RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4821
(520 letters)
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 403 bits (1038), Expect = e-136
Identities = 122/550 (22%), Positives = 200/550 (36%), Gaps = 143/550 (26%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIR 93
+ PPGP+ P+IG + AH+SF L+ +YG +F +LG IVVL+ R I
Sbjct: 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 64
Query: 94 EAF--RKEEFSGRPHT-ELSSILGGYEVNVF-----------------LKSLQAQA---- 129
+A + F+ RP + GG + F +++ +
Sbjct: 65 QALVQQGSAFADRPSFASFRVVSGGRSM-AFGHYSEHWKVQRRAAHSMMRNFFTRQPRSR 123
Query: 130 ------------ELCGA--------TGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKR 169
EL +D PL +++NV+ ++ R
Sbjct: 124 QVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFG----------CR 173
Query: 170 FMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKKCSQPNEGFKLFETM 229
+ H D F + + E +
Sbjct: 174 YSH-DDP-----------EFRELLSHN-----------------------EEFGRTVGAG 198
Query: 230 AVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGA 289
++V+ +P+++Y P R + +
Sbjct: 199 SLVDVMPWLQYFPNPV----------------------------RTVFREFEQLNRNFSN 230
Query: 290 YFQEKINEHRTTFDASNI-RDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLF 348
+ +K H + RDM+D+++ EK + + + I D+F
Sbjct: 231 FILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGG--GARLDLENVPATITDIF 288
Query: 349 STGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILET 389
+T+ LQW L+ YP V VQ ELD V A + E
Sbjct: 289 GASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEA 348
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
+R SS V + HA T + G+ IPK+T + +V+ DP W +PE+F P RFL
Sbjct: 349 MRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDK 408
Query: 450 EGKVTK--PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNA 507
+G + K + F VG+R C+G+ L++M+LFLF S L H + P +P + +
Sbjct: 409 DGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKMNFSY 467
Query: 508 GVTITPDSHK 517
G+TI P S K
Sbjct: 468 GLTIKPKSFK 477
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 337 bits (867), Expect = e-111
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 26/293 (8%)
Query: 249 KTLSKLFETMA---VVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDAS 305
+ + ++ +V+ +P++K P T + L + + + ++ F +
Sbjct: 182 NYNEGIIDNLSKDSLVDLVPWLKIFPNK--TLEKLKSHVKIRNDLLNKILENYKEKFRSD 239
Query: 306 NIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVY 365
+I +MLD+ + + N + D + IGD+F G+ET + ++W+L +
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAF 299
Query: 366 MMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVALGTIHAVTR 406
++H P V K + +E+D ATI E LR V + H
Sbjct: 300 LLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV 359
Query: 407 DVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV--TKPEFFLPFGV 464
D F + K T+++ L A+H + + W P+ F P RFL P G + +LPFG
Sbjct: 360 DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGA 419
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHK 517
G R C+G++LAR ELFL + L+ F +E P LPSL+G V DS K
Sbjct: 420 GPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFK 472
Score = 159 bits (404), Expect = 3e-43
Identities = 44/222 (19%), Positives = 83/222 (37%), Gaps = 42/222 (18%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFL--KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRH 91
K P LP++G LPFL G H +F L KYG I+S ++G + V++ ++
Sbjct: 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQL 63
Query: 92 IREAF--RKEEFSGRPHTELSSILGGYEVNVFL-------------------------KS 124
+E + ++FSGRP I + +
Sbjct: 64 AKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQK 123
Query: 125 LQAQ-----AELCGA------TGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHL 173
L+ + LC +D++ + +++NVI I + + N DP+ +
Sbjct: 124 LEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNY 183
Query: 174 IDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
+ ++V+ +P++K P T + L +
Sbjct: 184 NEGIIDNLSKDSLVDLVPWLKIFPNK--TLEKLKSHVKIRND 223
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 322 bits (828), Expect = e-105
Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 34/301 (11%)
Query: 242 PGLRETRKTLSKLFETMA-----VVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
P + + + V+N +P + ++P L + + + E +
Sbjct: 178 PRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALA---GKVLRFQKAFLTQLDELLT 234
Query: 297 EHRTTFDASN-IRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETI 355
EHR T+D + RD+ +++L E+EKAK S F +D ++ ++ DLFS GM T
Sbjct: 235 EHRMTWDPAQPPRDLTEAFLAEMEKAKGNPES--SF----NDENLRIVVADLFSAGMVTT 288
Query: 356 KNTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVV 396
TL W L+ M+ +P V + VQ E+D V A I E R +V
Sbjct: 289 STTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIV 348
Query: 397 ALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKP 456
LG H +RD++ GF IPK T ++ L +V D +WE P F P FL +G KP
Sbjct: 349 PLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKP 408
Query: 457 EFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSH 516
E FLPF GRR CLG+ LARMELFLFF++L+ F P GQP PS G ++P +
Sbjct: 409 EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPY 468
Query: 517 K 517
+
Sbjct: 469 E 469
Score = 151 bits (383), Expect = 2e-40
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 48/230 (20%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLK-GDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
LPPGP LP +G L + + F L ++G +FS +L +VVL+ +
Sbjct: 6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAV 65
Query: 93 REAF--RKEEFSGRPHTELSSIL--GGYEVNVFL-------------------------K 123
REA E+ + RP ++ IL G VFL K
Sbjct: 66 REALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKK 125
Query: 124 SLQAQ-----AELCGA------TGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172
SL+ A LC A N LL ++SNVI S+ RF +DP+F R +
Sbjct: 126 SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLD 185
Query: 173 LIDEGFKLFETMA--VVNFLPFVKYLPG-----LRETRKTLSKVSETLKK 215
L EG K V+N +P + ++P LR + L+++ E L +
Sbjct: 186 LAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTE 235
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 319 bits (820), Expect = e-104
Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 34/294 (11%)
Query: 249 KTLSKLFETMA---VVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDAS 305
K + ET + ++F P ++YLP + + Q+ + EH FD +
Sbjct: 197 KNTHEFVETASSGNPLDFFPILRYLPNP--ALQRFKAFNQRFLWFLQKTVQEHYQDFDKN 254
Query: 306 NIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVY 365
++RD+ + +K + + L ++ ++ D+F G +T+ + WSL+Y
Sbjct: 255 SVRDITGALFKHSKKGPRASGN--LI----PQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308
Query: 366 MMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVALGTIHAVTR 406
++ P + + +Q ELDTV A ILET R SS + H+ TR
Sbjct: 309 LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTR 368
Query: 407 DVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK---PEFFLPFG 463
D NGF IPK + V+ DPELWE P +FRP RFLT +G E + FG
Sbjct: 369 DTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFG 428
Query: 464 VGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHK 517
+G+R C+G+VLA+ E+FLF + L+ PPG L G+T+ +
Sbjct: 429 MGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK-VDLTPIYGLTMKHARCE 481
Score = 161 bits (409), Expect = 7e-44
Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 49/239 (20%)
Query: 24 LVLYKIMLYIKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLI 83
VL + + K PP PWG P++G++ L + H++ +S +YG + ++G +
Sbjct: 2 AVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPV 61
Query: 84 VVLSDYRHIREAF--RKEEFSGRPHTELSSIL-GGYEVNVF-----------------LK 123
+VLS IR+A + ++F GRP S+++ G + L
Sbjct: 62 LVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALN 121
Query: 124 SL------------------QAQAE-LCGA--------TGVDVNPLLATSISNVICSIVM 156
+ +A+ L D + S++NVI ++
Sbjct: 122 TFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCF 181
Query: 157 SVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
F + + E + + ++F P ++YLP + ++
Sbjct: 182 GQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNP--ALQRFKAFNQRFLW 238
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 316 bits (811), Expect = e-102
Identities = 87/300 (29%), Positives = 138/300 (46%), Gaps = 30/300 (10%)
Query: 237 FVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
F + E + + + + N P++ LP + L +N + + I
Sbjct: 181 FQHMIELFSENVELAASAS--VFLYNAFPWIGILPFG--KHQQLFRNAAVVYDFLSRLIE 236
Query: 297 EHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356
+ + +D+YL E+++ K + S F + +G+L G ET
Sbjct: 237 KASVNRKPQLPQHFVDAYLDEMDQGKNDPSS--TF----SKENLIFSVGELIIAGTETTT 290
Query: 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVA 397
N L+W++++M YP + VQ E+D + A + E LR ++V
Sbjct: 291 NVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVP 350
Query: 398 LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457
LG HA + D G++IPK T ++ L++VH D + W PE F P RFL G K E
Sbjct: 351 LGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE 410
Query: 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHK 517
+PF +GRR CLG+ LARME+FLFF+ L+ F + P P LK G+T+ P +
Sbjct: 411 ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV-PDLKPRLGMTLQPQPYL 469
Score = 143 bits (363), Expect = 1e-37
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 42/206 (20%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLKGDA---HISFKNLSAKYGSIFSTKLGDQLIVVLSDYR 90
++ PPGP GLP IG + L + H+ + S YG IFS LG VVL+ Y
Sbjct: 8 RRPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYD 67
Query: 91 HIREAF--RKEEFSGRPHTELSSILGGYEVNVFL------------------------KS 124
++E + E F+ RP L + + KS
Sbjct: 68 VVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKS 127
Query: 125 LQAQ-----AELCGA------TGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHL 173
+++ A D L+ ++SN+ I+ RF+ ED F+ + L
Sbjct: 128 FESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIEL 187
Query: 174 IDEGFKLFETMA--VVNFLPFVKYLP 197
E +L + + + N P++ LP
Sbjct: 188 FSENVELAASASVFLYNAFPWIGILP 213
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 313 bits (804), Expect = e-101
Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 37/295 (12%)
Query: 249 KTLSKLFETMA--VVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASN 306
+ L K ++ + +++ +PF+++ P L + ++++ H+ + A
Sbjct: 194 QDLMKTWDHWSIQILDMVPFLRFFPNP--GLWRLKQAIENRDHMVEKQLRRHKESMVAGQ 251
Query: 307 IRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYM 366
RDM D L + + ++E QL + + + DLF G ET +TL W++ ++
Sbjct: 252 WRDMTDYMLQGVGRQRVEEGPGQL-----LEGHVHMSVVDLFIGGTETTASTLSWAVAFL 306
Query: 367 MHYPAVAKAVQDELDTV----------------------ATILETLRRSSVVALGTIHAV 404
+H+P + + +Q+ELD ATI E LR VV L H
Sbjct: 307 LHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRT 366
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGV 464
TR G+ IP+ ++P L H+D +WE P +FRP RFL P L FG
Sbjct: 367 TRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----PSALAFGC 422
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNA--GVTITPDSHK 517
G R+CLG+ LAR+ELF+ + L+ F + PP LPSL+ + GV + +
Sbjct: 423 GARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQ 477
Score = 146 bits (371), Expect = 1e-38
Identities = 40/239 (16%), Positives = 86/239 (35%), Gaps = 43/239 (17%)
Query: 17 LILFISVLVLYKIMLYIKKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFST 76
L + +L L + L + G+L L+ + I +L+ K G ++
Sbjct: 3 LAGLLLLLTLLAGAHLLWGRWKLRNLHLPPLVPGFLHLLQPNLPIHLLSLTQKLGPVYRL 62
Query: 77 KLGDQLIVVLSDYRHIREAF--RKEEFSGRPHTELSSILGGYEVNVFL------------ 122
+LG Q +VVL+ R I EA + +F+GRP ++ ++ L
Sbjct: 63 RLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKK 122
Query: 123 -----------KSLQAQ-----AELCGA------TGVDVNPLLATSISNVICSIVMSVRF 160
S++ E C V + + ++IC + +
Sbjct: 123 LTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKE 182
Query: 161 SNEDPQFKRFMHLIDEGFKLFETMA--VVNFLPFVKYLPG--LRETRKTLSKVSETLKK 215
D F + + K ++ + +++ +PF+++ P L ++ + ++K
Sbjct: 183 ---DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEK 238
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 310 bits (796), Expect = e-100
Identities = 92/301 (30%), Positives = 145/301 (48%), Gaps = 30/301 (9%)
Query: 237 FVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
F+ + L E K LS + NF P + Y PG L KN M +Y EK+
Sbjct: 177 FLNLMEKLNENIKILSSPW-IQICNNFSPIIDYFPGTH---NKLLKNVAFMKSYILEKVK 232
Query: 297 EHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356
EH+ + D +N +D +D +L ++EK K S F ++ DLF G ET
Sbjct: 233 EHQESMDMNNPQDFIDCFLMKMEKEKHNQPS--EF----TIESLENTAVDLFGAGTETTS 286
Query: 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVA 397
TL+++L+ ++ +P V VQ+E++ V A + E R ++
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP 346
Query: 398 LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457
HAVT D+KF + IPK T I+ L +V D + + +PE F P FL G K +
Sbjct: 347 TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSK 406
Query: 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPG-QPLPSLKGNAGVTITPDSH 516
+F+PF G+R+C+G+ LA MELFLF ++++ F ++S + L + G P +
Sbjct: 407 YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFY 466
Query: 517 K 517
+
Sbjct: 467 Q 467
Score = 145 bits (368), Expect = 3e-38
Identities = 58/210 (27%), Positives = 82/210 (39%), Gaps = 48/210 (22%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLKG-DAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
LPPGP LP+IG + + D S NLS YG +F+ G + IVVL Y +
Sbjct: 7 SGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAV 66
Query: 93 REAF--RKEEFSGRPHTELSSIL-GGY--------------------------------- 116
+EA EEFSGR L+ G+
Sbjct: 67 KEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIED 126
Query: 117 ----EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172
E ++ L+ A+ D +L + NVICSI+ RF +D QF M
Sbjct: 127 RVQEEARCLVEELRKT----KASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLME 182
Query: 173 LIDEGFKLFETMAVV---NFLPFVKYLPGL 199
++E K+ + + NF P + Y PG
Sbjct: 183 KLNENIKILSSPWIQICNNFSPIIDYFPGT 212
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 306 bits (786), Expect = 5e-99
Identities = 90/301 (29%), Positives = 135/301 (44%), Gaps = 30/301 (9%)
Query: 237 FVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
F++ + E LS NF F+ YLPG + + KN E+ Y E++
Sbjct: 175 FLRLMYLFNENFHLLST-PWLQLYNNFPSFLHYLPGSH---RKVIKNVAEVKEYVSERVK 230
Query: 297 EHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356
EH + D + RD+ D L E+EK K L+ + + DLF G ET
Sbjct: 231 EHHQSLDPNCPRDLTDCLLVEMEKEKHSAER--LY----TMDGITVTVADLFFAGTETTS 284
Query: 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVA 397
TL++ L+ +M YP + + + +E+D V A + E R ++V
Sbjct: 285 TTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVP 344
Query: 398 LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457
H TRD F G+ IPK T +VP L +V D + + PE F+P FL GK +
Sbjct: 345 SNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSD 404
Query: 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKG-NAGVTITPDSH 516
+F PF G+R+C G+ LARMELFL ++ F ++ L + G P +
Sbjct: 405 YFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRY 464
Query: 517 K 517
K
Sbjct: 465 K 465
Score = 149 bits (379), Expect = 6e-40
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 44/222 (19%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLK-GDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
LPPGP+ LPIIG L L+ + SF L+ ++G +F+ +G Q +VV+ Y+ +
Sbjct: 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAV 65
Query: 93 REAF--RKEEFSGRPHTELSSILGGYEVNVF----------------L-------KSLQA 127
+EA K+EFSGR + +F L + ++
Sbjct: 66 KEALLDYKDEFSGRGDLPAFHAHRDRGI-IFNNGPTWKDIRRFSLTTLRNYGMGKQGNES 124
Query: 128 Q-----AELCGA------TGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDE 176
+ L A D L+ + NVI I+ F D +F R M+L +E
Sbjct: 125 RIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNE 184
Query: 177 GFKLFET---MAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
F L T NF F+ YLPG + + K +K+
Sbjct: 185 NFHLLSTPWLQLYNNFPSFLHYLPGS---HRKVIKNVAEVKE 223
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 305 bits (784), Expect = 8e-99
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 237 FVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
F+ L + + S F +K+LPG + + + + + +K+
Sbjct: 176 FLSLLRMMLGIFQFTST-STGQLYEMFSSVMKHLPGPQ---QQAFQLLQGLEDFIAKKVE 231
Query: 297 EHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356
++ T D ++ RD +DS+L +++ + + F + + + +LF G ET+
Sbjct: 232 HNQRTLDPNSPRDFIDSFLIRMQEEEKNPNT--EF----YLKNLVMTTLNLFIGGTETVS 285
Query: 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVA 397
TL++ + +M +P V V +E+D V A I E R V+
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
Query: 398 LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457
+ V +D KF F +PK T++ P+L +V DP + +P+DF P FL +G+ K +
Sbjct: 346 MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD 405
Query: 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLK-GNAGVTITPDSH 516
F+PF +G+R C G+ LARMELFLFF+T+M F ++S + + G P ++
Sbjct: 406 AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNY 465
Query: 517 K 517
Sbjct: 466 T 466
Score = 142 bits (361), Expect = 2e-37
Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 51/226 (22%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
LPPGP LP IG L + S +S +YG +F+ LG + +VVL + +
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 93 REAF--RKEEFSGRPHT-ELSSILGGY--------------------------------- 116
REA + EEFSGR + GY
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 117 ----EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172
E + +L+ G +D L+ ++SNVI SIV RF +D +F +
Sbjct: 126 RIQEEAGFLIDALRGT----GGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLR 181
Query: 173 LIDEGFKLFETMAVV---NFLPFVKYLPGLRETRKTLSKVSETLKK 215
++ F+ T F +K+LPG ++ ++ + L+
Sbjct: 182 MMLGIFQFTSTSTGQLYEMFSSVMKHLPGP---QQQAFQLLQGLED 224
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 303 bits (779), Expect = 5e-98
Identities = 97/301 (32%), Positives = 152/301 (50%), Gaps = 30/301 (9%)
Query: 237 FVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKIN 296
F++ L ++ +S F + F F+K+ PG + + +N E+ + + +
Sbjct: 176 FLRLLDLFFQSFSLISS-FSSQVFELFSGFLKHFPGTH---RQIYRNLQEINTFIGQSVE 231
Query: 297 EHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIK 356
+HR T D SN RD +D YL +EK K + S+ F H + + + LF G ET
Sbjct: 232 KHRATLDPSNPRDFIDVYLLRMEKDKSDPSSE--F----HHQNLILTVLSLFFAGTETTS 285
Query: 357 NTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVA 397
TL++ + M+ YP V + VQ E++ V A I E R ++
Sbjct: 286 TTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 398 LGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPE 457
G H VT+D +F G+ IPKNT++ P+L + DP +E+P F P FL G + + E
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 458 FFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLK-GNAGVTITPDSH 516
F+PF +G+R+CLG+ +AR ELFLFF+T++ F I SP L +GV P S+
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSY 465
Query: 517 K 517
+
Sbjct: 466 Q 466
Score = 143 bits (363), Expect = 1e-37
Identities = 58/210 (27%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFL-KGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
LPPGP LP++G L + + SF L KYG +F+ LG + +VVL I
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 93 REAF--RKEEFSGRPHTEL-SSILGGY--------------------------------- 116
REA + E FSGR + I GY
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 117 ----EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMH 172
E ++ L+ +D L + SN+ICSIV RF +DP F R +
Sbjct: 126 RIQEEARCLVEELRKS----KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLD 181
Query: 173 LIDEGFKLFETMAVV---NFLPFVKYLPGL 199
L + F L + + F F+K+ PG
Sbjct: 182 LFFQSFSLISSFSSQVFELFSGFLKHFPGT 211
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 187 bits (476), Expect = 2e-53
Identities = 70/520 (13%), Positives = 148/520 (28%), Gaps = 121/520 (23%)
Query: 34 KKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHI 92
++ PP G +P +G + + K+G +F+ KL + + +++
Sbjct: 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSY 68
Query: 93 REAFRKEE--FSGRPHTELSSILGGYEVNVFLKSLQAQAELCGATGVDVNPLLATSISNV 150
+ + + H S+ G+ +
Sbjct: 69 HKVLCHGKYFDWKKFHFATSAKAFGHRSIDPM---------------------------- 100
Query: 151 ICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVS 210
+ + + + A+ + + ++ +
Sbjct: 101 ------------DGNTTENINDTFIKTLQ---GHALNSLTESMM-----ENLQRIMRPPV 140
Query: 211 ETLKKCSQPNEGFKLFETMAVVNFLP-----FVKYLPGLRETRKTLSKLFETMAVVN--F 263
+ K + ++ V F F + L + + + + F
Sbjct: 141 SSNSK-TAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVF 199
Query: 264 LPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKM 323
V LP +T R ++ + + + R + +++ +F +
Sbjct: 200 PALVAGLPIHM--FRTAHNAREKLAESLRHENLQKRESIS-----ELISLRMFLNDTLST 252
Query: 324 ENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV 383
+ D + + + WSL M+ P KA +E+
Sbjct: 253 FD-----------DLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRT 301
Query: 384 -----------------------------ATILETLRRSSVVALGTIHAVTRDVKFN--- 411
+ I E+LR SS I D +
Sbjct: 302 LENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLN--IRTAKEDFTLHLED 359
Query: 412 -GFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF---------FLP 461
+ I K+ I +H+DPE++ P F+ R+L GK + ++P
Sbjct: 360 GSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMP 419
Query: 462 FGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLP 501
FG G +C G + A E+ F ++ F +E GQ
Sbjct: 420 FGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKC 459
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 184 bits (469), Expect = 1e-52
Identities = 78/514 (15%), Positives = 167/514 (32%), Gaps = 109/514 (21%)
Query: 21 ISVLVLYKIMLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG 79
++ + + R+ PP G +P +G+ DA + K+G IF+ +
Sbjct: 1 MAKKTSSVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAA 60
Query: 80 DQLIVVLSDYRHIREAFRKEEFSGRPHTELSSILGGYEVNVFLKSLQAQAELCGATGVDV 139
I VL D + L + +
Sbjct: 61 GLYITVLLD----SNCYDA----------------------VLSDVAS------------ 82
Query: 140 NPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGL 199
L TS + V+ + ++ + +P F+ ++ ++
Sbjct: 83 --LDQTSYAQVLMKRIFNMILPSHNP-ESEKKRAE----MHFQGASLTQLSNSMQ----- 130
Query: 200 RETRKTLSKVSETLKKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRET---RKTLSKLFE 256
R ++ LK + + LF + L YL L++++E
Sbjct: 131 NNLRLLMTPSEMGLK--TSEWKKDGLFNLCY--SLLFKTGYLTVFGAENNNSAALTQIYE 186
Query: 257 TMAVVN-FLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYL 315
+ LP + +E ++ S R ++ + + + + L SY+
Sbjct: 187 EFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRK-----PREQSWLGSYV 241
Query: 316 FEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKA 375
+++ G + + Q + ++ L+ W + Y++ +P +A
Sbjct: 242 KQLQD-----------EGIDAEMQRRAMLLQLW-VTQGNAGPAAFWVMGYLLTHPEALRA 289
Query: 376 VQDELD----------------TVATILETLRRSSVVALGTIHAVTRDVKF-----NGFT 414
V++E+ + + ETLR ++ + VT+D K +
Sbjct: 290 VREEIQGGKHLRLEERQKNTPVFDSVLWETLRLTAAALI--TRDVTQDKKICLSNGQEYH 347
Query: 415 IPKNTQI-VPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF---------FLPFGV 464
+ + ++ V + MDP++ + PE F+ RFL + K F +P+G
Sbjct: 348 LRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGT 407
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQ 498
+C G A + T++ F +E
Sbjct: 408 EDNLCPGRHFAVHAIKELVFTILTRFDVELCDKN 441
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 184 bits (469), Expect = 2e-52
Identities = 47/272 (17%), Positives = 96/272 (35%), Gaps = 36/272 (13%)
Query: 249 KTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIR 308
+ + T + P + + + + + + I+ +
Sbjct: 208 TAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGA 267
Query: 309 DMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMH 368
D L + +++ + +L +ET N+L W L +
Sbjct: 268 DFLCDIYQQ---------------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSR 312
Query: 369 YPAVAKAVQDELDTV-------------------ATILETLRRSSVVALGTIHAVTRDVK 409
P + + E+ +V A + E++R + V T + +
Sbjct: 313 NPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSV-PFTTRTLDKPTV 371
Query: 410 FNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMC 469
+ +PK T + + + +E FRP R+L E K+ P LPFG+G+RMC
Sbjct: 372 LGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKI-NPFAHLPFGIGKRMC 430
Query: 470 LGDVLARMELFLFFSTLMHTFGIESPPGQPLP 501
+G LA ++L L ++ + I + +P+
Sbjct: 431 IGRRLAELQLHLALCWIIQKYDIVATDNEPVE 462
Score = 89.3 bits (222), Expect = 3e-19
Identities = 38/235 (16%), Positives = 65/235 (27%), Gaps = 55/235 (23%)
Query: 35 KVRSLPPGPWGLPIIGYLPFLKGDA-----HISFKNLSAKYGSIFSTKLGDQLIVVLSDY 89
+ + PGP P++G L + H + KYG IF KLG V L
Sbjct: 21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSP 80
Query: 90 RHIREAFRKEE-FSGRPHTELSSILGGY-------------------------------- 116
+ +R E R + +
Sbjct: 81 SLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEI 140
Query: 117 ---------EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRF----SNE 163
+ FL+ + + G D+ L IC ++ RF
Sbjct: 141 MKLDKKINEVLADFLERMDELCDERGRI-PDLYSELNKWSFESICLVLYEKRFGLLQKET 199
Query: 164 DPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYL--PGLRETRKTLSKVSETLKKC 216
+ + F+ I F M +V + K L + + +++K C
Sbjct: 200 EEEALTFITAIKTMMSTFGKM-MVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPC 253
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 176 bits (448), Expect = 2e-49
Identities = 74/542 (13%), Positives = 157/542 (28%), Gaps = 115/542 (21%)
Query: 21 ISVLVLYKIMLYIKKVRSLPPGPWG-LPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLG 79
++ + + PP G +P +GY DA + K+G IF+ +G
Sbjct: 1 MAKKTSSLLSRRRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVG 60
Query: 80 DQLIVVLSDYRHIREAFR--KEEFSGRPH-TELSSILGGYEVNVFLKSLQAQAELCGATG 136
+ + VL D + + L + ++ + S +
Sbjct: 61 GRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYSPSDEKARMKLTLLH 120
Query: 137 VDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYL 196
++ L +N+ ++ + + L F
Sbjct: 121 RELQALTEAMYTNLHAVLLGDATEAGSGWH-------------------EMGLLDFSYSF 161
Query: 197 PGLRETRKTLSKVSETL---KKCSQPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSK 253
L TL + + +E + F F +
Sbjct: 162 --------LLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQL------------- 200
Query: 254 LFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313
LP + + + + + R ++ L+S
Sbjct: 201 -------DRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARR-----AHRSKWLES 248
Query: 314 YLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVA 373
YL +E+ G + + Q + ++ L+ + W L++++ P
Sbjct: 249 YLLHLEE-----------MGVSEEMQARALVLQLW-ATQGNMGPAAFWLLLFLLKNPEAL 296
Query: 374 KAVQDELDTV--------------------------ATILETLRRSSVVALGTIHAVTRD 407
AV+ EL+++ + + E+LR ++ + V D
Sbjct: 297 AAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFI--TREVVVD 354
Query: 408 VKF-----NGFTIPKNTQIVPL-LHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF--- 458
+ F + + +++ + DPE++ PE F+ RFL P+G K +
Sbjct: 355 LAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDG 414
Query: 459 ------FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQ-PLPSLKGNAGVTI 511
+P+G G CLG A + F ++ +E +P +
Sbjct: 415 KRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFG 474
Query: 512 TP 513
Sbjct: 475 LM 476
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 144 bits (366), Expect = 3e-38
Identities = 68/304 (22%), Positives = 110/304 (36%), Gaps = 36/304 (11%)
Query: 218 QPNEGFKLFETMAVVNFLPFVKYLPGLR-ETRKTLSKLFETMAVVNFLPFVKYLPGLRET 276
+ + + F G + L FET + LP
Sbjct: 136 GKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETY-IQGLFSLPIPLPNTL-F 193
Query: 277 RKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNH 336
K+ + R + A ++ I + + D L L A+ +N +Q +
Sbjct: 194 GKSQ-RARALLLAELEKIIKARQQ--QPPSEEDALGILL----AARDDN--NQPLS---- 240
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV------------- 383
+++ I L G ET+ + L + + + + + V+ E + +
Sbjct: 241 LPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKK 300
Query: 384 -----ATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESP 438
+ E LR V G + +D +F GF PK + + H DP+L+ P
Sbjct: 301 MPYLDQVLQEVLRLIPPV-GGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDP 359
Query: 439 EDFRPTRFLTPEGKVTKPEF-FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPG 497
E F P RF P F +PFG G R CLG AR+E+ LF + L+ F PG
Sbjct: 360 EKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
Query: 498 QPLP 501
Q L
Sbjct: 420 QNLE 423
Score = 51.5 bits (124), Expect = 4e-07
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 39 LPPGPWGLPIIGY-LPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFR 97
+PPG +GLP +G L FL K ++G IF T+L + ++ +S R F
Sbjct: 13 IPPGDFGLPWLGETLNFLNDGDF--GKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFT 70
Query: 98 KEEF---SGRPHTELSSILGGY 116
KE+ + P + +LG
Sbjct: 71 KEQETFQATWPLS-TRILLGPN 91
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 139 bits (353), Expect = 1e-36
Identities = 47/293 (16%), Positives = 86/293 (29%), Gaps = 37/293 (12%)
Query: 218 QPNEGFKLFE-----TMAVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLPG 272
+ + LFE V + V K + F M ++ G
Sbjct: 127 EKADEVVLFEEAKEILCRVACYWAGVPLKE---TEVKERADDFIDMVDAFGAVGPRHWKG 183
Query: 273 LRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFN 332
R R + + I + R + L E+ +
Sbjct: 184 RR--------ARPRAEEWIEVMIEDARAGLLKTTSGTALHEMA----FHTQED--GSQLD 229
Query: 333 GKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELD--TVATILETL 390
R + ++ + I L +S + + +P + ++ + E
Sbjct: 230 ----SRMAAIELINVLR-PIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVR 284
Query: 391 RRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPE 450
R V +D +N K T ++ L+ + DP LW+ P++FRP RF E
Sbjct: 285 RYYPFGP-FLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE 343
Query: 451 GKVTKPEFFLPFGVGR----RMCLGDVLARMELFLFFSTLMHTFGIESPPGQP 499
+P G G C G+ + + L+H + P
Sbjct: 344 E---NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSL 393
Score = 46.2 bits (110), Expect = 2e-05
Identities = 22/189 (11%), Positives = 48/189 (25%), Gaps = 43/189 (22%)
Query: 45 GLPIIGYLPFLKGDAHISFKNLSAKYGS-IFSTKLGDQLIVVLSDYRHIREAFRKEEF-- 101
+ L + ++ KN + +Y S +F +L + + ++ + + + F
Sbjct: 7 HDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQR 66
Query: 102 -SGRPHTELSSILGGYEVNVF--------------------LKSL---------QAQAEL 131
+ P S+ G + K L A
Sbjct: 67 QNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRW 126
Query: 132 CGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLP 191
A V + + V C ++ + K + F
Sbjct: 127 EKADEVVLFEEAKEILCRVACYWAGV---PLKETEVKERADDFIDMVDAF-------GAV 176
Query: 192 FVKYLPGLR 200
++ G R
Sbjct: 177 GPRHWKGRR 185
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 140 bits (356), Expect = 1e-36
Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 42/296 (14%)
Query: 242 PGLRETRKTLSKLFETMAVVNFLP--FVKYL--PGLRETRKTLSKNRVEMGAYFQEKINE 297
P + + ++F T + LP + ++ + Y Q E
Sbjct: 188 PEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 247
Query: 298 HRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKN 357
R S D L+ + L + K ++ + ++ + G++T
Sbjct: 248 LRQ--KGSVHHDYRG-ILYRL-----------LGDSKMSFEDIKANVTEMLAGGVDTTSM 293
Query: 358 TLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVAL 398
TLQW L M V ++ E+ A+I ETLR + +
Sbjct: 294 TLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPIS-V 352
Query: 399 GTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF 458
+ D+ + IP T + ++A+ +P + PE+F PTR+L+ + +T
Sbjct: 353 TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNIT-YFR 411
Query: 459 FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPD 514
L FG G R CLG +A +E+ +F ++ F +E + + + + P+
Sbjct: 412 NLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTT---FNLILMPE 464
Score = 87.8 bits (218), Expect = 1e-18
Identities = 30/239 (12%), Positives = 61/239 (25%), Gaps = 57/239 (23%)
Query: 34 KKVRSL--PPGPWGLPIIGYLPFLKGDA----HISFKNLSAKYGSIFSTKLGDQLIVVLS 87
+ R P P + F + H+ KYG I+ KLG+ V +
Sbjct: 3 RSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVI 62
Query: 88 DYRHIREAFRKEE--FSGRPH--------------------------------TELSS-- 111
D + F+ E E+ +
Sbjct: 63 DPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPE 122
Query: 112 ILGGY------EVNVFLKSLQAQAELCGATG--VDVNPLLATSISNVICSIVMSVRFS-- 161
+ F+ L + + G+ D++ L I +++ R
Sbjct: 123 ATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGML 182
Query: 162 --NEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYL--PGLRETRKTLSKVSETLKKC 216
+P+ +RF+ I + F M + + ++ +
Sbjct: 183 EEVVNPEAQRFIDAIYQMFHTSVPMLNL-PPDLFRLFRTKTWKDHVAAWDVIFSKADIY 240
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 139 bits (353), Expect = 2e-36
Identities = 51/278 (18%), Positives = 91/278 (32%), Gaps = 35/278 (12%)
Query: 245 RETRKTLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDA 304
K +L + ++ + R + R + A + +N
Sbjct: 163 GRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEA----RNGLVALVADIMNGRIANPPT 218
Query: 305 SNIR-DMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSL 363
DMLD + K E + + ++ + + G T T W+L
Sbjct: 219 DKSDRDMLDVLI----AVKAETGTPRF-----SADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 364 VYMMHYPAVAKAVQDELDTV-------------------ATILETLRRSSVVALGTIHAV 404
+ +M + AV DELD + + ETLR + +
Sbjct: 270 IELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVA 328
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF-FLPFG 463
+ + G I + + + PE + P DF P R+ P + + ++PFG
Sbjct: 329 KGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFG 388
Query: 464 VGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLP 501
GR C+G A M++ FS L+ + E
Sbjct: 389 AGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESY 426
Score = 65.8 bits (161), Expect = 1e-11
Identities = 24/213 (11%), Positives = 61/213 (28%), Gaps = 49/213 (23%)
Query: 38 SLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIRE--- 94
+LP G G+L + D + + + G + + +L + +V+LS
Sbjct: 5 ALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFR 64
Query: 95 ----AFRKEE--------------FSGRPHTEL---------SSILGGY------EVNVF 121
+ + F P + G+ +V
Sbjct: 65 AGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRM 124
Query: 122 LKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNE-DPQFKRFMHLIDEGFKL 180
+ E +D+ A + ++ +F ++ D +F + H ++ G
Sbjct: 125 IADWGEAGE------IDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDP 178
Query: 181 FETMAVVNFLPFVKYLPGLRETRKTLSKVSETL 213
++ + R + + + +
Sbjct: 179 L------AYVDPYLPIESFRRRDEARNGLVALV 205
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 133 bits (337), Expect = 2e-34
Identities = 39/293 (13%), Positives = 83/293 (28%), Gaps = 38/293 (12%)
Query: 218 QPNEGFKLFETM------AVVNFLPFVKYLPGLRETRKTLSKLFETMAVVNFLPFVKYLP 271
++ + AV + G+ + + F P
Sbjct: 126 TRKGEIVFYDELHEPLTRAVCAWA-------GVPLPDDEAGNRAGELRAL-FDAAGSASP 177
Query: 272 GLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLF 331
+R R + A+ + I R S + + D+
Sbjct: 178 RHLWSRL----ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYA---------IAWHRDR-- 222
Query: 332 NGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELD-TVATILETL 390
+ + + I + + + + A+ + D + E
Sbjct: 223 HDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAELFVQEVR 282
Query: 391 RRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPE 450
R + ++D ++ G P+ Q+V L+ + D W P++FRP RF +
Sbjct: 283 RFYPFF-PAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD 341
Query: 451 GKVTKPEFFLPFGVGR----RMCLGDVLARMELFLFFSTLMHTFGIESPPGQP 499
F+P G G C G+ + + + L++ + P
Sbjct: 342 E---DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDL 391
Score = 42.8 bits (101), Expect = 2e-04
Identities = 12/81 (14%), Positives = 23/81 (28%), Gaps = 7/81 (8%)
Query: 39 LPPGPWGLPIIGY-LPFLKGDAHISFKNLSAKYGS-IFSTKLGDQLIVVLSDYRHIREAF 96
+P P L L D + + G+ F ++ + L + +
Sbjct: 1 MPKTP-HTKGPDETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFY 58
Query: 97 RKEEF---SGRPHTELSSILG 114
F P ++LG
Sbjct: 59 DTTRFEREGAMPVAIQKTLLG 79
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 133 bits (336), Expect = 5e-34
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 44/285 (15%)
Query: 251 LSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDM 310
++ M V + LP R L+ ++ E I E R + + D+
Sbjct: 191 FRGMYRRMVVPLGPLYRLPLPANRRFNDALA----DLHLLVDEIIAERRASGQKPD--DL 244
Query: 311 LDSYLFEIEKAKMENRSDQLFNGKNHDRQMQ-QIIGDLFSTGMETIKNTLQWSLVYMMHY 369
L + L +AK +N ++++ Q++ + + G ETI +T+ W L + +
Sbjct: 245 LTALL----EAKDDN--GDPIG----EQEIHDQVVA-ILTPGSETIASTIMWLLQALADH 293
Query: 370 PAVAKAVQDELDTV------------------ATILETLR-RSSVVALGTIHAVTRDVKF 410
P A ++DE++ V I+E +R R +V L + +
Sbjct: 294 PEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLT--RRAVAESEL 351
Query: 411 NGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF-FLPFGVGRRMC 469
G+ IP I+ +A+ DP+ ++ +F P R+L PE P++ PF G+R C
Sbjct: 352 GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWL-PERAANVPKYAMKPFSAGKRKC 410
Query: 470 LGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPD 514
D + +L L + L + E G G+T+ P
Sbjct: 411 PSDHFSMAQLTLITAALATKYRFEQVAGSN---DAVRVGITLRPH 452
Score = 56.5 bits (137), Expect = 1e-08
Identities = 29/218 (13%), Positives = 62/218 (28%), Gaps = 47/218 (21%)
Query: 36 VRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREA 95
+R P G+P++G+ L D ++F + +G + KLG + + +++
Sbjct: 21 LREPPVAGGGVPLLGHGWRLARDP-LAFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGAL 79
Query: 96 F--RKEEFSGRPHTELSSILGGY-----------------------------------EV 118
+G L +LG E
Sbjct: 80 ALNPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEA 139
Query: 119 NVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDP-QFKRFMHLIDEG 177
+ + Q VD V ++ ++ +E + + + G
Sbjct: 140 HALTERWQPGKT------VDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRG 193
Query: 178 FKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
+ M V + LP R L+ + + +
Sbjct: 194 M--YRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDE 229
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 129 bits (326), Expect = 1e-32
Identities = 54/283 (19%), Positives = 101/283 (35%), Gaps = 46/283 (16%)
Query: 246 ETRKTLSKLFETM-----AVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRT 300
+ + +++L+ + LP LP R + E+ F + I + R
Sbjct: 170 QLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDR----AHREIKDIFYKAIQKRRQ 225
Query: 301 TFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQ-QIIGDLFSTGMETIKNTL 359
+ + + D+L + L A ++ + D ++ +IG L + G T T
Sbjct: 226 SQEKID--DILQTLL----DATYKD--GRPLT----DDEVAGMLIGLLLA-GQHTSSTTS 272
Query: 360 QWSLVYMMHYPAVAKAVQDELDTV--------------------ATILETLRRSSVVALG 399
W ++ + K E TV I ETLR + +
Sbjct: 273 AWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM 332
Query: 400 TIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF- 458
G+TIP Q+ + W DF P R+L + + +F
Sbjct: 333 M-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL-QDNPASGEKFA 390
Query: 459 FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLP 501
++PFG GR C+G+ A +++ +ST++ + + G
Sbjct: 391 YVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPT 433
Score = 52.7 bits (127), Expect = 1e-07
Identities = 29/222 (13%), Positives = 56/222 (25%), Gaps = 51/222 (22%)
Query: 34 KKVRSLPPGPWGLPIIGYLPFLKGDAHISFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIR 93
V+S P +P +G+ +N KYG +FS + + L
Sbjct: 8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAA 67
Query: 94 E-------AFRKEEF-----------------SGRPHTEL---------SSILGGY---- 116
E+ E + +
Sbjct: 68 LLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSII 127
Query: 117 --EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNE-DPQFKRFMHL 173
E + +S E +V L+ I + ++ + + +
Sbjct: 128 EKETKEYFESWGESGE------KNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYAD 181
Query: 174 IDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
+D GF + LP LP R + ++ + K
Sbjct: 182 LDGGFSHAAWL-----LPGWLPLPSFRRRDRAHREIKDIFYK 218
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 120 bits (304), Expect = 8e-30
Identities = 54/275 (19%), Positives = 96/275 (34%), Gaps = 50/275 (18%)
Query: 250 TLSKLFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNI-- 307
+ AV FLP + LP L ++ + + R E+ E I + +
Sbjct: 176 KMESSLIPAAV--FLPILLKLP-LPQSARCH-EARTELQKILSEIIIARKEEEVNKDSST 231
Query: 308 RDMLDSYLFEIEKAKMENRSDQLFNGKN-HDRQMQ-QIIGDLFSTGMETIKNTLQWSLVY 365
D+L L A + G ++ I+ +F+ G T T WS+++
Sbjct: 232 SDLLSGLL----SAVYRD-------GTPMSLHEVCGMIVAAMFA-GQHTSSITTTWSMLH 279
Query: 366 MMHYPAVAK--AVQDELDTV-----------------ATILETLR-RSSVVALGTIHAVT 405
+MH V A++ E++ E++R ++ L V
Sbjct: 280 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM--RKVM 337
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF-FLPFGV 464
DVK + +PK I H D E + P + P R K E F+ FG
Sbjct: 338 ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD-------EKVEGAFIGFGA 390
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQP 499
G C+G +++ +T ++ + +
Sbjct: 391 GVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV 425
Score = 47.7 bits (114), Expect = 6e-06
Identities = 28/215 (13%), Positives = 64/215 (29%), Gaps = 44/215 (20%)
Query: 40 PPGPWGLPIIGYLPFLKGDAHISFKNLSAKY-GSIFSTKLGDQLIVVLSDYRHIREAF-- 96
P P +PI+G++ + + IF+ + + + ++ D F
Sbjct: 6 PVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLP 65
Query: 97 RKEEFS-GRPHTELSSILG-----------------------------GY------EVNV 120
R E S ++ + + G + EV
Sbjct: 66 RNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRK 125
Query: 121 FLKSLQAQAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKL 180
F+ + + +++ +T I N C + + +RF L+ +
Sbjct: 126 FMAANWDK----DEGEINLLEDCSTMIINTACQCLFGEDL-RKRLDARRFAQLLAKMESS 180
Query: 181 FETMAVVNFLPFVKYLPGLRETRKTLSKVSETLKK 215
AV + LP + +++ + L +
Sbjct: 181 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSE 215
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 114 bits (288), Expect = 4e-28
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 340 MQQIIGD---LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-ATILETLR-RSS 394
++ + + L G ET+ + L WS + + H P K V + + A E LR
Sbjct: 208 RERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLYPP 267
Query: 395 VVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVT 454
L + R + +P T +V + + E FRP RFL E + T
Sbjct: 268 AWILT--RRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFL--EERGT 321
Query: 455 KPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPD 514
+ PFG+G+R+CLG A +E + F ++ P + A VT+ P+
Sbjct: 322 PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV-----LAQVTLRPE 376
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 115 bits (289), Expect = 8e-28
Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 47/265 (17%)
Query: 263 FLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIR--DMLDSYLFEIEK 320
K+LPG R+ + + ++ + ++ + R D+L L K
Sbjct: 178 RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQIL----K 233
Query: 321 AKMENRSDQLFNGKNHDRQMQQIIGD---LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQ 377
A+ + D+ ++ + F G ET N L ++++ + P + +Q
Sbjct: 234 AEEGAQDDE------------GLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQ 281
Query: 378 DELDTV-------------------ATILETLR-RSSVVALGTIHAVTRDVKFNGFTIPK 417
E+D V + E+LR + + +G +P
Sbjct: 282 AEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF--RLLEEETLIDGVRVPG 339
Query: 418 NTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEF-FLPFGVGRRMCLGDVLAR 476
NT ++ + + +E P F P RF P KP F + PF +G R C+G A+
Sbjct: 340 NTPLLFSTYVMGRMDTYFEDPLTFNPDRFG-PGAP--KPRFTYFPFSLGHRSCIGQQFAQ 396
Query: 477 MELFLFFSTLMHTFGIESPPGQPLP 501
ME+ + + L+ PGQ
Sbjct: 397 MEVKVVMAKLLQRLEFRLVPGQRFG 421
Score = 38.7 bits (91), Expect = 0.004
Identities = 21/196 (10%), Positives = 58/196 (29%), Gaps = 44/196 (22%)
Query: 63 FKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKEEFS--GRPHTEL----------- 109
F + + KYG + + + V+++ +++ +++ + + L
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ 75
Query: 110 -----------------------SSILGGY------EVNVFLKSLQAQAELCGATGVDVN 140
S L + ++ L+A+A+ G T V +
Sbjct: 76 GLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKAD--GQTPVSMQ 133
Query: 141 PLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLR 200
+L + +++ + S K + + LR
Sbjct: 134 DMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLR 193
Query: 201 ETRKTLSKVSETLKKC 216
E R+++ + + +
Sbjct: 194 EVRESIRFLRQVGRDW 209
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 113 bits (285), Expect = 4e-27
Identities = 53/293 (18%), Positives = 106/293 (36%), Gaps = 38/293 (12%)
Query: 246 ETRKTLSKLFETMAVVNFLPFVKY--LPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFD 303
+ F+ + P + + ++ K++ + + EK T
Sbjct: 212 AIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEK 271
Query: 304 ASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSL 363
D + ++ + + Q I ++ +T+ +L + L
Sbjct: 272 LEECMDFATELILAEKRGDLT------------RENVNQCILEMLIAAPDTMSVSLFFML 319
Query: 364 VYMMHYPAVAKAVQDELDTV------------------ATILETLRRSSVVALGTIHAVT 405
+ +P V +A+ E+ TV I E++R VV L +
Sbjct: 320 FLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKAL 378
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
D +G+ + K T I+ + +H E + P +F F K +F PFG G
Sbjct: 379 EDDVIDGYPVKKGTNIILNIGRMH-RLEFFPKPNEFTLENFA----KNVPYRYFQPFGFG 433
Query: 466 RRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITPDSHKD 518
R C G +A + + TL+ F +++ GQ + S++ +++ PD K+
Sbjct: 434 PRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKN 486
Score = 57.4 bits (139), Expect = 5e-09
Identities = 29/242 (11%), Positives = 70/242 (28%), Gaps = 51/242 (21%)
Query: 17 LILFISVLVLYKIMLYIKKVRSLPPGPWGLPIIG----YLPFLKGDAHISFKNLSAKYGS 72
+ + +L ++++ + S PGP IG + FL + + YG
Sbjct: 24 ATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGE 83
Query: 73 IFSTKLGDQLIVVLSDYRHIREAFRKEEFSGRPHTEL----------------------- 109
+ + +++S + + +S R ++L
Sbjct: 84 FMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKT 143
Query: 110 ----------SSILGGY------EVNVFLKSLQAQAELCGATGVDVNPLLATSISNVICS 153
L + L L+ + VDV LL + + +
Sbjct: 144 TRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTN--ESGYVDVLTLLRRVMLDTSNT 201
Query: 154 IVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSETL 213
+ + + +E + D L + F K ++ K++ + + +
Sbjct: 202 LFLRIPL-DESAIVVKIQGYFDAWQALL-----IKPDIFFKISWLYKKYEKSVKDLKDAI 255
Query: 214 KK 215
+
Sbjct: 256 EV 257
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 111 bits (281), Expect = 1e-26
Identities = 55/271 (20%), Positives = 96/271 (35%), Gaps = 44/271 (16%)
Query: 254 LFETMAVVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDS 313
L E M + E ++ ++ M + I + + + + S+ D+L
Sbjct: 181 LDEAMNKLQRANPDDPAY--DENKRQFQEDIKVMNDLVDKIIADRKASGEQSD--DLLTH 236
Query: 314 YLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDL---FSTGMETIKNTLQWSLVYMMHYP 370
L K + L + I + G ET L ++L +++ P
Sbjct: 237 ML----NGKDPETGEPL--------DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNP 284
Query: 371 AVAKAVQDELDTV------------------ATILETLRRSSVVALGTIHAVTRDVKFNG 412
V + +E V + E LR +++A D G
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA-KEDTVLGG 343
Query: 413 -FTIPKNTQIVPLLHAVHMDPELW-ESPEDFRPTRFLTPEGKVTKPEF-FLPFGVGRRMC 469
+ + K +++ L+ +H D +W + E+FRP RF E P+ F PFG G+R C
Sbjct: 344 EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFKPFGNGQRAC 400
Query: 470 LGDVLARMELFLFFSTLMHTFGIESPPGQPL 500
+G A E L ++ F E L
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Score = 55.3 bits (134), Expect = 2e-08
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 41 PGPWGLPIIGYLPFLKGDAHI-SFKNLSAKYGSIFSTKLGDQLIVVLSDYRHIREAFRKE 99
P P + LP L D + + ++ + G IF + ++ LS R I+EA +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 100 EFS---GRPHTELSSILG 114
F + + G
Sbjct: 66 RFDKNLSQALKFVRDFAG 83
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 92.2 bits (230), Expect = 3e-20
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 348 FSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV-------------------ATILE 388
G ET + L + + + +P V + +Q+E+D V + E
Sbjct: 281 IFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNE 340
Query: 389 TLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLT 448
TLR + +DV+ NG IPK ++ +A+H DP+ W PE F P RF +
Sbjct: 341 TLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-S 398
Query: 449 PEGKVTKPEF-FLPFGVGRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNA 507
+ K + + PFG G R C+G A M + L ++ F + +P LK +
Sbjct: 399 KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP-LKLSL 457
Query: 508 GVTITPD 514
G + P+
Sbjct: 458 GGLLQPE 464
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 87.3 bits (216), Expect = 2e-18
Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 38/227 (16%)
Query: 323 MENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHY-----PAVAKAVQ 377
+E+ + L ++ +L ++ M+ V +
Sbjct: 263 LESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLA 322
Query: 378 DELDTV--------------------ATILETLRRSSVVALGTIHAVTRDVKFN----GF 413
+E+ +V + + E LR V +D+ F
Sbjct: 323 EEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTA-QYGRAKKDLVIESHDAAF 381
Query: 414 TIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFG-------VGR 466
+ + DP++++ ++F P RF+ EG+ G VG
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN 441
Query: 467 RMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLPSLKGNAGVTITP 513
+ C G + LF + + P L + +
Sbjct: 442 KQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP-LGSSVNFSSLR 487
Score = 39.1 bits (91), Expect = 0.003
Identities = 30/208 (14%), Positives = 57/208 (27%), Gaps = 61/208 (29%)
Query: 40 PPGPWGLPIIG-----YLPFLKGDAHISFKNLSAKYGS-IFSTKLG-------DQLIVVL 86
PG +GLPI+G + F A FK+ KY S ++ + + +V L
Sbjct: 30 IPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVAL 89
Query: 87 SDYRHI-----REAFRKEEFSGRPHTELSSILGGYEVNVFLKSLQA-------------- 127
D + + K++ + + + GGY + +L +
Sbjct: 90 LDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLK 149
Query: 128 ---------------------QAELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQ 166
+ EL D + N + +P
Sbjct: 150 SSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGT-----NPA 204
Query: 167 FKRFMHLIDEGFKLFETMAVVNFLPFVK 194
+ + L + N P +
Sbjct: 205 DTKLK---ADAPGLITKWVLFNLHPLLS 229
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 85.1 bits (211), Expect = 5e-18
Identities = 40/231 (17%), Positives = 74/231 (32%), Gaps = 28/231 (12%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
E L AY I D L + + E +++
Sbjct: 191 NTPEEMATDLEAGNNGFYAYVDPIIRARVG-----GDGDDLITLM-----VNSEINGERI 240
Query: 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILET 389
+ Q +I L G++T+ N L + ++++ +P + ++ + + E
Sbjct: 241 -----AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEM 295
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
RR VV+ V +D ++ G + + I+ +D P +R
Sbjct: 296 FRRFPVVSEA--RMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR--RS 351
Query: 450 EGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQP 499
T FG G C G LARME+ + + G+
Sbjct: 352 ISHST-------FGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET 395
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 84.9 bits (210), Expect = 8e-18
Identities = 32/247 (12%), Positives = 70/247 (28%), Gaps = 39/247 (15%)
Query: 290 YFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIGDLFS 349
+F ++ H A I+ + + G D + I+ +
Sbjct: 216 WFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCF 275
Query: 350 TGMETIKNTLQWSLVYM-MHYPAVAKAVQDELDTV---------------------ATIL 387
+K +L ++ + + + +E+ + +
Sbjct: 276 NTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVY 335
Query: 388 ETLRRSSVVALGTIHAVTRDVKFNG----FTIPKNTQIVPLLHAVHMDPELWESPEDFRP 443
E+LR V A + F + K + DP++++ PE++ P
Sbjct: 336 ESLRIEPPVPPQYGKA-KSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVP 394
Query: 444 TRFLTPEGKVTKPEFFLPFGVGR---------RMCLGDVLARMELFLFFSTLMHTFGIES 494
RF +G+ ++ + G + C G + LF L +
Sbjct: 395 DRF-VGDGE--ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFE 451
Query: 495 PPGQPLP 501
P
Sbjct: 452 IELGESP 458
Score = 34.8 bits (80), Expect = 0.072
Identities = 34/246 (13%), Positives = 71/246 (28%), Gaps = 63/246 (25%)
Query: 40 PPGPWGLPIIGYLP------FLKGDAHISFKNLSAKYGS-IFSTKL-------GDQLIVV 85
PG +G+P + + G F++ KY S +F + + ++V
Sbjct: 11 IPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIV 70
Query: 86 LSDYRHIREAF-----RKEEFSGRPHTELSSILGGYEVNVFLKSLQAQ------------ 128
L D + F K++ + + + GGY V +L + +
Sbjct: 71 LLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFML 130
Query: 129 -----------------------AELCGATGVDVNPLLATSISNVICSIVMSVRFSNEDP 165
AEL N + + + + +P
Sbjct: 131 KNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNS-----NP 185
Query: 166 QFKRFMHLIDEGFKLFETMAVVNFLPFVKY-LPGLRETRKTLSKVSETLKKCSQPNEGFK 224
+ + L + + N P + LP + + S N+ +
Sbjct: 186 EETKL---GTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYD 242
Query: 225 LFETMA 230
F+++A
Sbjct: 243 YFQSVA 248
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 83.9 bits (208), Expect = 1e-17
Identities = 46/229 (20%), Positives = 84/229 (36%), Gaps = 28/229 (12%)
Query: 275 ETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGK 334
+ T ++ + + Y I + R S + A + +
Sbjct: 189 DGSMTFAEAKEALYDYLIPIIEQRR-----QKPGTDAISIV-----ANGQVNGRPI---- 234
Query: 335 NHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRS 393
+ +++ G L G++T+ N L +S+ ++ P + + + + + E LRR
Sbjct: 235 -TSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRF 293
Query: 394 SVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV 453
S+VA G I +T D +F+G + K QI+ +D P +R
Sbjct: 294 SLVADGRI--LTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR--QKVSHT 349
Query: 454 TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQPLP 501
T FG G +CLG LAR E+ + + PG +
Sbjct: 350 T-------FGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 83.1 bits (206), Expect = 3e-17
Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 25/213 (11%)
Query: 275 ETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGK 334
+ T+ + + Y I + D L S +
Sbjct: 174 DGSMTVEQLKQAADDYLWPFIEKRMA-----QPGDDLFSRI-----LSEPVGGRPW---- 219
Query: 335 NHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRS 393
+ +++ +L G++T+ + +++ +P + +++ D + E +RR
Sbjct: 220 -TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRY 278
Query: 394 SVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKV 453
VA+ DV +G TI K + ++DP +E+PE+ R R L P
Sbjct: 279 PTVAVSRN--AVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHT 336
Query: 454 TKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
T GVG C+G LARME+ +F
Sbjct: 337 T-------MGVGAHRCVGAGLARMEVIVFLREW 362
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 81.2 bits (201), Expect = 1e-16
Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 18/218 (8%)
Query: 275 ETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGK 334
E R ++ Y I E R N L S L E L
Sbjct: 209 EARAHSLWCSEQLSQYLMPVIKERRV-----NPGSDLISIL-----CTSEYEGMAL---- 254
Query: 335 NHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRS 393
D+ + +I ++ E TL + ++++ P V + V I ETLR
Sbjct: 255 -SDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAETLRYK 313
Query: 394 SVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTR-FLTPEGK 452
V L +++D G I K+T + ++ A + DPE +E P+ F R L +
Sbjct: 314 PPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSA 372
Query: 453 VTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
+ L FG G C+G A+ E+ + + ++
Sbjct: 373 FSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKM 410
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 80.4 bits (199), Expect = 2e-16
Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 27/217 (12%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
E ++L Y I R L + + +E +
Sbjct: 192 NTPEEQGRSLEAANKGFFEYVAPIIAARR-----GGSGTDLITRI-----LNVEIDGKPM 241
Query: 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILET 389
D + ++ L G++T+ N L + ++Y+ +P ++ E + + E
Sbjct: 242 -----PDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEEL 296
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
RR +VV+ V D++F+G + + I+ +D + P +R
Sbjct: 297 FRRFAVVSDARY--VVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR--RD 352
Query: 450 EGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
T F G C G LAR+E+ +
Sbjct: 353 VTHST-------FAQGPHRCAGMHLARLEVTVMLQEW 382
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 80.0 bits (198), Expect = 2e-16
Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 8/155 (5%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
QI L G T+ N + + + +P ++ + E R +
Sbjct: 227 KSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTA 286
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
AL DV + N I+ + + D E++E+P++F R P+ +
Sbjct: 287 SALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG- 345
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G C+ + LA+ EL FSTL F
Sbjct: 346 ------FGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 80.0 bits (198), Expect = 3e-16
Identities = 44/221 (19%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
P + E KTL + E A ++E R + D+L + L + E +L
Sbjct: 189 PRVDEETKTLVASVTEGLALLHGVLDERRRNPLEN---DVL-TML-----LQAEADGSRL 239
Query: 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILET 389
+++ ++G + + G +T + ++++ ++ P + V+ E + + E
Sbjct: 240 -----STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEV 294
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
LR +++ +GT+ +D+++ G +I K + L+ + D ++ P+ F R
Sbjct: 295 LRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR--DT 352
Query: 450 EGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
+ +G G +C G LAR+E + T+ F
Sbjct: 353 SASLA-------YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 79.2 bits (196), Expect = 4e-16
Identities = 38/205 (18%), Positives = 66/205 (32%), Gaps = 24/205 (11%)
Query: 283 NRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQ 342
N Y + T L L + K + D
Sbjct: 181 NWDRDIEYMAGILENPNITTG-------LMGELSRLRKDPAYSHVS--------DELFAT 225
Query: 343 IIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSVVALGTI 401
I F G+ + + L +L+ ++ P + + ++ + + + E LR + A G
Sbjct: 226 IGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLP 285
Query: 402 HAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLP 461
T D++ + K ++ LL + DPE + +P R P L
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLA 337
Query: 462 FGVGRRMCLGDVLARMELFLFFSTL 486
FG G+ C G L R + L
Sbjct: 338 FGRGQHFCPGSALGRRHAQIGIEAL 362
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 77.3 bits (191), Expect = 2e-15
Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 28/223 (12%)
Query: 286 EMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIG 345
E+ A+ + I E RT N + + S + + + L + +
Sbjct: 183 ELVAHARTLIAERRT-----NPGNDIMSRVIMSKID-----GESL-----SEDDLIGFFT 227
Query: 346 DLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAV 404
L G++ L + + + + + + + E LR +G + V
Sbjct: 228 ILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAMVGRL--V 285
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGV 464
T++V T+ + D ++SP++ R TP ++ G
Sbjct: 286 TQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER--TPNRHLS-------LGH 336
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQPLPSLKGN 506
G CLG L R+E + + + P + L G
Sbjct: 337 GIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLMGQ 379
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 76.9 bits (190), Expect = 3e-15
Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 26/232 (11%)
Query: 260 VVNFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIE 319
PF+ + K + + Y + I+E R + L S L
Sbjct: 181 AAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRR-----TPGEDLMSGL---- 231
Query: 320 KAKMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDE 379
+E DQL + ++ L G ET N + + + M+ P A+ +
Sbjct: 232 -VAVEESGDQL-----TEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD 285
Query: 380 LDTVAT-ILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESP 438
+ I ET+R V L D+ T+PK ++ LL A H DP + +P
Sbjct: 286 GSRASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAP 344
Query: 439 EDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
+ F P R + FG G CLG LAR+E + L F
Sbjct: 345 DRFDPDR--AQIRHLG-------FGKGAHFCLGAPLARLEATVALPALAARF 387
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 76.5 bits (189), Expect = 3e-15
Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 28/222 (12%)
Query: 266 FVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMEN 325
E R++ + AY E+
Sbjct: 184 VFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNLA-------PGGFGACIHAFSD---- 232
Query: 326 RSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT 385
+ ++ + ++ L S G++T N + ++ + +P ++ +
Sbjct: 233 -TGEI-----TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLARN 286
Query: 386 -ILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPT 444
E +R S V TRDV+ G TI + +++ L + + DP W+ P+ + T
Sbjct: 287 AFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDIT 345
Query: 445 RFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
R G V FG G MC+G ++AR+E + + L
Sbjct: 346 R--KTSGHVG-------FGSGVHMCVGQLVARLEGEVVLAAL 378
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 75.8 bits (187), Expect = 5e-15
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 10/155 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
D +++ + G + I + ++ M+ +P A + + + + E +R +V
Sbjct: 223 DEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTV 282
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
T D+ G I K ++ L A + DP L + TR P V
Sbjct: 283 PYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR--EPIPHVA- 339
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G CLG LAR+EL F+ L F
Sbjct: 340 ------FGHGVHHCLGAALARLELRTVFTELWRRF 368
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 75.7 bits (187), Expect = 7e-15
Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 10/151 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
++ L G ET + S++ ++ +P A++ + V + E LR ++
Sbjct: 231 REELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYLAI 290
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
+ T D++ G I ++ + + D ++E P+ R + +
Sbjct: 291 ADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--SARHHLA- 347
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
FG G CLG LAR+EL + + L
Sbjct: 348 ------FGFGVHQCLGQNLARLELEVILNAL 372
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 75.0 bits (185), Expect = 1e-14
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSVVALGTIHAVT 405
L + G ET N + +V ++ +P V+ + E LR ++ T T
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLAT 301
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
DV+ G +I ++ + + + DP +++ P R + FG G
Sbjct: 302 EDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER--GARHHLA-------FGFG 352
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
CLG LARMEL + F TL
Sbjct: 353 PHQCLGQNLARMELQIVFDTLFRRI 377
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 75.0 bits (185), Expect = 1e-14
Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 10/155 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
D +++ + L G+ET+ + + ++ ++ P + + + + ++ E +R S
Sbjct: 232 DEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSP 291
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
V +DV +G I ++ + + D L P+ R V
Sbjct: 292 VQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR--AAVSDVG- 348
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G C+G LAR L + + TL F
Sbjct: 349 ------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 75.0 bits (185), Expect = 1e-14
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
L G ET N + + ++ +P A++ ++ + + E LR V T
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPV 319
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
V +G IP ++ +L H PE + P F R G + FG G
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR--DTAGHLA-------FGHG 370
Query: 466 RRMCLGDVLARMELFLFFSTL 486
C+G LAR+E + L
Sbjct: 371 IHFCIGAPLARLEARIAVRAL 391
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 74.6 bits (184), Expect = 1e-14
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 10/155 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
D + G L +T + ++ P ++++ V + E LR ++
Sbjct: 224 DMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTI 283
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
G TRDV+ G I K Q+V + A DP E PE F TR P +
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR--RPAPHLA- 340
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G C+G LAR+EL + F TL
Sbjct: 341 ------FGFGAHQCIGQQLARIELQIVFETLFRRL 369
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 74.6 bits (184), Expect = 1e-14
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
L G ET N + ++ ++ +P K + ++ +++ + E LR S V+ I
Sbjct: 233 LLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTA 292
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
DV ++G TIP ++ L A + D + P+ TR G V FG G
Sbjct: 293 EDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR--DASGGVF-------FGHG 343
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
CLG LAR+E + L
Sbjct: 344 IHFCLGAQLARLEGRVAIGRLFADR 368
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 74.6 bits (184), Expect = 2e-14
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
Q+ +G + G ET + + S + ++ P + ++ + D + + E LR SV
Sbjct: 236 TEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDELLRVLSV 295
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
+ D++ +G T+P + ++ LL + DPE ++ PE R T V
Sbjct: 296 ADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR--TDNHHVA- 352
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G C+G LAR+EL + TL+
Sbjct: 353 ------FGYGVHQCVGQHLARLELEVALETLLRRV 381
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 74.2 bits (183), Expect = 2e-14
Identities = 52/230 (22%), Positives = 81/230 (35%), Gaps = 23/230 (10%)
Query: 263 FLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAK 322
F V + + N + + I R D + S L I
Sbjct: 167 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRA-----TPGDDMTSLL--IAARD 219
Query: 323 MENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDT 382
E D+L +++ + + S G ET N + ++ ++ P V+ T
Sbjct: 220 DEGDGDRL-----SPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVT 274
Query: 383 VAT-ILETLRRSSVVALGTIHAVTRDVKFN-GFTIPKNTQIVPLLHAVHMDPELWESPED 440
A + ETLR V + D+ G TI + I+ A + P+ E +
Sbjct: 275 WADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADT 334
Query: 441 FRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
F TR T + + FG G CLG LARME+ L +L F
Sbjct: 335 FDATR--TVKEHLA-------FGHGVHFCLGAPLARMEVTLALESLFGRF 375
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 73.8 bits (182), Expect = 3e-14
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 39/228 (17%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
G+ E+ +E AYFQ NE + + L S L
Sbjct: 201 GGVVESWDQRKTELLECAAYFQVLWNERV----NKDPGNDLISMLAHSP----------- 245
Query: 331 FNGKNHDRQM--QQIIGD---LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT 385
R M ++ +G+ L G +T +N++ ++ + P ++ V T
Sbjct: 246 -----ATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALVET 300
Query: 386 -ILETLR-RSSVVALG-TIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFR 442
+ E +R ++ + + T D + G TI K ++V ++ + D E+ + PE+F
Sbjct: 301 MVPEIIRWQTPLAHMRRT---AIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFI 357
Query: 443 PTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
R +P L FG G C+G+ LA M+L + + ++ F
Sbjct: 358 IDR--------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 73.0 bits (180), Expect = 5e-14
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 9/145 (6%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
++ G I + + P V A +++ A I E +R + T
Sbjct: 230 FYAVGHMAIGYLIASGIELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLS-FLRFPT 288
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
DV+ G I + I ++ A + DPE+++ P+ F TR ++ FG+G
Sbjct: 289 EDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASRNLS-------FGLG 341
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
C G +++R E F+ L +
Sbjct: 342 PHSCAGQIISRAEATTVFAVLAERY 366
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 71.8 bits (177), Expect = 7e-14
Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 15/160 (9%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTR 406
L G ET N + + + P + + ETLR S +
Sbjct: 185 LIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSG--FVEETLRYYSPIQFLPHRFAAE 242
Query: 407 DVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGR 466
D N I K Q++ L + + D ++ P+ F+ R E L FG+G
Sbjct: 243 DSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR----------REMHLAFGIGI 292
Query: 467 RMCLGDVLARMELFLFFSTLMHTF-GIE--SPPGQPLPSL 503
MCLG LAR+E + + +++ F I+ + L +
Sbjct: 293 HMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNK 332
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 71.9 bits (177), Expect = 1e-13
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
+ G ET ++TL ++ +Q + + I E LR ++ V T
Sbjct: 227 ILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVL-T 285
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
D +F+G + +++ L + + D ++ PE F R P + FG G
Sbjct: 286 ADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR--NPNSHLA-------FGFG 336
Query: 466 RRMCLGDVLARMELFLFFSTL 486
CLG+ LAR+EL L +
Sbjct: 337 THFCLGNQLARLELSLMTERV 357
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 71.9 bits (177), Expect = 1e-13
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSV 395
D +++ ++ + G ET + L ++ +P +++ + + E LR S
Sbjct: 240 DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPT 299
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
+ + D + NG IP T + H H DP ++ + F T +
Sbjct: 300 LPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV--------KR 351
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
+ FG G CLG LAR+EL + L
Sbjct: 352 EAPSIAFGGGPHFCLGTALARLELTEAVAAL 382
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 71.9 bits (177), Expect = 1e-13
Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 11/142 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLR-RSSVVALGTIHAV 404
L G E+ + + +M P + + + D + + + + E R V
Sbjct: 251 LLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYA 310
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGV 464
DV G TI ++ A + D + + R TP + FG
Sbjct: 311 VEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR--TPNQHLG-------FGH 361
Query: 465 GRRMCLGDVLARMELFLFFSTL 486
G CLG LAR+EL + L
Sbjct: 362 GVHHCLGAPLARVELQVALEVL 383
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 71.6 bits (176), Expect = 1e-13
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 14/149 (9%)
Query: 346 DLFST---GMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSVVALGTI 401
G E NT+ +++ + P +A+ + D+ + E LR + L
Sbjct: 215 PALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAAQRTVAEVLRLHPALHLERR 274
Query: 402 HAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLP 461
A T +V+ I + ++V ++ A + DPE++ P+ R
Sbjct: 275 TA-TAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDADR---------AL 324
Query: 462 FGVGRRMCLGDVLARMELFLFFSTLMHTF 490
+ L
Sbjct: 325 SAHRGHPGRLEELVTALATAALRAAAKAL 353
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 70.8 bits (174), Expect = 2e-13
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
+ G ET ++ + ++ + P + A++D V T + E LR +S + T
Sbjct: 251 VLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAMH-VLRVTT 309
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
DV NG +P T +V L A + DP ++ P+ F P R KP + FG G
Sbjct: 310 ADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR---------KPNRHITFGHG 360
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
CLG LAR+EL + L
Sbjct: 361 MHHCLGSALARIELSVVLRVLAERV 385
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 70.8 bits (174), Expect = 2e-13
Identities = 41/217 (18%), Positives = 73/217 (33%), Gaps = 24/217 (11%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
P + ++ + AY + + E R + D L S L E L
Sbjct: 177 PTDPALAERIADVLNPLTAYLKARCAERRA-----DPGDDLISRL-----VLAEVDGRAL 226
Query: 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILET 389
D + L G T L + + +PA A ++ + + E
Sbjct: 227 -----DDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEV 281
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
LR T+ + G IP + + + + + D + + P+ F P+R
Sbjct: 282 LRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGG 340
Query: 450 EGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
+++ FG G CLG LAR+E + +
Sbjct: 341 AAQLS-------FGHGVHFCLGAPLARLENRVALEEI 370
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 70.7 bits (174), Expect = 2e-13
Identities = 42/214 (19%), Positives = 79/214 (36%), Gaps = 27/214 (12%)
Query: 274 RETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNG 333
E + E Y + + R + L + + + +
Sbjct: 173 AEDMRRGHAAIAEFADYVERALARRRR-----EGGEDLLALMLDAH------DRGLM--- 218
Query: 334 KNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRR 392
++ + TG ET+ + + +++ ++ +P ++ D +A + E LR
Sbjct: 219 --SRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEECLRY 276
Query: 393 SSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGK 452
V T DV+ G + ++ +V L A + DP ++ P+DF R P
Sbjct: 277 DPSVQSNTRQL-DVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER--DPVPS 333
Query: 453 VTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
++ FG G R CLG LAR +L + L
Sbjct: 334 MS-------FGAGMRYCLGSYLARTQLRAAVAAL 360
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 70.7 bits (174), Expect = 3e-13
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 11/155 (7%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSV 395
++ I L G ET N + + ++ +P + + V+ ++ E LR +SV
Sbjct: 230 HDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSGVVEELLRFTSV 289
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTK 455
+ D++ G TI ++ + ++ D + +E+P+ F R V
Sbjct: 290 SD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--NARHHVG- 345
Query: 456 PEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
FG G CLG LAR EL + L
Sbjct: 346 ------FGHGIHQCLGQNLARAELEIALGGLFARI 374
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 70.4 bits (173), Expect = 3e-13
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 15/186 (8%)
Query: 311 LDSYLFEIEKAKMENRSD----QLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYM 366
L Y+ + + K +L +G+ + ++ + L G++++ + + +V +
Sbjct: 198 LFGYVAGLVEHKRAEPGPDIISRLNDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLL 257
Query: 367 MHYPAVAKAVQDELDTVATIL-ETLR-RSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPL 424
+P A + D +A + E LR + ++ + D++F G TI ++
Sbjct: 258 AAHPDQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFD 317
Query: 425 LHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFS 484
L + D + PE+F R TP +T FG G C+G LAR+EL F+
Sbjct: 318 LGLPNFDERAFTGPEEFDAAR--TPNPHLT-------FGHGIWHCIGAPLARLELRTMFT 368
Query: 485 TLMHTF 490
L
Sbjct: 369 KLFTRL 374
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 70.3 bits (173), Expect = 3e-13
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 274 RETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNG 333
R+ + V+ AYF+E I + + + + + S L + D+L
Sbjct: 174 RKALTEGNIMAVQAMAYFKELIQKRKR-----HPQQDMISMLLKGR------EKDKL--- 219
Query: 334 KNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRR 392
+ + L G ET N + S++ ++ +P +++ D + T + E LR
Sbjct: 220 --TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRY 277
Query: 393 SSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGK 452
S + T + D+ G TI + Q+ LL A + DP ++ +P+ F TR
Sbjct: 278 ESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR------- 329
Query: 453 VTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
P L FG G +CLG LAR+E + +TL+
Sbjct: 330 --SPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 71.0 bits (173), Expect = 4e-13
Identities = 77/456 (16%), Positives = 142/456 (31%), Gaps = 116/456 (25%)
Query: 34 KKVRSLPPGPW----GLPIIGYLPFLK----GDAHISFKNLSAKYGSIFSTKLG-----D 80
+ + L P G+ G K D +S+K IF L +
Sbjct: 142 QALLELRPAKNVLIDGVLGSG-----KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 81 QLIVVLSD-YRHIREAFRKEEFSGRPHTELSSILGGYEVNVFLKSLQAQAELCGATGV-- 137
++ +L I ++ R + L + + L+ L V
Sbjct: 197 TVLEMLQKLLYQI-----DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 138 DV-NPLLATSISNVICSIVMSVRFSN------EDPQFKRFMHLIDEGFKLFETMAVVNFL 190
+V N + N+ C I+++ RF + E ++
Sbjct: 252 NVQNAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---- 306
Query: 191 PFVKY-------LP----------------GLRETRKT--------LSKVSETLKKCS-- 217
+KY LP +R+ T K++ ++
Sbjct: 307 -LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 218 -QPNEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKL------FETMAVVNFL------ 264
+P E K+F+ ++V F P +P LS + + M VVN L
Sbjct: 366 LEPAEYRKMFDRLSV--FPPSAH-IP-----TILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 265 -----PFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNI-RDMLDSYLFE- 317
+P + K +N + + N +T FD+ ++ LD Y +
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT-FDSDDLIPPYLDQYFYSH 476
Query: 318 ----IEKAKMENRSDQLFNGKNHD-RQMQQ-IIGDLFS-TGMETIKNTLQWSLVYMMH-- 368
++ + R LF D R ++Q I D + +I NTLQ Y +
Sbjct: 477 IGHHLKNIEHPERMT-LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 369 -----YPAVAKAVQDELDTVATILETLRRSSVVALG 399
Y + A+ D L + L + + ++ +
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA 571
Score = 34.8 bits (79), Expect = 0.071
Identities = 25/224 (11%), Positives = 49/224 (21%), Gaps = 71/224 (31%)
Query: 339 QMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLRR------ 392
+ Q D+ S + + V M ++K D + + R
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72
Query: 393 ---SSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPE------------LWES 437
+V + + KF ++ + P L+
Sbjct: 73 SKQEEMVQKFVEEVLRINYKF----------LMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 438 PEDFRP---TRF------------LTPEGKVT--------------------KPEFFLPF 462
+ F +R L P V K + + F
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 463 GV-----GRRMCLGDVLARMELFLFFSTLMHTFGIESPPGQPLP 501
+ VL ++ L+ T + L
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 69.6 bits (171), Expect = 5e-13
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSV 395
D ++ + + + G ET + + ++V + +P V + + ETLR S+
Sbjct: 229 DAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTP 288
Query: 396 VALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPEL-WESPEDFRPTRFLTPEGKVT 454
+ I DV IP ++ A+ D + + F TR T +
Sbjct: 289 TSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTR--TSGNR-- 344
Query: 455 KPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
+ FG G +C G L+RME + L F
Sbjct: 345 ----HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 69.1 bits (170), Expect = 6e-13
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 14/158 (8%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLR-RSSVVALGTIHAVT 405
L G ET N + S++ + + ++ L A I E LR V+
Sbjct: 206 LLIAGNETTTNLISNSVIDFTRFNLWQRIREENLYLKA-IEEALRYSPPVMRTVRK--TK 262
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
VK TI + + + + + D E++ E F P R P ++ FG G
Sbjct: 263 ERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR--NPNPHLS-------FGSG 313
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQPLPS 502
+CLG LAR+E + F IE + +P+
Sbjct: 314 IHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVPN 351
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 69.2 bits (170), Expect = 9e-13
Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 26/221 (11%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQL 330
E YF+ +++ + RD L + L + + L
Sbjct: 190 ARDGRGYARAEAASQEFTRYFRREVDRRGG-----DDRDDLLTLL-----VRARDTGSPL 239
Query: 331 FNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILET 389
+ L + G ET N L +++ + + V ++ ++ + E
Sbjct: 240 -----SVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEEL 294
Query: 390 LRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTP 449
+R V T D++ IP+ +++V LL + + DP + P+ R
Sbjct: 295 MRYDPPVQAVT-RWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHR--AA 351
Query: 450 EGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
E +V FG+G CLG LAR E + L+
Sbjct: 352 ERQVG-------FGLGIHYCLGATLARAEAEIGLRALLDGI 385
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 68.8 bits (169), Expect = 9e-13
Identities = 47/217 (21%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 286 EMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENRSDQLFNGKNHDRQMQQIIG 345
M AYF I RT D S+L A + D +
Sbjct: 199 SMMAYFTGLIERRRT-----EPADDAISHLVA---AGVGADGDTA-----GTLSILAFTF 245
Query: 346 DLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAV 404
+ + G +T+ L S+ + P + + D+ + + + E LR +S V G
Sbjct: 246 TMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPV-QGLARTT 304
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELW-ESPEDFRPTRFLTPEGKVTKPEFFLPFG 463
TRDV TIP +++ L + + D + + TR P +T F
Sbjct: 305 TRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTR--CPRNILT-------FS 355
Query: 464 VGRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQP 499
G CLG ARM+ + + L+ E +
Sbjct: 356 HGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRI 392
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 68.9 bits (169), Expect = 1e-12
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
+ + G +T ++ +++ + P + + + + E +R ++ V +
Sbjct: 264 IATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPALIPRLVDEAVRWTAPVK-SFMRTAL 322
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
D + G I + +I+ + + D E++ +P++F TR P + FG G
Sbjct: 323 ADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR--FPNRHLG-------FGWG 373
Query: 466 RRMCLGDVLARMELFLFFSTL 486
MCLG LA++E+ +FF L
Sbjct: 374 AHMCLGQHLAKLEMKIFFEEL 394
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 68.4 bits (168), Expect = 1e-12
Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
L G E + + ++ +P V+ + + + E LR + T
Sbjct: 238 LLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPE-TTTRFAA 296
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
+V+ G IP+ + ++ A + DP+ + P F TR G ++ FG G
Sbjct: 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--DTRGHLS-------FGQG 347
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
C+G LA++E + L F
Sbjct: 348 IHFCMGRPLAKLEGEVALRALFGRF 372
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 68.1 bits (167), Expect = 2e-12
Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 30/224 (13%)
Query: 271 PGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLF--EIEKAKMENRSD 328
P L + ++GAY + R N D L S L E++ ++
Sbjct: 210 PDLATDFDEFMQVSADIGAYATALAEDRR-----VNHHDDLTSSLVEAEVDGERLS---- 260
Query: 329 QLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTV--ATI 386
R++ L G ET +N + ++ + YP + D + +
Sbjct: 261 --------SREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAV 312
Query: 387 LETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRF 446
E +R +S V +T+D++ G + ++ + + D + P F R
Sbjct: 313 EEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR- 370
Query: 447 LTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTLMHTF 490
P + F G G CLG LAR E+ + F L
Sbjct: 371 -NPNPHLG---F---GGGGAHFCLGANLARREIRVAFDELRRQM 407
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 68.1 bits (167), Expect = 2e-12
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 11/145 (7%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVAT-ILETLRRSSVVALGTIHAVT 405
S G +T + + + + P + V+ + + + + E +R ++ V +
Sbjct: 286 TASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQH-FMRTAA 344
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
D + G I ++ A + DP + P F PTR + FG G
Sbjct: 345 TDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR--PANRHLA-------FGAG 395
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
CLG LAR+E+ + L+
Sbjct: 396 SHQCLGLHLARLEMRVLLDVLLDRV 420
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 67.2 bits (165), Expect = 3e-12
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 15/145 (10%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLRRSSVVALGTIHAVT 405
E + L +++ ++ +P ++++ + + + E LR +S+V
Sbjct: 223 NLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPELIDSATEEVLRHASIVEAPAPRVAL 282
Query: 406 RDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVG 465
DV+ G I + + A + P + F TR + FG G
Sbjct: 283 ADVRMAGRDIHAGDVLTCSMLATNRAP-----GDRFDITR--EKATHMA-------FGHG 328
Query: 466 RRMCLGDVLARMELFLFFSTLMHTF 490
C+G LAR++L + ++ F
Sbjct: 329 IHHCIGAPLARLQLRVALPAVVGRF 353
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 66.8 bits (164), Expect = 3e-12
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQD-ELDTVATILETLR-RSSVVALGTIHAV 404
L G ET N + ++ Y + + L V E LR V+ +
Sbjct: 207 LMIAGNETTTNLIGNAIEDFTLYNSWDYVREKGALKAVE---EALRFSPPVMRTIRV--T 261
Query: 405 TRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGV 464
VK I + + + + + D E+++ P+ F P R TP ++ FG
Sbjct: 262 KEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR--TPNPHLS-------FGS 312
Query: 465 GRRMCLGDVLARMELFLFFSTLMHTF-GIESPPGQPLPS 502
G +CLG LAR+E + F E + + +
Sbjct: 313 GIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKIDN 351
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 67.3 bits (165), Expect = 4e-12
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 12/152 (7%)
Query: 337 DRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATIL-ETLR-RSS 394
+ + + G L G N Q L ++ + +++ T L E LR S
Sbjct: 232 ETEAVGLAGPLQIGGEAVTHNVGQ-MLYLLLTRRELMARMRERPGARGTALDELLRWISH 290
Query: 395 VVALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVT 454
++G DV+ +G I + A + DP+++ P+ R P +
Sbjct: 291 RTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR--DPNPHLA 348
Query: 455 KPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
+G G C G VLARM+ L TL
Sbjct: 349 -------YGNGHHFCTGAVLARMQTELLVDTL 373
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 65.4 bits (160), Expect = 2e-11
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 347 LFSTGMETIKNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTR 406
L G ET +N++ ++ +P + + A E +R ++ V A R
Sbjct: 265 LAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA-ADEIVRWATPVTAFQRTA-LR 322
Query: 407 DVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGR 466
D + +G I K ++V + + D E+++ P F R P V F G G
Sbjct: 323 DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR--NPNPHVG---F---GGTGA 374
Query: 467 RMCLGDVLARMELFLFFSTLMHTF 490
C+G LARM + L F+ +
Sbjct: 375 HYCIGANLARMTINLIFNAVADHM 398
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 64.6 bits (158), Expect = 2e-11
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 388 ETLRRSSVV-ALGTIHAVTRDVKFNGFTIPKNTQIVPLLHAVHMDPELWESPEDFRPTRF 446
E LR A+G DV+ G I + A + DPE++ P+ R
Sbjct: 280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER- 338
Query: 447 LTPEGKVTKPEFFLPFGVGRRMCLGDVLARMELFLFFSTL 486
+P V+ FG G C G +LAR+E L +
Sbjct: 339 -SPNPHVS-------FGFGPHYCPGGMLARLESELLVDAV 370
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.1 bits (127), Expect = 2e-07
Identities = 70/463 (15%), Positives = 133/463 (28%), Gaps = 149/463 (32%)
Query: 57 GDAHISFKNLSAKYGSIFSTKLGD-------QLIVVLSDYRHIREAFRK--------EEF 101
G+ F+ L Y + +GD L ++ + F + E
Sbjct: 164 GNTDDYFEELRDLY-QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENP 222
Query: 102 SGRPHTE-LSSI-----------LGGYEVNVFLKSL-----QAQAELCGATGVDVNPLLA 144
S P + L SI L Y V K L + ++ L GATG
Sbjct: 223 SNTPDKDYLLSIPISCPLIGVIQLAHYVV--TAKLLGFTPGELRSYLKGATGH------- 273
Query: 145 TSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLR--ET 202
++ ++ ++ ++ F +V + + ++ G+R E
Sbjct: 274 --SQGLVTAVAIAE--TDSWESFFV---------------SVRKAITVLFFI-GVRCYEA 313
Query: 203 RKTLSKVSETLKKCSQPNEGFKLFET-MAVVNFLPFVKYLPGLRETRKTLSKLFETMAVV 261
S L+ + NEG + M ++ L T ++ + +
Sbjct: 314 YPNTSLPPSILEDSLENNEGV---PSPMLSIS---------NL-----TQEQVQDYVNKT 356
Query: 262 NFLPFVKYLPGLRETRKTLSKNRVEMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKA 321
N +LP ++ +L +N + + + L + KA
Sbjct: 357 N-----SHLPAGKQVEISL--------------VNGAKNLVVSGPPQS-LYGLNLTLRKA 396
Query: 322 KMENRSDQLFNGKNHDRQMQQIIGDLFSTGMETIKNTLQWSLVYMMHY--PAVAKAVQDE 379
K + DQ + + + + F L + + H PA +D
Sbjct: 397 KAPSGLDQ---SRIPFSERKLKFSNRF----------LPVASPFHSHLLVPASDLINKD- 442
Query: 380 LDTVATILETLRRSSVVALGT--IHAVT-RDVKFNGFTIPKNTQIVPLL--HAVHMDPEL 434
+ + + D++ +I + IV + V
Sbjct: 443 ---LVKNNVSFNAKD---IQIPVYDTFDGSDLRVLSGSISER--IVDCIIRLPVK----- 489
Query: 435 WESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDVLARM 477
WE+ F+ T L FG G LG + R
Sbjct: 490 WETTTQFKATHILD-------------FGPGGASGLGVLTHRN 519
Score = 46.6 bits (110), Expect = 2e-05
Identities = 98/582 (16%), Positives = 186/582 (31%), Gaps = 199/582 (34%)
Query: 58 DAHISFKNLSAKYGSI-FSTKLGDQLIVVLSDYRH---IREAFRK------EEFSG--RP 105
DA+ S + L+ +GS+ L+V + + ++E F K E F+ P
Sbjct: 2 DAY-STRPLTLSHGSLEHV------LLVPTASFFIASQLQEQFNKILPEPTEGFAADDEP 54
Query: 106 HT--EL--------------------------------SSILGGYEVNVFLKSLQAQAEL 131
T EL + L G +++ L + +
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDT 114
Query: 132 CGATGVDVNPLLATSISNVICSIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLP 191
++ I N I + +M+ R ++ F + + +L A+
Sbjct: 115 TLVKTKEL-------IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLV---AI----- 159
Query: 192 F------VKYLPGLRETRKT--------LSKVSETLKKCS-QPNEGFKLF-ETMAVVNFL 235
F Y LR+ +T + +ETL + + K+F + + ++ +L
Sbjct: 160 FGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWL 219
Query: 236 ------PFVKYL-------PGLRETRKTLSKL--FETMA-VVNFLP--FVKYLPGLR--- 274
P YL P + + +L + A ++ F P YL G
Sbjct: 220 ENPSNTPDKDYLLSIPISCPLI-----GVIQLAHYVVTAKLLGFTPGELRSYLKGATGHS 274
Query: 275 ------------ETRKTLSKNRVEM-------GAYFQEKINEHRTTFDASNIRDMLD--- 312
++ ++ + + G E T+ S + D L+
Sbjct: 275 QGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYP--NTSLPPSILEDSLENNE 332
Query: 313 ---SYLFEI---EKAKMENRSDQLFNGKNHDRQMQQI-IGDLFSTGMETIKNTLQWSLVY 365
S + I + ++++ ++ N H +Q+ I L N + +LV
Sbjct: 333 GVPSPMLSISNLTQEQVQDYVNK-TNS--HLPAGKQVEIS-LV--------NGAK-NLV- 378
Query: 366 MMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTRDVKF-NGF---TIPKNTQI 421
V+ Q L + L + S + I R +KF N F P ++
Sbjct: 379 ------VSGPPQS-LYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHS-- 429
Query: 422 VPLLH-AVHM-DPELWESPEDFRPTR-----FLTPEGKVTKPEFFLPFGVGRRMCLGDVL 474
LL A + + +L ++ F + T +G + L + R+ D +
Sbjct: 430 -HLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRV---LSGSISERIV--DCI 483
Query: 475 ARM----ELFLFFSTLMH--TFGIESPPGQPLPSLKGNAGVT 510
R+ E F H FG PG G +G+
Sbjct: 484 IRLPVKWETTTQFKAT-HILDFG----PG-------GASGLG 513
Score = 37.7 bits (87), Expect = 0.011
Identities = 48/319 (15%), Positives = 91/319 (28%), Gaps = 127/319 (39%)
Query: 153 SIVMSVRFSNEDPQFKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSKVSET 212
SI+ V +P ++G ++ E + + F + G +T K +++E
Sbjct: 1660 SILDIVI---NNPVNLTIHFGGEKGKRIRENYSA---MIFETIVDGKLKTEKIFKEINEH 1713
Query: 213 LKKC--SQPNEGFKLFET------MAVVNFLPFVKYLPGLRETRKTLSKLFETMA----- 259
L T + ++ F L+ K L T A
Sbjct: 1714 STSYTFRSEKG--LLSATQFTQPALTLMEKAAFED----LKS--KGLIPADATFAGHSLG 1765
Query: 260 -------VVNFLPF------VKY---LPGLRETRKTLSKNRVEMGAYFQEKINEHR--TT 301
+ + + V Y + R L ++ M A IN R +
Sbjct: 1766 EYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIA-----INPGRVAAS 1820
Query: 302 FDASNIRDMLDS------YLFEIEKAKMENRSDQLFNGKNHDRQMQQII--GDLFSTGME 353
F ++ +++ +L EI N +N +N QQ + GDL
Sbjct: 1821 FSQEALQYVVERVGKRTGWLVEI--V---N-----YNVEN-----QQYVAAGDL------ 1859
Query: 354 TIKNTLQWSLVYMMHYPAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTRDVKFNGF 413
+A LDTV +L ++
Sbjct: 1860 --------------------RA----LDTVTNVLNFIKL--------------------- 1874
Query: 414 TIPKNTQIVPLLHAVHMDP 432
+ I+ L ++ ++
Sbjct: 1875 ---QKIDIIELQKSLSLEE 1890
Score = 30.8 bits (69), Expect = 1.5
Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 60/127 (47%)
Query: 366 M-MH-Y--PAVAKAVQDELDTVATILETLRRSSVVALGTIHAVTRDVKFNGFTIPKNTQI 421
M M Y A+ V + D +T GF+I I
Sbjct: 1631 MGMDLYKTSKAAQDVWNRAD--NHFKDTY---------------------GFSI---LDI 1664
Query: 422 V---PLLHAVHMDPE------------LWESPEDFRPTR---------------FLTPEG 451
V P+ +H E ++E+ D + F + +G
Sbjct: 1665 VINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKG 1724
Query: 452 KVTKPEF 458
++ +F
Sbjct: 1725 LLSATQF 1731
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 35.1 bits (80), Expect = 0.031
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 274 RETRKTLSKNRV-EMGAYFQEKINEHRTTFDASNIRDMLDSYLFEIEKAKMENR-SDQLF 331
RE ++ R+ E+ A + E R ++ + ++EK K+ NR +D+ F
Sbjct: 91 REEQRK----RLQELDAASKVMEQEWREKA-KKDLEEWNQRQSEQVEKNKINNRIADKAF 145
>1m2k_A Silent information regulator 2; protein-ligand complex, gene
regulation; HET: APR; 1.47A {Archaeoglobus fulgidus}
SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A*
1ici_A*
Length = 249
Score = 29.1 bits (66), Expect = 3.2
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 11/53 (20%)
Query: 434 LWESPEDFRPTRFLTPEGKVTKPEFFLPFGVGRRMCLGDV--------LARME 478
LW +RP P+ PE + R + + A +E
Sbjct: 38 LWN---RYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELE 87
>2b9s_A Topoisomerase I-like protein; vanadate complex, isomerase/DNA
complex; HET: DNA; 2.27A {Leishmania donovani}
Length = 432
Score = 28.5 bits (63), Expect = 7.0
Identities = 7/42 (16%), Positives = 20/42 (47%)
Query: 167 FKRFMHLIDEGFKLFETMAVVNFLPFVKYLPGLRETRKTLSK 208
F+ + ++D+ + + +F P ++ RE + + +K
Sbjct: 82 FESWREILDKRQHPIRRLELCDFEPIYQWHLVQREKKLSRTK 123
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.409
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,888,221
Number of extensions: 482206
Number of successful extensions: 1196
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1013
Number of HSP's successfully gapped: 133
Length of query: 520
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 422
Effective length of database: 3,965,535
Effective search space: 1673455770
Effective search space used: 1673455770
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (26.4 bits)