhhhcc
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE------LTLQSKEKHQHVSRWFNHVQ 219 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~------l~~~~~~~~P~L~rw~~rv~ 219 (387)
+...+.+.+.++.|++.|++++||+||++|.||+++++.+.++... +. .....||||.+|.+||.
T Consensus 56 ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 56 DQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HHHHhCcHHHHHHHhcC
Confidence 3455677889999999999999999999999999999988776422 11 12568999999999983
No 75
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=7.9e-07 Score=84.18 Aligned_cols=100 Identities=15% Similarity=0.220 Sum_probs=79.5
Q ss_pred cccccccchhhHHHHHHHhhccccee------e--------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHH
Q psy4819 127 SDILWSSKEEEFLIKQWIEYTNSHIL------H--------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYS 192 (387)
Q Consensus 127 ~~L~g~~~~erA~v~~Wl~f~~s~l~------g--------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~ 192 (387)
..|+|.. -|.+|+.|.+++-..+. | +.+...+-..|+.||+.|+++.||+||++|-||+-++++
T Consensus 165 ~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftT 242 (324)
T COG0435 165 VDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTT 242 (324)
T ss_pred cccCCHH--HHHHHHHHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhhe
Confidence 5688855 48999999999877665 1 445566777889999999999999999999999999998
Q ss_pred HHHHHH----H--hhhcchhhhhhHhhhhhhccCCCccccCC
Q psy4819 193 LISVFK----E--LTLQSKEKHQHVSRWFNHVQSLPEVRLGN 228 (387)
Q Consensus 193 l~~~~~----~--l~~~~~~~~P~L~rw~~rv~~rP~~k~~l 228 (387)
+...-. + ++.....+||||..|...+-+.|+|+...
T Consensus 243 lvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~ 284 (324)
T COG0435 243 LVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETV 284 (324)
T ss_pred eEeecceEEeeeecccchhhcCchHHHHHHHHhcCccccccc
Confidence 865321 1 23333457999999999999999998765
No 76
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.23 E-value=1.1e-06 Score=76.43 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=53.9
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhh----cchhhhhhHhhhhhhccC
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTL----QSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~----~~~~~~P~L~rw~~rv~~ 220 (387)
+...+.+.+.++.|++.|++++|++||++|.+|+++++.+..+... ++. ....+||||.+|++||.+
T Consensus 63 ~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 63 AEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 3455677889999999999999999999999999999888766532 320 124689999999999975
No 77
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.14 E-value=2.2e-06 Score=75.25 Aligned_cols=49 Identities=18% Similarity=0.352 Sum_probs=38.8
Q ss_pred hccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccC
Q psy4819 172 SKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 172 ~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~ 220 (387)
++++|++|+++|||||++++.+..+....+......||+|.+|++||.+
T Consensus 97 ~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 97 KDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHHHHH
Confidence 4568999999999999999998765432122245689999999999975
No 78
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=97.99 E-value=1.4e-06 Score=67.24 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=51.6
Q ss_pred cceeecccccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCcccccc-chHHHH---HHHHhhhc
Q psy4819 52 LDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTE-NLYLWK---LFQAISSA 122 (387)
Q Consensus 52 ~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e-~~~l~~---il~YLa~~ 122 (387)
|+||+.|++|+. ++|++ .|.+|+ ...+|... +.+.+|+.+||.+.+|.+.++ +..+++ |++||+++
T Consensus 1 ~~Ly~~~~~~~~~v~~~l~~---~~i~~~--~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~ 75 (77)
T cd03057 1 MKLYYSPGACSLAPHIALEE---LGLPFE--LVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADL 75 (77)
T ss_pred CEEEeCCCCchHHHHHHHHH---cCCCce--EEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHh
Confidence 689999988874 77887 489995 45688754 456789999998888877654 455554 78999988
Q ss_pred cc
Q psy4819 123 NV 124 (387)
Q Consensus 123 y~ 124 (387)
||
T Consensus 76 ~p 77 (77)
T cd03057 76 HP 77 (77)
T ss_pred Cc
Confidence 75
No 79
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=97.96 E-value=8.4e-06 Score=66.12 Aligned_cols=64 Identities=23% Similarity=0.364 Sum_probs=45.6
Q ss_pred cchhhHHHHHHHhhcc-----------cceeehhhhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHHHhHhhh
Q psy4819 317 SKEEEFLIKQWIEYTN-----------SHILHASVSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 317 ~~~~sa~i~qW~~y~~-----------~~~~~~~~~n~~~~~lqrLd~~L~k~t--FlVg~~lTlADI~v~~~l~~~ 380 (387)
++...+.|.+|+.|+. .....-...+.+...++.+|.+|..+. |++|+.+|+||++||+.|+..
T Consensus 2 ~~~~~a~i~~W~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~ 78 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSVAFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASL 78 (99)
T ss_dssp --TTHHHHHHHHH-GHCCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccchhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHH
Confidence 3445778889988661 000111356668999999999999999 999999999999999988554
No 80
>KOG0868|consensus
Probab=97.94 E-value=1.3e-05 Score=71.61 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=81.9
Q ss_pred eeeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh-------------
Q psy4819 277 YSTITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA------------- 338 (387)
Q Consensus 277 ~~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~------------- 338 (387)
+=|+-||.+++| -+|..|.|+-+| |+-+.-+ ..+++++++..++.+.+=...--+++++-
T Consensus 48 ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P--~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~ 125 (217)
T KOG0868|consen 48 EFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYP--DPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKE 125 (217)
T ss_pred HHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCC--CCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccc
Confidence 346789999999 789999999999 9988733 36999999999887777655555556553
Q ss_pred ------hhhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHHHhHhhh
Q psy4819 339 ------SVSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 ------~~~n~~~~~lqrLd~~L~k~t--FlVg~~lTlADI~v~~~l~~~ 380 (387)
=+.+-+..-|+.||..|.+++ |.||+.+|+|||.+..-++.+
T Consensus 126 ~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA 175 (217)
T KOG0868|consen 126 PGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNA 175 (217)
T ss_pred cchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhh
Confidence 155668888999999888775 999999999999997776655
No 81
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=97.91 E-value=2.5e-06 Score=65.39 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=51.3
Q ss_pred cceeecccccce---eeeeeecCCCceeEEEEEEeecC--CCCCcceeeeccCCCCccccccchHHHH---HHHHhhhcc
Q psy4819 52 LDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLD--NQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~--~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y 123 (387)
|+||+.|++|+. ++|++ .|.+|+. ..+|+. .+.+.+|+.+||.+.+|.+.+++..+++ |++||+++|
T Consensus 1 ~~l~~~~~~~~~~v~~~l~~---~~i~~~~--~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~ 75 (76)
T cd03046 1 ITLYHLPRSRSFRILWLLEE---LGLPYEL--VLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKY 75 (76)
T ss_pred CEEEeCCCCChHHHHHHHHH---cCCCcEE--EEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhC
Confidence 689999988874 77887 4899954 557875 3566789999999999887655544443 789999877
Q ss_pred c
Q psy4819 124 V 124 (387)
Q Consensus 124 ~ 124 (387)
+
T Consensus 76 ~ 76 (76)
T cd03046 76 G 76 (76)
T ss_pred c
Confidence 4
No 82
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=97.91 E-value=1.3e-05 Score=65.16 Aligned_cols=67 Identities=21% Similarity=0.383 Sum_probs=54.4
Q ss_pred ccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 312 DILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 312 ~llg~~~~~sa~i~qW~~y~~~~~~~~~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
.++|++..+.+.+++|+++....+.. .....+...++.||++|.++.|++|+++|+|||+++..+..
T Consensus 9 ~~~~~~~~~~~~vd~~~d~~~~~l~~-~~~~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~ 75 (96)
T cd03200 9 GPAPNAPNAATNIDSWVDTAIFQLAE-GSSKEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQ 75 (96)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHH
Confidence 58889999999999999976533221 23344678999999999999999999999999999987753
No 83
>KOG2903|consensus
Probab=97.89 E-value=4.8e-06 Score=78.27 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=76.1
Q ss_pred cccccccchhhHHHHHHHhhccccee------e--------hhhhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHH
Q psy4819 127 SDILWSSKEEEFLIKQWIEYTNSHIL------H--------ASVSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMY 190 (387)
Q Consensus 127 ~~L~g~~~~erA~v~~Wl~f~~s~l~------g--------~~a~~~l~~~L~~Le~~L~~~~--yLvGd~~TlADi~l~ 190 (387)
-.|+|.+ -+++|++|.+|.-..+. | +.....+-..|+.+|++|+++. |++|+++|-|||.++
T Consensus 163 lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy 240 (319)
T KOG2903|consen 163 LDLYPSS--LRAQIDETNSWVYDKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLY 240 (319)
T ss_pred cccCCHH--HHHHHhhhhceecccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeee
Confidence 4677754 48999999999876654 1 3455566677888889999876 999999999999999
Q ss_pred HHHHHHHHH------hh-hcchhhhhhHhhhhhhccC-CCccccCC
Q psy4819 191 YSLISVFKE------LT-LQSKEKHQHVSRWFNHVQS-LPEVRLGN 228 (387)
Q Consensus 191 ~~l~~~~~~------l~-~~~~~~~P~L~rw~~rv~~-rP~~k~~l 228 (387)
+++.+.-.. .. ...++.||+|..|...+-. .|+|+...
T Consensus 241 ~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 241 TTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred eeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchhhcc
Confidence 887543211 12 2346799999999999977 89988654
No 84
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=97.88 E-value=2.5e-06 Score=66.57 Aligned_cols=69 Identities=14% Similarity=0.250 Sum_probs=52.4
Q ss_pred ccceeecccccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCcccccc---chHHHH---HHHHh
Q psy4819 51 FLDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTE---NLYLWK---LFQAI 119 (387)
Q Consensus 51 ~~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e---~~~l~~---il~YL 119 (387)
||+||..|++|+. ++|++ .|++|+. +.+++.. ..+.+|+.+||.+.+|.+.++ +..+++ |++||
T Consensus 1 ~~~Ly~~~~~~~~~v~~~l~~---~gl~~~~--~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL 75 (81)
T cd03048 1 MITLYTHGTPNGFKVSIMLEE---LGLPYEI--HPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYL 75 (81)
T ss_pred CeEEEeCCCCChHHHHHHHHH---cCCCcEE--EEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHH
Confidence 6899999988774 78888 4899954 5577643 556789999999998887665 445553 78999
Q ss_pred hhccc
Q psy4819 120 SSANV 124 (387)
Q Consensus 120 a~~y~ 124 (387)
+++|+
T Consensus 76 ~~~~~ 80 (81)
T cd03048 76 AEKYD 80 (81)
T ss_pred HHHhC
Confidence 99875
No 85
>KOG1147|consensus
Probab=97.88 E-value=4.1e-06 Score=85.61 Aligned_cols=98 Identities=18% Similarity=0.321 Sum_probs=73.6
Q ss_pred cccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHH-Hhhhcch
Q psy4819 127 SDILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFK-ELTLQSK 205 (387)
Q Consensus 127 ~~L~g~~~~erA~v~~Wl~f~~s~l~g~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~-~l~~~~~ 205 (387)
..|+|.+ .++.+|+.|++|+.. .....+...+..++.+|.-++||+|.++|+||++++..+..-.. .......
T Consensus 66 ~~lf~~~-~d~~~vd~w~~~s~~-----~~~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~ 139 (712)
T KOG1147|consen 66 PKLFGNN-IDRSQVDHWVSFSST-----FSFDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAK 139 (712)
T ss_pred HhHcCCc-ccHHHHHHHHHHhhh-----cchHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhh
Confidence 4699987 899999999999964 23567788899999999999999999999999999998875211 1001112
Q ss_pred hhhhhHhhhhhhccCCCccccCCcE
Q psy4819 206 EKHQHVSRWFNHVQSLPEVRLGNPV 230 (387)
Q Consensus 206 ~~~P~L~rw~~rv~~rP~~k~~l~~ 230 (387)
..+-+|.||++-....++.+.++..
T Consensus 140 k~~~~v~Rw~~~~~~~~a~~~v~~t 164 (712)
T KOG1147|consen 140 KDYQNVERWYDLPEFQEAHNKVLAT 164 (712)
T ss_pred CCchhhhhhcCcHhHHHHHHHHHHH
Confidence 3678999999955555555555443
No 86
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=97.86 E-value=2.2e-06 Score=66.11 Aligned_cols=63 Identities=10% Similarity=0.135 Sum_probs=47.2
Q ss_pred cceeecccccc----eeeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHh
Q psy4819 52 LDLRVLQGSCE----QILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAI 119 (387)
Q Consensus 52 ~~Ly~~pGacs----~i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YL 119 (387)
++||+.+++|+ .++|+++ |++|+. ..+|+.. +.+++|+++||.|.||.+.+++..+++ |++||
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~---gl~~e~--~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yL 72 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEK---GLRCEE--YDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYL 72 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHc---CCCCEE--EEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHh
Confidence 47999999954 3888884 899955 5577743 556789999999999888666655554 67776
No 87
>PLN02378 glutathione S-transferase DHAR1
Probab=97.81 E-value=4.2e-05 Score=70.89 Aligned_cols=98 Identities=11% Similarity=0.016 Sum_probs=66.4
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhc-----ccceeehhhhhHHHHH
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYT-----NSHILHASVSQVTSHV 347 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~-----~~~~~~~~~~n~~~~~ 347 (387)
=++.||.|++| -+|+.|.|+-+| |+++.-+. .++ .+..+.+.+.+++... ......-...+.+...
T Consensus 51 ~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~--~~l--~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (213)
T PLN02378 51 FLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD--PPL--KTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVE 126 (213)
T ss_pred HHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC--CCC--CCHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHH
Confidence 45689999999 677899999988 99887422 122 2445555555543211 0000001233456778
Q ss_pred HHHHhhhhh--ccceeeeccchhhHHHHHHhHhh
Q psy4819 348 LNELNQVFS--KQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 348 lqrLd~~L~--k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
|..||++|. +..|++|+++|+|||+++..+..
T Consensus 127 l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~ 160 (213)
T PLN02378 127 LEALENHLKSHDGPFIAGERVSAVDLSLAPKLYH 160 (213)
T ss_pred HHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHH
Confidence 999999998 46899999999999999877543
No 88
>PTZ00057 glutathione s-transferase; Provisional
Probab=97.80 E-value=4.1e-05 Score=70.48 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=62.5
Q ss_pred eccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhccc-cee----e---------hhh
Q psy4819 280 ITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNS-HIL----H---------ASV 340 (387)
Q Consensus 280 ~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~-~~~----~---------~~~ 340 (387)
..+|++++| -+|+.|.|+.+| |+++.-. +.|.+. ...+..|..+... ... . -..
T Consensus 52 ~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (205)
T PTZ00057 52 KDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYK-----ICGESE--LNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFL 124 (205)
T ss_pred CCCCCCCCCEEEECCEEEecHHHHHHHHHHHcC-----CCCCCH--HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 469999999 678999999988 9998832 223332 2222223222211 000 0 013
Q ss_pred hhHHHHHHHHHhhhhhcc--ceeeeccchhhHHHHHHhHhh
Q psy4819 341 SQVTSHVLNELNQVFSKQ--SFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~--tFlVg~~lTlADI~v~~~l~~ 379 (387)
...+..++..||+.|.++ .|++|+++|+||+.++..+..
T Consensus 125 ~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~ 165 (205)
T PTZ00057 125 NEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDD 165 (205)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHH
Confidence 355788889999999865 799999999999999876643
No 89
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=97.69 E-value=6e-05 Score=61.83 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
.+.+.+.++.||++|.++.|++|+.+|+|||+++..+..
T Consensus 45 ~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~ 83 (114)
T cd03188 45 RERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRW 83 (114)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHH
Confidence 345788889999999989999999999999999877653
No 90
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=97.67 E-value=4.5e-06 Score=64.79 Aligned_cols=68 Identities=9% Similarity=0.123 Sum_probs=47.1
Q ss_pred ccceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccccc--chHHHH---HHHHhhh
Q psy4819 51 FLDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTE--NLYLWK---LFQAISS 121 (387)
Q Consensus 51 ~~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e--~~~l~~---il~YLa~ 121 (387)
||+||..+++ |.. ++|+++ |.+|+. ..++...+...+++++||.+++|.+.++ +..+++ |++||++
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~---gi~y~~--~~v~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~ 75 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTEL---ELDVIL--YPCPKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFK 75 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHc---CCcEEE--EECCCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHH
Confidence 6899999877 553 788884 899954 3343333345678899998899887653 345554 7889987
Q ss_pred cc
Q psy4819 122 AN 123 (387)
Q Consensus 122 ~y 123 (387)
+|
T Consensus 76 ~~ 77 (77)
T cd03041 76 TY 77 (77)
T ss_pred hC
Confidence 64
No 91
>PRK10387 glutaredoxin 2; Provisional
Probab=97.67 E-value=7.4e-05 Score=68.46 Aligned_cols=95 Identities=11% Similarity=0.065 Sum_probs=67.6
Q ss_pred eccCCCCcc----ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceeeh---------------
Q psy4819 280 ITNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHA--------------- 338 (387)
Q Consensus 280 ~k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~--------------- 338 (387)
..+|.+++| .+|+.|.|+.+| |+.+.-+ .+++. ...++.+.+|+.+........
T Consensus 41 ~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~---~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (210)
T PRK10387 41 RMIGQKQVPILQKDDGSYMPESLDIVHYIDELDG---KPLLT--GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFAT 115 (210)
T ss_pred HhcCCcccceEEecCCeEecCHHHHHHHHHHhCC---CccCC--CcccHHHHHHHHHHHHHhhcchhcccccCCCcccCC
Confidence 467888998 578999999988 9988732 23443 134677777766543222100
Q ss_pred --------------------------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 339 --------------------------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 --------------------------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.....+.+.|+.||++|.+ .|++|+++|+|||.+++.+...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~ 182 (210)
T PRK10387 116 PSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNL 182 (210)
T ss_pred HHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcc
Confidence 0123467788999999876 9999999999999999887654
No 92
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.66 E-value=3.3e-05 Score=64.41 Aligned_cols=92 Identities=10% Similarity=0.135 Sum_probs=65.8
Q ss_pred cchhhHHHHHHHhhccccee--------------------ehhhhhHHHHHHHHHhhhhhc-cceeeeccchhhHHHHHH
Q psy4819 133 SKEEEFLIKQWIEYTNSHIL--------------------HASVSQVTSHVLNELNQVFSK-QSFLVADRFTLADVFMYY 191 (387)
Q Consensus 133 ~~~erA~v~~Wl~f~~s~l~--------------------g~~a~~~l~~~L~~Le~~L~~-~~yLvGd~~TlADi~l~~ 191 (387)
|..+||+.++...|+.|++. .+.+...+.+++...+..|.. ++||.| .+||||..++.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHH
Confidence 35678888888888777664 156777888888888888865 579999 58999999999
Q ss_pred HHHHHHHHhhhcchhhhhhHhhhhhhccCCCccccCCc
Q psy4819 192 SLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVRLGNP 229 (387)
Q Consensus 192 ~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k~~l~ 229 (387)
++..+... .+. --+.+.+|.+++-+||+|++.+.
T Consensus 80 ml~Rl~~~--gd~--vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTY--GDP--VPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTT--T------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHc--CCC--CCHHHHHHHHHHHCCHHHHHHHH
Confidence 99886543 111 12579999999999999998653
No 93
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.65 E-value=6.7e-05 Score=62.82 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=50.8
Q ss_pred ccchhhHHHHHHHhhcccceeehh----------------hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 316 SSKEEEFLIKQWIEYTNSHILHAS----------------VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 316 ~~~~~sa~i~qW~~y~~~~~~~~~----------------~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
+++..++.+.||+.+++.+..+.. ....+.+.++.||+.|.++.|++|+++|+|||.+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~ 80 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVR 80 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHH
Confidence 356678999999999887765421 234688889999999999999999999999999987653
No 94
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=97.57 E-value=1.4e-05 Score=60.95 Aligned_cols=65 Identities=15% Similarity=0.289 Sum_probs=47.1
Q ss_pred cceeeccccc-c---eeeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 52 LDLRVLQGSC-E---QILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~pGac-s---~i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
|+||+.|+++ + .++|++ .|++|+. +.+|+.. +..++|+.+||.|.+|.+.+++..+++ |++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~---~gi~~e~--~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKA---LGLELNL--KEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHH---cCCCCEE--EEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 6899999873 3 388888 4899954 5577744 456789999999999887655544443 7888864
No 95
>KOG1147|consensus
Probab=97.56 E-value=6.4e-05 Score=77.12 Aligned_cols=75 Identities=17% Similarity=0.334 Sum_probs=61.2
Q ss_pred HHHHhhhccccccccccccchhhHHHHHHHhhcccceeehhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 299 LFQAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILHASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 299 ~~Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~~~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
..|++..+ ++-..+||++ .++.+|..|++|+.. .+...+...+.+||.+|.-+||+||+++|+||.++|++|+
T Consensus 55 ~~~~~~~~-~~~~~lf~~~-~d~~~vd~w~~~s~~-----~~~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~ 127 (712)
T KOG1147|consen 55 VVYSAALA-KADPKLFGNN-IDRSQVDHWVSFSST-----FSFDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALH 127 (712)
T ss_pred hhhhhhhc-ccCHhHcCCc-ccHHHHHHHHHHhhh-----cchHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHh
Confidence 34777553 2224599999 679999999999864 3445578888999999999999999999999999999999
Q ss_pred hh
Q psy4819 379 SV 380 (387)
Q Consensus 379 ~~ 380 (387)
+.
T Consensus 128 ~n 129 (712)
T KOG1147|consen 128 SN 129 (712)
T ss_pred cc
Confidence 74
No 96
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=97.54 E-value=0.00021 Score=68.83 Aligned_cols=96 Identities=11% Similarity=0.053 Sum_probs=67.3
Q ss_pred eeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccce-eeh----hhhhHHHHHH
Q psy4819 279 TITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHI-LHA----SVSQVTSHVL 348 (387)
Q Consensus 279 k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~-~~~----~~~n~~~~~l 348 (387)
++.||.+++| -++..|.|+.+| |+++.-+. .++ .+..+++.+.+|+-..-... ... .....+...|
T Consensus 105 l~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~--~~L--~~~~era~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 180 (265)
T PLN02817 105 LKISPEGKVPVVKLDEKWVADSDVITQALEEKYPD--PPL--ATPPEKASVGSKIFSTFIGFLKSKDPGDGTEQALLDEL 180 (265)
T ss_pred HhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC--CCC--CCHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 6789999999 566799999988 99887433 233 25667788887743211000 000 1123456778
Q ss_pred HHHhhhhhc-cceeeeccchhhHHHHHHhHh
Q psy4819 349 NELNQVFSK-QSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 349 qrLd~~L~k-~tFlVg~~lTlADI~v~~~l~ 378 (387)
..||++|.+ +.|++|+++|+|||+++..|.
T Consensus 181 ~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~ 211 (265)
T PLN02817 181 TSFDDYIKENGPFINGEKISAADLSLGPKLY 211 (265)
T ss_pred HHHHHHHhcCCCeeCCCCCCHHHHHHHHHHH
Confidence 999999974 689999999999999987664
No 97
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=97.50 E-value=1.9e-05 Score=60.83 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=48.3
Q ss_pred cceeecccccc----eeeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhhhc
Q psy4819 52 LDLRVLQGSCE----QILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSA 122 (387)
Q Consensus 52 ~~Ly~~pGacs----~i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~ 122 (387)
|+||..|++++ .++|++ .|.+|+. ..+|+.+ +..++|..+||.+.+|.+.+++..+++ |++||+++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~---~g~~~~~--~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~ 75 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKL---NKIPFEE--CPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARK 75 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHH---cCCCcEE--EEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 57999998844 277888 4899954 5688754 334578889999888887655544443 78999876
Q ss_pred c
Q psy4819 123 N 123 (387)
Q Consensus 123 y 123 (387)
|
T Consensus 76 ~ 76 (76)
T cd03050 76 F 76 (76)
T ss_pred C
Confidence 4
No 98
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=97.48 E-value=1.9e-05 Score=59.90 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=46.9
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhcc
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y 123 (387)
|+||..+++ ++ .++|++ .|.+|+. ..+|+. +.+++|+.+||.|++|.+.+++..+++ |++||+++|
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~---~gi~~~~--~~v~~~-~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAE---KGVSVEI--IDVDPD-NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHH---cCCccEE--EEcCCC-CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 689988865 33 277887 4899954 457765 456788999998888877655544443 789998764
No 99
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=97.46 E-value=0.00016 Score=60.00 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 343 VTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 343 ~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
.+...|..||.+|.++.|++|+.+|+|||.++..+..
T Consensus 58 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~ 94 (119)
T cd03189 58 ELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEA 94 (119)
T ss_pred HHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHH
Confidence 4677888999999999999999999999999766544
No 100
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=97.43 E-value=0.00019 Score=59.80 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
....+.+.|+.||++|.++.|++|+++|+|||.++..+..+
T Consensus 39 ~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~ 79 (118)
T cd03177 39 KLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTL 79 (118)
T ss_pred HHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHH
Confidence 44567889999999998889999999999999998776543
No 101
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=97.42 E-value=2.9e-05 Score=59.78 Aligned_cols=64 Identities=8% Similarity=0.115 Sum_probs=47.3
Q ss_pred ceeeccc-ccce---eeeeeecCCCceeEEEEEEeecCC-CCCcceeeeccCCCCcccccc-chHHHH---HHHHhhh
Q psy4819 53 DLRVLQG-SCEQ---ILFEKQSGGGGNFQISCRILDLDN-QDPVQYSTITNSNDIKPLKTE-NLYLWK---LFQAISS 121 (387)
Q Consensus 53 ~Ly~~pG-acs~---i~lee~~~~G~~~~~~~~~vd~~~-~~~~~yl~inp~~~v~pl~~e-~~~l~~---il~YLa~ 121 (387)
+||+.|+ .|+. ++|++ .|.+|+. ..+|+.. +.+++|+++||.+.+|.+.++ +..+++ |++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~---~gi~~~~--~~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKY---NGLDVEI--VDFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHH---cCCceEE--EecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 6899998 4664 78887 3899954 5688753 667789999999999888653 444443 7888875
No 102
>KOG1695|consensus
Probab=97.39 E-value=0.00036 Score=64.69 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=72.7
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceee-h-------------
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILH-A------------- 338 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~-~------------- 338 (387)
-|.+.|++.|| =||+.|..+.+| |++.. -++.|+|..+.+|++...+--.+.... +
T Consensus 43 ~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk-----~gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~ 117 (206)
T KOG1695|consen 43 LKDKMPFGQLPVLEVDGKKLVQSRAILRYLARK-----FGLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSE 117 (206)
T ss_pred hcccCCCCCCCEEeECCEeeccHHHHHHHHHHH-----hCcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccch
Confidence 35569999999 889999999988 99987 468899999998887765422111111 1
Q ss_pred -----hhhhHHHHHHHHHhhhhh--ccceeeeccchhhHHHHHHhHhhh
Q psy4819 339 -----SVSQVTSHVLNELNQVFS--KQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 -----~~~n~~~~~lqrLd~~L~--k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
........+++.++.-|. +.-|+||+.+|.||+.++-.+...
T Consensus 118 ~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l 166 (206)
T KOG1695|consen 118 EELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTL 166 (206)
T ss_pred hhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHH
Confidence 011135678888888888 556999999999999998776543
No 103
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.39 E-value=0.00024 Score=57.77 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
...+...|+.||++|.+..|++|+++|+|||.+++.+.
T Consensus 45 ~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~ 82 (110)
T cd03180 45 LAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAY 82 (110)
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHH
Confidence 44578899999999998899999999999999987764
No 104
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=97.38 E-value=0.00021 Score=62.08 Aligned_cols=59 Identities=24% Similarity=0.386 Sum_probs=44.6
Q ss_pred hHHHHHHHhhcccceeeh--------------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 321 EFLIKQWIEYTNSHILHA--------------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 321 sa~i~qW~~y~~~~~~~~--------------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
++.|.+|++|....+.+. .....+...|+.||++|.++.|++|+++|+|||.++..+..
T Consensus 5 ~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~ 77 (142)
T cd03190 5 RSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIR 77 (142)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHH
Confidence 555777776665444332 13345788889999999999999999999999999877654
No 105
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=97.33 E-value=3.2e-05 Score=58.84 Aligned_cols=65 Identities=8% Similarity=0.141 Sum_probs=46.0
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
|+||+.+++ ++ .++|++ .|.+|+. ..+|+..+...+|..+||.+++|.+.+++..+++ |++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~---~gi~~e~--~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLAD---AGVEYED--VRITYEEWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHH---CCCCcEE--EEeCHHHhhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 589988865 33 378887 4999954 5577765555568899999999887665544443 7888863
No 106
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.32 E-value=0.00036 Score=56.31 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
..+.+...++.||..|....|++|+.+|+|||+++..+..
T Consensus 44 ~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~ 83 (105)
T cd03179 44 LRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHV 83 (105)
T ss_pred HHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHh
Confidence 4445778889999999888999999999999999876654
No 107
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=97.31 E-value=2.8e-05 Score=60.28 Aligned_cols=66 Identities=14% Similarity=0.272 Sum_probs=46.4
Q ss_pred cccceeecccccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccC-CCCcccccc-chHHHH---HHHHh
Q psy4819 50 EFLDLRVLQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNS-NDIKPLKTE-NLYLWK---LFQAI 119 (387)
Q Consensus 50 ~~~~Ly~~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~-~~v~pl~~e-~~~l~~---il~YL 119 (387)
|.|+||..+| ++. ++|++ .|.+|+. ..+|+.. +..++|+++||. |.+|.+.++ +..+++ |++||
T Consensus 1 ~~l~l~~~~~-~~~~~r~~l~~---~gv~~e~--~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YL 74 (76)
T PF02798_consen 1 MTLTLYNGRG-RSERIRLLLAE---KGVEYED--VRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYL 74 (76)
T ss_dssp EEEEEESSST-TTHHHHHHHHH---TT--EEE--EEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHH
T ss_pred CEEEEECCCC-chHHHHHHHHH---hcccCce--EEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHh
Confidence 4578888888 553 78887 5899955 5688854 344889999999 888887666 544443 78898
Q ss_pred hh
Q psy4819 120 SS 121 (387)
Q Consensus 120 a~ 121 (387)
++
T Consensus 75 a~ 76 (76)
T PF02798_consen 75 AR 76 (76)
T ss_dssp HH
T ss_pred CC
Confidence 74
No 108
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=97.31 E-value=0.00034 Score=57.73 Aligned_cols=40 Identities=30% Similarity=0.361 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
...+...++.||.+|.+..|++|+++|+|||.+++.+...
T Consensus 47 ~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~ 86 (118)
T cd03187 47 EEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYL 86 (118)
T ss_pred HHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHH
Confidence 3457888899999999989999999999999998776554
No 109
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=97.25 E-value=5.2e-05 Score=57.92 Aligned_cols=64 Identities=13% Similarity=0.225 Sum_probs=45.2
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecC--CCCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLD--NQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~--~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
|+||..+++ |+ .++|++ .|.+|+. +.+++. .+..++|..+||.|.+|.+.+++..+++ |++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~---~~l~~~~--~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDE---LGLPYER--IDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHH---cCCCCEE--EEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 589999988 44 288888 4899954 556653 2456788999999988887655544443 677874
No 110
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.25 E-value=0.00019 Score=58.08 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=33.9
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
....+...++.+|+.|.++.|++|+.+|+|||.++..+.
T Consensus 34 ~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~ 72 (100)
T cd03206 34 AIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVA 72 (100)
T ss_pred HHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHH
Confidence 345678899999999999999999999999999877664
No 111
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=97.25 E-value=0.00038 Score=56.80 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=44.0
Q ss_pred hhHHHHHHHhhcccceeeh-------------hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHh
Q psy4819 320 EEFLIKQWIEYTNSHILHA-------------SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 320 ~sa~i~qW~~y~~~~~~~~-------------~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~ 378 (387)
+++.+.+|+.|.+..+.+. .....+.+.|+.||.+|....|++|+++|+|||+++..+.
T Consensus 3 ~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~ 74 (107)
T cd03186 3 ARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLW 74 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHH
Confidence 3566666766665544321 1333477788999999999999999999999999988764
No 112
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=97.22 E-value=0.00039 Score=57.43 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=33.4
Q ss_pred hHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 342 QVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 342 n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
..+...|..||++|.++.|++|+++|+|||.+++.+..
T Consensus 52 ~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~ 89 (117)
T cd03182 52 ARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDF 89 (117)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHH
Confidence 44778889999999989999999999999999877754
No 113
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=97.21 E-value=0.00034 Score=55.55 Aligned_cols=41 Identities=22% Similarity=0.354 Sum_probs=35.9
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+...|+.+|..|.++.|++|+++|+|||+++..+..+
T Consensus 29 ~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~ 69 (95)
T PF00043_consen 29 ARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWL 69 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHH
Confidence 56678999999999999999999999999999999887654
No 114
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=97.20 E-value=0.0007 Score=64.14 Aligned_cols=103 Identities=16% Similarity=0.117 Sum_probs=67.0
Q ss_pred eeeccCCCCcc---ccccchHHHHHH--HHhhhcccc-ccccccccchhhH----HHHHHHhhccccee-e-hhhhhHHH
Q psy4819 278 STITNSNDIKP---LKTENLYLWKLF--QAISSANVK-RSDILWSSKEEEF----LIKQWIEYTNSHIL-H-ASVSQVTS 345 (387)
Q Consensus 278 ~k~k~Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~-~~~llg~~~~~sa----~i~qW~~y~~~~~~-~-~~~~n~~~ 345 (387)
=++.||.+++| -+|+.|.|+.+| |+.+.-... -.+++.++....+ ++..+..|-..... . -.....+.
T Consensus 50 fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 129 (236)
T TIGR00862 50 LQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGLDIFAKFSAYIKNSNPEANDNLEKGLL 129 (236)
T ss_pred HHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 36679999999 668999999988 998764211 1234554544422 22222222111000 0 01233467
Q ss_pred HHHHHHhhhhh------------------ccceeeeccchhhHHHHHHhHhhh
Q psy4819 346 HVLNELNQVFS------------------KQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 346 ~~lqrLd~~L~------------------k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..++.||++|. ++.|+.|+++|+|||+++..|+.+
T Consensus 130 ~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l 182 (236)
T TIGR00862 130 KALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIV 182 (236)
T ss_pred HHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHH
Confidence 88899999986 578999999999999998887654
No 115
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=97.20 E-value=0.00031 Score=57.72 Aligned_cols=41 Identities=12% Similarity=0.365 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+...++.||..|..+.|++|+++|+|||.+++.+...
T Consensus 41 ~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~ 81 (113)
T cd03178 41 YTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRL 81 (113)
T ss_pred HHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHH
Confidence 44557888999999999899999999999999998776554
No 116
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=97.18 E-value=0.00041 Score=58.08 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
....+...++.||..|.++.|++|+++|+|||.+++.+..
T Consensus 36 ~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~ 75 (126)
T cd03185 36 AKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGW 75 (126)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHH
Confidence 3445677889999999988999999999999999876654
No 117
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=97.17 E-value=5.9e-05 Score=57.85 Aligned_cols=64 Identities=9% Similarity=0.135 Sum_probs=44.5
Q ss_pred cceeecc-cccc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 52 LDLRVLQ-GSCE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~p-Gacs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
|+||+.+ .+|+ .++|++ .|.+|+. ..++++. ...++..+||.+.+|.+.+++..+++ |++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~---~~i~~e~--~~v~~~~-~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLAD---QGISWEE--ERVTYEE-WQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHH---cCCCCEE--EEecHHH-hhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 7899988 3455 377887 4899954 4577632 23478889988999887655544443 7889875
No 118
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=97.12 E-value=0.00086 Score=55.93 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhhhhhc--cceeeeccchhhHHHHHHhHhh
Q psy4819 342 QVTSHVLNELNQVFSK--QSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 342 n~~~~~lqrLd~~L~k--~tFlVg~~lTlADI~v~~~l~~ 379 (387)
..+...|+.||.+|.+ ..|++|+++|+|||+++..+..
T Consensus 47 ~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~ 86 (121)
T cd03191 47 HWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYN 86 (121)
T ss_pred HHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHH
Confidence 3468889999999984 4799999999999999977653
No 119
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=97.10 E-value=9.4e-05 Score=56.68 Aligned_cols=65 Identities=18% Similarity=0.307 Sum_probs=46.5
Q ss_pred cceeecccc-cce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 52 LDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
|+||..|.+ ||. ++|++ .|.+|+. ..+++.. +.+.+|..+||.|.+|.+.+++..+++ |++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~---~~i~~~~--~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEE---KGVDYEL--VPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHH---cCCCcEE--EEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhh
Confidence 789998844 664 78887 4899954 5577753 446678999999998887655433332 7888875
No 120
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=97.04 E-value=0.00013 Score=55.70 Aligned_cols=66 Identities=15% Similarity=0.051 Sum_probs=45.5
Q ss_pred cceeecccc-cce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccC-CCCccccccchHHHH---HHHHhhhcc
Q psy4819 52 LDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNS-NDIKPLKTENLYLWK---LFQAISSAN 123 (387)
Q Consensus 52 ~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~-~~v~pl~~e~~~l~~---il~YLa~~y 123 (387)
|+||..+.+ ++. ++|++ .|++|+. ..+|+. +++++|..+||. +.+|.+.+++..+++ |++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~---~gl~~~~--~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALAL---KGVPYEY--VEEDLG-NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHH---cCCCCEE--EEeCcc-cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 689988765 442 77887 4899955 446665 556778889985 788777655544443 788988753
No 121
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=97.04 E-value=0.00066 Score=50.93 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhhee
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFCT 383 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~~~ 383 (387)
...+.+.|..||.+|.++.|+.|+++|+|||+++..+......
T Consensus 8 ~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~ 50 (69)
T PF13410_consen 8 RAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFV 50 (69)
T ss_dssp HHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 4457888999999999999999999999999999988876543
No 122
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=97.04 E-value=0.0011 Score=61.15 Aligned_cols=96 Identities=9% Similarity=0.040 Sum_probs=63.3
Q ss_pred eeccCCCCcc----ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhccccee----e-----------
Q psy4819 279 TITNSNDIKP----LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHIL----H----------- 337 (387)
Q Consensus 279 k~k~Pl~~lP----~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~----~----------- 337 (387)
.+.+|.+++| .+|+.|.|+.+| |+.+.-+. +++.. ..+..+.+|+.+.+.... +
T Consensus 39 ~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (209)
T TIGR02182 39 IRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE---PLLTG--KVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFA 113 (209)
T ss_pred HHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC---ccCCC--CChHHHHHHHHHHHHHhhhhhccccccCCCcccC
Confidence 4568889998 467899999987 99886321 23321 134455666543221110 0
Q ss_pred --------------------------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 338 --------------------------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 338 --------------------------~~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
......+...|+.||.+|.++.|+.| .+|+|||.+++.+...
T Consensus 114 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~ 181 (209)
T TIGR02182 114 TQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNL 181 (209)
T ss_pred CHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCe
Confidence 01223467788999999999999954 6999999999887643
No 123
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=96.95 E-value=0.0012 Score=55.08 Aligned_cols=41 Identities=32% Similarity=0.474 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
....+...|+.||+.|..+.|++|+.+|+|||.+++.+...
T Consensus 41 ~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~ 81 (123)
T cd03181 41 ALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLG 81 (123)
T ss_pred HHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHH
Confidence 44457788999999999999999999999999998776554
No 124
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=96.87 E-value=0.0011 Score=52.21 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
..+.+...++.||+.|.++.|++|+++|+|||.++..+....
T Consensus 20 ~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~ 61 (88)
T cd03193 20 IYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASIL 61 (88)
T ss_pred HHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHH
Confidence 455678899999999999999999999999999988776543
No 125
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.83 E-value=0.001 Score=53.79 Aligned_cols=41 Identities=32% Similarity=0.327 Sum_probs=35.5
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
....+...++.||.+|.++.|++|+.+|+|||.++..+...
T Consensus 31 ~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~ 71 (103)
T cd03207 31 GFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWG 71 (103)
T ss_pred hhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHH
Confidence 34558999999999999999999999999999998766553
No 126
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=96.77 E-value=0.00026 Score=53.46 Aligned_cols=64 Identities=11% Similarity=0.154 Sum_probs=44.5
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
|+||+.|++ ++ .++|++ .|.+|+. ..+|+.. +.+.+|+.+||.+.+|.+.+++..+++ |++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~---~~~~~~~--~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLAL---LGIPYEW--VEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHH---cCCCcEE--EEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 689999987 33 278887 4899954 5577643 456788899999998887655433332 677763
No 127
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=96.66 E-value=0.00021 Score=55.01 Aligned_cols=66 Identities=12% Similarity=0.247 Sum_probs=47.4
Q ss_pred eeecccc--cc--eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhcccc
Q psy4819 54 LRVLQGS--CE--QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSANVK 125 (387)
Q Consensus 54 Ly~~pGa--cs--~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y~~ 125 (387)
||..++| |- .++|+++ |.+|+. ..++.... ..+|..+||.+.+|.+.+++..+++ |++||+++|++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~---~i~~~~--~~v~~~~~-~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEK---GIPYEL--VPVDPEEK-RPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHH---TEEEEE--EEEBTTST-SHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred CCCcCCChHHHHHHHHHHHc---CCeEEE--eccCcccc-hhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 6777777 33 2888884 888844 55665443 6678899999999887665544442 79999999986
No 128
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=96.65 E-value=0.00036 Score=52.72 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=43.0
Q ss_pred cceeecc-cccce---eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccccchHHHH---HHHHh
Q psy4819 52 LDLRVLQ-GSCEQ---ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAI 119 (387)
Q Consensus 52 ~~Ly~~p-Gacs~---i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YL 119 (387)
|+||..+ .+|++ ++|++ .|.+|+. ..+|+.. +...+|+.+||.+.+|.+.+++..+++ |++||
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~---~gi~~~~--~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL 72 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNL---KGLDYEY--VPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYL 72 (73)
T ss_pred CEEecCCCCcchHHHHHHHHH---cCCCCeE--EEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHh
Confidence 5889555 55885 88887 4899954 5577743 455688899998888877554433332 67776
No 129
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=96.65 E-value=0.0005 Score=55.55 Aligned_cols=56 Identities=9% Similarity=0.109 Sum_probs=41.7
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhhcccc
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISSANVK 125 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~~y~~ 125 (387)
++|+++ |.+|+. ..+|+.+ .|.+|+.+||-|.+|.+.+++..+.+ |++||.++++.
T Consensus 30 l~L~eK---gi~ye~--~~vd~~~-~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 30 MVLWLK---GVVFNV--TTVDMKR-KPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred HHHHHC---CCceEE--EEeCCCC-CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 888885 899954 4577754 46789999999888877555444443 79999999875
No 130
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=96.62 E-value=0.0021 Score=54.06 Aligned_cols=61 Identities=15% Similarity=0.258 Sum_probs=42.8
Q ss_pred chhhHHHHHHHhhcccceeeh-------hhhhHHHHHHHHHhhhhh---ccceeeeccchhhHHHHHHhHhh
Q psy4819 318 KEEEFLIKQWIEYTNSHILHA-------SVSQVTSHVLNELNQVFS---KQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 318 ~~~sa~i~qW~~y~~~~~~~~-------~~~n~~~~~lqrLd~~L~---k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
+.+++.|.||+.|.+....-+ ...+.+.+.+..||+.|. ++.|++| ++|+|||++++.+..
T Consensus 2 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~ 72 (120)
T cd03203 2 PAKREFADELLAYTDAFTKALYSSLIKGDPSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIER 72 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHH
Confidence 345778888877732211101 123456788899999887 4789999 999999999887753
No 131
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=96.59 E-value=0.0023 Score=53.60 Aligned_cols=41 Identities=27% Similarity=0.448 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHhhhhhccc----------eeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQS----------FLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~t----------FlVg~~lTlADI~v~~~l~~~ 380 (387)
....+...|+.||.+|.++. |++|+++|+|||.+++.+...
T Consensus 30 ~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~ 80 (111)
T cd03204 30 ILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRL 80 (111)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHH
Confidence 34457889999999998775 999999999999998877654
No 132
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=96.58 E-value=0.00038 Score=54.26 Aligned_cols=65 Identities=11% Similarity=0.149 Sum_probs=41.1
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCC----CCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDN----QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~----~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
.+||+.|++ |+ .++|++ .|.+|+. +.+|... ..+.++ +|.|.+|.+.+++..+++ |+.||+
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~---~gi~~e~--~~v~~~~~~~~~~~~~~---~~~g~vP~L~~~g~~l~ES~AI~~YL~ 73 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAA---AGVEFEE--KFIESAEDLEKLKKDGS---LMFQQVPMVEIDGMKLVQTRAILNYIA 73 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHH---cCCCcEE--EEeccHHHHHhhccccC---CCCCCCCEEEECCEEEeeHHHHHHHHH
Confidence 589999986 55 388888 4899954 4576532 122222 246677666444444443 799999
Q ss_pred hccc
Q psy4819 121 SANV 124 (387)
Q Consensus 121 ~~y~ 124 (387)
++|+
T Consensus 74 ~~~~ 77 (79)
T cd03077 74 GKYN 77 (79)
T ss_pred HHcC
Confidence 8864
No 133
>KOG3027|consensus
Probab=96.44 E-value=0.0076 Score=55.29 Aligned_cols=67 Identities=13% Similarity=0.251 Sum_probs=54.5
Q ss_pred hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hh----hcchhhhhhHhhhhhhccC
Q psy4819 154 ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LT----LQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 154 ~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~----~~~~~~~P~L~rw~~rv~~ 220 (387)
+...+++.+..+.|..+|+.++|+.|++.|=+|..++..+..+... +. ....+.|+||-++-.||.+
T Consensus 176 DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 176 DQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 3456778889999999999999999999999999999988766543 32 1245789999999998865
No 134
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=96.44 E-value=0.003 Score=49.81 Aligned_cols=40 Identities=25% Similarity=0.462 Sum_probs=35.2
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.+.+...++.||+.|.+..|++|+++|+|||.+++.+...
T Consensus 38 ~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~ 77 (100)
T cd00299 38 REELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARL 77 (100)
T ss_pred HHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHH
Confidence 4457889999999999999999999999999999888654
No 135
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=96.38 E-value=0.0033 Score=54.40 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHHhhhhhc----------------cceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSK----------------QSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k----------------~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+...|+.||.+|.+ +.|++|+++|+|||.++..|..+
T Consensus 30 ~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~ 86 (134)
T cd03198 30 LEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIV 86 (134)
T ss_pred HHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 445678889999999987 67999999999999999887743
No 136
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=96.36 E-value=0.00076 Score=50.83 Aligned_cols=63 Identities=11% Similarity=0.212 Sum_probs=43.3
Q ss_pred cceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCccccc-cchHHHH---HHHHh
Q psy4819 52 LDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKT-ENLYLWK---LFQAI 119 (387)
Q Consensus 52 ~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~-e~~~l~~---il~YL 119 (387)
|+||..|.+ ++ .++|.++ |++|+. ..+|+.. +...+|..+||.+.+|.+.. ++..+++ |++||
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~---~l~~~~--~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yL 73 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEK---GIDVPL--VTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYL 73 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHc---CCCceE--EEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHh
Confidence 689999854 44 3778874 899954 5577754 44567899999988888753 4444443 66776
No 137
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=96.20 E-value=0.00096 Score=53.19 Aligned_cols=66 Identities=8% Similarity=0.232 Sum_probs=44.7
Q ss_pred Cccccceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccccc-chHHHH---HHHHh
Q psy4819 48 TPEFLDLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTE-NLYLWK---LFQAI 119 (387)
Q Consensus 48 ~~~~~~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e-~~~l~~---il~YL 119 (387)
.+++|+||..+.+ ++ .++|++ .|++|+. ..+|+.. .+.+|..+||.+.+|.+.++ +..+++ |++||
T Consensus 15 ~~~~~~Ly~~~~sp~~~kv~~~L~~---~gl~~~~--~~v~~~~-~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yL 88 (89)
T cd03055 15 VPGIIRLYSMRFCPYAQRARLVLAA---KNIPHEV--ININLKD-KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYL 88 (89)
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHH---cCCCCeE--EEeCCCC-CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhh
Confidence 4668999998864 33 277887 4899954 4566654 34567889988888877654 444443 56776
No 138
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=96.11 E-value=0.0017 Score=49.79 Aligned_cols=60 Identities=5% Similarity=0.122 Sum_probs=40.0
Q ss_pred ccceeecccccc-----------eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HH
Q psy4819 51 FLDLRVLQGSCE-----------QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LF 116 (387)
Q Consensus 51 ~~~Ly~~pGacs-----------~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il 116 (387)
|++||..++++. .++|++ .|.+|+. ..++. ..+||.+.+|.+.+++..+++ |+
T Consensus 1 m~~L~~~~~~~~~~~~sp~~~~v~~~L~~---~gi~~~~--~~~~~--------~~~~p~g~vPvl~~~g~~l~eS~~I~ 67 (75)
T cd03080 1 MITLYQFPRAFGVPSLSPFCLKVETFLRM---AGIPYEN--KFGGL--------AKRSPKGKLPFIELNGEKIADSELII 67 (75)
T ss_pred CEEEEecCCCCCCCCCCHHHHHHHHHHHH---CCCCcEE--eecCc--------ccCCCCCCCCEEEECCEEEcCHHHHH
Confidence 679999987533 267777 4899954 33443 256788888777555444332 78
Q ss_pred HHhhhcc
Q psy4819 117 QAISSAN 123 (387)
Q Consensus 117 ~YLa~~y 123 (387)
+||+++|
T Consensus 68 ~yL~~~~ 74 (75)
T cd03080 68 DHLEEKY 74 (75)
T ss_pred HHHHHHc
Confidence 9999876
No 139
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=95.86 E-value=0.0087 Score=50.09 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=34.1
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+...++.||.+|.++.|++|+.+|+|||.++..+...
T Consensus 36 ~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~ 76 (121)
T cd03209 36 YLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQH 76 (121)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHH
Confidence 34456788999999999889999999999999998766443
No 140
>KOG0406|consensus
Probab=95.86 E-value=0.014 Score=54.93 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=80.8
Q ss_pred eecc-CCCCcc---ccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhcccceee--h------------
Q psy4819 279 TITN-SNDIKP---LKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHILH--A------------ 338 (387)
Q Consensus 279 k~k~-Pl~~lP---~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~~--~------------ 338 (387)
.++| |.+++| =.|=.+-|+--+ |+-+.-+. ..++|++|+.+++.-.-|++|-++-... .
T Consensus 50 l~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~-~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~ 128 (231)
T KOG0406|consen 50 LEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPS-GPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQE 128 (231)
T ss_pred HHhccccccCCEEEECCceehhhHHHHHHHHhhccC-CCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHH
Confidence 4567 888999 334448888855 99998665 4799999999999999999998854321 1
Q ss_pred hhhhHHHHHHHHHhhhhh-ccceeeeccchhhHHHHHHhHhhhhee
Q psy4819 339 SVSQVTSHVLNELNQVFS-KQSFLVADRFTLADVFMYYSLISVFCT 383 (387)
Q Consensus 339 ~~~n~~~~~lqrLd~~L~-k~tFlVg~~lTlADI~v~~~l~~~~~~ 383 (387)
.....+...|..||+.|. +.+|.-|+.+++.||+++..+.+.+..
T Consensus 129 ~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~ 174 (231)
T KOG0406|consen 129 AAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAV 174 (231)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHH
Confidence 123336778899999999 889999999999999999777766543
No 141
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=95.86 E-value=0.0022 Score=50.44 Aligned_cols=66 Identities=12% Similarity=0.189 Sum_probs=41.0
Q ss_pred ceeecccc-cc---eeeeeeecCCCceeEEEEEEeecCCCC---Ccceeeec-----cCCCCccccccchHHHH---HHH
Q psy4819 53 DLRVLQGS-CE---QILFEKQSGGGGNFQISCRILDLDNQD---PVQYSTIT-----NSNDIKPLKTENLYLWK---LFQ 117 (387)
Q Consensus 53 ~Ly~~pGa-cs---~i~lee~~~~G~~~~~~~~~vd~~~~~---~~~yl~in-----p~~~v~pl~~e~~~l~~---il~ 117 (387)
+|||.+.+ |+ .++|++ .|.+|+. +.+|+.... +.+|...+ |.+.||.+.+++..+++ |+.
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~---~gi~~e~--~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~ 76 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEY---TGEKYEE--KRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILR 76 (82)
T ss_pred EEEEeCCccccHHHHHHHHH---cCCCcEE--EEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHH
Confidence 57777633 33 377887 4899954 668875422 34454332 66677776555555554 789
Q ss_pred Hhhhcc
Q psy4819 118 AISSAN 123 (387)
Q Consensus 118 YLa~~y 123 (387)
||+++|
T Consensus 77 YLa~~~ 82 (82)
T cd03075 77 YIARKH 82 (82)
T ss_pred HHhhcC
Confidence 998764
No 142
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=95.85 E-value=0.015 Score=49.20 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHHhhhhhc-cceeeeccchhhHHHHHHhH
Q psy4819 340 VSQVTSHVLNELNQVFSK-QSFLVADRFTLADVFMYYSL 377 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k-~tFlVg~~lTlADI~v~~~l 377 (387)
..+.+...|..||.+|.+ ..|++|+++|+|||.++..+
T Consensus 31 ~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l 69 (121)
T cd03201 31 TEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKL 69 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHH
Confidence 445578888999999984 78999999999999998754
No 143
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=95.82 E-value=0.0028 Score=49.68 Aligned_cols=56 Identities=7% Similarity=0.077 Sum_probs=37.3
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCC-cceeeeccCCCCcccccc-chHHHH---HHHHhhhccc
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDP-VQYSTITNSNDIKPLKTE-NLYLWK---LFQAISSANV 124 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~-~~yl~inp~~~v~pl~~e-~~~l~~---il~YLa~~y~ 124 (387)
++|.+ .|.+|+. +.+++.+..+ ..++.+||.+.+|.+.++ +..+++ |++||+++||
T Consensus 24 ~~L~~---~~i~~~~--~~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 24 LALNH---KGLEYKT--VPVEFPDIPPILGELTSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred HHHHh---CCCCCeE--EEecCCCcccccccccCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 77887 4899954 5577654322 222378888888887665 444443 7899998875
No 144
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=95.79 E-value=0.0017 Score=49.35 Aligned_cols=64 Identities=13% Similarity=0.178 Sum_probs=41.8
Q ss_pred cceeecccc-cce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccc-cchHHHH---HHHHh
Q psy4819 52 LDLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKT-ENLYLWK---LFQAI 119 (387)
Q Consensus 52 ~~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~-e~~~l~~---il~YL 119 (387)
|+||..+++ ++. ++|+++ +.|.+|+. ..+|.. +.+++|+.+||.+.+|.+.+ ++..+++ |++||
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~-~~~i~~~~--~~~~~~-~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yL 72 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHET-GLGDDVEL--VLVNPW-SDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYL 72 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHh-CCCCCcEE--EEcCcc-cCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhh
Confidence 689999988 442 778772 23788844 446643 45567889998888877653 4444343 56676
No 145
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=95.78 E-value=0.0097 Score=50.40 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=36.3
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 339 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 339 ~~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.....+...|+.||+.|.+..|++|+++|+||+.+++.+...
T Consensus 58 ~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~ 99 (124)
T cd03202 58 AALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWA 99 (124)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHH
Confidence 355567899999999999999999999999999998877544
No 146
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=95.73 E-value=0.012 Score=47.50 Aligned_cols=40 Identities=23% Similarity=0.464 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHHhhhhhc--cceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFSK--QSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k--~tFlVg~~lTlADI~v~~~l~~ 379 (387)
..+.+...++.||+.|.. ..|++|+++|+|||.++..+..
T Consensus 40 ~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~ 81 (104)
T cd03192 40 LKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDY 81 (104)
T ss_pred HHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHH
Confidence 344578888999999987 7899999999999999877644
No 147
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=95.71 E-value=0.012 Score=50.78 Aligned_cols=38 Identities=21% Similarity=0.455 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhhhh--ccceeeeccchhhHHHHHHhHhhh
Q psy4819 343 VTSHVLNELNQVFS--KQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 343 ~~~~~lqrLd~~L~--k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.+...|+.||+.|. +..|++|+.+|+|||.++..+...
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~ 82 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMV 82 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHH
Confidence 45789999999998 678999999999999998776543
No 148
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=95.70 E-value=0.0021 Score=48.68 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=41.1
Q ss_pred ceeecccc-cce---eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccccc-chHHHH---HHHHh
Q psy4819 53 DLRVLQGS-CEQ---ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTE-NLYLWK---LFQAI 119 (387)
Q Consensus 53 ~Ly~~pGa-cs~---i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e-~~~l~~---il~YL 119 (387)
+||..+.+ ++. ++|+++ |.+|+. ..+|+.. .+.+|+++||.|+||.+.++ +..+++ |++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~---gl~~e~--~~v~~~~-~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLA---GITVEL--REVELKN-KPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHc---CCCcEE--EEeCCCC-CCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 57766633 443 788884 899954 5577754 45688899999888888664 555444 55654
No 149
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=95.61 E-value=0.0018 Score=49.61 Aligned_cols=59 Identities=12% Similarity=0.255 Sum_probs=40.7
Q ss_pred cccccce---eeeeeecCCCceeEEEEEEeecCC-CCCcceeeeccCCCCccccccchHHHH---HHHHhh
Q psy4819 57 LQGSCEQ---ILFEKQSGGGGNFQISCRILDLDN-QDPVQYSTITNSNDIKPLKTENLYLWK---LFQAIS 120 (387)
Q Consensus 57 ~pGacs~---i~lee~~~~G~~~~~~~~~vd~~~-~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa 120 (387)
.+++||+ ++|++ .|++|+. ..+++.. +..++|..+||.+.+|.+.+++..+++ |++||+
T Consensus 8 ~~s~~s~~v~~~L~~---~gl~~e~--~~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 8 NYSSWSLRPWLLLKA---AGIPFEE--ILVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCHHHHHHHHHHHH---cCCCCEE--EEeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 3466774 88888 4899954 5577754 345788899999999887655444443 677774
No 150
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=95.57 E-value=0.0029 Score=47.75 Aligned_cols=63 Identities=11% Similarity=0.231 Sum_probs=39.4
Q ss_pred cceeecccc--cc--eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccccc-chHHHH---HHHHhhh
Q psy4819 52 LDLRVLQGS--CE--QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTE-NLYLWK---LFQAISS 121 (387)
Q Consensus 52 ~~Ly~~pGa--cs--~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e-~~~l~~---il~YLa~ 121 (387)
|+||..+++ |. .++|.++ |.+|+. ..++... +.....+||.+.+|.+.++ +..+++ |++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~---gl~~~~--~~~~~~~--~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLK---NIPVEQ--IILQNDD--EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHc---CCCeEE--EECCCCc--hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 689988866 33 2888874 899954 3455432 2233567888877776544 444443 6788763
No 151
>KOG4244|consensus
Probab=95.55 E-value=0.0051 Score=58.49 Aligned_cols=63 Identities=14% Similarity=0.309 Sum_probs=50.1
Q ss_pred hHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHH---H-hhhcchhhhhhHhhhhhhccC
Q psy4819 158 QVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFK---E-LTLQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 158 ~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~---~-l~~~~~~~~P~L~rw~~rv~~ 220 (387)
+-+.+-|+.+++.|++++||.||++|-+|+.++..+..++- . +..-.-.+||||..|.+||++
T Consensus 206 ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 206 ELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 34577789999999999999999999999999998876532 1 222233589999999999975
No 152
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=95.48 E-value=0.016 Score=48.96 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=31.0
Q ss_pred hHHHHHHHHHhhhhhc---cceeeeccchhhHHHHHHhHh
Q psy4819 342 QVTSHVLNELNQVFSK---QSFLVADRFTLADVFMYYSLI 378 (387)
Q Consensus 342 n~~~~~lqrLd~~L~k---~tFlVg~~lTlADI~v~~~l~ 378 (387)
..+...|..||++|.+ ..|++|+++|+|||.++..+.
T Consensus 38 ~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~ 77 (126)
T cd03210 38 KDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLD 77 (126)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHH
Confidence 3467889999999985 489999999999999986653
No 153
>KOG3028|consensus
Probab=95.43 E-value=0.045 Score=53.31 Aligned_cols=64 Identities=20% Similarity=0.377 Sum_probs=50.2
Q ss_pred hHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHH-hhhc----chhhhhhHhhhhhhccCC
Q psy4819 158 QVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKE-LTLQ----SKEKHQHVSRWFNHVQSL 221 (387)
Q Consensus 158 ~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~-l~~~----~~~~~P~L~rw~~rv~~r 221 (387)
....+++..|.+.|++++|+.||+.|--|..++..+..++.. +... -+..++||.|+.+++...
T Consensus 166 ~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 166 KDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 344678888999999999999999999999999999875543 2211 123489999999998764
No 154
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=95.35 E-value=0.02 Score=48.05 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHHhhhhhc--cceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFSK--QSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k--~tFlVg~~lTlADI~v~~~l~~ 379 (387)
....+...|+.||+.|.+ ..|++|+.+|+|||.+++.+..
T Consensus 33 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~ 74 (124)
T cd03184 33 KKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFER 74 (124)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHH
Confidence 445677889999999985 7899999999999998766543
No 155
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=95.34 E-value=0.022 Score=47.31 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHhhhhh-ccceeeeccchhhHHHHHHhHhhh
Q psy4819 341 SQVTSHVLNELNQVFS-KQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~-k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
...+.+.+..+|.+|. ++.|++| .+|+|||.++..+...
T Consensus 44 ~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~ 83 (114)
T cd03195 44 QAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRL 83 (114)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHH
Confidence 4446888899998885 5589999 5999999998777654
No 156
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=95.13 E-value=0.023 Score=47.53 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHHhhhhh-ccceeeeccchhhHHHHHHhHhh
Q psy4819 340 VSQVTSHVLNELNQVFS-KQSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~-k~tFlVg~~lTlADI~v~~~l~~ 379 (387)
....+.+.+..||.+|. +..|++|+++|+|||.++..+..
T Consensus 46 ~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~ 86 (126)
T cd03183 46 AEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQ 86 (126)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHH
Confidence 34457888999998754 46899999999999998876543
No 157
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=94.29 E-value=0.049 Score=45.35 Aligned_cols=39 Identities=18% Similarity=0.300 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhhhh---hccceeeeccchhhHHHHHHhHhhh
Q psy4819 341 SQVTSHVLNELNQVF---SKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L---~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.+.+.+++..+|..| .++.|++|+ +|+|||.++..+...
T Consensus 43 ~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~ 84 (114)
T cd03194 43 QADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRF 84 (114)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHH
Confidence 334556666666555 367899999 999999998776543
No 158
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=94.13 E-value=0.059 Score=43.23 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=32.6
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+...|..||.+|.++.| +++|+|||.+++.+..+
T Consensus 38 ~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~ 75 (98)
T cd03205 38 QRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYL 75 (98)
T ss_pred HHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHH
Confidence 556688999999999999899 99999999998877544
No 159
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=94.03 E-value=0.0051 Score=46.68 Aligned_cols=53 Identities=15% Similarity=0.368 Sum_probs=35.4
Q ss_pred eeeeeecCCCceeEEEEEEeec--CC-CCCcceeeeccCCCCccccc-cchHHHH---HHHHhhh
Q psy4819 64 ILFEKQSGGGGNFQISCRILDL--DN-QDPVQYSTITNSNDIKPLKT-ENLYLWK---LFQAISS 121 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~--~~-~~~~~yl~inp~~~v~pl~~-e~~~l~~---il~YLa~ 121 (387)
|+|++. |++|+... ++. .+ +.+..|.++||.++||.+.+ ++..+++ |++||++
T Consensus 10 i~l~~~---gl~~~~~~--v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 10 IALEEK---GLPYEIKV--VPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp HHHHHH---TGTCEEEE--EETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred HHHHHh---CCCCEEEE--EeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 778884 89996544 544 22 45578999999999988765 3333332 7888875
No 160
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=93.49 E-value=0.0089 Score=45.77 Aligned_cols=63 Identities=10% Similarity=0.218 Sum_probs=39.2
Q ss_pred cceeecccc--cc--eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCcccccc----chHHHH---HHHHhh
Q psy4819 52 LDLRVLQGS--CE--QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTE----NLYLWK---LFQAIS 120 (387)
Q Consensus 52 ~~Ly~~pGa--cs--~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e----~~~l~~---il~YLa 120 (387)
|+||..+++ |. .++|+++ |.+|+. ..+|+... .+ +..||.+.+|.+..+ +..+|+ |++||+
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~---gi~y~~--~~~~~~~~--~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~ 73 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYH---GIPYEV--VEVNPVSR--KE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLK 73 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHC---CCceEE--EECCchhH--HH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHH
Confidence 789998876 33 2788874 899954 33444221 12 355777777776533 444554 788888
Q ss_pred hc
Q psy4819 121 SA 122 (387)
Q Consensus 121 ~~ 122 (387)
++
T Consensus 74 ~~ 75 (77)
T cd03040 74 TY 75 (77)
T ss_pred HH
Confidence 65
No 161
>KOG2903|consensus
Probab=93.06 E-value=0.043 Score=52.16 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=34.0
Q ss_pred hhhHHHHHHHHHhhhhhccc--eeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQS--FLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~t--FlVg~~lTlADI~v~~~l~~~ 380 (387)
..+.+=..|+++|..|.++- |++|+++|.|||=+|..+.+.
T Consensus 204 ~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRF 246 (319)
T KOG2903|consen 204 EVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRF 246 (319)
T ss_pred HHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEee
Confidence 45556677899999999888 999999999999887766543
No 162
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=93.01 E-value=0.1 Score=44.38 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=36.3
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
....+...|+.|+..|.+..|+.|++.|.||+.||+.|..+.
T Consensus 58 ~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~ 99 (126)
T cd03211 58 VIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTIL 99 (126)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 344567888999999999999999999999999998887665
No 163
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=93.01 E-value=0.1 Score=45.17 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=36.2
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhhe
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFC 382 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~~ 382 (387)
........++.|++.|.++.|+.|+++|++|+.+++.++..+.
T Consensus 65 ~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~ 107 (137)
T cd03212 65 IYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLK 107 (137)
T ss_pred HHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHh
Confidence 3344677889999999999999999999999999988876653
No 164
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=92.94 E-value=0.085 Score=46.46 Aligned_cols=25 Identities=32% Similarity=0.357 Sum_probs=21.5
Q ss_pred hccceeeeccchhhHHHHHHhHhhh
Q psy4819 356 SKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 356 ~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
.++.|+.|+.+|||||++++.|.+.
T Consensus 97 ~~~~FlaGd~ptIADisvyg~l~s~ 121 (149)
T cd03197 97 KDRQFHGGSKPNLADLAVYGVLRSV 121 (149)
T ss_pred CCCCccCCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999988654
No 165
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=92.35 E-value=0.032 Score=40.43 Aligned_cols=63 Identities=17% Similarity=0.328 Sum_probs=38.7
Q ss_pred cceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHH---HHHHHh
Q psy4819 52 LDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLW---KLFQAI 119 (387)
Q Consensus 52 ~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~---~il~YL 119 (387)
|+||+.+++ |.. ++|++ .|.+|+. ..++.......++..++|.+.+|.+..++..+. .|++||
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~---~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl 70 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEE---KGLPYEL--VPVDLGEGEQEEFLALNPLGKVPVLEDGGLVLTESLAILEYL 70 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHH---cCCCcEE--EEeCCCCCCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHh
Confidence 579999984 332 66776 3889954 446654433324677888888887655543322 256665
No 166
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=92.06 E-value=0.11 Score=44.83 Aligned_cols=65 Identities=12% Similarity=0.225 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhh-hhHhhhhhhccCCCcc
Q psy4819 155 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKH-QHVSRWFNHVQSLPEV 224 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~-P~L~rw~~rv~~rP~~ 224 (387)
....+++..|..||..+......-| ++|+-||.+|+.|+.+...-+. .| |+|.+|+++|+++-.|
T Consensus 59 ~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi----~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGI----QWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS-------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCC----cCCHHHHHHHHHHHHHcCC
Confidence 4567778888888888775555555 9999999999999765432122 23 6899999999875544
No 167
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=91.77 E-value=0.18 Score=48.55 Aligned_cols=41 Identities=24% Similarity=0.481 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
+...+=..|++||..|.++-|++|+++|-|||-+|..|.+.
T Consensus 206 a~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRF 246 (324)
T COG0435 206 AVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRF 246 (324)
T ss_pred HHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEee
Confidence 44455667789999999999999999999999999988764
No 168
>KOG3029|consensus
Probab=91.61 E-value=0.19 Score=48.40 Aligned_cols=61 Identities=13% Similarity=0.252 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhh-hccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccC
Q psy4819 160 TSHVLNELNQVF-SKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQS 220 (387)
Q Consensus 160 l~~~L~~Le~~L-~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~ 220 (387)
+.+..+..-..| .+++||.|++.++||++++..++.....-...+.-+..+|..||-+|.+
T Consensus 293 lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 293 LYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHHHHHH
Confidence 333343333445 4678999999999999999999876543111222255789999999875
No 169
>KOG1422|consensus
Probab=90.25 E-value=0.75 Score=42.59 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=30.7
Q ss_pred HHHHHHHHhhhhhc---cceeeeccchhhHHHHHHhHhh
Q psy4819 344 TSHVLNELNQVFSK---QSFLVADRFTLADVFMYYSLIS 379 (387)
Q Consensus 344 ~~~~lqrLd~~L~k---~tFlVg~~lTlADI~v~~~l~~ 379 (387)
+-..|.+||.||+. +-|+.|+++|+||..+..-||.
T Consensus 128 Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~ 166 (221)
T KOG1422|consen 128 LLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHH 166 (221)
T ss_pred HHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHH
Confidence 44556999999996 7799999999999999877765
No 170
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=90.05 E-value=0.39 Score=41.23 Aligned_cols=65 Identities=15% Similarity=0.254 Sum_probs=46.2
Q ss_pred hhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhh-hhHhhhhhhccCCCcc
Q psy4819 155 SVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKH-QHVSRWFNHVQSLPEV 224 (387)
Q Consensus 155 ~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~-P~L~rw~~rv~~rP~~ 224 (387)
....+++..|..++..+..... ++..+|+-||.+|+.|+.+...-+. .| |+|.+|+++|++.-+|
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vkgi----~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVKGL----VFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhcCC----CCCHHHHHHHHHHHHHhCC
Confidence 3456677788888877744334 4568999999999999865432122 33 6899999999876554
No 171
>KOG1668|consensus
Probab=89.65 E-value=0.091 Score=49.15 Aligned_cols=59 Identities=17% Similarity=0.382 Sum_probs=46.4
Q ss_pred HHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhhhHhhhhhhccCCCccc
Q psy4819 161 SHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQHVSRWFNHVQSLPEVR 225 (387)
Q Consensus 161 ~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P~L~rw~~rv~~rP~~k 225 (387)
...++.++.+|.+++|.-|...+-+|+.++..+.- ......++|..+|++++.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~------ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV------EPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc------CcchhhhhHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999877632 122357889999998887655443
No 172
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=89.39 E-value=0.14 Score=38.50 Aligned_cols=45 Identities=7% Similarity=0.077 Sum_probs=27.8
Q ss_pred eeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHH---HHHHHhhh
Q psy4819 64 ILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLW---KLFQAISS 121 (387)
Q Consensus 64 i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~---~il~YLa~ 121 (387)
++|.+ .|.+|+. ..++... +||.|++|.+.+++..++ .|++||++
T Consensus 24 ~~L~~---~~i~~~~--~~~~~~~--------~~p~g~vP~l~~~g~~l~es~~I~~yL~~ 71 (72)
T cd03054 24 TYLRM---AGIPYEV--VFSSNPW--------RSPTGKLPFLELNGEKIADSEKIIEYLKK 71 (72)
T ss_pred HHHHh---CCCceEE--EecCCcc--------cCCCcccCEEEECCEEEcCHHHHHHHHhh
Confidence 67776 4899954 3344421 677777777655544333 26788865
No 173
>KOG4420|consensus
Probab=88.93 E-value=0.44 Score=45.50 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhhhhhc----cceeeeccchhhHHHHHHhHhhhh
Q psy4819 342 QVTSHVLNELNQVFSK----QSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 342 n~~~~~lqrLd~~L~k----~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
..+..+|..+|+.|.+ -+||+|+.+|+|||.+...||+..
T Consensus 208 d~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~ 251 (325)
T KOG4420|consen 208 DELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLK 251 (325)
T ss_pred HHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHH
Confidence 3457778888888888 689999999999999999999864
No 174
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=87.32 E-value=0.2 Score=38.86 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=30.5
Q ss_pred ecccccc---eeeeeeecCCCceeEEEEEEeecCCCCCcceeeeccCCCCccccccchHHHH---HHHHhhh
Q psy4819 56 VLQGSCE---QILFEKQSGGGGNFQISCRILDLDNQDPVQYSTITNSNDIKPLKTENLYLWK---LFQAISS 121 (387)
Q Consensus 56 ~~pGacs---~i~lee~~~~G~~~~~~~~~vd~~~~~~~~yl~inp~~~v~pl~~e~~~l~~---il~YLa~ 121 (387)
+..|+|+ +++|++ .|+||+. +++.+. . ..+|.|+||.+.+++..+.+ |+.||++
T Consensus 14 ~~~~~~~~kv~~~L~e---lglpye~----~~~~~~---~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 14 LPDNASCLAVQTFLKM---CNLPFNV----RCRANA---E--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred cCCCCCHHHHHHHHHH---cCCCcEE----EecCCc---c--ccCCCCcccEEEECCEEEeCHHHHHHHHhc
Confidence 3456665 388998 4999954 343221 1 13566777765433322221 6788875
No 175
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=86.82 E-value=0.85 Score=41.27 Aligned_cols=110 Identities=12% Similarity=0.186 Sum_probs=67.6
Q ss_pred ccchHHHH---HHHHhhhccccccccccccchhhHHHHHHHhhccccee-------------------------------
Q psy4819 107 TENLYLWK---LFQAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHIL------------------------------- 152 (387)
Q Consensus 107 ~e~~~l~~---il~YLa~~y~~~~~L~g~~~~erA~v~~Wl~f~~s~l~------------------------------- 152 (387)
+++.++-| |.+|+.+.+.+ .|+ +..-+-.+..|+.-+.+...
T Consensus 54 edg~~m~ESlDIV~y~d~~~~~--~~l--t~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s 129 (215)
T COG2999 54 EDGRAMPESLDIVHYVDELDGK--PLL--TGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEAS 129 (215)
T ss_pred cccccchhhhHHHHHHHHhcCc--hhh--ccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhc
Confidence 44555443 67899887653 333 23345667788876554322
Q ss_pred -e---------hhhhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHHHHHHHHHhhhcchhhhh-hHhhhhhhccCC
Q psy4819 153 -H---------ASVSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFKELTLQSKEKHQ-HVSRWFNHVQSL 221 (387)
Q Consensus 153 -g---------~~a~~~l~~~L~~Le~~L~~~~yLvGd~~TlADi~l~~~l~~~~~~l~~~~~~~~P-~L~rw~~rv~~r 221 (387)
| .....++...++.++..+.+.+=+ ...+|.-||.+|+.++.+...-+. .+| .+..|..+|++.
T Consensus 130 ~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~-n~~l~~ddi~vFplLRnlt~v~gi----~wps~v~dy~~~msek 204 (215)
T COG2999 130 EGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAV-NGELSEDDILVFPLLRNLTLVAGI----QWPSRVADYRDNMSEK 204 (215)
T ss_pred cccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchh-ccccchhhhhhhHHhccceecccC----CCcHHHHHHHHHHHHh
Confidence 1 223455666677777666554423 346899999999998765432222 344 699999999876
Q ss_pred Cccc
Q psy4819 222 PEVR 225 (387)
Q Consensus 222 P~~k 225 (387)
-.+.
T Consensus 205 tqV~ 208 (215)
T COG2999 205 TQVN 208 (215)
T ss_pred hCcc
Confidence 6554
No 176
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=56.42 E-value=12 Score=33.62 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=31.8
Q ss_pred HHHHHHHHhhhhhcc---ceeeecc-chhhHHHHHHHHHHH
Q psy4819 160 TSHVLNELNQVFSKQ---SFLVADR-FTLADVFMYYSLISV 196 (387)
Q Consensus 160 l~~~L~~Le~~L~~~---~yLvGd~-~TlADi~l~~~l~~~ 196 (387)
-.+++..|++.|+.. .|+.|+. .|-.|+.++..+.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 456888999999988 8999988 999999999988654
No 177
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=56.15 E-value=9.9 Score=32.81 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=28.0
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
....++..|+.||..+... -.++..+|+.||.+|+.|.+..
T Consensus 60 ~i~~l~~~L~~Le~ll~~~-~~~n~~LS~dDi~lFp~LR~Lt 100 (132)
T PF04399_consen 60 LIAELNADLEELEPLLASP-NAVNGELSIDDIILFPILRSLT 100 (132)
T ss_dssp HHHHHHHHHHHHHHH-SCT-TBTTSS--HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccc-cccCCCCCHHHHHHHHHHhhhh
Confidence 4455788888898766644 4444599999999999988653
No 178
>KOG4244|consensus
Probab=53.90 E-value=6.6 Score=37.76 Aligned_cols=41 Identities=22% Similarity=0.428 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
.+.+++=|+.++..|...-|+-|+.+|-+|.+||+.|..++
T Consensus 205 ~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~ 245 (281)
T KOG4244|consen 205 DELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVY 245 (281)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhhee
Confidence 34567788999999999999999999999999999998775
No 179
>KOG3027|consensus
Probab=51.89 E-value=36 Score=31.76 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=38.0
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhhee
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFCT 383 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~~~ 383 (387)
....+...++.|...|....|+.|++.|-+|-.||+.+..++.+
T Consensus 178 Vie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt 221 (257)
T KOG3027|consen 178 VIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTT 221 (257)
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhh
Confidence 44557778899999999999999999999999999998877654
No 180
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=51.62 E-value=26 Score=30.08 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhh
Q psy4819 340 VSQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVF 381 (387)
Q Consensus 340 ~~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~ 381 (387)
....++..|+.||.-+..-. .+++.+|+.||.+|+.|.+..
T Consensus 61 ~i~~l~~~L~~l~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt 101 (128)
T cd03199 61 YIAALNALLEELDPLILSSE-AVNGQLSTDDIILFPILRNLT 101 (128)
T ss_pred HHHHHHHHHHHHHHHHcCcc-ccCCcCCHHHHHHHHHHhhhh
Confidence 44556777888886654444 367789999999999987654
No 181
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=49.83 E-value=5.4 Score=30.34 Aligned_cols=29 Identities=10% Similarity=-0.237 Sum_probs=23.9
Q ss_pred eeeeeccCC-CCcc----ccccchHHHHHH--HHhh
Q psy4819 276 QYSTITNSN-DIKP----LKTENLYLWKLF--QAIS 304 (387)
Q Consensus 276 ~~~k~k~Pl-~~lP----~~~f~l~e~k~~--Y~n~ 304 (387)
++-++.||+ +++| .+|+.|.|+.+| |++.
T Consensus 41 ~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 41 PEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp HHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred hhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 456788999 9999 448999999988 8763
No 182
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=33.15 E-value=9.4 Score=29.23 Aligned_cols=54 Identities=17% Similarity=0.314 Sum_probs=31.0
Q ss_pred Cccccceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCCCC-cceeeeccCCCCcccccc
Q psy4819 48 TPEFLDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQDP-VQYSTITNSNDIKPLKTE 108 (387)
Q Consensus 48 ~~~~~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~~~-~~yl~inp~~~v~pl~~e 108 (387)
..+.++||..||- |.. -.|++ .|.+|+. +|++.... .....++....+|.+..+
T Consensus 6 ~~~~V~ly~~~~Cp~C~~ak~~L~~---~gi~y~~----idi~~~~~~~~~~~~~g~~~vP~i~i~ 64 (79)
T TIGR02190 6 KPESVVVFTKPGCPFCAKAKATLKE---KGYDFEE----IPLGNDARGRSLRAVTGATTVPQVFIG 64 (79)
T ss_pred CCCCEEEEECCCCHhHHHHHHHHHH---cCCCcEE----EECCCChHHHHHHHHHCCCCcCeEEEC
Confidence 4456899999976 553 45555 3788843 67754322 233344555666665433
No 183
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=31.74 E-value=7.1 Score=28.30 Aligned_cols=50 Identities=10% Similarity=0.261 Sum_probs=29.9
Q ss_pred cceeecccc--cce--eeeeeecCCCceeEEEEEEeecCC--CCCcceeeeccCCCCcccccc
Q psy4819 52 LDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDN--QDPVQYSTITNSNDIKPLKTE 108 (387)
Q Consensus 52 ~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~--~~~~~yl~inp~~~v~pl~~e 108 (387)
+++|..++. |-. .+|++ .|.+|. .+|++. +...++..+|+.+++|.+..+
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~---~~i~~~----~~~i~~~~~~~~~~~~~~~~~~vP~i~~~ 57 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDE---RGIPFE----EVDVDEDPEALEELKKLNGYRSVPVVVIG 57 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHH---CCCCeE----EEeCCCCHHHHHHHHHHcCCcccCEEEEC
Confidence 678888864 332 55666 367773 366654 222356667777777766544
No 184
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=30.63 E-value=1.3e+02 Score=27.57 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHhhhhhccceeeeccchhhHHHHHHhHhhhhe
Q psy4819 341 SQVTSHVLNELNQVFSKQSFLVADRFTLADVFMYYSLISVFC 382 (387)
Q Consensus 341 ~n~~~~~lqrLd~~L~k~tFlVg~~lTlADI~v~~~l~~~~~ 382 (387)
...++.-++.|++.+.+.+ .+.+.+++-||.||..|...++
T Consensus 144 ~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~ 184 (215)
T COG2999 144 LKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTL 184 (215)
T ss_pred HHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhcccee
Confidence 3446777788887766777 8889999999999998876653
No 185
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=30.00 E-value=62 Score=28.96 Aligned_cols=38 Identities=13% Similarity=0.259 Sum_probs=32.4
Q ss_pred HHHHHHHHhhhhhcc---ceeeecc-chhhHHHHHHhHhhhh
Q psy4819 344 TSHVLNELNQVFSKQ---SFLVADR-FTLADVFMYYSLISVF 381 (387)
Q Consensus 344 ~~~~lqrLd~~L~k~---tFlVg~~-lTlADI~v~~~l~~~~ 381 (387)
..+++..|+..|..+ .|+-|+. .|=.|+.+++.|...+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 367888888888888 8888887 9999999999998754
No 186
>PRK10638 glutaredoxin 3; Provisional
Probab=24.66 E-value=11 Score=29.03 Aligned_cols=50 Identities=12% Similarity=0.295 Sum_probs=31.3
Q ss_pred cceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCC--CCcceeeeccCCCCcccccc
Q psy4819 52 LDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQ--DPVQYSTITNSNDIKPLKTE 108 (387)
Q Consensus 52 ~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~--~~~~yl~inp~~~v~pl~~e 108 (387)
++||..++. |.. ..|++ .|.+|+. +|++.. ...++..+++.+.+|.+..+
T Consensus 4 v~ly~~~~Cp~C~~a~~~L~~---~gi~y~~----~dv~~~~~~~~~l~~~~g~~~vP~i~~~ 59 (83)
T PRK10638 4 VEIYTKATCPFCHRAKALLNS---KGVSFQE----IPIDGDAAKREEMIKRSGRTTVPQIFID 59 (83)
T ss_pred EEEEECCCChhHHHHHHHHHH---cCCCcEE----EECCCCHHHHHHHHHHhCCCCcCEEEEC
Confidence 678887765 442 66776 3888843 566442 23356667777777776444
No 187
>KOG3029|consensus
Probab=24.42 E-value=39 Score=32.98 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=22.6
Q ss_pred hccceeeeccchhhHHHHHHhHhhh
Q psy4819 356 SKQSFLVADRFTLADVFMYYSLISV 380 (387)
Q Consensus 356 ~k~tFlVg~~lTlADI~v~~~l~~~ 380 (387)
+.|.|+-|...+|||++||++|.+.
T Consensus 306 knr~flGG~kPnLaDLsvfGvl~sm 330 (370)
T KOG3029|consen 306 KNRPFLGGKKPNLADLSVFGVLRSM 330 (370)
T ss_pred CCCCccCCCCCchhhhhhhhhhhHh
Confidence 5778999999999999999999764
No 188
>PRK10329 glutaredoxin-like protein; Provisional
Probab=23.68 E-value=20 Score=27.89 Aligned_cols=52 Identities=10% Similarity=0.188 Sum_probs=30.7
Q ss_pred cccceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCCCC-cceeeeccCCCCcccccc
Q psy4819 50 EFLDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQDP-VQYSTITNSNDIKPLKTE 108 (387)
Q Consensus 50 ~~~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~~~-~~yl~inp~~~v~pl~~e 108 (387)
|.++||..++- |.. ..|++ .|.+|+ .+|++.... .+.+..++...+|.+..+
T Consensus 1 ~~v~lYt~~~Cp~C~~ak~~L~~---~gI~~~----~idi~~~~~~~~~~~~~g~~~vPvv~i~ 57 (81)
T PRK10329 1 MRITIYTRNDCVQCHATKRAMES---RGFDFE----MINVDRVPEAAETLRAQGFRQLPVVIAG 57 (81)
T ss_pred CEEEEEeCCCCHhHHHHHHHHHH---CCCceE----EEECCCCHHHHHHHHHcCCCCcCEEEEC
Confidence 35789988875 553 66776 378884 378865322 233334455566655443
No 189
>KOG0079|consensus
Probab=22.61 E-value=34 Score=30.42 Aligned_cols=19 Identities=21% Similarity=0.672 Sum_probs=15.8
Q ss_pred cccccchhhHhhhhhhccc
Q psy4819 5 LQSKEKHQHVSRWFNHVQS 23 (387)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (387)
|-.-|.|.||+||..+++.
T Consensus 90 VTn~ESF~Nv~rWLeei~~ 108 (198)
T KOG0079|consen 90 VTNGESFNNVKRWLEEIRN 108 (198)
T ss_pred CcchhhhHhHHHHHHHHHh
Confidence 4456889999999999875
No 190
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=22.52 E-value=14 Score=26.64 Aligned_cols=50 Identities=8% Similarity=0.187 Sum_probs=30.1
Q ss_pred ccceeecccc--cce--eeeeeecCCCceeEEEEEEeecCCCCC--cceeeeccCCCCccccc
Q psy4819 51 FLDLRVLQGS--CEQ--ILFEKQSGGGGNFQISCRILDLDNQDP--VQYSTITNSNDIKPLKT 107 (387)
Q Consensus 51 ~~~Ly~~pGa--cs~--i~lee~~~~G~~~~~~~~~vd~~~~~~--~~yl~inp~~~v~pl~~ 107 (387)
|++||+.++. |.. ..|++ .|.+| ..+|.+.... .++..+++..++|.+..
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~---~~i~~----~~vdi~~~~~~~~~~~~~~~~~~vP~~~~ 56 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTS---KGIAF----EEIDVEKDSAAREEVLKVLGQRGVPVIVI 56 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHH---CCCeE----EEEeccCCHHHHHHHHHHhCCCcccEEEE
Confidence 5789998865 543 45665 36666 4477765322 23556666677776544
No 191
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=20.25 E-value=1.8e+02 Score=24.81 Aligned_cols=77 Identities=9% Similarity=0.102 Sum_probs=30.8
Q ss_pred ccccccchHHHHHH--HHhhhccccccccccccchhhHHHHHHHhhccccee--ehhhhhHHHHHHHHHhhhhhccceee
Q psy4819 287 KPLKTENLYLWKLF--QAISSANVKRSDILWSSKEEEFLIKQWIEYTNSHIL--HASVSQVTSHVLNELNQVFSKQSFLV 362 (387)
Q Consensus 287 lP~~~f~l~e~k~~--Y~n~~~~~~~~~llg~~~~~sa~i~qW~~y~~~~~~--~~~~~n~~~~~lqrLd~~L~k~tFlV 362 (387)
..++||.|.|-.+| |+..+-. |+. + .+| .|+-..+. .+...+.....-+..+..|.++.-=.
T Consensus 41 ~~~~gF~L~e~NAIvrYl~nDF~-------~~e---s---~e~-e~a~~~lE~~ly~k~~~~e~v~~~~~k~l~~yl~~~ 106 (122)
T PF09635_consen 41 DKKSGFELFEPNAIVRYLANDFE-------GQE---S---IEY-EFALSSLENVLYHKSNKKEHVESAVNKSLDNYLTSL 106 (122)
T ss_dssp E-S--S----HHHHHHHHTT--T-------TTT---S---HHH-HHHHHHTTTGGGSSS--HHHHHHHHHHHHHHT-S--
T ss_pred ecCCceEEecccHHHHHHHhhcC-------Ccc---h---HHH-HHHHHHHHHHHhcccccHHHHHHHHHHhHHHhhhhh
Confidence 35899999999999 9988721 111 1 122 22221111 11212222333344444455555446
Q ss_pred eccchhhHHHHHHhH
Q psy4819 363 ADRFTLADVFMYYSL 377 (387)
Q Consensus 363 g~~lTlADI~v~~~l 377 (387)
.+.+|-++|.+|..+
T Consensus 107 ~e~lsAt~lIlFAn~ 121 (122)
T PF09635_consen 107 KEPLSATQLILFANV 121 (122)
T ss_dssp -SS--HHHHHHHHHH
T ss_pred cCCCCHHHheeeeec
Confidence 788999999998764
Done!