Query psy4821
Match_columns 520
No_of_seqs 154 out of 1809
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 18:36:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 4.9E-67 1.7E-71 549.1 40.4 407 32-519 4-471 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 1.1E-65 3.8E-70 541.3 38.5 406 34-519 4-474 (494)
3 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.4E-64 4.7E-69 530.2 40.9 405 34-519 6-467 (476)
4 3pm0_A Cypib1, cytochrome P450 100.0 1.8E-64 6.1E-69 533.6 35.5 407 33-518 4-478 (507)
5 1po5_A Cytochrome P450 2B4; ox 100.0 8.8E-64 3E-68 524.4 40.4 403 35-518 7-467 (476)
6 3czh_A Cytochrome P450 2R1; vi 100.0 1.1E-63 3.6E-68 524.4 40.8 405 34-519 8-471 (481)
7 1r9o_A Cytochrome P450 2C9; mo 100.0 1E-63 3.5E-68 524.0 39.2 406 32-518 4-468 (477)
8 2hi4_A Cytochrome P450 1A2; CY 100.0 7.3E-64 2.5E-68 527.6 37.1 401 35-518 11-483 (495)
9 2fdv_A Cytochrome P450 2A6; CY 100.0 2.1E-63 7.1E-68 521.5 39.4 402 36-518 8-467 (476)
10 3qz1_A Steroid 21-hydroxylase; 100.0 7.5E-63 2.6E-67 519.9 29.0 396 32-519 23-479 (496)
11 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.1E-61 3.9E-66 508.8 35.7 374 30-499 16-460 (482)
12 3nxu_A Cytochrome P450 3A4; al 100.0 5.6E-63 1.9E-67 519.3 23.6 404 30-518 6-469 (485)
13 3ld6_A Lanosterol 14-alpha dem 100.0 1.5E-62 5.2E-67 512.9 25.5 384 37-518 10-448 (461)
14 3s79_A Cytochrome P450 19A1; o 100.0 5.4E-61 1.8E-65 506.6 34.8 382 32-516 39-484 (503)
15 3dbg_A Putative cytochrome P45 100.0 1.8E-60 6.2E-65 498.0 24.9 384 37-518 22-456 (467)
16 2cib_A Cytochrome P450 51; hem 100.0 7.5E-59 2.6E-63 484.1 28.9 364 38-496 4-421 (455)
17 2ve3_A Putative cytochrome P45 100.0 4.4E-59 1.5E-63 484.3 26.8 367 30-498 4-420 (444)
18 3n9y_A Cholesterol SIDE-chain 100.0 2.4E-58 8.1E-63 484.4 32.2 385 33-517 4-468 (487)
19 3i3k_A Lanosterol 14-alpha dem 100.0 3.9E-59 1.3E-63 487.1 25.6 374 34-504 7-435 (461)
20 3gw9_A Sterol 14alpha-demethyl 100.0 9.8E-59 3.4E-63 482.2 27.3 380 37-514 2-438 (450)
21 2ij2_A Cytochrome P450 BM3; mo 100.0 3.3E-57 1.1E-61 473.6 28.5 386 38-518 3-446 (470)
22 3mdm_A Cholesterol 24-hydroxyl 100.0 1.7E-55 5.7E-60 458.9 30.7 350 56-499 9-419 (456)
23 3dax_A Cytochrome P450 7A1; ch 100.0 1.4E-55 4.8E-60 463.8 28.6 385 30-514 5-474 (491)
24 3v8d_A Cholesterol 7-alpha-mon 100.0 2E-55 6.9E-60 462.7 29.3 387 30-516 5-476 (491)
25 3b6h_A Prostacyclin synthase; 100.0 1.3E-54 4.6E-59 457.2 32.2 391 29-515 9-479 (498)
26 3b98_A Prostaglandin I2 syntha 100.0 7.8E-55 2.7E-59 456.2 27.1 365 29-498 9-441 (475)
27 1n97_A CYP175A1; electron tran 100.0 5.9E-55 2E-59 445.3 19.5 349 41-518 2-381 (389)
28 2cd8_A Cytochrome P450 monooxy 100.0 1.1E-53 3.7E-58 442.2 29.0 342 32-496 20-402 (436)
29 1ued_A P450 OXYC, P450 monooxy 100.0 2.8E-52 9.6E-57 427.9 29.8 332 36-497 8-385 (406)
30 1izo_A P450bsbeta, cytochrome 100.0 2.9E-51 1E-55 422.0 32.4 345 46-497 8-391 (417)
31 2zbx_A Cytochrome P450-SU1; be 100.0 4E-51 1.4E-55 420.1 30.0 338 36-497 3-384 (412)
32 1jfb_A Nitric-oxide reductase 100.0 5.5E-51 1.9E-55 418.2 30.3 336 39-497 2-382 (404)
33 1cpt_A Cytochrome P450-TERP; o 100.0 4.7E-51 1.6E-55 421.8 27.1 347 35-495 3-404 (428)
34 3awm_A Fatty acid alpha-hydrox 100.0 5E-51 1.7E-55 420.0 27.0 348 40-498 4-390 (415)
35 2jjn_A Cytochrome P450 113A1; 100.0 2.9E-50 1E-54 413.6 28.8 345 24-496 5-381 (411)
36 1s1f_A Putative cytochrome P45 100.0 5E-50 1.7E-54 411.1 27.3 332 38-497 8-382 (406)
37 1odo_A Putative cytochrome P45 100.0 4.3E-49 1.5E-53 404.5 30.8 324 54-497 12-383 (408)
38 2zwu_A Camphor 5-monooxygenase 100.0 9.5E-50 3.2E-54 409.9 25.3 335 34-496 7-386 (415)
39 3aba_A Cytochrome P450; oxidor 100.0 1.1E-49 3.6E-54 408.3 25.3 321 54-497 16-377 (403)
40 2z36_A MOXA, cytochrome P450 t 100.0 1.4E-48 4.9E-53 401.0 33.1 334 36-497 5-385 (413)
41 3a4g_A Vitamin D hydroxylase; 100.0 2.5E-49 8.7E-54 406.3 27.4 321 54-497 17-376 (411)
42 1z8o_A 6-deoxyerythronolide B 100.0 4.7E-49 1.6E-53 403.7 29.3 321 54-497 11-380 (404)
43 3ejb_B Biotin biosynthesis cyt 100.0 9.7E-49 3.3E-53 401.5 31.0 325 54-497 10-373 (404)
44 4fb2_A P450CIN; heme, monooxyg 100.0 7.2E-50 2.5E-54 409.0 21.7 320 54-499 16-372 (398)
45 2y5n_A MYCG, P-450-like protei 100.0 2.8E-49 9.6E-54 406.6 26.0 322 54-497 34-395 (417)
46 3tyw_A Putative cytochrome P45 100.0 9.6E-49 3.3E-53 403.1 29.8 322 54-498 26-390 (417)
47 2z3t_A Cytochrome P450; monoxy 100.0 9.9E-49 3.4E-53 403.7 29.7 325 55-497 18-392 (425)
48 1n40_A P450 MT2, cytochrome P4 100.0 8.4E-49 2.9E-53 400.7 27.7 322 55-497 14-374 (396)
49 3lxh_A Cytochrome P450; heme, 100.0 3.9E-49 1.3E-53 406.5 24.8 198 276-499 197-396 (421)
50 2xkr_A CYP142, putative cytoch 100.0 1.7E-48 5.9E-53 398.8 29.0 319 56-496 17-368 (398)
51 3abb_A CYP105D6, cytochrome P4 100.0 2.8E-49 9.7E-54 405.9 23.3 320 53-497 20-382 (408)
52 1gwi_A CYP154C1, cytochrome P4 100.0 5.6E-49 1.9E-53 403.9 24.9 322 54-497 14-384 (411)
53 3ivy_A Cytochrome P450 CYP125; 100.0 3.8E-49 1.3E-53 407.9 23.6 339 37-497 17-406 (433)
54 3oft_A Cytochrome P450, CYP101 100.0 3.3E-49 1.1E-53 403.9 22.0 196 280-499 179-376 (396)
55 1q5d_A P450 epoxidase; cytochr 100.0 3.9E-48 1.3E-52 398.7 27.9 327 55-497 24-394 (419)
56 3nc3_A Cytochrome P450 CYPX; c 100.0 2.2E-48 7.6E-53 402.8 25.9 333 56-498 52-419 (441)
57 3buj_A CALO2; heme, iron, meta 100.0 4.7E-48 1.6E-52 395.4 27.9 195 276-497 175-371 (397)
58 3tkt_A Cytochrome P450; aromat 100.0 3.2E-48 1.1E-52 402.8 23.4 328 59-495 47-426 (450)
59 2dkk_A Cytochrome P450; CYP158 100.0 4.5E-48 1.5E-52 396.9 24.2 317 56-497 26-385 (411)
60 3oo3_A OXY protein; cytochrome 100.0 1.6E-47 5.6E-52 389.7 28.1 314 55-498 10-362 (384)
61 2wm5_A CYP124, putative cytoch 100.0 1.6E-47 5.6E-52 395.7 28.4 321 57-496 44-414 (435)
62 2xbk_A PIMD protein; epoxidati 100.0 3.9E-47 1.3E-51 388.9 30.2 314 55-497 24-382 (404)
63 1lfk_A OXYB, P450 monooxygenas 100.0 8.7E-48 3E-52 393.5 25.0 194 278-497 181-376 (398)
64 3r9b_A Cytochrome P450 164A2; 100.0 1.7E-47 5.8E-52 394.1 26.4 197 276-497 197-395 (418)
65 2uuq_A CYP130, cytochrome P450 100.0 1.6E-47 5.3E-52 393.4 22.6 319 56-496 24-389 (414)
66 3dsk_A Cytochrome P450 74A, ch 100.0 4.1E-48 1.4E-52 407.4 18.1 161 336-497 279-472 (495)
67 3mgx_A Putative P450 monooxyge 100.0 5.1E-47 1.7E-51 389.4 25.3 317 56-497 36-393 (415)
68 3rwl_A Cytochrome P450 alkane 100.0 1.2E-45 4.3E-50 380.5 30.9 197 277-497 207-405 (426)
69 3dan_A Cytochrome P450 74A2; A 100.0 3.7E-46 1.3E-50 390.1 26.0 163 336-499 261-456 (473)
70 2wiy_A XPLA-heme, cytochrome P 100.0 1.6E-45 5.5E-50 376.0 26.3 323 56-497 19-374 (394)
71 3b4x_A 367AA long hypothetical 100.0 2E-45 6.9E-50 371.7 23.0 184 282-497 162-346 (367)
72 2rfb_A Cytochrome P450; heme, 100.0 3.1E-45 1.1E-49 367.0 24.0 165 308-497 158-324 (343)
73 3p3o_A Cytochrome P450; monoox 100.0 2.6E-44 9E-49 369.7 28.6 198 276-497 195-394 (416)
74 1io7_A Cytochrome P450 CYP119; 100.0 1.3E-44 4.6E-49 365.9 24.7 182 278-496 162-345 (368)
75 4dnj_A Putative cytochrome P45 100.0 8.6E-43 2.9E-47 357.8 22.9 152 336-497 237-390 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 3.2E-40 1.1E-44 338.4 25.6 199 276-499 196-395 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 2.7E-39 9.3E-44 325.2 10.7 147 342-498 214-362 (381)
78 2krb_A Eukaryotic translation 57.0 34 0.0012 24.4 6.7 51 48-98 5-66 (81)
79 3lqv_A PRE-mRNA branch site pr 50.3 51 0.0017 25.3 7.2 58 39-98 3-66 (115)
80 1x4c_A Splicing factor, argini 44.4 99 0.0034 23.4 7.9 50 47-98 18-69 (108)
81 3d2w_A TAR DNA-binding protein 44.3 55 0.0019 24.0 6.1 55 40-96 7-65 (89)
82 2nlw_A Eukaryotic translation 42.6 76 0.0026 23.9 7.0 54 45-98 16-80 (105)
83 2diu_A KIAA0430 protein; struc 42.2 41 0.0014 25.5 4.9 50 48-98 13-65 (96)
84 1s79_A Lupus LA protein; RRM, 38.5 1E+02 0.0035 23.2 7.1 50 47-98 14-71 (103)
85 2cqc_A Arginine/serine-rich sp 37.0 1.2E+02 0.004 22.0 7.3 57 40-98 11-76 (95)
86 3ns6_A Eukaryotic translation 34.6 1E+02 0.0035 22.9 6.5 53 46-98 8-73 (100)
87 2l2t_A Receptor tyrosine-prote 34.4 89 0.003 19.8 4.8 10 24-33 28-37 (44)
88 3beg_B Splicing factor, argini 32.9 85 0.0029 24.2 5.9 49 48-98 20-70 (115)
89 2dgx_A KIAA0430 protein; RRM d 32.2 1.4E+02 0.005 21.7 6.9 52 47-98 12-71 (96)
90 2kxn_B Transformer-2 protein h 31.8 1.8E+02 0.0063 22.8 7.9 54 43-98 45-107 (129)
91 4f25_A Polyadenylate-binding p 30.6 1.2E+02 0.004 23.3 6.3 50 47-98 8-64 (115)
92 1whx_A Hypothetical protein ri 28.9 1.3E+02 0.0046 22.8 6.4 49 48-98 14-65 (111)
93 1nu4_A U1A RNA binding domain; 28.6 1.3E+02 0.0046 21.8 6.2 53 46-98 10-70 (97)
94 1x4e_A RNA binding motif, sing 28.2 1.2E+02 0.004 21.5 5.6 54 43-98 4-66 (85)
95 2cq3_A RNA-binding protein 9; 27.7 1.8E+02 0.0063 21.4 7.9 54 43-98 14-74 (103)
96 2kvi_A Nuclear polyadenylated 27.6 1.4E+02 0.0049 21.7 6.2 50 47-98 13-64 (96)
97 2a3j_A U1 small nuclear ribonu 27.4 1.8E+02 0.0062 22.9 7.0 53 46-98 31-91 (127)
98 4fxv_A ELAV-like protein 1; RN 27.4 1.4E+02 0.0048 22.2 6.1 50 47-98 22-80 (99)
99 2dgu_A Heterogeneous nuclear r 27.3 1.6E+02 0.0056 21.7 6.6 51 46-98 13-64 (103)
100 1iqt_A AUF1, heterogeneous nuc 26.8 1.1E+02 0.0038 20.9 5.2 50 48-99 3-61 (75)
101 2l9u_A Receptor tyrosine-prote 26.3 1.1E+02 0.0036 18.1 4.4 28 6-33 6-33 (40)
102 1whw_A Hypothetical protein ri 26.2 1.8E+02 0.006 21.2 6.5 51 46-98 10-69 (99)
103 2cpf_A RNA binding motif prote 26.0 1.5E+02 0.0052 21.6 6.1 50 47-98 8-69 (98)
104 2cqi_A Nucleolysin TIAR; RNA r 25.8 1.8E+02 0.0062 21.4 6.6 51 46-98 17-74 (103)
105 2jrs_A RNA-binding protein 39; 25.3 2.1E+02 0.0073 21.5 6.9 51 46-98 28-87 (108)
106 2dgv_A HnRNP M, heterogeneous 25.2 1.9E+02 0.0064 20.7 7.2 51 46-98 10-67 (92)
107 3ex7_B RNA-binding protein 8A; 25.2 2E+02 0.0068 22.1 7.0 51 46-98 24-83 (126)
108 2dnz_A Probable RNA-binding pr 25.1 1.9E+02 0.0066 20.7 7.0 51 46-98 7-66 (95)
109 2dhg_A TRNA selenocysteine ass 25.0 2.1E+02 0.0071 21.1 7.5 56 41-98 6-70 (104)
110 2hvz_A Splicing factor, argini 24.9 1.5E+02 0.0052 21.7 5.9 49 48-98 4-56 (101)
111 1x4h_A RNA-binding protein 28; 24.8 2.2E+02 0.0074 21.2 7.9 54 43-98 14-76 (111)
112 2d9p_A Polyadenylate-binding p 24.4 2E+02 0.0067 21.2 6.5 56 41-98 12-74 (103)
113 1sjq_A Polypyrimidine tract-bi 24.4 2.4E+02 0.0081 21.5 7.0 51 45-97 17-70 (105)
114 1x4g_A Nucleolysin TIAR; struc 24.2 2.2E+02 0.0074 21.3 6.8 50 47-98 28-80 (109)
115 3s8s_A Histone-lysine N-methyl 24.1 1.8E+02 0.0063 22.1 6.3 51 46-98 8-67 (110)
116 2e5h_A Zinc finger CCHC-type a 24.0 2E+02 0.0069 20.6 7.5 52 45-98 17-77 (94)
117 2la6_A RNA-binding protein FUS 23.9 2.1E+02 0.0071 20.9 6.5 54 43-98 12-82 (99)
118 3md1_A Nuclear and cytoplasmic 23.4 1.8E+02 0.0063 20.2 5.9 49 48-98 5-62 (83)
119 1x5p_A Negative elongation fac 23.0 2.2E+02 0.0076 20.7 6.8 49 46-98 17-68 (97)
120 2do4_A Squamous cell carcinoma 22.9 2.2E+02 0.0077 20.7 7.3 52 45-98 18-77 (100)
121 2mss_A Protein (musashi1); RNA 22.6 1.7E+02 0.006 19.8 5.5 49 48-98 3-60 (75)
122 2jvr_A Nucleolar protein 3; RN 22.6 1.8E+02 0.0062 22.3 6.0 51 46-98 30-86 (111)
123 3bej_E Nuclear receptor coacti 22.4 83 0.0028 17.0 2.5 22 469-490 1-22 (26)
124 3ulh_A THO complex subunit 4; 22.3 2.3E+02 0.0077 21.0 6.5 51 46-98 31-89 (107)
125 1oo0_B CG8781-PA, drosophila Y 21.9 2.5E+02 0.0085 20.9 7.2 50 47-98 29-87 (110)
126 1x5u_A Splicing factor 3B subu 21.6 2.5E+02 0.0084 20.7 7.2 51 46-98 17-76 (105)
127 2dnq_A RNA-binding protein 4B; 21.4 2.3E+02 0.0077 20.2 7.5 52 45-98 9-61 (90)
128 2dnm_A SRP46 splicing factor; 21.4 2E+02 0.0067 21.2 5.9 51 46-98 15-74 (103)
129 2ad9_A Polypyrimidine tract-bi 21.3 2.7E+02 0.0093 21.7 6.8 53 43-97 30-85 (119)
130 2ywk_A Putative RNA-binding pr 21.2 2.2E+02 0.0077 20.4 6.2 51 46-98 18-76 (95)
131 2dnp_A RNA-binding protein 14; 21.1 2.3E+02 0.0079 20.1 7.8 54 43-98 8-62 (90)
132 2d9o_A DNAJ (HSP40) homolog, s 20.8 2.7E+02 0.0092 20.8 6.5 40 60-99 31-74 (100)
133 3bs9_A Nucleolysin TIA-1 isofo 20.7 2.2E+02 0.0077 19.9 6.1 50 47-98 9-67 (87)
134 2dgt_A RNA-binding protein 30; 20.7 2.4E+02 0.0081 20.2 7.2 52 45-98 11-63 (92)
135 1x4d_A Matrin 3; structural ge 20.5 2.6E+02 0.0087 21.1 6.3 55 42-98 13-71 (102)
136 1p27_B RNA-binding protein 8A; 20.3 2.6E+02 0.009 20.5 6.8 50 47-98 26-84 (106)
137 2fy1_A RNA-binding motif prote 20.2 1.9E+02 0.0064 22.2 5.7 50 47-98 10-67 (116)
138 4a8x_A RNA-binding protein wit 20.2 2.3E+02 0.0079 19.8 6.5 49 48-98 8-66 (88)
139 2dis_A Unnamed protein product 20.0 2.6E+02 0.009 20.7 6.5 50 47-98 11-71 (109)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=4.9e-67 Score=549.14 Aligned_cols=407 Identities=37% Similarity=0.618 Sum_probs=316.0
Q ss_pred HhcCCCCCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcch
Q psy4821 32 YIKKVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTE 108 (520)
Q Consensus 32 ~~~~~~~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~ 108 (520)
+..++.++||||++||++||++++ .++++..+.+|++||||||++++|++++|+|+||+++++++.++ .|++|+...
T Consensus 4 ~~ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~ 83 (479)
T 3tbg_A 4 KTSSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP 83 (479)
T ss_dssp -----CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred CCCCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence 334455799999999999999988 57889999999999999999999999999999999999999876 788787655
Q ss_pred hhhhhC----CchHH------------HHH-----------HHHHHHH-----------HHhCCCCCChhHHHHHHHHHH
Q psy4821 109 LSSILG----GYEVN------------VFL-----------KSLQAQA-----------ELCGATGVDVNPLLATSISNV 150 (520)
Q Consensus 109 ~~~~~~----g~~~~------------~~~-----------~~~~~~~-----------~l~~~~~~~l~~~~~~~~~~~ 150 (520)
....+. +.++. +++ ..++..+ ....++.+|+...+..++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (479)
T 3tbg_A 84 ITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNV 163 (479)
T ss_dssp GGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHH
T ss_pred HHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHH
Confidence 443321 11111 000 0111111 114667899999999999999
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhh
Q psy4821 151 ICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMA 230 (520)
Q Consensus 151 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (520)
++.++||..++..++....+.+..............
T Consensus 164 ~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 199 (479)
T 3tbg_A 164 IASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLR-------------------------------------------- 199 (479)
T ss_dssp HHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHH--------------------------------------------
T ss_pred HHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhh--------------------------------------------
Confidence 999999999998777655555444332221111000
Q ss_pred hhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCcch
Q psy4821 231 VVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFD-ASNIRD 309 (520)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~d 309 (520)
.....+|+...++. ..++.....+...+.+.+.+.+..+... .....|
T Consensus 200 ----------------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 248 (479)
T 3tbg_A 200 ----------------------------EVLNAVPVLLHIPA---LAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRD 248 (479)
T ss_dssp ----------------------------HHHHHSGGGGGSHH---HHHHHTHHHHHHHHHHHHHHHHHHHHCCTTSCCCS
T ss_pred ----------------------------hhhcccchhccchh---hHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccch
Confidence 00023344333332 3444555556666666666666655433 234567
Q ss_pred hHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH------
Q psy4821 310 MLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------ 383 (520)
Q Consensus 310 ~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------ 383 (520)
+++.++........+ ....+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+.+
T Consensus 249 ~~~~~~~~~~~~~~~--~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~ 322 (479)
T 3tbg_A 249 LTEAFLAEMEKAKGN--PESSF----NDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR 322 (479)
T ss_dssp HHHHHHHHHHHTTTC--TTCSC----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred hhhhhhhhhhhcccC--Cccch----hhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccc
Confidence 888777665543322 22236 999999999999999999999999999999999999999999999976
Q ss_pred -------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCC
Q psy4821 384 -------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPE 450 (520)
Q Consensus 384 -------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 450 (520)
|||+|+||+||+++....|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++
T Consensus 323 ~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~ 402 (479)
T 3tbg_A 323 PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ 402 (479)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTT
T ss_pred cchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCC
Confidence 9999999999999997777889999999999999999999999999999999999999999999988
Q ss_pred CCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCCC
Q psy4821 451 GKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKDE 519 (520)
Q Consensus 451 ~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 519 (520)
++..++..|+|||+|+|.|||++||.+|++++++.||++|+|+++++.+.|......+++..|++++|.
T Consensus 403 ~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~~~~v~ 471 (479)
T 3tbg_A 403 GHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELC 471 (479)
T ss_dssp CCBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEECCCCBE
T ss_pred cccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCCCeEEE
Confidence 777788899999999999999999999999999999999999998887666666667888999998874
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.1e-65 Score=541.32 Aligned_cols=406 Identities=29% Similarity=0.543 Sum_probs=320.0
Q ss_pred cCCCCCCCCCcccccccccccCC--chHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchh
Q psy4821 34 KKVRSLPPGPWGLPIIGYLPFLK--GDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTEL 109 (520)
Q Consensus 34 ~~~~~~ppgP~~~p~lG~~~~l~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~ 109 (520)
++..+.||||+++|++||++++. ++++..+.+|+++|||||++++|++++|+++||+++++++.++ .|++||....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 45567899999999999999883 4689999999999999999999999999999999999999987 7888886544
Q ss_pred hhhhC--CchHH------------H---------------HHHHHHHHH-----HH--hCCCCCChhHHHHHHHHHHHHH
Q psy4821 110 SSILG--GYEVN------------V---------------FLKSLQAQA-----EL--CGATGVDVNPLLATSISNVICS 153 (520)
Q Consensus 110 ~~~~~--g~~~~------------~---------------~~~~~~~~~-----~l--~~~~~~~l~~~~~~~~~~~i~~ 153 (520)
...+. +.++. + +...+++.+ .+ ..++.+|+...+..+++++++.
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~~ 163 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISL 163 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHH
Confidence 33221 22221 1 111222222 12 3567899999999999999999
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
++||.+++..++....+.+..+.........
T Consensus 164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 194 (494)
T 3swz_A 164 ICFNTSYKNGDPELNVIQNYNEGIIDNLSKD------------------------------------------------- 194 (494)
T ss_dssp HHHSCCCCTTCTHHHHHHHHHHHHHHHHCSS-------------------------------------------------
T ss_pred HHcCCcCCCCCHHHHHHHHHHHHHHHhcccc-------------------------------------------------
Confidence 9999998776554433333322222211111
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ 313 (520)
.+.+++|+++++|.. ..++..+..+.+.+++.+.++++++....+...|+++.
T Consensus 195 -------------------------~~~~~~P~l~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ 247 (494)
T 3swz_A 195 -------------------------SLVDLVPWLKIFPNK--TLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDT 247 (494)
T ss_dssp -------------------------SSCCSSCGGGTSCCS--HHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCCCSHHHH
T ss_pred -------------------------hHHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Confidence 112788999988876 56677778888888888888888776555556799999
Q ss_pred HHHHHHHHhhc----ccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH------
Q psy4821 314 YLFEIEKAKME----NRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------ 383 (520)
Q Consensus 314 ll~~~~~~~~~----~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------ 383 (520)
+++...+.... ......+ +++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++
T Consensus 248 ll~~~~~~~~~~~~~~~~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~ 323 (494)
T 3swz_A 248 LMQAKMNSDNGNAGPDQDSELL----SDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT 323 (494)
T ss_dssp HHHHHHTSCCC----CCSSGGG----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred HHHHHHhhhccccccccccccc----CHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCC
Confidence 99875431110 0112246 999999999999999999999999999999999999999999999976
Q ss_pred -------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCC
Q psy4821 384 -------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPE 450 (520)
Q Consensus 384 -------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 450 (520)
|||+|+||++|+++.+++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++
T Consensus 324 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~ 403 (494)
T 3swz_A 324 PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPA 403 (494)
T ss_dssp CCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGGGGBCTT
T ss_pred CCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcccccCCC
Confidence 9999999999999988899999999999999999999999999999999999999999999999876
Q ss_pred CCc--cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCCC
Q psy4821 451 GKV--TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKDE 519 (520)
Q Consensus 451 ~~~--~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 519 (520)
+.. ..+..++|||+|+|.|||++||.+|++++++.||++|+|+++++.+.|......|++..|++++|.
T Consensus 404 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~ 474 (494)
T 3swz_A 404 GTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVK 474 (494)
T ss_dssp SSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEECCCCCEE
T ss_pred CccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecCCCcEEE
Confidence 442 245789999999999999999999999999999999999998766556666666788889999874
No 3
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=1.4e-64 Score=530.23 Aligned_cols=405 Identities=33% Similarity=0.582 Sum_probs=322.9
Q ss_pred cCCCCCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhh
Q psy4821 34 KKVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELS 110 (520)
Q Consensus 34 ~~~~~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~ 110 (520)
+++.+.||||+++|++||++++ .++++..+.+|+++||+||++++|++++++++||+++++++.++ .|++++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 4556899999999999999998 67899999999999999999999999999999999999999886 67776654433
Q ss_pred hhhCCchHH-----------HHH---------------HHHHHHH-----HH--hCCCCCChhHHHHHHHHHHHHHHHhc
Q psy4821 111 SILGGYEVN-----------VFL---------------KSLQAQA-----EL--CGATGVDVNPLLATSISNVICSIVMS 157 (520)
Q Consensus 111 ~~~~g~~~~-----------~~~---------------~~~~~~~-----~l--~~~~~~~l~~~~~~~~~~~i~~~~fg 157 (520)
..+.+.++. +++ ..+++.+ .+ ..++.+|+...+..+++++++.++||
T Consensus 86 ~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~fG 165 (476)
T 3e6i_A 86 HAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFR 165 (476)
T ss_dssp GGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHHHHHS
T ss_pred heecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHHHHcC
Confidence 332211322 111 1122222 12 34678999999999999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccc
Q psy4821 158 VRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPF 237 (520)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (520)
.+++..++....+...+.+.+......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 194 (476)
T 3e6i_A 166 KHFDYNDEKFLRLMYLFNENFHLLSTPWL--------------------------------------------------- 194 (476)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHTTSHHH---------------------------------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcchhH---------------------------------------------------
Confidence 99988776665555555544332211100
Q ss_pred cccccchhHHHHHHHHHHhhhhhhcccc-cccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHH
Q psy4821 238 VKYLPGLRETRKTLSKLFETMAVVNFLP-FVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLF 316 (520)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 316 (520)
...+.+| ++.+++. ..++..+..+.+.+++.+.++++++..+.+...|+++.++.
T Consensus 195 ---------------------~~~~~~p~~~~~lp~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~~~ll~ 250 (476)
T 3e6i_A 195 ---------------------QLYNNFPSFLHYLPG---SHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLV 250 (476)
T ss_dssp ---------------------HHHHHSHHHHTTSCS---HHHHHHHHHHHHHHHHHHHHHHHHHTCCTTSCCSHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccHHHHHHH
Confidence 0114566 6667764 45667788888999999999988877555556799999997
Q ss_pred HHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-------------
Q psy4821 317 EIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------------- 383 (520)
Q Consensus 317 ~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------------- 383 (520)
...+++.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 251 ~~~~~~~~--~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~ 324 (476)
T 3e6i_A 251 EMEKEKHS--AERLY----TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQ 324 (476)
T ss_dssp HHHSSSSC--SSCSC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGGGGG
T ss_pred HHHhcccC--CCCCc----CHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChhhcc
Confidence 65532211 11236 999999999999999999999999999999999999999999999976
Q ss_pred ------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCC
Q psy4821 384 ------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457 (520)
Q Consensus 384 ------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~ 457 (520)
|||+|+||++|+++.+++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++....+.
T Consensus 325 ~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~ 404 (476)
T 3e6i_A 325 EMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSD 404 (476)
T ss_dssp GCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSSBCCCT
T ss_pred CCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCCCCCccCcc
Confidence 89999999999999778999999999999999999999999999999999999999999999998776656678
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCC-CCceeecCCCCCCC
Q psy4821 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKG-NAGVTITPDSHKDE 519 (520)
Q Consensus 458 ~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~ 519 (520)
.|+|||+|+|.|+|++||.+|++++++.||++|+|+++.+...+++.. ..|++..|.+++|+
T Consensus 405 ~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 467 (476)
T 3e6i_A 405 YFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLC 467 (476)
T ss_dssp TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEE
T ss_pred ceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEE
Confidence 899999999999999999999999999999999999864433233443 36888889988874
No 4
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-64 Score=533.57 Aligned_cols=407 Identities=29% Similarity=0.559 Sum_probs=299.5
Q ss_pred hcCCCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhh
Q psy4821 33 IKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELS 110 (520)
Q Consensus 33 ~~~~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~ 110 (520)
++++.+.||||+++|++||++.+.++++..+.+|+++||+||++++|+.++++++||+++++|+.++ .|.+++.....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 4456688999999999999999988999999999999999999999999999999999999999765 78877765543
Q ss_pred hhh-CCchHH------------H-------------------HHHHHHHHH-----HH----hCCCCCChhHHHHHHHHH
Q psy4821 111 SIL-GGYEVN------------V-------------------FLKSLQAQA-----EL----CGATGVDVNPLLATSISN 149 (520)
Q Consensus 111 ~~~-~g~~~~------------~-------------------~~~~~~~~~-----~l----~~~~~~~l~~~~~~~~~~ 149 (520)
... .|.++. + +...+++.+ .+ ..++.+|+...+..++++
T Consensus 84 ~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d 163 (507)
T 3pm0_A 84 RVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVAN 163 (507)
T ss_dssp HHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHH
T ss_pred HhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHH
Confidence 222 222221 1 111122222 11 246789999999999999
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhh
Q psy4821 150 VICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETM 229 (520)
Q Consensus 150 ~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (520)
+++.++||.+++..++....+.+.+.+........
T Consensus 164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 198 (507)
T 3pm0_A 164 VMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAG--------------------------------------------- 198 (507)
T ss_dssp HHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTT---------------------------------------------
T ss_pred HHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccc---------------------------------------------
Confidence 99999999998876655444443333322221111
Q ss_pred hhhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCch-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCc
Q psy4821 230 AVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLR-ETRKTLSKNRVEMGAYFQEKINEHRTTFDA-SNI 307 (520)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 307 (520)
...+++|+++++|... ...++..+..+.+.+++.+.++++++.... +..
T Consensus 199 -----------------------------~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (507)
T 3pm0_A 199 -----------------------------SLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAP 249 (507)
T ss_dssp -----------------------------CCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCCC
T ss_pred -----------------------------hHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 1126788888887531 135667778888889999999888776544 446
Q ss_pred chhHHHHHHHHHHHhhcc--cccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH--
Q psy4821 308 RDMLDSYLFEIEKAKMEN--RSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-- 383 (520)
Q Consensus 308 ~d~l~~ll~~~~~~~~~~--~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-- 383 (520)
.|+++.+++.......+. ..+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 250 ~d~l~~ll~~~~~~~~~~~~~~~~~l----~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 325 (507)
T 3pm0_A 250 RDMMDAFILSAEKKAAGDSHGGGARL----DLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 325 (507)
T ss_dssp CSHHHHHHHHHHHHHSCC----CCCC----CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHhhhhccccccCCCCCC----CHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence 899999996654432111 011136 999999999999999999999999999999999999999999999976
Q ss_pred -----------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCcc
Q psy4821 384 -----------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRF 446 (520)
Q Consensus 384 -----------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf 446 (520)
|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus 326 ~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRf 405 (507)
T 3pm0_A 326 RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405 (507)
T ss_dssp TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCCGGGG
T ss_pred CCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccCCCcc
Confidence 899999999999998789999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc--CCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCC
Q psy4821 447 LTPEGKVT--KPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKD 518 (520)
Q Consensus 447 l~~~~~~~--~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 518 (520)
+++++... .+..++|||+|+|.|||++||.+|++++++.||++|+|++.++.+ +++....|++..|++++|
T Consensus 406 l~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~v 478 (507)
T 3pm0_A 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKMNFSYGLTIKPKSFKV 478 (507)
T ss_dssp BCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCC-SCCCEEESSSEEECSCCE
T ss_pred cCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCC-CCCCCCCCccccCCCcEE
Confidence 98665422 136899999999999999999999999999999999999976643 334444567777877665
No 5
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=8.8e-64 Score=524.39 Aligned_cols=403 Identities=36% Similarity=0.652 Sum_probs=312.6
Q ss_pred CCCCCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhhh
Q psy4821 35 KVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELSS 111 (520)
Q Consensus 35 ~~~~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~~ 111 (520)
++.+.||||+++|++||++.+ .++++..+.+|+++|||||++++|++++++++||+++++|+.+. .|++++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 344789999999999999988 67899999999999999999999999999999999999999654 676655432221
Q ss_pred hh-CCchHH-----------HHH-----------HHHHHHH---------HH--hCCCCCChhHHHHHHHHHHHHHHHhc
Q psy4821 112 IL-GGYEVN-----------VFL-----------KSLQAQA---------EL--CGATGVDVNPLLATSISNVICSIVMS 157 (520)
Q Consensus 112 ~~-~g~~~~-----------~~~-----------~~~~~~~---------~l--~~~~~~~l~~~~~~~~~~~i~~~~fg 157 (520)
.. .|.++. +++ +.+++.+ ++ ..++.+|+.+.+..+++++++.++||
T Consensus 87 ~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG 166 (476)
T 1po5_A 87 PIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166 (476)
T ss_dssp SCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHS
T ss_pred hhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHHcC
Confidence 11 222222 111 1122222 12 23568999999999999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccc
Q psy4821 158 VRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPF 237 (520)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (520)
.+++..++++..+.+.+.+.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 194 (476)
T 1po5_A 167 KRFDYKDPVFLRLLDLFFQSFSLISSFS---------------------------------------------------- 194 (476)
T ss_dssp SCCCTTCHHHHHHHHHHHHHTTTCCTTH----------------------------------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcchh----------------------------------------------------
Confidence 9887655544444443333221100000
Q ss_pred cccccchhHHHHHHHHHHhhhhhhccccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHH
Q psy4821 238 VKYLPGLRETRKTLSKLFETMAVVNFLPF-VKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLF 316 (520)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 316 (520)
....+.+|+ +++++.. .++..++.+.+.+++.+.++++++..+.+...|+++.++.
T Consensus 195 --------------------~~~~~~~P~~~~~lp~~---~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~ 251 (476)
T 1po5_A 195 --------------------SQVFELFSGFLKHFPGT---HRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLL 251 (476)
T ss_dssp --------------------HHHHHHTHHHHHTSSCS---HHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCSHHHHHHH
T ss_pred --------------------hHHHHhhhHHHHhcCcH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccHHHHHHH
Confidence 001145664 5556653 4566777888999999999988875444445799999997
Q ss_pred HHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-------------
Q psy4821 317 EIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------------- 383 (520)
Q Consensus 317 ~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------------- 383 (520)
...+.+.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 252 ~~~~~~~~--~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~ 325 (476)
T 1po5_A 252 RMEKDKSD--PSSEF----HHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRA 325 (476)
T ss_dssp HHHHHTCC--TTCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGG
T ss_pred HHHhhccC--CCCCC----CHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHHh
Confidence 65432111 11236 999999999999999999999999999999999999999999999865
Q ss_pred ------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCC
Q psy4821 384 ------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457 (520)
Q Consensus 384 ------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~ 457 (520)
+||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++....+.
T Consensus 326 ~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~~~~~~ 405 (476)
T 1po5_A 326 KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405 (476)
T ss_dssp GCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCCT
T ss_pred cCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCCccCCc
Confidence 89999999999999768999999999999999999999999999999999999999999999998665544567
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCC-CCceeecCCCCCC
Q psy4821 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKG-NAGVTITPDSHKD 518 (520)
Q Consensus 458 ~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~p~~~~~ 518 (520)
.|+|||+|+|.|+|++||.+|++++++.||++|++++.++.+.++... ..|++..|.+++|
T Consensus 406 ~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v 467 (476)
T 1po5_A 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQI 467 (476)
T ss_dssp TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCCCCCCB
T ss_pred cccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecCcceEE
Confidence 899999999999999999999999999999999999977643334444 5677888887766
No 6
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.1e-63 Score=524.41 Aligned_cols=405 Identities=31% Similarity=0.576 Sum_probs=317.3
Q ss_pred cCCCCCCCCCcccccccccccCCch---HHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcch
Q psy4821 34 KKVRSLPPGPWGLPIIGYLPFLKGD---AHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTE 108 (520)
Q Consensus 34 ~~~~~~ppgP~~~p~lG~~~~l~~~---~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~ 108 (520)
+++.+.||||+++|++||+..+..+ ++..+.+|+++|||||++++|+.++++++||+++++++.++ .|++++...
T Consensus 8 ~~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 8 RRPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp ----CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 3556789999999999999887433 89999999999999999999999999999999999999876 687776543
Q ss_pred hhhhh-CCchHH------------HHH-----------HHHHHHH---------HH--hCCCCCChhHHHHHHHHHHHHH
Q psy4821 109 LSSIL-GGYEVN------------VFL-----------KSLQAQA---------EL--CGATGVDVNPLLATSISNVICS 153 (520)
Q Consensus 109 ~~~~~-~g~~~~------------~~~-----------~~~~~~~---------~l--~~~~~~~l~~~~~~~~~~~i~~ 153 (520)
....+ .+.++. +++ ..+++.+ .+ .+++.+|+...+..++.++++.
T Consensus 88 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~ 167 (481)
T 3czh_A 88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNL 167 (481)
T ss_dssp HHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHHH
Confidence 22211 111211 111 1122222 12 2356799999999999999999
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
++||.+++..+++...+.+.+.+.........
T Consensus 168 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 199 (481)
T 3czh_A 168 IIFGERFTYEDTDFQHMIELFSENVELAASAS------------------------------------------------ 199 (481)
T ss_dssp HHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHH------------------------------------------------
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHhhhccch------------------------------------------------
Confidence 99999887656555555544444332211100
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ 313 (520)
..+.+.+|+++++|.. ..++..++.+.+.+++.+.++++++....+...|+++.
T Consensus 200 ------------------------~~~~~~~p~l~~lp~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ 253 (481)
T 3czh_A 200 ------------------------VFLYNAFPWIGILPFG--KHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDA 253 (481)
T ss_dssp ------------------------HHHHHHCGGGGGCSSS--HHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCCSSHHHH
T ss_pred ------------------------hHHhhhhHHHHhCCch--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 0012567877777754 56777888888999999999988876444445799999
Q ss_pred HHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH----------
Q psy4821 314 YLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV---------- 383 (520)
Q Consensus 314 ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~---------- 383 (520)
+++...+.+.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 254 ll~~~~~~~~~--~~~~l----~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~ 327 (481)
T 3czh_A 254 YLDEMDQGKND--PSSTF----SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWD 327 (481)
T ss_dssp HHHHHHHTTTC--TTCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGG
T ss_pred HHHHHHhcccC--ccccc----cHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCChh
Confidence 99775432111 11136 999999999999999999999999999999999999999999999864
Q ss_pred ---------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCcc
Q psy4821 384 ---------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVT 454 (520)
Q Consensus 384 ---------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~ 454 (520)
|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++...
T Consensus 328 ~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~ 407 (481)
T 3czh_A 328 DKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFA 407 (481)
T ss_dssp GGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSCBC
T ss_pred hhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeCCCCCCc
Confidence 99999999999999768999999999999999999999999999999999999999999999997655445
Q ss_pred CCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCCC
Q psy4821 455 KPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKDE 519 (520)
Q Consensus 455 ~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 519 (520)
.+..|+|||+|+|.|+|++||.+|++++++.||++|+++++++.+ +++....|++..|.+++|.
T Consensus 408 ~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~~~ 471 (481)
T 3czh_A 408 KKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV-PDLKPRLGMTLQPQPYLIC 471 (481)
T ss_dssp CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCC-CCCCCCSSSSCCCCCCCBE
T ss_pred CCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCC-CCcccCCCceecCCceEEE
Confidence 667899999999999999999999999999999999999876543 3344456888889988763
No 7
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1e-63 Score=524.00 Aligned_cols=406 Identities=34% Similarity=0.566 Sum_probs=303.9
Q ss_pred HhcCCC-CCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcc
Q psy4821 32 YIKKVR-SLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHT 107 (520)
Q Consensus 32 ~~~~~~-~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~ 107 (520)
++|+++ +.||||+++|++||++.+ .++++..+.+|+++|||||++++|+.++++++||+++++|+.+. .|++++..
T Consensus 4 ~~~~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~ 83 (477)
T 1r9o_A 4 KTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIF 83 (477)
T ss_dssp -----CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCC
T ss_pred ccccCCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcc
Confidence 334443 689999999999999988 57899999999999999999999999999999999999999654 67665432
Q ss_pred hhhhhh-CCchHH-----------HH---------------HHHHHHHH-----HH--hCCCCCChhHHHHHHHHHHHHH
Q psy4821 108 ELSSIL-GGYEVN-----------VF---------------LKSLQAQA-----EL--CGATGVDVNPLLATSISNVICS 153 (520)
Q Consensus 108 ~~~~~~-~g~~~~-----------~~---------------~~~~~~~~-----~l--~~~~~~~l~~~~~~~~~~~i~~ 153 (520)
...... .|.++. ++ ...+++.+ ++ ..++.+|+...+..+++++++.
T Consensus 84 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~ 163 (477)
T 1r9o_A 84 PLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICS 163 (477)
T ss_dssp SCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHH
T ss_pred hhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence 211111 222222 11 11222222 22 2356799999999999999999
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
++||.+++..+++...+.+.+.+..........
T Consensus 164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 196 (477)
T 1r9o_A 164 IIFHKRFDYKDQQFLNLMEKLNENIKILSSPWI----------------------------------------------- 196 (477)
T ss_dssp HHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-----------------------------------------------
T ss_pred HHccCcCCCCCHHHHHHHHHHHHHHHhhccchh-----------------------------------------------
Confidence 999999876665444444443332211110000
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhccccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPF-VKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLD 312 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~ 312 (520)
...+.+|+ +++++.. .++..++.+.+.+++.+.++++++....+...|+++
T Consensus 197 -------------------------~~~~~~p~l~~~lp~~---~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~ 248 (477)
T 1r9o_A 197 -------------------------QICNNFSPIIDYFPGT---HNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFID 248 (477)
T ss_dssp --------------------------------CCCSCCTTC---HHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCSHHH
T ss_pred -------------------------HHHhhccHHHHhcchH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHH
Confidence 01145675 5556653 456677788889999999998887544444579999
Q ss_pred HHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH---------
Q psy4821 313 SYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV--------- 383 (520)
Q Consensus 313 ~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~--------- 383 (520)
.+++...+.+.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 249 ~ll~~~~~~~~~--~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~ 322 (477)
T 1r9o_A 249 CFLMKMEKEKHN--QPSEF----TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCM 322 (477)
T ss_dssp HHHHHHHHHTTS--CSCSC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCG
T ss_pred HHHHHHHhhhcc--CCCCC----CHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCh
Confidence 999754432111 11236 999999999999999999999999999999999999999999999865
Q ss_pred ----------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCc
Q psy4821 384 ----------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV 453 (520)
Q Consensus 384 ----------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~ 453 (520)
+||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++..
T Consensus 323 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~~ 402 (477)
T 1r9o_A 323 QDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNF 402 (477)
T ss_dssp GGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSCB
T ss_pred HhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCCc
Confidence 9999999999999976899999999999999999999999999999999999999999999999866554
Q ss_pred cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCC-CCceeecCCCCCC
Q psy4821 454 TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKG-NAGVTITPDSHKD 518 (520)
Q Consensus 454 ~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~p~~~~~ 518 (520)
..+..|+|||+|+|.|+|++||.+|++++++.||++|+|++.++.+.++... ..+++..|.+++|
T Consensus 403 ~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 468 (477)
T 1r9o_A 403 KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQL 468 (477)
T ss_dssp CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBCCCCCE
T ss_pred CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecCCCeEE
Confidence 4567899999999999999999999999999999999999876643333434 5677888877765
No 8
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.3e-64 Score=527.55 Aligned_cols=401 Identities=30% Similarity=0.598 Sum_probs=315.3
Q ss_pred CCCCCC--CCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhh
Q psy4821 35 KVRSLP--PGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELS 110 (520)
Q Consensus 35 ~~~~~p--pgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~ 110 (520)
++++.| |||+++|++||++.+.++++..+.+|+++|||||++++|++++++++||+++++++.++ .|++++.....
T Consensus 11 ~~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~ 90 (495)
T 2hi4_A 11 VPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS 90 (495)
T ss_dssp CCTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred CCCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence 444445 99999999999988877899999999999999999999999999999999999999876 67777644322
Q ss_pred hhh-CCchH--------H-----HHH-H-----------------HHHHHH---------HH----hCCCCCChhHHHHH
Q psy4821 111 SIL-GGYEV--------N-----VFL-K-----------------SLQAQA---------EL----CGATGVDVNPLLAT 145 (520)
Q Consensus 111 ~~~-~g~~~--------~-----~~~-~-----------------~~~~~~---------~l----~~~~~~~l~~~~~~ 145 (520)
..+ .|.++ . +++ . .+++.+ .+ ..++.+|+...+..
T Consensus 91 ~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~ 170 (495)
T 2hi4_A 91 TLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVV 170 (495)
T ss_dssp HTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHH
T ss_pred HHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHH
Confidence 211 11111 0 111 0 233332 12 34578999999999
Q ss_pred HHHHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhh
Q psy4821 146 SISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKL 225 (520)
Q Consensus 146 ~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (520)
++.++++.++||.+++..+++...+.+.+++........
T Consensus 171 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------- 209 (495)
T 2hi4_A 171 SVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSG----------------------------------------- 209 (495)
T ss_dssp HHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTT-----------------------------------------
T ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccc-----------------------------------------
Confidence 999999999999988765554444433332221111000
Q ss_pred hhhhhhhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy4821 226 FETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDAS 305 (520)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 305 (520)
...+++|+++++|.. ..++..++.+.+.+++.+.++++++....+
T Consensus 210 ---------------------------------~~~~~~p~l~~lp~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 254 (495)
T 2hi4_A 210 ---------------------------------NPLDFFPILRYLPNP--ALQRFKAFNQRFLWFLQKTVQEHYQDFDKN 254 (495)
T ss_dssp ---------------------------------CGGGTCGGGGGSCCH--HHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred ---------------------------------hHHHHhHHHHhcCch--HHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 011677888877754 567778888899999999999888764444
Q ss_pred CcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH--
Q psy4821 306 NIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-- 383 (520)
Q Consensus 306 ~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-- 383 (520)
...|+++.+++...+.+.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++||+++
T Consensus 255 ~~~d~l~~ll~~~~~~~~~--~~~~l----~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~ 328 (495)
T 2hi4_A 255 SVRDITGALFKHSKKGPRA--SGNLI----PQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIG 328 (495)
T ss_dssp CCCSHHHHHHHHHHHCCEE--TTEEC----CTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHhhhccCc--cccCC----CHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcC
Confidence 4579999999754331111 11236 999999999999999999999999999999999999999999999865
Q ss_pred -----------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCcc
Q psy4821 384 -----------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRF 446 (520)
Q Consensus 384 -----------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf 446 (520)
+||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||
T Consensus 329 ~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf 408 (495)
T 2hi4_A 329 RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 408 (495)
T ss_dssp TSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGGGG
T ss_pred CCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCcccc
Confidence 999999999999997789999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-c--cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCC-CC
Q psy4821 447 LTPEGK-V--TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSH-KD 518 (520)
Q Consensus 447 l~~~~~-~--~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~-~~ 518 (520)
+++++. . ..+..|+|||+|+|.|+|++||.+|++++++.||++|+|+++++.+ +++....|++..|.++ +|
T Consensus 409 l~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~~v 483 (495)
T 2hi4_A 409 LTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK-VDLTPIYGLTMKHARCEHV 483 (495)
T ss_dssp BCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCC-CCCCCBCSSSCBCCCCCCB
T ss_pred cCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCC-CCccccCCceecCCCcceE
Confidence 976543 1 2356799999999999999999999999999999999999876543 4454556888889887 65
No 9
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=2.1e-63 Score=521.53 Aligned_cols=402 Identities=31% Similarity=0.564 Sum_probs=314.9
Q ss_pred CCCCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhhhh
Q psy4821 36 VRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELSSI 112 (520)
Q Consensus 36 ~~~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~~~ 112 (520)
+.+.||||+++|++||++.+ .++++..+.+|+++|||||++++|++++++++||+++++|+.++ .|++++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 2fdv_A 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW 87 (476)
T ss_dssp CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred cCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence 33789999999999999988 57899999999999999999999999999999999999999654 6776654322211
Q ss_pred h-CCchHH----------------HHH------HHHHHHH---------HH--hCCCCCChhHHHHHHHHHHHHHHHhcc
Q psy4821 113 L-GGYEVN----------------VFL------KSLQAQA---------EL--CGATGVDVNPLLATSISNVICSIVMSV 158 (520)
Q Consensus 113 ~-~g~~~~----------------~~~------~~~~~~~---------~l--~~~~~~~l~~~~~~~~~~~i~~~~fg~ 158 (520)
. .|.++. .|. +.+++.+ ++ ..++.+|+.+++..+++++++.++||.
T Consensus 88 ~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 167 (476)
T 2fdv_A 88 VFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGD 167 (476)
T ss_dssp HHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred hcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHcCC
Confidence 1 222222 110 1222222 12 245689999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhcccccc
Q psy4821 159 RFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFV 238 (520)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (520)
+++..+++...+.+.+.+..........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 195 (476)
T 2fdv_A 168 RFDYKDKEFLSLLRMMLGIFQFTSTSTG---------------------------------------------------- 195 (476)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHTSHHH----------------------------------------------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHhhccccc----------------------------------------------------
Confidence 9886665555555444433221110000
Q ss_pred ccccchhHHHHHHHHHHhhhhhhccccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHH
Q psy4821 239 KYLPGLRETRKTLSKLFETMAVVNFLPF-VKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFE 317 (520)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 317 (520)
.+.+.+|+ +++++. ..++..++.+.+.+++.+.++++++..+.+...|+++.+++.
T Consensus 196 --------------------~~~~~~p~l~~~l~~---~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~ 252 (476)
T 2fdv_A 196 --------------------QLYEMFSSVMKHLPG---PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIR 252 (476)
T ss_dssp --------------------HHHHHHHHHHTTSCS---HHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCSHHHHHHHH
T ss_pred --------------------chhhhhhhHHHhcCc---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 01145564 555663 356677788889999999999888754444457999999987
Q ss_pred HHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH--------------
Q psy4821 318 IEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------------- 383 (520)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-------------- 383 (520)
..+.+.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 253 ~~~~~~~--~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 326 (476)
T 2fdv_A 253 MQEEEKN--PNTEF----YLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326 (476)
T ss_dssp HHHTTTC--TTCSC----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGG
T ss_pred HHhcccC--ccccc----cHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhhhhc
Confidence 5432111 11236 999999999999999999999999999999999999999999999864
Q ss_pred -----hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCc
Q psy4821 384 -----ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF 458 (520)
Q Consensus 384 -----a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~ 458 (520)
+||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++++....+..
T Consensus 327 lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~~~~~~~ 406 (476)
T 2fdv_A 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406 (476)
T ss_dssp CHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCCTT
T ss_pred ChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCCCCCCcC
Confidence 999999999999996689999999999999999999999999999999999999999999999986655445678
Q ss_pred ccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCC-CCceeecCCCCCC
Q psy4821 459 FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKG-NAGVTITPDSHKD 518 (520)
Q Consensus 459 ~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~p~~~~~ 518 (520)
|+|||+|+|.|+|++||.+|++++++.||++|+++++++.+.++... ..|++..|.+++|
T Consensus 407 ~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v 467 (476)
T 2fdv_A 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTM 467 (476)
T ss_dssp CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEECCCCCE
T ss_pred cccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecCCceEE
Confidence 99999999999999999999999999999999999977643334444 5677888887765
No 10
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=7.5e-63 Score=519.85 Aligned_cols=396 Identities=28% Similarity=0.537 Sum_probs=303.4
Q ss_pred HhcCCCCCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcch
Q psy4821 32 YIKKVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTE 108 (520)
Q Consensus 32 ~~~~~~~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~ 108 (520)
+.+++.+.||||++ ++++ .++++..+.+|+++|||||++++|++++++++||+++++++.++ .|++++...
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 34566789999987 4444 67899999999999999999999999999999999999999886 687777554
Q ss_pred hhhhh-CCc-hHH------------H-------------HHHHHHHHH-----HH--hCCCCCChhHHHHHHHHHHHHHH
Q psy4821 109 LSSIL-GGY-EVN------------V-------------FLKSLQAQA-----EL--CGATGVDVNPLLATSISNVICSI 154 (520)
Q Consensus 109 ~~~~~-~g~-~~~------------~-------------~~~~~~~~~-----~l--~~~~~~~l~~~~~~~~~~~i~~~ 154 (520)
..... .|. ++. + +...+++.+ ++ ..++.+|+...+..++.++++.+
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~ 176 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYL 176 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTT
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence 33221 111 111 1 112222222 22 34678999999999999999999
Q ss_pred HhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhcc
Q psy4821 155 VMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNF 234 (520)
Q Consensus 155 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (520)
+||. ..++....+.+.+.+........
T Consensus 177 ~fG~---~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 203 (496)
T 3qz1_A 177 TFGN---KEDTLVHAFHDCVQDLMKTWDHW-------------------------------------------------- 203 (496)
T ss_dssp STTC---CCHHHHHHHHHHHHTTTTTTSSH--------------------------------------------------
T ss_pred hcCC---CCChHHHHHHHHHHHHHHHhccc--------------------------------------------------
Confidence 9998 22333344444443322211100
Q ss_pred ccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHH
Q psy4821 235 LPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSY 314 (520)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~l 314 (520)
.....+.+|+++++|.. ..++..+..+.+.+++.+.++++++....+...|+++.+
T Consensus 204 ----------------------~~~~~~~~P~l~~lp~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~l 259 (496)
T 3qz1_A 204 ----------------------SIQILDMVPFLRFFPNP--GLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYM 259 (496)
T ss_dssp ----------------------HHHHHHHCGGGCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSSSHHHH
T ss_pred ----------------------hhHHHHhHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchHHHH
Confidence 00122678888888865 577788888999999999999988876555668999999
Q ss_pred HHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-----------
Q psy4821 315 LFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV----------- 383 (520)
Q Consensus 315 l~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~----------- 383 (520)
++...+...+. ....+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 260 l~~~~~~~~~~-~~~~l----~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~ 334 (496)
T 3qz1_A 260 LQGVGRQRVEE-GPGQL----LEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT 334 (496)
T ss_dssp TTSSTTCCC------CC----CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS
T ss_pred HHHHHhccccC-Ccccc----cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 87543211000 00135 999999999999999999999999999999999999999999999853
Q ss_pred -----------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCC
Q psy4821 384 -----------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGK 452 (520)
Q Consensus 384 -----------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~ 452 (520)
|||+|+||++|+++.+++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++
T Consensus 335 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~-- 412 (496)
T 3qz1_A 335 YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG-- 412 (496)
T ss_dssp TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC-----
T ss_pred hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCC--
Confidence 7999999999999987899999999999999999999999999999999999999999999999765
Q ss_pred ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCC--CceeecCCCCCCC
Q psy4821 453 VTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGN--AGVTITPDSHKDE 519 (520)
Q Consensus 453 ~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~ 519 (520)
....++|||.|+|.|+|++||.+|++++++.||++|+|++++++..+++... .|++..|++++|.
T Consensus 413 --~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 479 (496)
T 3qz1_A 413 --ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVR 479 (496)
T ss_dssp --CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCCCCCCC
T ss_pred --CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCCceEEE
Confidence 2237899999999999999999999999999999999999865443444433 5888899988875
No 11
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1.1e-61 Score=508.77 Aligned_cols=374 Identities=21% Similarity=0.318 Sum_probs=294.6
Q ss_pred HHHhcCCCCCCCCCcccccccccccC-----CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccC
Q psy4821 30 MLYIKKVRSLPPGPWGLPIIGYLPFL-----KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSG 103 (520)
Q Consensus 30 ~~~~~~~~~~ppgP~~~p~lG~~~~l-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~ 103 (520)
+....++.+.+|||+++|++||++.+ .++++..+.+|+++|||||++++|+.++|+++||+++++|+.+. .|.+
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~ 95 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQ 95 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTCCSSCC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhcCCCCC
Confidence 44456778899999999999999876 35789999999999999999999999999999999999999987 7877
Q ss_pred CCcchhh---hhh--CCchHH-----------H-----H---------HHHHHHHH-----HH-----hCCCCCChhHHH
Q psy4821 104 RPHTELS---SIL--GGYEVN-----------V-----F---------LKSLQAQA-----EL-----CGATGVDVNPLL 143 (520)
Q Consensus 104 r~~~~~~---~~~--~g~~~~-----------~-----~---------~~~~~~~~-----~l-----~~~~~~~l~~~~ 143 (520)
++....+ ... .|.++. + | ...+++.+ .+ ..++.+|+...+
T Consensus 96 r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~ 175 (482)
T 3k9v_A 96 RLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSEL 175 (482)
T ss_dssp CCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHH
T ss_pred CCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHH
Confidence 7653221 111 233332 1 1 11112221 11 146689999999
Q ss_pred HHHHHHHHHHHHhcccCCCCC----hHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCC
Q psy4821 144 ATSISNVICSIVMSVRFSNED----PQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQP 219 (520)
Q Consensus 144 ~~~~~~~i~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (520)
..+++++++.++||.+++..+ .....+.+.+.........
T Consensus 176 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 219 (482)
T 3k9v_A 176 NKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK------------------------------------ 219 (482)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG------------------------------------
T ss_pred HHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH------------------------------------
Confidence 999999999999999986543 2223444444332221110
Q ss_pred CCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhcccc--cccccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4821 220 NEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLP--FVKYLPGLRETRKTLSKNRVEMGAYFQEKINE 297 (520)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (520)
...+| +.++++.. .+++..+..+.+.+++.+.+++
T Consensus 220 -----------------------------------------~~~~p~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~i~~ 256 (482)
T 3k9v_A 220 -----------------------------------------MMVTPVELHKRLNTK--VWQAHTLAWDTIFKSVKPCIDN 256 (482)
T ss_dssp -----------------------------------------GSSSCHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------HHhhhHHHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 02223 33344433 4566677777888888888888
Q ss_pred hhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHH
Q psy4821 298 HRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQ 377 (520)
Q Consensus 298 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr 377 (520)
+++....+...|+++.+++.. .+ +++++.+++.++++||+|||+++++|++++|++||++|+|||
T Consensus 257 r~~~~~~~~~~d~l~~ll~~~-----------~l----~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~ 321 (482)
T 3k9v_A 257 RLQRYSQQPGADFLCDIYQQD-----------HL----SKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLL 321 (482)
T ss_dssp HHHHTTTCTTSCHHHHHHHHT-----------CC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhccCCchHHHHHHHhcc-----------CC----CHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence 876544444567887777431 26 999999999999999999999999999999999999999999
Q ss_pred HHHHhH-------------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCC
Q psy4821 378 DELDTV-------------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESP 438 (520)
Q Consensus 378 ~Ei~~~-------------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p 438 (520)
+||+++ |||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||
T Consensus 322 ~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 400 (482)
T 3k9v_A 322 QEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDS 400 (482)
T ss_dssp HHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSST
T ss_pred HHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCCc
Confidence 999986 899999999999998 799999999999999999999999999999999999999
Q ss_pred CCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCC
Q psy4821 439 EDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQP 499 (520)
Q Consensus 439 ~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~ 499 (520)
++|+||||++++.+ ..+..|+|||.|+|.|+|++||.+|++++++.||++|+|++.++.+
T Consensus 401 ~~F~PeRfl~~~~~-~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~ 460 (482)
T 3k9v_A 401 HKFRPERWLQKEKK-INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP 460 (482)
T ss_dssp TSCCGGGGTCTTSC-CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCC
T ss_pred CccCccccCCCCCC-CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCC
Confidence 99999999986543 4567899999999999999999999999999999999999876543
No 12
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=5.6e-63 Score=519.32 Aligned_cols=404 Identities=20% Similarity=0.273 Sum_probs=288.2
Q ss_pred HHHhcCCCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc---cccCCCc
Q psy4821 30 MLYIKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE---EFSGRPH 106 (520)
Q Consensus 30 ~~~~~~~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~---~~~~r~~ 106 (520)
+.+...+++.||||+++|++||++.+.++++.++.+|+++|||||++++|++++|+++||+++++++.++ .|.+++.
T Consensus 6 ~~~~~~k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~ 85 (485)
T 3nxu_A 6 HSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP 85 (485)
T ss_dssp -CTTHHHHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCC
T ss_pred ccchHHhhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcc
Confidence 3333334467899999999999999988899999999999999999999999999999999999999875 4665554
Q ss_pred chhhhhhCCchHH------------------------HHHHHHHHHH-----HH----hCCCCCChhHHHHHHHHHHHHH
Q psy4821 107 TELSSILGGYEVN------------------------VFLKSLQAQA-----EL----CGATGVDVNPLLATSISNVICS 153 (520)
Q Consensus 107 ~~~~~~~~g~~~~------------------------~~~~~~~~~~-----~l----~~~~~~~l~~~~~~~~~~~i~~ 153 (520)
....... +.++. .+...+++.+ .+ ..++.+|+...+..++.++++.
T Consensus 86 ~~~~~~~-~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 86 FGPVGFM-KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp CSCCGGG-GGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHH
T ss_pred ccccccc-ccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHH
Confidence 3322111 11111 1112222222 11 3577899999999999999999
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
++||.+++..+.....+.+.+............
T Consensus 165 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 197 (485)
T 3nxu_A 165 TSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPF----------------------------------------------- 197 (485)
T ss_dssp HHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHH-----------------------------------------------
T ss_pred HHcCCccccccCCCcHHHHHHHHHhchhhHHHH-----------------------------------------------
Confidence 999998876322111222222211110000000
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccc----cccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcch
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFV----KYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRD 309 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d 309 (520)
......+|++ ..++... . ..+..+.+.+.+.+.++++.+. ......|
T Consensus 198 ------------------------~~~~~~~p~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d 248 (485)
T 3nxu_A 198 ------------------------FLSITVFPFLIPILEVLNICV-F---PREVTNFLRKSVKRMKESRLED-TQKHRVD 248 (485)
T ss_dssp ------------------------HHHHHHCTTHHHHHHHTTCCS-S---CHHHHHHHHHHHHHHHHHHHHC-C---CCC
T ss_pred ------------------------HHHHHHhhhhHHHHHHhhhhh-c---hHHHHHHHHHHHHHHHHHHHhc-cCCCccc
Confidence 0000223322 1121110 0 0122333444455545444332 2334579
Q ss_pred hHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH------
Q psy4821 310 MLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------ 383 (520)
Q Consensus 310 ~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------ 383 (520)
+++.+++.......+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 249 ~l~~ll~~~~~~~~~--~~~~l----~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~ 322 (485)
T 3nxu_A 249 FLQLMIDSQNSKETE--SHKAL----SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 322 (485)
T ss_dssp HHHHHHHHHC----------CC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCC
T ss_pred HHHHHHHhhhccccc--cccCC----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCC
Confidence 999999875432211 11236 999999999999999999999999999999999999999999999875
Q ss_pred -------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCC
Q psy4821 384 -------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPE 450 (520)
Q Consensus 384 -------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 450 (520)
|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++
T Consensus 323 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~ 401 (485)
T 3nxu_A 323 PTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 401 (485)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHH
T ss_pred CCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCc
Confidence 899999999999987 899999999999999999999999999999999999999999999999765
Q ss_pred CCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecC-CCCCC
Q psy4821 451 GKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITP-DSHKD 518 (520)
Q Consensus 451 ~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~~ 518 (520)
....++..|+|||.|+|.|+|++||.+|++++++.||++|+|++.++...+ +....+.++.| ++++|
T Consensus 402 ~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~p~~~~~~ 469 (485)
T 3nxu_A 402 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP-LKLSLGGLLQPEKPVVL 469 (485)
T ss_dssp HTTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSS-CCBCSSSSCCBSSCCEE
T ss_pred cccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCC-cccCCCeeccCCCCeEE
Confidence 444466789999999999999999999999999999999999987664322 33333445555 45554
No 13
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.5e-62 Score=512.85 Aligned_cols=384 Identities=19% Similarity=0.286 Sum_probs=299.5
Q ss_pred CCCCCCCcc-cccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhh-hh
Q psy4821 37 RSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELS-SI 112 (520)
Q Consensus 37 ~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~-~~ 112 (520)
.+.||+|++ +|++||++++.++++.++.+|++||||||++++|+.++|+++||+++++++.++ .|+.++..... ..
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence 356788775 999999999988999999999999999999999999999999999999999876 56665543322 22
Q ss_pred hCCchHH-------------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhcccCCC
Q psy4821 113 LGGYEVN-------------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSVRFSN 162 (520)
Q Consensus 113 ~~g~~~~-------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~ 162 (520)
..|.++. .+...+++.+ ++..+..+++...+..++.++++.++||.+++.
T Consensus 90 ~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG~~~~~ 169 (461)
T 3ld6_A 90 VFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRS 169 (461)
T ss_dssp HHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCcchhh
Confidence 2333322 1112222222 224556789999999999999999999976643
Q ss_pred C-ChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccc
Q psy4821 163 E-DPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYL 241 (520)
Q Consensus 163 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (520)
. ++....+...+...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 188 (461)
T 3ld6_A 170 QLNEKVAQLYADLDGGFSH------------------------------------------------------------- 188 (461)
T ss_dssp TCCHHHHHHHHHHHTTSSH-------------------------------------------------------------
T ss_pred hhhhhhhhhhhhhhhhhhh-------------------------------------------------------------
Confidence 2 22222222111110000
Q ss_pred cchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHH
Q psy4821 242 PGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKA 321 (520)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~ 321 (520)
....+|. +++.. ...+..++.+.+.+++.+.+++++... +...|+++.+++...++
T Consensus 189 ------------------~~~~~~~--~~~~~--~~~~~~~~~~~l~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~ 244 (461)
T 3ld6_A 189 ------------------AAWLLPG--WLPLP--SFRRRDRAHREIKDIFYKAIQKRRQSQ--EKIDDILQTLLDATYKD 244 (461)
T ss_dssp ------------------HHHHSCT--TSCCH--HHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCSHHHHHHTCBCTT
T ss_pred ------------------HHHhhhh--hccCc--HHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcchhhhhHHhhhcc
Confidence 0022332 23333 566777888889999999998887653 34578999998654321
Q ss_pred hhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH------------------
Q psy4821 322 KMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------------------ 383 (520)
Q Consensus 322 ~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------------------ 383 (520)
+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++++
T Consensus 245 ------~~~l----s~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpy 314 (461)
T 3ld6_A 245 ------GRPL----TDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNL 314 (461)
T ss_dssp ------SCBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHH
T ss_pred ------cCCC----CHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhh
Confidence 1246 999999999999999999999999999999999999999999999986
Q ss_pred --hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccc
Q psy4821 384 --ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLP 461 (520)
Q Consensus 384 --a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~ 461 (520)
|||+|+||++|+++. ..|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++...++..|+|
T Consensus 315 l~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~p 393 (461)
T 3ld6_A 315 LDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVP 393 (461)
T ss_dssp HHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCT
T ss_pred hhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCcccc
Confidence 899999999999997 78999999999999999999999999999999999999999999999998766667788999
Q ss_pred cCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCC
Q psy4821 462 FGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKD 518 (520)
Q Consensus 462 FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 518 (520)
||+|+|.|||++||.+|++++++.||++|+|+++++.. |... ..+++..|+..+|
T Consensus 394 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~-~~~~-~~~~~~~p~~~~v 448 (461)
T 3ld6_A 394 FGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF-PTVN-YTTMIHTPENPVI 448 (461)
T ss_dssp TCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC-CCBC-CSSSSCCBSSCEE
T ss_pred CCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCC-Cccc-ccceEEcCCceEE
Confidence 99999999999999999999999999999999987643 3333 3455666766544
No 14
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=5.4e-61 Score=506.57 Aligned_cols=382 Identities=19% Similarity=0.289 Sum_probs=290.9
Q ss_pred HhcCCCCCCCCCcccccccccccCCc----hHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcc
Q psy4821 32 YIKKVRSLPPGPWGLPIIGYLPFLKG----DAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHT 107 (520)
Q Consensus 32 ~~~~~~~~ppgP~~~p~lG~~~~l~~----~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~ 107 (520)
+.+++.+.||||+++|++||++++.. +++..+.+|+++|||||++++|+.++++++||++++++++++.|++++..
T Consensus 39 ~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~~~~~r~~~ 118 (503)
T 3s79_A 39 WNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGS 118 (503)
T ss_dssp ------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSGGGCCCCCC
T ss_pred HHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcCCCCCcchh
Confidence 34456689999999999999988743 34568899999999999999999999999999999999987677777643
Q ss_pred hhh-hhh--CCchHH-------------------------HHHHHHHHHH-----HH----hCCCCCChhHHHHHHHHHH
Q psy4821 108 ELS-SIL--GGYEVN-------------------------VFLKSLQAQA-----EL----CGATGVDVNPLLATSISNV 150 (520)
Q Consensus 108 ~~~-~~~--~g~~~~-------------------------~~~~~~~~~~-----~l----~~~~~~~l~~~~~~~~~~~ 150 (520)
... ... .|.++. ++...+++.+ ++ ..++.+|+...+..++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v 198 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT 198 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence 322 111 122221 1111111111 12 2356799999999999999
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhh
Q psy4821 151 ICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMA 230 (520)
Q Consensus 151 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (520)
++..+||.+++. . ++.+.+.+.++.+...
T Consensus 199 i~~~~fG~~~~~--~---~~~~~~~~~~~~~~~~---------------------------------------------- 227 (503)
T 3s79_A 199 SNTLFLRIPLDE--S---AIVVKIQGYFDAWQAL---------------------------------------------- 227 (503)
T ss_dssp HHHHHTCCCCCH--H---HHHHHHHHHHHHHHHH----------------------------------------------
T ss_pred HHHHHcCcccCc--h---hHHHHHHHHHHHHHHH----------------------------------------------
Confidence 999999987751 1 2222222222111100
Q ss_pred hhccccccccccchhHHHHHHHHHHhhhhhhcccc-cccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC----
Q psy4821 231 VVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLP-FVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDAS---- 305 (520)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---- 305 (520)
...| ++..++. ..++..++.+.+.+++.+.++++++....+
T Consensus 228 -------------------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (503)
T 3s79_A 228 -------------------------------LIKPDIFFKISW---LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLE 273 (503)
T ss_dssp -------------------------------TTCCHHHHHSGG---GTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred -------------------------------hcCcHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 0001 0011111 234566777888888888888877654322
Q ss_pred CcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH--
Q psy4821 306 NIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-- 383 (520)
Q Consensus 306 ~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-- 383 (520)
...|+++.+++...+. .+ +++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++
T Consensus 274 ~~~d~l~~ll~~~~~~--------~l----~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~ 341 (503)
T 3s79_A 274 ECMDFATELILAEKRG--------DL----TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG 341 (503)
T ss_dssp TTCCHHHHHHHHHHTT--------SS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhcccC--------CC----CHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 2348999999764321 26 999999999999999999999999999999999999999999999975
Q ss_pred ----------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccC
Q psy4821 384 ----------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFL 447 (520)
Q Consensus 384 ----------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl 447 (520)
|||+|+||++|+++. ..|.+.+|++++||.|||||.|+++.+++||| ++|+||++|+||||+
T Consensus 342 ~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~ 419 (503)
T 3s79_A 342 ERDIKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFA 419 (503)
T ss_dssp TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCC-EEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGS
T ss_pred CCCCCHHHHhcCHHHHHHHHhhhccCCCccc-ccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcC
Confidence 999999999999998 57999999999999999999999999999999 999999999999999
Q ss_pred CCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCC
Q psy4821 448 TPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSH 516 (520)
Q Consensus 448 ~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~ 516 (520)
+.. ....|+|||+|+|.|||++||.+|++++++.||++|+|+++++.+.++.....|++..|.+.
T Consensus 420 ~~~----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~ 484 (503)
T 3s79_A 420 KNV----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDET 484 (503)
T ss_dssp SCC----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTT
T ss_pred CCC----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCc
Confidence 742 44679999999999999999999999999999999999998876655565566888888763
No 15
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=1.8e-60 Score=498.02 Aligned_cols=384 Identities=19% Similarity=0.290 Sum_probs=284.5
Q ss_pred CCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccc-cCCCcchhhhhhCC
Q psy4821 37 RSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEF-SGRPHTELSSILGG 115 (520)
Q Consensus 37 ~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~-~~r~~~~~~~~~~g 115 (520)
+.+||||+++|++||++.+.++++.++.++++ |||||++++|+.++++++||+++++++.++.| .+++.........|
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~~~~~~~~~~~~~~~~~g 100 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLWESLEGLLG 100 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCTTC---------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCcCcccccchHHHHHHhcC
Confidence 67899999999999999988899999999988 99999999999999999999999999988755 33322222222222
Q ss_pred -chHH------------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhcccCCCCCh
Q psy4821 116 -YEVN------------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDP 165 (520)
Q Consensus 116 -~~~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~ 165 (520)
.++. .+...+++.+ ++..++.+|+...+..++.++++.++||.+++. .
T Consensus 101 ~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g~~~~~--~ 178 (467)
T 3dbg_A 101 KEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMD--E 178 (467)
T ss_dssp ---------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSCSSCCH--H
T ss_pred CCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhCCcccc--h
Confidence 2322 1123333333 235577899999999999999999999987763 2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchh
Q psy4821 166 QFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLR 245 (520)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (520)
....+.+.+......+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 196 (467)
T 3dbg_A 179 RAERLCVALATVFRGMYR-------------------------------------------------------------- 196 (467)
T ss_dssp HHHHHHHHHHHHHHC-----------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHH--------------------------------------------------------------
Confidence 222333332222111000
Q ss_pred HHHHHHHHHHhhhhhhcccc--cccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhh
Q psy4821 246 ETRKTLSKLFETMAVVNFLP--FVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKM 323 (520)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~P--~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 323 (520)
...+| ++.+++.. ..++..++.+.+.+++.+.++++++.. +...|+++.+++...+++
T Consensus 197 ---------------~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~dll~~ll~~~~~~~- 256 (467)
T 3dbg_A 197 ---------------RMVVPLGPLYRLPLP--ANRRFNDALADLHLLVDEIIAERRASG--QKPDDLLTALLEAKDDNG- 256 (467)
T ss_dssp --------------------------------------CCHHHHHHHHHHHHHHHTTCC--SSCCSHHHHHTTC------
T ss_pred ---------------HhccchhhhhhCCCh--HhHHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHhhccCCC-
Confidence 02233 23344433 455667778888899999898887642 345799999997654321
Q ss_pred cccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH------------------hH
Q psy4821 324 ENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------------------AT 385 (520)
Q Consensus 324 ~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~------------------a~ 385 (520)
..+ +++++.+++.++++||+|||+++++|++++|++||++|++||+|++++ +|
T Consensus 257 -----~~l----s~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~l~~l~yl~a~ 327 (467)
T 3dbg_A 257 -----DPI----GEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNV 327 (467)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCCHHHHTTCHHHHHH
T ss_pred -----CCC----CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHHHHhhCHHHHHH
Confidence 136 999999999999999999999999999999999999999999999875 89
Q ss_pred HHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCC
Q psy4821 386 ILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465 (520)
Q Consensus 386 i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G 465 (520)
|+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++.....+..|+|||+|
T Consensus 328 i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~FG~G 406 (467)
T 3dbg_A 328 IVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAG 406 (467)
T ss_dssp HHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSSCSS
T ss_pred HHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCCCCC
Confidence 9999999999987 899999999999999999999999999999999999999999999999755444456789999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCC
Q psy4821 466 RRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKD 518 (520)
Q Consensus 466 ~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 518 (520)
+|.|+|++||.+|++++++.||++|+|++.++.+ .....+++++|+.+++
T Consensus 407 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~p~~l~~ 456 (467)
T 3dbg_A 407 KRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN---DAVRVGITLRPHDLLV 456 (467)
T ss_dssp SSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE---EEEEESSSEEEEECEE
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC---CccceeeEecCCCCcc
Confidence 9999999999999999999999999999987643 2233466777776653
No 16
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=7.5e-59 Score=484.09 Aligned_cols=364 Identities=20% Similarity=0.292 Sum_probs=280.4
Q ss_pred CCCCC-CcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhhhhhC
Q psy4821 38 SLPPG-PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELSSILG 114 (520)
Q Consensus 38 ~~ppg-P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~~~~~ 114 (520)
+.||| |+++|++||++.+..+++..+.+|+++|||||++++|+.++++++||+++++++.++ .|++++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 57887 889999999998877899999999999999999999999999999999999999864 666665432222111
Q ss_pred CchHH-----------------------HHHHHHHHHH-HH----hCCCCCChhHHHHHHHHHHHHHHHhcccCCCC-Ch
Q psy4821 115 GYEVN-----------------------VFLKSLQAQA-EL----CGATGVDVNPLLATSISNVICSIVMSVRFSNE-DP 165 (520)
Q Consensus 115 g~~~~-----------------------~~~~~~~~~~-~l----~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~-~~ 165 (520)
|.++. .+...+++.+ ++ ..++.+|+...+..++.++++..+||.+++.. ++
T Consensus 84 g~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~ 163 (455)
T 2cib_A 84 GEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDG 163 (455)
T ss_dssp C--------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHTTCCH
T ss_pred CCccccCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCCcchhhhH
Confidence 22221 1112222222 12 33456899999999999999999999887542 22
Q ss_pred HHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchh
Q psy4821 166 QFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLR 245 (520)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (520)
. +.+.+........ .
T Consensus 164 ~---~~~~~~~~~~~~~---~----------------------------------------------------------- 178 (455)
T 2cib_A 164 R---FAKLYHELERGTD---P----------------------------------------------------------- 178 (455)
T ss_dssp H---HHHHHHHHHTTCC---G-----------------------------------------------------------
T ss_pred H---HHHHHHHHHhhhh---H-----------------------------------------------------------
Confidence 2 2222221110000 0
Q ss_pred HHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cchhHHHHHHHHHHHhhc
Q psy4821 246 ETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASN-IRDMLDSYLFEIEKAKME 324 (520)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~d~l~~ll~~~~~~~~~ 324 (520)
....+|+ ++.. ..++..++...+.+++.+.++++++...... ..|+++.+++...+
T Consensus 179 --------------~~~~~p~---l~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~~~---- 235 (455)
T 2cib_A 179 --------------LAYVDPY---LPIE--SFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE---- 235 (455)
T ss_dssp --------------GGGTCTT---CSCH--HHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHCBCT----
T ss_pred --------------HHHhccc---CCCh--hHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHhhhh----
Confidence 0034453 2322 3456667778888999999988876543221 23999999864321
Q ss_pred cccccc-ccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-------------------h
Q psy4821 325 NRSDQL-FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------------------A 384 (520)
Q Consensus 325 ~~~~~~-l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-------------------a 384 (520)
.+.. + +++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++ |
T Consensus 236 --~~~~~l----~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a 309 (455)
T 2cib_A 236 --TGTPRF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309 (455)
T ss_dssp --TSSBSC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHH
T ss_pred --cCCCCC----CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHH
Confidence 1112 6 999999999999999999999999999999999999999999999754 9
Q ss_pred HHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCc-cCCCcccccC
Q psy4821 385 TILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV-TKPEFFLPFG 463 (520)
Q Consensus 385 ~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-~~~~~~~~FG 463 (520)
||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++... ..+..|+|||
T Consensus 310 ~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG 388 (455)
T 2cib_A 310 VLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFG 388 (455)
T ss_dssp HHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTC
T ss_pred HHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCC
Confidence 99999999999886 799999999999999999999999999999999999999999999999765332 2366899999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhcceecCC
Q psy4821 464 VGRRMCLGDVLARMELFLFFSTLMHTFGIESPP 496 (520)
Q Consensus 464 ~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~ 496 (520)
+|+|.|+|++||.+|++++++.||++|+|+++.
T Consensus 389 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~ 421 (455)
T 2cib_A 389 AGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQ 421 (455)
T ss_dssp CGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCC
Confidence 999999999999999999999999999999863
No 17
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=4.4e-59 Score=484.32 Aligned_cols=367 Identities=24% Similarity=0.348 Sum_probs=279.3
Q ss_pred HHHhcCCCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcc
Q psy4821 30 MLYIKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHT 107 (520)
Q Consensus 30 ~~~~~~~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~ 107 (520)
|++..++.+.||||+++|++||++.+..+++ ++.+++++|||||++++++.++++++||+++++++.++ .|+.+...
T Consensus 4 yp~~~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~ 82 (444)
T 2ve3_A 4 SPTNLNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL 82 (444)
T ss_dssp -----CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH
T ss_pred CCCCCCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH
Confidence 5556677889999999999999988755677 88899999999999999899999999999999999876 35532211
Q ss_pred hhhhhhCCchHH------------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhcc
Q psy4821 108 ELSSILGGYEVN------------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSV 158 (520)
Q Consensus 108 ~~~~~~~g~~~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~ 158 (520)
.....++..++. .+...+++.+ ++..++.+|+.+.+..+++++++.++||
T Consensus 83 ~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~fG- 161 (444)
T 2ve3_A 83 STRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG- 161 (444)
T ss_dssp HHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHcC-
Confidence 111111111222 1112222222 2345668999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhcccccc
Q psy4821 159 RFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFV 238 (520)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (520)
.....+. ++.+.+......
T Consensus 162 ~~~~~~~---~~~~~~~~~~~~---------------------------------------------------------- 180 (444)
T 2ve3_A 162 EKVSQNP---QLFPWFETYIQG---------------------------------------------------------- 180 (444)
T ss_dssp HHHHSCT---THHHHHHHHHHH----------------------------------------------------------
T ss_pred CCcccHH---HHHHHHHHHHHH----------------------------------------------------------
Confidence 2211111 111111111000
Q ss_pred ccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHH
Q psy4821 239 KYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEI 318 (520)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~ 318 (520)
. ..+|. .+|.. .+++..++.+.+.+++.+.++++++.. ....|+++.+++..
T Consensus 181 -------------------~---~~~~~--~~p~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~ 232 (444)
T 2ve3_A 181 -------------------L---FSLPI--PLPNT--LFGKSQRARALLLAELEKIIKARQQQP--PSEEDALGILLAAR 232 (444)
T ss_dssp -------------------H---SSCCC--CSTTS--HHHHHHHHHHHHHHHHHHHHHHHHTSC--CCCSSHHHHHHHCB
T ss_pred -------------------H---hcCCc--cCCCc--HHHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCHHHHHHhcc
Confidence 0 01121 12332 345667778888999999998887652 24578999998643
Q ss_pred HHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH---------------
Q psy4821 319 EKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV--------------- 383 (520)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~--------------- 383 (520)
.+ .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++.+
T Consensus 233 ~~------~~~~l----~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~l~~lp 302 (444)
T 2ve3_A 233 DD------NNQPL----SLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMP 302 (444)
T ss_dssp CT------TSCBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSSCCCHHHHTTCH
T ss_pred cc------CCCCC----CHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCChhhhhcCh
Confidence 21 11136 999999999999999999999999999999999999999999999874
Q ss_pred ---hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCC-CccCCCcc
Q psy4821 384 ---ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEG-KVTKPEFF 459 (520)
Q Consensus 384 ---a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~-~~~~~~~~ 459 (520)
+||+|+||++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. ....+..|
T Consensus 303 yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~ 381 (444)
T 2ve3_A 303 YLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAH 381 (444)
T ss_dssp HHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSC
T ss_pred HHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCcee
Confidence 999999999999997 6899999999999999999999999999999999999999999999997653 22345679
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCC
Q psy4821 460 LPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQ 498 (520)
Q Consensus 460 ~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~ 498 (520)
+|||+|+|.|+|++||.+|++++++.||++|++++.++.
T Consensus 382 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 420 (444)
T 2ve3_A 382 VPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ 420 (444)
T ss_dssp CTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC
T ss_pred eCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC
Confidence 999999999999999999999999999999999987654
No 18
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=2.4e-58 Score=484.39 Aligned_cols=385 Identities=22% Similarity=0.255 Sum_probs=285.6
Q ss_pred hcCCCCCCCCCcccccccccccC-----CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCc
Q psy4821 33 IKKVRSLPPGPWGLPIIGYLPFL-----KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPH 106 (520)
Q Consensus 33 ~~~~~~~ppgP~~~p~lG~~~~l-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~ 106 (520)
..++.+.+|||+++|+. |++.+ .++++..+.+|+++|||||++++|+.++|+++||+++++|+.+. .|++++.
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~f~~r~~ 82 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFL 82 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCCSSCCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCCCCCCCCC
Confidence 34566789999988865 66655 24789999999999999999999999999999999999999887 7877765
Q ss_pred chhh---hhh--CCchHH-----------HH--------------HHHHHHHH-----HHh--------CCCCCChhHHH
Q psy4821 107 TELS---SIL--GGYEVN-----------VF--------------LKSLQAQA-----ELC--------GATGVDVNPLL 143 (520)
Q Consensus 107 ~~~~---~~~--~g~~~~-----------~~--------------~~~~~~~~-----~l~--------~~~~~~l~~~~ 143 (520)
.... ... .+.++. +. ...+++.+ .+. +++.+|+...+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~ 162 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 162 (487)
T ss_dssp CHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHH
T ss_pred CcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHH
Confidence 4321 111 223332 11 11112211 111 24569999999
Q ss_pred HHHHHHHHHHHHhcccCCCCC----hHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCC
Q psy4821 144 ATSISNVICSIVMSVRFSNED----PQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQP 219 (520)
Q Consensus 144 ~~~~~~~i~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (520)
..+++++++.++||.+++..+ .....+.+.+........
T Consensus 163 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 205 (487)
T 3n9y_A 163 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSV------------------------------------- 205 (487)
T ss_dssp HHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHG-------------------------------------
T ss_pred HHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHH-------------------------------------
Confidence 999999999999999987532 233334443333221110
Q ss_pred CCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhccccc--ccccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4821 220 NEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPF--VKYLPGLRETRKTLSKNRVEMGAYFQEKINE 297 (520)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (520)
....+|. +++++.. .+++..+..+.+.+++.+.+++
T Consensus 206 ----------------------------------------~~~~~p~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 243 (487)
T 3n9y_A 206 ----------------------------------------PMLNLPPDLFRLFRTK--TWKDHVAAWDVIFSKADIYTQN 243 (487)
T ss_dssp ----------------------------------------GGTTSCHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------HHHhcCHHHHhhcccH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 0023331 2333322 3444455555555555555544
Q ss_pred hhh----hcC-CCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhH
Q psy4821 298 HRT----TFD-ASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAV 372 (520)
Q Consensus 298 ~~~----~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v 372 (520)
+.+ ... .....|+++.+++. . .+ +++++.+++.++++||+|||+++++|++++|++||++
T Consensus 244 ~~~~~~~~~~~~~~~~d~l~~ll~~---------~--~l----~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~ 308 (487)
T 3n9y_A 244 FYWELRQKGSVHHDYRGILYRLLGD---------S--KM----SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKV 308 (487)
T ss_dssp HHHHHHHHCCCCSSCCCHHHHHHHS---------C--SS----CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHhcCCcccchHHHHHHHHhc---------C--CC----CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHH
Confidence 332 211 12346888888742 0 26 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhH-------------------hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCC
Q psy4821 373 AKAVQDELDTV-------------------ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPE 433 (520)
Q Consensus 373 ~~klr~Ei~~~-------------------a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~ 433 (520)
|+||++||+++ |||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||+
T Consensus 309 ~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~ 387 (487)
T 3n9y_A 309 QDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 387 (487)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTT
T ss_pred HHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcc
Confidence 99999999965 899999999999986 8999999999999999999999999999999999
Q ss_pred CCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecC
Q psy4821 434 LWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITP 513 (520)
Q Consensus 434 ~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p 513 (520)
+|+||++|+||||++.+.. ..+..++|||.|+|.|+|++||.+|++++++.||++|+|++.++.+ +....++++.|
T Consensus 388 ~~~dp~~F~PeR~l~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~p 463 (487)
T 3n9y_A 388 FFFDPENFDPTRWLSKDKN-ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSD---VGTTFNLILMP 463 (487)
T ss_dssp TSSSTTSCCGGGGTCSCTT-SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCC---CCEEESSSEEE
T ss_pred cCCCcccCChhhcCCCCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcc---cccceeeeecC
Confidence 9999999999999985532 3467899999999999999999999999999999999999876633 22233445555
Q ss_pred C-CCC
Q psy4821 514 D-SHK 517 (520)
Q Consensus 514 ~-~~~ 517 (520)
+ +++
T Consensus 464 ~~~~~ 468 (487)
T 3n9y_A 464 EKPIS 468 (487)
T ss_dssp SSCCC
T ss_pred CCCce
Confidence 3 443
No 19
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=3.9e-59 Score=487.07 Aligned_cols=374 Identities=18% Similarity=0.267 Sum_probs=286.3
Q ss_pred cCCCCCCCC-CcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchh-
Q psy4821 34 KKVRSLPPG-PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTEL- 109 (520)
Q Consensus 34 ~~~~~~ppg-P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~- 109 (520)
.++.+.||| |+++|++||++.+.++++.++.+|+++|||||++++|++++++++||+++++++.++ .+..++....
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 455688999 999999999999888899999999999999999999999999999999999999875 3433222111
Q ss_pred hhhhCCchHH-------------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhccc
Q psy4821 110 SSILGGYEVN-------------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSVR 159 (520)
Q Consensus 110 ~~~~~g~~~~-------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~~ 159 (520)
...+.|.++. .+...+++.+ ++..+..+|+...+...+.++++.++||.+
T Consensus 87 ~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~~~G~~ 166 (461)
T 3i3k_A 87 TTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKE 166 (461)
T ss_dssp HHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred hhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHHHccHh
Confidence 1111222221 1112222222 223445579999999999999999999965
Q ss_pred CCCC-ChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhcccccc
Q psy4821 160 FSNE-DPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFV 238 (520)
Q Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (520)
+... ++.+... .........
T Consensus 167 ~~~~~~~~~~~~---~~~~~~~~~-------------------------------------------------------- 187 (461)
T 3i3k_A 167 IRSQLNEKVAQL---YADLDGGFS-------------------------------------------------------- 187 (461)
T ss_dssp HHHTCCHHHHHH---HHHHHTTSS--------------------------------------------------------
T ss_pred hhhHHHHHHHHH---HHHHHhccc--------------------------------------------------------
Confidence 4322 1111111 111000000
Q ss_pred ccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHH
Q psy4821 239 KYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEI 318 (520)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~ 318 (520)
.....+| .+++.. ..++..++.+.+.+++.+.++++++.. +...|+++.+++..
T Consensus 188 --------------------~~~~~~P--~~l~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~d~l~~ll~~~ 241 (461)
T 3i3k_A 188 --------------------HAAWLLP--GWLPLP--SFRRRDRAHREIKDIFYKAIQKRRQSQ--EKIDDILQTLLDAT 241 (461)
T ss_dssp --------------------HHHHHSC--TTSCCH--HHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCSHHHHHHTCB
T ss_pred --------------------cchhhcc--cccCCH--HHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccHHHHHHHhh
Confidence 0002234 233333 566777888889999999998887653 34578999998653
Q ss_pred HHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH---------------
Q psy4821 319 EKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV--------------- 383 (520)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~--------------- 383 (520)
.++ +..+ +++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++
T Consensus 242 ~~~------~~~l----~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~ 311 (461)
T 3i3k_A 242 YKD------GRPL----TDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKD 311 (461)
T ss_dssp CTT------SCBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHT
T ss_pred hcc------CCCC----CHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhc
Confidence 221 1136 999999999999999999999999999999999999999999999875
Q ss_pred -----hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCc
Q psy4821 384 -----ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF 458 (520)
Q Consensus 384 -----a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~ 458 (520)
+||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.++....+..
T Consensus 312 l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~ 390 (461)
T 3i3k_A 312 LNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFA 390 (461)
T ss_dssp CHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSS
T ss_pred ChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcc
Confidence 999999999999976 89999999999999999999999999999999999999999999999986654445678
Q ss_pred ccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCC
Q psy4821 459 FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLK 504 (520)
Q Consensus 459 ~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~ 504 (520)
|+|||+|+|.|||++||.+|++++++.||++|+|+++++.. |...
T Consensus 391 ~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~ 435 (461)
T 3i3k_A 391 YVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF-PTVN 435 (461)
T ss_dssp SCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC-CCBC
T ss_pred eeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCC-CCcc
Confidence 99999999999999999999999999999999999987643 4443
No 20
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=9.8e-59 Score=482.16 Aligned_cols=380 Identities=18% Similarity=0.268 Sum_probs=295.4
Q ss_pred CCCCCCCcc-cccccccccCCchHHHHHHHHHhhcC-CeeEEEecCeeEEEecCHHHHHHHHhhc--cccCCCcchhhhh
Q psy4821 37 RSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYG-SIFSTKLGDQLIVVLSDYRHIREAFRKE--EFSGRPHTELSSI 112 (520)
Q Consensus 37 ~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvi~dp~~i~~i~~~~--~~~~r~~~~~~~~ 112 (520)
++.||||++ +|++||++.+.++++.++.+|+++|| +||++++|++++++++||+++++++.++ .|++++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467888665 99999999988889999999999999 9999999999999999999999999886 5666665443333
Q ss_pred hCCchHH-------------------------HHHHHHHHHH----H-H-h-CCCCCChhHHHHHHHHHHHHHHHhcccC
Q psy4821 113 LGGYEVN-------------------------VFLKSLQAQA----E-L-C-GATGVDVNPLLATSISNVICSIVMSVRF 160 (520)
Q Consensus 113 ~~g~~~~-------------------------~~~~~~~~~~----~-l-~-~~~~~~l~~~~~~~~~~~i~~~~fg~~~ 160 (520)
+.|.++. .+...+++.+ + . . .++.+|+...+..++.++++.++||.++
T Consensus 82 ~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~ 161 (450)
T 3gw9_A 82 VFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDL 161 (450)
T ss_dssp HHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHHHcCcch
Confidence 2232221 1112222222 1 1 2 4567899999999999999999999765
Q ss_pred CCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhcccccccc
Q psy4821 161 SNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKY 240 (520)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (520)
+...+ ...+.+.+.......
T Consensus 162 ~~~~~-~~~~~~~~~~~~~~~----------------------------------------------------------- 181 (450)
T 3gw9_A 162 RKRLD-ARRFAQLLAKMESSL----------------------------------------------------------- 181 (450)
T ss_dssp HHHSC-HHHHHHHHHHHHHTC-----------------------------------------------------------
T ss_pred hhhhh-hHHHHHHHHHHHhcc-----------------------------------------------------------
Confidence 43111 122222222111000
Q ss_pred ccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCCcchhHHHHHHHH
Q psy4821 241 LPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTF--DASNIRDMLDSYLFEI 318 (520)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~d~l~~ll~~~ 318 (520)
.....++|+++++|.. ..++..++.+.+.+++.+.++++++.. ......|+++.+++..
T Consensus 182 -----------------~~~~~~~P~l~~lp~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~ 242 (450)
T 3gw9_A 182 -----------------IPAAVFLPILLKLPLP--QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAV 242 (450)
T ss_dssp -----------------CGGGGTCGGGGGSCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSHHHHHHHCB
T ss_pred -----------------ccchhcccchhccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchHHHHHHHhh
Confidence 0011567888888765 567778888999999999998877542 2234579999998753
Q ss_pred HHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH--hChhHHHHHHHHHHhH-------------
Q psy4821 319 EKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMM--HYPAVAKAVQDELDTV------------- 383 (520)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~--~~P~v~~klr~Ei~~~------------- 383 (520)
.+ .+..+ +++++.++++++++||+|||+++++|++++|+ +||++|+++|+|++++
T Consensus 243 ~~------~~~~l----~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~l 312 (450)
T 3gw9_A 243 YR------DGTPM----SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEM 312 (450)
T ss_dssp CT------TSCBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTCCSSCCHHHHHHHC
T ss_pred cc------CCCCC----CHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhccCCCChHHHHHhc
Confidence 22 11136 99999999999999999999999999999999 9999999999999641
Q ss_pred ----hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcc
Q psy4821 384 ----ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFF 459 (520)
Q Consensus 384 ----a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~ 459 (520)
|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||+. ..+..|
T Consensus 313 pyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~------~~~~~~ 385 (450)
T 3gw9_A 313 PFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE------KVEGAF 385 (450)
T ss_dssp HHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------SSTTCC
T ss_pred HHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc------CCCCce
Confidence 999999999999987 789999999999999999999999999999999999999999999932 135689
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCC
Q psy4821 460 LPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPD 514 (520)
Q Consensus 460 ~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~ 514 (520)
+|||+|+|.|||++||.+|++++++.||++|+|+++++.. |+... .+++..|+
T Consensus 386 ~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~-~~~~~~p~ 438 (450)
T 3gw9_A 386 IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV-PDPDY-HTMVVGPT 438 (450)
T ss_dssp CTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSC-CCEET-TSSSCEEC
T ss_pred eCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCC-CCCcc-ccceecCC
Confidence 9999999999999999999999999999999999975432 33332 23455555
No 21
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=3.3e-57 Score=473.64 Aligned_cols=386 Identities=18% Similarity=0.282 Sum_probs=283.9
Q ss_pred CCCCCCcccccccccccC-CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcchh--hh---
Q psy4821 38 SLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTEL--SS--- 111 (520)
Q Consensus 38 ~~ppgP~~~p~lG~~~~l-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~--~~--- 111 (520)
+.||||+++|++||++.+ .++++..+.+|+++|||||++++|+.++++++||+++++++.+..|.+.+.... ..
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~~f~~~~~~~~~~~~~~~ 82 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA 82 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhcCcCcCchhHHHHHHHhc
Confidence 568999999999999988 457899999999999999999999999999999999999997655533221100 00
Q ss_pred ---hh-C---CchHH----------------HHHHHHHHHH-----HHh---CCCCCChhHHHHHHHHHHHHHHHhcccC
Q psy4821 112 ---IL-G---GYEVN----------------VFLKSLQAQA-----ELC---GATGVDVNPLLATSISNVICSIVMSVRF 160 (520)
Q Consensus 112 ---~~-~---g~~~~----------------~~~~~~~~~~-----~l~---~~~~~~l~~~~~~~~~~~i~~~~fg~~~ 160 (520)
.+ . |.... .+...+++.+ .+. .++.+|+...+..+++++++.++||.++
T Consensus 83 ~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 162 (470)
T 2ij2_A 83 GDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRF 162 (470)
T ss_dssp TTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHcCCcc
Confidence 11 1 11110 1112222222 222 2457899999999999999999999987
Q ss_pred CCC-ChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccc
Q psy4821 161 SNE-DPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVK 239 (520)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (520)
+.. +++...+.+.+.+.+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------- 187 (470)
T 2ij2_A 163 NSFYRDQPHPFITSMVRALDEAMNK------------------------------------------------------- 187 (470)
T ss_dssp CGGGCSSCCHHHHHHHHHHHHHHHT-------------------------------------------------------
T ss_pred cccccCCCCHHHHHHHHHHHHHHHH-------------------------------------------------------
Confidence 642 111122222222221110000
Q ss_pred cccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHH
Q psy4821 240 YLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIE 319 (520)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~ 319 (520)
....|++.+++.. ..++..+....+.+++.+.++++++.. +...|+++.+++...
T Consensus 188 ---------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~dll~~ll~~~~ 242 (470)
T 2ij2_A 188 ---------------------LQRANPDDPAYDE--NKRQFQEDIKVMNDLVDKIIADRKASG--EQSDDLLTHMLNGKD 242 (470)
T ss_dssp ---------------------C---CTTSGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCSSHHHHHHHCCC
T ss_pred ---------------------HhhhhhHhhccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc--cCchhHHHHHHhccC
Confidence 0111233333322 455566777888889999898887653 234699999986432
Q ss_pred HHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH----------------
Q psy4821 320 KAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV---------------- 383 (520)
Q Consensus 320 ~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~---------------- 383 (520)
+ ..+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++++
T Consensus 243 ~-----~~~~~l----s~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~lpy 313 (470)
T 2ij2_A 243 P-----ETGEPL----DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313 (470)
T ss_dssp T-----TTCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSSCCHHHHHTCHH
T ss_pred c-----ccCCCC----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHhCCHH
Confidence 1 011236 999999999999999999999999999999999999999999999863
Q ss_pred --hHHHhhhccccCccccceeeccccceecC-eeeCCCCEEEecccccccCCCCC-CCCCCccCCccCCCCCCccCCCcc
Q psy4821 384 --ATILETLRRSSVVALGTIHAVTRDVKFNG-FTIPKNTQIVPLLHAVHMDPELW-ESPEDFRPTRFLTPEGKVTKPEFF 459 (520)
Q Consensus 384 --a~i~E~lRl~p~~~~~~~R~~~~d~~l~g-~~iP~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~ 459 (520)
+||+|+||++|+++. .+|.+.+|++++| |.|||||.|+++.+++||||++| +||++|+|||| + +....++..|
T Consensus 314 l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~-~~~~~~~~~~ 390 (470)
T 2ij2_A 314 VGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-E-NPSAIPQHAF 390 (470)
T ss_dssp HHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-S-SGGGSCTTSC
T ss_pred HHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-C-CCCcCCCccc
Confidence 999999999999997 7899999999999 99999999999999999999999 99999999999 3 2222245788
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCCCCCCCCCCceeecCCCCCC
Q psy4821 460 LPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKD 518 (520)
Q Consensus 460 ~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 518 (520)
+|||+|+|.|+|++||.+|++++++.||++|+|+ .+++. ++....+++..|.+++|
T Consensus 391 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~--~~~~~~~~~~~p~~~~v 446 (470)
T 2ij2_A 391 KPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNY--ELDIKETLTLKPEGFVV 446 (470)
T ss_dssp CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCC--CCCEEESSSEEETTCEE
T ss_pred cCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCC--ccccccceEecCCCeEE
Confidence 9999999999999999999999999999999999 32221 23333445566665544
No 22
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.7e-55 Score=458.90 Aligned_cols=350 Identities=18% Similarity=0.275 Sum_probs=266.0
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcchh-hh-----hhCCchHH----------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTEL-SS-----ILGGYEVN---------- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~-~~-----~~~g~~~~---------- 119 (520)
++.++..+.+|+++|||||++++|+.++|+++||+++++++.+..|.+++.... .. .+.|.++.
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~ 88 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHK 88 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHHHH
Confidence 456899999999999999999999999999999999999997655554442211 00 01122211
Q ss_pred ---------------HHHHHHHHHH-----HH----hCCCCCChhHHHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHH
Q psy4821 120 ---------------VFLKSLQAQA-----EL----CGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLID 175 (520)
Q Consensus 120 ---------------~~~~~~~~~~-----~l----~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~ 175 (520)
.+...+++.+ .+ .+++.+|+...+..++.++++.++||.+++..+.....+.+.+.
T Consensus 89 ~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~ 168 (456)
T 3mdm_A 89 QRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVK 168 (456)
T ss_dssp HHHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHH
T ss_pred HHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHH
Confidence 1112222222 12 24568999999999999999999999988753221122222222
Q ss_pred HHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHH
Q psy4821 176 EGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLF 255 (520)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (520)
........
T Consensus 169 ~~~~~~~~------------------------------------------------------------------------ 176 (456)
T 3mdm_A 169 LMLEGITA------------------------------------------------------------------------ 176 (456)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 21111000
Q ss_pred hhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--CCcchhHHHHHHHHHHHhhcccccccccC
Q psy4821 256 ETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDA--SNIRDMLDSYLFEIEKAKMENRSDQLFNG 333 (520)
Q Consensus 256 ~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~l~~ 333 (520)
...|++.++|......+...+..+.+.+++.+.++++++.... ....|+++.+++... ..+
T Consensus 177 ------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~---------~~~-- 239 (456)
T 3mdm_A 177 ------SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEE---------GAQ-- 239 (456)
T ss_dssp ------HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTS---------SCS--
T ss_pred ------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcC---------CCC--
Confidence 0112233344322234455666677778888888877664322 234699999986521 025
Q ss_pred CCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-------------------hHHHhhhcccc
Q psy4821 334 KNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSS 394 (520)
Q Consensus 334 ~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-------------------a~i~E~lRl~p 394 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+|||+|++++ |||+|+||++|
T Consensus 240 --~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p 317 (456)
T 3mdm_A 240 --DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYP 317 (456)
T ss_dssp --SSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999999999999999999975 89999999999
Q ss_pred CccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHH
Q psy4821 395 VVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVL 474 (520)
Q Consensus 395 ~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~ 474 (520)
+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++.. .....++|||+|+|.|+|++|
T Consensus 318 ~~~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~--~~~~~~~pFg~G~r~C~G~~l 394 (456)
T 3mdm_A 318 PAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP--KPRFTYFPFSLGHRSCIGQQF 394 (456)
T ss_dssp SSCC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC--CCSSSCCTTCCGGGSCTTHHH
T ss_pred Cccc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC--CCCCcccCCCCCCcCCCCHHH
Confidence 9996 7899999999999999999999999999999999999999999999997642 245679999999999999999
Q ss_pred HHHHHHHHHHHHHhhcceecCCCCC
Q psy4821 475 ARMELFLFFSTLMHTFGIESPPGQP 499 (520)
Q Consensus 475 a~~e~~~~l~~ll~~f~~~~~~~~~ 499 (520)
|.+|++++++.||++|+|+++++.+
T Consensus 395 A~~e~~~~la~ll~~f~~~~~~~~~ 419 (456)
T 3mdm_A 395 AQMEVKVVMAKLLQRLEFRLVPGQR 419 (456)
T ss_dssp HHHHHHHHHHHHHHHEEEEECTTCC
T ss_pred HHHHHHHHHHHHHHhCeEEeCCCCc
Confidence 9999999999999999999987644
No 23
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=1.4e-55 Score=463.78 Aligned_cols=385 Identities=20% Similarity=0.316 Sum_probs=271.3
Q ss_pred HHHhcCCCCCCCCCcc-cccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcc
Q psy4821 30 MLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHT 107 (520)
Q Consensus 30 ~~~~~~~~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~ 107 (520)
+++.++..+.||||++ +|++||++++..+++..+.+|+++||+||++++|++++++++||+++++++.+. .+..++..
T Consensus 5 ~~~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~ 84 (491)
T 3dax_A 5 TSSRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH 84 (491)
T ss_dssp --CCCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHH
T ss_pred hhhhccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHH
Confidence 3445666788999998 899999999877899999999999999999999999999999999999999865 23322211
Q ss_pred h-hhhhhCCch------------HHH-------------HHHHHHHHH-HH-h----------CCCCCChhHHHHHHHHH
Q psy4821 108 E-LSSILGGYE------------VNV-------------FLKSLQAQA-EL-C----------GATGVDVNPLLATSISN 149 (520)
Q Consensus 108 ~-~~~~~~g~~------------~~~-------------~~~~~~~~~-~l-~----------~~~~~~l~~~~~~~~~~ 149 (520)
. ......|.+ ..+ +...+.+.+ ++ . ....+++...+...+++
T Consensus 85 ~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 164 (491)
T 3dax_A 85 FATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164 (491)
T ss_dssp HHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHH
Confidence 1 011010111 111 111111111 11 1 11235677788888888
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhh
Q psy4821 150 VICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETM 229 (520)
Q Consensus 150 ~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (520)
+++...||.+....+..... +.+..+.+..
T Consensus 165 ~~~~~~fG~~~~~~~~~~~~----~~~~~~~~~~---------------------------------------------- 194 (491)
T 3dax_A 165 AGYLTIFGRDLTRRDTQKAH----ILNNLDNFKQ---------------------------------------------- 194 (491)
T ss_dssp HHHHHHHCBCSTTGGGHHHH----HHHHHHHHHH----------------------------------------------
T ss_pred HhHHHHcCcccccccchhhh----hhHHHHHHHH----------------------------------------------
Confidence 88888899876543222111 1111110000
Q ss_pred hhhccccccccccchhHHHHHHHHHHhhhhhhcccccc-cccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcc
Q psy4821 230 AVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFV-KYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIR 308 (520)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 308 (520)
..+.+|++ ..+|.. ..++..+.++.+.+.+. +++.+. .....
T Consensus 195 ------------------------------~~~~~p~l~~~lp~~--~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~ 237 (491)
T 3dax_A 195 ------------------------------FDKVFPALVAGLPIH--MFRTAHNAREKLAESLR---HENLQK--RESIS 237 (491)
T ss_dssp ------------------------------HHHHHHHHHTTCCGG--GSHHHHHHHHHHHHHTS---HHHHTT--CBSCC
T ss_pred ------------------------------HHHHhHHHHHhCCHh--hhhHHHHHHHHHHHHHH---HHHhhc--ccchh
Confidence 00334422 334432 33344444444443322 222222 12357
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-----
Q psy4821 309 DMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV----- 383 (520)
Q Consensus 309 d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~----- 383 (520)
|+++.+++...+.+ .+ +++++.++++++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 238 d~l~~ll~~~~~~~-------~~----~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~ 306 (491)
T 3dax_A 238 ELISLRMFLNDTLS-------TF----DDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306 (491)
T ss_dssp HHHHHHHHHHHHHB-------CC----CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhcC-------CC----hHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccc
Confidence 89999887654321 25 899999999999999999999999999999999999999999999731
Q ss_pred ------------------------hHHHhhhccccCccccceeecccccee----cCeeeCCCCEEEecccccccCCCCC
Q psy4821 384 ------------------------ATILETLRRSSVVALGTIHAVTRDVKF----NGFTIPKNTQIVPLLHAVHMDPELW 435 (520)
Q Consensus 384 ------------------------a~i~E~lRl~p~~~~~~~R~~~~d~~l----~g~~iP~G~~v~~~~~~~~~d~~~~ 435 (520)
|||+|+||++|+ +. ++|.+.+|+++ +||.|||||.|+++.+++||||++|
T Consensus 307 ~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~ 384 (491)
T 3dax_A 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384 (491)
T ss_dssp CCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS
T ss_pred cccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC
Confidence 899999999985 54 79999999999 7899999999999999999999999
Q ss_pred CCCCCccCCccCCCCCCc---------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCC-CCCCCC
Q psy4821 436 ESPEDFRPTRFLTPEGKV---------TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQP-LPSLKG 505 (520)
Q Consensus 436 ~~p~~F~PeRfl~~~~~~---------~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~ 505 (520)
+||++|+||||+++++.. ..+..|+|||+|+|.|||++||.+|++++++.||++|+|++.++.. .|++..
T Consensus 385 ~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~ 464 (491)
T 3dax_A 385 PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQ 464 (491)
T ss_dssp SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCG
T ss_pred CCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCc
Confidence 999999999999754331 2357899999999999999999999999999999999999976542 344433
Q ss_pred -CCceeecCC
Q psy4821 506 -NAGVTITPD 514 (520)
Q Consensus 506 -~~~~~~~p~ 514 (520)
..|+++.|.
T Consensus 465 ~~~~~~~~~p 474 (491)
T 3dax_A 465 SRAGLGILPP 474 (491)
T ss_dssp GGTBEEECCB
T ss_pred ccccccccCC
Confidence 246544443
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=2e-55 Score=462.74 Aligned_cols=387 Identities=20% Similarity=0.327 Sum_probs=288.5
Q ss_pred HHHhcCCCCCCCCCcc-cccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhcc-ccCCCcc
Q psy4821 30 MLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEE-FSGRPHT 107 (520)
Q Consensus 30 ~~~~~~~~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~-~~~r~~~ 107 (520)
+...+++.+.||||++ +|++||++.+.++++.++.+++++|||||++++|+.++++|+||+++++++.++. +...+..
T Consensus 5 ~~~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~ 84 (491)
T 3v8d_A 5 TSSRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH 84 (491)
T ss_dssp --CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHH
T ss_pred hhhhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHH
Confidence 4456677789999999 6999999999899999999999999999999999999999999999999998762 3322211
Q ss_pred h--hhhhhC--------Cch---HH-------------HHHHHHHHHH-HH-h----------CCCCCChhHHHHHHHHH
Q psy4821 108 E--LSSILG--------GYE---VN-------------VFLKSLQAQA-EL-C----------GATGVDVNPLLATSISN 149 (520)
Q Consensus 108 ~--~~~~~~--------g~~---~~-------------~~~~~~~~~~-~l-~----------~~~~~~l~~~~~~~~~~ 149 (520)
. ....++ |.. +. .+...+++.+ ++ . .....++..++...+.+
T Consensus 85 ~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 164 (491)
T 3v8d_A 85 FALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164 (491)
T ss_dssp HHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHH
T ss_pred HHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHH
Confidence 1 111111 100 00 1112222222 12 1 24557889999999999
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhh
Q psy4821 150 VICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETM 229 (520)
Q Consensus 150 ~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (520)
+++..+||......+.....+.+.+++....
T Consensus 165 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 195 (491)
T 3v8d_A 165 AGYLTIFGRDLTRRDTQKAHILNNLDNFKQF------------------------------------------------- 195 (491)
T ss_dssp HHHHHHHCBCCSCGGGHHHHHHHHHHHHHHH-------------------------------------------------
T ss_pred HHHHHHcCccccccchhhhhhHHHHHHHHHH-------------------------------------------------
Confidence 9999999988765444333333333221100
Q ss_pred hhhccccccccccchhHHHHHHHHHHhhhhhhccccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcc
Q psy4821 230 AVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPF-VKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIR 308 (520)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 308 (520)
.+.+|. ...++.. ..++..++++.+.+++.+.+.++++ ...
T Consensus 196 -------------------------------~~~~~~l~~~~p~~--~~~~~~~a~~~l~~~~~~~~~~~~~-----~~~ 237 (491)
T 3v8d_A 196 -------------------------------DKVFPALVAGLPIH--MFRTAHNAREKLAESLRHENLQKRE-----SIS 237 (491)
T ss_dssp -------------------------------HHHHHHHHTTCCGG--GCHHHHHHHHHHHHHTSHHHHTTCB-----SCC
T ss_pred -------------------------------HHHHHHHHhcCChH--HHHHHHHHHHHHHHHHHHHHHhccc-----ccc
Confidence 022331 1223433 4566777777777777665554432 347
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-----
Q psy4821 309 DMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV----- 383 (520)
Q Consensus 309 d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~----- 383 (520)
|+++.++....+.+ .+ +++++..+++.+++||+|||+++++|++++|++||++|++||+||+++
T Consensus 238 d~l~~l~~~~~~~~-------~~----~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~ 306 (491)
T 3v8d_A 238 ELISLRMFLNDTLS-------TF----DDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306 (491)
T ss_dssp HHHHHHHHHHHHHB-------CC----CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhccC-------CC----chHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccc
Confidence 89999887655421 25 999999999999999999999999999999999999999999999642
Q ss_pred ------------------------hHHHhhhccccCccccceeecccccee----cCeeeCCCCEEEecccccccCCCCC
Q psy4821 384 ------------------------ATILETLRRSSVVALGTIHAVTRDVKF----NGFTIPKNTQIVPLLHAVHMDPELW 435 (520)
Q Consensus 384 ------------------------a~i~E~lRl~p~~~~~~~R~~~~d~~l----~g~~iP~G~~v~~~~~~~~~d~~~~ 435 (520)
+||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|+++.+++||||++|
T Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 384 (491)
T 3v8d_A 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384 (491)
T ss_dssp CCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS
T ss_pred cccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC
Confidence 899999999984 44 68999999999 9999999999999999999999999
Q ss_pred CCCCCccCCccCCCCCCc---------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCC-CCCCCCC
Q psy4821 436 ESPEDFRPTRFLTPEGKV---------TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQ-PLPSLKG 505 (520)
Q Consensus 436 ~~p~~F~PeRfl~~~~~~---------~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~ 505 (520)
+||++|+||||++.++.. ..+..|+|||+|+|.|||++||.+|++++++.||++|+|++++++ +.|.+..
T Consensus 385 ~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 464 (491)
T 3v8d_A 385 PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQ 464 (491)
T ss_dssp SSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCG
T ss_pred CCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCc
Confidence 999999999999865431 235788999999999999999999999999999999999998764 3454543
Q ss_pred -CCceeecCCCC
Q psy4821 506 -NAGVTITPDSH 516 (520)
Q Consensus 506 -~~~~~~~p~~~ 516 (520)
..|+.+.|.+.
T Consensus 465 ~~~~~~~~~p~~ 476 (491)
T 3v8d_A 465 SRAGLGILPPLN 476 (491)
T ss_dssp GGTBEEECCBSS
T ss_pred ccCcCcccCCCC
Confidence 34655554433
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=1.3e-54 Score=457.24 Aligned_cols=391 Identities=16% Similarity=0.274 Sum_probs=271.9
Q ss_pred HHHHhcCCCCCCCCCcc-cccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-c-ccCCC
Q psy4821 29 IMLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-E-FSGRP 105 (520)
Q Consensus 29 ~~~~~~~~~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~-~~~r~ 105 (520)
+|...+++.+.||||++ +|++||++.+..+++.++.+|+++|||||++++|++++++++||+++++++.++ . ++.++
T Consensus 9 ~~~~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~ 88 (498)
T 3b6h_A 9 LSRRRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHA 88 (498)
T ss_dssp ----CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCH
T ss_pred HHHHhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchh
Confidence 35566777889999998 899999998877899999999999999999999999999999999999999876 2 54443
Q ss_pred cch-hhhhhCCchHH---------------------HHHHHHHHHH-H-H-----h---CCCCCChhHHHHHHHHHHHHH
Q psy4821 106 HTE-LSSILGGYEVN---------------------VFLKSLQAQA-E-L-----C---GATGVDVNPLLATSISNVICS 153 (520)
Q Consensus 106 ~~~-~~~~~~g~~~~---------------------~~~~~~~~~~-~-l-----~---~~~~~~l~~~~~~~~~~~i~~ 153 (520)
... ......|.+.. .+...+.+.+ + + . ....+++...+...++++++.
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~rr~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~ 168 (498)
T 3b6h_A 89 YAIFLMERIFDVQLPHYSPSDEKARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYL 168 (498)
T ss_dssp HHHHHHHHTSCCCCTTCCHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHcCCCccccCHHHHHHHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHH
Confidence 221 11111122111 1111111111 1 1 0 122367778888888888888
Q ss_pred HHhcccCCCCChHHH-HHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhh
Q psy4821 154 IVMSVRFSNEDPQFK-RFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVV 232 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (520)
..||.+++..+.... ...+.+.+..+.+.
T Consensus 169 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 198 (498)
T 3b6h_A 169 TLYGIEALPRTHESQAQDRVHSADVFHTFR-------------------------------------------------- 198 (498)
T ss_dssp HHHCBSCSSCCHHHHHHHHHHHHHHHHHHH--------------------------------------------------
T ss_pred hhcCcccccccccchhhHHHhhHHHHHHHH--------------------------------------------------
Confidence 889988765443211 12222222111100
Q ss_pred ccccccccccchhHHHHHHHHHHhhhhhhccccccc-ccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhH
Q psy4821 233 NFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVK-YLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDML 311 (520)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l 311 (520)
...+.+|++. .+... ...++..++++.+.+.+. +++.++ .....|++
T Consensus 199 --------------------------~~~~~~p~l~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~d~l 246 (498)
T 3b6h_A 199 --------------------------QLDRLLPKLARGSLSV-GDKDHMCSVKSRLWKLLS---PARLAR--RAHRSKWL 246 (498)
T ss_dssp --------------------------HHHHHHHHHHHTCCCH-HHHHHHHHHHHHHHHHTC---HHHHTT--CBSCCHHH
T ss_pred --------------------------HHHhhHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH---HHHHhc--cccHHHHH
Confidence 0013344221 11111 123344444444443322 222222 12356999
Q ss_pred HHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH--------
Q psy4821 312 DSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------- 383 (520)
Q Consensus 312 ~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-------- 383 (520)
+.+++...+.+ .+ +++++. .++++++||+|||+++++|++++|++||++|+|||+||+++
T Consensus 247 ~~ll~~~~~~~-------~~----~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~ 314 (498)
T 3b6h_A 247 ESYLLHLEEMG-------VS----EEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPV 314 (498)
T ss_dssp HHHHHHHHHTT-------CC----HHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHhCC-------CC----HHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCC
Confidence 99987654321 14 777887 88889999999999999999999999999999999999742
Q ss_pred ------------------hHHHhhhccccCccccceeecccccee-----cCeeeCCCCEEEecccc-cccCCCCCCCCC
Q psy4821 384 ------------------ATILETLRRSSVVALGTIHAVTRDVKF-----NGFTIPKNTQIVPLLHA-VHMDPELWESPE 439 (520)
Q Consensus 384 ------------------a~i~E~lRl~p~~~~~~~R~~~~d~~l-----~g~~iP~G~~v~~~~~~-~~~d~~~~~~p~ 439 (520)
|||+|+||++|+ +. ++|.+.+|+++ +||.|||||.|+++.++ +||||++|+||+
T Consensus 315 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~ 392 (498)
T 3b6h_A 315 SQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPE 392 (498)
T ss_dssp -----CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTT
T ss_pred CcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChh
Confidence 899999999985 54 79999999998 68999999999999999 999999999999
Q ss_pred CccCCccCCCCCCc---------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCC-CCCCCC-CCc
Q psy4821 440 DFRPTRFLTPEGKV---------TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQP-LPSLKG-NAG 508 (520)
Q Consensus 440 ~F~PeRfl~~~~~~---------~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~~ 508 (520)
+|+||||++.++.. ..+..++|||+|+|.|||++||.+|++++++.||++|+|+++++.. .|++.. ..|
T Consensus 393 ~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~ 472 (498)
T 3b6h_A 393 VFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYG 472 (498)
T ss_dssp SCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTB
T ss_pred hcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccc
Confidence 99999999755331 1356899999999999999999999999999999999999976542 343332 135
Q ss_pred eeecCCC
Q psy4821 509 VTITPDS 515 (520)
Q Consensus 509 ~~~~p~~ 515 (520)
+++.|.+
T Consensus 473 ~~~~~p~ 479 (498)
T 3b6h_A 473 FGLMQPE 479 (498)
T ss_dssp SSBCCBS
T ss_pred cccCCCC
Confidence 4444443
No 26
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=7.8e-55 Score=456.16 Aligned_cols=365 Identities=18% Similarity=0.242 Sum_probs=253.0
Q ss_pred HHHHhcCCCCCCCCCcc-cccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCc
Q psy4821 29 IMLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPH 106 (520)
Q Consensus 29 ~~~~~~~~~~~ppgP~~-~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~ 106 (520)
+|.+.+++.+.||||++ +|++||++++..+++.++.+|+++|||||++++|+.++++++||+++++++.++ .++.++.
T Consensus 9 ~~~~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~ 88 (475)
T 3b98_A 9 LYGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSY 88 (475)
T ss_dssp ----CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHH
T ss_pred HhhhcccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcccCCchHH
Confidence 34556777789999998 999999998877899999999999999999999999999999999999999876 3443321
Q ss_pred ch-hhhhhCCchHH---------------------HHHHHHHHHH-HH----h-CC-C----CCChhHHHHHHHHHHHHH
Q psy4821 107 TE-LSSILGGYEVN---------------------VFLKSLQAQA-EL----C-GA-T----GVDVNPLLATSISNVICS 153 (520)
Q Consensus 107 ~~-~~~~~~g~~~~---------------------~~~~~~~~~~-~l----~-~~-~----~~~l~~~~~~~~~~~i~~ 153 (520)
.. ......|.++. .+...+.+.+ ++ . .+ . .+++...+...+.++++.
T Consensus 89 ~~~~~~~~~g~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (475)
T 3b98_A 89 AQVLMKRIFNMILPSHNPESEKKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYL 168 (475)
T ss_dssp HHHHHHHTTCCCCTTCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCChHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhh
Confidence 11 11111122111 1111111111 11 1 11 1 234455555555555555
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
..||.. +.....+.+..+.... .
T Consensus 169 ~~~g~~----~~~~~~~~~~~~~~~~------~----------------------------------------------- 191 (475)
T 3b98_A 169 TVFGAE----NNNSAALTQIYEEFRR------F----------------------------------------------- 191 (475)
T ss_dssp HHHCCT----TSCHHHHHHHHHHHHH------H-----------------------------------------------
T ss_pred heeCCc----cccchhcHHHHHHHHH------H-----------------------------------------------
Confidence 555532 1111111111111000 0
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccccc--cCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKY--LPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDML 311 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l 311 (520)
.+.+|++.. ++.. ..++..++++.+.+.+. +++.+. .....|++
T Consensus 192 ---------------------------~~~~p~l~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~d~l 237 (475)
T 3b98_A 192 ---------------------------DKLLPKLARTTVNKE--EKQIASAAREKLWKWLT---PSGLDR--KPREQSWL 237 (475)
T ss_dssp ---------------------------HHHHHHHHTTCCCHH--HHHHHHHHHHHHHHHHS---CTTSCC--CCCTTSHH
T ss_pred ---------------------------HhhhHHHHHHhcChh--hhHHHHHHHHHHHHHHH---HHHhhc--cccccHHH
Confidence 022332211 1111 23334444443333221 122211 22357899
Q ss_pred HHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHH----------
Q psy4821 312 DSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELD---------- 381 (520)
Q Consensus 312 ~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~---------- 381 (520)
+.+++...+.+ .+ +++++. +++++++||+|||+++++|++++|++||++|++||+|++
T Consensus 238 ~~ll~~~~~~~-------~~----~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~ 305 (475)
T 3b98_A 238 GSYVKQLQDEG-------ID----AEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEER 305 (475)
T ss_dssp HHHHHHHHHTT-------CC----HHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHcC-------CC----HHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCCCCHHH
Confidence 99987654311 25 888888 999999999999999999999999999999999999998
Q ss_pred -----hH-hHHHhhhccccCccccceeecccccee-----cCeeeCCCCEEEecccc-cccCCCCCCCCCCccCCccCCC
Q psy4821 382 -----TV-ATILETLRRSSVVALGTIHAVTRDVKF-----NGFTIPKNTQIVPLLHA-VHMDPELWESPEDFRPTRFLTP 449 (520)
Q Consensus 382 -----~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l-----~g~~iP~G~~v~~~~~~-~~~d~~~~~~p~~F~PeRfl~~ 449 (520)
-+ +||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|+++.++ +||||++|+||++|+||||+++
T Consensus 306 ~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~ 383 (475)
T 3b98_A 306 QKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNA 383 (475)
T ss_dssp --CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCT
T ss_pred HhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCC
Confidence 12 999999999986 55 79999999999 88999999999999999 9999999999999999999975
Q ss_pred CCCc---------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCC
Q psy4821 450 EGKV---------TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQ 498 (520)
Q Consensus 450 ~~~~---------~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~ 498 (520)
++.. ..+..|+|||+|+|.|||++||.+|++++++.||++|+|+++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 441 (475)
T 3b98_A 384 DRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKN 441 (475)
T ss_dssp TSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTT
T ss_pred CCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCC
Confidence 4321 235689999999999999999999999999999999999997764
No 27
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=5.9e-55 Score=445.34 Aligned_cols=349 Identities=18% Similarity=0.207 Sum_probs=265.2
Q ss_pred CCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCC-cchhhhhhCCchHH
Q psy4821 41 PGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRP-HTELSSILGGYEVN 119 (520)
Q Consensus 41 pgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~-~~~~~~~~~g~~~~ 119 (520)
++++.+|++||++.+..+++.++.+|+++||||++ ++|++++++++||+++++++.++.|++++ .......+.|.++.
T Consensus 2 ~~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~~f~~~~~~~~~~~~~~g~~l~ 80 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLL 80 (389)
T ss_dssp EECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTT
T ss_pred cccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcCCCCCChhHHHHHHHHhCCccc
Confidence 45678999999998877899999999999999999 99999999999999999999876676665 22222222222222
Q ss_pred ------------------------HHHHHHHHHH-HH---hCCCCCChhHHHHHHHHHHHHHHHhcccCCCCChHHHHHH
Q psy4821 120 ------------------------VFLKSLQAQA-EL---CGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFM 171 (520)
Q Consensus 120 ------------------------~~~~~~~~~~-~l---~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~ 171 (520)
.+...+++.+ ++ ..++.+|+...+..++.++++.++||.+++ + ++.
T Consensus 81 ~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~--~----~~~ 154 (389)
T 1n97_A 81 TDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLS--P----SLA 154 (389)
T ss_dssp TCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCC--H----HHH
T ss_pred cCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcch--H----HHH
Confidence 1112222222 11 116789999999999999999999998876 1 333
Q ss_pred HHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHH
Q psy4821 172 HLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTL 251 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (520)
+.++...+... .
T Consensus 155 ~~~~~~~~~~~-~------------------------------------------------------------------- 166 (389)
T 1n97_A 155 EHALKALDRIM-A------------------------------------------------------------------- 166 (389)
T ss_dssp HHHHHHHHHHH-H-------------------------------------------------------------------
T ss_pred HHHHHHHHHHH-H-------------------------------------------------------------------
Confidence 33332211110 0
Q ss_pred HHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccc
Q psy4821 252 SKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLF 331 (520)
Q Consensus 252 ~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l 331 (520)
..++++.++|.. ..++..++.+.+.+++.+.++++ ++ . .+
T Consensus 167 ----------~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~i~~r---------------ll----~---------~l 206 (389)
T 1n97_A 167 ----------QTRSPLALLDLA--AEARFRKDRGALYREAEALIVHP---------------PL----S---------HL 206 (389)
T ss_dssp ----------HHHCGGGGGCHH--HHHHHHHHHHHHHHHHGGGTTST---------------TG----G---------GS
T ss_pred ----------HHhhHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHH---------------hc----c---------cC
Confidence 001111333322 34445555555655555444332 22 0 26
Q ss_pred cCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecccccee
Q psy4821 332 NGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKF 410 (520)
Q Consensus 332 ~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l 410 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++. .+|.+.+|+++
T Consensus 207 ----~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~a~i~E~lRl~p~~~~-~~R~~~~d~~l 281 (389)
T 1n97_A 207 ----PRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLYPPAWI-LTRRLERPLLL 281 (389)
T ss_dssp ----CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHHHHHHSCSSCC-EEEEESSCEEE
T ss_pred ----CHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cceeeCCCceE
Confidence 999999999999999999999999999999999999999999999998 999999999999998 69999999999
Q ss_pred cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy4821 411 NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490 (520)
Q Consensus 411 ~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f 490 (520)
+||.||||+.|.++.+++||| +|+||++|+||||+++. ...+..++|||+|+|.|+|+++|.+|++++++.|+++|
T Consensus 282 ~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~--~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f 357 (389)
T 1n97_A 282 GEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357 (389)
T ss_dssp TTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC--CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC--CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999 99999999999998651 23456899999999999999999999999999999999
Q ss_pred ceecCCCCCCCCCCCCCceeecCC-CCCC
Q psy4821 491 GIESPPGQPLPSLKGNAGVTITPD-SHKD 518 (520)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~ 518 (520)
++++.++.+ + ..+++..|. +++|
T Consensus 358 ~~~~~~~~~-~----~~~~~~~p~~~~~v 381 (389)
T 1n97_A 358 RLDPLPFPR-V----LAQVTLRPEGGLPA 381 (389)
T ss_dssp BCCCCCCCC-E----EESSSEEETTCCEE
T ss_pred eEEeCCCCc-c----cceEEeeeCCCceE
Confidence 999876543 2 234455554 4443
No 28
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=1.1e-53 Score=442.21 Aligned_cols=342 Identities=17% Similarity=0.218 Sum_probs=255.1
Q ss_pred HhcCCCCCCCCCcccccccccc-cCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCcchh
Q psy4821 32 YIKKVRSLPPGPWGLPIIGYLP-FLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPHTEL 109 (520)
Q Consensus 32 ~~~~~~~~ppgP~~~p~lG~~~-~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~ 109 (520)
+.++.++.||||+++|++||+. .+..+++..+.++ ++||||+++++ |+.++++++||+++++++.++.|++++....
T Consensus 20 ~~~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~ 98 (436)
T 2cd8_A 20 HMRRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADPRFSKDWRNST 98 (436)
T ss_dssp --------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCTTEECCGGGCS
T ss_pred ccchhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCCCCcccccccc
Confidence 3566678899999999999986 4567899999999 99999999998 8899999999999999998876666543111
Q ss_pred hh-----hhCCchHH------------------------HHHHHHHHHH-----HHh-C-CCCCChhHHH-HHHHHHHHH
Q psy4821 110 SS-----ILGGYEVN------------------------VFLKSLQAQA-----ELC-G-ATGVDVNPLL-ATSISNVIC 152 (520)
Q Consensus 110 ~~-----~~~g~~~~------------------------~~~~~~~~~~-----~l~-~-~~~~~l~~~~-~~~~~~~i~ 152 (520)
.. ...+.++. .+...+++.+ ++. . ++.+|+...+ ..++.++++
T Consensus 99 ~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~ 178 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVIS 178 (436)
T ss_dssp SCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHH
T ss_pred cccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 00 11122222 1112222222 223 3 5678888866 468888888
Q ss_pred HHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhh
Q psy4821 153 SIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVV 232 (520)
Q Consensus 153 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (520)
. +||.+... ...+.+.++...
T Consensus 179 ~-~~G~~~~~----~~~~~~~~~~~~------------------------------------------------------ 199 (436)
T 2cd8_A 179 E-LLGVPEPD----RAAFRVWTDAFV------------------------------------------------------ 199 (436)
T ss_dssp H-HHTCCGGG----HHHHHHHHHHHH------------------------------------------------------
T ss_pred H-HhCCCHHH----HHHHHHHHHHHh------------------------------------------------------
Confidence 7 68875421 112221111100
Q ss_pred ccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHH
Q psy4821 233 NFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLD 312 (520)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~ 312 (520)
... .+ ++..++...+.+++.+.++++++. ...|+++
T Consensus 200 -----------------------------~~~-----~~------~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~ 235 (436)
T 2cd8_A 200 -----------------------------FPD-----DP------AQAQTAMAEMSGYLSRLIDSKRGQ----DGEDLLS 235 (436)
T ss_dssp -----------------------------SCS-----ST------THHHHHHHHHHHHHHHHHHHHTTS----CCCSHHH
T ss_pred -----------------------------ccC-----CH------HHHHHHHHHHHHHHHHHHHHHhcC----CCCCHHH
Confidence 000 00 234556677888888888887764 2368999
Q ss_pred HHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhc
Q psy4821 313 SYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLR 391 (520)
Q Consensus 313 ~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lR 391 (520)
.+++...++ +..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||
T Consensus 236 ~ll~~~~~~------~~~l----s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lR 305 (436)
T 2cd8_A 236 ALVRTSDED------GSRL----TSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLR 305 (436)
T ss_dssp HHHHHHHHC------TTTS----CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHhhhcc------CCCC----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChhhHHHHHHHHHH
Confidence 999765431 1136 999999999999999999999999999999999999999999999877 99999999
Q ss_pred cccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcc
Q psy4821 392 RSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLG 471 (520)
Q Consensus 392 l~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G 471 (520)
++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||- ..++|||+|+|.|+|
T Consensus 306 l~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~~pFG~G~r~C~G 376 (436)
T 2cd8_A 306 YEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT---------AGHLAFGHGIHFCIG 376 (436)
T ss_dssp HHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTCCTT
T ss_pred hcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC---------CCCCCCCCCCCCCcC
Confidence 99999966899999999999999999999999999999999999999999999961 368999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhc-ceecCC
Q psy4821 472 DVLARMELFLFFSTLMHTF-GIESPP 496 (520)
Q Consensus 472 ~~~a~~e~~~~l~~ll~~f-~~~~~~ 496 (520)
++||.+|++++++.||++| ++++..
T Consensus 377 ~~lA~~e~~~~la~ll~~f~~~~~~~ 402 (436)
T 2cd8_A 377 APLARLEARIAVRALLERCPDLALDV 402 (436)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCCBCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecC
Confidence 9999999999999999999 699864
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=2.8e-52 Score=427.85 Aligned_cols=332 Identities=17% Similarity=0.243 Sum_probs=256.6
Q ss_pred CCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEE----e-cC-eeEEEecCHHHHHHHH-hhccccCCCcch
Q psy4821 36 VRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTK----L-GD-QLIVVLSDYRHIREAF-RKEEFSGRPHTE 108 (520)
Q Consensus 36 ~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~----~-g~-~~~vvi~dp~~i~~i~-~~~~~~~r~~~~ 108 (520)
..+.||||+++|+. +..+++..+.+| ++||||++++ + |+ +++++++||+++++++ .+..|++++...
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~~~~~~~~~ 81 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFT 81 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC-
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcccccccccc
Confidence 35689999999976 456889999999 9999999999 6 88 8999999999999999 555565554311
Q ss_pred -----hhh-hhCCchHH------------------------HHHHHHHHHH-----HH-hCCCCCChhHHHHH-HHHHHH
Q psy4821 109 -----LSS-ILGGYEVN------------------------VFLKSLQAQA-----EL-CGATGVDVNPLLAT-SISNVI 151 (520)
Q Consensus 109 -----~~~-~~~g~~~~------------------------~~~~~~~~~~-----~l-~~~~~~~l~~~~~~-~~~~~i 151 (520)
... ...+.++. .+...+++.+ ++ ..++.+|+...+.. ++.+++
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi 161 (406)
T 1ued_A 82 QSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHAL 161 (406)
T ss_dssp --------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHhHHHHH
Confidence 000 00111222 1111222222 12 23567898887764 888888
Q ss_pred HHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhh
Q psy4821 152 CSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAV 231 (520)
Q Consensus 152 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (520)
+ .+||.+.. +...+.+.++.
T Consensus 162 ~-~~~G~~~~----~~~~~~~~~~~------------------------------------------------------- 181 (406)
T 1ued_A 162 C-ELLGIPRD----DQREFVRRIRR------------------------------------------------------- 181 (406)
T ss_dssp H-HHHTCCHH----HHHHHHHHHHH-------------------------------------------------------
T ss_pred H-HHcCCCHH----HHHHHHHHHHH-------------------------------------------------------
Confidence 8 46886421 11112111110
Q ss_pred hccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhH
Q psy4821 232 VNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDML 311 (520)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l 311 (520)
.+.. .. ..++..++.+.+.+++.+.++++++. ...|++
T Consensus 182 -------------------------------~~~~----~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l 219 (406)
T 1ued_A 182 -------------------------------NADL----SR---GLKARAADSAAFNRYLDNLLARQRAD----PDDGLL 219 (406)
T ss_dssp -------------------------------CC-------C---CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHH
T ss_pred -------------------------------HHhc----cC---CHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHH
Confidence 0000 00 12345667778888888888887764 236899
Q ss_pred HHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhh
Q psy4821 312 DSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETL 390 (520)
Q Consensus 312 ~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~l 390 (520)
+.+++.. + ..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+|
T Consensus 220 ~~ll~~~---~------~~l----s~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~l 286 (406)
T 1ued_A 220 GMIVRDH---G------DNV----TDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELV 286 (406)
T ss_dssp HHHHHHH---G------GGS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHH
T ss_pred HHHHHhc---C------CCC----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHHHHHHHHHHHH
Confidence 9999764 1 136 999999999999999999999999999999999999999999999877 9999999
Q ss_pred ccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCc
Q psy4821 391 RRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCL 470 (520)
Q Consensus 391 Rl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~ 470 (520)
|++|+++.+++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||| +..++|||.|+|.|+
T Consensus 287 Rl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------~~~~~pFG~G~r~C~ 357 (406)
T 1ued_A 287 RYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA---------AVSDVGFGHGIHYCV 357 (406)
T ss_dssp HHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC---------CCCCCTTCCSTTSCT
T ss_pred hcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC---------CCCCCCCCCCCcCCC
Confidence 99999997789999999999999999999999999999999999999999999998 236899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 471 GDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 471 G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
|++||.+|++++++.||++| ++++..+
T Consensus 358 G~~lA~~e~~~~la~ll~~f~~~~~~~~ 385 (406)
T 1ued_A 358 GAALARSMLRMAYQTLWRRFPGLRLAVP 385 (406)
T ss_dssp THHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCceecCC
Confidence 99999999999999999999 7998643
No 30
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=2.9e-51 Score=421.99 Aligned_cols=345 Identities=16% Similarity=0.211 Sum_probs=262.0
Q ss_pred cccccccccCCchHHHHHHHHHhhcC-CeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcch--hhhhhCC-chHH--
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYG-SIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTE--LSSILGG-YEVN-- 119 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~--~~~~~~g-~~~~-- 119 (520)
.|++||++.+..+|+.++.+++++|| |||++++++.++++++||++++.++..+.|++++... ....+.| .++.
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~l~~~ 87 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGM 87 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGGGC
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhcccccccccccccchhhhhccccceeec
Confidence 38999999988899999999999998 8999999999999999999998655433665543221 1111222 2222
Q ss_pred ----------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhcccCCCCChHHHHHHH
Q psy4821 120 ----------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172 (520)
Q Consensus 120 ----------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~ 172 (520)
.+...+++.+ ++..++.+|+...+..++.++++.+ ||.+++.. +...+.+
T Consensus 88 dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~ 164 (417)
T 1izo_A 88 DGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYW-AGVPLKET--EVKERAD 164 (417)
T ss_dssp CHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT--THHHHHH
T ss_pred CChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-cCCCCCch--HHHHHHH
Confidence 1112222222 2355678999999999999999997 69876642 2222222
Q ss_pred HHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHH
Q psy4821 173 LIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLS 252 (520)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (520)
.+......+.
T Consensus 165 ~~~~~~~~~~---------------------------------------------------------------------- 174 (417)
T 1izo_A 165 DFIDMVDAFG---------------------------------------------------------------------- 174 (417)
T ss_dssp HHHHHHHHTT----------------------------------------------------------------------
T ss_pred HHHHHHhhcc----------------------------------------------------------------------
Confidence 2211110000
Q ss_pred HHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccccccc
Q psy4821 253 KLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFN 332 (520)
Q Consensus 253 ~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~ 332 (520)
...| ...+..++.+.+.+++.+.++++++........|+++.+++..+. .+..+
T Consensus 175 ---------~~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~------~g~~l- 228 (417)
T 1izo_A 175 ---------AVGP----------RHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQE------DGSQL- 228 (417)
T ss_dssp ---------CCSH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCT------TSCBC-
T ss_pred ---------cCCc----------cchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHHHhccc------cCCCC-
Confidence 0001 233455677888899999999888754333456899988854221 11135
Q ss_pred CCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHH-HHhH-hHHHhhhccccCccccceeecccccee
Q psy4821 333 GKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDE-LDTV-ATILETLRRSSVVALGTIHAVTRDVKF 410 (520)
Q Consensus 333 ~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~E-i~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l 410 (520)
+++++.+++..++ ||++||+++++|++++|++||++|++|++| ..-+ +||+|+||++|+++. ++|.+.+|+++
T Consensus 229 ---~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l 303 (417)
T 1izo_A 229 ---DSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPF-LGALVKKDFVW 303 (417)
T ss_dssp ---CHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEE
T ss_pred ---CHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhcCCHHHHHHHHHHhhcCCcccc-cceeecCCeeE
Confidence 8888887777655 999999999999999999999999999997 3333 999999999999998 89999999999
Q ss_pred cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCC----CCCCcchHHHHHHHHHHHHHH
Q psy4821 411 NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG----RRMCLGDVLARMELFLFFSTL 486 (520)
Q Consensus 411 ~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G----~r~C~G~~~a~~e~~~~l~~l 486 (520)
+||.||||+.|+++.+++||||++|+||++|+||||++.+ ..+..|+|||+| +|.|+|++||.+|++++++.|
T Consensus 304 ~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~---~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~l 380 (417)
T 1izo_A 304 NNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFL 380 (417)
T ss_dssp TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC---CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC---CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999754 245689999999 599999999999999999999
Q ss_pred HhhcceecCCC
Q psy4821 487 MHTFGIESPPG 497 (520)
Q Consensus 487 l~~f~~~~~~~ 497 (520)
|++|+|+++++
T Consensus 381 l~~~~~~~~~~ 391 (417)
T 1izo_A 381 VHQIEYDVPEQ 391 (417)
T ss_dssp HHTEEEECCSC
T ss_pred HHhCeEEeCCC
Confidence 99999998764
No 31
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=4e-51 Score=420.05 Aligned_cols=338 Identities=16% Similarity=0.220 Sum_probs=254.7
Q ss_pred CCCCCCCCcccccccccccCCchHHHHHHHHHhhc-CCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCc---chhh
Q psy4821 36 VRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKY-GSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPH---TELS 110 (520)
Q Consensus 36 ~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~ky-G~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~---~~~~ 110 (520)
+...||+|+++|.+.....+..+|+..+.+| ++| |||+++++ |+.++++++||+++++++.++.|++++. ....
T Consensus 3 ~~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~ 81 (412)
T 2zbx_A 3 DTATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPRLSSNRTDDNFPAT 81 (412)
T ss_dssp -----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTTEECCTTSTTSCCC
T ss_pred CCCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcccccCccccccccc
Confidence 3467788888887643345677899999999 788 99999998 8999999999999999998765544432 1100
Q ss_pred h-----hh-CCchHH------------------------HHHHHHHHHH-----HHh-CCCCCChhHHHH-HHHHHHHHH
Q psy4821 111 S-----IL-GGYEVN------------------------VFLKSLQAQA-----ELC-GATGVDVNPLLA-TSISNVICS 153 (520)
Q Consensus 111 ~-----~~-~g~~~~------------------------~~~~~~~~~~-----~l~-~~~~~~l~~~~~-~~~~~~i~~ 153 (520)
. .. .+.++. .+...+++.+ ++. .++.+|+...+. .++.++++.
T Consensus 82 ~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~ 161 (412)
T 2zbx_A 82 SPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICR 161 (412)
T ss_dssp SGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH
T ss_pred ccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH
Confidence 0 00 111222 1112222222 222 256788887765 477888876
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
+||.+.+. ...+.+.++...
T Consensus 162 -~~G~~~~~----~~~~~~~~~~~~------------------------------------------------------- 181 (412)
T 2zbx_A 162 -LLGVPYAD----HEFFQDASKRLV------------------------------------------------------- 181 (412)
T ss_dssp -HHTCCGGG----HHHHHHHHHHHH-------------------------------------------------------
T ss_pred -HcCCCHHH----HHHHHHHHHHHh-------------------------------------------------------
Confidence 68875431 111221111100
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ 313 (520)
.. . . . ++..++.+.+.+++.+.++++++.. ..|+++.
T Consensus 182 ----------------------------~~-------~-~--~-~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ 218 (412)
T 2zbx_A 182 ----------------------------QS-------T-D--A-QSALTARNDLAGYLDGLITQFQTEP----GAGLVGA 218 (412)
T ss_dssp ----------------------------HC-------S-S--H-HHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHH
T ss_pred ----------------------------cc-------C-c--H-HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHH
Confidence 00 0 1 2 4455677778888888888877642 3689999
Q ss_pred HHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhcc
Q psy4821 314 YLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRR 392 (520)
Q Consensus 314 ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl 392 (520)
+++...+ +..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+||+
T Consensus 219 ll~~~~~-------~~~l----s~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl 287 (412)
T 2zbx_A 219 LVADQLA-------NGEI----DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRY 287 (412)
T ss_dssp HHHTTTT-------TTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHhccc-------CCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHHh
Confidence 9865321 1136 999999999999999999999999999999999999999999999877 999999999
Q ss_pred ccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcch
Q psy4821 393 SSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGD 472 (520)
Q Consensus 393 ~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~ 472 (520)
+|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||| +..++|||.|+|.|+|+
T Consensus 288 ~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~---------~~~~l~FG~G~r~C~G~ 358 (412)
T 2zbx_A 288 LAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS---------ARHHLAFGFGVHQCLGQ 358 (412)
T ss_dssp HCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC---------CTTCCTTCCSTTSCTTH
T ss_pred CCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC---------CCCccCCCCCCCcCccH
Confidence 999996689999999999999999999999999999999999999999999997 23689999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 473 VLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 473 ~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
+||.+|++++++.||++| ++++..+
T Consensus 359 ~lA~~e~~~~l~~ll~~f~~~~~~~~ 384 (412)
T 2zbx_A 359 NLARLELEVILNALMDRVPTLRLAVP 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCC
Confidence 999999999999999999 7998653
No 32
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5.5e-51 Score=418.16 Aligned_cols=336 Identities=18% Similarity=0.205 Sum_probs=252.3
Q ss_pred CCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEec-CeeEEEecCHHHHHHHHhhcc---ccCCCcchhhh---
Q psy4821 39 LPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-DQLIVVLSDYRHIREAFRKEE---FSGRPHTELSS--- 111 (520)
Q Consensus 39 ~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvi~dp~~i~~i~~~~~---~~~r~~~~~~~--- 111 (520)
.||||+++|++|++.. +|+..+.+|+ +||||++++++ |.+.+++++++++++++.++. +..++......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 5899999999999765 7899999996 69999999874 566677899999999998763 33333221110
Q ss_pred ---hhCCchHH------------------------HHHHHHHHHH-----HHh----CCCCCChhHHHHHHHHHHHHHHH
Q psy4821 112 ---ILGGYEVN------------------------VFLKSLQAQA-----ELC----GATGVDVNPLLATSISNVICSIV 155 (520)
Q Consensus 112 ---~~~g~~~~------------------------~~~~~~~~~~-----~l~----~~~~~~l~~~~~~~~~~~i~~~~ 155 (520)
..++.++. .+...+++.+ ++. .++.+|+...+...+.++++..+
T Consensus 78 ~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 157 (404)
T 1jfb_A 78 KQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTL 157 (404)
T ss_dssp HHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHH
T ss_pred cchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 11111221 1112222222 121 13568888888888888888888
Q ss_pred hcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccc
Q psy4821 156 MSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFL 235 (520)
Q Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (520)
||.+++. . ++.....+. ..
T Consensus 158 ~G~~~~~--~---~~~~~~~~~--------~~------------------------------------------------ 176 (404)
T 1jfb_A 158 LGVPFND--L---EYLTQQNAI--------RT------------------------------------------------ 176 (404)
T ss_dssp HTCCGGG--H---HHHHHHHHH--------HH------------------------------------------------
T ss_pred cCCCHHH--H---HHHHHHHHH--------Hh------------------------------------------------
Confidence 9875531 1 111111000 00
Q ss_pred cccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHH
Q psy4821 236 PFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYL 315 (520)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll 315 (520)
.. .+ ..++..++...+.+++.+.++++++. ...|+++.++
T Consensus 177 --------------------------~~------~~----~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll 216 (404)
T 1jfb_A 177 --------------------------NG------SS----TAREASAANQELLDYLAILVEQRLVE----PKDDIISKLC 216 (404)
T ss_dssp --------------------------CT------TS----CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHH
T ss_pred --------------------------cc------Cc----chHHHHHHHHHHHHHHHHHHHHHHhC----CCCcHHHHHH
Confidence 00 01 23445566778888888888887764 2468999998
Q ss_pred HHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhcccc
Q psy4821 316 FEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSS 394 (520)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p 394 (520)
+...+ +..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||++..-+ +||+|+||++|
T Consensus 217 ~~~~~-------~~~l----~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~~~yl~a~i~E~lRl~p 285 (404)
T 1jfb_A 217 TEQVK-------PGNI----DKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHT 285 (404)
T ss_dssp HHTTT-------TTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSC
T ss_pred Hhhcc-------CCCC----CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhChHhHHHHHHHHHhhCC
Confidence 64321 0136 999999999999999999999999999999999999999999975444 99999999999
Q ss_pred CccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHH
Q psy4821 395 VVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVL 474 (520)
Q Consensus 395 ~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~ 474 (520)
+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++ .++|||.|+|.|+|++|
T Consensus 286 ~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~~-------~~~~Fg~G~r~C~G~~l 358 (404)
T 1jfb_A 286 ASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQ-------DPLGFGFGDHRCIAEHL 358 (404)
T ss_dssp SCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCSS-------CCCTTCCGGGSCTTHHH
T ss_pred CccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCCC-------CCCCCCCCCccCCCHHH
Confidence 99966899999999999999999999999999999999999999999999997532 48999999999999999
Q ss_pred HHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 475 ARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 475 a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
|.+|++++++.||++| ++++..+
T Consensus 359 A~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 359 AKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp HHHHHHHHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHHHHHHHCCCceecCC
Confidence 9999999999999999 7998643
No 33
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=4.7e-51 Score=421.76 Aligned_cols=347 Identities=16% Similarity=0.214 Sum_probs=259.8
Q ss_pred CCCCCCCCCcccccccccccCC-----chHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhc-cccCCCc-
Q psy4821 35 KVRSLPPGPWGLPIIGYLPFLK-----GDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKE-EFSGRPH- 106 (520)
Q Consensus 35 ~~~~~ppgP~~~p~lG~~~~l~-----~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~-~~~~r~~- 106 (520)
.+++.||| ++|++.... .+|+..+.++++ ||||+++++ |+.++++++|++++++++.+. .|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~fs~r~~~ 76 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQPGLFSNAEGS 76 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCTTTEESSSSC
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCchhccCcccc
Confidence 35677787 889866552 579999999976 799999998 788999999999999999876 7877765
Q ss_pred chhh---h---h---hC-----CchHH------------------------HHHHHHHHHH-----HHhCC-CCCChhH-
Q psy4821 107 TELS---S---I---LG-----GYEVN------------------------VFLKSLQAQA-----ELCGA-TGVDVNP- 141 (520)
Q Consensus 107 ~~~~---~---~---~~-----g~~~~------------------------~~~~~~~~~~-----~l~~~-~~~~l~~- 141 (520)
.... . . .+ +.++. .+...+++.+ ++... +.+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~ 156 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMTD 156 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEHHHH
T ss_pred ccCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHHH
Confidence 2211 1 1 11 11222 1112222222 22333 5788874
Q ss_pred HHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCC
Q psy4821 142 LLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNE 221 (520)
Q Consensus 142 ~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (520)
+...++.++++.+ ||.+.+. ...+.+..+.......
T Consensus 157 ~~~~~~~~vi~~~-fG~~~~~----~~~~~~~~~~~~~~~~--------------------------------------- 192 (428)
T 1cpt_A 157 CALYYPLHVVMTA-LGVPEDD----EPLMLKLTQDFFGVHE--------------------------------------- 192 (428)
T ss_dssp TTTTHHHHHHHHH-HTCCGGG----HHHHHHHHHTTTCC-----------------------------------------
T ss_pred HHhhhHHHHHHHH-cCCCHhH----HHHHHHHHHHHHhccc---------------------------------------
Confidence 4467999999998 9986542 1222222211100000
Q ss_pred chhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy4821 222 GFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTT 301 (520)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 301 (520)
.....+|++..++.. ..++..++...+.+++.+.++++++.
T Consensus 193 -------------------------------------~~~~~~P~l~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~ 233 (428)
T 1cpt_A 193 -------------------------------------PDEQAVAAPRQSADE--AARRFHETIATFYDYFNGFTVDRRSC 233 (428)
T ss_dssp ---------------------------------------------------C--HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred -------------------------------------ccccccccccccchh--hHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000334555444212 34566778888999999999888763
Q ss_pred cCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHH
Q psy4821 302 FDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELD 381 (520)
Q Consensus 302 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~ 381 (520)
...|+++.+++... .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|++
T Consensus 234 ----~~~dll~~ll~~~~-------~~~~l----s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~ 298 (428)
T 1cpt_A 234 ----PKDDVMSLLANSKL-------DGNYI----DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA 298 (428)
T ss_dssp ----CCSSHHHHHHHCBS-------SSSBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred ----CCCcHHHHHHhccc-------cCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH
Confidence 23689999986421 11136 9999999999999999999999999999999999999999999998
Q ss_pred hH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCccc
Q psy4821 382 TV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFL 460 (520)
Q Consensus 382 ~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~ 460 (520)
.+ +||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.+ .++
T Consensus 299 ~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~l 368 (428)
T 1cpt_A 299 LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN---------RHL 368 (428)
T ss_dssp GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSC---------CCC
T ss_pred HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCCC---------CCC
Confidence 77 999999999999986 8999999999999999999999999999999999999999999999952 389
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHhhcc-eecC
Q psy4821 461 PFGVGRRMCLGDVLARMELFLFFSTLMHTFG-IESP 495 (520)
Q Consensus 461 ~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~ 495 (520)
|||+|+|.|+|++||.+|++++++.||++|+ +++.
T Consensus 369 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 404 (428)
T 1cpt_A 369 GFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELS 404 (428)
T ss_dssp TTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEES
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeC
Confidence 9999999999999999999999999999997 7876
No 34
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=5e-51 Score=419.97 Aligned_cols=348 Identities=14% Similarity=0.170 Sum_probs=262.0
Q ss_pred CCCCcccccccccccCCchHHHHHHHHHhhc-CCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcch--hhhhhCC
Q psy4821 40 PPGPWGLPIIGYLPFLKGDAHISFKNLSAKY-GSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTE--LSSILGG 115 (520)
Q Consensus 40 ppgP~~~p~lG~~~~l~~~~~~~~~~~~~ky-G~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~--~~~~~~g 115 (520)
|||| |++||++.+..+|+.++.+++++| |||+++++++.+++++++|++++ ++.+. .|++++... ....+.|
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~~~~~~~g 79 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDTTRFEREGAMPVAIQKTLLG 79 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCTTTEECTTCSCHHHHTTTSC
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcccccccccccchhhhhhccC
Confidence 5665 899999988788999999999999 79999999999999999999986 66655 676543321 1111222
Q ss_pred -chHH------------------------HHHHHHHHHH-----HHhCCCCCChhHHHHHHHHHHHHHHHhcccCCCCCh
Q psy4821 116 -YEVN------------------------VFLKSLQAQA-----ELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDP 165 (520)
Q Consensus 116 -~~~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~ 165 (520)
.++. .+...+++.+ ++..++.+|+...+..++.++++.+ ||.+++. .
T Consensus 80 ~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~-~G~~~~~--~ 156 (415)
T 3awm_A 80 QGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAW-AGVPLPD--D 156 (415)
T ss_dssp SSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHH-HTCCCCG--G
T ss_pred CcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHH-cCCCCCc--c
Confidence 2222 1112222222 2234567999999999999999998 8987653 2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchh
Q psy4821 166 QFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLR 245 (520)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (520)
+...+.+.+....
T Consensus 157 ~~~~~~~~~~~~~------------------------------------------------------------------- 169 (415)
T 3awm_A 157 EAGNRAGELRALF------------------------------------------------------------------- 169 (415)
T ss_dssp GHHHHHHHHHHHH-------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHH-------------------------------------------------------------------
Confidence 2222222111110
Q ss_pred HHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcc
Q psy4821 246 ETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMEN 325 (520)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ 325 (520)
..++.+ .. ...+..++.+.+.+++.+.++++++........|+++.+++..+.
T Consensus 170 ----------------~~~~~~----~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~----- 222 (415)
T 3awm_A 170 ----------------DAAGSA----SP--RHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDR----- 222 (415)
T ss_dssp ----------------HSTTCS----SH--HHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTSHHHHHHHCBCT-----
T ss_pred ----------------HHhccc----Cc--hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHhhhhc-----
Confidence 111100 11 234566777888899999999888753333446899998864221
Q ss_pred cccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeec
Q psy4821 326 RSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAV 404 (520)
Q Consensus 326 ~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~ 404 (520)
.+..+ +++++.+++..++ ||++||+++++|++++|++||++|++|++|..-+ +||+|+||++|+++. ++|.+
T Consensus 223 -~g~~~----~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~-~~R~~ 295 (415)
T 3awm_A 223 -HDDLL----SPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPA-VVARA 295 (415)
T ss_dssp -TSCBC----CHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHCTTHHHHHHHHHHHHSCCSCE-EEEEE
T ss_pred -cCCCC----CHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhcCCCccc-cceee
Confidence 11135 8888888877665 9999999999999999999999999999997666 999999999999997 89999
Q ss_pred cccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCC----CCCCcchHHHHHHHH
Q psy4821 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG----RRMCLGDVLARMELF 480 (520)
Q Consensus 405 ~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G----~r~C~G~~~a~~e~~ 480 (520)
.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+. .+..|+|||+| +|.|+|++||.+|++
T Consensus 296 ~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~---~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~ 372 (415)
T 3awm_A 296 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE---DSFNFIPQGGGDHYLGHRCPGEWIVLAIMK 372 (415)
T ss_dssp SSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC---CSSSCCTTCCSCTTTSCCCTTHHHHHHHHH
T ss_pred cCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC---CCCCccCCCCCCCCCCCcCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997542 45689999999 599999999999999
Q ss_pred HHHHHHHhhcceecCCCC
Q psy4821 481 LFFSTLMHTFGIESPPGQ 498 (520)
Q Consensus 481 ~~l~~ll~~f~~~~~~~~ 498 (520)
++++.|+++|+|++++++
T Consensus 373 ~~l~~ll~~f~~~~~~~~ 390 (415)
T 3awm_A 373 VAAHLLVNAMRYDVPDQD 390 (415)
T ss_dssp HHHHHHHHTCEEECCSCC
T ss_pred HHHHHHHHhcEEEeCCCC
Confidence 999999999999987653
No 35
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=2.9e-50 Score=413.59 Aligned_cols=345 Identities=14% Similarity=0.167 Sum_probs=254.0
Q ss_pred HHHHHHHHHhcCCCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-ccc
Q psy4821 24 LVLYKIMLYIKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFS 102 (520)
Q Consensus 24 ~~~~~~~~~~~~~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~ 102 (520)
+..|.+|+...++.+.+|||+ +..+|+.++.++++ |||| ++++.++++++||+++++++.++ .|+
T Consensus 5 ~~~~~iyr~~~~pl~~~PGp~----------~~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~~f~ 70 (411)
T 2jjn_A 5 VETTCCARRTLTTIDEVPGMA----------DETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTATFS 70 (411)
T ss_dssp ------------CCCSCCCSS----------CHHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTTTEE
T ss_pred hHhHHhhhcccCCCCCCCCcc----------cccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCccccc
Confidence 344456777888889999997 23589999999986 9999 67877899999999999999877 677
Q ss_pred CCCcchhhhh-hCCchHH-----------H-------------HHHHHHHHH-HH-h-CCCCCChhH-HHHHHHHHHHHH
Q psy4821 103 GRPHTELSSI-LGGYEVN-----------V-------------FLKSLQAQA-EL-C-GATGVDVNP-LLATSISNVICS 153 (520)
Q Consensus 103 ~r~~~~~~~~-~~g~~~~-----------~-------------~~~~~~~~~-~l-~-~~~~~~l~~-~~~~~~~~~i~~ 153 (520)
+++....... ..+.++. + +...+++.+ ++ . .++.+|+.. +...++.++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~vi~~ 150 (411)
T 2jjn_A 71 SDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAE 150 (411)
T ss_dssp SCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHHHHHH
T ss_pred CcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Confidence 7754221110 1122222 0 111222222 11 1 344678874 446788999999
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhc
Q psy4821 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVN 233 (520)
Q Consensus 154 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (520)
+ ||.+.+..+ .+.. ..+....
T Consensus 151 ~-fG~~~~~~~-~~~~---~~~~~~~------------------------------------------------------ 171 (411)
T 2jjn_A 151 L-LGLPPMDHE-QFGD---WSGALVD------------------------------------------------------ 171 (411)
T ss_dssp H-HTCCSCCCS-TTCC---HHHHHHH------------------------------------------------------
T ss_pred H-cCCCHHHHH-HHHH---HHHHHHh------------------------------------------------------
Confidence 8 998765321 1111 1111000
Q ss_pred cccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHH
Q psy4821 234 FLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313 (520)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ 313 (520)
...|. +++ +...++..++...+.+++.+.++++++. ...|+++.
T Consensus 172 ----------------------------~~~~~--~~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ 215 (411)
T 2jjn_A 172 ----------------------------IQMDD--PTD--PALAERIADVLNPLTAYLKARCAERRAD----PGDDLISR 215 (411)
T ss_dssp ----------------------------SCCSC--TTC--HHHHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHH
T ss_pred ----------------------------ccCcc--ccc--hHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHH
Confidence 00110 010 1145566777888889999999888763 24689999
Q ss_pred HHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhcc
Q psy4821 314 YLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRR 392 (520)
Q Consensus 314 ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl 392 (520)
+++... .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||+
T Consensus 216 ll~~~~-------~~~~l----~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl 284 (411)
T 2jjn_A 216 LVLAEV-------DGRAL----DDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLRY 284 (411)
T ss_dssp HHHCCB-------TTBCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHhccc-------CCCCC----CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHhhh
Confidence 886421 11136 999999999999999999999999999999999999999999999977 999999999
Q ss_pred ccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcch
Q psy4821 393 SSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGD 472 (520)
Q Consensus 393 ~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~ 472 (520)
+|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.+ ...++|||.|+|.|+|+
T Consensus 285 ~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-------~~~~~pFG~G~r~C~G~ 356 (411)
T 2jjn_A 285 RPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG-------GAAQLSFGHGVHFCLGA 356 (411)
T ss_dssp SCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS-------SCCCGGGCSSTTCCTTH
T ss_pred CCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC-------CCCccCCCCCCccCcCH
Confidence 999996 8999999999999999999999999999999999999999999999853 13589999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcc-eecCC
Q psy4821 473 VLARMELFLFFSTLMHTFG-IESPP 496 (520)
Q Consensus 473 ~~a~~e~~~~l~~ll~~f~-~~~~~ 496 (520)
+||.+|++++++.||++|+ +++..
T Consensus 357 ~lA~~e~~~~la~ll~~f~~~~~~~ 381 (411)
T 2jjn_A 357 PLARLENRVALEEIIARFGRLTVDR 381 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCEECC
T ss_pred HHHHHHHHHHHHHHHHhCCcceECC
Confidence 9999999999999999996 99874
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=5e-50 Score=411.14 Aligned_cols=332 Identities=17% Similarity=0.211 Sum_probs=252.1
Q ss_pred CCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEe-cCee-EEEecCHHHHHHHHhhccccCCCcchhh----h
Q psy4821 38 SLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKL-GDQL-IVVLSDYRHIREAFRKEEFSGRPHTELS----S 111 (520)
Q Consensus 38 ~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~-~vvi~dp~~i~~i~~~~~~~~r~~~~~~----~ 111 (520)
+.+|+|+++|+.++ ...+|+.++.+++ +||||+++++ |+.+ +++++||+++++++.++.|++++..... .
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~ 83 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLA 83 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBSS
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCCCccCCcCCCCCccccc
Confidence 67788888898876 4568999999995 7999999996 6776 9999999999999997767665432110 0
Q ss_pred h-h--CCchHH------------------------HHHHHHHHHH-----HHh-CCCCCChhHHH-HHHHHHHHHHHHhc
Q psy4821 112 I-L--GGYEVN------------------------VFLKSLQAQA-----ELC-GATGVDVNPLL-ATSISNVICSIVMS 157 (520)
Q Consensus 112 ~-~--~g~~~~------------------------~~~~~~~~~~-----~l~-~~~~~~l~~~~-~~~~~~~i~~~~fg 157 (520)
. . .+.++. .+...+++.+ ++. .++.+|+...+ ..++.++++. +||
T Consensus 84 ~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G 162 (406)
T 1s1f_A 84 PHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICE-LMG 162 (406)
T ss_dssp SSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHH-HHT
T ss_pred ccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHHHHHH-HhC
Confidence 1 1 122222 1111122222 223 45678887555 4678888887 588
Q ss_pred ccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccc
Q psy4821 158 VRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPF 237 (520)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (520)
.+++. ...+.+..+....
T Consensus 163 ~~~~~----~~~~~~~~~~~~~---------------------------------------------------------- 180 (406)
T 1s1f_A 163 VPATD----RHSMHTWTQLILS---------------------------------------------------------- 180 (406)
T ss_dssp CCGGG----HHHHHHHHHHHHH----------------------------------------------------------
T ss_pred CCHHH----HHHHHHHHHHHHh----------------------------------------------------------
Confidence 75432 1122221111100
Q ss_pred cccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHH
Q psy4821 238 VKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFE 317 (520)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 317 (520)
...| +. +..++...+.+++.+.++++++. ...|+++.+++.
T Consensus 181 ------------------------~~~~-----~~------~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll~~ 221 (406)
T 1s1f_A 181 ------------------------SSHG-----AE------VSERAKNEMNAYFSDLIGLRSDS----AGEDVTSLLGAA 221 (406)
T ss_dssp ------------------------HHTT-----CC------CCHHHHTHHHHHHHHHHHTSCCS----CCCSHHHHHHHH
T ss_pred ------------------------ccCC-----HH------HHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHh
Confidence 0001 11 12345566777788888877653 236899999976
Q ss_pred HHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCc
Q psy4821 318 IEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVV 396 (520)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~ 396 (520)
..+ ..+ +++++.+++.++++|| |||+++++|++++|++||++|+||++|++.+ +||+|+||++|++
T Consensus 222 ~~~--------~~l----s~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~ 288 (406)
T 1s1f_A 222 VGR--------DEI----TLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHR 288 (406)
T ss_dssp HHT--------TSS----CHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCB
T ss_pred hcc--------cCC----CHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhCCCc
Confidence 421 136 9999999999999999 9999999999999999999999999999987 9999999999999
Q ss_pred c-ccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHH
Q psy4821 397 A-LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLA 475 (520)
Q Consensus 397 ~-~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a 475 (520)
+ ..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||
T Consensus 289 ~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA 359 (406)
T 1s1f_A 289 NAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP---------NPHVSFGFGPHYCPGGMLA 359 (406)
T ss_dssp SSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-----------CCCCTTCCSTTCCTTHHHH
T ss_pred cccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC---------CCCCCCCCCCCCCcCHHHH
Confidence 9 45899999999999999999999999999999999999999999999995 2579999999999999999
Q ss_pred HHHHHHHHHHHHhhc-ceecCCC
Q psy4821 476 RMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 476 ~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
.+|++++++.||++| ++++.++
T Consensus 360 ~~e~~~~l~~ll~~f~~~~l~~~ 382 (406)
T 1s1f_A 360 RLESELLVDAVLDRVPGLKLAVA 382 (406)
T ss_dssp HHHHHHHHHHHHHHSTTCEESSC
T ss_pred HHHHHHHHHHHHHhCCCcEeCCC
Confidence 999999999999999 7998765
No 37
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=4.3e-49 Score=404.52 Aligned_cols=324 Identities=20% Similarity=0.229 Sum_probs=246.2
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCc--ch----hh------hhhCCchHH--
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPH--TE----LS------SILGGYEVN-- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~--~~----~~------~~~~g~~~~-- 119 (520)
.+.++|+..+.+| ++||||+++++++.++++++||+++++++.++.+++++. .. .. ....+.++.
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCCccccccccccccccccccccccccccccccccc
Confidence 4567899999999 999999999999999999999999999998765544331 11 00 000112222
Q ss_pred ----------------------HHHHHHHHHH-----HHh--C-CCCCChhHHHH-HHHHHHHHHHHhcccCCCCChHHH
Q psy4821 120 ----------------------VFLKSLQAQA-----ELC--G-ATGVDVNPLLA-TSISNVICSIVMSVRFSNEDPQFK 168 (520)
Q Consensus 120 ----------------------~~~~~~~~~~-----~l~--~-~~~~~l~~~~~-~~~~~~i~~~~fg~~~~~~~~~~~ 168 (520)
.+...+++.+ ++. . ++.+|+...+. .++.++++. +||.+.+ ...
T Consensus 91 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----~~~ 165 (408)
T 1odo_A 91 YGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQD----RRD 165 (408)
T ss_dssp CHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH----HHH
T ss_pred CChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHH----HHH
Confidence 1112222222 222 3 56788888776 488898885 6886432 111
Q ss_pred HHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHH
Q psy4821 169 RFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETR 248 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (520)
.+.+.++...
T Consensus 166 ~~~~~~~~~~---------------------------------------------------------------------- 175 (408)
T 1odo_A 166 GFRALVDGVF---------------------------------------------------------------------- 175 (408)
T ss_dssp HHHHHHHHHH----------------------------------------------------------------------
T ss_pred HHHHHHHHHh----------------------------------------------------------------------
Confidence 1211111100
Q ss_pred HHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccc
Q psy4821 249 KTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSD 328 (520)
Q Consensus 249 ~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~ 328 (520)
.. . . ..++..++...+.+++.+.++++++.. ..|+++.+++...++. .+
T Consensus 176 -------------~~--~-----~---~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~----~~ 224 (408)
T 1odo_A 176 -------------DT--T-----L---DQAEAQANTARLYEVLDQLIAAKRATP----GDDMTSLLIAARDDEG----DG 224 (408)
T ss_dssp -------------CT--T-----C---CHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHCC--------
T ss_pred -------------cc--c-----C---CHHHHHHHHHHHHHHHHHHHHHHhhCC----CCCHHHHHHHhccccc----cc
Confidence 00 0 0 123455667778888888888877642 3689999997643210 01
Q ss_pred ccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecccc
Q psy4821 329 QLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRD 407 (520)
Q Consensus 329 ~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d 407 (520)
..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|+..+ +||+|+||++|+++.+++|.+.+|
T Consensus 225 ~~l----~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~d 300 (408)
T 1odo_A 225 DRL----SPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTD 300 (408)
T ss_dssp -CC----CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSC
T ss_pred CCC----CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhCCCccCCcceEeCCC
Confidence 136 999999999999999999999999999999999999999999998766 999999999999997689999999
Q ss_pred ceec-CeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHH
Q psy4821 408 VKFN-GFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486 (520)
Q Consensus 408 ~~l~-g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~l 486 (520)
++++ ||.||||+.|+++.+++||||++|+||++|+|||+ +..++|||+|+|.|+|++||.+|++++++.|
T Consensus 301 ~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~l 371 (408)
T 1odo_A 301 IALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT---------VKEHLAFGHGVHFCLGAPLARMEVTLALESL 371 (408)
T ss_dssp EECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS---------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHH
T ss_pred eEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC---------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999994 2468999999999999999999999999999
Q ss_pred Hhhc-ceecCCC
Q psy4821 487 MHTF-GIESPPG 497 (520)
Q Consensus 487 l~~f-~~~~~~~ 497 (520)
|++| ++++..+
T Consensus 372 l~~f~~~~~~~~ 383 (408)
T 1odo_A 372 FGRFPDLRLADP 383 (408)
T ss_dssp HHHCTTCEESCT
T ss_pred HHhCCcceecCC
Confidence 9999 7998643
No 38
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=9.5e-50 Score=409.89 Aligned_cols=335 Identities=18% Similarity=0.201 Sum_probs=254.0
Q ss_pred cCCCCCCCCCcccccc--ccccc-----CCchHHHHHHHHHhhcC--CeeEEE-ecCeeEEEecCHHHHHHHHhhc-ccc
Q psy4821 34 KKVRSLPPGPWGLPII--GYLPF-----LKGDAHISFKNLSAKYG--SIFSTK-LGDQLIVVLSDYRHIREAFRKE-EFS 102 (520)
Q Consensus 34 ~~~~~~ppgP~~~p~l--G~~~~-----l~~~~~~~~~~~~~kyG--~i~~~~-~g~~~~vvi~dp~~i~~i~~~~-~~~ 102 (520)
+++.+.||||++.|.. +.+.. +..+|+..+.+|+ +|| |||+++ +| ++++++||+++++++.+. .|+
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~~~~f~ 83 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYEDYRHFS 83 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHCTTTEE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcCccccC
Confidence 5567899999999874 54322 3457999999996 799 999998 56 589999999999999876 688
Q ss_pred CCC-cchhhhhhCCch-HH------------------------HHHHHHHHHH-----HHhCCCCCChhHHH-HHHHHHH
Q psy4821 103 GRP-HTELSSILGGYE-VN------------------------VFLKSLQAQA-----ELCGATGVDVNPLL-ATSISNV 150 (520)
Q Consensus 103 ~r~-~~~~~~~~~g~~-~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~-~~~~~~~ 150 (520)
+++ .........+.+ +. .+...+++.+ ++..+..+|+...+ ..++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v 163 (415)
T 2zwu_A 84 SECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRI 163 (415)
T ss_dssp TTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTTHHHHHH
T ss_pred CCcccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 776 222111111222 22 1111222222 22333468888754 7889999
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhh
Q psy4821 151 ICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMA 230 (520)
Q Consensus 151 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (520)
++.+ ||.+++. ...+.+.++....
T Consensus 164 i~~~-~G~~~~~----~~~~~~~~~~~~~--------------------------------------------------- 187 (415)
T 2zwu_A 164 FMLL-AGLPEED----IPHLKYLTDQMTR--------------------------------------------------- 187 (415)
T ss_dssp HHHH-HTCCGGG----HHHHHHHHHHHHS---------------------------------------------------
T ss_pred HHHH-cCCCHHH----HHHHHHHHHHHHh---------------------------------------------------
Confidence 9988 9976542 1122222111100
Q ss_pred hhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchh
Q psy4821 231 VVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDM 310 (520)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~ 310 (520)
...|. +..++...+.+++.+.++++++. ...|+
T Consensus 188 -------------------------------~~~P~------------~~~~~~~~~~~~~~~~i~~r~~~----~~~dl 220 (415)
T 2zwu_A 188 -------------------------------PDGSM------------TFAEAKEALYDYLIPIIEQRRQK----PGTDA 220 (415)
T ss_dssp -------------------------------CCSSS------------CHHHHHHHHHHHHHHHHHHHHHS----CCSSH
T ss_pred -------------------------------ccCHH------------HHHHHHHHHHHHHHHHHHHHHhC----CCCCH
Confidence 00011 23456667778888888887763 23689
Q ss_pred HHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhh
Q psy4821 311 LDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILET 389 (520)
Q Consensus 311 l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~ 389 (520)
++.+++... .+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+
T Consensus 221 l~~ll~~~~-------~~~~l----~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~ 289 (415)
T 2zwu_A 221 ISIVANGQV-------NGRPI----TSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEEL 289 (415)
T ss_dssp HHHHHTCEE-------TTEEC----CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHhhh-------cCCCC----CHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHH
Confidence 999885421 11136 999999999999999999999999999999999999999999999877 999999
Q ss_pred hccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCC
Q psy4821 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMC 469 (520)
Q Consensus 390 lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C 469 (520)
||++|+++. + |.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||- ..++|||+|+|.|
T Consensus 290 lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C 358 (415)
T 2zwu_A 290 LRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---------VSHTTFGHGSHLC 358 (415)
T ss_dssp HHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCSS---------CCCCTTCCGGGCC
T ss_pred HhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCCC---------CCCCCCCCCCccC
Confidence 999999995 8 9999999999999999999999999999999999999999999962 3589999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhcc-eecCC
Q psy4821 470 LGDVLARMELFLFFSTLMHTFG-IESPP 496 (520)
Q Consensus 470 ~G~~~a~~e~~~~l~~ll~~f~-~~~~~ 496 (520)
+|++||.+|++++++.||++|+ +++.+
T Consensus 359 ~G~~lA~~e~~~~la~ll~~f~~~~~~~ 386 (415)
T 2zwu_A 359 LGQHLARREIIVTLKEWLTRIPDFSIAP 386 (415)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCSCEECT
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEECC
Confidence 9999999999999999999998 99876
No 39
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=1.1e-49 Score=408.28 Aligned_cols=321 Identities=19% Similarity=0.284 Sum_probs=246.1
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCc--c-h----hhhhhCCchHH------
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPH--T-E----LSSILGGYEVN------ 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~--~-~----~~~~~~g~~~~------ 119 (520)
.+..+|+..+.+| ++||||+++++ |++++++++||+++++++.++.|++++. . . ......+.++.
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 94 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSSFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE 94 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTTEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccccCCchh
Confidence 4566889999999 89999999997 8999999999999999999876666531 1 1 00111122222
Q ss_pred ------------------HHHHHHHHHH-----HHh-CCCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHHHH
Q psy4821 120 ------------------VFLKSLQAQA-----ELC-GATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMHLI 174 (520)
Q Consensus 120 ------------------~~~~~~~~~~-----~l~-~~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~ 174 (520)
.+...+++.+ ++. .++.+|+...+ ..++.++++. +||.+.+. ...+.+.+
T Consensus 95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~~~ 169 (403)
T 3aba_A 95 HTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISD-LFGVPVER----RAEFQDIA 169 (403)
T ss_dssp HHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG----HHHHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH----HHHHHHHH
Confidence 0111222222 223 45678887555 4677888886 67865431 11121111
Q ss_pred HHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHH
Q psy4821 175 DEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKL 254 (520)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (520)
+...
T Consensus 170 ~~~~---------------------------------------------------------------------------- 173 (403)
T 3aba_A 170 EAMM---------------------------------------------------------------------------- 173 (403)
T ss_dssp HHHS----------------------------------------------------------------------------
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 1100
Q ss_pred HhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCC
Q psy4821 255 FETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGK 334 (520)
Q Consensus 255 ~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~ 334 (520)
... .. . ++..++.+.+.+++.+.++++++.. ..|+++.+++... .+..+
T Consensus 174 -------~~~-------~~--p-~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~-------~~~~l--- 222 (403)
T 3aba_A 174 -------RVD-------QD--A-AATEAAGMRLGGLLYQLVQERRANP----GDDLISALITTED-------PDGVV--- 222 (403)
T ss_dssp -------BSS-------SC--H-HHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTSCC-------TTCCC---
T ss_pred -------hcc-------Cc--H-HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhcc-------CCCCC---
Confidence 000 00 1 4455677788888888888887642 3589999886421 11136
Q ss_pred CcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCe
Q psy4821 335 NHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGF 413 (520)
Q Consensus 335 ~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~ 413 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++..++|.+.+|++++||
T Consensus 223 -~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~ 301 (403)
T 3aba_A 223 -DDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGV 301 (403)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHHCSCTTCEEEEESSCEEETTE
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhcCCCcccccceEeCCCeEECCE
Confidence 999999999999999999999999999999999999999999999877 999999999999996689999999999999
Q ss_pred eeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ce
Q psy4821 414 TIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GI 492 (520)
Q Consensus 414 ~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~ 492 (520)
.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||++| ++
T Consensus 302 ~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~ 372 (403)
T 3aba_A 302 RIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP---------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGL 372 (403)
T ss_dssp EECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTC
T ss_pred EECCCCEEEechhhhCCChhhCCCccccCCCCCC---------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999983 3589999999999999999999999999999999 58
Q ss_pred ecCCC
Q psy4821 493 ESPPG 497 (520)
Q Consensus 493 ~~~~~ 497 (520)
++.++
T Consensus 373 ~l~~~ 377 (403)
T 3aba_A 373 RLAKP 377 (403)
T ss_dssp EESSC
T ss_pred eecCC
Confidence 98654
No 40
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=1.4e-48 Score=400.95 Aligned_cols=334 Identities=19% Similarity=0.251 Sum_probs=251.1
Q ss_pred CCCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCcchh-----
Q psy4821 36 VRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPHTEL----- 109 (520)
Q Consensus 36 ~~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~----- 109 (520)
.....+||.. |+- ..+..+|+..+.+|+ +||||+++++ |++++++++||+++++++.++.|++++....
T Consensus 5 ~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~ 79 (413)
T 2z36_A 5 VADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADGRFSSDKRKDGFPLFT 79 (413)
T ss_dssp -----CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCSS
T ss_pred HHHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCCCcccCccccCccccc
Confidence 3344566653 432 345668999999997 8899999998 8999999999999999999877766642211
Q ss_pred -h-hhh----CCch-HH-----------H---------HHHHHHH----HH-----HHh-C-CCCCChhHHH-HHHHHHH
Q psy4821 110 -S-SIL----GGYE-VN-----------V---------FLKSLQA----QA-----ELC-G-ATGVDVNPLL-ATSISNV 150 (520)
Q Consensus 110 -~-~~~----~g~~-~~-----------~---------~~~~~~~----~~-----~l~-~-~~~~~l~~~~-~~~~~~~ 150 (520)
. ... .|.+ +. + -++.+++ .+ ++. . ++.+|+...+ ..++.++
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~v 159 (413)
T 2z36_A 80 LDAATLQQLRSQPPLMLGMDGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLV 159 (413)
T ss_dssp CCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHH
T ss_pred cccccccccccccccccccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHH
Confidence 0 111 2334 32 0 0112222 22 223 3 5678877554 4577888
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhh
Q psy4821 151 ICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMA 230 (520)
Q Consensus 151 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (520)
++. +||.+.+. ...+....+.
T Consensus 160 i~~-~~G~~~~~----~~~~~~~~~~------------------------------------------------------ 180 (413)
T 2z36_A 160 ICE-LLGVPYTD----HDFFQSRTTM------------------------------------------------------ 180 (413)
T ss_dssp HHH-HHTCCGGG----HHHHHHHHHH------------------------------------------------------
T ss_pred HHH-HhCCCHHH----HHHHHHHHHH------------------------------------------------------
Confidence 887 47865431 1111111110
Q ss_pred hhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchh
Q psy4821 231 VVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDM 310 (520)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~ 310 (520)
++... . . ++..++...+.+++.+.++++++. ...|+
T Consensus 181 --------------------------------~~~~~-----~--~-~~~~~~~~~~~~~~~~~i~~r~~~----~~~dl 216 (413)
T 2z36_A 181 --------------------------------MVSRT-----S--M-EDRRRAFAELRAYIDDLITRKESE----PGDDL 216 (413)
T ss_dssp --------------------------------TTCSS-----C--H-HHHHHHHHHHHHHHHHHHHHHHSS----CCSSH
T ss_pred --------------------------------Hhccc-----C--c-HHHHHHHHHHHHHHHHHHHHHHhC----CCCCH
Confidence 00000 0 1 345566777888888888887764 23689
Q ss_pred HHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhh
Q psy4821 311 LDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILET 389 (520)
Q Consensus 311 l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~ 389 (520)
++.+++.... + ..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+
T Consensus 217 l~~ll~~~~~-~------~~l----s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~ 285 (413)
T 2z36_A 217 FSRQIARQRQ-E------GTL----DHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEEL 285 (413)
T ss_dssp HHHHHHHHHH-H------SCC----CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHhhcC-C------CCC----CHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChHHHHHHHHHH
Confidence 9999976422 1 136 999999999999999999999999999999999999999999999877 999999
Q ss_pred hccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCC
Q psy4821 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMC 469 (520)
Q Consensus 390 lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C 469 (520)
||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|
T Consensus 286 lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C 356 (413)
T 2z36_A 286 LRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA---------RHHLAFGFGPHQC 356 (413)
T ss_dssp HHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---------CCCCTTCCSTTSC
T ss_pred HHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC---------CCCCCCCCCCccC
Confidence 9999999966899999999999999999999999999999999999999999999983 2479999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 470 LGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 470 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
+|++||.+|++++++.||++| ++++.++
T Consensus 357 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 385 (413)
T 2z36_A 357 LGQNLARMELQIVFDTLFRRIPSLRLAVP 385 (413)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 999999999999999999999 5898764
No 41
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=2.5e-49 Score=406.32 Aligned_cols=321 Identities=21% Similarity=0.238 Sum_probs=246.3
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcchh-------hhhhCCchHH-------
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTEL-------SSILGGYEVN------- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~-------~~~~~g~~~~------- 119 (520)
.+..+|+..+.+| ++||||+++++|+.++++++||+++++++.++.|++++.... .....+.++.
T Consensus 17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 95 (411)
T 3a4g_A 17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMILMDPPDH 95 (411)
T ss_dssp GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTTEESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHH
T ss_pred hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCCcccccccccccccccccCcccccccccCCchHH
Confidence 3566899999999 999999999999999999999999999998876766653210 0010122322
Q ss_pred -----------------HHHHHHHHHH-----HHhCCCCCChhH-HHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Q psy4821 120 -----------------VFLKSLQAQA-----ELCGATGVDVNP-LLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDE 176 (520)
Q Consensus 120 -----------------~~~~~~~~~~-----~l~~~~~~~l~~-~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~ 176 (520)
.+...+++.+ ++..++.+|+.. +...++.++++.. ||.+.+. ...+.+.++.
T Consensus 96 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~----~~~~~~~~~~ 170 (411)
T 3a4g_A 96 TRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICEL-LGVPAED----RDDFSAWSSV 170 (411)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHH-HTCCGGG----HHHHHHHHHH
T ss_pred HHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHH-hCCCHHH----HHHHHHHHHH
Confidence 1112222222 223445788864 4467888888864 8875431 1122211111
Q ss_pred HhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHh
Q psy4821 177 GFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFE 256 (520)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (520)
. +
T Consensus 171 ~---------~--------------------------------------------------------------------- 172 (411)
T 3a4g_A 171 L---------V--------------------------------------------------------------------- 172 (411)
T ss_dssp H---------T---------------------------------------------------------------------
T ss_pred H---------h---------------------------------------------------------------------
Confidence 0 0
Q ss_pred hhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCc
Q psy4821 257 TMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNH 336 (520)
Q Consensus 257 ~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~ 336 (520)
...| + ++..++...+.+++.+.++++++. ...|+++.+++...+ .+..+ +
T Consensus 173 -----~~~p-----~------~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~------~~~~l----s 222 (411)
T 3a4g_A 173 -----DDSP-----A------DDKNAAMGKLHGYLSDLLERKRTE----PDDALLSSLLAVSDE------DGDRL----S 222 (411)
T ss_dssp -----TSSC-----T------TTHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCCCT------TCCCC----C
T ss_pred -----ccCC-----H------HHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhhcc------CCCCC----C
Confidence 1111 1 123456667788888888887764 236899999864210 11136 9
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeee
Q psy4821 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTI 415 (520)
Q Consensus 337 ~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~i 415 (520)
++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++..++|.+.+|++++||.|
T Consensus 223 ~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~I 302 (411)
T 3a4g_A 223 QEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTI 302 (411)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEE
T ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHHHHHHHHHHHHHhcccccCCceeEeCCCEEECCEEE
Confidence 99999999999999999999999999999999999999999999877 99999999999999668999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceec
Q psy4821 416 PKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIES 494 (520)
Q Consensus 416 P~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~ 494 (520)
|||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||++| ++++
T Consensus 303 p~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l 373 (411)
T 3a4g_A 303 PAGEMVMLGLAAANRDADWMPEPDRLDITRDA---------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELAL 373 (411)
T ss_dssp CTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCCEEEeChhhhCCChhhcCCccccCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 99999999999999999999999999999983 3589999999999999999999999999999999 6998
Q ss_pred CCC
Q psy4821 495 PPG 497 (520)
Q Consensus 495 ~~~ 497 (520)
.++
T Consensus 374 ~~~ 376 (411)
T 3a4g_A 374 AVG 376 (411)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
No 42
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=4.7e-49 Score=403.68 Aligned_cols=321 Identities=17% Similarity=0.224 Sum_probs=247.8
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcc--h----------hh-hh---hCCch
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHT--E----------LS-SI---LGGYE 117 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~--~----------~~-~~---~~g~~ 117 (520)
.+..+|+..+.+| ++||||+++++|++++++++||+++++++.++.|++++.. . .. .. ..+.+
T Consensus 11 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 11 SFHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp GGTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCCCccccccccccccccccccccccccchhhhcccc
Confidence 3456899999999 9999999999999999999999999999998777666532 1 11 11 01222
Q ss_pred HH------------------------HHHHHHHHHH-----HHhCCCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHH
Q psy4821 118 VN------------------------VFLKSLQAQA-----ELCGATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQF 167 (520)
Q Consensus 118 ~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~ 167 (520)
+. .+...+++.+ ++..++.+|+...+ ..++.++++. +||.+.+..+
T Consensus 90 l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~--- 165 (404)
T 1z8o_A 90 MGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICE-LLGVDEKYRG--- 165 (404)
T ss_dssp GGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHH-HTTCCGGGTT---
T ss_pred cccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHH-HhCCCHHHHH---
Confidence 22 1112222222 12345578887544 5788888887 4887543211
Q ss_pred HHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHH
Q psy4821 168 KRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRET 247 (520)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (520)
.+.+.++...
T Consensus 166 -~~~~~~~~~~--------------------------------------------------------------------- 175 (404)
T 1z8o_A 166 -EFGRWSSEIL--------------------------------------------------------------------- 175 (404)
T ss_dssp -THHHHHHHHH---------------------------------------------------------------------
T ss_pred -HHHHHHHHHh---------------------------------------------------------------------
Confidence 1111111100
Q ss_pred HHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHH-HHHHhhccc
Q psy4821 248 RKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFE-IEKAKMENR 326 (520)
Q Consensus 248 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~-~~~~~~~~~ 326 (520)
...| | ..++..++...+.+++.+.++++++. ...|+++.+++. ...
T Consensus 176 --------------~~~~-----p----~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~~~------ 222 (404)
T 1z8o_A 176 --------------VMDP-----E----RAEQRGQAAREVVNFILDLVERRRTE----PGDDLLSALIRVQDDD------ 222 (404)
T ss_dssp --------------CCCG-----G----GHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCEETT------
T ss_pred --------------ccCC-----h----hHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHhhhccc------
Confidence 1000 1 13455667778888888888888764 236899998864 211
Q ss_pred ccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecc
Q psy4821 327 SDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVT 405 (520)
Q Consensus 327 ~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~ 405 (520)
+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ .++|.+.
T Consensus 223 -~~~l----~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~~R~~~ 296 (404)
T 1z8o_A 223 -DGRL----SADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPE-TTTRFAA 296 (404)
T ss_dssp -TEEC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSC-CEEEEES
T ss_pred -CCCC----CHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHHhHHHHHHHHHHhcCCcc-CcceEEC
Confidence 1136 999999999999999999999999999999999999999999999877 99999999999999 5899999
Q ss_pred ccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHH
Q psy4821 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFST 485 (520)
Q Consensus 406 ~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ 485 (520)
+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.
T Consensus 297 ~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ 367 (404)
T 1z8o_A 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT---------RGHLSFGQGIHFCMGRPLAKLEGEVALRA 367 (404)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCSSTTCCTTHHHHHHHHHHHHHH
T ss_pred CCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC---------CCccCCCCCCccCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999984 35899999999999999999999999999
Q ss_pred HHhhc-ceecCCC
Q psy4821 486 LMHTF-GIESPPG 497 (520)
Q Consensus 486 ll~~f-~~~~~~~ 497 (520)
||++| ++++.++
T Consensus 368 ll~~f~~~~l~~~ 380 (404)
T 1z8o_A 368 LFGRFPALSLGID 380 (404)
T ss_dssp HHHHCTTCEESSC
T ss_pred HHHhCCCcEecCC
Confidence 99999 5898754
No 43
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=9.7e-49 Score=401.50 Aligned_cols=325 Identities=19% Similarity=0.224 Sum_probs=246.9
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcchh------hhhhCCchHH-------
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTEL------SSILGGYEVN------- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~------~~~~~g~~~~------- 119 (520)
.+..+|+..+.++ ++||||+++++|+.++++++||+++++++.++ .|++++.... .....|.++.
T Consensus 10 ~~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 88 (404)
T 3ejb_B 10 EFLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDH 88 (404)
T ss_dssp HHHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHH
T ss_pred ccccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchhhcCCchH
Confidence 3456899999999 58999999999999999999999999999987 6777663111 0011111211
Q ss_pred -----------------HHHHHHHHHH-----HHhCCCCCChhHH-HHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Q psy4821 120 -----------------VFLKSLQAQA-----ELCGATGVDVNPL-LATSISNVICSIVMSVRFSNEDPQFKRFMHLIDE 176 (520)
Q Consensus 120 -----------------~~~~~~~~~~-----~l~~~~~~~l~~~-~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~ 176 (520)
.+...+++.+ ++..+..+|+... ...++.++++. +||.+... ...+.+....
T Consensus 89 ~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~~~~~ 163 (404)
T 3ejb_B 89 RRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIAN-IIGVPEED----REQLKEWAAS 163 (404)
T ss_dssp HHHHHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHH-HHTCCGGG----HHHHHHHHHH
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHH-HcCCCHHH----HHHHHHHHHH
Confidence 1112222222 2245566777544 44577777777 47764431 1122222111
Q ss_pred HhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHh
Q psy4821 177 GFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFE 256 (520)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (520)
....
T Consensus 164 ~~~~---------------------------------------------------------------------------- 167 (404)
T 3ejb_B 164 LIQT---------------------------------------------------------------------------- 167 (404)
T ss_dssp HHGG----------------------------------------------------------------------------
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 1000
Q ss_pred hhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCc
Q psy4821 257 TMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNH 336 (520)
Q Consensus 257 ~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~ 336 (520)
..+| ......++..++...+.+++.+.++++++. ...|+++.++ ...+. ..+ +
T Consensus 168 -----~~~p------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll-~~~~~-------~~l----s 220 (404)
T 3ejb_B 168 -----IDFT------RSRKALTEGNIMAVQAMAYFKELIQKRKRH----PQQDMISMLL-KGREK-------DKL----T 220 (404)
T ss_dssp -----GSTT------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHH-HC-----------CC----C
T ss_pred -----ccCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CcchHHHHHH-hcccC-------CCC----C
Confidence 0112 111145566778888889999988888753 3468999998 32211 136 9
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeee
Q psy4821 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTI 415 (520)
Q Consensus 337 ~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~i 415 (520)
++++.+++..+++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ .++|.+.+|++++||.|
T Consensus 221 ~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~i 299 (404)
T 3ejb_B 221 EEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQ-MTARVASEDIDICGVTI 299 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEE
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCCccc-ccceEeCCCeEECCEEE
Confidence 99999999999999999999999999999999999999999999988 99999999999999 48999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceec
Q psy4821 416 PKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIES 494 (520)
Q Consensus 416 P~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~ 494 (520)
|||+.|+++.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|++++++.||++| ++++
T Consensus 300 p~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~---------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l 370 (404)
T 3ejb_B 300 RQGEQVYLLLGAANRDPSIFTNPDVFDITRSP---------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNL 370 (404)
T ss_dssp CTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS---------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCCEEEecHHHhCCChhhCCCcceeCCCCCC---------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999999982 3579999999999999999999999999999999 9999
Q ss_pred CCC
Q psy4821 495 PPG 497 (520)
Q Consensus 495 ~~~ 497 (520)
.++
T Consensus 371 ~~~ 373 (404)
T 3ejb_B 371 ADF 373 (404)
T ss_dssp C--
T ss_pred CCC
Confidence 754
No 44
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=7.2e-50 Score=408.98 Aligned_cols=320 Identities=14% Similarity=0.134 Sum_probs=244.3
Q ss_pred cCCchHHHHHHHHHhhc--CCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcchhhhh-h---------CCchHH-
Q psy4821 54 FLKGDAHISFKNLSAKY--GSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTELSSI-L---------GGYEVN- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~ky--G~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~-~---------~g~~~~- 119 (520)
.+.++|+.++.+|+++| |||+++++|+ ++++++||+++++++.+. .|++++....... . .|....
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKK 94 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHH
Confidence 45678999999999999 9999999986 589999999999999765 6766654332110 0 111111
Q ss_pred ---------------HHHHHHHHHH-----HHhCCCCCChhH-HHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHHh
Q psy4821 120 ---------------VFLKSLQAQA-----ELCGATGVDVNP-LLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGF 178 (520)
Q Consensus 120 ---------------~~~~~~~~~~-----~l~~~~~~~l~~-~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~ 178 (520)
.+...+++.+ .+..+..+|+.. +...++.++++. +||.+.. +...+.+.++...
T Consensus 95 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----~~~~~~~~~~~~~ 169 (398)
T 4fb2_A 95 YRQLVAKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAI-LLGLPPE----DGDTYRRWVWAIT 169 (398)
T ss_dssp HHHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGG----GHHHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH-HcCCCHH----HHHHHHHHHHHHh
Confidence 1112222222 123334456533 335677777777 5675432 1112222111110
Q ss_pred hhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhh
Q psy4821 179 KLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETM 258 (520)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (520)
T Consensus 170 -------------------------------------------------------------------------------- 169 (398)
T 4fb2_A 170 -------------------------------------------------------------------------------- 169 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHH
Q psy4821 259 AVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDR 338 (520)
Q Consensus 259 ~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ 338 (520)
. +. ..++..++.+.+.+++.+.++++++. ...|+++.+++...+ +..+ +++
T Consensus 170 ---~--------~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~-------~~~l----~~~ 220 (398)
T 4fb2_A 170 ---H--------VE---NPEEGAEIFAELVAHARTLIAERRTN----PGNDIMSRVIMSKID-------GESL----SED 220 (398)
T ss_dssp ---H--------CC---CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCCBT-------TBCC----CHH
T ss_pred ---c--------CC---CHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHcccC-------CCCC----CHH
Confidence 0 00 12355667788888888888888774 346899999865321 1136 999
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCC
Q psy4821 339 QMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPK 417 (520)
Q Consensus 339 ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~ 417 (520)
++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ ++|.+.+|++++||.|||
T Consensus 221 ~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~ 298 (398)
T 4fb2_A 221 DLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKP 298 (398)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCCBC--EEEEECSCEEETTEEECT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECC
Confidence 999999999999999999999999999999999999999999988 99999999999998 799999999999999999
Q ss_pred CCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCC
Q psy4821 418 NTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPP 496 (520)
Q Consensus 418 G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~ 496 (520)
|+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||++| +|++++
T Consensus 299 Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 369 (398)
T 4fb2_A 299 GQTAMLWFPIASRDRSAFDSPDNIVIERTP---------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDP 369 (398)
T ss_dssp TCEEEECHHHHTTCTTTSSSTTSCCTTCCS---------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECT
T ss_pred CCEEEechHhhcCChhhCCCcCeeCCCCCC---------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 999999999999999999999999999982 4689999999999999999999999999999999 999987
Q ss_pred CCC
Q psy4821 497 GQP 499 (520)
Q Consensus 497 ~~~ 499 (520)
+.+
T Consensus 370 ~~~ 372 (398)
T 4fb2_A 370 NKE 372 (398)
T ss_dssp TSC
T ss_pred CCC
Confidence 643
No 45
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=2.8e-49 Score=406.65 Aligned_cols=322 Identities=16% Similarity=0.245 Sum_probs=245.6
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCcc-hh---h-hhhCCchHH--------
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPHT-EL---S-SILGGYEVN-------- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~~-~~---~-~~~~g~~~~-------- 119 (520)
.+..+|+..+.+| ++||||+++++ |++++++++||+++++++.++.|++++.. .. . ....+.++.
T Consensus 34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~ 112 (417)
T 2y5n_A 34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS 112 (417)
T ss_dssp SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTTEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCCcccCccccccccccCcccccccCccCCchHHH
Confidence 4566899999999 89999999997 89999999999999999987766555432 10 1 111122222
Q ss_pred ----------------HHHHHHHHHH-----HHhCCC-CCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Q psy4821 120 ----------------VFLKSLQAQA-----ELCGAT-GVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMHLIDE 176 (520)
Q Consensus 120 ----------------~~~~~~~~~~-----~l~~~~-~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~ 176 (520)
.+...+++.+ ++..++ .+|+...+ ..++.++++. +||.+.+. ...+.+.++.
T Consensus 113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~~~~~ 187 (417)
T 2y5n_A 113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICE-LLGVPSAD----HDRFTRWSGA 187 (417)
T ss_dssp HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG----HHHHHHHHHT
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH----HHHHHHHHHH
Confidence 1111122221 222333 67877655 4577888876 57765431 1111111110
Q ss_pred HhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHh
Q psy4821 177 GFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFE 256 (520)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (520)
T Consensus 188 -------------------------------------------------------------------------------- 187 (417)
T 2y5n_A 188 -------------------------------------------------------------------------------- 187 (417)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCc
Q psy4821 257 TMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNH 336 (520)
Q Consensus 257 ~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~ 336 (520)
.+.... . ..++..++...+.+++.+.++++++.. ..|+++.+++... .+..+ +
T Consensus 188 ------~~~~~~-~-----~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~dll~~ll~~~~-------~~~~l----s 240 (417)
T 2y5n_A 188 ------FLSTAE-V-----TAEEMQEAAEQAYAYMGDLIDRRRKEP----TDDLVSALVQARD-------QQDSL----S 240 (417)
T ss_dssp ------TSTTCC-C-----CHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCB-------TTBCC----C
T ss_pred ------HhcccC-C-----CHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhhc-------cCCCC----C
Confidence 000000 0 124556677788888888888887642 3689999886431 11136 9
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCcc-ccceeeccccceecCee
Q psy4821 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVA-LGTIHAVTRDVKFNGFT 414 (520)
Q Consensus 337 ~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~-~~~~R~~~~d~~l~g~~ 414 (520)
++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ ..++|.+.+|++++||.
T Consensus 241 ~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~ 320 (417)
T 2y5n_A 241 EQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVT 320 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhcCCccccccceEeCCCEEECCEE
Confidence 99999999999999999999999999999999999999999999877 99999999999999 45899999999999999
Q ss_pred eCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-cee
Q psy4821 415 IPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIE 493 (520)
Q Consensus 415 iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~ 493 (520)
||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.||++| +++
T Consensus 321 Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~ 391 (417)
T 2y5n_A 321 IRAGEPVLASTGAANRDQAQFPDADRIDVDRTP---------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIR 391 (417)
T ss_dssp ECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ECCCCEEEeChhhhCCCcccCCCccccCCCCCC---------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcE
Confidence 999999999999999999999999999999983 3589999999999999999999999999999999 599
Q ss_pred cCCC
Q psy4821 494 SPPG 497 (520)
Q Consensus 494 ~~~~ 497 (520)
+.++
T Consensus 392 l~~~ 395 (417)
T 2y5n_A 392 LGIP 395 (417)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 8754
No 46
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=9.6e-49 Score=403.07 Aligned_cols=322 Identities=18% Similarity=0.254 Sum_probs=251.0
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEec-CeeEEEecCHHHHHHHHhhccccCCCcc---hhhhh------hCCchHH----
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKLG-DQLIVVLSDYRHIREAFRKEEFSGRPHT---ELSSI------LGGYEVN---- 119 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvi~dp~~i~~i~~~~~~~~r~~~---~~~~~------~~g~~~~---- 119 (520)
.+..+|+..+.+|+++ |||++++++ |.++++++||+++++++.++.|++++.. ..... ..+.++.
T Consensus 26 ~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 104 (417)
T 3tyw_A 26 GCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDPRVSADIRRPGFPALGEGEQEAGARFRPFIRTDA 104 (417)
T ss_dssp SSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCTTEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred ccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCCCcccCCccccccccccccccccccccchhhcCC
Confidence 3457899999999988 999999987 5899999999999999998766654321 11110 1122222
Q ss_pred --------------------HHHHHHHHHH-----HH-hCCCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHH
Q psy4821 120 --------------------VFLKSLQAQA-----EL-CGATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMH 172 (520)
Q Consensus 120 --------------------~~~~~~~~~~-----~l-~~~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~ 172 (520)
.+...+++.+ ++ ..++.+|+...+ ..++.++++.+ ||.+++..+ .+ .+
T Consensus 105 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~-~~---~~ 179 (417)
T 3tyw_A 105 PEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDLE-FF---RD 179 (417)
T ss_dssp HHHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTT-HH---HH
T ss_pred cHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHH-HH---HH
Confidence 1112222222 12 346678998877 56788888886 898765321 11 11
Q ss_pred HHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHH
Q psy4821 173 LIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLS 252 (520)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (520)
..+...
T Consensus 180 ~~~~~~-------------------------------------------------------------------------- 185 (417)
T 3tyw_A 180 VTRISG-------------------------------------------------------------------------- 185 (417)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHh--------------------------------------------------------------------------
Confidence 111100
Q ss_pred HHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccccccc
Q psy4821 253 KLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFN 332 (520)
Q Consensus 253 ~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~ 332 (520)
...+ ..++..++...+.+++.+.++++++. ...|+++.+++...+. ..+
T Consensus 186 ---------~~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~~-------~~l- 234 (417)
T 3tyw_A 186 ---------SRNS----------TAEQVSEALGGLFGLLGGLVAERREE----PRDDLISKLVTDHLVP-------GNV- 234 (417)
T ss_dssp ---------SSSS----------CTTHHHHHHHHHHHHHHHHHHHHHSS----CCSSHHHHHHHHTTTT-------TSS-
T ss_pred ---------cccC----------CHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHHhcccC-------CCC-
Confidence 1100 12235566777888888888888764 2469999999764321 126
Q ss_pred CCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceec
Q psy4821 333 GKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFN 411 (520)
Q Consensus 333 ~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~ 411 (520)
+++++.+++..+++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+||++|+++..++|.+.+|++++
T Consensus 235 ---s~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~ 311 (417)
T 3tyw_A 235 ---TTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELS 311 (417)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGGGHHHHHHHHHHHHCSCTTCCEEEESSCEECS
T ss_pred ---CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChHHHHHHHHHHHHhccccccCceeEeCCCeEEC
Confidence 999999999999999999999999999999999999999999999988 9999999999999987799999999999
Q ss_pred CeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-
Q psy4821 412 GFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF- 490 (520)
Q Consensus 412 g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f- 490 (520)
||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.||++|
T Consensus 312 G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp 382 (417)
T 3tyw_A 312 GRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD---------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVP 382 (417)
T ss_dssp SCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC---------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCT
T ss_pred CEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC---------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999993 3589999999999999999999999999999999
Q ss_pred ceecCCCC
Q psy4821 491 GIESPPGQ 498 (520)
Q Consensus 491 ~~~~~~~~ 498 (520)
+|+++.+.
T Consensus 383 ~~~l~~~~ 390 (417)
T 3tyw_A 383 TLRLAGER 390 (417)
T ss_dssp TCEECSCT
T ss_pred cccccCCC
Confidence 99997543
No 47
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=9.9e-49 Score=403.67 Aligned_cols=325 Identities=15% Similarity=0.187 Sum_probs=245.0
Q ss_pred CCchHHHHHHHHHhhcCCeeEEEec--CeeEEEecCHHHHHHHHhhccccCCCcc--------h-h-------hhhhCCc
Q psy4821 55 LKGDAHISFKNLSAKYGSIFSTKLG--DQLIVVLSDYRHIREAFRKEEFSGRPHT--------E-L-------SSILGGY 116 (520)
Q Consensus 55 l~~~~~~~~~~~~~kyG~i~~~~~g--~~~~vvi~dp~~i~~i~~~~~~~~r~~~--------~-~-------~~~~~g~ 116 (520)
+..+|+.++.+++ +||||+++++| +.++++++||+++++++.++.|++++.. . . ...+.|.
T Consensus 18 ~~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 18 DIADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNRRLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HHHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCTTEESSCCCC---------------CHHHHHHTT
T ss_pred hhcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccccccccc
Confidence 3467899999986 59999999987 7889999999999999987777776531 0 0 0111122
Q ss_pred hHH-----------H---------HHHHHHH----HH-----HHhCCCCCChhHH-HHHHHHHHHHHHHhcccCCCCChH
Q psy4821 117 EVN-----------V---------FLKSLQA----QA-----ELCGATGVDVNPL-LATSISNVICSIVMSVRFSNEDPQ 166 (520)
Q Consensus 117 ~~~-----------~---------~~~~~~~----~~-----~l~~~~~~~l~~~-~~~~~~~~i~~~~fg~~~~~~~~~ 166 (520)
++. + -++.+++ .+ ++.....+|+... ...++.++++.+ ||.+.+.
T Consensus 97 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~-~G~~~~~---- 171 (425)
T 2z3t_A 97 WLVFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISAL-LGIPEED---- 171 (425)
T ss_dssp CGGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHH-HTCCGGG----
T ss_pred ccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH----
Confidence 222 0 0112222 22 2233347888764 467889999988 8876531
Q ss_pred HHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhH
Q psy4821 167 FKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRE 246 (520)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (520)
...+.+..+.... .
T Consensus 172 ~~~~~~~~~~~~~------~------------------------------------------------------------ 185 (425)
T 2z3t_A 172 HTWLRANAVALQE------A------------------------------------------------------------ 185 (425)
T ss_dssp HHHHHHHHHHHHT------T------------------------------------------------------------
T ss_pred HHHHHHHHHHHHh------h------------------------------------------------------------
Confidence 1122222111100 0
Q ss_pred HHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccc
Q psy4821 247 TRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENR 326 (520)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ 326 (520)
.+.+| ++.. ..++..++.+.+.+++.+.++++++. ...|+++.+++...+
T Consensus 186 --------------~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~~------ 235 (425)
T 2z3t_A 186 --------------STTRA----RDGR--GYARAEAASQEFTRYFRREVDRRGGD----DRDDLLTLLVRARDT------ 235 (425)
T ss_dssp --------------CTTCC----C-----HHHHHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHT------
T ss_pred --------------ccccC----CCHH--HHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhhcc------
Confidence 01112 1111 34566777888888888888877653 246899999976432
Q ss_pred ccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecc
Q psy4821 327 SDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVT 405 (520)
Q Consensus 327 ~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~ 405 (520)
+..+ +++++.+++.++++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+||++|+++ .++|.+.
T Consensus 236 -~~~l----s~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~~R~~~ 309 (425)
T 2z3t_A 236 -GSPL----SVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEELMRYDPPVQ-AVTRWAY 309 (425)
T ss_dssp -TCCC----CHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBC-EEEEEES
T ss_pred -CCCC----CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHHHHHhCCccc-CcceEeC
Confidence 1136 999999999999999999999999999999999999999999999877 99999999999999 5899999
Q ss_pred ccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHH
Q psy4821 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFST 485 (520)
Q Consensus 406 ~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ 485 (520)
+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.
T Consensus 310 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ 380 (425)
T 2z3t_A 310 EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA---------ERQVGFGLGIHYCLGATLARAEAEIGLRA 380 (425)
T ss_dssp SCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS---------SCCCTTCCSTTCCTTHHHHHHHHHHHHHH
T ss_pred CCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999995 25799999999999999999999999999
Q ss_pred HHhhc-ceecCCC
Q psy4821 486 LMHTF-GIESPPG 497 (520)
Q Consensus 486 ll~~f-~~~~~~~ 497 (520)
||++| +|+ .++
T Consensus 381 ll~~f~~~~-~~~ 392 (425)
T 2z3t_A 381 LLDGIPALG-RGA 392 (425)
T ss_dssp HHHHCGGGG-SSC
T ss_pred HHHhCCcCc-cCC
Confidence 99999 899 654
No 48
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=8.4e-49 Score=400.69 Aligned_cols=322 Identities=15% Similarity=0.183 Sum_probs=239.6
Q ss_pred CCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhcccc-C-CCcc--hhh-----hhhCCchHH-----
Q psy4821 55 LKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFS-G-RPHT--ELS-----SILGGYEVN----- 119 (520)
Q Consensus 55 l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~-~-r~~~--~~~-----~~~~g~~~~----- 119 (520)
+..+|+..+.+| ++||||+++++ |++++++++||+++++++.++.|+ + ++.. ... ....|.++.
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~ 92 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADA 92 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGGGGGHHHHHHHT
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCCcccccCccccccccccccCCchhhhhhhhHHHH
Confidence 456899999999 99999999998 899999999999999999877665 4 4321 101 000122221
Q ss_pred ---------------HHHHHHHHHH-----HHhC-CCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHH
Q psy4821 120 ---------------VFLKSLQAQA-----ELCG-ATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEG 177 (520)
Q Consensus 120 ---------------~~~~~~~~~~-----~l~~-~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~ 177 (520)
.+...+++.+ ++.. ++.+|+...+ ..++.++++. +||.+++. ...+.+.++..
T Consensus 93 ~~R~~~~~~fs~~~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~~~~~~ 167 (396)
T 1n40_A 93 GLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCK-VLGIPQED----GPKLFRSLSIA 167 (396)
T ss_dssp TCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGGG----HHHHHHTHHHH
T ss_pred HHHHHHHHhhChHHHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHH-HhCCChhh----HHHHHHHHHHH
Confidence 1111122222 1222 5567776544 3567777776 67765421 11111111110
Q ss_pred hhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhh
Q psy4821 178 FKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFET 257 (520)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (520)
.
T Consensus 168 ~------------------------------------------------------------------------------- 168 (396)
T 1n40_A 168 F------------------------------------------------------------------------------- 168 (396)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcH
Q psy4821 258 MAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHD 337 (520)
Q Consensus 258 ~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~ 337 (520)
... ...| .++..++...+ +++.+.++ +.+...|+++.+++.... ++ +..+ ++
T Consensus 169 ----~~~---~~~p-----~~~~~~~~~~~-~~~~~~i~------~~~~~~dll~~ll~~~~~--~~---~~~l----~~ 220 (396)
T 1n40_A 169 ----MSS---ADPI-----PAAKINWDRDI-EYMAGILE------NPNITTGLMGELSRLRKD--PA---YSHV----SD 220 (396)
T ss_dssp ----BCC---SSCC-----HHHHHHHHHHH-HHHHHHHH------CTTCCSHHHHHHHHHHTS--GG---GTTS----CH
T ss_pred ----ccc---cCCC-----HHHHHHHHHHH-HHHHHHHh------CCCCCCCHHHHHHHhhcc--cc---cCCC----CH
Confidence 000 0011 23445556666 77777666 122347899999976411 00 1136 99
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeC
Q psy4821 338 RQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIP 416 (520)
Q Consensus 338 ~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP 416 (520)
+++.+++.++++||+|||+++++|++++|++||++|+|+|+|++.+ +||+|+||++|+++..++|.+.+|++++||.||
T Consensus 221 ~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip 300 (396)
T 1n40_A 221 ELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVR 300 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHHHHHHHHHHHHhhCCCcccccceecCCCeeECCEEEC
Confidence 9999999999999999999999999999999999999999999877 999999999999996689999999999999999
Q ss_pred CCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecC
Q psy4821 417 KNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESP 495 (520)
Q Consensus 417 ~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~ 495 (520)
||+.|+++.+++||||++|+||++|+||||.+ ..++|||.|+|.|+|+++|.+|++++++.||++| ++++.
T Consensus 301 ~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~ 372 (396)
T 1n40_A 301 KGELVLVLLEGANFDPEHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372 (396)
T ss_dssp TTCEEEECHHHHHTCTTTSSSTTSCCTTCSST--------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred CCCEEEechHHhhCChhhCCChhhCCCCCCCC--------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCcccccc
Confidence 99999999999999999999999999999973 3589999999999999999999999999999999 59987
Q ss_pred CC
Q psy4821 496 PG 497 (520)
Q Consensus 496 ~~ 497 (520)
++
T Consensus 373 ~~ 374 (396)
T 1n40_A 373 VP 374 (396)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 49
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=3.9e-49 Score=406.52 Aligned_cols=198 Identities=18% Similarity=0.248 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhH
Q psy4821 276 TRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtt 355 (520)
..++..++.+.+.+++.+.++++++. ...|+++.+++...+ +..+ +++++.+++.++++||+|||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~~-------~~~l----~~~ei~~~~~~l~~AG~eTt 261 (421)
T 3lxh_A 197 QGRSLEAANKGFFEYVAPIIAARRGG----SGTDLITRILNVEID-------GKPM----PDDRALGLVSLLLLGGLDTV 261 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC----CCCSHHHHHHTSCBT-------TBCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHhhhcc-------CCCC----CHHHHHHHHHHHHHHhHHHH
Confidence 35677888889999999999888775 346899999865321 1136 99999999999999999999
Q ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCC
Q psy4821 356 KNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPEL 434 (520)
Q Consensus 356 a~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~ 434 (520)
+++++|++++|++||++|+||++|++.+ +||+|+||++|++ . ++|.+.+|++++||.||||+.|+++.+++||||++
T Consensus 262 a~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~ 339 (421)
T 3lxh_A 262 VNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVV-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRH 339 (421)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHHHHHHCCCB-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhcCcc-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhh
Confidence 9999999999999999999999999988 9999999999999 4 89999999999999999999999999999999999
Q ss_pred CCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCCCC
Q psy4821 435 WESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQP 499 (520)
Q Consensus 435 ~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~ 499 (520)
|+||++|+|||| +..++|||+|+|.|+|++||.+|++++++.||++| +|++.++.+
T Consensus 340 ~~dP~~F~PeR~---------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~ 396 (421)
T 3lxh_A 340 HDDPMTVDLSRR---------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAV 396 (421)
T ss_dssp SSSTTSCCTTCS---------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCC
T ss_pred CCCcCeeCCCCC---------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCC
Confidence 999999999995 35789999999999999999999999999999999 999986643
No 50
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-48 Score=398.77 Aligned_cols=319 Identities=19% Similarity=0.240 Sum_probs=246.9
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcchhhhhhCCchHH---------------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTELSSILGGYEVN--------------- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~~~g~~~~--------------- 119 (520)
..+|+.++.++++ ||||| +++. ++++++||+++++++.++ .|++++... .....+.++.
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~--~~~~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~-~~~~~~~~l~~~~g~~h~~~R~~~~ 91 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVF--RDRN-GLAAASTYQAVIDAERQPELFSNAGGIR-PDQPALPMMIDMDDPAHLLRRKLVN 91 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEE--ECTT-CCEEECSHHHHHHHHTCTTTEESTTCSS-TTSCCCSSGGGCCTTHHHHHHHHHG
T ss_pred ccChhHHHHHHHh-cCCee--ecCC-CeEEEecHHHHHHHHhCcccccCccccC-CcccccccccccCchHHHHHHHHhh
Confidence 4689999999987 99999 4554 789999999999999887 687765432 1111222222
Q ss_pred ---------HHHHHHHHHH-----HHhCCCCCChh-HHHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhc
Q psy4821 120 ---------VFLKSLQAQA-----ELCGATGVDVN-PLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETM 184 (520)
Q Consensus 120 ---------~~~~~~~~~~-----~l~~~~~~~l~-~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (520)
.+...+++.+ ++..+..+|+. .+...++.++++.+ ||.+.+. ...+.+..+.....
T Consensus 92 ~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~----~~~~~~~~~~~~~~---- 162 (398)
T 2xkr_A 92 AGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDM-LGVRPEQ----RDMFLRWSDDLVTF---- 162 (398)
T ss_dssp GGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG----HHHHHHHHHHHHHH----
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH----HHHHHHHHHHHHhc----
Confidence 1112222222 12334468888 55567999999998 9986532 12222222211100
Q ss_pred hhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhccc
Q psy4821 185 AVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFL 264 (520)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (520)
..
T Consensus 163 ------------------------------------------------------------------------------~~ 164 (398)
T 2xkr_A 163 ------------------------------------------------------------------------------LS 164 (398)
T ss_dssp ------------------------------------------------------------------------------HT
T ss_pred ------------------------------------------------------------------------------cC
Confidence 01
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHH
Q psy4821 265 PFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQII 344 (520)
Q Consensus 265 P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~ 344 (520)
|. ++| ...++..++...+.+++.+.++++++. ...|+++.+++... .+..+ +++++.+++
T Consensus 165 ~~--~~p---~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~-------~~~~l----s~~ei~~~~ 224 (398)
T 2xkr_A 165 SH--VSQ---EDFQITMDAFAAYNDFTRATIAARRAD----PTDDLVSVLVSSEV-------DGERL----SDDELVMET 224 (398)
T ss_dssp SC--CCH---HHHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCCB-------TTBCC----CHHHHHHHH
T ss_pred cc--cch---hhHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhhc-------cCCCC----CHHHHHHHH
Confidence 11 111 135566777888889999999888763 24689999986532 11136 999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEe
Q psy4821 345 GDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVP 423 (520)
Q Consensus 345 ~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~ 423 (520)
.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++. ++|.+.+|++++||.||||+.|++
T Consensus 225 ~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~ 303 (398)
T 2xkr_A 225 LLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPSLLPGAIEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMML 303 (398)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEE
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEe
Confidence 999999999999999999999999999999999999977 999999999999997 899999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCC
Q psy4821 424 LLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPP 496 (520)
Q Consensus 424 ~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~ 496 (520)
+.+++||||++|+||++|+||||.+ .++|||.|+|.|+|++||.+|++++++.||++| ++++..
T Consensus 304 ~~~~~~rdp~~~~dP~~F~PeR~~~---------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 368 (398)
T 2xkr_A 304 LFESANFDEAVFCEPEKFDVQRNPN---------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVA 368 (398)
T ss_dssp EHHHHHTCTTTSSSTTSCCTTCSSC---------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESC
T ss_pred ChhhhcCChhhCCCCCeeCCCCCCC---------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECC
Confidence 9999999999999999999999852 389999999999999999999999999999999 599864
No 51
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=2.8e-49 Score=405.86 Aligned_cols=320 Identities=16% Similarity=0.218 Sum_probs=241.9
Q ss_pred ccCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCc---ch----hhh--------hh--C
Q psy4821 53 PFLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPH---TE----LSS--------IL--G 114 (520)
Q Consensus 53 ~~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~---~~----~~~--------~~--~ 114 (520)
+.+..+|+..+.+| ++||||+++++ |+.++++++||+++++++.++.|++++. .. ... .+ .
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD 98 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTTEECCTTSTTCCCCC---------CCTTTTCC
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCCcccccccccccccccCCccccccccccccCC
Confidence 45567899999999 89999999998 8999999999999999998765544432 11 000 00 1
Q ss_pred CchHH----------------HHHHHHHHHH-----HH-hCCCCCChhHHHH-HHHHHHHHHHHhcccCCCCChHHHHHH
Q psy4821 115 GYEVN----------------VFLKSLQAQA-----EL-CGATGVDVNPLLA-TSISNVICSIVMSVRFSNEDPQFKRFM 171 (520)
Q Consensus 115 g~~~~----------------~~~~~~~~~~-----~l-~~~~~~~l~~~~~-~~~~~~i~~~~fg~~~~~~~~~~~~~~ 171 (520)
|.... .+...+++.+ ++ ..++.+|+...+. .++.++++. +||.+.+. ...+.
T Consensus 99 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~ 173 (408)
T 3abb_A 99 DPVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGD----HDFFE 173 (408)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG----HHHHH
T ss_pred chHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH----HHHHH
Confidence 11111 1111222222 22 2356788887765 477888886 68875431 11222
Q ss_pred HHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHH
Q psy4821 172 HLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTL 251 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (520)
+.++...
T Consensus 174 ~~~~~~~------------------------------------------------------------------------- 180 (408)
T 3abb_A 174 ECSRNFV------------------------------------------------------------------------- 180 (408)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHHh-------------------------------------------------------------------------
Confidence 2111100
Q ss_pred HHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccc
Q psy4821 252 SKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLF 331 (520)
Q Consensus 252 ~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l 331 (520)
.. + . . ++..++.+.+.+++.+.++++++.. ..|+++.+++...+ +..+
T Consensus 181 ----------~~-~-------~--~-~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~-------~~~l 228 (408)
T 3abb_A 181 ----------GA-A-------T--S-AEADAAFGELYTYLHGLVGRKQAEP----EDGLLDELIARQLE-------EGDL 228 (408)
T ss_dssp ---------------------------CCSSHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHHT-------SSSC
T ss_pred ----------cc-c-------c--h-HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhcccC-------CCCC
Confidence 00 0 0 0 1223345566777778888777642 36899999976431 1136
Q ss_pred cCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecccccee
Q psy4821 332 NGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKF 410 (520)
Q Consensus 332 ~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l 410 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ .++|.+.+|+++
T Consensus 229 ----s~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~ 303 (408)
T 3abb_A 229 ----DHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSGVVEELLRFTSVSD-HIVRMAKEDIEV 303 (408)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHHHHHHHHHHHHHHHCSSC-EEEEEESSCEEE
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHHHhcCccc-ccceEeCCCeEE
Confidence 999999999999999999999999999999999999999999999877 99999999999999 599999999999
Q ss_pred cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy4821 411 NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490 (520)
Q Consensus 411 ~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f 490 (520)
+||.|||||.|+++.+++||||++|+||++|+|||| +..++|||+|+|.|+|++||.+|++++++.||++|
T Consensus 304 ~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f 374 (408)
T 3abb_A 304 GGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN---------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARI 374 (408)
T ss_dssp TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC---------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC---------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999996 23689999999999999999999999999999999
Q ss_pred -ceecCCC
Q psy4821 491 -GIESPPG 497 (520)
Q Consensus 491 -~~~~~~~ 497 (520)
++++..+
T Consensus 375 ~~~~~~~~ 382 (408)
T 3abb_A 375 PGLRLAVP 382 (408)
T ss_dssp TTCEESSC
T ss_pred ccceecCC
Confidence 8998643
No 52
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=5.6e-49 Score=403.89 Aligned_cols=322 Identities=17% Similarity=0.196 Sum_probs=247.1
Q ss_pred cCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCC-cchhh------h---h---hC-CchH
Q psy4821 54 FLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRP-HTELS------S---I---LG-GYEV 118 (520)
Q Consensus 54 ~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~-~~~~~------~---~---~~-g~~~ 118 (520)
.+..+|+..+.+| ++||||+++++ |+.++++++||+++++++.++.+++++ ..... . . .. +.++
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCccccCcccccccccccCCcccchhhhhcccccc
Confidence 4556899999999 99999999998 899999999999999999987554443 11100 0 0 01 2222
Q ss_pred H------------------------HHHHHHHHHH-----HHh-CCCCCChhHHHH-HHHHHHHHHHHhcccCCCCChHH
Q psy4821 119 N------------------------VFLKSLQAQA-----ELC-GATGVDVNPLLA-TSISNVICSIVMSVRFSNEDPQF 167 (520)
Q Consensus 119 ~------------------------~~~~~~~~~~-----~l~-~~~~~~l~~~~~-~~~~~~i~~~~fg~~~~~~~~~~ 167 (520)
. .+...+++.+ ++. .++.+|+...+. .++.++++. +||.+.+. .
T Consensus 93 ~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~ 167 (411)
T 1gwi_A 93 LTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR----L 167 (411)
T ss_dssp GGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG----H
T ss_pred ccCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHH----H
Confidence 2 1112222222 123 456788887765 478888885 68875421 1
Q ss_pred HHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHH
Q psy4821 168 KRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRET 247 (520)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (520)
..+.+.+....
T Consensus 168 ~~~~~~~~~~~--------------------------------------------------------------------- 178 (411)
T 1gwi_A 168 PRLKVLFEKFF--------------------------------------------------------------------- 178 (411)
T ss_dssp HHHHHHHHHHH---------------------------------------------------------------------
T ss_pred HHHHHHHHHHh---------------------------------------------------------------------
Confidence 12222111100
Q ss_pred HHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccc
Q psy4821 248 RKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRS 327 (520)
Q Consensus 248 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~ 327 (520)
.. .. ..++..++...+.+++.+.++++++. ...|+++.+++...+
T Consensus 179 --------------~~-------~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~------- 223 (411)
T 1gwi_A 179 --------------ST-------QT---PPEEVVATLTELASIMTDTVAAKRAA----PGDDLTSALIQASEN------- 223 (411)
T ss_dssp --------------CT-------TS---CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCCBT-------
T ss_pred --------------cc-------CC---ChHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhccc-------
Confidence 00 00 12345567777888888888887764 236899999865311
Q ss_pred cccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccc
Q psy4821 328 DQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTR 406 (520)
Q Consensus 328 ~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~ 406 (520)
+..+ +++++.+++.++++||+|||+++++|++++|++||++|+||++|+..+ +||+|+||++|+++.+++|.+.+
T Consensus 224 ~~~l----~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~ 299 (411)
T 1gwi_A 224 GDHL----TDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAE 299 (411)
T ss_dssp TBCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESS
T ss_pred CCCC----CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcChHHHHHHHHHHHHhCCcccCCceeeeCC
Confidence 1136 999999999999999999999999999999999999999999998766 99999999999999768999999
Q ss_pred cceecCeeeCCCCEEEecccccccCCCCC-CCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHH
Q psy4821 407 DVKFNGFTIPKNTQIVPLLHAVHMDPELW-ESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFST 485 (520)
Q Consensus 407 d~~l~g~~iP~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ 485 (520)
|++++||.||||+.|+++.+++||||++| +||++|+||||.+ ..++|||+|+|.|+|++||.+|++++++.
T Consensus 300 d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~--------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ 371 (411)
T 1gwi_A 300 DVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG--------NRHISFGHGPHVCPGAALSRMEAGVALPA 371 (411)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--------SCCCTTCCSTTCCTTHHHHHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--------CCcccCCCCcccCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 9999999999952 46899999999999999999999999999
Q ss_pred HHhhc-ceecCCC
Q psy4821 486 LMHTF-GIESPPG 497 (520)
Q Consensus 486 ll~~f-~~~~~~~ 497 (520)
||++| ++++..+
T Consensus 372 ll~~f~~~~~~~~ 384 (411)
T 1gwi_A 372 LYARFPHLDLAVP 384 (411)
T ss_dssp HHHHCTTCEESSC
T ss_pred HHHhCccceeCCC
Confidence 99999 7998643
No 53
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=3.8e-49 Score=407.93 Aligned_cols=339 Identities=17% Similarity=0.216 Sum_probs=250.5
Q ss_pred CCCCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEE--------ecCeeEEEecCHHHHHHHHhhc-cccCCCcc
Q psy4821 37 RSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTK--------LGDQLIVVLSDYRHIREAFRKE-EFSGRPHT 107 (520)
Q Consensus 37 ~~~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~--------~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~ 107 (520)
-..||+|.+++++.......++|+..+.++ ++||||+++. +|+.++++++|+++++++++++ .|++++..
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~~~ 95 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENG 95 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTTTC
T ss_pred cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCccc
Confidence 356777777887765444356799999999 7899999998 5668899999999999999877 68776543
Q ss_pred hhhh----------hhCCchHH------------------------HHHHHHHHHH-----HHhCCCCCChhHHH-HHHH
Q psy4821 108 ELSS----------ILGGYEVN------------------------VFLKSLQAQA-----ELCGATGVDVNPLL-ATSI 147 (520)
Q Consensus 108 ~~~~----------~~~g~~~~------------------------~~~~~~~~~~-----~l~~~~~~~l~~~~-~~~~ 147 (520)
.... ...+.++. .+...+++.+ ++..+..+|+...+ ..++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~ 175 (433)
T 3ivy_A 96 VIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVSCELP 175 (433)
T ss_dssp SCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHHHHTTSHHH
T ss_pred ccccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHHHHHHHHHH
Confidence 2211 01122222 1112222222 22345567887776 8888
Q ss_pred HHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhh
Q psy4821 148 SNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFE 227 (520)
Q Consensus 148 ~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (520)
.++++.+ ||.+. ++...+.+..+....
T Consensus 176 ~~vi~~l-~G~~~----~~~~~~~~~~~~~~~------------------------------------------------ 202 (433)
T 3ivy_A 176 LQAIAGL-LGVPQ----EDRGKLFHWSNEMTG------------------------------------------------ 202 (433)
T ss_dssp HHHHHHH-HTCCH----HHHHHHHHHHTTCSC------------------------------------------------
T ss_pred HHHHHHH-cCCCH----HHHHHHHHHHHHHhc------------------------------------------------
Confidence 8888885 77521 111122111110000
Q ss_pred hhhhhccccccccccchhHHHHHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q psy4821 228 TMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNI 307 (520)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 307 (520)
...|... ..+..++...+.+++.+.+++++++ ..
T Consensus 203 ----------------------------------~~~p~~~--------~~~~~~~~~~~~~~~~~~i~~r~~~----~~ 236 (433)
T 3ivy_A 203 ----------------------------------NEDPEYA--------HIDPKASSAELIGYAMKMAEEKAKN----PA 236 (433)
T ss_dssp ----------------------------------CCCGGGT--------TCCHHHHHHHHHHHHHHHHHHC---------
T ss_pred ----------------------------------cCCchhh--------hHHHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 1112110 0134456677888888888887754 24
Q ss_pred chhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhHhHHH
Q psy4821 308 RDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL 387 (520)
Q Consensus 308 ~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~a~i~ 387 (520)
.|+++.+++...+ +..+ +++++.+++..+++||+|||+++++|++++|++||++|++|++|++ -+||+
T Consensus 237 ~dll~~ll~~~~~-------~~~l----s~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-~a~i~ 304 (433)
T 3ivy_A 237 DDIVTQLIQADID-------GEKL----SDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-ETAAD 304 (433)
T ss_dssp --CHHHHHSCC---------CCCC----CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-TTHHH
T ss_pred CcHHHHHHhhhcC-------CCCC----CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-cchhH
Confidence 6899999865321 1136 9999999999999999999999999999999999999999999998 68999
Q ss_pred hhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccC-CCC
Q psy4821 388 ETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFG-VGR 466 (520)
Q Consensus 388 E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG-~G~ 466 (520)
|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++||| +|+
T Consensus 305 E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~---------~~~l~FGg~G~ 374 (433)
T 3ivy_A 305 EIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP---------NPHVGFGGTGA 374 (433)
T ss_dssp HHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---------CCCCTTCSSST
T ss_pred HHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC---------CCCCCCCCCCC
Confidence 99999999998 799999999999999999999999999999999999999999999993 3589999 999
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcc-eecCCC
Q psy4821 467 RMCLGDVLARMELFLFFSTLMHTFG-IESPPG 497 (520)
Q Consensus 467 r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~ 497 (520)
|.|+|++||.+|++++++.|+++|+ +++..+
T Consensus 375 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 406 (433)
T 3ivy_A 375 HYCIGANLARMTINLIFNAVADHMPDLKPISA 406 (433)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCccEECCC
Confidence 9999999999999999999999999 998754
No 54
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=3.3e-49 Score=403.90 Aligned_cols=196 Identities=21% Similarity=0.329 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHH
Q psy4821 280 LSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTL 359 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl 359 (520)
..++.+.+.+++.+.++++++. ...|+++.+++...+ +..+ +++++.+++..+++||+|||++++
T Consensus 179 ~~~~~~~~~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~-------~~~l----~~~el~~~~~~l~~AG~dTta~~l 243 (396)
T 3oft_A 179 VEQLKQAADDYLWPFIEKRMAQ----PGDDLFSRILSEPVG-------GRPW----TVDEARRMCRNLLFGGLDTVAAMI 243 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHTSCBT-------TBCC----CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhhcc-------CCCC----CHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4566677888888888888775 346899999865321 1136 999999999999999999999999
Q ss_pred HHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCC
Q psy4821 360 QWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESP 438 (520)
Q Consensus 360 ~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p 438 (520)
+|++++|++||++|+||++|++.+ +||+|+||++|++ . ++|.+.+|++++||.||||+.|+++.+++||||++|+||
T Consensus 244 ~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp 321 (396)
T 3oft_A 244 GMVALHLARHPEDQRLLRERPDLIPAAADELMRRYPTV-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAP 321 (396)
T ss_dssp HHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHCCCB-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSST
T ss_pred HHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHHHhcCcc-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCc
Confidence 999999999999999999999988 9999999999999 4 899999999999999999999999999999999999999
Q ss_pred CCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCCCC
Q psy4821 439 EDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQP 499 (520)
Q Consensus 439 ~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~ 499 (520)
++|+||||++ +..++|||+|+|.|+|++||.+|++++++.||++| ++++.++++
T Consensus 322 ~~F~PeR~~~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~ 376 (396)
T 3oft_A 322 EEVRFDRGLA-------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKA 376 (396)
T ss_dssp TSCCSCCCCC-------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSC
T ss_pred CccCCCCCCC-------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCC
Confidence 9999999973 35789999999999999999999999999999999 999986644
No 55
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=3.9e-48 Score=398.68 Aligned_cols=327 Identities=20% Similarity=0.314 Sum_probs=249.6
Q ss_pred CCchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCc-----ch-h--hhhhC---CchHH----
Q psy4821 55 LKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPH-----TE-L--SSILG---GYEVN---- 119 (520)
Q Consensus 55 l~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~-----~~-~--~~~~~---g~~~~---- 119 (520)
+..+|+..+.+| ++||||++ + ++.++++++||+++++++.++.|++++. .. . ...+. +.++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 100 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGLFGLPP 100 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSCH
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCCccccccccccccccccccchhhhhcccccccCCc
Confidence 456899999999 78999998 5 7788999999999999999877777761 11 1 01111 11121
Q ss_pred --------------------HHHHHHHHHH-----HHhCCCCCChhH-HHHHHHHHHHHHHHhcccCCCCChHHHHHHHH
Q psy4821 120 --------------------VFLKSLQAQA-----ELCGATGVDVNP-LLATSISNVICSIVMSVRFSNEDPQFKRFMHL 173 (520)
Q Consensus 120 --------------------~~~~~~~~~~-----~l~~~~~~~l~~-~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~ 173 (520)
.+...+++.+ ++..+..+|+.. +...++.++++.+ ||.+.+. ...+.+.
T Consensus 101 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~----~~~~~~~ 175 (419)
T 1q5d_A 101 EDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISAL-LKVPAEC----DEKFRRF 175 (419)
T ss_dssp HHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHH-TTCCGGG----HHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hCCCHHH----HHHHHHH
Confidence 1112222222 223334688775 4477889999887 8876532 1122222
Q ss_pred HHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHH
Q psy4821 174 IDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSK 253 (520)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (520)
.+......
T Consensus 176 ~~~~~~~~------------------------------------------------------------------------ 183 (419)
T 1q5d_A 176 GSATARAL------------------------------------------------------------------------ 183 (419)
T ss_dssp HHHHHHHT------------------------------------------------------------------------
T ss_pred HHHHHHhc------------------------------------------------------------------------
Confidence 22111100
Q ss_pred HHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcc-hhHHHHHHHHHHHhhccccccccc
Q psy4821 254 LFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIR-DMLDSYLFEIEKAKMENRSDQLFN 332 (520)
Q Consensus 254 ~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-d~l~~ll~~~~~~~~~~~~~~~l~ 332 (520)
. ...+|+. +. ..++..++...+.+++.+.++++++. ... |+++.+++...+ +..+
T Consensus 184 -----~-~~~~P~~---~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~~dll~~ll~~~~~-------~~~l- 239 (419)
T 1q5d_A 184 -----G-VGLVPRV---DE---ETKTLVASVTEGLALLHGVLDERRRN----PLENDVLTMLLQAEAD-------GSRL- 239 (419)
T ss_dssp -----T-TTTSSCC---CS---CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSCHHHHHHHHHHS-------STTC-
T ss_pred -----c-cccccCC---hH---HHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCCHHHHHHhhhcc-------CCCC-
Confidence 0 0223422 11 24566778888899999999888764 235 899999976421 1136
Q ss_pred CCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceec
Q psy4821 333 GKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFN 411 (520)
Q Consensus 333 ~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~ 411 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++..++|.+.+|++++
T Consensus 240 ---~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~ 316 (419)
T 1q5d_A 240 ---STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYC 316 (419)
T ss_dssp ---CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEET
T ss_pred ---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCccccccceeeCCCeEEC
Confidence 999999999999999999999999999999999999999999998877 9999999999999966899999999999
Q ss_pred CeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-
Q psy4821 412 GFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF- 490 (520)
Q Consensus 412 g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f- 490 (520)
||.||+|+.|+++.+++||||++|+||++|+|||| +..++|||+|+|.|+|++||.+|++++++.||++|
T Consensus 317 G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~---------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~ 387 (419)
T 1q5d_A 317 GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFP 387 (419)
T ss_dssp TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC---------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCT
T ss_pred CEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC---------CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999994 13589999999999999999999999999999999
Q ss_pred ceecCCC
Q psy4821 491 GIESPPG 497 (520)
Q Consensus 491 ~~~~~~~ 497 (520)
++++.++
T Consensus 388 ~~~~~~~ 394 (419)
T 1q5d_A 388 EMKLKET 394 (419)
T ss_dssp TCEECSC
T ss_pred CeEECCC
Confidence 8998764
No 56
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=2.2e-48 Score=402.85 Aligned_cols=333 Identities=17% Similarity=0.209 Sum_probs=249.4
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhc-cccCCCcchhhhhhCCc-hHH--------------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTELSSILGGY-EVN-------------- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~~~g~-~~~-------------- 119 (520)
..+|+.++.++ ++||||+++..++ +++++||+++++++.++ .|++++.........|. ++.
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~ 128 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIV 128 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCCCCSCC-------------CCHHHH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcccccccccccccccccCCCccccCCcHHHHHHHHHH
Confidence 45788888887 6899999877666 79999999999999987 67776544332222222 122
Q ss_pred ----------HHHHHHHHHH-----HHhCCCCCChh-HHHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhh
Q psy4821 120 ----------VFLKSLQAQA-----ELCGATGVDVN-PLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFET 183 (520)
Q Consensus 120 ----------~~~~~~~~~~-----~l~~~~~~~l~-~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (520)
.+...+++.+ .+..+..+|+. .+...++.++++. +||.+.. +...+.+..+......
T Consensus 129 ~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~----~~~~~~~~~~~~~~~~-- 201 (441)
T 3nc3_A 129 VRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMD-MLGLDKR----DHEKISEWHSGVADFI-- 201 (441)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHH-HTTCCGG----GHHHHHHHHHHHHHHH--
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHH----HHHHHHHHHHHHHHhc--
Confidence 1112222222 22445567764 4445678888887 5786542 1222222222211110
Q ss_pred chhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhcc
Q psy4821 184 MAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNF 263 (520)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (520)
..
T Consensus 202 ------------------------------------------------------------------------------~~ 203 (441)
T 3nc3_A 202 ------------------------------------------------------------------------------TS 203 (441)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHH
Q psy4821 264 LPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQI 343 (520)
Q Consensus 264 ~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~ 343 (520)
+. .+. ...+...++.+.+.+++.+.++++++. ...|+++.+++...+. ..+ +++++.++
T Consensus 204 ~~----~~~--~~~~~~~~~~~~l~~~~~~~i~~rr~~----~~~Dll~~Ll~~~~~~-------~~l----s~~el~~~ 262 (441)
T 3nc3_A 204 IS----QSP--EARAHSLWCSEQLSQYLMPVIKERRVN----PGSDLISILCTSEYEG-------MAL----SDKDILAL 262 (441)
T ss_dssp SC----CCH--HHHHHHHHHHHHHHHHHHHHHHHHTTS----CCSSHHHHHCC-------------CC----CHHHHHHH
T ss_pred cc----CCh--HHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhhccC-------CCC----CHHHHHHH
Confidence 00 010 134556677788889999999888763 3468999998764321 136 99999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEE
Q psy4821 344 IGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIV 422 (520)
Q Consensus 344 ~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~ 422 (520)
+..+++||+|||+++++|++++|++||++|++|++|+..+ +||+|+||++|+++. ++|.+.+|++++||.||||+.|+
T Consensus 263 ~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~ 341 (441)
T 3nc3_A 263 ILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVF 341 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGGHHHHHHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEE
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEE
Confidence 9999999999999999999999999999999999999887 999999999999998 89999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccCCccCCCCCCc-cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCCC
Q psy4821 423 PLLHAVHMDPELWESPEDFRPTRFLTPEGKV-TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQ 498 (520)
Q Consensus 423 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~ 498 (520)
++.+++||||++|+||++|+||||++..... ..+..++|||.|+|.|+|++||.+|++++++.||++| +|++.++.
T Consensus 342 ~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~ 419 (441)
T 3nc3_A 342 CMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF 419 (441)
T ss_dssp EEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC
T ss_pred echHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC
Confidence 9999999999999999999999997654332 2257899999999999999999999999999999999 99997653
No 57
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=4.7e-48 Score=395.43 Aligned_cols=195 Identities=21% Similarity=0.320 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhH
Q psy4821 276 TRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtt 355 (520)
..++..++.+.+.+++.+.++++++.. ..|+++.+++.... ++ + +++++.+++.++++||+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~-------~~-l----s~~ei~~~~~~~~~AG~~Tt 238 (397)
T 3buj_A 175 DMRRGHAAIAEFADYVERALARRRREG----GEDLLALMLDAHDR-------GL-M----SRNEIVSTVVTFIFTGHETV 238 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC----CCSHHHHHHHHHHT-------TS-S----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCHHHHHHHhhhc-------CC-C----CHHHHHHHHHHHHHcCchHH
Confidence 345667778888999999998887652 36899999976421 11 5 99999999999999999999
Q ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCC
Q psy4821 356 KNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPEL 434 (520)
Q Consensus 356 a~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~ 434 (520)
+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++
T Consensus 239 ~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~ 317 (397)
T 3buj_A 239 ASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRR 317 (397)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTT
T ss_pred HHHHHHHHHHHHhCHHHHHHHhhCHHHHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccc
Confidence 9999999999999999999999999877 99999999999999 589999999999999999999999999999999999
Q ss_pred CCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 435 WESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 435 ~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.| ++| ++++.++
T Consensus 318 ~~dp~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~ 371 (397)
T 3buj_A 318 YDRPDDFDIERDP---------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCA 371 (397)
T ss_dssp CSSTTSCCTTSCC---------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSC
T ss_pred cCCccccCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCC
Confidence 9999999999995 347999999999999999999999999999 999 8999765
No 58
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.2e-48 Score=402.83 Aligned_cols=328 Identities=17% Similarity=0.207 Sum_probs=247.8
Q ss_pred HHHHHHHHHhhcCCee--EEE-ecCeeEEEecCHHHHHHHHhhc-cccCCCcchhhhh----------h-----CCchHH
Q psy4821 59 AHISFKNLSAKYGSIF--STK-LGDQLIVVLSDYRHIREAFRKE-EFSGRPHTELSSI----------L-----GGYEVN 119 (520)
Q Consensus 59 ~~~~~~~~~~kyG~i~--~~~-~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~----------~-----~g~~~~ 119 (520)
|+..+.++ ++||||+ ++. +|+.++++|+++++++++++++ .|++++....... . .+.++.
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~ 125 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLV 125 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccCcc
Confidence 99999999 6799999 888 7889999999999999999887 7877764322100 0 011121
Q ss_pred ------------------------HHHHHHHHHH-----HHhC-CCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHH
Q psy4821 120 ------------------------VFLKSLQAQA-----ELCG-ATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFK 168 (520)
Q Consensus 120 ------------------------~~~~~~~~~~-----~l~~-~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~ 168 (520)
.+...+++.+ ++.. ++.+|+...+ ..++.++++.+ ||.+.. +..
T Consensus 126 ~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~----~~~ 200 (450)
T 3tkt_A 126 QMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPE----DEP 200 (450)
T ss_dssp GCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGG----GHH
T ss_pred cCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChh----HHH
Confidence 1112222222 2233 7789988777 68899999985 886432 222
Q ss_pred HHHHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHH
Q psy4821 169 RFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETR 248 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (520)
.+.+..+........
T Consensus 201 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 215 (450)
T 3tkt_A 201 KMLFLTQQMFGGQDE----------------------------------------------------------------- 215 (450)
T ss_dssp HHHHHHHTTSCCC-------------------------------------------------------------------
T ss_pred HHHHHHHHHhccccc-----------------------------------------------------------------
Confidence 333332221110000
Q ss_pred HHHHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccc
Q psy4821 249 KTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSD 328 (520)
Q Consensus 249 ~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~ 328 (520)
..+++..++.......++..++...+.+++.+.+++++++. ..|+++.+++... .+
T Consensus 216 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~-------~~ 271 (450)
T 3tkt_A 216 -------------DMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP----TDDVATVIANAVV-------DG 271 (450)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTCEE-------TT
T ss_pred -------------hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhccc-------cC
Confidence 11121111111111456777888889999999999887642 3689998886432 11
Q ss_pred ccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecccc
Q psy4821 329 QLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRD 407 (520)
Q Consensus 329 ~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d 407 (520)
..+ +++++.+++..+++||+|||+++++|++++|++||++|+|||+|++.+ +||+|+||++|+++. ++|.+.+|
T Consensus 272 ~~l----s~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~-~~R~~~~d 346 (450)
T 3tkt_A 272 EPM----SDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQH-FMRTAATD 346 (450)
T ss_dssp EEC----CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCE-EEEEESSS
T ss_pred CCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHHHHHHHHHHHHHhCCCccC-cceeeCCC
Confidence 136 999999999999999999999999999999999999999999999888 999999999999995 89999999
Q ss_pred ceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHH
Q psy4821 408 VKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLM 487 (520)
Q Consensus 408 ~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll 487 (520)
++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||
T Consensus 347 ~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll 417 (450)
T 3tkt_A 347 TELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA---------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLL 417 (450)
T ss_dssp EEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT---------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred eeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC---------CCCCCCCCcCccCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999952 3589999999999999999999999999999
Q ss_pred hhcc-eecC
Q psy4821 488 HTFG-IESP 495 (520)
Q Consensus 488 ~~f~-~~~~ 495 (520)
++|+ +++.
T Consensus 418 ~~f~~~~l~ 426 (450)
T 3tkt_A 418 DRVDSLELA 426 (450)
T ss_dssp HHEEEEEES
T ss_pred HhCCCceeC
Confidence 9998 6665
No 59
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=4.5e-48 Score=396.91 Aligned_cols=317 Identities=15% Similarity=0.185 Sum_probs=244.3
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecC--eeEEEecCHHHHHHHHhhccccCCCcch----hhhhh-C--CchHH-------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGD--QLIVVLSDYRHIREAFRKEEFSGRPHTE----LSSIL-G--GYEVN------- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~--~~~vvi~dp~~i~~i~~~~~~~~r~~~~----~~~~~-~--g~~~~------- 119 (520)
+++||..+.+++ +||||+++++++ +++++++||+++++++.++.|++++... ....+ + +.++.
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 104 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDPRFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDH 104 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCTTEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHH
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCCCcccCCCCCCCccccccchhccccccccCCchHH
Confidence 456779999997 899999999764 7899999999999999876665543221 01111 0 22222
Q ss_pred -----------------HHHHHHHHHH-----HH-hCCCCCChhHHHH-HHHHHHHHHHHhcccCCCCChHHHHHHHHHH
Q psy4821 120 -----------------VFLKSLQAQA-----EL-CGATGVDVNPLLA-TSISNVICSIVMSVRFSNEDPQFKRFMHLID 175 (520)
Q Consensus 120 -----------------~~~~~~~~~~-----~l-~~~~~~~l~~~~~-~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~ 175 (520)
.+...+++.+ ++ ..++.+|+...+. .++.++++. +||.+++. ...+.+.++
T Consensus 105 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~----~~~~~~~~~ 179 (411)
T 2dkk_A 105 NRLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAAD----RERVHSWTR 179 (411)
T ss_dssp HHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH----HHHHHHHHG
T ss_pred HHHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH----HHHHHHHHH
Confidence 1112222222 22 2345789886664 688999988 58876541 111111110
Q ss_pred HHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHH
Q psy4821 176 EGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLF 255 (520)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (520)
. +.
T Consensus 180 ~---------~~-------------------------------------------------------------------- 182 (411)
T 2dkk_A 180 Q---------II-------------------------------------------------------------------- 182 (411)
T ss_dssp G---------GC--------------------------------------------------------------------
T ss_pred H---------HH--------------------------------------------------------------------
Confidence 0 00
Q ss_pred hhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCC
Q psy4821 256 ETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKN 335 (520)
Q Consensus 256 ~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~ 335 (520)
..++ ..++..++...+.+++.+.++++++. ...|+++.+++. .+ + ..+
T Consensus 183 ------~~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~----~~~dll~~ll~~-~~-~------~~l---- 230 (411)
T 2dkk_A 183 ------STSG----------GAEAAERAKRGLYGWITETVRARAGS----EGGDVYSMLGAA-VG-R------GEV---- 230 (411)
T ss_dssp ------SSCS----------CSHHHHHHHHHHHHHHHHHHHTTTTC----CSSCHHHHHHHH-HH-T------TSS----
T ss_pred ------hccc----------hHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHh-cC-C------CCC----
Confidence 1111 12345567778888888888887764 235899999976 22 1 136
Q ss_pred cHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCcccc-ceeeccccceecCe
Q psy4821 336 HDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALG-TIHAVTRDVKFNGF 413 (520)
Q Consensus 336 ~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~-~~R~~~~d~~l~g~ 413 (520)
+++++.+++.++++|| |||+++++|++++|++||++|++|++|++.+ +||+|+||++|+++.. ++|.+.+|++++||
T Consensus 231 s~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~ 309 (411)
T 2dkk_A 231 GETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGT 309 (411)
T ss_dssp CTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTTCCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTE
T ss_pred CHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHhhCCccccCccceEECCCEEECCE
Confidence 9999999999999999 9999999999999999999999999999877 9999999999999966 79999999999999
Q ss_pred eeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ce
Q psy4821 414 TIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GI 492 (520)
Q Consensus 414 ~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~ 492 (520)
.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.|+++| ++
T Consensus 310 ~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~ 380 (411)
T 2dkk_A 310 RIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP---------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGL 380 (411)
T ss_dssp EECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTC
T ss_pred EECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC---------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999995 3589999999999999999999999999999999 99
Q ss_pred ecCCC
Q psy4821 493 ESPPG 497 (520)
Q Consensus 493 ~~~~~ 497 (520)
++.++
T Consensus 381 ~l~~~ 385 (411)
T 2dkk_A 381 RLAVP 385 (411)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 98765
No 60
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=1.6e-47 Score=389.71 Aligned_cols=314 Identities=16% Similarity=0.200 Sum_probs=244.2
Q ss_pred CCchHHHHHHHHHhhcCCeeEEEecC----eeEEEecCHHHHHHHHhhc-cccCCCcchhhhh--hCCchHH--------
Q psy4821 55 LKGDAHISFKNLSAKYGSIFSTKLGD----QLIVVLSDYRHIREAFRKE-EFSGRPHTELSSI--LGGYEVN-------- 119 (520)
Q Consensus 55 l~~~~~~~~~~~~~kyG~i~~~~~g~----~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~--~~g~~~~-------- 119 (520)
+..+|+.++.+| ++||||+++++|+ +++++++||+++++++++. .|++++....... ..+.++.
T Consensus 10 ~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 88 (384)
T 3oo3_A 10 LRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDHT 88 (384)
T ss_dssp ETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred cccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhHH
Confidence 356899999999 5999999999887 8999999999999999766 7877765432111 1111111
Q ss_pred ----------------HHHHHHHHHH-----HH-hCCCCCChhHHHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHH
Q psy4821 120 ----------------VFLKSLQAQA-----EL-CGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEG 177 (520)
Q Consensus 120 ----------------~~~~~~~~~~-----~l-~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~ 177 (520)
.+...+++.+ .+ ..++.+|+...+...+.+.+...+||.+.+. ...+.+.++..
T Consensus 89 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~----~~~~~~~~~~~ 164 (384)
T 3oo3_A 89 RLRRTVAPAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDD----QAELSRMIRES 164 (384)
T ss_dssp HHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGG----HHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHH
Confidence 1112222222 22 3566788888887777777777788865432 11222221111
Q ss_pred hhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhh
Q psy4821 178 FKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFET 257 (520)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (520)
.
T Consensus 165 ~------------------------------------------------------------------------------- 165 (384)
T 3oo3_A 165 R------------------------------------------------------------------------------- 165 (384)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcH
Q psy4821 258 MAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHD 337 (520)
Q Consensus 258 ~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~ 337 (520)
. .. ..++..++...+.+++.+.++++++. ...|+++.+++. . + ..+ ++
T Consensus 166 ----~--------~~---~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~d~l~~ll~~--~-~------~~l----~~ 213 (384)
T 3oo3_A 166 ----E--------SR---LPRQRTLSGLGIVNYTKRLTSGKRRD----PGDGMIGVIVRE--H-G------AEI----SD 213 (384)
T ss_dssp ----H--------CS---CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHH--H-G------GGS----CH
T ss_pred ----c--------cC---ChHHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHh--c-C------CCC----CH
Confidence 0 00 24455667778888888888887763 246999999976 1 1 136 99
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeC
Q psy4821 338 RQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIP 416 (520)
Q Consensus 338 ~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP 416 (520)
+++.+++.++++||+|||+++++|++++|++||++|+++++|++.+ +||+|+||++|+++.+++|.+.+|++++||.||
T Consensus 214 ~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip 293 (384)
T 3oo3_A 214 EELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIH 293 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGGHHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCCcccCCcceeeCCCEEECCEEEC
Confidence 9999999999999999999999999999999999999999999988 999999999999987789999999999999999
Q ss_pred CCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecC
Q psy4821 417 KNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESP 495 (520)
Q Consensus 417 ~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~ 495 (520)
||+.|+++.+++|| +||++|+|||| +..++|||.|+|.|+|++||.+|++++++.||++| +|++.
T Consensus 294 ~Gt~V~~~~~~~~r-----~dp~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 359 (384)
T 3oo3_A 294 AGDVLTCSMLATNR-----APGDRFDITRE---------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLA 359 (384)
T ss_dssp TTCEEEECHHHHHC-----CTTCCCCTTCS---------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred CCCEEEEehhhcCC-----CCcceeCCCCC---------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeC
Confidence 99999999999999 89999999996 34689999999999999999999999999999999 99987
Q ss_pred CCC
Q psy4821 496 PGQ 498 (520)
Q Consensus 496 ~~~ 498 (520)
++.
T Consensus 360 ~~~ 362 (384)
T 3oo3_A 360 VPE 362 (384)
T ss_dssp SCG
T ss_pred CCC
Confidence 653
No 61
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=1.6e-47 Score=395.66 Aligned_cols=321 Identities=19% Similarity=0.244 Sum_probs=247.7
Q ss_pred chHHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhhc-cccCCCcc--h-hhhhhC--CchHH----
Q psy4821 57 GDAHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRKE-EFSGRPHT--E-LSSILG--GYEVN---- 119 (520)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~~-~~~~r~~~--~-~~~~~~--g~~~~---- 119 (520)
.+|+..+.+|+ +||||++++++ +.++++++||+++++++.++ .|++++.. . ....+. |.++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 122 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDD 122 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCCT
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCCc
Confidence 67999999996 79999999986 67899999999999999987 68877632 1 111110 11221
Q ss_pred --------------------HHHHHHHHHH-----HHh-C--CCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHH
Q psy4821 120 --------------------VFLKSLQAQA-----ELC-G--ATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRF 170 (520)
Q Consensus 120 --------------------~~~~~~~~~~-----~l~-~--~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~ 170 (520)
.+...+++.+ ++. . ++.+|+...+ ..++.++++.+ ||.+++. ...+
T Consensus 123 ~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~----~~~~ 197 (435)
T 2wm5_A 123 PRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD----HQRI 197 (435)
T ss_dssp THHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG----HHHH
T ss_pred HHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH----HHHH
Confidence 1111222222 121 1 2378988755 78999999998 9986542 1122
Q ss_pred HHHHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHH
Q psy4821 171 MHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKT 250 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (520)
.+..+....
T Consensus 198 ~~~~~~~~~----------------------------------------------------------------------- 206 (435)
T 2wm5_A 198 FHWTNVILG----------------------------------------------------------------------- 206 (435)
T ss_dssp HHHHHHHHH-----------------------------------------------------------------------
T ss_pred HHHHHHHhc-----------------------------------------------------------------------
Confidence 222221110
Q ss_pred HHHHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccccc
Q psy4821 251 LSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330 (520)
Q Consensus 251 ~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~ 330 (520)
...|.+ ++ ..++..++...+.+++.+.++++++. ...|+++.+++...+ +..
T Consensus 207 -----------~~~p~~--~~----~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~~-------~~~ 258 (435)
T 2wm5_A 207 -----------FGDPDL--AT----DFDEFMQVSADIGAYATALAEDRRVN----HHDDLTSSLVEAEVD-------GER 258 (435)
T ss_dssp -----------TTCTTS--CC----CHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCCBT-------TBC
T ss_pred -----------cCCcch--hh----hHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCHHHHHHhhhcc-------CCC
Confidence 011211 11 23456777788889999999888763 236899999864211 113
Q ss_pred ccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHH-hH-hHHHhhhccccCccccceeeccccc
Q psy4821 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELD-TV-ATILETLRRSSVVALGTIHAVTRDV 408 (520)
Q Consensus 331 l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~-~~-a~i~E~lRl~p~~~~~~~R~~~~d~ 408 (520)
+ +++++.+++..+++||+|||+++++|++++|++||++|+|||+|++ .+ +||+|+||++|+++ .++|.+.+|+
T Consensus 259 l----s~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~ 333 (435)
T 2wm5_A 259 L----SSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVV-YMRRTLTQDI 333 (435)
T ss_dssp C----CHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHHHHHHHCSBC-CEEEEESSCE
T ss_pred C----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHhHHHHHHHHHHhhcCccc-CcceEeCCCe
Confidence 6 9999999999999999999999999999999999999999999999 44 99999999999999 5899999999
Q ss_pred eecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCC-CCCCCcchHHHHHHHHHHHHHHH
Q psy4821 409 KFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGV-GRRMCLGDVLARMELFLFFSTLM 487 (520)
Q Consensus 409 ~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~-G~r~C~G~~~a~~e~~~~l~~ll 487 (520)
+++||.||||+.|+++.+++||||++|+||++|+|||| +..++|||+ |+|.|+|++||.+|++++++.||
T Consensus 334 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~---------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll 404 (435)
T 2wm5_A 334 ELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN---------PNPHLGFGGGGAHFCLGANLARREIRVAFDELR 404 (435)
T ss_dssp EETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC---------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred eECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999994 135899999 99999999999999999999999
Q ss_pred hhcc-eecCC
Q psy4821 488 HTFG-IESPP 496 (520)
Q Consensus 488 ~~f~-~~~~~ 496 (520)
++|+ +++.+
T Consensus 405 ~~f~~~~l~~ 414 (435)
T 2wm5_A 405 RQMPDVVATE 414 (435)
T ss_dssp HHCTTCEECS
T ss_pred HhCCccEECC
Confidence 9997 99875
No 62
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=3.9e-47 Score=388.90 Aligned_cols=314 Identities=16% Similarity=0.235 Sum_probs=241.6
Q ss_pred CCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhhccccCCCcchh-------h-h--hh--CC------
Q psy4821 55 LKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRKEEFSGRPHTEL-------S-S--IL--GG------ 115 (520)
Q Consensus 55 l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~-------~-~--~~--~g------ 115 (520)
+..+|+.++.+| ++||||+++++ |++++++++||+++++++.++.|++++.... . . .+ .|
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 102 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDERIGRTHPDPPSAAQYVRSPFLDLLISDADAESGR 102 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTTEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCCCCCCccccccCCcccccccccceeeCCCCCCCC
Confidence 456789999999 89999999997 8999999999999999998775655443210 0 1 11 22
Q ss_pred chHH----------------HHHHHHHHHH-----HH-hCCCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHH
Q psy4821 116 YEVN----------------VFLKSLQAQA-----EL-CGATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMH 172 (520)
Q Consensus 116 ~~~~----------------~~~~~~~~~~-----~l-~~~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~ 172 (520)
.... .+...+++.+ ++ ..++.+|+...+ ..++.++++. +||.+.+. ...+.+
T Consensus 103 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~ 177 (404)
T 2xbk_A 103 RQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQR----RAELTT 177 (404)
T ss_dssp HHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG----HHHHHH
T ss_pred chHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH----HHHHHH
Confidence 1111 1111122222 12 245578887655 4677888886 68875431 112221
Q ss_pred HHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHH
Q psy4821 173 LIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLS 252 (520)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (520)
.++...
T Consensus 178 ~~~~~~-------------------------------------------------------------------------- 183 (404)
T 2xbk_A 178 LLAGIA-------------------------------------------------------------------------- 183 (404)
T ss_dssp HHHHHT--------------------------------------------------------------------------
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 111100
Q ss_pred HHHhhhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhccccccccc
Q psy4821 253 KLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFN 332 (520)
Q Consensus 253 ~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~ 332 (520)
.. ... . +..++...+.+++.+.++++++.. ..|+++.+ + ++ .+
T Consensus 184 ---------~~-------~~~--p--~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~l-~-------~~----~l- 226 (404)
T 2xbk_A 184 ---------KL-------DDR--E--GAVRAQDDLFGYVAGLVEHKRAEP----GPDIISRL-N-------DG----EL- 226 (404)
T ss_dssp ---------BS-------SCH--H--HHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHH-H-------SS----SC-
T ss_pred ---------hc-------cCc--H--HHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHh-h-------cC----CC-
Confidence 00 000 1 445666778888888888877642 35888887 1 11 26
Q ss_pred CCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCcc-ccceeecccccee
Q psy4821 333 GKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVA-LGTIHAVTRDVKF 410 (520)
Q Consensus 333 ~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~-~~~~R~~~~d~~l 410 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ ..++|.+.+|+++
T Consensus 227 ---s~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l 303 (404)
T 2xbk_A 227 ---TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEF 303 (404)
T ss_dssp ---CHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCBCSCEEESSCEEE
T ss_pred ---CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCccccccceeECCCeeE
Confidence 999999999999999999999999999999999999999999999877 99999999999999 5589999999999
Q ss_pred cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy4821 411 NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490 (520)
Q Consensus 411 ~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f 490 (520)
+||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|+++|.+|++++++.||++|
T Consensus 304 ~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f 374 (404)
T 2xbk_A 304 GGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP---------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRL 374 (404)
T ss_dssp TTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS---------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC---------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999983 3589999999999999999999999999999999
Q ss_pred -ceecCCC
Q psy4821 491 -GIESPPG 497 (520)
Q Consensus 491 -~~~~~~~ 497 (520)
++++.++
T Consensus 375 ~~~~l~~~ 382 (404)
T 2xbk_A 375 PELRPELP 382 (404)
T ss_dssp TTCEESSC
T ss_pred CcceecCC
Confidence 7998754
No 63
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=8.7e-48 Score=393.51 Aligned_cols=194 Identities=21% Similarity=0.282 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHH
Q psy4821 278 KTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKN 357 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~ 357 (520)
++..++...+.+++.+.++++++. ...|+++.+++.. ++ .+ +++++.+++.++++||+|||++
T Consensus 181 ~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~--~~-------~l----~~~el~~~~~~l~~AG~dTt~~ 243 (398)
T 1lfk_A 181 KRRAALGDKFSRYLLAMIARERKE----PGEGMIGAVVAEY--GD-------DA----TDEELRGFCVQVMLAGDDNISG 243 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHHH--GG-------GS----CHHHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHhc--CC-------CC----CHHHHHHHHHHHHHHhccHHHH
Confidence 456677788888898988888764 2368999998764 11 36 9999999999999999999999
Q ss_pred HHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCC
Q psy4821 358 TLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWE 436 (520)
Q Consensus 358 tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~ 436 (520)
+++|++++|++||++|+||++|++.+ +||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus 244 ~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~ 323 (398)
T 1lfk_A 244 MIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAP 323 (398)
T ss_dssp HHHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCT
T ss_pred HHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcC
Confidence 99999999999999999999999877 99999999999999668999999999999999999999999999999999999
Q ss_pred CCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 437 SPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 437 ~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||++| ++++..+
T Consensus 324 dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 376 (398)
T 1lfk_A 324 DVDRLDVTREP---------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADP 376 (398)
T ss_dssp TTTSCCTTSCC---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred CccccCCCCCC---------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence 99999999983 3589999999999999999999999999999999 8998643
No 64
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=1.7e-47 Score=394.05 Aligned_cols=197 Identities=25% Similarity=0.347 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhH
Q psy4821 276 TRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtt 355 (520)
..++..++.+.+.+++.+.++++++. ...|+++.+++...+. ..+ +++++.+++..+++||+|||
T Consensus 197 ~~~~~~~~~~~l~~~~~~~i~~r~~~----~~~d~l~~ll~~~~~~-------~~l----s~~ei~~~~~~l~~AG~eTT 261 (418)
T 3r9b_A 197 LFDEQMKAGMWLRDYLRALIDERRRT----PGEDLMSGLVAVEESG-------DQL----TEDEIIATCNLLLIAGHETT 261 (418)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTS----CCSSHHHHHHHHHHHS-------SSC----CHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC----CCccHHHHHHHhhhcc-------CCC----CHHHHHHHHHHHHHHhHHHH
Confidence 46677888889999999999888764 2469999999763321 136 99999999999999999999
Q ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCC
Q psy4821 356 KNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPEL 434 (520)
Q Consensus 356 a~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~ 434 (520)
+++++|++++|++||++|+||++|++.+ +||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++
T Consensus 262 a~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~ 340 (418)
T 3r9b_A 262 VNLIANAALAMLRTPGQWAALAADGSRASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTI 340 (418)
T ss_dssp HHHHHHHHHHHHHSTTHHHHHHHCGGGHHHHHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcCHHHHHHHHhChHhHHHHHHHHHHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCccc
Confidence 9999999999999999999999999988 999999999999998 67999999999999999999999999999999999
Q ss_pred CCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 435 WESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 435 ~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
|+||++|+|||. +..++|||+|+|.|+|++||.+|++++++.||++| ++++.++
T Consensus 341 ~~dp~~F~p~R~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 395 (418)
T 3r9b_A 341 VGAPDRFDPDRA---------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE 395 (418)
T ss_dssp SSSTTSCCTTCS---------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred CCCcCcCCCCCC---------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC
Confidence 999999999992 34689999999999999999999999999999999 8998754
No 65
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1.6e-47 Score=393.40 Aligned_cols=319 Identities=18% Similarity=0.207 Sum_probs=242.2
Q ss_pred CchHHHHHHHHHhhcCCee-----EEEecCeeEEEecCHHHHHHHHhhc-cccCCCcch--hh--hh---hCCchHH---
Q psy4821 56 KGDAHISFKNLSAKYGSIF-----STKLGDQLIVVLSDYRHIREAFRKE-EFSGRPHTE--LS--SI---LGGYEVN--- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~-----~~~~g~~~~vvi~dp~~i~~i~~~~-~~~~r~~~~--~~--~~---~~g~~~~--- 119 (520)
..+|+.++.+|+ +||||+ ++++ .++++++||+++++++.++ .|++++... .. .. ..+.++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccCC
Confidence 457899999995 799999 7776 6789999999999999987 687776432 11 11 1233333
Q ss_pred ---------------------HHHHHHHHHH-----HHhCCCCCChh-HHHHHHHHHHHHHHHhcccCCCCChHHHHHHH
Q psy4821 120 ---------------------VFLKSLQAQA-----ELCGATGVDVN-PLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172 (520)
Q Consensus 120 ---------------------~~~~~~~~~~-----~l~~~~~~~l~-~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~ 172 (520)
.+...+++.+ ++.....+|+. .++..++.++++. +||.+++. ...+.+
T Consensus 101 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~----~~~~~~ 175 (414)
T 2uuq_A 101 PPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAH-YLGVPEED----WTQFDG 175 (414)
T ss_dssp TTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHH-HTTCCGGG----HHHHHH
T ss_pred chhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHH-HhCCCHHH----HHHHHH
Confidence 1112222222 22333468886 5567889999998 68876541 112222
Q ss_pred HHHHHhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHH
Q psy4821 173 LIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLS 252 (520)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (520)
..+.....
T Consensus 176 ~~~~~~~~------------------------------------------------------------------------ 183 (414)
T 2uuq_A 176 WTQAIVAA------------------------------------------------------------------------ 183 (414)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHhh------------------------------------------------------------------------
Confidence 11111000
Q ss_pred HHHhhhhhhccc-ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccc
Q psy4821 253 KLFETMAVVNFL-PFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLF 331 (520)
Q Consensus 253 ~~~~~~~~~~~~-P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l 331 (520)
..+ |.. ++..++...+.+++.+.++++++. ...|+++.+++...+ +.+..+
T Consensus 184 ---------~~~~p~~----------~~~~~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~~~~-----~~~~~l 235 (414)
T 2uuq_A 184 ---------NAVDGAT----------TGALDAVGSMMAYFTGLIERRRTE----PADDAISHLVAAGVG-----ADGDTA 235 (414)
T ss_dssp ---------HHC---------------CCHHHHHHHHHHHHHHHHHHTTS----CCSSHHHHHHHTTTT-----CTTCHH
T ss_pred ---------cccCCch----------hHHHHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHhcccc-----cCCCCC
Confidence 011 210 122345667778888888887764 236899999865320 011136
Q ss_pred cCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeecccccee
Q psy4821 332 NGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKF 410 (520)
Q Consensus 332 ~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l 410 (520)
+++++.+++.++++||+|||+++++|++++|++||++|+||++|++.+ +||+|+||++|+++ .++|.+.+|+++
T Consensus 236 ----s~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l 310 (414)
T 2uuq_A 236 ----GTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQ-GLARTTTRDVTI 310 (414)
T ss_dssp ----HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHHCSBC-CEEEEESSCEEE
T ss_pred ----CHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCcC-CcceEECCCEEE
Confidence 999999999999999999999999999999999999999999999877 99999999999999 589999999999
Q ss_pred cCeeeCCCCEEEecccccccCCCCC-CCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhh
Q psy4821 411 NGFTIPKNTQIVPLLHAVHMDPELW-ESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHT 489 (520)
Q Consensus 411 ~g~~iP~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~ 489 (520)
+||.||||+.|+++.+++||||++| +||++|+||||. ..++|||.|+|.|+|++||.+|++++++.||++
T Consensus 311 ~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~ 381 (414)
T 2uuq_A 311 GDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP---------RNILTFSHGAHHCLGAAAARMQCRVALTELLAR 381 (414)
T ss_dssp TTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC---------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC---------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 999999999985 258999999999999999999999999999999
Q ss_pred c-ceecCC
Q psy4821 490 F-GIESPP 496 (520)
Q Consensus 490 f-~~~~~~ 496 (520)
| ++++.+
T Consensus 382 f~~~~l~~ 389 (414)
T 2uuq_A 382 CPDFEVAE 389 (414)
T ss_dssp CCSEEECG
T ss_pred CcccEECC
Confidence 9 699873
No 66
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=4.1e-48 Score=407.44 Aligned_cols=161 Identities=15% Similarity=0.199 Sum_probs=140.7
Q ss_pred cHHHHHHHHHHHh-hhhhhhHHHHHHHHHHHHHh-ChhHHHHHHHHHHhH--------------------hHHHhhhccc
Q psy4821 336 HDRQMQQIIGDLF-STGMETIKNTLQWSLVYMMH-YPAVAKAVQDELDTV--------------------ATILETLRRS 393 (520)
Q Consensus 336 ~~~ei~~~~~~~l-~Ag~dtta~tl~~~l~~L~~-~P~v~~klr~Ei~~~--------------------a~i~E~lRl~ 393 (520)
+++|+.++++.++ +||+|||+.+++|++++|+. ||++|++||+|++++ +||+|+||++
T Consensus 279 ~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~ 358 (495)
T 3dsk_A 279 SREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFE 358 (495)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcC
Confidence 8999998666555 99999999999999999995 999999999999865 6999999999
Q ss_pred cCccccceeecccccee----cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCc-------cCCCccccc
Q psy4821 394 SVVALGTIHAVTRDVKF----NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV-------TKPEFFLPF 462 (520)
Q Consensus 394 p~~~~~~~R~~~~d~~l----~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-------~~~~~~~~F 462 (520)
|+++. ..|.+.+|+++ +||.||||+.|+++.+++||||++|+||++|+||||+++++.. .....++||
T Consensus 359 p~~~~-~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~f 437 (495)
T 3dsk_A 359 PPVTA-QYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETP 437 (495)
T ss_dssp CSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCC
T ss_pred CCccc-cceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCC
Confidence 99998 56779999999 4999999999999999999999999999999999999753221 112234555
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCC
Q psy4821 463 GVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPG 497 (520)
Q Consensus 463 G~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~ 497 (520)
|+|+|.|||++||.+|++++++.|+++|++...++
T Consensus 438 g~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 472 (495)
T 3dsk_A 438 TVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472 (495)
T ss_dssp CTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence 56669999999999999999999999999987653
No 67
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=5.1e-47 Score=389.44 Aligned_cols=317 Identities=18% Similarity=0.269 Sum_probs=242.9
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecC--eeEEEecCHHHHHHHHhhc-cccCCCcchhhhhh-----C-CchHH-------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGD--QLIVVLSDYRHIREAFRKE-EFSGRPHTELSSIL-----G-GYEVN------- 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~--~~~vvi~dp~~i~~i~~~~-~~~~r~~~~~~~~~-----~-g~~~~------- 119 (520)
..+|+..+.++++ ||||+++...| .+++++++++++++++++. .|++++........ . +.++.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHHH
Confidence 4589999999987 99999886344 7889999999999999776 68776543221110 0 22222
Q ss_pred -----------------HHHHHHHHHH-----HHhCCCCCChhHHH-HHHHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Q psy4821 120 -----------------VFLKSLQAQA-----ELCGATGVDVNPLL-ATSISNVICSIVMSVRFSNEDPQFKRFMHLIDE 176 (520)
Q Consensus 120 -----------------~~~~~~~~~~-----~l~~~~~~~l~~~~-~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~ 176 (520)
.+...+++.+ ++..+..+|+...+ ..++.++++. +||.... +...+.+..+.
T Consensus 115 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~----~~~~~~~~~~~ 189 (415)
T 3mgx_A 115 RKLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCE-ILGVPAE----DEDMLIDLTNH 189 (415)
T ss_dssp HHHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHH-HHTCCGG----GHHHHHHHHHH
T ss_pred HHHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HcCCCHH----HHHHHHHHHHH
Confidence 1112222222 12344568888777 5689999987 5785422 22233333222
Q ss_pred HhhhhhhchhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHh
Q psy4821 177 GFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFE 256 (520)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (520)
....
T Consensus 190 ~~~~---------------------------------------------------------------------------- 193 (415)
T 3mgx_A 190 AFGG---------------------------------------------------------------------------- 193 (415)
T ss_dssp HTSC----------------------------------------------------------------------------
T ss_pred HHcc----------------------------------------------------------------------------
Confidence 1110
Q ss_pred hhhhhcccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCc
Q psy4821 257 TMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNH 336 (520)
Q Consensus 257 ~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~ 336 (520)
..|. ..+.. . .++...+.+++.+.++++++. ...|+++.+++.. .+ +
T Consensus 194 ------~~~~--~~~~~--~----~~~~~~l~~~~~~~i~~rr~~----~~~dll~~ll~~~-----------~l----s 240 (415)
T 3mgx_A 194 ------EDEL--FDGMT--P----RQAHTEILVYFDELITARRKE----PGDDLVSTLVTDD-----------DL----T 240 (415)
T ss_dssp ------CC------CCC--H----HHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHCT-----------TS----C
T ss_pred ------cCcc--cchHH--H----HHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHhCC-----------CC----C
Confidence 0000 01111 1 256677888888888888765 2468999988542 26 9
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeee
Q psy4821 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTI 415 (520)
Q Consensus 337 ~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~i 415 (520)
++++.+++..+++||+|||+++++|++++|++||++|+||++|+.-+ +||+|+||++|+++. ++|.+.+|++++||.|
T Consensus 241 ~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~I 319 (415)
T 3mgx_A 241 IDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAMH-VLRVTTADVTINGRDL 319 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTSSCHHHHHHHHHHHHCCBCE-EEEEESSCEEETTEEE
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHHhcCcccc-cceecCCCeeECCEEE
Confidence 99999999999999999999999999999999999999999999766 999999999999995 8999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceec
Q psy4821 416 PKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIES 494 (520)
Q Consensus 416 P~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~ 494 (520)
|||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.||++| ++++
T Consensus 320 p~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l 390 (415)
T 3mgx_A 320 PSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP---------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDL 390 (415)
T ss_dssp CTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCCEEEechHHhCCChhhcCCccccCCCCCC---------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999973 3589999999999999999999999999999999 8998
Q ss_pred CCC
Q psy4821 495 PPG 497 (520)
Q Consensus 495 ~~~ 497 (520)
..+
T Consensus 391 ~~~ 393 (415)
T 3mgx_A 391 ERE 393 (415)
T ss_dssp CSC
T ss_pred CCC
Confidence 643
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.2e-45 Score=380.52 Aligned_cols=197 Identities=21% Similarity=0.285 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHH
Q psy4821 277 RKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta 356 (520)
.+...++..++.+++.+.+++++.. +...|+++.+++...+. .+ +++++.+++..+++||+|||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~dll~~ll~~~~~~--------~l----s~~el~~~~~~l~~AG~eTTa 271 (426)
T 3rwl_A 207 WDQRKTELLECAAYFQVLWNERVNK---DPGNDLISMLAHSPATR--------NM----TPEEYLGNVLLLIVGGNDTTR 271 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS---CCCSSHHHHHHHCGGGG--------GC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCHHHHHHhcccCC--------CC----CHHHHHHHHHHHHHHHHHHHH
Confidence 4455566788888898888887432 23479999998753211 26 999999999999999999999
Q ss_pred HHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCC
Q psy4821 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELW 435 (520)
Q Consensus 357 ~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~ 435 (520)
++++|++++|++||++|++|++|++.+ +||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|
T Consensus 272 ~~l~~~l~~L~~~P~~~~~lr~E~~~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f 350 (426)
T 3rwl_A 272 NSMTGGVLALHKNPDQFAKLKANPALVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVI 350 (426)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred HHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCcccc
Confidence 999999999999999999999999887 999999999999998 899999999999999999999999999999999999
Q ss_pred CCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 436 ESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 436 ~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
+||++|+||||.+ ..++|||+|+|.|+|++||.+|++++++.||++| ++++..+
T Consensus 351 ~dP~~F~p~R~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 405 (426)
T 3rwl_A 351 DRPEEFIIDRPRP--------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAE 405 (426)
T ss_dssp SSTTSCCTTCSCT--------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred CCcCccCCCCCCC--------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCC
Confidence 9999999999943 4689999999999999999999999999999999 9998754
No 69
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=3.7e-46 Score=390.13 Aligned_cols=163 Identities=14% Similarity=0.176 Sum_probs=140.9
Q ss_pred cHHHHHHHHHHHh-hhhhhhHHHHHHHHHHHHHh-ChhHHHHHHHHHHhH---------------------hHHHhhhcc
Q psy4821 336 HDRQMQQIIGDLF-STGMETIKNTLQWSLVYMMH-YPAVAKAVQDELDTV---------------------ATILETLRR 392 (520)
Q Consensus 336 ~~~ei~~~~~~~l-~Ag~dtta~tl~~~l~~L~~-~P~v~~klr~Ei~~~---------------------a~i~E~lRl 392 (520)
+++++.++++.++ ++|+|||+++++|++++|++ ||++|++||+|++++ +||+|+||+
T Consensus 261 ~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl 340 (473)
T 3dan_A 261 PKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRI 340 (473)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhc
Confidence 9999998886666 88889999999999999999 899999999998765 599999999
Q ss_pred ccCccccceeecccccee----cCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCc------cCCCccccc
Q psy4821 393 SSVVALGTIHAVTRDVKF----NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV------TKPEFFLPF 462 (520)
Q Consensus 393 ~p~~~~~~~R~~~~d~~l----~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~------~~~~~~~~F 462 (520)
+|+++. ..|.+.+|+++ +||.||||+.|+++.+++||||++|+||++|+||||++.+.+. .....+++|
T Consensus 341 ~p~~~~-~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~F 419 (473)
T 3dan_A 341 EPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESP 419 (473)
T ss_dssp SCSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCC
T ss_pred CCCccc-ccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCcccccccceecCCcCcCCC
Confidence 999998 45779999999 9999999999999999999999999999999999999862110 011234455
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcceecCCCCC
Q psy4821 463 GVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQP 499 (520)
Q Consensus 463 G~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~ 499 (520)
|+|+|.|||++||.+|++++++.||++|++...++++
T Consensus 420 g~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~ 456 (473)
T 3dan_A 420 TVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGE 456 (473)
T ss_dssp CTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccCCc
Confidence 5555999999999999999999999999987655443
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=1.6e-45 Score=375.99 Aligned_cols=323 Identities=17% Similarity=0.200 Sum_probs=244.4
Q ss_pred CchHHHHHHHHHhhcCCeeEEEecCeeEEEecCHHHHHHHHhhccccCCCcchhh-------h-hh--CCchHH------
Q psy4821 56 KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTELS-------S-IL--GGYEVN------ 119 (520)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvi~dp~~i~~i~~~~~~~~r~~~~~~-------~-~~--~g~~~~------ 119 (520)
..+|+..+.++++ +|||+++..| .+++++++++++++.++.|+.++..... . .+ .|....
T Consensus 19 ~~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~ 94 (394)
T 2wiy_A 19 RNNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLPIMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQT 94 (394)
T ss_dssp HHCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTSTTEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHH
T ss_pred ccCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCCCccccccccccccchhcccccccCCchHHHHHHHHH
Confidence 4578999998865 5899976644 5899999999999976655443211100 0 01 121111
Q ss_pred ----------HHHHHHHHHH-H----HhCCCCCChhHHHHHHHHHHHHHHHhcccCCCCChHHHHHHHHHHHHhhhhhhc
Q psy4821 120 ----------VFLKSLQAQA-E----LCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETM 184 (520)
Q Consensus 120 ----------~~~~~~~~~~-~----l~~~~~~~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (520)
.+...+++.+ + +..++.+|+...+..++.++++..+||.+.+. ...+.+.+.+.. ...
T Consensus 95 ~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~----~~~~~~~~~~~~---~~~ 167 (394)
T 2wiy_A 95 NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDD----ADAVMEAMFEAM---LMQ 167 (394)
T ss_dssp HTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCC----HHHHHHHHHHHH---GGG
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhH----HHHHHHHHHHHH---Hhc
Confidence 1112222222 1 24566799999999999999999999976432 222322221110 000
Q ss_pred hhhcccccccccccchhhhhhhhhhhhhhhccCCCCCchhhhhhhhhhccccccccccchhHHHHHHHHHHhhhhhhccc
Q psy4821 185 AVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFL 264 (520)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (520)
...
T Consensus 168 -----------------------------------------------------------------------------~~~ 170 (394)
T 2wiy_A 168 -----------------------------------------------------------------------------SAE 170 (394)
T ss_dssp -----------------------------------------------------------------------------SSS
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 111
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHH
Q psy4821 265 PFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQII 344 (520)
Q Consensus 265 P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~ 344 (520)
|.. . ..++..++...+.+++.+.+++++++. ..|+++.+++...+ + .+ +++++.+++
T Consensus 171 p~~-----~--~~~~~~~~~~~l~~~~~~~i~~rr~~~----~~dll~~Ll~~~~~----~----~l----s~~el~~~~ 227 (394)
T 2wiy_A 171 PAD-----G--DVDRAAVAFGYLSARVAEMLEDKRVNP----GDGLADSLLDAARA----G----EI----TESEAIATI 227 (394)
T ss_dssp CCT-----T--HHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHHT----T----SS----CHHHHHHHH
T ss_pred ccc-----h--HHHHHHHHHHHHHHHHHHHHHHhhcCC----CCcHHHHHHHhhhc----C----CC----CHHHHHHHH
Confidence 210 1 234445566778888888888877642 35899999876421 0 26 999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEe
Q psy4821 345 GDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVP 423 (520)
Q Consensus 345 ~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~ 423 (520)
..+++||+|||+++++|++++|++||++|++|++|++.+ +||+|+||++||++. ++|.+.+|++++||.||+|+.|++
T Consensus 228 ~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~ 306 (394)
T 2wiy_A 228 LVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLS-FLRFPTEDVEIGGVLIEAGSPIRF 306 (394)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCCEEE
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHhhCCCccC-eeEEECCCEEEcCeecCCCCEEEe
Confidence 999999999999999999999999999999999999877 999999999999985 889999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcc-eecCCC
Q psy4821 424 LLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFG-IESPPG 497 (520)
Q Consensus 424 ~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~ 497 (520)
+.+++||||++|+||++|+||||++. ..++|||+|+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus 307 ~~~~~~rdp~~~~dP~~F~p~R~~~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 307 MIGAANRDPEVFDDPDVFDHTRPPAA-------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 374 (394)
T ss_dssp EHHHHTTCTTTSSSTTSCCTTCCGGG-------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred ChHhhcCCcccCCCccccCCCCCCCC-------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence 99999999999999999999999742 35899999999999999999999999999999998 998753
No 71
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=2e-45 Score=371.68 Aligned_cols=184 Identities=21% Similarity=0.281 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy4821 282 KNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQW 361 (520)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~ 361 (520)
++...+.+++.+.++++++. ...|+++.+++. .+ +++++.+++.++++||+|||+++++|
T Consensus 162 ~~~~~~~~~~~~~i~~r~~~----~~~dll~~ll~~------------~l----s~~el~~~~~~l~~AG~eTt~~~l~~ 221 (367)
T 3b4x_A 162 RKYLELISFSKKELDSRKGK----EIVDLTGKIANS------------NL----SELEKEGYFILLMIAGNETTTNLIGN 221 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTTT----CCSSHHHHHHTS------------SS----CHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC----CCCCHHHHHHhc------------cC----CHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 45567778888888877764 246899998854 16 99999999999999999999999999
Q ss_pred HHHHHHhChhHHHHHHHHHHhHhHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCc
Q psy4821 362 SLVYMMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDF 441 (520)
Q Consensus 362 ~l~~L~~~P~v~~klr~Ei~~~a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F 441 (520)
++++|++ |++|+||++|++ -+||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|
T Consensus 222 ~l~~L~~-P~~~~~l~~e~~-~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F 298 (367)
T 3b4x_A 222 AIEDFTL-YNSWDYVREKGA-LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSF 298 (367)
T ss_dssp HHHHHHH-TTCHHHHHHHCS-HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred HHHHHhC-HHHHHHHHhCCc-hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCcccc
Confidence 9999999 999999999998 789999999999999 5899999999999999999999999999999999999999999
Q ss_pred cCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCC
Q psy4821 442 RPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPG 497 (520)
Q Consensus 442 ~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~ 497 (520)
+||||. ..++|||+|+|.|+|+++|.+|++++++.|+++| ++++.++
T Consensus 299 ~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 346 (367)
T 3b4x_A 299 IPDRTP---------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK 346 (367)
T ss_dssp CTTCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCC---------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc
Confidence 999984 3589999999999999999999999999999999 6998653
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.1e-45 Score=367.00 Aligned_cols=165 Identities=22% Similarity=0.276 Sum_probs=151.3
Q ss_pred chhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhHhHHH
Q psy4821 308 RDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL 387 (520)
Q Consensus 308 ~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~a~i~ 387 (520)
.| ++.+++... + +..+ +++++.+++.++++||+|||+++++|++++|++||++|+|+++|+ -+||+
T Consensus 158 ~d-l~~ll~~~~----~---~~~l----~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~--~a~i~ 223 (343)
T 2rfb_A 158 GI-INVLAGSSL----K---NRKL----TMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR--SGFVE 223 (343)
T ss_dssp SH-HHHHHTCBC----S---SSBC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH--HHHHH
T ss_pred cc-HHHHHhhhc----C---CCCC----CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc--HHHHH
Confidence 47 888875321 0 1136 999999999999999999999999999999999999999999998 68999
Q ss_pred hhhccccCc-cccceeeccccceecCeeeCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCC
Q psy4821 388 ETLRRSSVV-ALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGR 466 (520)
Q Consensus 388 E~lRl~p~~-~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~ 466 (520)
|+||++|++ + .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||| ..++|||.|+
T Consensus 224 E~lRl~p~~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~----------~~~~~FG~G~ 292 (343)
T 2rfb_A 224 ETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR----------EMHLAFGIGI 292 (343)
T ss_dssp HHHHHSCSBCC-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------SCCCTTCCST
T ss_pred HHHhhCccccc-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC----------CCCccCCCCC
Confidence 999999999 8 589999999999999999999999999999999999999999999995 2579999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcc-eecCCC
Q psy4821 467 RMCLGDVLARMELFLFFSTLMHTFG-IESPPG 497 (520)
Q Consensus 467 r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~ 497 (520)
|.|+|+++|.+|++++++.|+++|+ +++.++
T Consensus 293 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 293 HMCLGAPLARLEASIALNDILNHFKRIKIDYK 324 (343)
T ss_dssp TSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred ccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 9999999999999999999999997 998763
No 73
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=2.6e-44 Score=369.70 Aligned_cols=198 Identities=19% Similarity=0.323 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhH
Q psy4821 276 TRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtt 355 (520)
..++..++...+.+++.+.++++++. ...|+++.+++...++ .+ +++++.+++..+++||+|||
T Consensus 195 ~~~~~~~~~~~l~~~~~~~i~~rr~~----~~~dll~~ll~~~~~~--------~l----s~~el~~~~~~l~~AG~eTT 258 (416)
T 3p3o_A 195 ILVKVEQGLGRMFDYLVAAIEKRKVE----PGDDLTSDIVRAFHDG--------VL----DDYELRTLVATVLVAGYETT 258 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHTT--------SS----CHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC----CCccHHHHHHHhhccC--------CC----CHHHHHHHHHHHHHhhccHH
Confidence 45667788889999999999988875 3468999999764421 26 99999999999999999999
Q ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCC
Q psy4821 356 KNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPEL 434 (520)
Q Consensus 356 a~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~ 434 (520)
+++++|++++|++||++|+||++|++.+ +||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++
T Consensus 259 a~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~ 338 (416)
T 3p3o_A 259 NHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV 338 (416)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhc
Confidence 9999999999999999999999999877 999999999999977789999999999999999999999999999999999
Q ss_pred CCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcc-eecCCC
Q psy4821 435 WESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFG-IESPPG 497 (520)
Q Consensus 435 ~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~ 497 (520)
|+||++|+||||.+ ..++|||.|+|.|+|++||.+|++++++.|+++|+ +++..+
T Consensus 339 ~~dp~~F~p~R~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 394 (416)
T 3p3o_A 339 FADADRFDITVKRE--------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE 394 (416)
T ss_dssp CTTTTSCCTTCCCS--------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred cCCccccCCCCCCC--------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 99999999999742 35899999999999999999999999999999995 887644
No 74
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=1.3e-44 Score=365.94 Aligned_cols=182 Identities=25% Similarity=0.355 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhHHH
Q psy4821 278 KTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKN 357 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtta~ 357 (520)
++..++...+.+++.+.+ +...|+++.+++. .+ +++++.+++.++++||+|||++
T Consensus 162 ~~~~~~~~~~~~~~~~~i---------~~~~d~l~~ll~~------------~l----~~~ei~~~~~~l~~AG~dTt~~ 216 (368)
T 1io7_A 162 FELGKKYLELIGYVKDHL---------NSGTEVVSRVVNS------------NL----SDIEKLGYIILLLIAGNETTTN 216 (368)
T ss_dssp HHHHHHHHHHHHHHHHHT---------TSSCHHHHHHHTS------------SC----CHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---------CCCCCHHHHHHhc------------cC----CHHHHHHHHHHHHHhhhHHHHH
Confidence 344556666777776665 1236899988853 16 9999999999999999999999
Q ss_pred HHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCCC
Q psy4821 358 TLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWE 436 (520)
Q Consensus 358 tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~~ 436 (520)
+++|++++|++|| +|+|+++| +.+ +||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus 217 ~l~~~l~~L~~~P-~~~~l~~E-~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~ 293 (368)
T 1io7_A 217 LISNSVIDFTRFN-LWQRIREE-NLYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293 (368)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHH-TCHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTST
T ss_pred HHHHHHHHHHhCh-HHHHHHhc-chHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCC
Confidence 9999999999999 99999999 544 99999999999999 58999999999999999999999999999999999999
Q ss_pred CCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcc-eecCC
Q psy4821 437 SPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFG-IESPP 496 (520)
Q Consensus 437 ~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~ 496 (520)
||++|+|||+ +..++|||+|+|.|+|+++|.+|++++++.|+++|+ +++.+
T Consensus 294 dP~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 345 (368)
T 1io7_A 294 DGEKFIPDRN---------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345 (368)
T ss_dssp TTTSCCTTCC---------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CcceeCCCCC---------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC
Confidence 9999999993 135899999999999999999999999999999997 99864
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=8.6e-43 Score=357.77 Aligned_cols=152 Identities=24% Similarity=0.418 Sum_probs=145.7
Q ss_pred cHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCee
Q psy4821 336 HDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFT 414 (520)
Q Consensus 336 ~~~ei~~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~ 414 (520)
+++|+.+++.++++||+|||+++++|++++|++||++|+||++|...+ ++++|++|++|+++. ++|.+.+|++++||.
T Consensus 237 ~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~ 315 (412)
T 4dnj_A 237 TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLARNAFEEAVRFESPVQT-FFRTTTRDVELAGAT 315 (412)
T ss_dssp CTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEE
T ss_pred hHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCccccccccceeeeecCCccc-ccccCCCCeEECCcc
Confidence 999999999999999999999999999999999999999999998877 899999999999987 899999999999999
Q ss_pred eCCCCEEEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-cee
Q psy4821 415 IPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIE 493 (520)
Q Consensus 415 iP~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~ 493 (520)
||||+.|+++.+++||||++|+||++|+||||. ..|+|||+|+|.|+|++||.+|++++++.||++| +++
T Consensus 316 Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~---------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~ 386 (412)
T 4dnj_A 316 IGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT---------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIE 386 (412)
T ss_dssp ECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred CCCCCeEEeehhhccCChhhCCCccccCCCCCC---------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCe
Confidence 999999999999999999999999999999974 3579999999999999999999999999999999 899
Q ss_pred cCCC
Q psy4821 494 SPPG 497 (520)
Q Consensus 494 ~~~~ 497 (520)
+..+
T Consensus 387 l~~~ 390 (412)
T 4dnj_A 387 IAGP 390 (412)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8653
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=3.2e-40 Score=338.40 Aligned_cols=199 Identities=17% Similarity=0.217 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHhhhhhhhH
Q psy4821 276 TRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~l~~~~~~~ei~~~~~~~l~Ag~dtt 355 (520)
.......+...+..++.++++++++. ...|+++.++.... .+..+ +++++.+++..+++||+|||
T Consensus 196 ~~~~~~~~~~~~~~~~~~li~~rr~~----~~ddl~s~L~~~~~-------~~~~~----~~~e~~~~~~~ll~AG~eTT 260 (417)
T 4dxy_A 196 MATDLEAGNNGFYAYVDPIIRARVGG----DGDDLITLMVNSEI-------NGERI----AHDKAQGLISLLLLGGLDTV 260 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC----CCCSHHHHHHTCEE-------TTEEC----CHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC----Cccchhhhhccccc-------cCCcc----chhHHHHHHHHHHhhcccch
Confidence 34556667788888888888887764 23688888775422 12246 99999999999999999999
Q ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHhHhHHHhhhccccCccccceeeccccceecCeeeCCCCEEEecccccccCCCCC
Q psy4821 356 KNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELW 435 (520)
Q Consensus 356 a~tl~~~l~~L~~~P~v~~klr~Ei~~~a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~v~~~~~~~~~d~~~~ 435 (520)
+++++|++++|++||++++++++|...+....|.+|++++++. ..|.+.+|++++|+.||+|+.|+++++++||||++|
T Consensus 261 a~~l~~~~~~L~~~P~~~~~l~~e~~~~~~avee~~~~~~~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f 339 (417)
T 4dxy_A 261 VNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFPVVS-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAAN 339 (417)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHCHHHHHHTHHHHHHHSCCBE-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTS
T ss_pred hhHHHHHHHHHHhCchhhhhhccCccccccceeeeeccccccc-cccccccceEecCccccCCCEEEEeehhhcCChhhC
Confidence 9999999999999999999999999999777777777777665 789999999999999999999999999999999999
Q ss_pred CCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCCCC
Q psy4821 436 ESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQP 499 (520)
Q Consensus 436 ~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~ 499 (520)
+||++|+|||+ +..|+|||+|+|.|+|++||.+|++++++.||++| ++++++++.
T Consensus 340 ~dP~~FdpeR~---------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~ 395 (417)
T 4dxy_A 340 PEPWKLDFSRR---------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET 395 (417)
T ss_dssp SSTTSCCTTCS---------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC
T ss_pred CCccccCCCCC---------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC
Confidence 99999999993 34689999999999999999999999999999999 999976643
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.7e-39 Score=325.21 Aligned_cols=147 Identities=18% Similarity=0.208 Sum_probs=129.5
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHhChhHHHHHHHHHHhH-hHHHhhhccccCccccceeeccccceecCeeeCCCCE
Q psy4821 342 QIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQ 420 (520)
Q Consensus 342 ~~~~~~l~Ag~dtta~tl~~~l~~L~~~P~v~~klr~Ei~~~-a~i~E~lRl~p~~~~~~~R~~~~d~~l~g~~iP~G~~ 420 (520)
+++..+++||+|||+++++|++++|++||+++++|++|++.+ +||+|+||++|+++. ++|.+.+|++++|+.||||+.
T Consensus 214 ~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~ 292 (381)
T 2yjn_B 214 DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEE 292 (381)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCE
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHHHHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCE
Confidence 677889999999999999999999999999999999999877 999999999999997 789999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccCCccCCCCCCccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-ceecCCCC
Q psy4821 421 IVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQ 498 (520)
Q Consensus 421 v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~ 498 (520)
|+++.+++||||++|+||++|+|+||.+ ..++|||+| |.|+|+++|.+|++++++.|+++| ++++..+.
T Consensus 293 V~~~~~~~~rDp~~~~dp~~F~p~R~~~--------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~ 362 (381)
T 2yjn_B 293 VVVVVAAANRDPEVFAEPDRLDVDRPDA--------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV 362 (381)
T ss_dssp EEEEHHHHTTCTTTSSSTTSCCSSCSCC--------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC
T ss_pred EEeCHHHHcCCcccCCCccccCCCCCCC--------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence 9999999999999999999999999974 368999999 999999999999999999999999 99987643
No 78
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=56.97 E-value=34 Score=24.39 Aligned_cols=51 Identities=14% Similarity=0.258 Sum_probs=38.1
Q ss_pred cccccccCCch----HHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGD----AHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~----~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-..+ ....++++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 57777654322 457788999999999888875 3456778899998888764
No 79
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=50.25 E-value=51 Score=25.32 Aligned_cols=58 Identities=26% Similarity=0.376 Sum_probs=41.5
Q ss_pred CCCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEec------CeeEEEecCHHHHHHHHhh
Q psy4821 39 LPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 39 ~ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g------~~~~vvi~dp~~i~~i~~~ 98 (520)
.||.|..--++||++.-.. ...+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~~~t--~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYKIT--AEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCTTCC--HHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 4555656667898876422 45578888999999888872 2456778888888887764
No 80
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=44.43 E-value=99 Score=23.35 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=38.1
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec--CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. -.+.++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~V~nLp~~~--t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPPSG--SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCSSC--CHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3588887542 256678888999999888763 5667888899998888874
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=44.32 E-value=55 Score=23.95 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=37.9
Q ss_pred CCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEec----CeeEEEecCHHHHHHHH
Q psy4821 40 PPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG----DQLIVVLSDYRHIREAF 96 (520)
Q Consensus 40 ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g----~~~~vvi~dp~~i~~i~ 96 (520)
++-|+..-++|+++.-.. ...++++.++||+|..+++. |--+|-..+++.++.+.
T Consensus 7 ~~~~~~~l~V~~Lp~~~t--e~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~~ 65 (89)
T 3d2w_A 7 HHHHGSKVFVGRCTEDMT--AEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLC 65 (89)
T ss_dssp ----CCEEEEESCCTTCC--HHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHHT
T ss_pred CCCCCCEEEEeCCCCCCC--HHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHHc
Confidence 344444556898876432 46688888999999988875 45578889999988653
No 82
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=42.61 E-value=76 Score=23.89 Aligned_cols=54 Identities=13% Similarity=0.242 Sum_probs=40.3
Q ss_pred ccccccccccCCch----HHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 45 GLPIIGYLPFLKGD----AHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 45 ~~p~lG~~~~l~~~----~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
.--++||++.-..+ ....++++..+||+|..+++. |.-+|-..+++.++..+..
T Consensus 16 ~~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 16 SVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp SEEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred CEEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 34568998864322 567789999999999988875 3456777888888888775
No 83
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.18 E-value=41 Score=25.53 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred cccccccC-Cc-hHHHHHHHHHhhcC-CeeEEEecCeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFL-KG-DAHISFKNLSAKYG-SIFSTKLGDQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l-~~-~~~~~~~~~~~kyG-~i~~~~~g~~~~vvi~dp~~i~~i~~~ 98 (520)
.++|++.- .. .....++++..+|| .|..+ .||.-+|...+.+.++..+..
T Consensus 13 YV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 13 YVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 48998775 22 23455889999995 98877 578889999999999888765
No 84
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.51 E-value=1e+02 Score=23.23 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=37.1
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec--------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++|+++.-.. ...+.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 14 lfV~~Lp~~~t--e~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 14 VYIKGFPTDAT--LDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEEECCCTTCC--HHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEECCCCCCC--HHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 35788776422 45677888999999888764 3456788899999988874
No 85
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.96 E-value=1.2e+02 Score=21.98 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=39.3
Q ss_pred CCCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEec------C---eeEEEecCHHHHHHHHhh
Q psy4821 40 PPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG------D---QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 40 ppgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g------~---~~~vvi~dp~~i~~i~~~ 98 (520)
.|.|..--++||++.-.. ...++++.++||+|..+.+. . .-+|-..+++.++..+..
T Consensus 11 ~~~~~~~l~v~nlp~~~t--~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 11 NPDPNCCLGVFGLSLYTT--ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp SCCGGGCEEEESCCSSCC--HHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCC--HHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 344444556888876422 45678888999999887762 1 246777899998888774
No 86
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=34.61 E-value=1e+02 Score=22.90 Aligned_cols=53 Identities=11% Similarity=0.195 Sum_probs=38.3
Q ss_pred cccccccccCC----chHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLK----GDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~----~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
.=++||++... .-....++++..+||+|..+++. |.-+|-..+++.++..+..
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 44678887642 22346688889999999988863 3346888899998888764
No 87
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=34.45 E-value=89 Score=19.84 Aligned_cols=10 Identities=10% Similarity=-0.101 Sum_probs=3.9
Q ss_pred HHHHHHHHHh
Q psy4821 24 LVLYKIMLYI 33 (520)
Q Consensus 24 ~~~~~~~~~~ 33 (520)
+..+.+++.+
T Consensus 28 ~~~~~~~RRR 37 (44)
T 2l2t_A 28 LTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHhhhh
Confidence 3333334433
No 88
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=32.90 E-value=85 Score=24.16 Aligned_cols=49 Identities=16% Similarity=0.165 Sum_probs=36.6
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec--CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-.. .+.++++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 20 ~V~nLp~~~t--~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 20 VVSGLPPSGS--WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEECCSSCC--TTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCCC--HHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 5788875422 44567788999999888874 4567888899998888774
No 89
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.24 E-value=1.4e+02 Score=21.75 Aligned_cols=52 Identities=12% Similarity=0.169 Sum_probs=37.1
Q ss_pred ccccccccC-C-chHHHHHHHHHhhcCCeeEEEec------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFL-K-GDAHISFKNLSAKYGSIFSTKLG------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l-~-~~~~~~~~~~~~kyG~i~~~~~g------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.- . .+....+.++..+||+|..+++. +.-+|-..+++.++..+..
T Consensus 12 l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 12 VQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 468888764 2 23344455899999999988874 3356777899988888764
No 90
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=31.77 E-value=1.8e+02 Score=22.80 Aligned_cols=54 Identities=17% Similarity=0.173 Sum_probs=38.3
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
|..--++||++.-.. ...++++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 45 ~~~~l~V~nLp~~~t--e~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSLYTT--ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTTSCC--HHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 333446788776422 45678888999999888873 2346778899999888874
No 91
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=30.63 E-value=1.2e+02 Score=23.32 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=36.7
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
=++||++.-.. .+.++++..+||+|..+++. |.-+|-..+++.++..+..
T Consensus 8 lfV~nLp~~~t--e~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKSID--NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTTCC--HHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCCCC--HHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 36888876422 46788888999999877753 1246888899999888764
No 92
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.87 E-value=1.3e+02 Score=22.80 Aligned_cols=49 Identities=22% Similarity=0.237 Sum_probs=36.2
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec---CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-. ....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 14 ~V~nLp~~~--te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 14 LAKNLPAGT--LAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp EEESCCTTC--CHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 577776532 356688888999999888863 3456778889988888764
No 93
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=28.55 E-value=1.3e+02 Score=21.78 Aligned_cols=53 Identities=19% Similarity=0.294 Sum_probs=37.8
Q ss_pred cccccccccC-C-chHHHHHHHHHhhcCCeeEEEec------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFL-K-GDAHISFKNLSAKYGSIFSTKLG------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l-~-~~~~~~~~~~~~kyG~i~~~~~g------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.- . .+....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3468888764 2 23334555899999999888764 4567888899988888764
No 94
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.18 E-value=1.2e+02 Score=21.47 Aligned_cols=54 Identities=20% Similarity=0.002 Sum_probs=37.3
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEecC---------eeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD---------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~---------~~~vvi~dp~~i~~i~~~ 98 (520)
|..--++||++.-.. ...++++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 4 ~~~~l~v~nlp~~~t--~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (85)
T 1x4e_A 4 GSSGLYIRGLQPGTT--DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 66 (85)
T ss_dssp CCCEEEEESCCTTCC--HHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 333445788775422 455778889999998877532 346778899988888764
No 95
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.68 E-value=1.8e+02 Score=21.36 Aligned_cols=54 Identities=13% Similarity=0.161 Sum_probs=38.4
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
+..--++||++.-.. ...++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 14 ~~~~l~V~nlp~~~t--~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 14 TPKRLHVSNIPFRFR--DPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CCCEEEEESCCTTCC--HHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 333446788875422 45578888999999888763 3456778899998888764
No 96
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=27.62 E-value=1.4e+02 Score=21.72 Aligned_cols=50 Identities=18% Similarity=0.323 Sum_probs=37.3
Q ss_pred cccccccc-CCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPF-LKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~-l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++. -.. ...+.++..+||+|..+.+ -+.-+|-..+++.++..+..
T Consensus 13 l~V~nlp~~~~t--~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 13 LFIGNLPLKNVS--KEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEESSTTSCCC--HHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCcccCC--HHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 35788875 322 4567888899999988886 34457888899999888874
No 97
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=27.44 E-value=1.8e+02 Score=22.94 Aligned_cols=53 Identities=9% Similarity=0.123 Sum_probs=37.3
Q ss_pred cccccccccC-Cc-hHHHHHHHHHhhcCCeeEEEec------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFL-KG-DAHISFKNLSAKYGSIFSTKLG------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l-~~-~~~~~~~~~~~kyG~i~~~~~g------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.- .. +.-..+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 3458888754 22 2334567889999999888773 3457888888888888765
No 98
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=27.38 E-value=1.4e+02 Score=22.17 Aligned_cols=50 Identities=22% Similarity=0.220 Sum_probs=35.7
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec-----C----eeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-----D----QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-----~----~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-.. .+.++++.++||+|..+++. + .-+|-..+++.++..+..
T Consensus 22 lfV~nLp~~~t--e~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQNMT--QDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTTCC--HHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCC--HHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 36888876422 45678888999999887763 1 135777899998888764
No 99
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=27.32 E-value=1.6e+02 Score=21.71 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=37.3
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec-CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-. ....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 ~l~V~nl~~~~--t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANTV--TEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTTC--CHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 34678877542 245678888999999888864 3456778899998888774
No 100
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=26.84 E-value=1.1e+02 Score=20.90 Aligned_cols=50 Identities=12% Similarity=0.222 Sum_probs=34.5
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhhc
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRKE 99 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~~ 99 (520)
++||++.-. ....++++..+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 3 ~v~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 3 FVGGLSPDT--PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp EESCCCSSC--CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 356665432 245577888899999887763 23467778898888887753
No 101
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=26.25 E-value=1.1e+02 Score=18.13 Aligned_cols=28 Identities=11% Similarity=0.031 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4821 6 LVMGALTNVRCLILFISVLVLYKIMLYI 33 (520)
Q Consensus 6 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 33 (520)
|.|+--.+.-++++++.+.-.+.+|+-+
T Consensus 6 l~malt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 6 LTMALTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCceeEEEccc
Confidence 4444333444444455555444545433
No 102
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.25 E-value=1.8e+02 Score=21.23 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=36.9
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. ...++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~~t--~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 10 RLFVRNLSYTSS--EEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEECCCTTCC--HHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 345788775422 45678888999999888873 2356788899999888854
No 103
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.01 E-value=1.5e+02 Score=21.56 Aligned_cols=50 Identities=20% Similarity=0.232 Sum_probs=36.0
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec------------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG------------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g------------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 l~V~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNFST--TEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCTTC--CHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3578877542 245678888999999877763 2346777899999888874
No 104
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.83 E-value=1.8e+02 Score=21.38 Aligned_cols=51 Identities=18% Similarity=0.113 Sum_probs=36.9
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEecC-------eeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD-------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~-------~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-. -...+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 17 ~l~V~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cqi_A 17 TLYVGNLSRDV--TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAA 74 (103)
T ss_dssp EEEEESCCTTC--CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCccC--CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHHH
Confidence 44678877542 2456788889999998887632 446778899998888763
No 105
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=25.27 E-value=2.1e+02 Score=21.46 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=36.4
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-. ....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 28 ~l~V~nLp~~~--te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 87 (108)
T 2jrs_A 28 RLYVGSLHFNI--TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 87 (108)
T ss_dssp EEEEECCCSSC--CHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 33578887542 245578888999999877763 2346778899999888764
No 106
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=25.25 E-value=1.9e+02 Score=20.66 Aligned_cols=51 Identities=16% Similarity=0.142 Sum_probs=36.1
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
-=++||++.-. ....++++..+||+|..+.+- +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~~--t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPFDF--TWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCTTC--CHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 33578877542 256678888999999877763 2346777889988888764
No 107
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=25.18 E-value=2e+02 Score=22.13 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=37.2
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
.-++||++.-. ....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 24 ~l~V~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 83 (126)
T 3ex7_B 24 ILFVTGVHEEA--TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 83 (126)
T ss_dssp EEEEESCCTTC--CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34578877542 245677888999999888862 3447888899999888864
No 108
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.07 E-value=1.9e+02 Score=20.74 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=36.7
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEecC---------eeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD---------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~---------~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-. ....++++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 7 ~l~v~nlp~~~--t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (95)
T 2dnz_A 7 GLYVGSLHFNI--TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 66 (95)
T ss_dssp EEEEESCCTTC--CHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34578877542 2455788889999998877632 346778899999888874
No 109
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.96 E-value=2.1e+02 Score=21.05 Aligned_cols=56 Identities=20% Similarity=0.088 Sum_probs=38.9
Q ss_pred CCCcccccccccccCCchHHHHHHHHHhh-cCCeeEEEec--------CeeEEEecCHHHHHHHHhh
Q psy4821 41 PGPWGLPIIGYLPFLKGDAHISFKNLSAK-YGSIFSTKLG--------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 41 pgP~~~p~lG~~~~l~~~~~~~~~~~~~k-yG~i~~~~~g--------~~~~vvi~dp~~i~~i~~~ 98 (520)
+.|..--++||++.-.. ...+.++..+ ||+|..+.+. +.-+|-..+++.++..+..
T Consensus 6 ~~~~~~l~V~nLp~~~t--~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPDVD--DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTTCC--HHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCCCC--HHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 34444556888876422 4557778888 9999887762 2346777899999888874
No 110
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=24.85 E-value=1.5e+02 Score=21.74 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=35.1
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec----CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG----DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g----~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-. ....++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 4 ~V~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 4 YVGNLGTGA--GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp EEECCCSSC--SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 467766532 245678888999999877763 3456778899998888774
No 111
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.75 E-value=2.2e+02 Score=21.22 Aligned_cols=54 Identities=7% Similarity=0.071 Sum_probs=38.1
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
|..--++||++.-.. ...++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 14 ~~~~l~V~nLp~~~t--~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 14 EGKTVFIRNLSFDSE--EEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCCEEEESCCTTCC--HHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCC--HHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 334456888876422 45577888999999888864 2346777899998888764
No 112
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.37 E-value=2e+02 Score=21.19 Aligned_cols=56 Identities=14% Similarity=-0.007 Sum_probs=39.4
Q ss_pred CCCcccccccccccCCchHHHHHHHHHhhcCCeeEEEec-------CeeEEEecCHHHHHHHHhh
Q psy4821 41 PGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 41 pgP~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvi~dp~~i~~i~~~ 98 (520)
+-+..--++||++.-.. ...++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~~~~~~l~V~nlp~~~t--~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 12 RYQVVNLYVKNLDDGID--DERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp CSSCCCEEEECCCTTCC--HHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCCC--HHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 33444556888876422 45678888999999887764 2346778899999888774
No 113
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.36 E-value=2.4e+02 Score=21.50 Aligned_cols=51 Identities=12% Similarity=0.108 Sum_probs=37.3
Q ss_pred ccccccccccCCchHHHHHHHHHhhcCCeeEEEec---CeeEEEecCHHHHHHHHh
Q psy4821 45 GLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---DQLIVVLSDYRHIREAFR 97 (520)
Q Consensus 45 ~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---~~~~vvi~dp~~i~~i~~ 97 (520)
.--++||++.-. -...++++..+||.|..+++. |.-+|-..+++.+...+.
T Consensus 17 ~~LfV~nLp~~v--te~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 17 RVIHIRKLPIDV--TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CEEEECSCCTTS--CHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCCC--CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 344688887642 245578889999999888864 345778888888887776
No 114
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.20 E-value=2.2e+02 Score=21.26 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=36.7
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec---CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. -...++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 28 l~V~nl~~~~--t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 28 VYCGGIASGL--TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEECCSSCC--CHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3578877542 245677888999999888873 4457888899988888754
No 115
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=24.08 E-value=1.8e+02 Score=22.06 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=36.7
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec-----C----eeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG-----D----QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g-----~----~~~vvi~dp~~i~~i~~~ 98 (520)
--++||+..-. -...++++..+||+|..+.+. + .-+|...+++.++..+..
T Consensus 8 ~lfV~nL~~~~--te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLNDNV--RETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCTTC--CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCC--CHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34678877542 256678888999999888762 1 236888899998888764
No 116
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.95 E-value=2e+02 Score=20.58 Aligned_cols=52 Identities=15% Similarity=0.274 Sum_probs=37.7
Q ss_pred ccccccccccCCchHHHHHHHHHhhcCCeeEEEecC---------eeEEEecCHHHHHHHHhh
Q psy4821 45 GLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD---------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 45 ~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~---------~~~vvi~dp~~i~~i~~~ 98 (520)
.--++||++.-.. ...++++.++||+|..+.+.. .-+|-..+++.++..+..
T Consensus 17 ~~l~V~nlp~~~t--~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 17 STVYVSNLPFSLT--NNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp TSEEEESCCTTSC--HHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCCCC--HHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3446888875422 455888889999998888732 346788899998888764
No 117
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=23.90 E-value=2.1e+02 Score=20.86 Aligned_cols=54 Identities=15% Similarity=-0.029 Sum_probs=35.9
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeE--------EEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFS--------TKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~--------~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
|..--++||++.-.. ...++++.++||.|.. +.+. |.-+|-..+++.++..+..
T Consensus 12 ~~~~l~V~nLp~~~t--~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 12 DNNTIFVQGLGENVT--IESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp CCSEEEEECCCSSCC--HHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCC--HHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 333446888876422 4567888899999876 5542 1336777888888888763
No 118
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=23.39 E-value=1.8e+02 Score=20.17 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=34.1
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-.. ...+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 5 ~V~nlp~~~t--~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNVNVD--DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCTTCC--HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCCC--HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 4666655322 45677888999999877753 2246788899998888764
No 119
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.96 E-value=2.2e+02 Score=20.65 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=36.0
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec---CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||+ .. -...++++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 17 ~l~V~n~-~~---t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE-DM---TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS-SC---CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC-CC---CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3457873 32 246678888999999988875 3456777899998888864
No 120
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.86 E-value=2.2e+02 Score=20.69 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=37.1
Q ss_pred ccccccccccCCchHHHHHHHHHhhcCCeeEEEec--------CeeEEEecCHHHHHHHHhh
Q psy4821 45 GLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 45 ~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--------~~~~vvi~dp~~i~~i~~~ 98 (520)
.--++||++.-.. ...++++..+||+|..+++. +.-+|-..+++.++..+..
T Consensus 18 ~~l~v~nlp~~~t--~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 18 HKLFISGLPFSCT--KEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp SCEEEESCCTTCC--HHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCCCC--HHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 3445788775422 45578888999999887763 2346778899999888754
No 121
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=22.59 E-value=1.7e+02 Score=19.85 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=33.6
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-. ....++++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 3 ~v~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 3 FVGGLSVNT--TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp EEECCCSSC--CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred EEecCCCCC--CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 356665532 245577888999999877763 2346777889998888753
No 122
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=22.59 E-value=1.8e+02 Score=22.30 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=37.8
Q ss_pred cccccccccCCchHHHHHHHHHhhcC-CeeEEEec-----CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYG-SIFSTKLG-----DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG-~i~~~~~g-----~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. .+.++++.++|| .|..+.+. |.-+|-..+++.++..+..
T Consensus 30 ~l~VgnLp~~~t--e~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPEGCS--WQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSCCCC--HHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCCC--HHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 345888876432 567888899999 78777763 4457888899998888764
No 123
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=22.44 E-value=83 Score=17.01 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=19.4
Q ss_pred CcchHHHHHHHHHHHHHHHhhc
Q psy4821 469 CLGDVLARMELFLFFSTLMHTF 490 (520)
Q Consensus 469 C~G~~~a~~e~~~~l~~ll~~f 490 (520)
||..+-+..|-..++..||++=
T Consensus 1 cpss~~sL~EkHkILHrLLQ~~ 22 (26)
T 3bej_E 1 CPSSHSSLTERHKILHRLLQEG 22 (26)
T ss_pred CCCchhhHHHHHHHHHHHHHcC
Confidence 8888889999999999999863
No 124
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=22.32 E-value=2.3e+02 Score=20.98 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=36.0
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec--------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. ...+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 31 ~l~V~nlp~~~t--~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFGVS--DADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTTCC--HHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 445788765422 45577888899999877753 2346777899998888774
No 125
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=21.92 E-value=2.5e+02 Score=20.88 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=36.8
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 29 l~V~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHEEA--QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCTTC--CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3578877642 245578888999999888873 3457778899998888764
No 126
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.58 E-value=2.5e+02 Score=20.66 Aligned_cols=51 Identities=14% Similarity=0.024 Sum_probs=37.5
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEecC---------eeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD---------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~---------~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. ...+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 17 ~l~V~nlp~~~t--~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 17 TVYVGGLDEKVS--EPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEEECCCTTCC--HHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 335788776422 456888889999998888632 346778899999888875
No 127
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.44 E-value=2.3e+02 Score=20.19 Aligned_cols=52 Identities=21% Similarity=0.312 Sum_probs=37.6
Q ss_pred ccccccccccCCchHHHHHHHHHhhcCCeeEEEe-cCeeEEEecCHHHHHHHHhh
Q psy4821 45 GLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKL-GDQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 45 ~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvi~dp~~i~~i~~~ 98 (520)
.--++||++.-.. ...++++..+||+|..+.+ -+.-+|-..+++.++..+..
T Consensus 9 ~~l~V~nlp~~~t--~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 9 VKLFIGNLPREAT--EQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEEEESCCSSCC--HHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred eEEEEeCCCCCCC--HHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 3445788776422 4557888899999988876 34457778899998888754
No 128
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.41 E-value=2e+02 Score=21.19 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=36.6
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. ...+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~l~V~nLp~~~t--~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 15 TLKVDNLTYRTS--PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp EEEEESCCTTCC--HHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 335788876422 45678888999999888863 2346777888888888764
No 129
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.28 E-value=2.7e+02 Score=21.68 Aligned_cols=53 Identities=13% Similarity=0.120 Sum_probs=38.1
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEec---CeeEEEecCHHHHHHHHh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---DQLIVVLSDYRHIREAFR 97 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---~~~~vvi~dp~~i~~i~~ 97 (520)
|...-++||++.-.. ...++++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 30 ps~~LfVgNLp~~vt--e~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 30 PSRVIHIRKLPIDVT--EGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp CCSEEEEESCCTTCC--HHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCC--HHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 334456898876422 45678889999999888764 445777788888887775
No 130
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=21.23 E-value=2.2e+02 Score=20.37 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=36.5
Q ss_pred cccccccccCCchHHHHHHHHHhhcCCeeEEEecC--------eeEEEecCHHHHHHHHhh
Q psy4821 46 LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD--------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 46 ~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~--------~~~vvi~dp~~i~~i~~~ 98 (520)
--++||++.-.. ...++++..+||+|..+++.. .-+|-..+++.++..+..
T Consensus 18 ~l~v~nlp~~~~--~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 18 TVFVGNLEARVR--EEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp EEEEECCCTTCC--HHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred EEEEECCCCCCC--HHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 345788776422 456888889999998887632 346777888888888763
No 131
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.07 E-value=2.3e+02 Score=20.15 Aligned_cols=54 Identities=9% Similarity=0.092 Sum_probs=38.5
Q ss_pred CcccccccccccCCchHHHHHHHHHhhcCCeeEEEecC-eeEEEecCHHHHHHHHhh
Q psy4821 43 PWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD-QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 43 P~~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~-~~~vvi~dp~~i~~i~~~ 98 (520)
+..--++||++.-. ....++++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 8 ~~~~l~V~nlp~~~--t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 8 NTWKIFVGNVSAAC--TSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CSCCEEEESCCTTC--CHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCC--CHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 33344688887642 2456778889999998888643 456778899988888764
No 132
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.79 E-value=2.7e+02 Score=20.84 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=31.9
Q ss_pred HHHHHHHHhhcCCeeEEEec----CeeEEEecCHHHHHHHHhhc
Q psy4821 60 HISFKNLSAKYGSIFSTKLG----DQLIVVLSDYRHIREAFRKE 99 (520)
Q Consensus 60 ~~~~~~~~~kyG~i~~~~~g----~~~~vvi~dp~~i~~i~~~~ 99 (520)
...++++..+||+|..+++. |.-+|-..+++.+...+...
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~ 74 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNE 74 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhc
Confidence 56788999999999888874 23467788999988888764
No 133
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=20.72 E-value=2.2e+02 Score=19.89 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=35.5
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEecC---------eeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD---------QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~---------~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....++++.++||+|..+.+.. .-+|-..+++.++..+..
T Consensus 9 l~v~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPEI--TTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTTC--CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3578876542 2455788889999998777622 346777889998888764
No 134
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.72 E-value=2.4e+02 Score=20.17 Aligned_cols=52 Identities=13% Similarity=0.158 Sum_probs=37.5
Q ss_pred ccccccccccCCchHHHHHHHHHhhcCCeeEEEecC-eeEEEecCHHHHHHHHhh
Q psy4821 45 GLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGD-QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 45 ~~p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g~-~~~vvi~dp~~i~~i~~~ 98 (520)
.--++||++.-. ....++++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 11 ~~l~V~nLp~~~--t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 11 TKLHVGNISPTC--TNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEEEESCCSSC--CHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 344578887542 2466788889999998888643 456777888988888764
No 135
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.46 E-value=2.6e+02 Score=21.05 Aligned_cols=55 Identities=9% Similarity=0.055 Sum_probs=40.0
Q ss_pred CCccccccccccc-CCchHHHHHHHHHhhcCCeeEEEecC---eeEEEecCHHHHHHHHhh
Q psy4821 42 GPWGLPIIGYLPF-LKGDAHISFKNLSAKYGSIFSTKLGD---QLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 42 gP~~~p~lG~~~~-l~~~~~~~~~~~~~kyG~i~~~~~g~---~~~vvi~dp~~i~~i~~~ 98 (520)
.|..--++||++. -. -...++++..+||.|..+++.. .-+|-..+++.+...+..
T Consensus 13 ~p~~~l~V~nLp~~~~--te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 13 ETRRVVHIMDFQRGKN--LRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCCEEEEESCCCSSS--HHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCcC--CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3444556898886 32 3456888999999999888743 357888899888888763
No 136
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=20.30 E-value=2.6e+02 Score=20.53 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=36.0
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec---------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG---------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 26 l~V~nlp~~~--t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEEA--TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTTC--CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3578877642 245578888999999888763 2346777899988888764
No 137
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=20.24 E-value=1.9e+02 Score=22.15 Aligned_cols=50 Identities=18% Similarity=0.121 Sum_probs=36.5
Q ss_pred ccccccccCCchHHHHHHHHHhhcCCeeEEEec--------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG--------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g--------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 l~V~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 10 LFIGGLNRET--NEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEECCTTTC--CHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3578876542 245678888999999877763 3456778899999888864
No 138
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=20.17 E-value=2.3e+02 Score=19.83 Aligned_cols=49 Identities=16% Similarity=0.169 Sum_probs=34.8
Q ss_pred cccccccCCchHHHHHHHHHhhcCCeeEEEec----------CeeEEEecCHHHHHHHHhh
Q psy4821 48 IIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG----------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 48 ~lG~~~~l~~~~~~~~~~~~~kyG~i~~~~~g----------~~~~vvi~dp~~i~~i~~~ 98 (520)
++||++.-. ....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 ~V~nlp~~~--t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 8 HIGRLTRNV--TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp EEECCCTTC--CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC--CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 577776542 245677888999999877751 2346788899999888774
No 139
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.02 E-value=2.6e+02 Score=20.66 Aligned_cols=50 Identities=22% Similarity=0.143 Sum_probs=36.4
Q ss_pred ccccccccCCchHHHHHHHHHhhcCC-eeEEEec----------CeeEEEecCHHHHHHHHhh
Q psy4821 47 PIIGYLPFLKGDAHISFKNLSAKYGS-IFSTKLG----------DQLIVVLSDYRHIREAFRK 98 (520)
Q Consensus 47 p~lG~~~~l~~~~~~~~~~~~~kyG~-i~~~~~g----------~~~~vvi~dp~~i~~i~~~ 98 (520)
-++||++.-. ....++++..+||+ |..+.+. +.-+|-..+++.+...+..
T Consensus 11 l~V~nLp~~~--t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPKMK--KREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCTTS--CHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCCcC--CHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 3578877532 24667888899998 9888764 2346777899998888764
Done!