BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4829
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FT54|GTE6_ARATH Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1
Length = 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y E + PM F ++ ++ GYK ++Q +D+RL+F+NA Y +T YS AK L
Sbjct: 128 YFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKL 187
Query: 83 EEYFEHMLEKWLP 95
E FE +LP
Sbjct: 188 LEKFEEKWAHFLP 200
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ +K P++ +++R ++N YK +FI DI L+F N F Y + E L
Sbjct: 1466 YYDIIKKPIALNIIREKVNKCE---YKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRL 1522
Query: 83 EEYFEHMLEKWLPDYAYDDSLDGELSEPSAKRLR 116
+ +F H+ + L + ++D + P+AK+ R
Sbjct: 1523 QAFF-HIQAQKLGLHVTPSNVDQVSTPPAAKKSR 1555
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNA--FVYYAKTDQEYSDAK 80
Y++ +K PM V+ +L H + Y+T F++D+RLIFKN F K Q Y+D +
Sbjct: 956 YYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQAYADTQ 1015
Query: 81 --NLEE-------------YFEHMLEKWLPDYAY 99
NL+ YFE L PD +
Sbjct: 1016 EINLQNDSEVAQAGKAVVLYFEEKLPAIYPDRTF 1049
>sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana
GN=GTE3 PE=1 SV=1
Length = 461
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH +K PM V+ RL+ S YK+ ++F D+RL F NA +Y Y A+ L
Sbjct: 153 YHNIIKEPMDLGTVKTRLSKSL---YKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEIL 209
Query: 83 EEYFEHMLEKWLP 95
FE EKW+P
Sbjct: 210 LNLFE---EKWVP 219
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2 SV=1
Length = 1163
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVY-------------- 68
Y++ +K+PM +V+ +L HP YK+ +F+SD+RL+F N Y
Sbjct: 1027 YYKIIKHPMDLTLVKRKLQRKHPLHYKSPKEFVSDVRLVFSNCAKYNEMSRIIQVYDEEK 1086
Query: 69 --YAKTDQEYSDA-KNLEEYFEHMLEKWLPDYAYDDSLDGE 106
+ D E ++A K + YFE L + P+ + ++ E
Sbjct: 1087 QSNVQADSEVAEAGKAVSLYFEERLLEIFPEQTFPVVMEKE 1127
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 21 KGYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDA- 79
+ Y++ +K PM ++R +L P Y T + +SD+RL+F N + D E ++A
Sbjct: 1101 RHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNC-AKFNYPDSEVAEAG 1159
Query: 80 KNLEEYFEHMLEKWLPDYAY 99
+ LE +FE L++ PD +
Sbjct: 1160 RCLEVFFEGWLKEIYPDKCF 1179
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 34/127 (26%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNA--FVYYAKTDQEYSD-- 78
Y++ +K PM V+ +L H + Y+ F++D+RLIFKN F K Q Y+D
Sbjct: 1008 YYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEMMKVVQVYADTQ 1067
Query: 79 -------------AKNLEEYFEHMLEKW--------LPDYAYDDSLDGELSE-------- 109
K + YFE L + LP++ D+ DGE++E
Sbjct: 1068 EINLKGDSEVAKAGKAVALYFEDKLSEIYSDRTFTPLPEFEQDED-DGEVTEDSDEDFIQ 1126
Query: 110 PSAKRLR 116
P KRL+
Sbjct: 1127 PRRKRLK 1133
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + VKNPM ++ +L+ Y+ Q++ D+ L+F NA++Y KT + Y L
Sbjct: 1125 YFDIVKNPMDLSTIKRKLDTGQ---YQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1181
Query: 83 EEYFEHMLEKWLPDYAY 99
E FE ++ + Y
Sbjct: 1182 AEVFEQEIDPVMQSLGY 1198
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + VKNPM ++ +L+ Y+ Q++ D+ L+F NA++Y KT + Y L
Sbjct: 1126 YFDIVKNPMDLSTIKRKLDTGQ---YQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1182
Query: 83 EEYFEHMLEKWLPDYAY 99
E FE ++ + Y
Sbjct: 1183 AEVFEQEIDPVMQSLGY 1199
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + VKNPM ++ +L+ Y+ Q++ D+ L+F NA++Y KT + Y L
Sbjct: 1126 YFDIVKNPMDLSTIKRKLDTGQ---YQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1182
Query: 83 EEYFEHMLEKWLPDYAY 99
E FE ++ + Y
Sbjct: 1183 AEVFEQEIDPVMQSLGY 1199
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + +K+PM ++ +L+ + GY TI F +D+RL+F+NA Y A + + AK L
Sbjct: 555 YFDVIKHPMDLGTIKGKLDNN---GYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTL 611
Query: 83 EEYFEHMLEKWLPD 96
F+ + P+
Sbjct: 612 LNAFDQKFLQNFPN 625
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y+E +K PM + RL + YKT+ +F+ D RL+F N Y +T Y +A L
Sbjct: 389 YYEVIKEPMDLSTMEQRL---EADSYKTMEEFVYDARLVFNNCRAYNNETTTYYKNANKL 445
Query: 83 EEYFEHMLEKWLPDYAY 99
E++ + K +P+Y++
Sbjct: 446 EKFMVAKI-KEIPEYSH 461
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + VK+PM ++ +L+ Y+ Q+I DI L+F NA++Y KT + Y L
Sbjct: 1088 YFDIVKSPMDLSTIKRKLDTGQ---YQEPWQYIDDIWLMFNNAWLYNRKTSRVYKYCSKL 1144
Query: 83 EEYFEHMLEKWLPDYAY 99
E FE ++ + Y
Sbjct: 1145 SEVFEQEIDPVMQSLGY 1161
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ +K P++ +++R ++N YK +FI DI L+F N F Y + E L
Sbjct: 1465 YYDIIKKPIALNIIREKVNKCE---YKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRL 1521
Query: 83 EEYFEHMLEKWLPDYAYDDSLDGELSEPSAKRLRR 117
+ +F H+ + L + ++D ++S P A + R
Sbjct: 1522 QAFF-HIQAQKLGLHVSPSTVD-QVSTPLAAKKSR 1554
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 34/127 (26%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNA--FVYYAKTDQEYSDAK 80
Y++ +K PM V+ +L H + Y+ F++D+RLIFKN F K Q Y+D +
Sbjct: 993 YYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEMMKVVQVYADTQ 1052
Query: 81 --NLEE-------------YFEHMLEKW--------LPDYAYDDSLDGELSE-------- 109
NL+ YFE L + LP++ ++ DGE++E
Sbjct: 1053 EINLKADSEVAQAGKAVALYFEDKLTEIYSDRTFAPLPEFEQEED-DGEVTEDSDEDFIQ 1111
Query: 110 PSAKRLR 116
P KRL+
Sbjct: 1112 PRRKRLK 1118
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 22 GYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKN 81
Y++ VKNPM ++ +++ + YK +F +D+RL+F N + Y + + A+
Sbjct: 307 NYYDIVKNPMDLGTIKGKMDK---QEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARM 363
Query: 82 LEEYFEHMLEKWLPDYAYDDSLDGELSEPSAKRL 115
L++ FE K +PD + L+ SAK L
Sbjct: 364 LQDVFEMHFAK-IPDEPVESMRACHLTTNSAKAL 396
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 21 KGYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDA- 79
+ Y++ +K PM ++R +L P Y T + +SD+RL+F N + D E ++A
Sbjct: 1075 RHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNC-AKFNYPDSEVAEAG 1133
Query: 80 KNLEEYFEHMLEKWLPD 96
+ LE +FE L++ P+
Sbjct: 1134 RCLEVFFEGWLKEIYPE 1150
>sp|Q02206|RSC4_YEAST Chromatin structure-remodeling complex subunit RSC4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC4 PE=1 SV=2
Length = 625
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y+E V +PM+ +V+ L Y I FI D+ L+F+NA ++ + Y DA L
Sbjct: 225 YYEIVHSPMALSIVKQNLEIGQ---YSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTL 281
Query: 83 EEYFEHMLEK 92
YF ++++K
Sbjct: 282 TNYFNYLIQK 291
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + VK+PM ++ +L+ Y+ Q++ DI L+F NA++Y KT + Y L
Sbjct: 1089 YFDIVKSPMDLSTIKRKLDTGQ---YQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKL 1145
Query: 83 EEYFEHMLEKWLPDYAY 99
E FE ++ + Y
Sbjct: 1146 SEVFEQEIDPVMQSLGY 1162
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 18 CSDKGYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYS 77
C Y + +K PM ++ +LN + Y T+ +F SDI L+F N F Y +
Sbjct: 288 CDCPDYFDVIKEPMDLSTIQSKLNKNE---YSTLEEFESDILLMFNNCFTYNPPGTPVHV 344
Query: 78 DAKNLEEYFEHMLEKWLPDYAYDDS 102
+ LE F+ EKW +DD+
Sbjct: 345 MGRQLENVFK---EKWEARPKFDDA 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y VKNPM + +L Y +FI D+ L+F N F+Y S K L
Sbjct: 123 YPTIVKNPMDLGTIEKKLTSYE---YSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKAL 179
Query: 83 EEYFEHMLEKWLPD 96
+E FE L K LPD
Sbjct: 180 QEVFERQL-KQLPD 192
>sp|Q7Y214|GTE7_ARATH Transcription factor GTE7 OS=Arabidopsis thaliana GN=GTE7 PE=2 SV=1
Length = 590
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ VK PM V+ L+ Y + + F +D+RL F NA Y K Y A L
Sbjct: 203 YHQVVKKPMDLGTVKLNLDKGF---YVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKL 259
Query: 83 EEYFEHMLEKWLPDY-AYDDSLDGELSEP 110
++F+ M + A L G S P
Sbjct: 260 LDHFDGMFNPAFKKFEAQQLKLTGSSSRP 288
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y +K+PM +R RL Y + + F +D+RL F N+ Y +Q ++ A+ +
Sbjct: 195 YFNVIKHPMDLGTIRSRLCKGE---YSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGI 251
Query: 83 EEYFEH---MLEKWLP 95
+YFE +EK +P
Sbjct: 252 SKYFESGWKSIEKKIP 267
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + V PM F ++ + + Y+T+ +F++D++L+F N +YY + S +
Sbjct: 1341 YTKVVTTPMDFQTMQSKCSCG---SYQTVQEFLNDLKLVFGNTELYYEAGSSQLSCLEKT 1397
Query: 83 EEYFEHMLEKWLPDYAY 99
E+ +L K LP + Y
Sbjct: 1398 EQCARDLLGKHLPAHTY 1414
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAK-N 81
Y++ +KNPM ++ RL + Y F++D RLIF+N + + D E ++A
Sbjct: 935 YYKIIKNPMDLSTIKKRLQEDY-SMYSKPEDFVADFRLIFQNC-AEFNEPDSEVANAGIK 992
Query: 82 LEEYFEHMLEKWLPD 96
LE YFE +L+ P+
Sbjct: 993 LENYFEELLKNLYPE 1007
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 14/76 (18%)
Query: 22 GYHEKVKNPM-----SFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEY 76
Y + VKNPM S +++ W+ YKTI QF+ D+ L+F N F + + ++ +
Sbjct: 358 NYFDVVKNPMDLGTISNNLMNWK--------YKTIDQFVDDLNLVFYNCFQFNPEGNEVH 409
Query: 77 SDAKNLEEYFE-HMLE 91
S K L+E F H LE
Sbjct: 410 SMGKKLKELFNFHWLE 425
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ ++ PM+ +V++ +L+ Y+TI QF+ D L+F NA + + Q Y DA L
Sbjct: 249 YYQAIEQPMALEVIQKKLSKHR---YETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFL 305
Query: 83 EEYFEHML 90
+ Y +L
Sbjct: 306 KNYLADVL 313
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ +++PM F ++ N Y+++ +F++D++ +F NA +Y + S +
Sbjct: 1372 YYDVIEHPMDFQTIQ---NKCSCGNYRSVQEFLTDMKQVFANAELYNCRGSHVLSCMEKT 1428
Query: 83 EEYFEHMLEKWLPDYAY 99
E+ +L+K LP + Y
Sbjct: 1429 EQCLLALLQKHLPGHPY 1445
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYA-KTDQEYSDAKN 81
Y + + PM F VR L + Y + V+F DIRLIF NA Y K + YS
Sbjct: 1352 YRDIIDTPMDFGTVRETLEAGN---YDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLR 1408
Query: 82 LEEYFEHMLEKWLPDYAYDDSLDGELSEPSAKRLRRGQ 119
L FE ++K S D ++ + ++LRR Q
Sbjct: 1409 LSALFEEKMKKI--------SFDFKIGQKFKEKLRRSQ 1438
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAK-N 81
Y++ +KNPM ++ RL + Y F++D RLIF+N + + D E ++A
Sbjct: 936 YYKIIKNPMDLSTIKKRLQEDY-CMYTKPEDFVADFRLIFQNC-AEFNEPDSEVANAGIK 993
Query: 82 LEEYFEHMLEKWLPD 96
LE YFE +L+ P+
Sbjct: 994 LESYFEELLKNLYPE 1008
>sp|Q84XV2|GTE1_ARATH Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1
Length = 386
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ ++ PM ++ ++ S Y + + +D+RL+FKNA Y + + Y A++L
Sbjct: 144 YYKVIEKPMDLGTIKKKMESSE---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESL 200
Query: 83 EEYFEHMLEKWL 94
E FE EKWL
Sbjct: 201 LEKFE---EKWL 209
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 22 GYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKN 81
Y++ VKNPM ++ +++ + YK +F +D+RL+F N + Y + + A+
Sbjct: 307 NYYDVVKNPMDLGTIKGKMDN---QEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMART 363
Query: 82 LEEYFEHMLEKWLPDYAYDDSLDGELSEPSAKRL 115
L++ FE K +PD + L+ SA+ L
Sbjct: 364 LQDVFELHFAK-IPDEPIESMHACHLTTNSAQAL 396
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 7 YHQELRLMRRKCSDKGYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAF 66
+ Q + ++ K D Y+ +K PM + ++ RL + Y+ + I D +F N +
Sbjct: 51 FQQPVDAVKLKLPD--YYTIIKTPMDLNTIKKRLENKY---YEKASECIEDFNTMFSNCY 105
Query: 67 VYYAKTDQEYSDAKNLEEYFEHMLEKW 93
+Y D A+ LE+ F L +
Sbjct: 106 LYNKTGDDIVVMAQALEKLFMQKLSQM 132
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYA-KTDQEYSDAKN 81
Y + + PM F VR L+ + Y + ++F DIRLIF NA Y K + YS
Sbjct: 1350 YRDIIDTPMDFGTVRETLDAGN---YDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLR 1406
Query: 82 LEEYFEHMLEKWLPDY 97
L FE ++K D+
Sbjct: 1407 LSALFEEKMKKISSDF 1422
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YHE + PM ++ ++ Y +QF +D+RL+F N + Y + S A+ L
Sbjct: 309 YHEIIHQPMDMSTIKKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKL 365
Query: 83 EEYFEHMLEKWLPD 96
++ FE K +PD
Sbjct: 366 QDVFEFRFSK-IPD 378
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y+ +KNPM +R RL ++ Y ++ + D +F N +VY D A+ L
Sbjct: 68 YYTIIKNPMDLTTIRKRLENNY---YWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVL 124
Query: 83 EEYFEHMLEKW--LPDYAYDDS 102
E+ F LEK +P+ Y+ S
Sbjct: 125 EKLF---LEKVAEMPEEEYEIS 143
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + + +PM ++ + S Y + FI D++LIF NA Y + +
Sbjct: 1403 YQDVITSPMDLTTMQGKFKSSE---YHSASDFIEDMKLIFSNAEEYNQPSSNVLTCMSRT 1459
Query: 83 EEYFEHMLEKWLPDYAY 99
EE F +L+K LP +Y
Sbjct: 1460 EEAFVELLQKSLPGVSY 1476
>sp|Q8H1D7|GTE5_ARATH Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana
GN=GTE5 PE=1 SV=1
Length = 487
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH VK PM V+ +L S YK+ + F D+RL F NA +Y Y A+ L
Sbjct: 166 YHNIVKEPMDLGTVKTKLGKSL---YKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELL 222
Query: 83 EEYFEHMLEKWL 94
FE +KW+
Sbjct: 223 LNMFE---DKWV 231
>sp|Q6CXW4|GCN5_KLULA Histone acetyltransferase GCN5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GCN5 PE=3 SV=1
Length = 516
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y+E +K PM + +LN + Y+ + FI D RLIF N Y + + A L
Sbjct: 441 YYEFIKEPMDLSSMEMKLNGNR---YEKMENFIYDARLIFNNCRAYNGENTSYFKYANRL 497
Query: 83 EEYFEHMLEKWLPDYAY 99
E++F + K +P+Y++
Sbjct: 498 EKFFNSKV-KEIPEYSH 513
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +K PM V+ +++ YK+ +F +D+RLIF N + Y + + L
Sbjct: 517 YHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKL 573
Query: 83 EEYFEHMLEKWLPD 96
++ FE M +PD
Sbjct: 574 QDVFE-MRYANIPD 586
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +K PM ++ RL ++ Y + + I D +F N +VY + A+ L
Sbjct: 73 YHKIIKQPMDMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTL 129
Query: 83 EEYFEHMLE 91
E+ F +E
Sbjct: 130 EKVFLQKIE 138
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYY-AKTDQEYSDAKN 81
Y + + PM F VR L + Y++ ++ D+RLIF N+ Y +K + YS +
Sbjct: 1353 YRDIIDTPMDFATVRETLEAGN---YESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLR 1409
Query: 82 LEEYFEHMLEKWLPDY 97
L +FE + L DY
Sbjct: 1410 LSAFFEEHISSVLSDY 1425
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 22 GYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKN 81
GY + VK PM ++ L+ +T+ QF+ D+ L+F+NA +Y Y A
Sbjct: 1139 GYKDVVKRPMDLTSLKRNLSKGR---IRTMAQFLRDLMLMFQNAVMYNDSDHHVYHMAVE 1195
Query: 82 L-EEYFEHM--LEKWLPDYAYDDSLDGELSEP 110
+ +E E + L WL SL+GE + P
Sbjct: 1196 MRQEVLEQIQVLNIWLDKRKGSSSLEGEPANP 1227
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 22 GYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKN 81
GYH V+ PM ++ + ++ +F DI L+F+NA +Y + Y A
Sbjct: 743 GYHSIVQRPMDLSTIKKNIENGL---IRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVE 799
Query: 82 LEEYFEHMLEKWL 94
++ ++++L
Sbjct: 800 MQRDVLEQIQQFL 812
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y +K+PM V+ +L Y + +F +D+RL F+NA Y + Y A L
Sbjct: 163 YFTIIKHPMDLGTVKSKLTSGT---YSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 219
Query: 83 EEYFE 87
++FE
Sbjct: 220 SKFFE 224
>sp|Q55C84|Y0170_DICDI Bromodomain-containing protein DDB_G0270170 OS=Dictyostelium
discoideum GN=DDB_G0270170 PE=4 SV=1
Length = 1578
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y + +K+PM ++ L GY TI +F D RL+F NA Y T+ + A++L
Sbjct: 774 YFDVIKHPMDLGTIKASLIGG---GYDTIDKFAEDCRLVFSNAKTYNPSTNPVHIMAQSL 830
Query: 83 EEYFEHMLEKWL 94
E+ FE K L
Sbjct: 831 EDVFEKGFPKVL 842
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YHE +K PM + V +L Y+ QF DI L+ NA++Y K + Y L
Sbjct: 903 YHEIIKRPMDLETVHKKLYAGQ---YQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKL 959
Query: 83 EEYFEHMLEKWLPDYAY 99
E F ++ + Y
Sbjct: 960 SEMFVSEMDPVMKSMGY 976
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 18 CSDKGYHEKVKNPMSFDVVRWRLNPSHPEG-YKTIVQFISDIRLIFKNAFVYYAKTDQEY 76
CSD +K+PM +R ++ G YK F SD+RL+F N++ Y ++
Sbjct: 318 CSDA-----IKHPMDLATIRDKME----NGLYKDTQDFASDVRLMFMNSYKYNPPDNEVV 368
Query: 77 SDAKNLEEYFEHMLEKWLPD 96
+ A+ +++ FE M K +PD
Sbjct: 369 NMARKMQDVFEGMFAK-IPD 387
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ +KNPM +R RL ++ Y + I D +F N ++Y D ++ L
Sbjct: 67 YYQIIKNPMDLSTIRKRLEYNY---YSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQEL 123
Query: 83 EEYF 86
E+ F
Sbjct: 124 EKVF 127
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +K+PM V+ +++ Y F +DIRL+F N + Y + + A+ L
Sbjct: 347 YHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKL 403
Query: 83 EEYFEHMLEKWLPD 96
++ FE K +PD
Sbjct: 404 QDVFEMRFAK-MPD 416
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +KNPM ++ RL ++ Y + + + D +F N ++Y TD A+ L
Sbjct: 72 YHKIIKNPMDMGTIKKRLENNY---YWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQAL 128
Query: 83 EEYF 86
E+ F
Sbjct: 129 EKIF 132
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 22 GYHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKN 81
GY + +K PM F +R +L+ Y + F D+RL+F N + N
Sbjct: 2096 GYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGRAGHN 2152
Query: 82 LEEYFEHMLEKW 93
+ +YFE +KW
Sbjct: 2153 MRKYFE---KKW 2161
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYY-AKTDQEYSDAKN 81
Y + + PM F VR L + Y++ ++ D+RLIF N Y +K + YS +
Sbjct: 1353 YRDIIDTPMDFATVRETLEAGN---YESPMELCKDVRLIFSNFKAYTPSKRSRIYSMSLR 1409
Query: 82 LEEYFEHMLEKWLPDY 97
L +FE + L DY
Sbjct: 1410 LSAFFEEHISSVLSDY 1425
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 2 KQLIQYHQELRLMRRK---------CSDK---GYHEKVKNPMSFDVVRWRLNPSHPEGYK 49
+QL+++ LRL++RK +D GY +K+PM F ++ ++ + YK
Sbjct: 172 QQLLEHF--LRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANE---YK 226
Query: 50 TIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNLEEYFEHMLEKWLPDYAYDD 101
TI +F +D +L+ NA VY Y AK L M+ K DD
Sbjct: 227 TITEFKADFKLMCDNAMVYNRPETVYYKAAKKLLHTGFKMMSKQAAILGDDD 278
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +K+PM V+ +++ Y F +D+RL+F N + Y + + A+ L
Sbjct: 348 YHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKL 404
Query: 83 EEYFEHMLEKWLPD 96
++ FE K +PD
Sbjct: 405 QDVFEMRFAK-MPD 417
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
YH+ +KNPM ++ RL ++ Y + + + D +F N ++Y TD A+ L
Sbjct: 73 YHKIIKNPMDMGTIKKRLENNY---YWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQAL 129
Query: 83 EEYF 86
E+ F
Sbjct: 130 EKIF 133
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y++ +K PM + +L + Y+ + FI D RL+F N +Y + Y A L
Sbjct: 364 YYDFIKEPMDLSTMEIKLESNK---YQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRL 420
Query: 83 EEYFEHMLEKWLPDYAY 99
E++F + + K +P+Y++
Sbjct: 421 EKFFNNKV-KEIPEYSH 436
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 23 YHEKVKNPMSFDVVRWRLNPSHPEGYKTIVQFISDIRLIFKNAFVYYAKTDQEYSDAKNL 82
Y+E +K PM + +L + Y+ + FI D RLIF N Y + + A L
Sbjct: 377 YYEFIKEPMDLSTMEIKLENNR---YEKMEDFIYDARLIFNNCRAYNGENTSYFKYANRL 433
Query: 83 EEYFEHMLEKWLPDYAY 99
E++F + K +P+Y++
Sbjct: 434 EKFFNTKM-KEIPEYSH 449
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,227,672
Number of Sequences: 539616
Number of extensions: 1808686
Number of successful extensions: 4581
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 4425
Number of HSP's gapped (non-prelim): 171
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)