Query psy4822
Match_columns 124
No_of_seqs 114 out of 1100
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 18:37:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00014 myosin-A; Provisional 100.0 1E-32 2.2E-37 241.4 8.3 100 1-102 473-574 (821)
2 cd01381 MYSc_type_VII Myosin m 100.0 3.5E-32 7.6E-37 234.4 9.2 100 1-102 373-474 (671)
3 cd01387 MYSc_type_XV Myosin mo 100.0 3.8E-32 8.2E-37 234.3 8.7 101 1-103 372-474 (677)
4 cd01383 MYSc_type_VIII Myosin 100.0 5.3E-32 1.1E-36 233.4 8.7 99 1-101 376-476 (677)
5 cd01384 MYSc_type_XI Myosin mo 100.0 4.9E-32 1.1E-36 233.5 8.3 101 1-103 378-480 (674)
6 cd01385 MYSc_type_IX Myosin mo 100.0 5.7E-32 1.2E-36 233.7 8.3 101 1-103 387-490 (692)
7 cd01382 MYSc_type_VI Myosin mo 100.0 1.5E-31 3.4E-36 231.7 8.1 101 1-103 408-510 (717)
8 cd01378 MYSc_type_I Myosin mot 100.0 4.4E-31 9.4E-36 227.7 8.3 100 1-102 377-480 (674)
9 cd01380 MYSc_type_V Myosin mot 100.0 6.1E-31 1.3E-35 227.3 8.4 100 1-103 379-482 (691)
10 cd01379 MYSc_type_III Myosin m 100.0 1.1E-30 2.3E-35 224.6 8.2 99 1-102 384-484 (653)
11 smart00242 MYSc Myosin. Large 100.0 1.1E-30 2.4E-35 225.4 8.2 99 1-101 380-480 (677)
12 cd01377 MYSc_type_II Myosin mo 100.0 1.6E-30 3.6E-35 224.7 8.8 95 1-97 385-482 (693)
13 COG5022 Myosin heavy chain [Cy 100.0 1.4E-30 2.9E-35 233.3 7.7 101 1-103 439-544 (1463)
14 cd00124 MYSc Myosin motor doma 100.0 1E-29 2.2E-34 219.3 7.8 99 1-101 373-473 (679)
15 cd01386 MYSc_type_XVIII Myosin 100.0 6E-29 1.3E-33 216.7 8.4 98 1-100 384-504 (767)
16 KOG0164|consensus 100.0 1E-28 2.2E-33 210.6 6.3 101 1-103 386-489 (1001)
17 PF00063 Myosin_head: Myosin h 99.9 2.2E-28 4.8E-33 210.8 6.6 99 1-101 375-477 (689)
18 KOG0161|consensus 99.9 1.7E-27 3.7E-32 219.7 6.3 98 1-101 459-560 (1930)
19 KOG0163|consensus 99.9 2.8E-26 6.1E-31 196.8 6.3 102 1-104 462-565 (1259)
20 KOG0160|consensus 99.9 4.4E-25 9.5E-30 192.8 7.8 100 1-103 379-480 (862)
21 KOG0162|consensus 99.9 7.3E-25 1.6E-29 187.6 6.0 108 1-108 394-506 (1106)
22 KOG4229|consensus 99.9 1.5E-22 3.3E-27 180.2 5.7 101 1-103 438-540 (1062)
No 1
>PTZ00014 myosin-A; Provisional
Probab=99.97 E-value=1e-32 Score=241.45 Aligned_cols=100 Identities=31% Similarity=0.431 Sum_probs=97.6
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|+.||++|..|||+|..|+|.||++|||||+++|.|||+||||||+ +|++
T Consensus 473 E~f~~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~--~p~~ 550 (821)
T PTZ00014 473 EVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCL--APGG 550 (821)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhC--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDP 102 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~ 102 (124)
||++ +||++.+++|+.|.+|+.
T Consensus 551 tD~~f~~kl~~~~~~~~~f~~~~~ 574 (821)
T PTZ00014 551 TDEKFVSSCNTNLKNNPKYKPAKV 574 (821)
T ss_pred CHHHHHHHHHHHhcCCCCccCCCC
Confidence 9999 999999999999998874
No 2
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=99.97 E-value=3.5e-32 Score=234.36 Aligned_cols=100 Identities=39% Similarity=0.728 Sum_probs=97.4
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|+.+|++|..|||+|..|+|.||++|||||+++|.|||+||||||+ +|++
T Consensus 373 E~f~~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~--~p~~ 450 (671)
T cd01381 373 ENFDVNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESK--FPKG 450 (671)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDP 102 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~ 102 (124)
||++ +||++.+++|+.|.+|+.
T Consensus 451 td~~f~~kl~~~~~~~~~~~~~~~ 474 (671)
T cd01381 451 TDQTMLEKLHSQHGLHSNYLKPKS 474 (671)
T ss_pred CHHHHHHHHHHHhcCCCCcccCCC
Confidence 9999 999999999999998864
No 3
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=99.97 E-value=3.8e-32 Score=234.31 Aligned_cols=101 Identities=43% Similarity=0.696 Sum_probs=97.8
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|+.+|++|..|||+|..|+|.||++|||||+++|.|||+||||||. +|++
T Consensus 372 E~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~--~p~~ 449 (677)
T cd01387 372 EDLSFNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCC--FPQA 449 (677)
T ss_pred ccCCCCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
||++ +|++..|++|+.|.+|+..
T Consensus 450 td~~~~~kl~~~~~~~~~~~~~~~~ 474 (677)
T cd01387 450 TDHTFLQKCHYHHGANPLYSKPKMP 474 (677)
T ss_pred chHHHHHHHHHhccCCccccCCCCC
Confidence 9999 9999999999999988653
No 4
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=99.97 E-value=5.3e-32 Score=233.40 Aligned_cols=99 Identities=43% Similarity=0.826 Sum_probs=96.4
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|..||++|..|||+|..|+|.||++|||||+++|.|||+||||||+ +|++
T Consensus 376 E~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~--~p~~ 453 (677)
T cd01383 376 ESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEEST--FPNA 453 (677)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPD 101 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~ 101 (124)
||.+ +||++++++|+.|.+++
T Consensus 454 tD~~f~~kl~~~~~~~~~~~~~~ 476 (677)
T cd01383 454 TDLTFANKLKQHLKTNSCFRGER 476 (677)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999 99999999999998775
No 5
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=99.97 E-value=4.9e-32 Score=233.50 Aligned_cols=101 Identities=42% Similarity=0.699 Sum_probs=98.0
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|+.||++|..|||+|+.|+|.||++|||||+++|.|||++|||||+ +|++
T Consensus 378 E~f~~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~--~p~~ 455 (674)
T cd01384 378 ESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACM--FPKS 455 (674)
T ss_pred cccCcCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
||++ +||++.+++|+.|.+|+..
T Consensus 456 td~~f~~kl~~~~~~~~~~~~~~~~ 480 (674)
T cd01384 456 THETFAQKLYQTFKDHKRFEKPKLS 480 (674)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 9999 9999999999999998753
No 6
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=99.97 E-value=5.7e-32 Score=233.67 Aligned_cols=101 Identities=48% Similarity=0.894 Sum_probs=97.4
Q ss_pred CCCCC-CchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCC
Q psy4822 1 MYYKL-RGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNN 79 (124)
Q Consensus 1 e~f~~-NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~ 79 (124)
|+|+. |||||||||||||+||++|++++|+.+|++|..|||+|..|+|.||++|||||+++|.|||++|||||+ +|+
T Consensus 387 E~f~~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~--~p~ 464 (692)
T cd01385 387 EDFGRCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESN--FPH 464 (692)
T ss_pred ccCCCCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhc--CCC
Confidence 78888 999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCch--hhHHHHcCCCccccCCCCC
Q psy4822 80 AQNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 80 ~td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
+||++ +||++.|++|++|.+|+..
T Consensus 465 ~td~~~l~kl~~~~~~~~~~~~~~~~ 490 (692)
T cd01385 465 ATSQTLLAKFNQQHKDNKYYEGPQVK 490 (692)
T ss_pred CCHHHHHHHHHHHhCCCCCccCCCCC
Confidence 99999 9999999999999988643
No 7
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=99.97 E-value=1.5e-31 Score=231.71 Aligned_cols=101 Identities=33% Similarity=0.634 Sum_probs=97.1
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|..++++|..|||+|..|+|.||++|||||+++|.|||++|||||+ +|++
T Consensus 408 E~f~~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~--~p~~ 485 (717)
T cd01382 408 EYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENR--LPQP 485 (717)
T ss_pred ccCCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
||++ +||++.+++|+.|..|+.+
T Consensus 486 tD~~f~~kl~~~~~~~~~~~~~~~~ 510 (717)
T cd01382 486 SDQHFTSVVHQKHKDHFRLTIPRKS 510 (717)
T ss_pred CHHHHHHHHHHHhcCCcCccCCCcc
Confidence 9999 9999999999988877643
No 8
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=99.97 E-value=4.4e-31 Score=227.70 Aligned_cols=100 Identities=32% Similarity=0.621 Sum_probs=95.7
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhc-CcCCccccchhhhhcCCC-
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQANVGFN- 78 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~-kp~Gll~lLDeec~~~~p- 78 (124)
|+|+.|||||||||||||+||++|++++|+.++++|..|||+|..|+|.||++|||||++ +|.|||++|||||+ +|
T Consensus 377 E~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~--~p~ 454 (674)
T cd01378 377 EIFQKNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCA--TPH 454 (674)
T ss_pred cccccccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHc--CCC
Confidence 789999999999999999999999999999999999999999999999999999999999 89999999999999 99
Q ss_pred CCCCch--hhHHHHcCCCccccCCCC
Q psy4822 79 NAQNEK--SPFTLEMGNTECIHDPDP 102 (124)
Q Consensus 79 ~~td~~--~kl~~~~~~~~~f~~p~~ 102 (124)
++||++ +||++.+++|+.+.+|+.
T Consensus 455 ~~tD~~~~~kl~~~~~~~~~~~~~~~ 480 (674)
T cd01378 455 EGTDQTFLEKLNKKFSSHPHSDHFSS 480 (674)
T ss_pred CCChHHHHHHHHHHhccCCCCCCCCC
Confidence 999999 999999999998766554
No 9
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=99.97 E-value=6.1e-31 Score=227.30 Aligned_cols=100 Identities=41% Similarity=0.733 Sum_probs=95.8
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|+|||||||||||+||++|++++|+.||++|..|||+|+.|+|.||++|||||++ |.|||+||||||+ +|++
T Consensus 379 E~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee~~--~p~~ 455 (691)
T cd01380 379 ETFEKNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEECR--LPKG 455 (691)
T ss_pred cccCCCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHhhc--CCCC
Confidence 789999999999999999999999999999999999999999999999999999999996 5899999999999 9999
Q ss_pred CCch--hhHHHHcC--CCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMG--NTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~--~~~~f~~p~~~ 103 (124)
||++ +||++.|+ +|+.|.+|+..
T Consensus 456 td~~f~~kl~~~~~~~~~~~~~~~~~~ 482 (691)
T cd01380 456 SDESWAQKLYNKLPKKKNPHFEKPRFG 482 (691)
T ss_pred ChHHHHHHHHHHhcccCCCCccCCCCC
Confidence 9999 99999998 89999988753
No 10
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=99.97 E-value=1.1e-30 Score=224.59 Aligned_cols=99 Identities=41% Similarity=0.743 Sum_probs=93.4
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|||||||||||||+||++|++++|..|+++|..|||+|..|+|.||++|||||+++|.|||+||||||+ +|++
T Consensus 384 E~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~--~~~~ 461 (653)
T cd01379 384 ENFKKNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESR--FPQA 461 (653)
T ss_pred ccCCCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDP 102 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~ 102 (124)
||++ +|+++.+++ +.|.+|+.
T Consensus 462 td~~~~~kl~~~~~~-~~~~~~~~ 484 (653)
T cd01379 462 TDQTLVEKFEDNLKS-KFFWRPKR 484 (653)
T ss_pred CHHHHHHHHHHhcCC-CCccCCCC
Confidence 9999 999988864 56766654
No 11
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=99.97 E-value=1.1e-30 Score=225.35 Aligned_cols=99 Identities=44% Similarity=0.852 Sum_probs=96.7
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|+.|+|||||||||||+||++|++++|..++++|..|||+|+.|+|.||++|||||+++|.|||++|||||+ +|++
T Consensus 380 E~f~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~--~~~~ 457 (677)
T smart00242 380 EIFEVNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECR--FPKA 457 (677)
T ss_pred cccccCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhc--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPD 101 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~ 101 (124)
||++ +||++.+++|+.|.+|+
T Consensus 458 td~~~~~kl~~~~~~~~~~~~~~ 480 (677)
T smart00242 458 TDQTFLEKLNQTHEKHPHFSKPR 480 (677)
T ss_pred CHHHHHHHHHHHhcCCCCccCCC
Confidence 9999 99999999999999984
No 12
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=99.96 E-value=1.6e-30 Score=224.68 Aligned_cols=95 Identities=39% Similarity=0.724 Sum_probs=92.5
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeeccc-CCchhhhHhhhcCcCCccccchhhhhcCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQANVGFNN 79 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~-~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~ 79 (124)
|+|+.|||||||||||||+||++|++++|+.|+++|..|||+|+.|+| .||++|||||+++|.|||++|||||+ +|+
T Consensus 385 E~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~--~~~ 462 (693)
T cd01377 385 EIFDFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECV--FPK 462 (693)
T ss_pred cccCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhc--CCC
Confidence 789999999999999999999999999999999999999999999999 59999999999999999999999999 999
Q ss_pred CCCch--hhHHHHcCCCccc
Q psy4822 80 AQNEK--SPFTLEMGNTECI 97 (124)
Q Consensus 80 ~td~~--~kl~~~~~~~~~f 97 (124)
+||++ +||++.|++|+.|
T Consensus 463 ~tD~~~~~kl~~~~~~~~~~ 482 (693)
T cd01377 463 ATDKTFVEKLYDNHLGKSKF 482 (693)
T ss_pred CCHHHHHHHHHHHhcCCCcc
Confidence 99999 9999999999987
No 13
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=99.96 E-value=1.4e-30 Score=233.32 Aligned_cols=101 Identities=42% Similarity=0.777 Sum_probs=93.0
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhc-CcCCccccchhhhhcCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQANVGFNN 79 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~-kp~Gll~lLDeec~~~~p~ 79 (124)
|-|+.|||||||||||||+|||+|++|+|+.||++|..|||.|.+|+|.||++|||||++ .|.|||++|||||. .|.
T Consensus 439 EiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~--~p~ 516 (1463)
T COG5022 439 EIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECV--MPH 516 (1463)
T ss_pred hhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhc--CCC
Confidence 679999999999999999999999999999999999999999999999999999999997 37899999999999 999
Q ss_pred CCCch--hhHHHHcC--CCccccCCCCC
Q psy4822 80 AQNEK--SPFTLEMG--NTECIHDPDPR 103 (124)
Q Consensus 80 ~td~~--~kl~~~~~--~~~~f~~p~~~ 103 (124)
+||++ .||.+.+. .++.|.+|+-+
T Consensus 517 atd~s~~sKL~~~l~~~~~~~f~~~rf~ 544 (1463)
T COG5022 517 ATDESFTSKLAQRLNKNSNPKFKKSRFR 544 (1463)
T ss_pred CCchHHHHHHHHHhccccCccccccccC
Confidence 99999 99988875 45677766544
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=99.96 E-value=1e-29 Score=219.34 Aligned_cols=99 Identities=43% Similarity=0.806 Sum_probs=94.9
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|.|+.|+|||||||||||+||++|++++|..++++|..|||.|..|+|.||++|||||+++|.|||++|||||+ +|++
T Consensus 373 E~f~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~--~~~~ 450 (679)
T cd00124 373 EIFEKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECL--FPKG 450 (679)
T ss_pred ccCCCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhC--CCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPD 101 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~ 101 (124)
+|++ ++|++.|++|+.|..++
T Consensus 451 ~d~~~~~kl~~~~~~~~~~~~~~ 473 (679)
T cd00124 451 TDETFLEKLNNKLKSNNAFYPAK 473 (679)
T ss_pred CHHHHHHHHHHHhcCCcccccCC
Confidence 9999 99999999999875443
No 15
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=99.95 E-value=6e-29 Score=216.71 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=90.1
Q ss_pred CCCC------CCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeeccc-CCchhhhHhhhcCc-----------
Q psy4822 1 MYYK------LRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP----------- 62 (124)
Q Consensus 1 e~f~------~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~-~dn~~~ldLi~~kp----------- 62 (124)
|.|+ .|+|||||||||||+||++|++++|+.||++|..|||+|+.+.+ .||.+||+||+++|
T Consensus 384 E~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~ 463 (767)
T cd01386 384 QNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRA 463 (767)
T ss_pred cccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccccccccchhhc
Confidence 5676 48999999999999999999999999999999999999987655 79999999999865
Q ss_pred ---CCccccchhhhhcCCCCCCCch--hhHHHHcCCCccccCC
Q psy4822 63 ---NGLLCVLDDQANVGFNNAQNEK--SPFTLEMGNTECIHDP 100 (124)
Q Consensus 63 ---~Gll~lLDeec~~~~p~~td~~--~kl~~~~~~~~~f~~p 100 (124)
.|||+||||||+ +|++||++ +||++.+++|+.|.++
T Consensus 464 ~~~~GIl~lLDEec~--~p~~tD~~f~~kl~~~~~~~~~~~~~ 504 (767)
T cd01386 464 EDARGLLWLLDEEAL--VPGSSDDTFLERLFAAYGDRETRETG 504 (767)
T ss_pred cCCCchhhhhhHhhc--CCCCcHHHHHHHHHHHhccCCCcccC
Confidence 599999999999 99999999 9999999999988763
No 16
>KOG0164|consensus
Probab=99.95 E-value=1e-28 Score=210.65 Aligned_cols=101 Identities=33% Similarity=0.595 Sum_probs=95.7
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCC-
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNN- 79 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~- 79 (124)
|.|+.|||||||||||||+|||.|++.+++.||+||..|||.|.+|+|.+|..++||++.+..|||+||||||+ .|+
T Consensus 386 eif~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl--~~G~ 463 (1001)
T KOG0164|consen 386 EIFQDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACL--RPGT 463 (1001)
T ss_pred EeecCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhc--CCCc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999 876
Q ss_pred CCCch--hhHHHHcCCCccccCCCCC
Q psy4822 80 AQNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 80 ~td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
.||.+ ++|++.++.|++|..-+..
T Consensus 464 vtD~tfL~~l~~~~~~H~Hy~sr~~~ 489 (1001)
T KOG0164|consen 464 VTDETFLEKLNQKLKKHPHYTSRKLK 489 (1001)
T ss_pred cchHHHHHHHHHHhhhCCcchhhhcc
Confidence 68888 9999999999999876554
No 17
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=99.95 E-value=2.2e-28 Score=210.82 Aligned_cols=99 Identities=44% Similarity=0.846 Sum_probs=90.4
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeeccc-CCchhhhHhhhcCcCCccccchhhhhcCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQANVGFNN 79 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~-~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~ 79 (124)
|+|..|+|||||||||||+||++|++++|..++++|..|||.|+.++| .||.+|||||+++|.|||+||||||+ +|+
T Consensus 375 E~~~~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~--~~~ 452 (689)
T PF00063_consen 375 ENFSVNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECL--LPR 452 (689)
T ss_dssp ---SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCT--STT
T ss_pred ccccccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhhhhh--ccc
Confidence 678999999999999999999999999999999999999999999999 99999999999999999999999999 999
Q ss_pred CCCch--hhHHHHc-CCCccccCCC
Q psy4822 80 AQNEK--SPFTLEM-GNTECIHDPD 101 (124)
Q Consensus 80 ~td~~--~kl~~~~-~~~~~f~~p~ 101 (124)
++|++ +++...+ ++|+.|.+|+
T Consensus 453 ~sd~~fl~kl~~~~~~~~~~~~~~~ 477 (689)
T PF00063_consen 453 GSDESFLEKLLKRHSGKHPSFVKPR 477 (689)
T ss_dssp S-HHHHHHHHHHHHTTTSTTEECTS
T ss_pred chhhHHHHHHHhhcccCCCcccccc
Confidence 99999 9999999 9999998874
No 18
>KOG0161|consensus
Probab=99.94 E-value=1.7e-27 Score=219.70 Aligned_cols=98 Identities=40% Similarity=0.768 Sum_probs=94.5
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeeccc-CCchhhhHhhhcCcCCccccchhhhhcCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQANVGFNN 79 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~-~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~ 79 (124)
|.|+.||||||||||+||+||++|++++|..+|++|..|||.|..|+| .|-++|++||+ +|.||+++|||||. +|+
T Consensus 459 EIfe~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~Gi~slLdEEc~--~Pk 535 (1930)
T KOG0161|consen 459 EIFEFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMGILSLLDEECV--VPK 535 (1930)
T ss_pred cccCcCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhhHHHHHHHHHh--cCC
Confidence 578999999999999999999999999999999999999999999999 89999999999 57799999999999 999
Q ss_pred CCCch--hhHHHHc-CCCccccCCC
Q psy4822 80 AQNEK--SPFTLEM-GNTECIHDPD 101 (124)
Q Consensus 80 ~td~~--~kl~~~~-~~~~~f~~p~ 101 (124)
+||.+ +||...| ++|+.|.+|+
T Consensus 536 Atd~tf~~kL~~~~~gk~~~f~~~k 560 (1930)
T KOG0161|consen 536 ATDKTFLEKLCDQHLGKHPKFQKPK 560 (1930)
T ss_pred CccchHHHHHHHHhhccCccccCcc
Confidence 99999 9999988 9999999996
No 19
>KOG0163|consensus
Probab=99.93 E-value=2.8e-26 Score=196.79 Aligned_cols=102 Identities=36% Similarity=0.653 Sum_probs=97.3
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|||.+|||||||||||||+||++|++.+++.||+.|..||+.++.|.|.||++||+||+.|..|||.|||||.+ +|+.
T Consensus 462 Eyf~~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEak--lP~~ 539 (1259)
T KOG0163|consen 462 EYFAVNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAK--LPKP 539 (1259)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhcc--CCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCCc
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPRI 104 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~~ 104 (124)
+++. ...++.+++|-....|+.+.
T Consensus 540 s~qhFT~~vHe~~k~HfRL~~PRkSk 565 (1259)
T KOG0163|consen 540 SYQHFTARVHESNKNHFRLDLPRKSK 565 (1259)
T ss_pred chHHHHHHHHHhhhcceeecCCchhh
Confidence 9887 88999999998888886654
No 20
>KOG0160|consensus
Probab=99.91 E-value=4.4e-25 Score=192.77 Aligned_cols=100 Identities=43% Similarity=0.760 Sum_probs=97.3
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|.|+.|+|||||||||||+||+.|++|+|+.+|++|..|+|+|..|+|.||++|+++|+. |.|+++||||+|. +|.+
T Consensus 379 EsF~~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~--lp~~ 455 (862)
T KOG0160|consen 379 ESFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECM--LPKG 455 (862)
T ss_pred cccccCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccchhcc--CCCC
Confidence 679999999999999999999999999999999999999999999999999999999997 8999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
+|++ .||...+.+|+.|.+|+.+
T Consensus 456 t~~~~a~KL~~~~~~~~~f~kpr~~ 480 (862)
T KOG0160|consen 456 TDETLAQKLYQTLKRNKRFTKPRLS 480 (862)
T ss_pred CcchHHHHHHHHhccCCccCCCCCC
Confidence 9999 9999999999999999887
No 21
>KOG0162|consensus
Probab=99.91 E-value=7.3e-25 Score=187.59 Aligned_cols=108 Identities=31% Similarity=0.577 Sum_probs=95.9
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcC-cCCccccchhhhhc--CC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGK-PNGLLCVLDDQANV--GF 77 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~k-p~Gll~lLDeec~~--~~ 77 (124)
|-|+.||||||||||.||+||+.|++.+++.||++|..|||.|++|.|.||.-++|||+.| |.||+++|||.|.. .-
T Consensus 394 EIFe~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~Ha~ 473 (1106)
T KOG0162|consen 394 EIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATAHAD 473 (1106)
T ss_pred eecccCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHhccc
Confidence 6799999999999999999999999999999999999999999999999999999999984 78999999999992 12
Q ss_pred CCCCCch--hhHHHHcCCCccccCCCCCccccc
Q psy4822 78 NNAQNEK--SPFTLEMGNTECIHDPDPRIRIER 108 (124)
Q Consensus 78 p~~td~~--~kl~~~~~~~~~f~~p~~~~~~~~ 108 (124)
..+-|++ ++|+..+++|++|..-....-|++
T Consensus 474 ~~~aDqa~~qrLn~~~~s~phF~~~s~~FvIkH 506 (1106)
T KOG0162|consen 474 SEGADQALLQRLNKLFGSHPHFESRSNGFVIKH 506 (1106)
T ss_pred cchhHHHHHHHHHHHhcCCCccccccCceEEEE
Confidence 2344666 899999999999988777766654
No 22
>KOG4229|consensus
Probab=99.86 E-value=1.5e-22 Score=180.18 Aligned_cols=101 Identities=45% Similarity=0.824 Sum_probs=96.9
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHHhHHHHHHhhhhCCeeeecccCCchhhhHhhhcCcCCccccchhhhhcCCCCC
Q psy4822 1 MYYKLRGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQANVGFNNA 80 (124)
Q Consensus 1 e~f~~NsfeQl~iN~anE~Lq~~~~~~~f~~e~~ey~~Egi~~~~i~~~dn~~~ldLi~~kp~Gll~lLDeec~~~~p~~ 80 (124)
|+|..|+|||+|||+|||+||.+|++++|..|+++|..|+|+|..|.|.||..|++||..+|.|||.+||||+. +|++
T Consensus 438 E~f~~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~--fP~~ 515 (1062)
T KOG4229|consen 438 ENFERNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESR--FPKA 515 (1062)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheecccCc--CCch
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCch--hhHHHHcCCCccccCCCCC
Q psy4822 81 QNEK--SPFTLEMGNTECIHDPDPR 103 (124)
Q Consensus 81 td~~--~kl~~~~~~~~~f~~p~~~ 103 (124)
||++ .|++.+|+.+..|..|+..
T Consensus 516 td~tl~~k~~~q~~~~~~y~~~k~~ 540 (1062)
T KOG4229|consen 516 TDQTLLLKLNMQHGSNNLYVFPKSR 540 (1062)
T ss_pred HHHHHHHHhhhhhhccccccccccc
Confidence 9999 9999999998888877664
Done!