Query psy4832
Match_columns 770
No_of_seqs 601 out of 2871
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 18:54:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hw6_A Hypothetical protein, I 100.0 6E-30 2.1E-34 285.7 34.6 286 149-529 107-431 (433)
2 3kya_A Putative phosphatase; s 100.0 8.9E-29 3E-33 275.8 32.1 316 149-532 103-476 (496)
3 3tc9_A Hypothetical hydrolase; 100.0 2.2E-28 7.6E-33 273.1 31.3 287 149-529 105-428 (430)
4 3hrp_A Uncharacterized protein 100.0 1.7E-27 5.8E-32 264.5 38.2 297 143-529 99-408 (409)
5 3fvz_A Peptidyl-glycine alpha- 99.9 1.7E-24 5.7E-29 233.1 31.1 266 174-530 18-321 (329)
6 3kya_A Putative phosphatase; s 99.9 5.8E-24 2E-28 237.0 31.9 283 126-470 136-483 (496)
7 4hw6_A Hypothetical protein, I 99.9 3.1E-24 1.1E-28 239.5 28.5 283 104-459 111-431 (433)
8 3s94_A LRP-6, low-density lipo 99.9 1.8E-23 6.2E-28 243.1 35.6 344 128-568 83-552 (619)
9 3tc9_A Hypothetical hydrolase; 99.9 1.3E-23 4.4E-28 234.5 28.8 269 121-460 129-429 (430)
10 3s94_A LRP-6, low-density lipo 99.9 6.5E-21 2.2E-25 221.7 51.8 304 176-568 36-424 (619)
11 4a0p_A LRP6, LRP-6, low-densit 99.9 1.2E-20 4.1E-25 219.6 49.1 191 177-456 34-235 (628)
12 4a0p_A LRP6, LRP-6, low-densit 99.9 7.1E-22 2.4E-26 229.9 38.3 353 128-571 79-553 (628)
13 1q7f_A NHL, brain tumor CG1071 99.9 2.1E-21 7.3E-26 203.7 36.0 243 176-529 26-278 (286)
14 2qc5_A Streptogramin B lactona 99.9 1.1E-20 3.9E-25 198.4 37.9 273 129-529 20-298 (300)
15 3hrp_A Uncharacterized protein 99.9 8.6E-21 2.9E-25 210.4 34.5 264 126-454 128-406 (409)
16 1rwi_B Serine/threonine-protei 99.9 5E-21 1.7E-25 198.6 28.8 235 181-533 25-266 (270)
17 2qc5_A Streptogramin B lactona 99.9 1E-19 3.5E-24 191.1 39.0 236 177-529 17-258 (300)
18 3v64_C Agrin; beta propeller, 99.9 3E-21 1E-25 209.4 27.1 229 183-530 37-274 (349)
19 3v65_B Low-density lipoprotein 99.9 6.8E-21 2.3E-25 209.6 27.3 229 183-530 80-317 (386)
20 3fvz_A Peptidyl-glycine alpha- 99.9 4.1E-21 1.4E-25 206.6 23.8 266 118-461 14-322 (329)
21 2z2n_A Virginiamycin B lyase; 99.9 4E-19 1.4E-23 186.4 38.5 274 129-530 15-294 (299)
22 2z2n_A Virginiamycin B lyase; 99.9 8.4E-19 2.9E-23 184.0 40.1 235 178-529 13-253 (299)
23 3p5b_L Low density lipoprotein 99.9 9.6E-21 3.3E-25 209.3 25.2 227 188-530 81-319 (400)
24 3v64_C Agrin; beta propeller, 99.9 3.4E-20 1.2E-24 201.1 26.7 196 177-462 70-277 (349)
25 3sov_A LRP-6, low-density lipo 99.9 2.6E-20 8.9E-25 199.1 23.6 223 189-530 3-237 (318)
26 1ijq_A LDL receptor, low-densi 99.9 7.3E-20 2.5E-24 195.8 27.0 220 192-530 3-237 (316)
27 3v65_B Low-density lipoprotein 99.9 7.1E-20 2.4E-24 201.5 26.3 195 177-462 113-320 (386)
28 1ijq_A LDL receptor, low-densi 99.8 1.7E-19 5.7E-24 193.0 27.3 196 178-462 28-240 (316)
29 3p5b_L Low density lipoprotein 99.8 1.6E-19 5.4E-24 199.5 27.8 197 177-462 109-322 (400)
30 3m0c_C LDL receptor, low-densi 99.8 1.1E-19 3.7E-24 215.6 26.8 235 185-530 390-631 (791)
31 1q7f_A NHL, brain tumor CG1071 99.8 5.4E-19 1.8E-23 185.3 29.0 237 127-451 28-273 (286)
32 3sov_A LRP-6, low-density lipo 99.8 1.2E-19 4.2E-24 193.9 23.2 196 177-462 32-240 (318)
33 1npe_A Nidogen, entactin; glyc 99.8 3.2E-19 1.1E-23 185.6 25.6 220 192-530 3-237 (267)
34 1npe_A Nidogen, entactin; glyc 99.8 8.5E-19 2.9E-23 182.4 27.1 196 179-466 35-244 (267)
35 3m0c_C LDL receptor, low-densi 99.8 4.9E-19 1.7E-23 210.0 26.4 198 177-461 421-633 (791)
36 2fp8_A Strictosidine synthase; 99.8 1.8E-18 6.2E-23 185.2 26.8 243 176-530 15-312 (322)
37 1rwi_B Serine/threonine-protei 99.8 1.1E-18 3.7E-23 180.9 24.1 232 130-459 25-262 (270)
38 2p4o_A Hypothetical protein; p 99.8 2.2E-17 7.6E-22 175.5 28.7 233 180-521 32-279 (306)
39 3a9g_A Putative uncharacterize 99.8 5.1E-17 1.8E-21 176.2 28.7 269 178-529 27-350 (354)
40 2ism_A Putative oxidoreductase 99.8 3.6E-17 1.2E-21 177.5 27.3 270 178-520 29-334 (352)
41 1n7d_A LDL receptor, low-densi 99.8 1.6E-18 5.3E-23 204.7 12.4 233 187-530 374-613 (699)
42 1n7d_A LDL receptor, low-densi 99.7 4.9E-18 1.7E-22 200.4 13.5 203 177-467 403-621 (699)
43 3e5z_A Putative gluconolactona 99.7 2.3E-15 7.8E-20 158.5 32.1 230 177-531 25-286 (296)
44 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.7E-15 6E-20 160.2 30.4 242 177-531 15-299 (314)
45 2g8s_A Glucose/sorbosone dehyd 99.7 4.6E-16 1.6E-20 168.8 24.9 286 178-529 16-352 (353)
46 2fp8_A Strictosidine synthase; 99.7 9.6E-16 3.3E-20 163.9 25.2 243 127-459 17-311 (322)
47 2qe8_A Uncharacterized protein 99.7 6.9E-15 2.4E-19 158.9 29.0 261 180-528 17-318 (343)
48 3dr2_A Exported gluconolactona 99.7 6.7E-15 2.3E-19 156.0 27.8 224 178-527 43-302 (305)
49 3das_A Putative oxidoreductase 99.7 1.6E-14 5.6E-19 154.4 30.6 266 176-520 28-327 (347)
50 2qe8_A Uncharacterized protein 99.7 6.9E-15 2.4E-19 158.9 26.9 261 129-450 17-313 (343)
51 2p4o_A Hypothetical protein; p 99.7 1.6E-14 5.5E-19 153.3 27.8 198 222-531 32-242 (306)
52 3g4e_A Regucalcin; six bladed 99.7 3E-14 1E-18 150.5 29.5 226 177-521 10-263 (297)
53 3e5z_A Putative gluconolactona 99.7 9.7E-14 3.3E-18 146.0 31.6 193 219-530 25-245 (296)
54 2dg1_A DRP35, lactonase; beta 99.6 2.9E-13 9.9E-18 144.6 30.0 233 179-520 44-300 (333)
55 3a9g_A Putative uncharacterize 99.6 8.6E-13 3E-17 142.9 33.8 228 219-530 26-295 (354)
56 3dsm_A Uncharacterized protein 99.6 1.5E-13 5E-18 147.4 26.5 236 130-465 45-306 (328)
57 3dr2_A Exported gluconolactona 99.6 2.9E-13 9.8E-18 143.4 27.5 194 219-528 42-264 (305)
58 2ism_A Putative oxidoreductase 99.6 9.3E-14 3.2E-18 150.5 24.1 259 128-448 30-335 (352)
59 3g4e_A Regucalcin; six bladed 99.6 1.9E-13 6.6E-18 144.2 25.9 201 218-530 9-228 (297)
60 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2E-13 7E-18 144.2 26.1 240 126-459 15-297 (314)
61 3dsm_A Uncharacterized protein 99.6 8.2E-13 2.8E-17 141.6 28.5 230 180-529 44-300 (328)
62 3hfq_A Uncharacterized protein 99.6 1.1E-12 3.6E-17 141.1 29.0 258 179-527 39-313 (347)
63 3no2_A Uncharacterized protein 99.5 2.5E-11 8.4E-16 126.8 32.2 206 181-464 38-256 (276)
64 1cru_A Protein (soluble quinop 99.5 3.1E-12 1.1E-16 143.0 26.6 165 177-371 24-246 (454)
65 3vgz_A Uncharacterized protein 99.5 7.8E-11 2.7E-15 126.1 34.4 264 131-520 43-334 (353)
66 2ghs_A AGR_C_1268P; regucalcin 99.4 5.6E-11 1.9E-15 127.1 30.0 224 178-521 47-293 (326)
67 3hfq_A Uncharacterized protein 99.4 1.6E-10 5.6E-15 123.9 33.1 236 200-529 19-269 (347)
68 3no2_A Uncharacterized protein 99.4 5.9E-11 2E-15 123.9 28.6 221 190-521 4-233 (276)
69 2g8s_A Glucose/sorbosone dehyd 99.4 1.3E-11 4.6E-16 133.5 22.9 268 127-454 16-350 (353)
70 2dg1_A DRP35, lactonase; beta 99.4 3.6E-11 1.2E-15 128.2 24.6 232 130-448 46-301 (333)
71 3vgz_A Uncharacterized protein 99.4 1.2E-09 4E-14 116.8 35.4 241 180-529 41-301 (353)
72 3sre_A PON1, serum paraoxonase 99.3 5.7E-11 1.9E-15 127.5 21.4 204 222-530 50-297 (355)
73 3das_A Putative oxidoreductase 99.3 2.9E-10 9.9E-15 121.4 26.4 227 218-529 28-290 (347)
74 3u4y_A Uncharacterized protein 99.3 1.3E-09 4.5E-14 115.6 31.7 219 190-530 9-251 (331)
75 3scy_A Hypothetical bacterial 99.3 7.1E-10 2.4E-14 119.6 30.0 258 178-527 48-333 (361)
76 2ghs_A AGR_C_1268P; regucalcin 99.3 6E-10 2E-14 119.1 28.3 194 220-529 47-258 (326)
77 3qqz_A Putative uncharacterize 99.3 6.4E-10 2.2E-14 113.6 26.6 214 180-459 27-251 (255)
78 2ymu_A WD-40 repeat protein; u 99.3 2.5E-06 8.6E-11 97.6 59.5 491 133-750 21-565 (577)
79 3u4y_A Uncharacterized protein 99.3 1.6E-09 5.5E-14 114.9 29.7 272 137-530 6-303 (331)
80 3sre_A PON1, serum paraoxonase 99.3 4.5E-10 1.5E-14 120.4 22.9 188 180-450 50-290 (355)
81 3qqz_A Putative uncharacterize 99.3 2E-09 6.8E-14 110.0 26.5 213 222-530 27-252 (255)
82 2wg3_C Hedgehog-interacting pr 99.2 1.1E-09 3.8E-14 122.1 23.3 278 177-529 11-371 (463)
83 2iwa_A Glutamine cyclotransfer 99.2 7.7E-09 2.6E-13 106.2 26.9 204 181-458 22-237 (266)
84 2p9w_A MAL S 1 allergenic prot 99.2 8.4E-10 2.9E-14 115.6 19.8 222 220-529 11-263 (334)
85 1ri6_A Putative isomerase YBHE 99.2 3.6E-08 1.2E-12 104.4 32.2 240 180-527 38-304 (343)
86 1cru_A Protein (soluble quinop 99.2 2E-09 6.8E-14 120.2 23.0 174 118-312 15-248 (454)
87 2ymu_A WD-40 repeat protein; u 99.2 3E-05 1E-09 88.6 59.2 446 182-749 19-523 (577)
88 2p9w_A MAL S 1 allergenic prot 99.1 1.9E-09 6.6E-14 112.9 20.6 210 130-381 14-265 (334)
89 3scy_A Hypothetical bacterial 99.1 1.2E-07 4.2E-12 102.0 32.1 234 200-527 30-287 (361)
90 1jof_A Carboxy-CIS,CIS-muconat 99.1 9.5E-09 3.2E-13 111.3 22.8 255 179-527 39-337 (365)
91 1l0q_A Surface layer protein; 99.0 5.6E-07 1.9E-11 97.5 35.9 224 181-529 33-273 (391)
92 3bws_A Protein LP49; two-domai 99.0 4.2E-07 1.4E-11 100.0 33.2 272 181-591 124-420 (433)
93 3nol_A Glutamine cyclotransfer 99.0 2.9E-07 1E-11 93.4 27.6 197 183-457 46-255 (262)
94 1ri6_A Putative isomerase YBHE 99.0 9.6E-07 3.3E-11 93.3 32.9 238 191-529 5-260 (343)
95 3hxj_A Pyrrolo-quinoline quino 99.0 1.1E-07 3.9E-12 100.5 25.4 269 119-528 12-281 (330)
96 3bws_A Protein LP49; two-domai 98.9 1.1E-06 3.8E-11 96.6 33.6 226 181-527 171-428 (433)
97 2iwa_A Glutamine cyclotransfer 98.9 2.6E-07 8.8E-12 94.8 25.8 204 222-529 21-235 (266)
98 3mbr_X Glutamine cyclotransfer 98.9 1.5E-06 5.2E-11 87.4 28.4 198 182-456 23-233 (243)
99 1l0q_A Surface layer protein; 98.8 9.5E-06 3.3E-10 87.7 35.8 213 192-529 3-231 (391)
100 1jof_A Carboxy-CIS,CIS-muconat 98.8 1.2E-06 4.1E-11 94.6 28.3 226 202-522 19-277 (365)
101 1nir_A Nitrite reductase; hemo 98.8 3.5E-06 1.2E-10 96.3 33.2 197 187-465 145-360 (543)
102 3hxj_A Pyrrolo-quinoline quino 98.8 1.9E-06 6.5E-11 90.9 28.9 207 190-521 107-315 (330)
103 3nok_A Glutaminyl cyclase; bet 98.8 9.9E-07 3.4E-11 89.5 24.5 194 183-454 58-262 (268)
104 2wg3_C Hedgehog-interacting pr 98.8 1.9E-06 6.5E-11 96.0 27.9 268 127-446 12-354 (463)
105 3sjl_D Methylamine dehydrogena 98.7 2.8E-06 9.7E-11 91.8 26.7 108 134-251 38-167 (386)
106 1nir_A Nitrite reductase; hemo 98.7 3E-05 1E-09 88.6 36.2 193 137-384 146-359 (543)
107 1jmx_B Amine dehydrogenase; ox 98.7 5.2E-06 1.8E-10 87.9 26.9 159 183-385 3-180 (349)
108 1nr0_A Actin interacting prote 98.7 0.0015 5.2E-08 75.4 49.6 232 181-527 20-266 (611)
109 3nok_A Glutaminyl cyclase; bet 98.7 3.3E-06 1.1E-10 85.6 22.8 200 223-527 56-262 (268)
110 1pby_B Quinohemoprotein amine 98.7 5.6E-06 1.9E-10 87.1 26.0 117 181-326 35-170 (337)
111 3c75_H MADH, methylamine dehyd 98.6 8.7E-06 3E-10 89.5 27.7 104 138-251 82-207 (426)
112 3nol_A Glutamine cyclotransfer 98.6 8.5E-06 2.9E-10 82.7 25.1 201 222-527 43-252 (262)
113 3s25_A Hypothetical 7-bladed b 98.6 3.2E-06 1.1E-10 88.8 23.0 243 136-528 21-290 (302)
114 1pby_B Quinohemoprotein amine 98.6 1.8E-05 6.2E-10 83.0 28.9 139 199-384 11-167 (337)
115 3mbr_X Glutamine cyclotransfer 98.6 5.3E-05 1.8E-09 76.1 28.5 205 220-528 19-232 (243)
116 2mad_H Methylamine dehydrogena 98.5 7.7E-05 2.6E-09 80.8 31.5 105 135-250 27-154 (373)
117 3q6k_A 43.2 kDa salivary prote 98.5 0.00013 4.4E-09 78.4 32.2 247 130-447 27-343 (381)
118 3sjl_D Methylamine dehydrogena 98.5 2.2E-05 7.4E-10 84.9 25.0 112 188-326 41-176 (386)
119 1qks_A Cytochrome CD1 nitrite 98.5 0.00029 9.9E-09 80.6 35.0 196 187-465 163-378 (567)
120 3sfz_A APAF-1, apoptotic pepti 98.5 0.0015 5.1E-08 82.0 44.9 193 181-450 659-863 (1249)
121 3s25_A Hypothetical 7-bladed b 98.4 1E-05 3.5E-10 84.9 20.4 168 189-463 24-218 (302)
122 2oiz_A Aromatic amine dehydrog 98.4 7.2E-05 2.4E-09 80.6 27.4 70 181-251 52-138 (361)
123 1jmx_B Amine dehydrogenase; ox 98.4 2.9E-05 9.8E-10 82.0 23.5 158 133-326 4-182 (349)
124 4a2l_A BT_4663, two-component 98.4 0.0099 3.4E-07 70.9 54.1 239 182-520 133-376 (795)
125 3v9f_A Two-component system se 98.4 0.00029 9.8E-09 84.1 33.7 241 181-530 408-655 (781)
126 2mad_H Methylamine dehydrogena 98.4 0.00031 1.1E-08 76.0 30.3 110 130-250 68-193 (373)
127 4a2l_A BT_4663, two-component 98.4 0.013 4.3E-07 70.0 57.2 321 132-568 46-387 (795)
128 3c75_H MADH, methylamine dehyd 98.3 9.9E-05 3.4E-09 81.0 24.9 108 233-384 84-213 (426)
129 3q6k_A 43.2 kDa salivary prote 98.3 0.00038 1.3E-08 74.7 28.0 246 180-518 26-341 (381)
130 1mda_H Methylamine dehydrogena 98.3 0.00011 3.6E-09 79.3 23.5 67 181-248 67-151 (368)
131 1r5m_A SIR4-interacting protei 98.3 0.0031 1.1E-07 67.9 35.6 295 123-527 40-357 (425)
132 3v9f_A Two-component system se 98.3 0.02 6.8E-07 68.1 51.6 256 181-520 116-382 (781)
133 1fwx_A Nitrous oxide reductase 98.2 3.4E-05 1.2E-09 87.0 18.8 49 190-240 100-154 (595)
134 1gxr_A ESG1, transducin-like e 98.2 0.0046 1.6E-07 64.2 34.3 220 181-524 99-330 (337)
135 1qks_A Cytochrome CD1 nitrite 98.2 0.00056 1.9E-08 78.2 28.9 103 229-383 163-278 (567)
136 3amr_A 3-phytase; beta-propell 98.2 0.00028 9.4E-09 74.6 23.3 149 188-380 37-209 (355)
137 2oiz_A Aromatic amine dehydrog 98.1 0.0024 8.3E-08 68.5 31.2 104 192-323 17-144 (361)
138 1gxr_A ESG1, transducin-like e 98.1 0.013 4.3E-07 60.8 36.0 225 181-527 53-292 (337)
139 3ow8_A WD repeat-containing pr 98.1 0.0033 1.1E-07 66.0 31.2 219 182-525 83-315 (321)
140 2ece_A 462AA long hypothetical 98.1 0.0035 1.2E-07 68.4 30.9 213 231-529 93-350 (462)
141 2ece_A 462AA long hypothetical 98.0 0.00062 2.1E-08 74.3 23.8 206 138-379 93-350 (462)
142 3sfz_A APAF-1, apoptotic pepti 98.0 0.065 2.2E-06 67.0 46.3 67 180-250 616-685 (1249)
143 1r5m_A SIR4-interacting protei 98.0 0.022 7.5E-07 61.1 36.7 164 180-379 46-234 (425)
144 1mda_H Methylamine dehydrogena 98.0 0.0002 7E-09 77.1 19.5 103 191-320 32-158 (368)
145 4a9v_A PHOX; hydrolase, beta-p 98.0 7.4E-05 2.5E-09 83.4 15.8 131 218-370 380-549 (592)
146 3ow8_A WD repeat-containing pr 98.0 0.027 9.1E-07 59.0 36.7 181 223-525 82-273 (321)
147 1fwx_A Nitrous oxide reductase 97.9 0.00074 2.5E-08 76.2 22.4 220 127-380 91-360 (595)
148 1got_B GT-beta; complex (GTP-b 97.9 0.034 1.2E-06 58.5 36.3 226 181-527 57-297 (340)
149 3mkq_A Coatomer beta'-subunit; 97.9 0.079 2.7E-06 62.7 44.0 145 181-379 15-170 (814)
150 2hqs_A Protein TOLB; TOLB, PAL 97.8 0.0097 3.3E-07 65.0 29.0 173 199-464 159-348 (415)
151 1tl2_A L10, protein (tachylect 97.8 0.00023 7.8E-09 69.7 13.6 155 291-530 40-209 (236)
152 1pgu_A Actin interacting prote 97.8 0.086 2.9E-06 59.8 45.9 199 180-463 19-241 (615)
153 3ei3_B DNA damage-binding prot 97.8 0.036 1.2E-06 59.0 32.0 149 181-378 75-233 (383)
154 1got_B GT-beta; complex (GTP-b 97.8 0.059 2E-06 56.6 33.2 220 182-524 100-336 (340)
155 2ecf_A Dipeptidyl peptidase IV 97.7 0.064 2.2E-06 62.9 36.5 154 181-370 38-227 (741)
156 2z3z_A Dipeptidyl aminopeptida 97.7 0.033 1.1E-06 65.1 33.5 65 180-250 82-147 (706)
157 3zwl_B Eukaryotic translation 97.7 0.066 2.3E-06 56.0 35.7 65 182-250 35-102 (369)
158 4a9v_A PHOX; hydrolase, beta-p 97.7 0.00046 1.6E-08 77.1 15.4 125 349-518 381-549 (592)
159 1vyh_C Platelet-activating fac 97.7 0.066 2.3E-06 58.1 32.8 66 181-250 152-220 (410)
160 1tl2_A L10, protein (tachylect 97.6 0.00043 1.5E-08 67.8 12.3 153 179-380 40-209 (236)
161 1k8k_C P40, ARP2/3 complex 41 97.6 0.031 1.1E-06 58.8 28.3 65 182-250 11-80 (372)
162 1vyh_C Platelet-activating fac 97.6 0.061 2.1E-06 58.3 30.7 143 181-378 110-262 (410)
163 4gqb_B Methylosome protein 50; 97.6 0.056 1.9E-06 57.3 29.5 150 182-379 85-244 (344)
164 3amr_A 3-phytase; beta-propell 97.6 0.002 6.9E-08 68.0 17.5 144 193-380 89-262 (355)
165 3frx_A Guanine nucleotide-bind 97.5 0.12 4E-06 53.8 30.2 65 182-250 68-135 (319)
166 3azo_A Aminopeptidase; POP fam 97.5 0.089 3E-06 60.8 31.9 201 181-467 25-281 (662)
167 4g56_B MGC81050 protein; prote 97.4 0.035 1.2E-06 59.1 26.0 68 182-250 97-167 (357)
168 3iz6_a 40S ribosomal protein R 97.4 0.075 2.6E-06 56.9 28.7 65 182-250 69-136 (380)
169 2pbi_B Guanine nucleotide-bind 97.4 0.18 6.2E-06 53.2 33.6 222 181-525 108-351 (354)
170 1k32_A Tricorn protease; prote 97.4 0.51 1.7E-05 57.9 45.8 68 182-250 55-140 (1045)
171 2ecf_A Dipeptidyl peptidase IV 97.4 0.066 2.2E-06 62.8 29.8 99 131-241 111-228 (741)
172 1nr0_A Actin interacting prote 97.4 0.33 1.1E-05 55.6 52.5 100 647-749 492-596 (611)
173 3vl1_A 26S proteasome regulato 97.4 0.22 7.6E-06 53.3 35.2 151 128-319 56-211 (420)
174 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.21 7.1E-06 52.5 32.6 67 182-249 19-88 (345)
175 2aq5_A Coronin-1A; WD40 repeat 97.3 0.16 5.6E-06 54.4 30.2 151 181-379 83-252 (402)
176 2pm9_A Protein WEB1, protein t 97.3 0.059 2E-06 57.8 26.2 67 181-250 69-142 (416)
177 4h5i_A Guanine nucleotide-exch 97.3 0.19 6.6E-06 53.4 30.0 68 429-528 271-340 (365)
178 3mkq_A Coatomer beta'-subunit; 97.3 0.5 1.7E-05 55.6 44.7 104 133-250 18-125 (814)
179 3ott_A Two-component system se 97.3 0.35 1.2E-05 57.0 34.4 244 181-528 147-398 (758)
180 3zwu_A Alkaline phosphatase PH 97.2 0.0033 1.1E-07 71.3 15.4 124 349-517 381-548 (592)
181 3ei3_B DNA damage-binding prot 97.2 0.31 1E-05 51.6 31.2 147 181-379 120-280 (383)
182 3dm0_A Maltose-binding peripla 97.2 0.28 9.5E-06 57.1 32.2 242 181-525 432-687 (694)
183 2ynn_A Coatomer subunit beta'; 97.2 0.27 9.2E-06 50.5 32.8 145 181-379 15-170 (304)
184 4ery_A WD repeat-containing pr 97.2 0.28 9.4E-06 50.3 37.5 146 223-459 25-178 (312)
185 3odt_A Protein DOA1; ubiquitin 97.2 0.27 9.3E-06 49.9 32.8 64 182-250 21-87 (313)
186 2z3z_A Dipeptidyl aminopeptida 97.1 0.62 2.1E-05 54.0 40.1 109 222-369 82-198 (706)
187 2ojh_A Uncharacterized protein 97.1 0.069 2.4E-06 53.7 22.8 147 181-381 43-206 (297)
188 4e54_B DNA damage-binding prot 97.1 0.26 8.9E-06 53.6 28.9 112 182-320 122-240 (435)
189 1erj_A Transcriptional repress 97.1 0.43 1.5E-05 51.0 30.7 151 182-379 126-285 (393)
190 4h5i_A Guanine nucleotide-exch 97.1 0.057 1.9E-06 57.6 22.7 186 181-451 135-336 (365)
191 3dwl_C Actin-related protein 2 97.0 0.013 4.6E-07 62.2 17.0 63 183-249 15-82 (377)
192 4aez_A CDC20, WD repeat-contai 97.0 0.49 1.7E-05 50.6 35.8 226 181-527 136-376 (401)
193 2vdu_B TRNA (guanine-N(7)-)-me 97.0 0.59 2E-05 50.9 34.2 158 223-463 104-274 (450)
194 3ott_A Two-component system se 97.0 0.98 3.3E-05 53.1 44.7 271 132-520 25-298 (758)
195 2xzm_R RACK1; ribosome, transl 97.0 0.43 1.5E-05 49.9 28.0 65 182-250 79-146 (343)
196 1k32_A Tricorn protease; prote 96.9 1.3 4.5E-05 54.1 44.5 102 199-325 33-149 (1045)
197 4gqb_B Methylosome protein 50; 96.9 0.15 5E-06 54.0 24.0 154 181-385 129-294 (344)
198 4g56_B MGC81050 protein; prote 96.9 0.042 1.4E-06 58.4 19.7 197 181-466 141-350 (357)
199 1k8k_C P40, ARP2/3 complex 41 96.9 0.56 1.9E-05 49.0 32.9 108 132-249 12-123 (372)
200 1xfd_A DIP, dipeptidyl aminope 96.9 0.29 1E-05 56.9 28.3 60 181-240 18-79 (723)
201 2hqs_A Protein TOLB; TOLB, PAL 96.9 0.14 4.8E-06 55.7 23.7 188 181-462 180-388 (415)
202 3odt_A Protein DOA1; ubiquitin 96.8 0.52 1.8E-05 47.7 30.9 184 181-462 61-257 (313)
203 2ojh_A Uncharacterized protein 96.8 0.18 6.3E-06 50.4 22.7 37 429-466 174-212 (297)
204 1yfq_A Cell cycle arrest prote 96.8 0.086 2.9E-06 54.7 20.8 65 181-250 13-85 (342)
205 2pbi_B Guanine nucleotide-bind 96.8 0.67 2.3E-05 48.8 35.2 65 182-250 67-134 (354)
206 3dm0_A Maltose-binding peripla 96.8 1.2 4.2E-05 51.5 35.9 187 182-458 385-589 (694)
207 2xzm_R RACK1; ribosome, transl 96.7 0.73 2.5E-05 48.1 32.7 69 223-320 78-149 (343)
208 3o4h_A Acylamino-acid-releasin 96.7 0.049 1.7E-06 62.0 19.4 185 132-384 25-231 (582)
209 2pm9_A Protein WEB1, protein t 96.7 0.17 5.7E-06 54.1 22.6 27 353-380 167-196 (416)
210 4ery_A WD repeat-containing pr 96.7 0.68 2.3E-05 47.3 36.0 149 181-382 67-225 (312)
211 3zwu_A Alkaline phosphatase PH 96.7 0.021 7E-07 64.9 15.4 127 218-369 380-548 (592)
212 2aq5_A Coronin-1A; WD40 repeat 96.6 0.19 6.7E-06 53.8 22.6 118 223-382 83-209 (402)
213 3o4h_A Acylamino-acid-releasin 96.6 0.055 1.9E-06 61.6 19.1 70 355-464 153-231 (582)
214 1sq9_A Antiviral protein SKI8; 96.6 0.34 1.2E-05 51.3 24.3 125 293-462 188-324 (397)
215 1erj_A Transcriptional repress 96.6 1 3.5E-05 48.1 36.8 190 182-450 67-279 (393)
216 3pe7_A Oligogalacturonate lyas 96.6 0.46 1.6E-05 50.2 24.9 61 186-250 42-108 (388)
217 2xyi_A Probable histone-bindin 96.6 0.59 2E-05 50.7 26.2 114 223-379 183-307 (430)
218 3jrp_A Fusion protein of prote 96.5 0.94 3.2E-05 47.2 27.7 67 181-250 13-85 (379)
219 3i2n_A WD repeat-containing pr 96.5 0.93 3.2E-05 46.8 28.6 68 181-250 20-96 (357)
220 1sq9_A Antiviral protein SKI8; 96.5 1.1 3.8E-05 47.2 30.7 82 429-527 235-318 (397)
221 3frx_A Guanine nucleotide-bind 96.4 1.1 3.8E-05 46.2 35.7 114 182-327 20-146 (319)
222 3azo_A Aminopeptidase; POP fam 96.4 0.56 1.9E-05 53.9 25.8 162 181-386 131-331 (662)
223 2xyi_A Probable histone-bindin 96.3 1.4 4.8E-05 47.6 27.5 151 181-378 183-350 (430)
224 1yfq_A Cell cycle arrest prote 96.3 1.3 4.4E-05 45.5 27.5 67 181-250 58-128 (342)
225 4aow_A Guanine nucleotide-bind 96.2 1.3 4.4E-05 45.4 33.6 66 181-249 88-155 (340)
226 3f3f_A Nucleoporin SEH1; struc 96.2 1.4 4.7E-05 44.9 26.8 67 181-250 13-87 (351)
227 2j04_A TAU60, YPL007P, hypothe 96.0 2.1 7.1E-05 48.2 26.6 162 180-386 86-260 (588)
228 1pgu_A Actin interacting prote 96.0 2.7 9.4E-05 47.1 52.5 99 646-747 488-597 (615)
229 3dw8_B Serine/threonine-protei 96.0 1.2 4E-05 48.0 24.3 71 293-378 179-255 (447)
230 3jrp_A Fusion protein of prote 95.9 2 7E-05 44.5 27.1 69 182-251 58-132 (379)
231 3iz6_a 40S ribosomal protein R 95.8 2.4 8.2E-05 44.8 30.3 27 223-250 68-94 (380)
232 3vl1_A 26S proteasome regulato 95.8 2.5 8.4E-05 44.9 33.1 146 182-382 59-214 (420)
233 3fm0_A Protein CIAO1; WDR39,SG 95.8 2.3 7.8E-05 44.3 32.5 27 223-250 18-44 (345)
234 3dw8_B Serine/threonine-protei 95.8 2.7 9.2E-05 45.0 33.6 27 353-380 179-206 (447)
235 1xfd_A DIP, dipeptidyl aminope 95.6 3.4 0.00012 47.7 27.9 58 293-369 18-78 (723)
236 4e54_B DNA damage-binding prot 95.6 0.37 1.3E-05 52.3 18.4 112 224-381 122-240 (435)
237 2gop_A Trilobed protease; beta 95.5 2.8 9.5E-05 43.2 25.4 56 180-240 59-122 (347)
238 3lrv_A PRE-mRNA-splicing facto 95.4 1.9 6.5E-05 44.8 22.4 64 294-378 128-198 (343)
239 3jro_A Fusion protein of prote 95.3 1 3.5E-05 52.9 22.2 66 182-250 12-83 (753)
240 4aez_A CDC20, WD repeat-contai 95.2 4 0.00014 43.3 36.8 63 185-250 99-162 (401)
241 2j04_A TAU60, YPL007P, hypothe 95.1 3.9 0.00013 46.0 24.7 46 546-594 243-290 (588)
242 3pe7_A Oligogalacturonate lyas 95.0 4 0.00014 42.7 27.6 30 296-325 85-117 (388)
243 2pm7_B Protein transport prote 95.0 3.5 0.00012 41.7 24.8 66 182-250 12-83 (297)
244 4a11_B DNA excision repair pro 95.0 4.2 0.00014 42.6 32.1 29 223-251 45-73 (408)
245 3k26_A Polycomb protein EED; W 95.0 3.8 0.00013 42.1 28.0 112 181-319 71-191 (366)
246 3q7m_A Lipoprotein YFGL, BAMB; 94.3 6.1 0.00021 41.4 35.2 149 190-387 53-214 (376)
247 3zwl_B Eukaryotic translation 94.2 5.6 0.00019 40.8 36.4 110 637-751 208-332 (369)
248 3dwl_C Actin-related protein 2 94.0 2.7 9.3E-05 43.9 19.5 75 646-721 205-280 (377)
249 3q7m_A Lipoprotein YFGL, BAMB; 94.0 7.1 0.00024 40.9 35.9 191 189-464 102-300 (376)
250 3vu4_A KMHSV2; beta-propeller 93.8 7.5 0.00026 40.5 31.4 64 182-250 22-87 (355)
251 3k26_A Polycomb protein EED; W 93.7 7.1 0.00024 40.0 28.3 107 294-459 72-190 (366)
252 4ggc_A P55CDC, cell division c 93.5 6.9 0.00023 39.2 25.2 65 184-250 30-95 (318)
253 4aow_A Guanine nucleotide-bind 93.3 7.8 0.00027 39.3 37.4 65 182-250 41-114 (340)
254 4a5s_A Dipeptidyl peptidase 4 93.1 16 0.00056 42.3 29.7 56 184-239 21-79 (740)
255 3f3f_A Nucleoporin SEH1; struc 93.1 8.2 0.00028 38.8 29.3 68 181-251 59-141 (351)
256 4a11_B DNA excision repair pro 92.8 10 0.00035 39.4 27.5 69 182-250 46-128 (408)
257 3c5m_A Oligogalacturonate lyas 92.8 10 0.00036 39.4 23.2 65 183-250 39-108 (396)
258 3mmy_A MRNA export factor; mRN 92.5 10 0.00035 38.7 29.9 66 181-250 41-114 (368)
259 2oaj_A Protein SNI1; WD40 repe 92.2 24 0.00083 42.1 26.5 215 181-463 19-245 (902)
260 3i2n_A WD repeat-containing pr 92.1 11 0.00039 38.3 30.3 25 353-378 20-50 (357)
261 3jro_A Fusion protein of prote 92.0 6.3 0.00022 46.1 20.3 69 182-251 56-130 (753)
262 2hes_X YDR267CP; beta-propelle 91.9 12 0.00043 38.2 29.2 65 182-250 61-135 (330)
263 2xdw_A Prolyl endopeptidase; a 91.4 24 0.00082 40.6 27.8 56 182-241 127-190 (710)
264 4gga_A P55CDC, cell division c 90.6 20 0.00067 38.1 33.7 63 182-250 150-215 (420)
265 1z68_A Fibroblast activation p 90.4 9.8 0.00034 43.8 19.8 29 354-383 112-142 (719)
266 1kb0_A Quinohemoprotein alcoho 90.3 30 0.001 39.8 34.5 58 190-250 77-144 (677)
267 1z68_A Fibroblast activation p 90.2 3.7 0.00012 47.5 15.8 58 183-240 19-78 (719)
268 3gre_A Serine/threonine-protei 89.3 24 0.00083 37.3 27.8 157 132-319 67-244 (437)
269 3bg1_A Protein SEC13 homolog; 89.2 20 0.0007 36.3 24.5 66 182-250 16-87 (316)
270 1w6s_A Methanol dehydrogenase 89.2 34 0.0012 38.7 33.8 60 190-250 62-137 (599)
271 2gop_A Trilobed protease; beta 87.6 26 0.00089 35.6 30.6 43 200-250 44-91 (347)
272 2vdu_B TRNA (guanine-N(7)-)-me 87.4 34 0.0012 36.6 36.4 27 355-382 8-36 (450)
273 3v7d_B Cell division control p 86.6 37 0.0012 36.2 35.8 32 429-463 312-344 (464)
274 2pm7_B Protein transport prote 85.6 31 0.0011 34.4 26.5 66 182-250 56-129 (297)
275 2j04_B YDR362CP, TAU91; beta p 85.4 25 0.00085 39.0 18.1 146 181-379 268-426 (524)
276 2j04_B YDR362CP, TAU91; beta p 84.6 53 0.0018 36.3 25.9 67 430-529 358-426 (524)
277 2ynn_A Coatomer subunit beta'; 84.0 37 0.0013 34.0 35.0 102 353-525 15-122 (304)
278 2ad6_A Methanol dehydrogenase 83.9 60 0.002 36.3 33.8 58 190-250 62-131 (571)
279 4gq1_A NUP37; propeller, trans 79.9 61 0.0021 33.9 17.9 66 182-251 139-216 (393)
280 2hes_X YDR267CP; beta-propelle 78.4 61 0.0021 32.8 33.8 27 223-250 60-86 (330)
281 4gga_A P55CDC, cell division c 78.3 71 0.0024 33.6 33.9 66 355-458 109-175 (420)
282 1kb0_A Quinohemoprotein alcoho 77.5 1.1E+02 0.0036 35.1 24.2 53 190-242 174-263 (677)
283 3mmy_A MRNA export factor; mRN 77.4 63 0.0021 32.5 28.3 56 694-749 275-330 (368)
284 2oaj_A Protein SNI1; WD40 repe 76.1 1.3E+02 0.0046 35.6 23.5 28 353-381 19-48 (902)
285 2oit_A Nucleoporin 214KDA; NH2 75.3 42 0.0014 36.0 15.1 116 181-323 94-226 (434)
286 2bkl_A Prolyl endopeptidase; m 73.9 1.3E+02 0.0043 34.3 26.1 57 182-241 123-187 (695)
287 3c5m_A Oligogalacturonate lyas 72.2 64 0.0022 33.1 15.3 67 182-250 190-270 (396)
288 2oit_A Nucleoporin 214KDA; NH2 68.1 45 0.0015 35.7 13.2 32 429-463 194-225 (434)
289 3bg1_A Protein SEC13 homolog; 65.2 1.2E+02 0.004 30.4 23.8 66 182-250 60-133 (316)
290 1kv9_A Type II quinohemoprotei 65.0 1.9E+02 0.0065 32.8 34.4 58 190-250 66-133 (668)
291 3elq_A Arylsulfate sulfotransf 64.0 1.8E+02 0.0063 32.3 22.4 138 185-330 212-395 (571)
292 3b7f_A Glycosyl hydrolase, BNR 63.8 1.4E+02 0.0049 31.0 21.6 179 181-382 56-263 (394)
293 1yr2_A Prolyl oligopeptidase; 62.5 2.2E+02 0.0074 32.6 28.9 255 183-553 166-477 (741)
294 4ghb_A Hypothetical protein; A 62.5 1.3E+02 0.0043 29.9 13.9 105 629-735 41-166 (272)
295 3lrv_A PRE-mRNA-splicing facto 61.5 1.4E+02 0.0047 30.1 26.7 27 430-459 173-199 (343)
296 1flg_A Protein (quinoprotein e 61.1 2.1E+02 0.0071 31.9 34.6 58 190-250 68-133 (582)
297 3osv_A Flagellar basal-BODY RO 60.6 18 0.00061 32.3 6.7 52 23-79 26-79 (138)
298 2xbg_A YCF48-like protein; pho 55.9 1.8E+02 0.006 29.5 29.8 64 182-249 38-104 (327)
299 2xbg_A YCF48-like protein; pho 55.4 1.8E+02 0.0061 29.4 27.7 146 183-380 83-233 (327)
300 2ad6_A Methanol dehydrogenase 49.6 3.1E+02 0.01 30.4 17.0 24 301-324 474-499 (571)
301 4gq1_A NUP37; propeller, trans 48.0 2.5E+02 0.0085 28.9 18.0 26 430-458 189-215 (393)
302 1yiq_A Quinohemoprotein alcoho 46.7 3.7E+02 0.013 30.5 20.4 64 184-247 239-342 (689)
303 3v7d_B Cell division control p 44.8 2.9E+02 0.01 28.8 34.2 50 545-598 287-337 (464)
304 1k3i_A Galactose oxidase precu 43.4 3.9E+02 0.013 29.9 25.1 69 181-250 187-271 (656)
305 3gre_A Serine/threonine-protei 42.4 3.1E+02 0.01 28.3 23.9 22 429-450 65-87 (437)
306 2ovr_B FBW7, F-BOX/WD repeat p 40.4 3.4E+02 0.011 28.2 36.7 55 190-250 128-185 (445)
307 3c12_A FLGD, flagellar protein 39.6 66 0.0023 28.4 6.9 43 37-79 37-81 (138)
308 4a5s_A Dipeptidyl peptidase 4 37.2 5.1E+02 0.017 29.4 35.4 32 295-326 20-52 (740)
309 3b7f_A Glycosyl hydrolase, BNR 35.5 3.9E+02 0.013 27.5 24.9 61 187-249 19-86 (394)
310 1yiq_A Quinohemoprotein alcoho 33.9 5.6E+02 0.019 28.9 33.1 58 190-250 70-137 (689)
311 4ggc_A P55CDC, cell division c 30.1 3.8E+02 0.013 25.8 33.9 65 355-458 29-95 (318)
312 3dzw_A Agglutinin; lectin, man 23.6 3.1E+02 0.011 22.6 9.3 57 503-564 20-76 (109)
313 1w6s_A Methanol dehydrogenase 23.5 7.9E+02 0.027 27.3 30.6 20 355-374 396-415 (599)
No 1
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.97 E-value=6e-30 Score=285.71 Aligned_cols=286 Identities=15% Similarity=0.150 Sum_probs=215.9
Q ss_pred CCCeEEEEec-----cCccCCccCCCCCcccccc-cccCceEEEEcCC---CCEEEEeC-ceEEEEcC-CCcEEEEeccC
Q psy4832 149 FPRTVSVVMG-----TGLQRPLVCKDCDGVARDA-RLLTPVALTSGPD---GSLYVGDF-NLVRRLTP-EGNVFTVLQLS 217 (770)
Q Consensus 149 ~~~~i~~v~g-----~G~~~~~~~~~~~g~~~~~-~l~~P~~la~~~d---G~lyv~d~-~~I~~i~~-~G~v~~~~~~~ 217 (770)
.+..|++++| +|... .++|+...+ +|..|.+|++|++ |+|||+|. ++|+++++ +|.+.++++
T Consensus 107 ~~~~VsTv~G~~~~~~g~~~-----~~dG~~~~a~~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-- 179 (433)
T 4hw6_A 107 YNYVVTTFLGKLYENNTKWD-----VLAGPFDDCGAFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-- 179 (433)
T ss_dssp CCEEEEEEECCCBTTTTBCC-----CCCEETTSCCCCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--
T ss_pred eeeEEeeeecceeccCCCcc-----ccCCchHHhcccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--
Confidence 6789999999 67654 356766555 9999999999985 99999999 89999998 677777763
Q ss_pred cccccceeEEEEeCCCCcEEEEeCCCc----EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccC
Q psy4832 218 ATQVSYQYYLALSPADGHLYISDAEKH----QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSH 293 (770)
Q Consensus 218 ~~~~~~p~~lav~p~~g~lyvsd~~~~----~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~ 293 (770)
.+..|.+|++++ +|+|||+|..++ .+..+.. ++. +.. ....+.+..
T Consensus 180 --~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~-------~~~-----------------~~~---~~~~~~~~~ 229 (433)
T 4hw6_A 180 --NIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTR-------ASG-----------------FTE---RLSLCNARG 229 (433)
T ss_dssp --CCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECG-------GGT-----------------TCC---EEEEEECSS
T ss_pred --CCCCccEEEECC-CCCEEEEcCCCCcccceEEEEEC-------CCC-----------------eec---cccccccCC
Confidence 678899999997 677999998642 2444421 110 000 012235789
Q ss_pred cceEEEcc-CCcEEEEeCCC--eEEECCC-CcE-EEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EE
Q psy4832 294 PKGLAIKA-DKTMFIADGTN--IRVVSPE-GII-HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LH 367 (770)
Q Consensus 294 P~gIavd~-~G~lYvaD~~~--Ir~id~~-G~i-~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-ly 367 (770)
|.+|++|+ +|+|||+|..+ |++++++ |.+ ..++..+. ..+|.+|+++| +|+ ||
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--------------------~~~~~~ia~dp-dG~~LY 288 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--------------------KGSNFHIVWHP-TGDWAY 288 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC--------------------CSSCEEEEECT-TSSEEE
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC--------------------CCCcccEEEeC-CCCEEE
Confidence 99999999 89999999876 9999987 877 44443221 23567899999 776 99
Q ss_pred EEe--CCEEEEEcCC---Cc---EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEE----
Q psy4832 368 FID--DRVIFKLTND---LK---VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAF---- 435 (770)
Q Consensus 368 v~D--~~~I~~i~~~---G~---v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giav---- 435 (770)
|+| +++|++++.+ +. ..+++|....... ....+..+.|..|.+|++
T Consensus 289 vad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~----------------------~dg~~~~a~~~~P~giav~~n~ 346 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGW----------------------VDGMGTGARLWGPNQGIFVKNE 346 (433)
T ss_dssp EEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCC----------------------BCEEGGGSBCSSEEEEEEEECG
T ss_pred EEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCcc----------------------CCCcccceEEcCCccEEEEccc
Confidence 999 6899999865 32 3577775322111 012345678999999999
Q ss_pred -----cCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEc-
Q psy4832 436 -----SPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVS- 509 (770)
Q Consensus 436 -----d~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~- 509 (770)
+++|+|||||+.++| |++++++|.+++++|.+.. |.+ +..++.++..++|+.|.+||++
T Consensus 347 ~y~~dd~~g~lyvaD~~n~~---I~~~~~~G~v~t~~G~g~~----~~~--------G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 347 AYAGEEDEYDFYFCDRDSHT---VRVLTPEGRVTTYAGRGNS----REW--------GYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp GGTTSSCCEEEEEEETTTTE---EEEECTTSEEEEEECCCTT----CSS--------CCBCEETTTTCBCSSEEEEEEET
T ss_pred cccccCCCCcEEEEECCCCE---EEEECCCCCEEEEEeCCCC----Ccc--------ccCCCccccccEeCCCcEEEEEC
Confidence 899999999999986 7888999999999987630 000 0134446778899999999999
Q ss_pred CCCcEEEEcCCCceEEeeec
Q psy4832 510 PDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 510 ~dG~lyvaD~~~~~I~~i~~ 529 (770)
++|.|||+|.+|+||++|..
T Consensus 412 ~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 412 KRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp TTTEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEec
Confidence 79999999999999999865
No 2
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=8.9e-29 Score=275.78 Aligned_cols=316 Identities=14% Similarity=0.105 Sum_probs=216.7
Q ss_pred CCCeEEEEecc----CccCCccCCCCCcccc------cccccCceEEEEcC--CCCEEEEeC--ceEEEEcCCC-cEEEE
Q psy4832 149 FPRTVSVVMGT----GLQRPLVCKDCDGVAR------DARLLTPVALTSGP--DGSLYVGDF--NLVRRLTPEG-NVFTV 213 (770)
Q Consensus 149 ~~~~i~~v~g~----G~~~~~~~~~~~g~~~------~~~l~~P~~la~~~--dG~lyv~d~--~~I~~i~~~G-~v~~~ 213 (770)
....|++++|. |... ..+|+.. .++|..|.+|++|| +++|||++. ++|++|++.+ .+.++
T Consensus 103 ~~~~VsTl~G~~~~~g~~~-----~~dG~~~~~~~~~~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l 177 (496)
T 3kya_A 103 KKMVVGTLCGYRNNRDDQG-----WRDGPFDGPEGVKCCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSP 177 (496)
T ss_dssp CCEEEEEEEECCCTTSCCC-----CBCEESSSSTTTSCBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEE
T ss_pred EEEEEEEeeeeEcCCCcee-----ccCCcccccccccccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEE
Confidence 66799999994 3322 1234432 67789999999998 488999987 5999999765 66777
Q ss_pred eccCcccccceeEEEE-------eCCCCcEEEEeCCC------cEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCc
Q psy4832 214 LQLSATQVSYQYYLAL-------SPADGHLYISDAEK------HQILRVLSLESVADPSINWEVAVGSGERCIPGDETNC 280 (770)
Q Consensus 214 ~~~~~~~~~~p~~lav-------~p~~g~lyvsd~~~------~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~ 280 (770)
+..+...+..|.+|++ ++..+.|||+|..+ +.|.+++. +.+|.+. ..
T Consensus 178 ~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r-----~~~G~~~---------------~~ 237 (496)
T 3kya_A 178 LNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKR-----NADGTFD---------------DR 237 (496)
T ss_dssp ECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEEC-----CTTSCCS---------------TT
T ss_pred EccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEec-----CCCCcee---------------ec
Confidence 6654446788999999 97444599999986 34777642 1122210 00
Q ss_pred CCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCC--------CcEEEeecCCCCCCCcCCCccCC-Cccccc
Q psy4832 281 GDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPE--------GIIHTLIGHHKHHNIWSPFNCHR-SFPAST 348 (770)
Q Consensus 281 g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~--------G~i~t~~g~~~~~~~~~p~~~~~-~~~~~~ 348 (770)
.+. ..-+.+.+|.+|++++ ++.||++|..+ |++++++ |.+.+-.. |..++. ......
T Consensus 238 ~~~--~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~---------~~~~g~~~~l~~~ 306 (496)
T 3kya_A 238 SDI--QLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV---------KNNPNTFKQLFTI 306 (496)
T ss_dssp SCE--EEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG---------GGCTTTEEEEEEC
T ss_pred ccc--eeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc---------cccccccceeEec
Confidence 000 0112467899999999 78899999877 9999975 43310000 000000 000000
Q ss_pred ccccCcceEEEeCCCCe-EEEEe--CCEEEEEcCCCc---E---EEEecCCCCCCCCCCCCccccccccccccccccCCc
Q psy4832 349 AQLQWPTGLALSPLDDS-LHFID--DRVIFKLTNDLK---V---KIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDS 419 (770)
Q Consensus 349 ~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~~G~---v---~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (770)
..-.+|.+|+++| +|+ |||+| +|+|+|++.++. + ++++|.+...... +
T Consensus 307 ~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~---------------------D- 363 (496)
T 3kya_A 307 ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR---------------------D- 363 (496)
T ss_dssp SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB---------------------C-
T ss_pred CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc---------------------C-
Confidence 1124799999999 777 99999 699999987763 3 6788863322111 1
Q ss_pred ccccccccCCee-EEEEc-------CCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccC
Q psy4832 420 VRASNMDLGSLT-ALAFS-------PTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKE 491 (770)
Q Consensus 420 ~~a~~~~l~~P~-giavd-------~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d 491 (770)
..+..++|..|. +++++ ++|+|||||+.+|| ||+++++|.+++++|.+..+ .+. ..+..+..|
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~r---Ir~i~~~G~v~TiaG~g~~~----~~~--~~~~~G~~d 434 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFC---VRKVTPEGIVSTYAGRGAST----SLA--DGNQWGTDD 434 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTE---EEEECTTCBEEEEEESCTTH----HHH--HSCSCCCCC
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCCCE---EEEEeCCCCEEEEecccccc----ccc--CccccccCC
Confidence 245678899999 88987 68999999999986 78899999999999986310 000 000001135
Q ss_pred cccccceecCCeeEEEEcCC-CcEEEEcCCCceEEeeecCCc
Q psy4832 492 TLLTSTARFTSISALSVSPD-GVVNVADQGSLHILALQHYLP 532 (770)
Q Consensus 492 ~~~~~~~~l~~P~giav~~d-G~lyvaD~~~~~I~~i~~~~~ 532 (770)
+.++..++|+.|.|||++++ |.|||+|.+|+|||+|.....
T Consensus 435 G~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 435 GDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 55788999999999999996 999999999999999987654
No 3
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2.2e-28 Score=273.07 Aligned_cols=287 Identities=16% Similarity=0.153 Sum_probs=211.8
Q ss_pred CCCeEEEEec-----cCccCCccCCCCCccc-ccccccCceEEEEcC--CCCEEEEeC-ceEEEEcCCCc-EEEEeccCc
Q psy4832 149 FPRTVSVVMG-----TGLQRPLVCKDCDGVA-RDARLLTPVALTSGP--DGSLYVGDF-NLVRRLTPEGN-VFTVLQLSA 218 (770)
Q Consensus 149 ~~~~i~~v~g-----~G~~~~~~~~~~~g~~-~~~~l~~P~~la~~~--dG~lyv~d~-~~I~~i~~~G~-v~~~~~~~~ 218 (770)
.+..|++++| +|..+. ++|.. ..++|.+|.+|++|| +|+|||+|. ++|+++++++. +.+++.
T Consensus 105 ~~~~VsT~~G~~~~~~g~~g~-----~dG~~~~~~~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--- 176 (430)
T 3tc9_A 105 KKMLVTTFLGTMYDGNTKYDL-----KDGPFDDCGGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--- 176 (430)
T ss_dssp CCEEEEEEECCCBTTTTBCCB-----CCEEGGGCBCCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---
T ss_pred EEeEEEEeeeeEEccCCCccc-----cCCCHHHccCCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---
Confidence 6789999999 455442 45554 566899999999997 599999999 79999999875 445442
Q ss_pred ccccceeEEEEeCCCCcEEEEeCCCc----EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCc
Q psy4832 219 TQVSYQYYLALSPADGHLYISDAEKH----QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHP 294 (770)
Q Consensus 219 ~~~~~p~~lav~p~~g~lyvsd~~~~----~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P 294 (770)
.+..|.+|++++.++.|||+|..++ .+..+.. ++.+.. ......+..|
T Consensus 177 -~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-------~g~~~~--------------------~~~l~~~~~p 228 (430)
T 3tc9_A 177 -GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-------ESGFKV--------------------ITELTKGQNC 228 (430)
T ss_dssp -CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-------GGTSCS--------------------EEEEEECSSC
T ss_pred -CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-------CCceee--------------------eeeeccCCCc
Confidence 6788999999974444999998543 4555532 221110 0011246789
Q ss_pred ceEEEcc-CCcEEEEeCCC--eEEECCCCcEE-EeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEE
Q psy4832 295 KGLAIKA-DKTMFIADGTN--IRVVSPEGIIH-TLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFI 369 (770)
Q Consensus 295 ~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~-t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~ 369 (770)
.+|++++ +|.|||+|..+ |+++++++... .+...+ ...+|.+|+++| +|+ |||+
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--------------------~~~~P~gia~~p-dG~~lyv~ 287 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--------------------DSGWEFHIQFHP-SGNYAYIV 287 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--------------------SSSCCEEEEECT-TSSEEEEE
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--------------------CCCcceeEEEcC-CCCEEEEE
Confidence 9999999 89999999776 99999886543 433221 124799999999 777 9999
Q ss_pred e--CCEEEEEcCCCc------EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCee-EEEE-----
Q psy4832 370 D--DRVIFKLTNDLK------VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLT-ALAF----- 435 (770)
Q Consensus 370 D--~~~I~~i~~~G~------v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~-giav----- 435 (770)
| +++|++++.++. +.+++|.+...... ...+..+.|..|. ++++
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~----------------------dg~~~~a~~~~P~~gv~v~~~~y 345 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWV----------------------DGVGKKARMHAPRQGTFVKNPAY 345 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCB----------------------CEEGGGCBBSSEEEEEEEECGGG
T ss_pred ECCCCEEEEEeCCcccccccceEEEeccCCCCCCC----------------------CCCCcceEeCCCcceEEEccccc
Confidence 9 689999997753 45677753221110 1233566799999 8999
Q ss_pred ---cCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcC-C
Q psy4832 436 ---SPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSP-D 511 (770)
Q Consensus 436 ---d~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~-d 511 (770)
|++|+|||||+.++| |++++++|++++++|.+..+.. +..++.++..++|+.|.+||+++ +
T Consensus 346 ~~~D~~g~lyvaD~~n~~---I~~i~~~G~v~~~~g~g~~~~~------------G~~dG~~~~~~~~~~P~giavd~~~ 410 (430)
T 3tc9_A 346 KGSSDEYDFYFCDRENHC---IRILTPQGRVTTFAGRGSNGTS------------GYNDGDLRQEARFNHPEGIVYDEER 410 (430)
T ss_dssp TTSSCCEEEEEEEGGGTE---EEEECTTSEEEEEEECCTTSSS------------SCBCEETTTTCBCSSEEEEEEETTT
T ss_pred cccCCCCeEEEEECCCcE---EEEECCCCcEEEEEeCCCCCCC------------cccCCCchhhcEeCCCcEEEEECCC
Confidence 467999999999986 7888999999999987532210 01244467788999999999999 6
Q ss_pred CcEEEEcCCCceEEeeec
Q psy4832 512 GVVNVADQGSLHILALQH 529 (770)
Q Consensus 512 G~lyvaD~~~~~I~~i~~ 529 (770)
|.|||+|.+|+||++|..
T Consensus 411 g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 411 ECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TEEEEEEGGGTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEcc
Confidence 999999999999999865
No 4
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=1.7e-27 Score=264.46 Aligned_cols=297 Identities=14% Similarity=0.097 Sum_probs=221.9
Q ss_pred EEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcc
Q psy4832 143 LHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSAT 219 (770)
Q Consensus 143 ~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~ 219 (770)
.|..+ .+..|++++|++..+. .++|....++|..|.+|+++++|+|||+|. ++|++++++ |.+.+++..
T Consensus 99 ~F~y~-~~~~v~tv~G~~~~~~----~~dG~~~~a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--- 170 (409)
T 3hrp_A 99 TFKYE-QAQNVSTISGSASKDG----NDDGDLASAKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--- 170 (409)
T ss_dssp CEEEC-CCEEEEEEEECTTCCS----CCCBSTTTCCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---
T ss_pred eEEEe-cccEEEEeecccCCCc----cCCCcHHHcccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---
Confidence 34444 7789999999987663 356777788999999999999999999998 599999987 566666542
Q ss_pred cccceeEEEEeCCCCcEEEEeCCCc-EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEE
Q psy4832 220 QVSYQYYLALSPADGHLYISDAEKH-QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLA 298 (770)
Q Consensus 220 ~~~~p~~lav~p~~g~lyvsd~~~~-~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIa 298 (770)
...|. +++++.++.||+++...+ +|++++.... .....+ +. +. ...+..|.+|+
T Consensus 171 -~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-----~~~~~~-g~---~~--------------~~~~~~p~~ia 225 (409)
T 3hrp_A 171 -FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-----WAPTRI-GQ---LG--------------STFSGKIGAVA 225 (409)
T ss_dssp -CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-----TCEEEE-EE---CC--------------TTSCSCCCBCE
T ss_pred -CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC-----ceeEEe-ee---cc--------------chhcCCcEEEE
Confidence 45577 999987778999998654 9999964211 111121 10 00 01356799999
Q ss_pred Ecc-CCcEEEEeCCC-eEEECCCC-cEEEeecCCCCCCCcCCCccCCCcccccccccCcc-eEEEeCCCCeEEEEe--CC
Q psy4832 299 IKA-DKTMFIADGTN-IRVVSPEG-IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPT-GLALSPLDDSLHFID--DR 372 (770)
Q Consensus 299 vd~-~G~lYvaD~~~-Ir~id~~G-~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~-gla~d~~~g~lyv~D--~~ 372 (770)
+++ +|.||++|..+ |++++.++ .+..+.+...... .-..|. +|+++|.++.|||+| ++
T Consensus 226 v~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~----------------~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 226 LDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS----------------LGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp ECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC----------------CCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred EeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC----------------CCCCccccEEEeCCCCEEEEEeCCCC
Confidence 999 89999999866 99999864 4544433321110 011366 999999668999999 68
Q ss_pred EEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeC-CCCce
Q psy4832 373 VIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADI-DARKV 451 (770)
Q Consensus 373 ~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~-~~~ri 451 (770)
+|++++.+|.+.+++|.+..... . + ..+..+.|..|.+|+++++|+|||||. .+++
T Consensus 290 ~I~~~~~~g~~~~~~g~~~~~g~--~-------------------d-g~~~~~~~~~P~gia~d~dG~lyvad~~~~~~- 346 (409)
T 3hrp_A 290 SVYKITPDGECEWFCGSATQKTV--Q-------------------D-GLREEALFAQPNGMTVDEDGNFYIVDGFKGYC- 346 (409)
T ss_dssp EEEEECTTCCEEEEEECTTCCSC--B-------------------C-EEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-
T ss_pred EEEEEecCCCEEEEEeCCCCCCc--C-------------------C-CcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-
Confidence 99999999999999886522111 0 1 134567789999999999999999999 8875
Q ss_pred eeEEEEc-CCCcEEEeecCcc-CCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeec
Q psy4832 452 NALRVID-STGRMFDFAGRWQ-SDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 452 ~~i~~i~-~~G~i~~~aG~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~ 529 (770)
|++++ ++|.+++++|... .+. ..+.+..++|+.|.+||++++|.|||+|.++++|+++..
T Consensus 347 --I~~~~~~~G~v~~~~g~~~~~g~----------------~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 347 --LRKLDILDGYVSTVAGQVDVASQ----------------IDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp --EEEEETTTTEEEEEEECTTCBSC----------------CCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred --EEEEECCCCEEEEEeCCCCCCCc----------------CCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 78888 8999999998741 111 123456788999999999999999999999999999863
No 5
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.94 E-value=1.7e-24 Score=233.14 Aligned_cols=266 Identities=18% Similarity=0.240 Sum_probs=193.6
Q ss_pred cccccccCceEEEEcCCCCEEEEeC-c-------------------------eEEEEcCC-CcEEEEeccCcccccceeE
Q psy4832 174 ARDARLLTPVALTSGPDGSLYVGDF-N-------------------------LVRRLTPE-GNVFTVLQLSATQVSYQYY 226 (770)
Q Consensus 174 ~~~~~l~~P~~la~~~dG~lyv~d~-~-------------------------~I~~i~~~-G~v~~~~~~~~~~~~~p~~ 226 (770)
....+|..|.+|+++++|+|||++. + .|.+++++ |++...++ ...+..|.+
T Consensus 18 ~~~~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~p~g 95 (329)
T 3fvz_A 18 GVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KNLFYLPHG 95 (329)
T ss_dssp GGGCCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TTTCSSEEE
T ss_pred hhceecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CCccCCceE
Confidence 4467899999999999999999987 3 49999985 99887765 456789999
Q ss_pred EEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc--EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CC
Q psy4832 227 LALSPADGHLYISDAEKHQILRVLSLESVADPSIN--WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DK 303 (770)
Q Consensus 227 lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~--~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G 303 (770)
|+++| +|+|||+|..+++|+++ +++|. .....+... ..|. ....|..|.+|++++ +|
T Consensus 96 ia~d~-~g~l~v~d~~~~~v~~~-------~~~g~~~~~~~~~~~~--------~~g~----~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 96 LSIDT-DGNYWVTDVALHQVFKL-------DPHSKEGPLLILGRSM--------QPGS----DQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp EEECT-TSCEEEEETTTTEEEEE-------CTTCSSCCSEEESBTT--------BCCC----STTCCSSEEEEEECTTTC
T ss_pred EEECC-CCCEEEEECCCCEEEEE-------eCCCCeEEEEEecccC--------CCCC----CccccCCCcEEEEeCCCC
Confidence 99997 88899999999999999 55655 222222211 1111 124578999999999 89
Q ss_pred cEEEEeC-CC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCC-CeEEEEe--CCEEEEE
Q psy4832 304 TMFIADG-TN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLD-DSLHFID--DRVIFKL 377 (770)
Q Consensus 304 ~lYvaD~-~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~-g~lyv~D--~~~I~~i 377 (770)
+|||+|+ .+ |++++++|.+...++..... .......|..|.+|+++| + ++|||+| +++|+++
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~-----------~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSG-----------SSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCF 223 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCS-----------SSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCC-----------CCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEE
Confidence 9999996 44 99999999887776543221 112245788999999999 6 9999999 6899999
Q ss_pred cCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEE
Q psy4832 378 TND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRV 456 (770)
Q Consensus 378 ~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~ 456 (770)
+++ |++......+... .. .......| +++++.+|++||++..+++ |+.
T Consensus 224 ~~~~G~~~~~~~~~~~~-----~~----------------------~~~~~~~p-g~~~~~~g~~~v~~~~~~~---v~~ 272 (329)
T 3fvz_A 224 KTDTKEFVREIKHASFG-----RN----------------------VFAISYIP-GFLFAVNGKPYFGDQEPVQ---GFV 272 (329)
T ss_dssp ETTTCCEEEEECCTTTT-----TC----------------------EEEEEEET-TEEEEEECCCCTTCSCCCC---EEE
T ss_pred ECCCCcEEEEEeccccC-----CC----------------------cceeeecC-CEEEEeCCCEEeccCCCcE---EEE
Confidence 987 8865544322111 00 00001123 5555557888888887765 667
Q ss_pred Ec-CCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 457 ID-STGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 457 i~-~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
++ .+|++....+.. ...+..|.+|+++|+|.|||+|.++++|+++...
T Consensus 273 ~~~~~g~~~~~~~~~--------------------------~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPV--------------------------RKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EETTTCCEEEEECCS--------------------------SSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEcCCCeEEEEEcCC--------------------------CCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 76 577766655322 1346789999999999999999999999998654
No 6
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=5.8e-24 Score=237.05 Aligned_cols=283 Identities=14% Similarity=0.152 Sum_probs=198.1
Q ss_pred eeeecCCCeEEEC-CCccEEecccCCCeEEEEeccC-ccCCccCCCCCcccccccccCceEEEE-------cCCCC-EEE
Q psy4832 126 HHYNFHEGILQKG-DGSSLHLKHEFPRTVSVVMGTG-LQRPLVCKDCDGVARDARLLTPVALTS-------GPDGS-LYV 195 (770)
Q Consensus 126 ~~~~~~~gil~~~-dG~~~~~~~~~~~~i~~v~g~G-~~~~~~~~~~~g~~~~~~l~~P~~la~-------~~dG~-lyv 195 (770)
..|..|.++..++ ++.+||+++.....|.++.-.+ ....+. .. ....+.+|.+|++ +++|. |||
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~---~~---~~~~~~~p~~ia~~~~~~~~d~~G~~lyv 209 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPL---NI---NTIPTNRIRSIAFNKKIEGYADEAEYMIV 209 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEE---CC---TTSSCSBEEEEEECCCBTTTBCTTCEEEE
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEE---cc---CccccCCCcEEEEeecccccCCCCCEEEE
Confidence 4577899999997 5668999885566777776433 322221 01 1135788999999 99998 999
Q ss_pred EeCc--------eEEEEc--CCCcEE-----EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc-------C
Q psy4832 196 GDFN--------LVRRLT--PEGNVF-----TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL-------E 253 (770)
Q Consensus 196 ~d~~--------~I~~i~--~~G~v~-----~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~-------~ 253 (770)
+|.+ .|.+++ .+|.+. ..+ ..+.+|.+++++|.++.||++|..+++|++++.. +
T Consensus 210 ad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v----~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t 285 (496)
T 3kya_A 210 AIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI----AAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN 285 (496)
T ss_dssp EECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE----EEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT
T ss_pred EeCCCCCcccCceEEEEecCCCCceeecccceee----ccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC
Confidence 9873 277774 445653 222 1467899999999899999999999999999653 1
Q ss_pred Ccc-CC-----CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECCCCc---
Q psy4832 254 SVA-DP-----SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPEGI--- 321 (770)
Q Consensus 254 ~~~-~~-----~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~G~--- 321 (770)
... .+ .|....++.. ..-..|.+|+++++|+ |||+|+.+ |++++.++.
T Consensus 286 g~~~tp~~~~~~g~~~~l~~~--------------------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~ 345 (496)
T 3kya_A 286 GGSWDPIVKNNPNTFKQLFTI--------------------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKE 345 (496)
T ss_dssp TCCCCCBGGGCTTTEEEEEEC--------------------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred ceeecccccccccccceeEec--------------------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcce
Confidence 100 00 0001111110 0123689999999998 89999877 999887653
Q ss_pred E---EEeecC-CCCCCCcCCCccCCCcccccccccCcc-eEEEe-------CCCCeEEEEe--CCEEEEEcCCCcEEEEe
Q psy4832 322 I---HTLIGH-HKHHNIWSPFNCHRSFPASTAQLQWPT-GLALS-------PLDDSLHFID--DRVIFKLTNDLKVKIVA 387 (770)
Q Consensus 322 i---~t~~g~-~~~~~~~~p~~~~~~~~~~~~~l~~P~-gla~d-------~~~g~lyv~D--~~~I~~i~~~G~v~~va 387 (770)
+ .+++|. +..+ +. .+++..++|++|. +++++ + +|+|||+| +|+|++|+++|.+++++
T Consensus 346 ~~~~~~~aG~~g~~G-------~~-DG~~~~a~f~~P~~gv~vd~~~~~~~~-~g~lyVaD~~N~rIr~i~~~G~v~Tia 416 (496)
T 3kya_A 346 FITPYNFVGGYKQSG-------YR-DDVGTEARMNNPCQGVFVKNPDYTGEE-EYDFYFVDRLNFCVRKVTPEGIVSTYA 416 (496)
T ss_dssp ECCCEEEEEBTTBCC-------CB-CCBGGGCBCSSEEEEEEEECTTCCSSC-CEEEEEEEGGGTEEEEECTTCBEEEEE
T ss_pred ecccEEecCCCCCCc-------cc-CCcccccccCCCeEEEEEccccccccC-CCeEEEEECCCCEEEEEeCCCCEEEEe
Confidence 3 577876 2221 12 2577889999999 88887 5 78999999 79999999999999999
Q ss_pred cCCCCC-----C-CCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCC-CCEEEEeCCCCceeeEEEEcCC
Q psy4832 388 GIPLHC-----R-TGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPT-GDLYIADIDARKVNALRVIDST 460 (770)
Q Consensus 388 G~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i~~i~~~ 460 (770)
|.+..+ . .+.. ++..+..++|..|.||+++++ |+|||||+.|+| ||+++.+
T Consensus 417 G~g~~~~~~~~~~~G~~-------------------dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r---Irki~~~ 474 (496)
T 3kya_A 417 GRGASTSLADGNQWGTD-------------------DGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT---IRTISME 474 (496)
T ss_dssp ESCTTHHHHHSCSCCCC-------------------CEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE---EEEEEEC
T ss_pred cccccccccCccccccC-------------------CCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE---EEEEECC
Confidence 975431 0 0100 223467788999999999996 999999999986 7888888
Q ss_pred CcEEEeecCc
Q psy4832 461 GRMFDFAGRW 470 (770)
Q Consensus 461 G~i~~~aG~~ 470 (770)
+.+ .++|.+
T Consensus 475 ~~~-~~~~~~ 483 (496)
T 3kya_A 475 QEE-NVAGDE 483 (496)
T ss_dssp CCC-------
T ss_pred CCc-ccccCC
Confidence 876 334443
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.93 E-value=3.1e-24 Score=239.47 Aligned_cols=283 Identities=16% Similarity=0.094 Sum_probs=201.9
Q ss_pred EEEeecccccccCCCCCc---cceeeeeecCCCeEEECC--CccEEecccCCCeEEEEec-cCccCCccCCCCCcccccc
Q psy4832 104 TCTLQGFDVDISDIGGWS---LDVHHHYNFHEGILQKGD--GSSLHLKHEFPRTVSVVMG-TGLQRPLVCKDCDGVARDA 177 (770)
Q Consensus 104 ~~~l~g~~~~~~~~ggw~---l~~~~~~~~~~gil~~~d--G~~~~~~~~~~~~i~~v~g-~G~~~~~~~~~~~g~~~~~ 177 (770)
..++.|...+.....+|. ++....|+.|.|++.+.+ ..+||+++.. +.|.++.. +|....+ ..
T Consensus 111 VsTv~G~~~~~~g~~~~~dG~~~~a~~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~----------~~ 179 (433)
T 4hw6_A 111 VTTFLGKLYENNTKWDVLAGPFDDCGAFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIK----------TT 179 (433)
T ss_dssp EEEEECCCBTTTTBCCCCCEETTSCCCCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEE----------CC
T ss_pred EeeeecceeccCCCccccCCchHHhcccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEe----------ec
Confidence 357888322222222332 223347899999999974 4479999844 78888875 4444322 12
Q ss_pred cccCceEEEEcCCCCEEEEeCc------eEEEEcCCCcEE--EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 178 RLLTPVALTSGPDGSLYVGDFN------LVRRLTPEGNVF--TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 178 ~l~~P~~la~~~dG~lyv~d~~------~I~~i~~~G~v~--~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
.+..|.+|+++++|+|||+|.. .+..+++++... ..+ ..+..|.+++++|.+|.|||+|..+++|+++
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~----~~~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSL----CNARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEE----EECSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccc----cccCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 6778999999999999999972 366666554432 122 2578899999998899999999999999999
Q ss_pred eccCCccCCC-CcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECCC---Cc
Q psy4832 250 LSLESVADPS-INW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPE---GI 321 (770)
Q Consensus 250 ~~~~~~~~~~-g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~---G~ 321 (770)
+++ |.+ ..+...+. ...|.+|+++++|+ |||+|..+ |++++.+ +.
T Consensus 256 -------d~~~g~~~~~~~~~~~--------------------~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 256 -------DPATGTLTEEEVMMDT--------------------KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK 308 (433)
T ss_dssp -------CTTTCCEEEEEEECSC--------------------CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred -------ECCCCeEEEEEeccCC--------------------CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence 454 665 34432211 11356899999998 99999876 9998765 32
Q ss_pred ---EEEeecC-CCCCCCcCCCccCCCcccccccccCcceEEE---------eCCCCeEEEEe--CCEEEEEcCCCcEEEE
Q psy4832 322 ---IHTLIGH-HKHHNIWSPFNCHRSFPASTAQLQWPTGLAL---------SPLDDSLHFID--DRVIFKLTNDLKVKIV 386 (770)
Q Consensus 322 ---i~t~~g~-~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~---------d~~~g~lyv~D--~~~I~~i~~~G~v~~v 386 (770)
+.+++|. +..+ | ..+....++|.+|.+|++ ++ +|+|||+| +++|++++++|.++++
T Consensus 309 ~~~~~~~ag~~g~~g--~------~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~~G~v~t~ 379 (433)
T 4hw6_A 309 LAVPYIVCGQHSSPG--W------VDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTPEGRVTTY 379 (433)
T ss_dssp BCCCEEEEECTTCCC--C------BCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECTTSEEEEE
T ss_pred cCcEEEEEecCCCCc--c------CCCcccceEEcCCccEEEEccccccccCC-CCcEEEEECCCCEEEEECCCCCEEEE
Confidence 3567775 2211 1 134556788999999999 77 89999999 6999999999999999
Q ss_pred ecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEc-CCCCEEEEeCCCCceeeEEEEcC
Q psy4832 387 AGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFS-PTGDLYIADIDARKVNALRVIDS 459 (770)
Q Consensus 387 aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd-~~G~lyVaD~~~~ri~~i~~i~~ 459 (770)
+|.+..+..+.. ++..+..+.|..|.+||++ ++|+|||||..|+| ||++++
T Consensus 380 ~G~g~~~~~G~~-------------------dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r---Ir~i~~ 431 (433)
T 4hw6_A 380 AGRGNSREWGYV-------------------DGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHR---VRKIAP 431 (433)
T ss_dssp ECCCTTCSSCCB-------------------CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE---EEEEEE
T ss_pred EeCCCCCccccC-------------------CCccccccEeCCCcEEEEECCCCEEEEEeCCCCE---EEEEec
Confidence 998653222211 1224466789999999999 79999999999987 566654
No 8
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.93 E-value=1.8e-23 Score=243.14 Aligned_cols=344 Identities=16% Similarity=0.157 Sum_probs=237.7
Q ss_pred eecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcC-CCCEEEEeC---ceEEE
Q psy4832 128 YNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGP-DGSLYVGDF---NLVRR 203 (770)
Q Consensus 128 ~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~-dG~lyv~d~---~~I~~ 203 (770)
+..|+|++++..+.++|+++...+.|.++.-+|..+.. .....|..|.+|++|| +|.|||+|. .+|.|
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~--------l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r 154 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--------LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 154 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--------EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEE--------EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEE
Confidence 34699999999888999999888899999877765421 1125688999999999 588999996 49999
Q ss_pred EcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc---------c---------------CC-
Q psy4832 204 LTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV---------A---------------DP- 258 (770)
Q Consensus 204 i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~---------~---------------~~- 258 (770)
.+++|+..+++. ...+.+|+||++|+.++.|||+|..+++|++++..+.. . |.
T Consensus 155 ~~~dG~~~~~l~--~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~ 232 (619)
T 3s94_A 155 AGMDGSSRFIII--NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWS 232 (619)
T ss_dssp EETTSCSCEEEE--CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTT
T ss_pred EECCCCceEEEE--eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCC
Confidence 999998665543 34688999999999899999999999999988654420 0 00
Q ss_pred CCcEEE-----------EECC------------------Cccc------------------------cCCC-----CCCc
Q psy4832 259 SINWEV-----------AVGS------------------GERC------------------------IPGD-----ETNC 280 (770)
Q Consensus 259 ~g~~~~-----------vaG~------------------g~~~------------------------~p~~-----~~~~ 280 (770)
++.+.. +... ...| .+++ ...|
T Consensus 233 ~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C 312 (619)
T 3s94_A 233 THSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTC 312 (619)
T ss_dssp TCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCB
T ss_pred CCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCccc
Confidence 001111 0000 0011 1111 0111
Q ss_pred CCCcc-------------------------cccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCC-cEEEeecCCCC
Q psy4832 281 GDNGP-------------------------ALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEG-IIHTLIGHHKH 331 (770)
Q Consensus 281 g~~g~-------------------------~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G-~i~t~~g~~~~ 331 (770)
-++.. .....+..|.+|++|+ ++.||++|..+ |++++++| ...+++..
T Consensus 313 ~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~--- 389 (619)
T 3s94_A 313 KDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA--- 389 (619)
T ss_dssp CSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---
T ss_pred CCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC---
Confidence 11000 0001256788999997 78899999765 99999887 33444421
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
.+..|.|||+|+.+++||++| +++|.+++.+|....+..
T Consensus 390 ------------------~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~--------------------- 430 (619)
T 3s94_A 390 ------------------QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI--------------------- 430 (619)
T ss_dssp ------------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---------------------
T ss_pred ------------------CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE---------------------
Confidence 366899999998789999999 589999998887443331
Q ss_pred cccccccCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccC
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKN 488 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~ 488 (770)
...|..|.+||+|| .|.|||+|++.. .+|.+.+.+|........
T Consensus 431 --------------~~~l~~P~~iavdp~~G~ly~tD~g~~--~~I~r~~~dG~~~~~l~~------------------- 475 (619)
T 3s94_A 431 --------------SEDLEEPRAIVLDPMVGYMYWTDWGEI--PKIERAALDGSDRVVLVN------------------- 475 (619)
T ss_dssp --------------CTTCCSEEEEEEETTTTEEEEEECSSS--CEEEEEETTSCSCEEEEC-------------------
T ss_pred --------------ECCCCCeeeEEEEcCCCcEEEecCCCC--CEEEEEccCCCccEEEEe-------------------
Confidence 12367899999998 599999998763 257888888863332211
Q ss_pred ccCcccccceecCCeeEEEEcC-CCcEEEEcCCCceEEeeecCCcccC------CCCcEEEeCCCCCcEEEEecCCceEE
Q psy4832 489 SKETLLTSTARFTSISALSVSP-DGVVNVADQGSLHILALQHYLPTHD------EHGEFKIPYPATNEIYVFNRYGQHIT 561 (770)
Q Consensus 489 ~~d~~~~~~~~l~~P~giav~~-dG~lyvaD~~~~~I~~i~~~~~~~~------~~g~~~i~~~~~~e~yvfd~~G~~~~ 561 (770)
..|..|.|||+|+ ++.||++|..+++|.++........ ....+.++.. .+.+|+.|...+.+.
T Consensus 476 ---------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~-~~~ly~tD~~~~~I~ 545 (619)
T 3s94_A 476 ---------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLL-GDYVYWTDWQRRSIE 545 (619)
T ss_dssp ---------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEE-TTEEEEECTTSSCEE
T ss_pred ---------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEE-CCEEEEeecCCCeEE
Confidence 1267899999997 6799999999999999976543110 1122333332 337888887777777
Q ss_pred EEcCCCC
Q psy4832 562 TRDMTSG 568 (770)
Q Consensus 562 t~d~~tg 568 (770)
..+..++
T Consensus 546 ~~~k~~g 552 (619)
T 3s94_A 546 RVHKRSA 552 (619)
T ss_dssp EEESSSC
T ss_pred EEEcCCC
Confidence 7777766
No 9
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=1.3e-23 Score=234.53 Aligned_cols=269 Identities=14% Similarity=0.103 Sum_probs=195.0
Q ss_pred ccceeeeeecCCCeEEEC-CCccEEecccCCCeEEEEeccCcc-CCccCCCCCcccccccccCceEEEEcCCCC-EEEEe
Q psy4832 121 SLDVHHHYNFHEGILQKG-DGSSLHLKHEFPRTVSVVMGTGLQ-RPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGD 197 (770)
Q Consensus 121 ~l~~~~~~~~~~gil~~~-dG~~~~~~~~~~~~i~~v~g~G~~-~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d 197 (770)
.++.-..|+.|.+++.++ ++.++|+++.. ..|.++...+.. ..+ ...+..|.+|+++++|+ |||+|
T Consensus 129 ~~~~~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~----------~~~~~~P~~ia~d~~G~~lyvad 197 (430)
T 3tc9_A 129 PFDDCGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTV----------YSGLSKVRTICWTHEADSMIITN 197 (430)
T ss_dssp EGGGCBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEE----------ECCCSCEEEEEECTTSSEEEEEE
T ss_pred CHHHccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEE----------ecCCCCcceEEEeCCCCEEEEEe
Confidence 344445688999999996 45579999844 777777655432 211 12567899999999998 99999
Q ss_pred Cc------eEEEEcCCCcEE--EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEE-EEECC
Q psy4832 198 FN------LVRRLTPEGNVF--TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWE-VAVGS 268 (770)
Q Consensus 198 ~~------~I~~i~~~G~v~--~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~-~vaG~ 268 (770)
.+ .+..++++|.+. ..+ ..+.+|.+++++|.+|.|||+|..+++|++++ +++... .+...
T Consensus 198 ~~~~~~~~~v~~~~~~g~~~~~~~l----~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~-------~~~~~~~~~~~~ 266 (430)
T 3tc9_A 198 DQNNNDRPNNYILTRESGFKVITEL----TKGQNCNGAETHPINGELYFNSWNAGQVFRYD-------FTTQETTPLFTI 266 (430)
T ss_dssp CCSCTTSEEEEEEEGGGTSCSEEEE----EECSSCCCEEECTTTCCEEEEETTTTEEEEEE-------TTTTEEEEEEEC
T ss_pred CCCCcccceEEEEeCCCceeeeeee----ccCCCceEEEEeCCCCEEEEEECCCCEEEEEE-------CCCCcEEEEEEc
Confidence 72 577788877654 222 24788999999988999999999999999994 444332 33221
Q ss_pred CccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECCCCc------EEEeecCCCCCCCcCCCc
Q psy4832 269 GERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPEGI------IHTLIGHHKHHNIWSPFN 339 (770)
Q Consensus 269 g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~G~------i~t~~g~~~~~~~~~p~~ 339 (770)
+. ...|.+|+++++|+ |||+|..+ |++++.++. +.+++|...... |
T Consensus 267 ~~--------------------~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g-~---- 321 (430)
T 3tc9_A 267 QD--------------------SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKD-W---- 321 (430)
T ss_dssp SS--------------------SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBC-C----
T ss_pred CC--------------------CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCC-C----
Confidence 10 23699999999998 99999876 999887753 456776522110 1
Q ss_pred cCCCcccccccccCcc-eEEEeC-------CCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccc
Q psy4832 340 CHRSFPASTAQLQWPT-GLALSP-------LDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 340 ~~~~~~~~~~~l~~P~-gla~d~-------~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
.......++|..|. ++++++ .+|+|||+| +++|++++++|++++++|.+..+..+..
T Consensus 322 --~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~----------- 388 (430)
T 3tc9_A 322 --VDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYN----------- 388 (430)
T ss_dssp --BCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCB-----------
T ss_pred --CCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCccc-----------
Confidence 12345567899999 899953 168999999 6999999999999999987542221110
Q ss_pred cccccccCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCC
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDST 460 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~ 460 (770)
++..+..++|..|.+|++++ +|.|||||..++| ||+++++
T Consensus 389 --------dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r---Ir~i~~e 429 (430)
T 3tc9_A 389 --------DGDLRQEARFNHPEGIVYDEERECFFIGDRENRR---IRKIGYE 429 (430)
T ss_dssp --------CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE---EEEEEEC
T ss_pred --------CCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe---EEEEccC
Confidence 11234567899999999999 6999999999986 5666543
No 10
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.92 E-value=6.5e-21 Score=221.65 Aligned_cols=304 Identities=17% Similarity=0.176 Sum_probs=202.3
Q ss_pred cccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcE--EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 176 DARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNV--FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 176 ~~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v--~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
...+..|.+|++++ +|.|||+|. ++|+|++.+|.. .+++ ..++..|.|||+|+.+++|||+|..+++|.++
T Consensus 36 ~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~---~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~- 111 (619)
T 3s94_A 36 VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV---VSGLLSPDGLACDWLGEKLYWTDSETNRIEVS- 111 (619)
T ss_dssp CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEE-
T ss_pred EcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE---eCCCCCcCeEEEEecCCEEEEEeCCCCEEEEE-
Confidence 45678899999998 788999998 599999999873 3454 34678899999998899999999999999999
Q ss_pred ccCCccCCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEEe
Q psy4832 251 SLESVADPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHTL 325 (770)
Q Consensus 251 ~~~~~~~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t~ 325 (770)
+.+|... ++.. ..+..|.+||+|+ +|.|||+|.+. |.+.+.+|...+.
T Consensus 112 ------~~dG~~~~~l~~---------------------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~ 164 (619)
T 3s94_A 112 ------NLDGSLRKVLFW---------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 164 (619)
T ss_dssp ------ETTSCSCEEEEC---------------------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred ------ECCCCCEEEEEe---------------------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE
Confidence 4556532 3321 2266899999998 58899999763 9999999854333
Q ss_pred ecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccc
Q psy4832 326 IGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDF 403 (770)
Q Consensus 326 ~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~ 403 (770)
+.. ..+.+|.||++|+.++.|||+| +++|++++.+|........
T Consensus 165 l~~--------------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-------------- 210 (619)
T 3s94_A 165 IIN--------------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-------------- 210 (619)
T ss_dssp EEC--------------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------
T ss_pred EEe--------------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe--------------
Confidence 322 1377999999998778999999 5899999999864433211
Q ss_pred cccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCc-EEEeecC-------------
Q psy4832 404 KDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGR-MFDFAGR------------- 469 (770)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~-i~~~aG~------------- 469 (770)
..+..|.||+++.+ .|||+|+.+++|.++.+. +|+ +..+...
T Consensus 211 ---------------------~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~--tg~~~~~i~~~~~~p~~i~v~~~~ 266 (619)
T 3s94_A 211 ---------------------GSLPHPFALTLFED-ILYWTDWSTHSILACNKY--TGEGLREIHSDIFSPMDIHAFSQQ 266 (619)
T ss_dssp --------------------------CCCEEESSS-EEEEECTTTCSEEEEESS--SCCCCEECCSCCCCCSEEEECCGG
T ss_pred ---------------------CCCCCceEEEEeCC-EEEEecCCCCEEEEEECC--CCcccEEEecCCCCCcEEEEEccc
Confidence 12467999999876 899999999876555432 332 1222111
Q ss_pred -ccCCCCCcC-----CC------------CCcccccCcc--C---------c----------------------ccccce
Q psy4832 470 -WQSDKKNCN-----TT------------NCAEFEKNSK--E---------T----------------------LLTSTA 498 (770)
Q Consensus 470 -~~~~~~~~~-----~~------------~~~~~~~~~~--d---------~----------------------~~~~~~ 498 (770)
...+...|. |. .|.|..+..- | . ......
T Consensus 267 ~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~ 346 (619)
T 3s94_A 267 RQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLE 346 (619)
T ss_dssp GSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCS
T ss_pred cCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEecc
Confidence 001223442 21 1444332100 0 0 000012
Q ss_pred ecCCeeEEEEcC-CCcEEEEcCCCceEEeeecCCccc----C-C-CCcEEEeCC-CCCcEEEEecCCceEEEEcCCCC
Q psy4832 499 RFTSISALSVSP-DGVVNVADQGSLHILALQHYLPTH----D-E-HGEFKIPYP-ATNEIYVFNRYGQHITTRDMTSG 568 (770)
Q Consensus 499 ~l~~P~giav~~-dG~lyvaD~~~~~I~~i~~~~~~~----~-~-~g~~~i~~~-~~~e~yvfd~~G~~~~t~d~~tg 568 (770)
.+..|.+|++++ +|.||++|..+++|+++....... . . .....++.+ .++.+|+.|.....+...++.+.
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 367899999998 789999999999999997754211 1 1 123344444 46778888877777777766554
No 11
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.91 E-value=1.2e-20 Score=219.63 Aligned_cols=191 Identities=19% Similarity=0.182 Sum_probs=147.1
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCc-EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGN-VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~-v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
..+..|.+|++|+ +|.|||+|. ++|++++++|. +.+++ ..++..|.|||+|+.+++|||+|..+++|.+++
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~---~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~-- 108 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV---EFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSK-- 108 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE--
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE---eCCCCCcceEEEEeCCCEEEEEECCCCEEEEEe--
Confidence 3577899999998 789999997 59999999885 44555 345678999999988999999999999999994
Q ss_pred CCccCCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCC-C--eEEECCCCcEEEeec
Q psy4832 253 ESVADPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGT-N--IRVVSPEGIIHTLIG 327 (770)
Q Consensus 253 ~~~~~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~-~--Ir~id~~G~i~t~~g 327 (770)
++|... ++.. ..+..|.+||+|| +|.||++|.+ + |.+++.+|...+.+.
T Consensus 109 -----~dG~~~~~l~~---------------------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~ 162 (628)
T 4a0p_A 109 -----LDGQHRQVLVW---------------------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV 162 (628)
T ss_dssp -----TTSTTCEEEEC---------------------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred -----cCCCcEEEEEe---------------------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE
Confidence 455432 2221 2266899999997 7999999965 3 999999885333332
Q ss_pred CCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccc
Q psy4832 328 HHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKD 405 (770)
Q Consensus 328 ~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~ 405 (770)
. .+.+|.||++|+.++.|||+| +++|.+++.+|....+..
T Consensus 163 ~---------------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~----------------- 204 (628)
T 4a0p_A 163 P---------------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA----------------- 204 (628)
T ss_dssp C---------------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----------------
T ss_pred C---------------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee-----------------
Confidence 1 267999999999678999999 589999998874222221
Q ss_pred cccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEE
Q psy4832 406 KQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRV 456 (770)
Q Consensus 406 ~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~ 456 (770)
..+..|.||+++. +.|||+|+.+++|.++.+
T Consensus 205 -------------------~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 205 -------------------DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp -------------------ECCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred -------------------ccCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 1256799999986 789999999987544443
No 12
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.91 E-value=7.1e-22 Score=229.91 Aligned_cols=353 Identities=19% Similarity=0.176 Sum_probs=239.6
Q ss_pred eecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcC-CCCEEEEeC---ceEEE
Q psy4832 128 YNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGP-DGSLYVGDF---NLVRR 203 (770)
Q Consensus 128 ~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~-dG~lyv~d~---~~I~~ 203 (770)
+..|+|++++..+.++|+++.....|.++.-+|..+.. .....|..|.+|++|| +|.|||+|. .+|.+
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~--------l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV--------LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDR 150 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE--------EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE--------EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEE
Confidence 35799999999988999999788899998877765421 1125678999999998 899999995 49999
Q ss_pred EcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc-----------------------c----
Q psy4832 204 LTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV-----------------------A---- 256 (770)
Q Consensus 204 i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~-----------------------~---- 256 (770)
++++|...+++. ..+.+|.+|++|+.++.|||+|..+++|.+++..+.. .
T Consensus 151 ~~~dG~~~~~l~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~ 227 (628)
T 4a0p_A 151 AAMDGSERTTLV---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSR 227 (628)
T ss_dssp EETTSCSCEEEE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTT
T ss_pred EeCCCCceEEEE---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCC
Confidence 999998665552 3688999999998889999999999888888754320 0
Q ss_pred ------C-CCC-cEEEEECC-----------------Cccc-----------------------cCCCC-----CCcCC-
Q psy4832 257 ------D-PSI-NWEVAVGS-----------------GERC-----------------------IPGDE-----TNCGD- 282 (770)
Q Consensus 257 ------~-~~g-~~~~vaG~-----------------g~~~-----------------------~p~~~-----~~~g~- 282 (770)
+ .+| +.+++... -..| .+++. ..|-.
T Consensus 228 ~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 228 RSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp TEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred CEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 0 011 11111110 0011 11110 01100
Q ss_pred ------------------Cc-----ccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCc-EEEeecCCCCCCCc
Q psy4832 283 ------------------NG-----PALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGI-IHTLIGHHKHHNIW 335 (770)
Q Consensus 283 ------------------~g-----~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~-i~t~~g~~~~~~~~ 335 (770)
.. ......+..+.+|++|+ ++.||++|..+ |++++.+|. ..+++.....
T Consensus 308 ~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~---- 383 (628)
T 4a0p_A 308 TTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVP---- 383 (628)
T ss_dssp SSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------
T ss_pred cceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccc----
Confidence 00 00012345577899987 67899999866 999988873 2333321000
Q ss_pred CCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccc
Q psy4832 336 SPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKS 413 (770)
Q Consensus 336 ~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (770)
....+..|.|||+|+..++|||+| +++|.+++.+|+...+...
T Consensus 384 -----------~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~------------------------ 428 (628)
T 4a0p_A 384 -----------SQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLK------------------------ 428 (628)
T ss_dssp ---------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEE------------------------
T ss_pred -----------cccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEe------------------------
Confidence 012367899999999778999999 5899999999986544311
Q ss_pred cccCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCc
Q psy4832 414 TVQDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKET 492 (770)
Q Consensus 414 ~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~ 492 (770)
..+..|.+||++| .|.|||+|++.+. -+|.+.+.+|.........
T Consensus 429 -----------~~l~~Pr~iavdp~~g~ly~tD~g~~~-~~I~r~~~dG~~~~~l~~~---------------------- 474 (628)
T 4a0p_A 429 -----------GEQDRPRAVVVNPEKGYMYFTNLQERS-PKIERAALDGTEREVLFFS---------------------- 474 (628)
T ss_dssp -----------CTTCCEEEEEEETTTTEEEEEEEETTE-EEEEEEETTSCSCEEEECS----------------------
T ss_pred -----------CCCCceeeEEEecCCCeEEEeecCCCC-CeEEEEeCCCCCcEEEEec----------------------
Confidence 1256799999999 8999999998762 1577888888643322111
Q ss_pred ccccceecCCeeEEEEcCC-CcEEEEcCCCceEEeeecCCccc---C---CCCcEEEeCCCCCcEEEEecCCceEEEEcC
Q psy4832 493 LLTSTARFTSISALSVSPD-GVVNVADQGSLHILALQHYLPTH---D---EHGEFKIPYPATNEIYVFNRYGQHITTRDM 565 (770)
Q Consensus 493 ~~~~~~~l~~P~giav~~d-G~lyvaD~~~~~I~~i~~~~~~~---~---~~g~~~i~~~~~~e~yvfd~~G~~~~t~d~ 565 (770)
.+..|.||++|++ +.||++|..+++|.++....... . ....+.++... +.+|+.|...+.+...+.
T Consensus 475 ------~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 475 ------GLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp ------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred ------cCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEEC
Confidence 2678999999985 79999999999999987644211 0 12345555444 688888887777777777
Q ss_pred CCCCcE
Q psy4832 566 TSGKPR 571 (770)
Q Consensus 566 ~tg~~~ 571 (770)
.+|...
T Consensus 548 ~~G~~~ 553 (628)
T 4a0p_A 548 TGREGR 553 (628)
T ss_dssp TSSSCC
T ss_pred cCCCCc
Confidence 766543
No 13
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.91 E-value=2.1e-21 Score=203.68 Aligned_cols=243 Identities=14% Similarity=0.266 Sum_probs=184.1
Q ss_pred cccccCceEEEEcCCCCEEEEeC--ceEEEEcCCCcEEEEeccC---cccccceeEEEEeCCCCcEEEEeCC-CcEEEEE
Q psy4832 176 DARLLTPVALTSGPDGSLYVGDF--NLVRRLTPEGNVFTVLQLS---ATQVSYQYYLALSPADGHLYISDAE-KHQILRV 249 (770)
Q Consensus 176 ~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v~~~~~~~---~~~~~~p~~lav~p~~g~lyvsd~~-~~~I~~i 249 (770)
...|..|.+|+++++|+|||++. ++|++++++|+....+... ...+..|.+|++++.++.|||++.. +++|+++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 46788999999999999999986 5899999999887766431 2356789999996558999999975 7899999
Q ss_pred eccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeec
Q psy4832 250 LSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIG 327 (770)
Q Consensus 250 ~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g 327 (770)
+++|......+. ..+..|.+|+++++|+|||++..+ |++++++|.+...++
T Consensus 106 -------d~~g~~~~~~~~--------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 158 (286)
T 1q7f_A 106 -------NQYGQFVRKFGA--------------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFG 158 (286)
T ss_dssp -------CTTSCEEEEECT--------------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred -------CCCCcEEEEecC--------------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeC
Confidence 556665443321 124579999999999999999754 999999987665553
Q ss_pred CCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccc
Q psy4832 328 HHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKD 405 (770)
Q Consensus 328 ~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~ 405 (770)
.. ..+..|.+|++++ +|+|||++ +++|++++++|......+..
T Consensus 159 ~~-------------------~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------------- 203 (286)
T 1q7f_A 159 CS-------------------KHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYEGQYLRQIGGE--------------- 203 (286)
T ss_dssp CT-------------------TTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETTCCEEEEESCT---------------
T ss_pred CC-------------------CccCCcEEEEECC-CCCEEEEECCCCEEEEEcCCCCEEEEEccC---------------
Confidence 31 1356799999999 99999999 68999999988754333211
Q ss_pred cccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCccc
Q psy4832 406 KQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEF 485 (770)
Q Consensus 406 ~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~ 485 (770)
..+..|.+|++|++|+|||++..++. +|++++++|+........
T Consensus 204 -------------------g~~~~p~~i~~d~~G~l~v~~~~~~~--~i~~~~~~g~~~~~~~~~--------------- 247 (286)
T 1q7f_A 204 -------------------GITNYPIGVGINSNGEILIADNHNNF--NLTIFTQDGQLISALESK--------------- 247 (286)
T ss_dssp -------------------TTSCSEEEEEECTTCCEEEEECSSSC--EEEEECTTSCEEEEEEES---------------
T ss_pred -------------------CccCCCcEEEECCCCCEEEEeCCCCE--EEEEECCCCCEEEEEccc---------------
Confidence 11456999999999999999988751 377888888754332111
Q ss_pred ccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeec
Q psy4832 486 EKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 486 ~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~ 529 (770)
.....|.+|+++|+|.|||++. +++|+.++.
T Consensus 248 ------------~~~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 248 ------------VKHAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp ------------SCCSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred ------------CCCCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 0124589999999999999975 677776654
No 14
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.90 E-value=1.1e-20 Score=198.45 Aligned_cols=273 Identities=14% Similarity=0.166 Sum_probs=205.6
Q ss_pred ecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC--ceEEEEcC
Q psy4832 129 NFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF--NLVRRLTP 206 (770)
Q Consensus 129 ~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~ 206 (770)
..|.++..+.+| ++|+++...+.|..+...|....+. ....+..|.+|+++++|+|||++. ++|.++++
T Consensus 20 ~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 20 SGPYGITSSEDG-KVWFTQHKANKISSLDQSGRIKEFE--------VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTSCEEEEE--------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCcceeeECCCC-CEEEEcCCCCeEEEECCCCceEEEE--------CCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 456788888888 4788775667888887654432211 123457899999999999999997 58999999
Q ss_pred CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCccc
Q psy4832 207 EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPA 286 (770)
Q Consensus 207 ~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~ 286 (770)
+|++..+.. ......|.+|++++ +|.|||++..++.|.++ ++++.+..+.-.
T Consensus 91 ~g~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~-------~~~g~~~~~~~~------------------ 142 (300)
T 2qc5_A 91 KGGFTEYPL--PQPDSGPYGITEGL-NGDIWFTQLNGDRIGKL-------TADGTIYEYDLP------------------ 142 (300)
T ss_dssp TSCEEEEEC--SSTTCCEEEEEECS-TTCEEEEETTTTEEEEE-------CTTSCEEEEECS------------------
T ss_pred CCCeEEecC--CCCCCCCccceECC-CCCEEEEccCCCeEEEE-------CCCCCEEEccCC------------------
Confidence 988765432 12346799999996 89999999988999999 556666544311
Q ss_pred ccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC
Q psy4832 287 LAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD 364 (770)
Q Consensus 287 ~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g 364 (770)
.....|.+|+++++|+|||++..+ |.+++++|.+..+... ..+..|.+|++++ +|
T Consensus 143 --~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--------------------~~~~~~~~i~~d~-~g 199 (300)
T 2qc5_A 143 --NKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLP--------------------TNAAAPVGITSGN-DG 199 (300)
T ss_dssp --STTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECS--------------------STTCCEEEEEECT-TS
T ss_pred --CCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCC--------------------CCCCCcceEEECC-CC
Confidence 113479999999999999999754 9999998887764321 1245799999999 99
Q ss_pred eEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEE
Q psy4832 365 SLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLY 442 (770)
Q Consensus 365 ~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~ly 442 (770)
+|||++ ++.|.+++++|.+..+... ..+..|.+|+++++|+||
T Consensus 200 ~l~v~~~~~~~i~~~~~~g~~~~~~~~-----------------------------------~~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITTTGEISEYDIP-----------------------------------TPNARPHAITAGKNSEIW 244 (300)
T ss_dssp SEEEEETTTTEEEEECTTCCEEEEECS-----------------------------------STTCCEEEEEECSTTCEE
T ss_pred CEEEEccCCCEEEEEcCCCcEEEEECC-----------------------------------CCCCCceEEEECCCCCEE
Confidence 999999 4789999998876655311 113569999999999999
Q ss_pred EEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCc
Q psy4832 443 IADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSL 522 (770)
Q Consensus 443 VaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~ 522 (770)
|++..+++ |.+++++|++..+.-.. ....|.+|+++++|.||+++. +
T Consensus 245 v~~~~~~~---i~~~~~~g~~~~~~~~~----------------------------~~~~~~~i~~~~~g~l~v~~~-~- 291 (300)
T 2qc5_A 245 FTEWGANQ---IGRITNDNTIQEYQLQT----------------------------ENAEPHGITFGKDGSVWFALK-C- 291 (300)
T ss_dssp EEETTTTE---EEEECTTSCEEEEECCS----------------------------TTCCCCCEEECTTSCEEEECS-S-
T ss_pred EeccCCCe---EEEECCCCcEEEEECCc----------------------------cCCccceeEeCCCCCEEEEcc-C-
Confidence 99987764 67888888876553110 134589999999999999998 6
Q ss_pred eEEeeec
Q psy4832 523 HILALQH 529 (770)
Q Consensus 523 ~I~~i~~ 529 (770)
+|.++.+
T Consensus 292 ~i~~~~p 298 (300)
T 2qc5_A 292 KIGKLNL 298 (300)
T ss_dssp EEEEEEE
T ss_pred ceEEeCC
Confidence 8888765
No 15
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.89 E-value=8.6e-21 Score=210.44 Aligned_cols=264 Identities=15% Similarity=0.141 Sum_probs=193.2
Q ss_pred eeeecCCCeEEECCCccEEecccCCCeEEEEeccC-ccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC--c-e
Q psy4832 126 HHYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTG-LQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF--N-L 200 (770)
Q Consensus 126 ~~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G-~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~--~-~ 200 (770)
..|+.|.+++.+.+|. +|+++..++.|.++...+ ....+ ......|. ++++++|. ||+++. + +
T Consensus 128 a~~~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~----------~~~~~~~~-ia~~~~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 128 AKFKYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTV----------HPGFKGGK-PAVTKDKQRVYSIGWEGTHT 195 (409)
T ss_dssp CCCCCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEE----------EETCCBCB-CEECTTSSEEEEEBSSTTCE
T ss_pred cccCCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEe----------eccCCCCc-eeEecCCCcEEEEecCCCce
Confidence 3788999999999995 899986778888887653 32211 11134577 99999886 888887 2 8
Q ss_pred EEEEcCCCcE-EEEeccC-cccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCC
Q psy4832 201 VRRLTPEGNV-FTVLQLS-ATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDET 278 (770)
Q Consensus 201 I~~i~~~G~v-~~~~~~~-~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~ 278 (770)
|.++++++.. ...++.. ......|.+++++|.++.||+++. +++|++++.. .+....+++.+..
T Consensus 196 I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~------~~~~~~~~~~~~~------- 261 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVK------TQEVTLIKQLELS------- 261 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETT------TCCEEEEEECCCC-------
T ss_pred EEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECC------CCCEEEEeccccc-------
Confidence 9999876432 2233211 225678999999988899999886 6899999531 2445555543221
Q ss_pred CcCCCcccccccccCcc-eEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCc
Q psy4832 279 NCGDNGPALAAKLSHPK-GLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWP 354 (770)
Q Consensus 279 ~~g~~g~~~~a~l~~P~-gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P 354 (770)
+.. -..|. +|++++ +|.|||+|..+ |++++.+|.+.+++|...... . .......++|.+|
T Consensus 262 --g~~-------~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g------~-~dg~~~~~~~~~P 325 (409)
T 3hrp_A 262 --GSL-------GTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKT------V-QDGLREEALFAQP 325 (409)
T ss_dssp --SCC-------CCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCS------C-BCEEGGGCBCSSE
T ss_pred --CCC-------CCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCC------c-CCCcccccEeCCC
Confidence 100 12377 999999 68999999876 999999999999988752111 1 1235667789999
Q ss_pred ceEEEeCCCCeEEEEeC---CEEEEEc-CCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCe
Q psy4832 355 TGLALSPLDDSLHFIDD---RVIFKLT-NDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSL 430 (770)
Q Consensus 355 ~gla~d~~~g~lyv~D~---~~I~~i~-~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P 430 (770)
.+|++++ +|+|||+|. ++|++++ ++|.+.+++|.+...... + ..+..+.|..|
T Consensus 326 ~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~--~--------------------g~~~~~~~~~P 382 (409)
T 3hrp_A 326 NGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQI--D--------------------GTPLEATFNYP 382 (409)
T ss_dssp EEEEECT-TCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCC--C--------------------BSTTTCCBSSE
T ss_pred eEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcC--C--------------------CChhceEeCCc
Confidence 9999999 999999995 7999999 899999999875432111 1 12355678999
Q ss_pred eEEEEcCCCCEEEEeCCCCceeeE
Q psy4832 431 TALAFSPTGDLYIADIDARKVNAL 454 (770)
Q Consensus 431 ~giavd~~G~lyVaD~~~~ri~~i 454 (770)
.+|+++++|+|||||+.++||++|
T Consensus 383 ~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 383 YDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EEEEECSSSEEEEEESTTCEEEEE
T ss_pred eEEEEcCCCCEEEEECCCCeEEEE
Confidence 999999999999999999975443
No 16
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.89 E-value=5e-21 Score=198.60 Aligned_cols=235 Identities=19% Similarity=0.298 Sum_probs=169.2
Q ss_pred CceEEEEcCCCCEEE-EeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYV-GDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv-~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
.|.+|+++++|+||| ++. +.|.++++++.....+. ...+..|.+|++++ +|+|||++. +++|+++ +
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~-------d 93 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP--FNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTL-------A 93 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC--CCSCCSCCCEEECT-TCCEEEEET-TTEEEEE-------C
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe--eCCcCCcceeEECC-CCCEEEEcC-CCEEEEE-------e
Confidence 999999999999999 865 58999998766555442 33567899999997 788999998 7899999 4
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCc
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIW 335 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~ 335 (770)
+++........ ..+..|.+|+++++|+|||++..+ |.+++..........
T Consensus 94 ~~~~~~~~~~~--------------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-------- 145 (270)
T 1rwi_B 94 AGSNNQTVLPF--------------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-------- 145 (270)
T ss_dssp TTCSCCEECCC--------------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC--------
T ss_pred CCCceEeeeec--------------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec--------
Confidence 44432221110 114579999999999999998654 888865432111110
Q ss_pred CCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccc
Q psy4832 336 SPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKS 413 (770)
Q Consensus 336 ~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (770)
...+..|.+|++++ +|+|||++ +++|++++.++.......
T Consensus 146 ------------~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~------------------------- 187 (270)
T 1rwi_B 146 ------------FTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLP------------------------- 187 (270)
T ss_dssp ------------CCSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECC-------------------------
T ss_pred ------------cccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeec-------------------------
Confidence 11356799999999 89999999 479999998764322210
Q ss_pred cccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcc
Q psy4832 414 TVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETL 493 (770)
Q Consensus 414 ~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~ 493 (770)
...+..|.+|+++++|.|||++..+++ |.++++++.......
T Consensus 188 ----------~~~~~~p~~i~~d~~g~l~v~~~~~~~---v~~~~~~~~~~~~~~------------------------- 229 (270)
T 1rwi_B 188 ----------FTDITAPWGIAVDEAGTVYVTEHNTNQ---VVKLLAGSTTSTVLP------------------------- 229 (270)
T ss_dssp ----------CSSCCSEEEEEECTTCCEEEEETTTSC---EEEECTTCSCCEECC-------------------------
T ss_pred ----------ccCCCCceEEEECCCCCEEEEECCCCc---EEEEcCCCCcceeec-------------------------
Confidence 012356999999999999999998875 677787765322210
Q ss_pred cccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecCCcc
Q psy4832 494 LTSTARFTSISALSVSPDGVVNVADQGSLHILALQHYLPT 533 (770)
Q Consensus 494 ~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~~~~ 533 (770)
...+..|.+|+++++|.|||+|.++++|+.+....+.
T Consensus 230 ---~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 230 ---FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ---CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ---cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 0124679999999999999999999999998776543
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.89 E-value=1e-19 Score=191.12 Aligned_cols=236 Identities=17% Similarity=0.238 Sum_probs=184.0
Q ss_pred ccccCceEEEEcCCCCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 177 ARLLTPVALTSGPDGSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 177 ~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
..+..|.+|+++++|+|||++. +.|.+++++|++..+. . ...+..|.+|++++ +|.||+++..+++|.++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~----- 88 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFE-V-PTPDAKVMCLIVSS-LGDIWFTENGANKIGKL----- 88 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE-C-SSTTCCEEEEEECT-TSCEEEEETTTTEEEEE-----
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEE-C-CCCCCcceeEEECC-CCCEEEEecCCCeEEEE-----
Confidence 3467899999999999999996 6999999988777642 2 23457899999996 89999999988999999
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCC
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHH 332 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~ 332 (770)
++++.+..+.... ....|.+|+++++|+|||++..+ |.+++++|.+..+....
T Consensus 89 --d~~g~~~~~~~~~--------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--- 143 (300)
T 2qc5_A 89 --SKKGGFTEYPLPQ--------------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPN--- 143 (300)
T ss_dssp --CTTSCEEEEECSS--------------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSS---
T ss_pred --CCCCCeEEecCCC--------------------CCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCC---
Confidence 5566665443210 12468999999999999999743 99999888877543110
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcccccccccc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKT 410 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~ 410 (770)
....|.+|++++ +|+|||++ ++.|++++++|++..+.. +
T Consensus 144 -----------------~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~-~-------------------- 184 (300)
T 2qc5_A 144 -----------------KGSYPAFITLGS-DNALWFTENQNNSIGRITNTGKLEEYPL-P-------------------- 184 (300)
T ss_dssp -----------------TTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEEC-S--------------------
T ss_pred -----------------CCCCceeEEECC-CCCEEEEecCCCeEEEECCCCcEEEeeC-C--------------------
Confidence 244799999999 89999999 579999999888765431 1
Q ss_pred ccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCcc
Q psy4832 411 KKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSK 490 (770)
Q Consensus 411 ~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~ 490 (770)
..+..|.+|+++++|+|||++..+++ |.+++++|.+..+...
T Consensus 185 --------------~~~~~~~~i~~d~~g~l~v~~~~~~~---i~~~~~~g~~~~~~~~--------------------- 226 (300)
T 2qc5_A 185 --------------TNAAAPVGITSGNDGALWFVEIMGNK---IGRITTTGEISEYDIP--------------------- 226 (300)
T ss_dssp --------------STTCCEEEEEECTTSSEEEEETTTTE---EEEECTTCCEEEEECS---------------------
T ss_pred --------------CCCCCcceEEECCCCCEEEEccCCCE---EEEEcCCCcEEEEECC---------------------
Confidence 11356999999999999999988764 6778888877655311
Q ss_pred CcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeec
Q psy4832 491 ETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 491 d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~ 529 (770)
..+..|.+|+++++|.|||++..+++|.++..
T Consensus 227 -------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 227 -------TPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp -------STTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred -------CCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 11456999999999999999999889998866
No 18
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.88 E-value=3e-21 Score=209.42 Aligned_cols=229 Identities=18% Similarity=0.236 Sum_probs=174.4
Q ss_pred eEEEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-
Q psy4832 183 VALTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN- 261 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~- 261 (770)
...+.++++.|+++..+.|++++++|...+.+ ...+..|.+|++++.++.|||+|..+++|++++ ++|.
T Consensus 37 ~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~---~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~-------~~g~~ 106 (349)
T 3v64_C 37 SCKALGPEPVLLFANRIDIRQVLPHRSEYTLL---LNNLENAIALDFHHRRELVFWSDVTLDRILRAN-------LNGSN 106 (349)
T ss_dssp CEEESSSCCEEEEECBSCEEEECTTSCCEEEE---ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-------TTSCS
T ss_pred cccccccCceeEeecccceEEEeCCCCeeEEe---ecCCCceEEEEEeccccEEEEEeccCCceEEEe-------cCCCC
Confidence 45566778889999999999999998655444 346778999999988999999999999999995 3332
Q ss_pred EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCC
Q psy4832 262 WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 262 ~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~ 338 (770)
.+.+.. ..+..|.|||+|+ .|+||++|..+ |.+++.+|...+.+..
T Consensus 107 ~~~~~~---------------------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~---------- 155 (349)
T 3v64_C 107 VEEVVS---------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---------- 155 (349)
T ss_dssp CEEEEC---------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------
T ss_pred ceEEEe---------------------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe----------
Confidence 233322 1245799999996 78899999875 9999998865443322
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEe--C-CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccc
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFID--D-RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTV 415 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~-~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (770)
..+..|.+|++||.++.|||+| + ++|++++.+|.......
T Consensus 156 ----------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~--------------------------- 198 (349)
T 3v64_C 156 ----------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA--------------------------- 198 (349)
T ss_dssp ----------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC---------------------------
T ss_pred ----------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE---------------------------
Confidence 1367899999998788999999 3 78999999986443331
Q ss_pred cCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEE-EeecCccCCCCCcCCCCCcccccCccCcc
Q psy4832 416 QDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMF-DFAGRWQSDKKNCNTTNCAEFEKNSKETL 493 (770)
Q Consensus 416 ~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~-~~aG~~~~~~~~~~~~~~~~~~~~~~d~~ 493 (770)
...+..|+|||+|+ ++.|||+|+.+++ |.+++.+|... ++..
T Consensus 199 --------~~~~~~PnGla~d~~~~~lY~aD~~~~~---I~~~~~dG~~~~~~~~------------------------- 242 (349)
T 3v64_C 199 --------DTHLFWPNGLTIDYAGRRMYWVDAKHHV---IERANLDGSHRKAVIS------------------------- 242 (349)
T ss_dssp --------CSSCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTSCSCEEEEC-------------------------
T ss_pred --------ECCCCCcceEEEeCCCCEEEEEECCCCE---EEEEeCCCCceEEEEe-------------------------
Confidence 11256799999996 6779999999875 67777777422 2221
Q ss_pred cccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 494 LTSTARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 494 ~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
..+..|.||+++ ++.||++|.++++|.++.+.
T Consensus 243 ----~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 243 ----QGLPHPFAITVF-EDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp ----SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred ----CCCCCceEEEEE-CCEEEEecCCCCeEEEEEcc
Confidence 115689999995 67999999999999999753
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.88 E-value=6.8e-21 Score=209.61 Aligned_cols=229 Identities=18% Similarity=0.228 Sum_probs=173.9
Q ss_pred eEEEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-
Q psy4832 183 VALTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN- 261 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~- 261 (770)
...+.++++.|++++.+.|+++++++...+.+ ...+..|.+|++++.++.|||+|..+++|++++ ++|.
T Consensus 80 ~C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~---~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~-------~~g~~ 149 (386)
T 3v65_B 80 SCKALGPEPVLLFANRIDIRQVLPHRSEYTLL---LNNLENAIALDFHHRRELVFWSDVTLDRILRAN-------LNGSN 149 (386)
T ss_dssp CEEECSSCCEEEEECBSCEEEECTTSCCCEEE---ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-------TTSCC
T ss_pred eECCccccceeEeecCccceeeccCCCcEEEE---ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEe-------cCCCC
Confidence 34556678889999999999999987654443 246778999999988999999999999999994 4443
Q ss_pred EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCC
Q psy4832 262 WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 262 ~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~ 338 (770)
.+.+... .+..|.|||+|+ .|+||++|..+ |.+++.+|...+.+..
T Consensus 150 ~~~~~~~---------------------~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~---------- 198 (386)
T 3v65_B 150 VEEVVST---------------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---------- 198 (386)
T ss_dssp EEEEECS---------------------SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC----------
T ss_pred cEEEEeC---------------------CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec----------
Confidence 3344321 245799999996 78899999876 9999998854433321
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEe--C-CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccc
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFID--D-RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTV 415 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~-~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (770)
..|..|.+|++||.++.|||+| + ++|++++.+|....+...
T Consensus 199 ----------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-------------------------- 242 (386)
T 3v65_B 199 ----------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-------------------------- 242 (386)
T ss_dssp ----------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--------------------------
T ss_pred ----------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE--------------------------
Confidence 1367899999998788999999 3 789999999864333311
Q ss_pred cCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEE-EeecCccCCCCCcCCCCCcccccCccCcc
Q psy4832 416 QDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMF-DFAGRWQSDKKNCNTTNCAEFEKNSKETL 493 (770)
Q Consensus 416 ~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~-~~aG~~~~~~~~~~~~~~~~~~~~~~d~~ 493 (770)
..+..|+|||+|+ ++.|||+|..+++ |++++.+|... ++..
T Consensus 243 ---------~~~~~PnGlavd~~~~~lY~aD~~~~~---I~~~d~dG~~~~~~~~------------------------- 285 (386)
T 3v65_B 243 ---------THLFWPNGLTIDYAGRRMYWVDAKHHV---IERANLDGSHRKAVIS------------------------- 285 (386)
T ss_dssp ---------SSCSCEEEEEEEGGGTEEEEEETTTTE---EEEECTTSCSCEEEEC-------------------------
T ss_pred ---------CCCCCeeeEEEeCCCCEEEEEECCCCE---EEEEeCCCCeeEEEEE-------------------------
Confidence 1256799999996 6789999999875 77788777422 2221
Q ss_pred cccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 494 LTSTARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 494 ~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
..+..|.||+++ ++.|||+|.++++|+++.+.
T Consensus 286 ----~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 286 ----QGLPHPFAITVF-EDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp ----SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred ----CCCCCceEEEEE-CCEEEEeeCCCCeEEEEECC
Confidence 115679999994 67999999999999999753
No 20
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=4.1e-21 Score=206.58 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=185.4
Q ss_pred CCCccceeeeeecCCCeEEECCCccEEecccCCC------------------------eEEEEecc-CccCCccCCCCCc
Q psy4832 118 GGWSLDVHHHYNFHEGILQKGDGSSLHLKHEFPR------------------------TVSVVMGT-GLQRPLVCKDCDG 172 (770)
Q Consensus 118 ggw~l~~~~~~~~~~gil~~~dG~~~~~~~~~~~------------------------~i~~v~g~-G~~~~~~~~~~~g 172 (770)
..|.-. ...|..+.|++...+| ++|+++..+. .|.++... |....
T Consensus 14 ~~wp~~-~~~l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-------- 83 (329)
T 3fvz_A 14 LDWPGV-YLLPGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ-------- 83 (329)
T ss_dssp TTCGGG-GCCCSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE--------
T ss_pred cCCchh-ceecCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe--------
Confidence 456432 4567789999999999 5788874442 35555432 33211
Q ss_pred ccccccccCceEEEEcCCCCEEEEeC--ceEEEEcCCCc--EEEEecc------CcccccceeEEEEeCCCCcEEEEeC-
Q psy4832 173 VARDARLLTPVALTSGPDGSLYVGDF--NLVRRLTPEGN--VFTVLQL------SATQVSYQYYLALSPADGHLYISDA- 241 (770)
Q Consensus 173 ~~~~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~--v~~~~~~------~~~~~~~p~~lav~p~~g~lyvsd~- 241 (770)
......|..|.+|+++++|+|||+|. ++|++++++|+ ....++. ....+..|.+|+++|.++.|||+|.
T Consensus 84 ~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 84 SSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp EECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred ccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 11135678999999999999999997 59999999987 3333321 1346778999999987899999997
Q ss_pred CCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccC-CcEEEEeCCC--eEEECC
Q psy4832 242 EKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKAD-KTMFIADGTN--IRVVSP 318 (770)
Q Consensus 242 ~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~-G~lYvaD~~~--Ir~id~ 318 (770)
.+++|+++ +++|.+...++... .+..+....|..|.+|+++++ |+|||+|..+ |+++++
T Consensus 164 ~~~~I~~~-------~~~g~~~~~~~~~g-----------~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 164 CNSRIVQF-------SPSGKFVTQWGEES-----------SGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp SCCEEEEE-------CTTSCEEEEECEEC-----------CSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCeEEEE-------cCCCCEEEEeccCC-----------CCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 79999999 67787766654321 122234567889999999998 8999999877 999998
Q ss_pred C-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEc-CCCcEEEEecCCCCCC
Q psy4832 319 E-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLT-NDLKVKIVAGIPLHCR 394 (770)
Q Consensus 319 ~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~-~~G~v~~vaG~~~~~~ 394 (770)
+ |++...+....... .... ....| +++++. +|++||+| +++|++++ .+|++....+..
T Consensus 226 ~~G~~~~~~~~~~~~~-----------~~~~-~~~~p-g~~~~~-~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~---- 287 (329)
T 3fvz_A 226 DTKEFVREIKHASFGR-----------NVFA-ISYIP-GFLFAV-NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV---- 287 (329)
T ss_dssp TTCCEEEEECCTTTTT-----------CEEE-EEEET-TEEEEE-ECCCCTTCSCCCCEEEEETTTCCEEEEECCS----
T ss_pred CCCcEEEEEeccccCC-----------Ccce-eeecC-CEEEEe-CCCEEeccCCCcEEEEEEcCCCeEEEEEcCC----
Confidence 7 87766554322110 0000 11134 666665 66777776 46888988 667766555421
Q ss_pred CCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCC
Q psy4832 395 TGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTG 461 (770)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G 461 (770)
...+..|.+|+++++|+|||+|..+++ |++++.+|
T Consensus 288 -----------------------------~~~~~~p~~ia~~~dG~lyvad~~~~~---I~~~~~~~ 322 (329)
T 3fvz_A 288 -----------------------------RKHFDMPHDIVASEDGTVYIGDAHTNT---VWKFTLTE 322 (329)
T ss_dssp -----------------------------SSCCSSEEEEEECTTSEEEEEESSSCC---EEEEEEEE
T ss_pred -----------------------------CCccCCeeEEEECCCCCEEEEECCCCE---EEEEeCCc
Confidence 123577999999999999999999986 55655544
No 21
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.87 E-value=4e-19 Score=186.43 Aligned_cols=274 Identities=16% Similarity=0.181 Sum_probs=202.4
Q ss_pred ecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC--ceEEEEcC
Q psy4832 129 NFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF--NLVRRLTP 206 (770)
Q Consensus 129 ~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~ 206 (770)
+.|.++..+.+|. +|++....+.|..+...+....+.. ......|.+|+++++|.||+++. +.|.++++
T Consensus 15 ~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~~~~~~~~--------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQHKANMISCINLDGKITEYPL--------PTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEEEEEC--------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccceEECCCCC-EEEEecCCCcEEEEcCCCCeEEecC--------CcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 4677888888884 7777645677888766544322110 11236799999999999999986 58999999
Q ss_pred CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCccc
Q psy4832 207 EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPA 286 (770)
Q Consensus 207 ~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~ 286 (770)
+|++..+.. ......|.+|++++ +|.||+++..++.|+++ ++++....+...
T Consensus 86 ~g~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~-------d~~g~~~~~~~~------------------ 137 (299)
T 2z2n_A 86 KGIIKEYTL--PNPDSAPYGITEGP-NGDIWFTEMNGNRIGRI-------TDDGKIREYELP------------------ 137 (299)
T ss_dssp TSCEEEEEC--SSTTCCEEEEEECT-TSCEEEEETTTTEEEEE-------CTTCCEEEEECS------------------
T ss_pred CCcEEEEeC--CCcCCCceeeEECC-CCCEEEEecCCceEEEE-------CCCCCEEEecCC------------------
Confidence 988765431 22456899999996 89999999988999999 556666544321
Q ss_pred ccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC
Q psy4832 287 LAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD 364 (770)
Q Consensus 287 ~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g 364 (770)
.....|.+|+++++|+||+++... |.+++++|.+..+.... .+..|.+|++++ +|
T Consensus 138 --~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------------------~~~~~~~i~~~~-~g 194 (299)
T 2z2n_A 138 --NKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPT--------------------PASGPVGITKGN-DD 194 (299)
T ss_dssp --STTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSS--------------------TTCCEEEEEECT-TS
T ss_pred --CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCC--------------------CCCcceeEEECC-CC
Confidence 113468999999999999998653 99999988877653211 245689999999 89
Q ss_pred eEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEE
Q psy4832 365 SLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLY 442 (770)
Q Consensus 365 ~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~ly 442 (770)
+|||++ .+.|.+++++|++..+... ..+..|.+|+++++|+||
T Consensus 195 ~l~v~~~~~~~i~~~~~~g~~~~~~~~-----------------------------------~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 195 ALWFVEIIGNKIGRITTSGEITEFKIP-----------------------------------TPNARPHAITAGAGIDLW 239 (299)
T ss_dssp SEEEEETTTTEEEEECTTCCEEEEECS-----------------------------------STTCCEEEEEECSTTCEE
T ss_pred CEEEEccCCceEEEECCCCcEEEEECC-----------------------------------CCCCCceeEEECCCCCEE
Confidence 999999 5899999998876654211 113469999999999999
Q ss_pred EEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCc
Q psy4832 443 IADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSL 522 (770)
Q Consensus 443 VaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~ 522 (770)
|++..+++ |.+++++|.+..+.... ....|.+|++ ++|.||+++. ++
T Consensus 240 v~~~~~~~---i~~~d~~g~~~~~~~~~----------------------------~~~~~~~i~~-~~g~l~v~~~-~~ 286 (299)
T 2z2n_A 240 FTEWGANK---IGRLTSNNIIEEYPIQI----------------------------KSAEPHGICF-DGETIWFAME-CD 286 (299)
T ss_dssp EEETTTTE---EEEEETTTEEEEEECSS----------------------------SSCCEEEEEE-CSSCEEEEET-TT
T ss_pred EeccCCce---EEEECCCCceEEEeCCC----------------------------CCCccceEEe-cCCCEEEEec-CC
Confidence 99977664 67778888766553111 1346999999 9999999987 46
Q ss_pred eEEeeecC
Q psy4832 523 HILALQHY 530 (770)
Q Consensus 523 ~I~~i~~~ 530 (770)
.|.++.+.
T Consensus 287 ~l~~~~~~ 294 (299)
T 2z2n_A 287 KIGKLTLI 294 (299)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEcC
Confidence 77777553
No 22
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.87 E-value=8.4e-19 Score=183.97 Aligned_cols=235 Identities=15% Similarity=0.215 Sum_probs=181.6
Q ss_pred cccCceEEEEcCCCCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 178 RLLTPVALTSGPDGSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 178 ~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
.+..|.+|++|++|+||+++. +.|.+++++|.+..+.. ......|.+|++++ +|.||+++..+++|+++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~------ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPL--PTPDAKVMCLTISS-DGEVWFTENAANKIGRI------ 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEC--SSTTCCEEEEEECT-TSCEEEEETTTTEEEEE------
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecC--CcccCceeeEEECC-CCCEEEeCCCCCeEEEE------
Confidence 456899999999999999996 58999998887765542 12346799999996 89999999988999999
Q ss_pred cCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCC
Q psy4832 256 ADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHN 333 (770)
Q Consensus 256 ~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~ 333 (770)
++++.+..+... .....|.+|+++++|.|||++... |.+++++|.+..+....
T Consensus 84 -~~~g~~~~~~~~--------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~---- 138 (299)
T 2z2n_A 84 -TKKGIIKEYTLP--------------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPN---- 138 (299)
T ss_dssp -CTTSCEEEEECS--------------------STTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSS----
T ss_pred -CCCCcEEEEeCC--------------------CcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCC----
Confidence 555666554311 013469999999999999998643 99999988877653211
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTK 411 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~ 411 (770)
....|.+|++++ +|+||+++ ++.|++++++|++..+...
T Consensus 139 ----------------~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~---------------------- 179 (299)
T 2z2n_A 139 ----------------KGSYPSFITLGS-DNALWFTENQNNAIGRITESGDITEFKIP---------------------- 179 (299)
T ss_dssp ----------------TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECS----------------------
T ss_pred ----------------CCCCCceEEEcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCC----------------------
Confidence 134689999999 99999998 4799999998877654311
Q ss_pred cccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccC
Q psy4832 412 KSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKE 491 (770)
Q Consensus 412 ~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d 491 (770)
..+..|.+|+++++|.|||++...++ |.+++++|++..+...
T Consensus 180 -------------~~~~~~~~i~~~~~g~l~v~~~~~~~---i~~~~~~g~~~~~~~~---------------------- 221 (299)
T 2z2n_A 180 -------------TPASGPVGITKGNDDALWFVEIIGNK---IGRITTSGEITEFKIP---------------------- 221 (299)
T ss_dssp -------------STTCCEEEEEECTTSSEEEEETTTTE---EEEECTTCCEEEEECS----------------------
T ss_pred -------------CCCCcceeEEECCCCCEEEEccCCce---EEEECCCCcEEEEECC----------------------
Confidence 11345899999999999999987764 6777888876654211
Q ss_pred cccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeec
Q psy4832 492 TLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 492 ~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~ 529 (770)
..+..|.+|+++++|.|||++..+++|.++..
T Consensus 222 ------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 222 ------TPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ------STTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred ------CCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 11356999999999999999988889988875
No 23
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.87 E-value=9.6e-21 Score=209.30 Aligned_cols=227 Identities=17% Similarity=0.204 Sum_probs=170.0
Q ss_pred cCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCC-----cE
Q psy4832 188 GPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSI-----NW 262 (770)
Q Consensus 188 ~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g-----~~ 262 (770)
++...|++++.+.|++++.++...+.+ ...+..|.+|++++.++.|||+|..+++|++++ +++ ..
T Consensus 81 ~~~~~ll~~~~~~I~~i~l~~~~~~~~---~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~-------~~g~~~~~~~ 150 (400)
T 3p5b_L 81 GSIAYLFFTNRHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQ-------LDRAHGVSSY 150 (400)
T ss_dssp TTSCEEEEEETTEEEEECTTSCSCEEE---ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-------C------CCC
T ss_pred cccceeEEeccceeEEEccCCcceeEe---ccccCcceEEeeeeccCceEEEecCCCeEEEEE-------cccCCCCCcc
Confidence 456678999999999999887643333 246788999999998999999999999999994 333 12
Q ss_pred EEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCc
Q psy4832 263 EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFN 339 (770)
Q Consensus 263 ~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~ 339 (770)
..++. ..+..|.|||+|. .++||++|..+ |++++.+|...+.+..
T Consensus 151 ~~~~~---------------------~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~----------- 198 (400)
T 3p5b_L 151 DTVIS---------------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR----------- 198 (400)
T ss_dssp EEEEC---------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-----------
T ss_pred eEEEe---------------------CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-----------
Confidence 23332 2255899999997 78999999876 9999999864433321
Q ss_pred cCCCcccccccccCcceEEEeCCCCeEEEEe---CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcccccccccccccccc
Q psy4832 340 CHRSFPASTAQLQWPTGLALSPLDDSLHFID---DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQ 416 (770)
Q Consensus 340 ~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D---~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (770)
..+..|.+|++||..|.|||+| +++|++++.+|.......
T Consensus 199 ---------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~---------------------------- 241 (400)
T 3p5b_L 199 ---------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV---------------------------- 241 (400)
T ss_dssp ---------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE----------------------------
T ss_pred ---------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE----------------------------
Confidence 1366899999999789999999 378999999986433321
Q ss_pred CCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccc
Q psy4832 417 DDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLT 495 (770)
Q Consensus 417 ~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 495 (770)
...+..|+|||+|+ ++.|||+|..+++ |++++.+|........
T Consensus 242 -------~~~l~~P~glavd~~~~~lY~aD~~~~~---I~~~d~dG~~~~~~~~-------------------------- 285 (400)
T 3p5b_L 242 -------TENIQWPNGITLDLLSGRLYWVDSKLHS---ISSIDVNGGNRKTILE-------------------------- 285 (400)
T ss_dssp -------CSSCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTSCCCEEEEE--------------------------
T ss_pred -------ECCCCceEEEEEEeCCCEEEEEECCCCE---EEEEeCCCCccEEEEe--------------------------
Confidence 11256799999996 5679999999875 6777777753222211
Q ss_pred cceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 496 STARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 496 ~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
....+..|.||+++ .+.||++|..+++|+++.+.
T Consensus 286 ~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 286 DEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS
T ss_pred CCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC
Confidence 11236789999995 56899999999999999754
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.86 E-value=3.4e-20 Score=201.12 Aligned_cols=196 Identities=21% Similarity=0.272 Sum_probs=149.3
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcE-EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNV-FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
..+..|.+|++|+ ++.|||+|. ++|+|++++|.. ..++ ...+..|.+||+++.+++|||+|..+++|.+++
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~---~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~-- 144 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN-- 144 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE--
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE---eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEc--
Confidence 4567899999996 789999997 599999998764 3443 346778999999988999999999999999994
Q ss_pred CCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEEeecC
Q psy4832 253 ESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHTLIGH 328 (770)
Q Consensus 253 ~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t~~g~ 328 (770)
.+|....+.. ...+..|.+|++|+ +|.||++|..+ |.+++.+|...+.+..
T Consensus 145 -----~dG~~~~~l~--------------------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 145 -----LDGAHRKVLL--------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp -----TTSCSCEEEE--------------------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred -----CCCCceEEEE--------------------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 4554322221 12266899999997 78899999764 9999999855443322
Q ss_pred CCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcE-EEEecCCCCCCCCCCCCccccc
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKV-KIVAGIPLHCRTGDKDKRDFKD 405 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v-~~vaG~~~~~~~~~~~~~~~~~ 405 (770)
..+.+|.||++|+.++.|||+| +++|++++.+|.. ++++.
T Consensus 200 --------------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~----------------- 242 (349)
T 3v64_C 200 --------------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS----------------- 242 (349)
T ss_dssp --------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----------------
T ss_pred --------------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-----------------
Confidence 1377999999998688999999 5899999988753 22221
Q ss_pred cccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc-CCCc
Q psy4832 406 KQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID-STGR 462 (770)
Q Consensus 406 ~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~-~~G~ 462 (770)
..+..|.||+++ ++.|||+|+.+++| .+++ .+|+
T Consensus 243 -------------------~~~~~P~giav~-~~~ly~td~~~~~V---~~~~~~~G~ 277 (349)
T 3v64_C 243 -------------------QGLPHPFAITVF-EDSLYWTDWHTKSI---NSANKFTGK 277 (349)
T ss_dssp -------------------SSCSSEEEEEEE-TTEEEEEETTTTEE---EEEETTTCC
T ss_pred -------------------CCCCCceEEEEE-CCEEEEecCCCCeE---EEEEccCCC
Confidence 124679999995 67999999999875 5555 3554
No 25
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.86 E-value=2.6e-20 Score=199.12 Aligned_cols=223 Identities=18% Similarity=0.194 Sum_probs=166.5
Q ss_pred CCCCEEEEeCceEEEEcCCCc---EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc--EE
Q psy4832 189 PDGSLYVGDFNLVRRLTPEGN---VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN--WE 263 (770)
Q Consensus 189 ~dG~lyv~d~~~I~~i~~~G~---v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~--~~ 263 (770)
|.-.|+++..+.|++++.++. ...++ ..+..|.+|++++.++.|||+|..+++|++++ ++|. ..
T Consensus 3 ~~p~ll~~~~~~I~~i~l~~~~~~~~~~~----~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~-------~~g~~~~~ 71 (318)
T 3sov_A 3 SAPLLLYANRRDLRLVDATNGKENATIVV----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTE-------FNKTESVQ 71 (318)
T ss_dssp -CCEEEEECEEEEEEEETTCTTSCCEEEE----EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEE-------TTSSSCCC
T ss_pred CccEEEEEccCeEEEEECCCCceEEEEEe----cCCCccEEEEEEeCCCEEEEEECCCCcEEEEE-------ccCCCceE
Confidence 455689998899999999875 23332 35678999999988899999999999999995 3332 11
Q ss_pred EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCcc
Q psy4832 264 VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNC 340 (770)
Q Consensus 264 ~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~ 340 (770)
.+. ...+..|.|||+|. .|+||++|..+ |.+++.+|...+.+..
T Consensus 72 ~~~---------------------~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~------------ 118 (318)
T 3sov_A 72 NVV---------------------VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW------------ 118 (318)
T ss_dssp EEE---------------------EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------
T ss_pred EEE---------------------cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe------------
Confidence 111 12256799999996 78999999876 9999999855443322
Q ss_pred CCCcccccccccCcceEEEeCCCCeEEEEe---CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccC
Q psy4832 341 HRSFPASTAQLQWPTGLALSPLDDSLHFID---DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQD 417 (770)
Q Consensus 341 ~~~~~~~~~~l~~P~gla~d~~~g~lyv~D---~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (770)
..+..|.+|++||.+|.||++| +++|++++.+|........
T Consensus 119 --------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---------------------------- 162 (318)
T 3sov_A 119 --------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN---------------------------- 162 (318)
T ss_dssp --------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC----------------------------
T ss_pred --------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE----------------------------
Confidence 1367899999998679999999 4799999999864333211
Q ss_pred CcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCccccc
Q psy4832 418 DSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTS 496 (770)
Q Consensus 418 ~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 496 (770)
..+..|+||++|+ ++.|||+|+.+++ |.+++.+|........
T Consensus 163 -------~~l~~Pnglavd~~~~~lY~aD~~~~~---I~~~d~dG~~~~~~~~--------------------------- 205 (318)
T 3sov_A 163 -------SEIYWPNGLTLDYEEQKLYWADAKLNF---IHKSNLDGTNRQAVVK--------------------------- 205 (318)
T ss_dssp -------SSCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTSCSCEEEEC---------------------------
T ss_pred -------CCCCCccEEEEeccCCEEEEEECCCCE---EEEEcCCCCceEEEec---------------------------
Confidence 1256799999998 6779999999875 6777777642222111
Q ss_pred ceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 497 TARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 497 ~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
..+..|.||+++ .+.||++|..+++|.++.+.
T Consensus 206 -~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 206 -GSLPHPFALTLF-EDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp -SCCSCEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred -CCCCCceEEEEe-CCEEEEEecCCCeEEEEECC
Confidence 125789999998 45899999999999999874
No 26
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.86 E-value=7.3e-20 Score=195.77 Aligned_cols=220 Identities=17% Similarity=0.209 Sum_probs=164.5
Q ss_pred CEEEEeCceEEEEcCCCc-EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-----EEEE
Q psy4832 192 SLYVGDFNLVRRLTPEGN-VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN-----WEVA 265 (770)
Q Consensus 192 ~lyv~d~~~I~~i~~~G~-v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~-----~~~v 265 (770)
.|+++..+.|++++.++. +..++ ..+..|.++++++.++.|||+|..+++|++++ +++. .+.+
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~----~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~-------~~g~~~~~~~~~~ 71 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLSQRMICSTQ-------LDRAHGVSSYDTV 71 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEE----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEE-------C--------CEEE
T ss_pred EEEEECCCeEEEEECCCcceEehh----cCCCceEEEEEEeCCCEEEEEECCCCcEEEEE-------CCCCCCCcccEEE
Confidence 378888889999998864 44443 35788999999988899999999999999994 3331 1122
Q ss_pred ECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEE-EeecCCCCCCCcCCCccC
Q psy4832 266 VGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIH-TLIGHHKHHNIWSPFNCH 341 (770)
Q Consensus 266 aG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~-t~~g~~~~~~~~~p~~~~ 341 (770)
. ...+..|.|||+|. .++||++|..+ |.+++.+|... +++.
T Consensus 72 ~---------------------~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-------------- 116 (316)
T 1ijq_A 72 I---------------------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------- 116 (316)
T ss_dssp E---------------------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE--------------
T ss_pred E---------------------eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE--------------
Confidence 1 12256899999995 78899999876 99999988543 3331
Q ss_pred CCcccccccccCcceEEEeCCCCeEEEEeC---CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCC
Q psy4832 342 RSFPASTAQLQWPTGLALSPLDDSLHFIDD---RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDD 418 (770)
Q Consensus 342 ~~~~~~~~~l~~P~gla~d~~~g~lyv~D~---~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (770)
..+..|.+|++||.++.|||+|. ++|++++.+|....+...
T Consensus 117 -------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~----------------------------- 160 (316)
T 1ijq_A 117 -------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----------------------------- 160 (316)
T ss_dssp -------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----------------------------
T ss_pred -------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE-----------------------------
Confidence 13568999999987889999992 799999999875543321
Q ss_pred cccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcE-EEeecCccCCCCCcCCCCCcccccCccCccccc
Q psy4832 419 SVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRM-FDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTS 496 (770)
Q Consensus 419 ~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i-~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 496 (770)
..+..|+||++|+ ++.|||+|..+++ |.+++.+|.. .+++..
T Consensus 161 ------~~~~~P~gla~d~~~~~lY~~D~~~~~---I~~~d~dg~~~~~~~~~--------------------------- 204 (316)
T 1ijq_A 161 ------ENIQWPNGITLDLLSGRLYWVDSKLHS---ISSIDVNGGNRKTILED--------------------------- 204 (316)
T ss_dssp ------SSCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTSCSCEEEEEC---------------------------
T ss_pred ------CCCCCceEEEEeccCCEEEEEECCCCe---EEEEecCCCceEEEeec---------------------------
Confidence 1256799999997 5679999999875 6777877742 222211
Q ss_pred ceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 497 TARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 497 ~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
...+..|.||+++ ++.|||+|.++++|.++.+.
T Consensus 205 ~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 205 EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 1125679999997 57999999999999999764
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.85 E-value=7.1e-20 Score=201.46 Aligned_cols=195 Identities=22% Similarity=0.302 Sum_probs=149.4
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcEE-EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNVF-TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v~-~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
..+..|.+|++|+ ++.|||+|. ++|+|++++|... +++ ...+..|.+||+++.++.|||+|..+++|.++
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~---~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~--- 186 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVA--- 186 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE---CSSCSCCCCEEEETTTTEEEEEETTTTEEEEC---
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE---eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEE---
Confidence 4577899999996 788999997 5999999998644 444 34677899999998899999999999999998
Q ss_pred CCccCCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEEeec
Q psy4832 253 ESVADPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHTLIG 327 (770)
Q Consensus 253 ~~~~~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t~~g 327 (770)
+++|... ++.. ..+..|.+|++|+ +|.||++|..+ |++++++|...+.+.
T Consensus 187 ----~~dg~~~~~l~~---------------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 187 ----NLDGAHRKVLLW---------------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp ----BTTSCSCEEEEC---------------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred ----eCCCCceEEeec---------------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 4555432 2221 2256899999997 67899999765 999999985444332
Q ss_pred CCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcE-EEEecCCCCCCCCCCCCcccc
Q psy4832 328 HHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKV-KIVAGIPLHCRTGDKDKRDFK 404 (770)
Q Consensus 328 ~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v-~~vaG~~~~~~~~~~~~~~~~ 404 (770)
. ..+.+|.||++|+.++.|||+| +++|++++.+|.. ++++.
T Consensus 242 ~--------------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~---------------- 285 (386)
T 3v65_B 242 D--------------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS---------------- 285 (386)
T ss_dssp C--------------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC----------------
T ss_pred E--------------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE----------------
Confidence 2 1367899999997688999999 5899999988753 22221
Q ss_pred ccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc-CCCc
Q psy4832 405 DKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID-STGR 462 (770)
Q Consensus 405 ~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~-~~G~ 462 (770)
..+..|.||+++ ++.|||+|+.+++ |.+++ .+|+
T Consensus 286 --------------------~~~~~P~giav~-~~~ly~td~~~~~---V~~~~~~~G~ 320 (386)
T 3v65_B 286 --------------------QGLPHPFAITVF-EDSLYWTDWHTKS---INSANKFTGK 320 (386)
T ss_dssp --------------------SSCSSEEEEEEE-TTEEEEEETTTTE---EEEEETTTCC
T ss_pred --------------------CCCCCceEEEEE-CCEEEEeeCCCCe---EEEEECCCCc
Confidence 124679999994 6789999999986 45555 4564
No 28
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.85 E-value=1.7e-19 Score=193.02 Aligned_cols=196 Identities=18% Similarity=0.211 Sum_probs=146.7
Q ss_pred cccCceEEEEcC-CCCEEEEeC--ceEEEEcCCC----cE-EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 178 RLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEG----NV-FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 178 ~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G----~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
.+..|.++++|+ ++.|||+|. ++|.+++++| .. .+++ ...+..|.+||+++.+++|||+|..+++|.++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~---~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 104 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE---eCCCCCcCEEEEeecCCeEEEEECCCCEEEEE
Confidence 477899999998 578999997 5999999887 32 3333 34677899999998789999999999999999
Q ss_pred eccCCccCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEE
Q psy4832 250 LSLESVADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHT 324 (770)
Q Consensus 250 ~~~~~~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t 324 (770)
+ ++|.. .++.. ..+..|.+|++|+ +|.||++|..+ |.+++++|...+
T Consensus 105 ~-------~~g~~~~~~~~---------------------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 105 D-------TKGVKRKTLFR---------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp E-------TTSSSEEEEEE---------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred e-------CCCCceEEEEE---------------------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 4 45542 22221 1256899999997 78899999753 999999986655
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCc-EEEEecCCCCCCCCCCCCc
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLK-VKIVAGIPLHCRTGDKDKR 401 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~-v~~vaG~~~~~~~~~~~~~ 401 (770)
.+... .+.+|.||++|+.++.|||+| +++|.+++.+|. .++++..
T Consensus 157 ~~~~~--------------------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~------------ 204 (316)
T 1ijq_A 157 SLVTE--------------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED------------ 204 (316)
T ss_dssp EEECS--------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC------------
T ss_pred EEEEC--------------------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeec------------
Confidence 44321 367999999998678999999 579999999875 3333321
Q ss_pred cccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc
Q psy4832 402 DFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR 462 (770)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~ 462 (770)
...+..|.||+++ .+.|||+|+.+++ |.++++ +|+
T Consensus 205 ----------------------~~~~~~P~giav~-~~~ly~~d~~~~~---V~~~~~~~g~ 240 (316)
T 1ijq_A 205 ----------------------EKRLAHPFSLAVF-EDKVFWTDIINEA---IFSANRLTGS 240 (316)
T ss_dssp ----------------------TTTTSSEEEEEEE-TTEEEEEETTTTE---EEEEETTTCC
T ss_pred ----------------------CCccCCcEEEEEE-CCEEEEEECCCCe---EEEEeCCCCc
Confidence 0125679999997 5899999999986 556664 554
No 29
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.85 E-value=1.6e-19 Score=199.52 Aligned_cols=197 Identities=18% Similarity=0.216 Sum_probs=148.5
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCc-----EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEE
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGN-----VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILR 248 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~-----v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~ 248 (770)
..+..|.+|++|+ ++.|||+|. ++|++++++|. ..+++ ...+..|.+||+|+.+++|||+|..+++|.+
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~---~~~~~~p~glavD~~~~~lY~~d~~~~~I~~ 185 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 185 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---CSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---eCCCCCcccEEEEecCCceEEEECCCCeEEE
Confidence 4578999999997 788999998 59999998873 34444 3467889999999889999999999999999
Q ss_pred EeccCCccCCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEE
Q psy4832 249 VLSLESVADPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIH 323 (770)
Q Consensus 249 i~~~~~~~~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~ 323 (770)
+ +++|... +++. ..+..|.+||+|+ .|.||++|.+. |++++.+|...
T Consensus 186 ~-------~~~g~~~~~l~~---------------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 186 A-------DTKGVKRKTLFR---------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp E-------CTTTCSEEEEEE---------------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred E-------eCCCCceEEEEe---------------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 9 5565532 2221 1266799999998 78899999653 99999998544
Q ss_pred EeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEE-EEecCCCCCCCCCCCC
Q psy4832 324 TLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVK-IVAGIPLHCRTGDKDK 400 (770)
Q Consensus 324 t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~-~vaG~~~~~~~~~~~~ 400 (770)
+.+.. ..|.+|.||++|+.++.|||+| +++|++++.+|... +++..
T Consensus 238 ~~~~~--------------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~----------- 286 (400)
T 3p5b_L 238 YSLVT--------------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED----------- 286 (400)
T ss_dssp EEEEC--------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEEC-----------
T ss_pred EEEEE--------------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeC-----------
Confidence 33322 1377999999998688999999 58999999988533 33211
Q ss_pred ccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc-CCCc
Q psy4832 401 RDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID-STGR 462 (770)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~-~~G~ 462 (770)
...+..|.||+++ .+.|||+|+.+++ |.+++ .+|+
T Consensus 287 -----------------------~~~l~~P~gl~v~-~~~lywtd~~~~~---V~~~~~~~G~ 322 (400)
T 3p5b_L 287 -----------------------EKRLAHPFSLAVF-EDKVFWTDIINEA---IFSANRLTGS 322 (400)
T ss_dssp -----------------------SSTTSSEEEEEEE-TTEEEEEESSSCS---EEEEESSSCC
T ss_pred -----------------------CCCCCCCEEEEEe-CCEEEEecCCCCe---EEEEEcCCCC
Confidence 1235679999995 5689999999987 45555 4564
No 30
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.84 E-value=1.1e-19 Score=215.61 Aligned_cols=235 Identities=16% Similarity=0.167 Sum_probs=171.3
Q ss_pred EEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEE
Q psy4832 185 LTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEV 264 (770)
Q Consensus 185 la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~ 264 (770)
.++++...|+++..+.|++++.++...+.+ ...+..|.+|++++.++.|||+|..+++|+++...+. ...+....
T Consensus 390 ~~~~~~p~Ll~an~~~Ir~i~l~~~~~~~l---~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~--~~~~~~~~ 464 (791)
T 3m0c_C 390 KAVGSIAYLFFTNRHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRA--HGVSSYDT 464 (791)
T ss_dssp EETTSCCEEEEECBSSEEEECTTSCCCEEE---ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CEE
T ss_pred eecccccccccccccceeEeeccCCcceee---ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCC--CCCcceeE
Confidence 344556678899888999999876533332 2357889999999889999999999999999953210 00012233
Q ss_pred EECCCccccCCCCCCcCCCcccccccccCcceEEEccC-CcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccC
Q psy4832 265 AVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKAD-KTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCH 341 (770)
Q Consensus 265 vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~-G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~ 341 (770)
++. ..+..|.|||||.. ++|||+|..+ |++++.+|...+++..
T Consensus 465 vi~---------------------~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~------------- 510 (791)
T 3m0c_C 465 VIS---------------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------------- 510 (791)
T ss_dssp EEC---------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-------------
T ss_pred EEe---------------------cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-------------
Confidence 332 23668999999974 5899999877 9999999865444322
Q ss_pred CCcccccccccCcceEEEeCCCCeEEEEe---CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCC
Q psy4832 342 RSFPASTAQLQWPTGLALSPLDDSLHFID---DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDD 418 (770)
Q Consensus 342 ~~~~~~~~~l~~P~gla~d~~~g~lyv~D---~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (770)
..|..|.+|||||..|.|||+| .++|++++.+|....++..
T Consensus 511 -------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~----------------------------- 554 (791)
T 3m0c_C 511 -------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----------------------------- 554 (791)
T ss_dssp -------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----------------------------
T ss_pred -------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-----------------------------
Confidence 1366899999999779999999 3789999999875544321
Q ss_pred cccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccc
Q psy4832 419 SVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTST 497 (770)
Q Consensus 419 ~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 497 (770)
..|..|.|||+|+ .+.|||+|..+++ |++++.+|......... .
T Consensus 555 ------~~l~~P~GLavD~~~~~LYwaD~~~~~---I~~~d~dG~~~~~v~~~--------------------------~ 599 (791)
T 3m0c_C 555 ------ENIQWPNGITLDLLSGRLYWVDSKLHS---ISSIDVNGGNRKTILED--------------------------E 599 (791)
T ss_dssp ------SSCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTSCSCEEEEEC--------------------------T
T ss_pred ------CCCCCceEEEEecCCCeEEEEeCCCCc---EEEEecCCCceEEEecC--------------------------C
Confidence 1256799999995 6789999998875 67778777533322111 1
Q ss_pred eecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 498 ARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 498 ~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
..|..|.+|++.. +.|||+|..+++|+++.+.
T Consensus 600 ~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 600 KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp TTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred CccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 2367899999964 4999999999999999764
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=5.4e-19 Score=185.30 Aligned_cols=237 Identities=15% Similarity=0.245 Sum_probs=175.8
Q ss_pred eeecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEE-cCCCCEEEEeC---ceEE
Q psy4832 127 HYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTS-GPDGSLYVGDF---NLVR 202 (770)
Q Consensus 127 ~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~-~~dG~lyv~d~---~~I~ 202 (770)
.+..|.+++...+| .+|+++...+.|..+..+|..... .... ......+..|.+|++ +++|.|||++. ++|+
T Consensus 28 ~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~~~~~--~~~~-~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGRFKFQ--FGEC-GKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp CBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTSCEEEE--ECCB-SSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred ccCCCceEEECCCC-CEEEEECCCCEEEEECCCCcEEEE--eccc-CCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 46788999999998 488887577888888766543211 0111 112346788999999 58999999994 5999
Q ss_pred EEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCC
Q psy4832 203 RLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGD 282 (770)
Q Consensus 203 ~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~ 282 (770)
+++++|+....+. ...+..|.+|+++| +|+|||++..+++|+++ ++++......+..
T Consensus 104 ~~d~~g~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~-------~~~g~~~~~~~~~------------- 160 (286)
T 1q7f_A 104 IYNQYGQFVRKFG--ATILQHPRGVTVDN-KGRIIVVECKVMRVIIF-------DQNGNVLHKFGCS------------- 160 (286)
T ss_dssp EECTTSCEEEEEC--TTTCSCEEEEEECT-TSCEEEEETTTTEEEEE-------CTTSCEEEEEECT-------------
T ss_pred EECCCCcEEEEec--CccCCCceEEEEeC-CCCEEEEECCCCEEEEE-------cCCCCEEEEeCCC-------------
Confidence 9999999877664 33567899999997 78999999999999999 5666654443311
Q ss_pred CcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEe
Q psy4832 283 NGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALS 360 (770)
Q Consensus 283 ~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d 360 (770)
..+..|.+|+++++|+|||++..+ |++++++|.....++.. ..+..|.+|+++
T Consensus 161 ------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-------------------g~~~~p~~i~~d 215 (286)
T 1q7f_A 161 ------KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE-------------------GITNYPIGVGIN 215 (286)
T ss_dssp ------TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT-------------------TTSCSEEEEEEC
T ss_pred ------CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC-------------------CccCCCcEEEEC
Confidence 125579999999999999999654 99999988654444321 125689999999
Q ss_pred CCCCeEEEEe--CC-EEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcC
Q psy4832 361 PLDDSLHFID--DR-VIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSP 437 (770)
Q Consensus 361 ~~~g~lyv~D--~~-~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~ 437 (770)
+ +|+|||++ ++ +|.+++++|+........ .....|.+|++++
T Consensus 216 ~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~----------------------------------~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 216 S-NGEILIADNHNNFNLTIFTQDGQLISALESK----------------------------------VKHAQCFDVALMD 260 (286)
T ss_dssp T-TCCEEEEECSSSCEEEEECTTSCEEEEEEES----------------------------------SCCSCEEEEEEET
T ss_pred C-CCCEEEEeCCCCEEEEEECCCCCEEEEEccc----------------------------------CCCCcceeEEECC
Confidence 9 99999999 44 999999988744332211 0123589999999
Q ss_pred CCCEEEEeCCCCce
Q psy4832 438 TGDLYIADIDARKV 451 (770)
Q Consensus 438 ~G~lyVaD~~~~ri 451 (770)
+|+|||++. +++|
T Consensus 261 ~g~l~vs~~-~~~v 273 (286)
T 1q7f_A 261 DGSVVLASK-DYRL 273 (286)
T ss_dssp TTEEEEEET-TTEE
T ss_pred CCcEEEECC-CCeE
Confidence 999999986 4553
No 32
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.84 E-value=1.2e-19 Score=193.86 Aligned_cols=196 Identities=21% Similarity=0.217 Sum_probs=148.2
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcE--EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEec
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNV--FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLS 251 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v--~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~ 251 (770)
..+..|.+|++++ ++.||++|. ++|.+++++|.. .+++ ...+..|.+||+++.+++||++|..+++|.+++
T Consensus 32 ~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~---~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~- 107 (318)
T 3sov_A 32 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV---VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSN- 107 (318)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE---EECCSCCCEEEEETTTTEEEEEETTTTEEEEEE-
T ss_pred cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE---cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEE-
Confidence 3567899999998 789999998 599999998762 2333 345778999999988999999999999999994
Q ss_pred cCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCC-C--eEEECCCCcEEEeec
Q psy4832 252 LESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGT-N--IRVVSPEGIIHTLIG 327 (770)
Q Consensus 252 ~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~-~--Ir~id~~G~i~t~~g 327 (770)
++|....+... ..+..|.+|++|+ .|.||++|.. + |.+++.+|...+.+.
T Consensus 108 ------~dG~~~~~l~~--------------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 108 ------LDGSLRKVLFW--------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp ------TTSCSCEEEEC--------------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred ------CCCCcEEEEEe--------------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 55543222211 2256899999997 6889999964 3 999999985444332
Q ss_pred CCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEE-EEecCCCCCCCCCCCCcccc
Q psy4832 328 HHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVK-IVAGIPLHCRTGDKDKRDFK 404 (770)
Q Consensus 328 ~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~-~vaG~~~~~~~~~~~~~~~~ 404 (770)
. ..+.+|.||++|+.++.|||+| +++|++++.+|... +++.
T Consensus 162 ~--------------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~---------------- 205 (318)
T 3sov_A 162 N--------------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---------------- 205 (318)
T ss_dssp C--------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------
T ss_pred E--------------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec----------------
Confidence 2 1377999999998688999999 58999999987532 3321
Q ss_pred ccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc
Q psy4832 405 DKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR 462 (770)
Q Consensus 405 ~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~ 462 (770)
..+..|.||+++ .+.|||+|+.+++ |.++++ +|+
T Consensus 206 --------------------~~~~~P~glav~-~~~lywtd~~~~~---V~~~~~~~G~ 240 (318)
T 3sov_A 206 --------------------GSLPHPFALTLF-EDILYWTDWSTHS---ILACNKYTGE 240 (318)
T ss_dssp --------------------SCCSCEEEEEEE-TTEEEEEETTTTE---EEEEETTTCC
T ss_pred --------------------CCCCCceEEEEe-CCEEEEEecCCCe---EEEEECCCCC
Confidence 124679999998 4689999999986 555565 554
No 33
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.84 E-value=3.2e-19 Score=185.62 Aligned_cols=220 Identities=18% Similarity=0.197 Sum_probs=160.0
Q ss_pred CEEEEeCceEEEEcCCCcEEE------EeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-EEE
Q psy4832 192 SLYVGDFNLVRRLTPEGNVFT------VLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN-WEV 264 (770)
Q Consensus 192 ~lyv~d~~~I~~i~~~G~v~~------~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~-~~~ 264 (770)
.||+++.++|++++.+|...+ ++ .....+|.++++++.++.|||+|..+++|.+++ +++. ...
T Consensus 3 ~l~~~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~-------~~g~~~~~ 72 (267)
T 1npe_A 3 HLLFAQTGKIERLPLERNTMKKTEAKAFL---HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRAS-------LHGGEPTT 72 (267)
T ss_dssp EEEEEEEEEEEEEEESSSCBCGGGCEEEE---EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEE-------SSSCCCEE
T ss_pred EEEEEcCCeEEEEEecCcccccccceeee---cCCCCcEEEEEEecCCCEEEEEECCCCEEEEEe-------cCCCCcEE
Confidence 478888889999998876432 22 123467999999987899999999999999995 3333 222
Q ss_pred EECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccC
Q psy4832 265 AVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCH 341 (770)
Q Consensus 265 vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~ 341 (770)
+.. ..+..|.+|++|+ .+.|||+|..+ |.+++.+|.....+..
T Consensus 73 ~~~---------------------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~------------- 118 (267)
T 1npe_A 73 IIR---------------------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD------------- 118 (267)
T ss_dssp EEC---------------------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------
T ss_pred EEE---------------------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-------------
Confidence 221 1245799999998 57899999866 9999888743222211
Q ss_pred CCcccccccccCcceEEEeCCCCeEEEEe----CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccC
Q psy4832 342 RSFPASTAQLQWPTGLALSPLDDSLHFID----DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQD 417 (770)
Q Consensus 342 ~~~~~~~~~l~~P~gla~d~~~g~lyv~D----~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (770)
..+..|.+|+++|.++.|||+| +++|++++.+|....+...
T Consensus 119 -------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~---------------------------- 163 (267)
T 1npe_A 119 -------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ---------------------------- 163 (267)
T ss_dssp -------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC----------------------------
T ss_pred -------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE----------------------------
Confidence 1256799999999668999999 3589999988754322210
Q ss_pred CcccccccccCCeeEEEEcCC-CCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCccccc
Q psy4832 418 DSVRASNMDLGSLTALAFSPT-GDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTS 496 (770)
Q Consensus 418 ~~~~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 496 (770)
..+..|.+|++|++ +.|||+|..+++ |.+++.+|.......
T Consensus 164 -------~~~~~P~gia~d~~~~~lyv~d~~~~~---I~~~~~~g~~~~~~~---------------------------- 205 (267)
T 1npe_A 164 -------DNLGLPNGLTFDAFSSQLCWVDAGTHR---AECLNPAQPGRRKVL---------------------------- 205 (267)
T ss_dssp -------TTCSCEEEEEEETTTTEEEEEETTTTE---EEEEETTEEEEEEEE----------------------------
T ss_pred -------CCCCCCcEEEEcCCCCEEEEEECCCCE---EEEEecCCCceEEEe----------------------------
Confidence 12457999999996 569999999875 677887764322110
Q ss_pred ceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 497 TARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 497 ~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
..+..|.+|+++ ++.|||+|.++++|+++...
T Consensus 206 -~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 206 -EGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp -ECCCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred -cCCCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 014569999998 68999999999999888764
No 34
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.83 E-value=8.5e-19 Score=182.40 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=146.4
Q ss_pred ccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcEE-EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 179 LLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNVF-TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 179 l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v~-~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
+..|.++++|+ ++.|||+|. ++|.+++++|... .++ ...+..|.+|++++.++.|||+|..+++|.+++
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~---- 107 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII---RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAK---- 107 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE---CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEE----
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE---ECCCCCccEEEEEecCCeEEEEECCCCEEEEEE----
Confidence 46789999998 678999997 5999999988643 333 345678999999987899999999999999994
Q ss_pred ccCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCC--C--eEEECCCCcEEEeecC
Q psy4832 255 VADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGT--N--IRVVSPEGIIHTLIGH 328 (770)
Q Consensus 255 ~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~--~--Ir~id~~G~i~t~~g~ 328 (770)
.+|.. ..+.. ..+..|.+|++|+ +|.|||+|.. + |.+++.+|.....+..
T Consensus 108 ---~~g~~~~~~~~---------------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~ 163 (267)
T 1npe_A 108 ---MDGTQRRVLFD---------------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ 163 (267)
T ss_dssp ---TTSCSCEEEEC---------------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC
T ss_pred ---cCCCCEEEEEE---------------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE
Confidence 44432 22221 1145799999999 6889999975 2 8888888754333221
Q ss_pred CCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEE-EEecCCCCCCCCCCCCccccc
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVK-IVAGIPLHCRTGDKDKRDFKD 405 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~-~vaG~~~~~~~~~~~~~~~~~ 405 (770)
..+.+|.+|++++.++.|||+| +++|.+++.+|... .+.
T Consensus 164 --------------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~------------------ 205 (267)
T 1npe_A 164 --------------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL------------------ 205 (267)
T ss_dssp --------------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE------------------
T ss_pred --------------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe------------------
Confidence 1356899999998457899999 58999999887532 222
Q ss_pred cccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEEEe
Q psy4832 406 KQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMFDF 466 (770)
Q Consensus 406 ~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~~~ 466 (770)
..+..|.+|+++ ++.|||++..+++ |.++++ +|++...
T Consensus 206 -------------------~~~~~P~gi~~d-~~~lyva~~~~~~---v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 206 -------------------EGLQYPFAVTSY-GKNLYYTDWKTNS---VIAMDLAISKEMDT 244 (267)
T ss_dssp -------------------ECCCSEEEEEEE-TTEEEEEETTTTE---EEEEETTTTEEEEE
T ss_pred -------------------cCCCCceEEEEe-CCEEEEEECCCCe---EEEEeCCCCCceEE
Confidence 013569999998 6889999999875 677887 4765443
No 35
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.83 E-value=4.9e-19 Score=210.03 Aligned_cols=198 Identities=18% Similarity=0.200 Sum_probs=148.6
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCc-----EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEE
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGN-----VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILR 248 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~-----v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~ 248 (770)
..+..|.+|++++ ++.|||+|. ++|++++.+|. ..+++ ...+..|.+||||+.+++|||+|..+++|++
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi---~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE---ecCCCCcceeeeeecCCcEEEEecCCCeEEE
Confidence 4578899999998 789999998 58999998873 33444 3468899999999988899999999999999
Q ss_pred EeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEE
Q psy4832 249 VLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHT 324 (770)
Q Consensus 249 i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t 324 (770)
+ +.+|....+... ..+..|.+||||+ .|.|||+|.++ |.+++.+|...+
T Consensus 498 ~-------~ldG~~~~~l~~--------------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 498 A-------DTKGVKRKTLFR--------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp E-------ETTSSSEEEEEE--------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred E-------eCCCCeEEEEEe--------------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 9 455553322211 1256799999998 58899999764 999999986554
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcc
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRD 402 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~ 402 (770)
.+... .|.+|.||++|+.++.|||+| +++|++++.+|..+.++...
T Consensus 551 ~lv~~--------------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~------------ 598 (791)
T 3m0c_C 551 SLVTE--------------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED------------ 598 (791)
T ss_dssp EEECS--------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC------------
T ss_pred EEEeC--------------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC------------
Confidence 44321 377999999998789999999 58999999998633322110
Q ss_pred ccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc-CCC
Q psy4832 403 FKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID-STG 461 (770)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~-~~G 461 (770)
...|..|.+|+++ .+.|||+|+.+++| .+++ .+|
T Consensus 599 ---------------------~~~l~~P~glav~-~~~lYwtD~~~~~I---~~~dk~tG 633 (791)
T 3m0c_C 599 ---------------------EKRLAHPFSLAVF-EDKVFWTDIINEAI---FSANRLTG 633 (791)
T ss_dssp ---------------------TTTTSSEEEEEEE-TTEEEEEETTTTEE---EEEETTTC
T ss_pred ---------------------CCccCCCCEEEEe-CCEEEEEECCCCEE---EEEeCCCC
Confidence 1235679999996 45899999999875 5554 245
No 36
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.82 E-value=1.8e-18 Score=185.18 Aligned_cols=243 Identities=13% Similarity=0.135 Sum_probs=169.2
Q ss_pred cccccCceEEEEcCCCC-EEEEeC-ceEEEEcCCC-cEEEEeccC----------------cccccceeEEEEeCCCCcE
Q psy4832 176 DARLLTPVALTSGPDGS-LYVGDF-NLVRRLTPEG-NVFTVLQLS----------------ATQVSYQYYLALSPADGHL 236 (770)
Q Consensus 176 ~~~l~~P~~la~~~dG~-lyv~d~-~~I~~i~~~G-~v~~~~~~~----------------~~~~~~p~~lav~p~~g~l 236 (770)
..+|..|.++++|++|+ +|+... ++|.++++++ .+..+.... ...+..|.+|++++.+|+|
T Consensus 15 ~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 15 EAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp ECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred CCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 45688999999999999 555433 5999999876 455443210 0124579999999658999
Q ss_pred EEEeCCCcEEEEEeccCCccCCC-CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCC---
Q psy4832 237 YISDAEKHQILRVLSLESVADPS-INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGT--- 311 (770)
Q Consensus 237 yvsd~~~~~I~~i~~~~~~~~~~-g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~--- 311 (770)
||+|.. +.|+++ +++ +.++.++.... ...+..|.+|++|+ +|+|||+|..
T Consensus 95 ~v~d~~-~~i~~~-------d~~~g~~~~~~~~~~-----------------~~~~~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 95 YIVDCY-YHLSVV-------GSEGGHATQLATSVD-----------------GVPFKWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp EEEETT-TEEEEE-------CTTCEECEEEESEET-----------------TEECSCEEEEEECTTTCCEEEEESCSSC
T ss_pred EEEECC-CCEEEE-------eCCCCEEEEecccCC-----------------CCcccccceEEEecCCCEEEEECCcccc
Confidence 999987 458888 444 44445543110 12467899999999 9999999964
Q ss_pred ---------------C-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--C
Q psy4832 312 ---------------N-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--D 371 (770)
Q Consensus 312 ---------------~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~ 371 (770)
. |.+++++ +.+..+. ..+..|.+|++++ +|+ |||+| +
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~----------------------~~~~~p~gia~~~-dg~~lyv~d~~~ 206 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL----------------------KELHVPGGAEVSA-DSSFVLVAEFLS 206 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE----------------------EEESCCCEEEECT-TSSEEEEEEGGG
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEec----------------------cCCccCcceEECC-CCCEEEEEeCCC
Confidence 1 6677765 4444332 1366899999999 765 99999 5
Q ss_pred CEEEEEcCCCc----EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCC
Q psy4832 372 RVIFKLTNDLK----VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADID 447 (770)
Q Consensus 372 ~~I~~i~~~G~----v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~ 447 (770)
++|++++.++. .+.+. . +..|.+|++|++|+|||++..
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~------------------------------------~--~~gP~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLV------------------------------------K--IPNPGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEE------------------------------------E--CSSEEEEEECTTSCEEEEEEE
T ss_pred CeEEEEECCCCcCCccceEE------------------------------------e--CCCCCCeEECCCCCEEEEecC
Confidence 89999987652 11111 0 112999999999999999976
Q ss_pred C-------CceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 448 A-------RKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 448 ~-------~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
. ..-.+|.+++++|++........ + ..+..|.+++. .+|.|||++..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~--------------------g-----~~~~~~~~~~~-~~g~L~v~~~~ 302 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEFGNILEVIPLPP--------------------P-----FAGEHFEQIQE-HDGLLYIGTLF 302 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTTSCEEEEEECCT--------------------T-----TTTSCCCEEEE-ETTEEEEECSS
T ss_pred cccccccCCCccEEEEECCCCCEEEEEECCC--------------------C-----CccccceEEEE-eCCEEEEeecC
Confidence 1 00135788999998765543220 0 01566888887 58899999999
Q ss_pred CceEEeeecC
Q psy4832 521 SLHILALQHY 530 (770)
Q Consensus 521 ~~~I~~i~~~ 530 (770)
+++|.++...
T Consensus 303 ~~~i~~~~~~ 312 (322)
T 2fp8_A 303 HGSVGILVYD 312 (322)
T ss_dssp CSEEEEEEC-
T ss_pred CCceEEEecc
Confidence 9999988653
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.82 E-value=1.1e-18 Score=180.93 Aligned_cols=232 Identities=19% Similarity=0.298 Sum_probs=166.5
Q ss_pred cCCCeEEECCCccEEe-cccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC-ceEEEEcCC
Q psy4832 130 FHEGILQKGDGSSLHL-KHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF-NLVRRLTPE 207 (770)
Q Consensus 130 ~~~gil~~~dG~~~~~-~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~-~~I~~i~~~ 207 (770)
.|.+++...+|. +|+ ++...+.|..+...+..... .....+..|.+|+++++|+|||++. ++|.+++++
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTV--------LPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EE--------CCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTT
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccce--------EeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCC
Confidence 788999999995 888 76567788777643322111 0123456899999999999999996 699999999
Q ss_pred CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccc
Q psy4832 208 GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPAL 287 (770)
Q Consensus 208 G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~ 287 (770)
|.....+. ...+..|.+|++++ +|+|||++..+++|++++. ........ .
T Consensus 96 ~~~~~~~~--~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~-------~~~~~~~~--------------------~ 145 (270)
T 1rwi_B 96 SNNQTVLP--FDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAA-------GSKTQTVL--------------------P 145 (270)
T ss_dssp CSCCEECC--CCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECT-------TCCSCEEC--------------------C
T ss_pred CceEeeee--cCCcCCCcceEECC-CCCEEEEECCCCEEEEEEC-------CCceeEee--------------------c
Confidence 87665443 23567899999997 8899999999899999932 11111110 0
Q ss_pred cccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe
Q psy4832 288 AAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS 365 (770)
Q Consensus 288 ~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~ 365 (770)
...+..|.+|+++++|+|||++..+ |++++.++........ ..+..|.+|++++ +|+
T Consensus 146 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~p~~i~~d~-~g~ 204 (270)
T 1rwi_B 146 FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF--------------------TDITAPWGIAVDE-AGT 204 (270)
T ss_dssp CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC--------------------SSCCSEEEEEECT-TCC
T ss_pred cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc--------------------cCCCCceEEEECC-CCC
Confidence 1125579999999999999999754 9999988643322211 1246799999999 899
Q ss_pred EEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEE
Q psy4832 366 LHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYI 443 (770)
Q Consensus 366 lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyV 443 (770)
|||++ +++|.++++++....... ...+..|.+|+++++|+|||
T Consensus 205 l~v~~~~~~~v~~~~~~~~~~~~~~-----------------------------------~~~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTTSTVLP-----------------------------------FTGLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp EEEEETTTSCEEEECTTCSCCEECC-----------------------------------CCSCSCEEEEEECTTCCEEE
T ss_pred EEEEECCCCcEEEEcCCCCcceeec-----------------------------------cCCCCCceeEEECCCCCEEE
Confidence 99999 679999998775332210 01245699999999999999
Q ss_pred EeCCCCceeeEEEEcC
Q psy4832 444 ADIDARKVNALRVIDS 459 (770)
Q Consensus 444 aD~~~~ri~~i~~i~~ 459 (770)
++..+++ |+.++.
T Consensus 250 ~~~~~~~---v~~~~~ 262 (270)
T 1rwi_B 250 ADRGNDR---VVKLTS 262 (270)
T ss_dssp EEGGGTE---EEEECC
T ss_pred EECCCCE---EEEEcC
Confidence 9999886 455543
No 38
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.79 E-value=2.2e-17 Score=175.51 Aligned_cols=233 Identities=17% Similarity=0.184 Sum_probs=164.5
Q ss_pred cCceEEEEcCCCCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCC--cEEEEEeccCCc
Q psy4832 180 LTPVALTSGPDGSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEK--HQILRVLSLESV 255 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~--~~I~~i~~~~~~ 255 (770)
..|.+++++++|+|||+|. ++|.+++++|++..++..+ ..|.+|++++ +|+|||+|..+ .+|++++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~----~~p~gia~~~-dG~l~vad~~~~~~~v~~~d----- 101 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVE----GKVSGLAFTS-NGDLVATGWNADSIPVVSLV----- 101 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECS----SEEEEEEECT-TSCEEEEEECTTSCEEEEEE-----
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCC----CCceeEEEcC-CCcEEEEeccCCcceEEEEc-----
Confidence 5799999999999999996 5999999999887776532 4699999997 78899999764 4588874
Q ss_pred cCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCC---cEEEeecCCC
Q psy4832 256 ADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEG---IIHTLIGHHK 330 (770)
Q Consensus 256 ~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G---~i~t~~g~~~ 330 (770)
..+|.++.++.... ...|.|+++.+++.+|++|..+ |+++++++ .+....+...
T Consensus 102 -~~~g~~~~~~~~~~--------------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 102 -KSDGTVETLLTLPD--------------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp -CTTSCEEEEEECTT--------------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred -CCCCeEEEEEeCCC--------------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence 35677776654211 2357889888888899999644 99999764 2322222110
Q ss_pred CCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 331 HHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
.. .....+..|.+| ++.++.|||+| +++|++++.++. |.....
T Consensus 161 ~~-------------~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~-----g~~~~~--------------- 205 (306)
T 2p4o_A 161 RS-------------NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST-----DKPGEP--------------- 205 (306)
T ss_dssp CS-------------STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT-----SCBCCC---------------
T ss_pred cc-------------cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC-----CCCCcc---------------
Confidence 00 011246789999 55256899999 589999986531 100000
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccC
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKN 488 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~ 488 (770)
.....+..|.+|++|++|+|||++..+++ |.+++++|++..+....
T Consensus 206 -------------~~~~~~~~P~gi~vd~dG~l~va~~~~~~---V~~~~~~G~~~~~~~~~------------------ 251 (306)
T 2p4o_A 206 -------------EIFVEQTNIDDFAFDVEGNLYGATHIYNS---VVRIAPDRSTTIIAQAE------------------ 251 (306)
T ss_dssp -------------EEEEESCCCSSEEEBTTCCEEEECBTTCC---EEEECTTCCEEEEECGG------------------
T ss_pred -------------EEEeccCCCCCeEECCCCCEEEEeCCCCe---EEEECCCCCEEEEeecc------------------
Confidence 00112357999999999999999998875 67889999876554221
Q ss_pred ccCcccccceecCCeeEEEEc---CC-CcEEEEcCCC
Q psy4832 489 SKETLLTSTARFTSISALSVS---PD-GVVNVADQGS 521 (770)
Q Consensus 489 ~~d~~~~~~~~l~~P~giav~---~d-G~lyvaD~~~ 521 (770)
..+..|.+++++ +| +.|||++..+
T Consensus 252 ---------~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 ---------QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ---------GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ---------cccCCceEEEEecccCCCCEEEEECCCC
Confidence 114569999998 77 5899998764
No 39
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.78 E-value=5.1e-17 Score=176.24 Aligned_cols=269 Identities=16% Similarity=0.208 Sum_probs=166.2
Q ss_pred cccCceEEEEcCCCCEEEEeC-ceEEEEcCCCcEEEEeccC--cccccceeEEEEeCC---CCcEEEEeCC---C----c
Q psy4832 178 RLLTPVALTSGPDGSLYVGDF-NLVRRLTPEGNVFTVLQLS--ATQVSYQYYLALSPA---DGHLYISDAE---K----H 244 (770)
Q Consensus 178 ~l~~P~~la~~~dG~lyv~d~-~~I~~i~~~G~v~~~~~~~--~~~~~~p~~lav~p~---~g~lyvsd~~---~----~ 244 (770)
.|..|++|+++|+|.|||++. ++|++++++|+ ..+.... ......|.+|+++|. ++.|||++.. + +
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 478899999999999999998 69999998897 4444321 234567999999986 6999999874 3 7
Q ss_pred EEEEEeccCCccCCCCc---EEEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC---------
Q psy4832 245 QILRVLSLESVADPSIN---WEVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT--------- 311 (770)
Q Consensus 245 ~I~~i~~~~~~~~~~g~---~~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~--------- 311 (770)
+|.+++.... ++. .+++. +.. ......|.+|+++++|.|||+...
T Consensus 106 ~v~r~~~~~~----~~~~~~~~~l~~~~~------------------~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d 163 (354)
T 3a9g_A 106 RVIRGRLDGS----TFKLKEVKTLIDGIP------------------GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQD 163 (354)
T ss_dssp EEEEEEECSS----SCCEEEEEEEEEEEE------------------CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTC
T ss_pred EEEEEEECCC----CcCcCccEEEEEcCC------------------CCCCcCCceEEECCCCcEEEEECCCCCCccccC
Confidence 8999964321 111 22222 110 012456889999999999999642
Q ss_pred ------CeEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC-----CEEEEEcCC
Q psy4832 312 ------NIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD-----RVIFKLTND 380 (770)
Q Consensus 312 ------~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~-----~~I~~i~~~ 380 (770)
.|.+++++|.+. .. .|. .........+..|.||++++.+|.||++|+ ..|.++.+.
T Consensus 164 ~~~~~G~I~ri~~dG~~p---~~-------npf---~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G 230 (354)
T 3a9g_A 164 LSSLAGKILRVDEEGRPP---AD-------NPF---PNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG 230 (354)
T ss_dssp TTCCSSEEEEECTTSCCC---TT-------SSS---TTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT
T ss_pred CCCCCeEEEEEcCCCCCC---CC-------CCC---CCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC
Confidence 277888877531 00 010 011222345789999999997789999994 245555432
Q ss_pred CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccc-cccCCeeEEEE-------cCCCCEEEEeCCCCcee
Q psy4832 381 LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASN-MDLGSLTALAF-------SPTGDLYIADIDARKVN 452 (770)
Q Consensus 381 G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~l~~P~giav-------d~~G~lyVaD~~~~ri~ 452 (770)
+. .|.|.... ....+ .+. ...... ..-..|.|+++ +.+|.|||++...++|.
T Consensus 231 ~n----yGwp~~~g--~~~~~------------~~~--~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~ 290 (354)
T 3a9g_A 231 GN----YGWPLATG--KAGRG------------EFV--DPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLA 290 (354)
T ss_dssp CB----CCTTTCCS--CCCCT------------TSC--CCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEE
T ss_pred Cc----CCCCcccC--CCCCC------------CCc--CCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEE
Confidence 21 22221110 00000 000 000000 12357999999 56899999999988765
Q ss_pred eEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCC-Cc---------
Q psy4832 453 ALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQG-SL--------- 522 (770)
Q Consensus 453 ~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~-~~--------- 522 (770)
++.. +.+|.+.... ..+. ..+..|.+|+++|||.|||++.. ++
T Consensus 291 ~~~~-~~~g~~~~~~------------------------~~~~--~~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g 343 (354)
T 3a9g_A 291 AVNF-GDNMEVRKIS------------------------TFFK--NVFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDD 343 (354)
T ss_dssp EEEE-CGGGCEEEEE------------------------EECT--TTSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCS
T ss_pred EEEE-CCCCccccee------------------------eecc--CCCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCC
Confidence 4432 3344432110 0000 01457999999999999999863 43
Q ss_pred eEEeeec
Q psy4832 523 HILALQH 529 (770)
Q Consensus 523 ~I~~i~~ 529 (770)
+|+||.+
T Consensus 344 ~i~ri~~ 350 (354)
T 3a9g_A 344 KILKIVS 350 (354)
T ss_dssp CEEEEEE
T ss_pred EEEEEec
Confidence 6666654
No 40
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.78 E-value=3.6e-17 Score=177.51 Aligned_cols=270 Identities=23% Similarity=0.277 Sum_probs=159.1
Q ss_pred cccCceEEEEcCCCCEEEEeC-ceEEEEcCCCcEEEEeccC--cccccceeEEEEeCC---CCcEEEEeCCC-----cEE
Q psy4832 178 RLLTPVALTSGPDGSLYVGDF-NLVRRLTPEGNVFTVLQLS--ATQVSYQYYLALSPA---DGHLYISDAEK-----HQI 246 (770)
Q Consensus 178 ~l~~P~~la~~~dG~lyv~d~-~~I~~i~~~G~v~~~~~~~--~~~~~~p~~lav~p~---~g~lyvsd~~~-----~~I 246 (770)
.|..|++|+++|+|.|||++. ++|++++ +|+...+.... ......|.+|+++|. ++.|||++... ++|
T Consensus 29 ~l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CCSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 478899999999999999998 6999998 88766554432 234678999999985 58999999864 789
Q ss_pred EEEeccCCccCCCCcEEEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC--------------
Q psy4832 247 LRVLSLESVADPSINWEVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-------------- 311 (770)
Q Consensus 247 ~~i~~~~~~~~~~g~~~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-------------- 311 (770)
.+++..... . ...+++. +... .......|.+|+++++|.|||++..
T Consensus 108 ~r~~~~~~~--~-~~~~~l~~~~p~----------------~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~ 168 (352)
T 2ism_A 108 VRLRHLGER--G-VLDRVVLDGIPA----------------RPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLG 168 (352)
T ss_dssp EEEEECSSC--E-EEEEEEEEEECC----------------CTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSS
T ss_pred EEEEeCCCC--c-CceEEEEEeCCC----------------CCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCc
Confidence 999642110 0 0122222 1110 0112457899999999999999742
Q ss_pred -CeEEECCCCcEEEeecCCCCCCCcCCCccC--CCcccccccccCcceEEEeCCCCeEEEEeC--CEEEEEcCCCcEEEE
Q psy4832 312 -NIRVVSPEGIIHTLIGHHKHHNIWSPFNCH--RSFPASTAQLQWPTGLALSPLDDSLHFIDD--RVIFKLTNDLKVKIV 386 (770)
Q Consensus 312 -~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~--~~~~~~~~~l~~P~gla~d~~~g~lyv~D~--~~I~~i~~~G~v~~v 386 (770)
.|.+++++|.+.. +. |+... .........+.+|.+|+++|.+|.||++|. +.+.. .+..++..+
T Consensus 169 g~I~ri~~dG~~p~--~n--------pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~-~~~dei~~i 237 (352)
T 2ism_A 169 GKILRLTPEGEPAP--GN--------PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQG-YGHDEVNLI 237 (352)
T ss_dssp SEEEEECTTSSBCT--TC--------TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC-------CCCEEEEE
T ss_pred eEEEEEcCCCCCCC--CC--------cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCC-CCCeEEEEe
Confidence 2788888874311 00 11000 011122345788999999997789999993 33211 111122222
Q ss_pred e-----cCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCC
Q psy4832 387 A-----GIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTG 461 (770)
Q Consensus 387 a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G 461 (770)
. |.|.... ....+ .+ ............|.||++ .+|.|||++..+++|.++.. +.++
T Consensus 238 ~~G~nyGwp~~~g--~~~~~------------~~--~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~-~~~~ 299 (352)
T 2ism_A 238 VPGGNYGWPRVVG--RGNDP------------RY--RDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVL-EGER 299 (352)
T ss_dssp CTTCBCCTTTCCS--CCCCT------------TS--CCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEE-EEET
T ss_pred ccCCcCCCCcccC--CCCCC------------CC--cCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEE-CCCC
Confidence 2 1111100 00000 00 000001122357999999 68999999999987655533 2233
Q ss_pred cEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 462 RMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 462 ~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
....+. .. ...+ ..+.+|.+|+++|||.|||++..
T Consensus 300 ~~~~~~-~~--------------------~~~~---~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 300 GRWRVL-RV--------------------ETAL---SGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp TEEEEE-EE--------------------EEEE---ESSCCEEEEEECTTSCEEEEECS
T ss_pred cceeec-ch--------------------heec---ccCCCeeEEEECCCCcEEEEEeC
Confidence 211010 00 0001 12457999999999999999865
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.75 E-value=1.6e-18 Score=204.73 Aligned_cols=233 Identities=18% Similarity=0.171 Sum_probs=165.5
Q ss_pred EcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEE
Q psy4832 187 SGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAV 266 (770)
Q Consensus 187 ~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~va 266 (770)
+++...|+++..+.|++++.++...+.+ ...+..|.+|++++.++.|||+|..+++|++++. ++.. .
T Consensus 374 ~~~~~~ll~~~~~~I~~id~~~~~~~~~---~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~-------~g~~---~ 440 (699)
T 1n7d_A 374 VGSIAYLFFTNRHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL-------DRAH---G 440 (699)
T ss_dssp CSSCCCBCCCCTTC-CEECTTSCCEECC---SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEES-------CCCC---C
T ss_pred cccceeEEecCccceEEEeCCCCcceee---eccCcceEEEccccccCeEEEEecCCCeEEEEec-------CCCC---C
Confidence 4566778888888999999887543322 2357789999999888999999999999999953 3210 0
Q ss_pred CCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCC
Q psy4832 267 GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRS 343 (770)
Q Consensus 267 G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~ 343 (770)
+... .......+..|.|||+|. .++|||+|..+ |.+++.+|...+.+...
T Consensus 441 ~~~~-------------~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~-------------- 493 (699)
T 1n7d_A 441 VSSY-------------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------------- 493 (699)
T ss_dssp -CCC-------------CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC--------------
T ss_pred Ccce-------------EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC--------------
Confidence 0000 011123366899999994 78899999765 99999998644433221
Q ss_pred cccccccccCcceEEEeCCCCeEEEEeC---CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcc
Q psy4832 344 FPASTAQLQWPTGLALSPLDDSLHFIDD---RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSV 420 (770)
Q Consensus 344 ~~~~~~~l~~P~gla~d~~~g~lyv~D~---~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (770)
.+..|.+||++|..+.|||+|. ++|++++.+|....++.
T Consensus 494 ------~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~-------------------------------- 535 (699)
T 1n7d_A 494 ------QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-------------------------------- 535 (699)
T ss_dssp ------SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES--------------------------------
T ss_pred ------CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE--------------------------------
Confidence 2567999999997789999992 68999988875433221
Q ss_pred cccccccCCeeEEEEcCC-CCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCccccccee
Q psy4832 421 RASNMDLGSLTALAFSPT-GDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTAR 499 (770)
Q Consensus 421 ~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 499 (770)
...|..|+|||+|++ +.|||+|..+++ |.+++.+|........ ....
T Consensus 536 ---~~~l~~PnGlavd~~~~~LY~aD~~~~~---I~~~d~dG~~~~~~~~--------------------------~~~~ 583 (699)
T 1n7d_A 536 ---TENIQWPNGITLDLLSGRLYWVDSKLHS---ISSIDVNGGNRKTILE--------------------------DEKR 583 (699)
T ss_dssp ---CSSCSSCCCEEECTTTCCEEEEETTTTE---EEEECSSSSCCEEECC--------------------------CSSS
T ss_pred ---eCCCCCccEEEEeccCCEEEEEecCCCe---EEEEccCCCceEEEEe--------------------------cCCc
Confidence 123567999999985 789999998875 7788887743222211 1123
Q ss_pred cCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 500 FTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 500 l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
+..|.+|+++.+ .|||+|..+++|+++.+.
T Consensus 584 ~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 584 LAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 678999999876 899999999999999764
No 42
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.74 E-value=4.9e-18 Score=200.44 Aligned_cols=203 Identities=17% Similarity=0.212 Sum_probs=148.2
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCC----cE-EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEE
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEG----NV-FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILR 248 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G----~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~ 248 (770)
..+..|.+|++++ ++.|||+|. ++|++++.+| .. ..++ ...+..|.+||+++.+++|||+|..+++|.+
T Consensus 403 ~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i---~~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 403 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC---CSCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE---eCCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 3467899999998 678999997 5999999886 22 2222 3457789999999888999999999999999
Q ss_pred EeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC---eEEECCCCcEEE
Q psy4832 249 VLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN---IRVVSPEGIIHT 324 (770)
Q Consensus 249 i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~---Ir~id~~G~i~t 324 (770)
+ +++|....+... ..+..|.+||+|+ .|.|||+|... |.+++.+|...+
T Consensus 480 ~-------d~dg~~~~~l~~--------------------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 480 A-------DTKGVKRKTLFR--------------------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp E-------BSSSCCEEEECC--------------------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC
T ss_pred E-------ecCCCceEEEEe--------------------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee
Confidence 9 455553332211 1255799999998 67899999643 888888875443
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEE-EEecCCCCCCCCCCCCc
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVK-IVAGIPLHCRTGDKDKR 401 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~-~vaG~~~~~~~~~~~~~ 401 (770)
++.. ..|.+|.|||+++.++.|||+| +++|++++.+|..+ +++..
T Consensus 533 ~l~~--------------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~------------ 580 (699)
T 1n7d_A 533 SLVT--------------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED------------ 580 (699)
T ss_dssp EESC--------------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCC------------
T ss_pred EEEe--------------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEec------------
Confidence 3321 1477999999998678999999 58999999887533 33211
Q ss_pred cccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEEEee
Q psy4832 402 DFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMFDFA 467 (770)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~~~a 467 (770)
...+..|.||+++.+ .|||+|+.+++ |.++++ +|+.....
T Consensus 581 ----------------------~~~~~~P~glavd~~-~lywtd~~~~~---V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 581 ----------------------EKRLAHPFSLAVFED-KVFWTDIINEA---IFSANRLTGSDVNLL 621 (699)
T ss_dssp ----------------------SSSCSSCCCCEEETT-EEEEECSTTTC---EEEEETTTEEEEECC
T ss_pred ----------------------CCcCCCceEeEEECC-EEEEEeCCCCe---EEEEEccCCCceEEe
Confidence 123567999999864 89999999886 566665 67655443
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=2.3e-15 Score=158.55 Aligned_cols=230 Identities=18% Similarity=0.242 Sum_probs=166.7
Q ss_pred ccccCceEEEEcCCCC-EEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccC
Q psy4832 177 ARLLTPVALTSGPDGS-LYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLE 253 (770)
Q Consensus 177 ~~l~~P~~la~~~dG~-lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~ 253 (770)
..+..|.+++++|+|+ ||+++. +.|.++++++. ...+. .....|.+|++++ +|.||+++...++|.++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~---~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~---- 95 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM---HPSHHQNGHCLNK-QGHLIACSHGLRRLERQ---- 95 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE---SSCSSEEEEEECT-TCCEEEEETTTTEEEEE----
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE---CCCCCcceeeECC-CCcEEEEecCCCeEEEE----
Confidence 3466799999999998 899886 59999999877 44442 2345699999997 89999999988999999
Q ss_pred CccCC-CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC------------------C-Ce
Q psy4832 254 SVADP-SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG------------------T-NI 313 (770)
Q Consensus 254 ~~~~~-~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~------------------~-~I 313 (770)
++ +|.+..+..... ...+..|.+|+++++|+|||+|. . .|
T Consensus 96 ---d~~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 96 ---REPGGEWESIADSFE-----------------GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp ---CSTTCCEEEEECEET-----------------TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred ---cCCCCcEEEEeeccC-----------------CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 44 677666543100 12356799999999999999864 1 38
Q ss_pred EEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC--CCcE---EEE
Q psy4832 314 RVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN--DLKV---KIV 386 (770)
Q Consensus 314 r~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~--~G~v---~~v 386 (770)
++++++|.+..+.. .+..|.+|+++| +|++++++ +++|++++. +|.+ ..+
T Consensus 156 ~~~~~~g~~~~~~~----------------------~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 156 FRLAPDGTLSAPIR----------------------DRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp EEECTTSCEEEEEC----------------------CCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEE
T ss_pred EEECCCCCEEEeec----------------------CCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeE
Confidence 88988887766542 245789999999 88766888 478988874 5665 222
Q ss_pred ecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEe
Q psy4832 387 AGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDF 466 (770)
Q Consensus 387 aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~ 466 (770)
. .. ....|.+|++|++|+|||+. ++ .|.+++++|+....
T Consensus 213 ~-~~-----------------------------------~~~~p~~i~~d~~G~l~v~~--~~---~v~~~~~~g~~~~~ 251 (296)
T 3e5z_A 213 F-TV-----------------------------------EPGKTDGLRVDAGGLIWASA--GD---GVHVLTPDGDELGR 251 (296)
T ss_dssp E-CC-----------------------------------SSSCCCSEEEBTTSCEEEEE--TT---EEEEECTTSCEEEE
T ss_pred e-eC-----------------------------------CCCCCCeEEECCCCCEEEEc--CC---eEEEECCCCCEEEE
Confidence 2 11 12358999999999999999 33 47888998876543
Q ss_pred ecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEE-cCCC-cEEEEcCCCceEEeeecCC
Q psy4832 467 AGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSV-SPDG-VVNVADQGSLHILALQHYL 531 (770)
Q Consensus 467 aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav-~~dG-~lyvaD~~~~~I~~i~~~~ 531 (770)
.... -. |.++++ +++| .|||+.. ..+.++....
T Consensus 252 ~~~~-----------------------------~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~ 286 (296)
T 3e5z_A 252 VLTP-----------------------------QT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNV 286 (296)
T ss_dssp EECS-----------------------------SC-CCEEEEESTTSCEEEEEET--TEEEEEECSC
T ss_pred EECC-----------------------------CC-ceeEEEECCCCCEEEEEcC--CeEEEEEccc
Confidence 3211 12 677888 4676 5898875 3677776543
No 44
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.73 E-value=1.7e-15 Score=160.19 Aligned_cols=242 Identities=14% Similarity=0.192 Sum_probs=170.3
Q ss_pred ccccCceEEEEcCCCCEEEE-------eC--ceEEEEcC-CCcEEEEecc-CcccccceeEEEEeCCCCcEEEEeCCCcE
Q psy4832 177 ARLLTPVALTSGPDGSLYVG-------DF--NLVRRLTP-EGNVFTVLQL-SATQVSYQYYLALSPADGHLYISDAEKHQ 245 (770)
Q Consensus 177 ~~l~~P~~la~~~dG~lyv~-------d~--~~I~~i~~-~G~v~~~~~~-~~~~~~~p~~lav~p~~g~lyvsd~~~~~ 245 (770)
..|..|.+++++++|.||++ +. +.|.++++ +|++..+... .......|.++++++.+|+|||++..+ .
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~ 93 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-G 93 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-E
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-C
Confidence 45778999999999999999 54 58999994 6777654320 001235689999997339999999854 8
Q ss_pred EEEEeccCCccCCCCcEEEE-ECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-------------
Q psy4832 246 ILRVLSLESVADPSINWEVA-VGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT------------- 311 (770)
Q Consensus 246 I~~i~~~~~~~~~~g~~~~v-aG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~------------- 311 (770)
|++++ ++|.+..+ ..... ...+..|.+|++|++|+|||++..
T Consensus 94 l~~~d-------~~g~~~~~~~~~~~-----------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 94 LLVVQ-------TDGTFEEIAKKDSE-----------------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp EEEEE-------TTSCEEECCSBCTT-----------------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred EEEEe-------CCCCEEEEEeccCC-----------------CccccCCcCEEECCCCCEEEEecCccccccccccccc
Confidence 88884 44665543 22100 012457999999999999999863
Q ss_pred ----CeEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEe----CCCC-eEEEEe--CCEEEEEcC-
Q psy4832 312 ----NIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALS----PLDD-SLHFID--DRVIFKLTN- 379 (770)
Q Consensus 312 ----~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d----~~~g-~lyv~D--~~~I~~i~~- 379 (770)
.|.+++++|.+..+.. .+..|.+++++ + ++ .|||++ +++|++++.
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~----------------------~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDT----------------------AFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEE----------------------EESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEecc----------------------CCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECC
Confidence 3888888787665432 24568999999 9 77 699998 478999884
Q ss_pred -CCcEE---EEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEE
Q psy4832 380 -DLKVK---IVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALR 455 (770)
Q Consensus 380 -~G~v~---~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~ 455 (770)
+|++. .+...+. ..+..|.+|++|++|+|||++..+++ |.
T Consensus 207 ~~g~~~~~~~~~~~~~---------------------------------~~~~~p~~i~~d~~G~l~v~~~~~~~---i~ 250 (314)
T 1pjx_A 207 GPAKIENKKVWGHIPG---------------------------------THEGGADGMDFDEDNNLLVANWGSSH---IE 250 (314)
T ss_dssp ETTEEEEEEEEEECCC---------------------------------CSSCEEEEEEEBTTCCEEEEEETTTE---EE
T ss_pred CCCccccceEEEECCC---------------------------------CCCCCCCceEECCCCCEEEEEcCCCE---EE
Confidence 45432 1111100 00145899999999999999977664 67
Q ss_pred EEcCC-CcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEeeecCC
Q psy4832 456 VIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILALQHYL 531 (770)
Q Consensus 456 ~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i~~~~ 531 (770)
+++++ |++....... ...|.+++++++|. |||++..++.|.++....
T Consensus 251 ~~d~~~g~~~~~~~~~-----------------------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCP-----------------------------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEECS-----------------------------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeCC-----------------------------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 78876 6542222111 14589999999998 999999888998887643
No 45
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.72 E-value=4.6e-16 Score=168.77 Aligned_cols=286 Identities=18% Similarity=0.193 Sum_probs=169.8
Q ss_pred cccCceEEEEcCCCC-EEEEeC-ceEEEEcCCCcEEEEe-ccC---cccccceeEEEEeCC---CCcEEEEeCC------
Q psy4832 178 RLLTPVALTSGPDGS-LYVGDF-NLVRRLTPEGNVFTVL-QLS---ATQVSYQYYLALSPA---DGHLYISDAE------ 242 (770)
Q Consensus 178 ~l~~P~~la~~~dG~-lyv~d~-~~I~~i~~~G~v~~~~-~~~---~~~~~~p~~lav~p~---~g~lyvsd~~------ 242 (770)
.|..|++|+++|+|+ |||++. ++|++++++|...+.+ +.. ......|.+|+++|. ++.|||++..
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 578999999999999 999998 5999999888765322 221 123456899999986 7999999865
Q ss_pred -CcEEEEEeccCCccCCCCc---EEEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC------
Q psy4832 243 -KHQILRVLSLESVADPSIN---WEVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT------ 311 (770)
Q Consensus 243 -~~~I~~i~~~~~~~~~~g~---~~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~------ 311 (770)
.++|.+++.... ++. .+++. +... .......|.+|+++++|.|||+...
T Consensus 96 ~~~~v~r~~~~~~----~~~~~~~~~i~~~~p~----------------~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~ 155 (353)
T 2g8s_A 96 AGTAVGYGRLSDD----LSKVTDFRTVFRQMPK----------------LSTGNHFGGRLVFDGKGYLFIALGENNQRPT 155 (353)
T ss_dssp EEEEEEEEEECTT----SSBEEEEEEEEECSSC----------------CBSSSCCCCCEEECSSSEEEEEECCTTCGGG
T ss_pred ceeEEEEEEECCC----CCCCCceEEEEEECCC----------------CCCCcccCccEEECCCCcEEEEECCCCCCCc
Confidence 468888854211 111 22222 2110 0112446889999999999999632
Q ss_pred ---------CeEEECCCCcEEEeecCCCCCCCcCCCccCC--CcccccccccCcceEEEeCCCCeEEEEeCC-----EEE
Q psy4832 312 ---------NIRVVSPEGIIHTLIGHHKHHNIWSPFNCHR--SFPASTAQLQWPTGLALSPLDDSLHFIDDR-----VIF 375 (770)
Q Consensus 312 ---------~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~--~~~~~~~~l~~P~gla~d~~~g~lyv~D~~-----~I~ 375 (770)
.|.+++++|.+.. +. |+.... ....-...+.+|.+|++++.+|.||++|++ .|.
T Consensus 156 ~q~~~~~~g~I~ri~~dG~~p~--~n--------pf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~ 225 (353)
T 2g8s_A 156 AQDLDKLQGKLVRLTDQGEIPD--DN--------PFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEIN 225 (353)
T ss_dssp GGCTTSCTTEEEEEETTSCCCT--TC--------TTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEE
T ss_pred cCCCCCCCeEEEEECCCCCCCC--CC--------CCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEe
Confidence 2888888875311 11 110000 112223457899999999877999999943 565
Q ss_pred EEcCCCcEEEEecCCCCCCC-CCCCCccccccccccccccccCCcccccccccCCeeEEEEcC-------CCCEEEEeCC
Q psy4832 376 KLTNDLKVKIVAGIPLHCRT-GDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSP-------TGDLYIADID 447 (770)
Q Consensus 376 ~i~~~G~v~~vaG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~-------~G~lyVaD~~ 447 (770)
+|.+.+. .|.|..... ...+....... ......+ ............|.|+++.. +|.+||+|..
T Consensus 226 ~i~~G~n----yGwp~~~~~~~~~~~~~~~~~--~~~~~~~--~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~ 297 (353)
T 2g8s_A 226 IPQKGKN----YGWPLATWGINYSGFKIPEAK--GEIVAGT--EQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK 297 (353)
T ss_dssp CCCTTCB----CCTTTBCSSBCTTSSCCTTCC--BSSCTTS--CCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT
T ss_pred EeccCCc----CCCCCccCCCCCCCCccCccc--CCCCCCc--cCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc
Confidence 5544332 132221000 00000000000 0000000 00000111124799999963 5899999999
Q ss_pred CCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEE-cCCCceEEe
Q psy4832 448 ARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVA-DQGSLHILA 526 (770)
Q Consensus 448 ~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyva-D~~~~~I~~ 526 (770)
.++|.++..- ++++... . .++. ..+.+|.+|+++|||.|||+ |..+++|+|
T Consensus 298 ~~~v~~~~~~--~~~~~~~---~---------------------~~~~--~~~~rp~~v~~~pdG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 298 DKDVIVMSVN--GDKVTED---G---------------------RILT--DRGQRIRDVRTGPDGYLYVLTDESSGELLK 349 (353)
T ss_dssp TTEEEEEEEE--TTEEEEE---E---------------------EESG--GGCCCEEEEEECTTSCEEEEECSTTEEEEE
T ss_pred CCEEEEEEeC--CCeEeee---E---------------------Eccc--CCCCceeEEEECCCCcEEEEEeCCCCEEEE
Confidence 9876555432 3332111 0 0000 12457999999999999997 768899999
Q ss_pred eec
Q psy4832 527 LQH 529 (770)
Q Consensus 527 i~~ 529 (770)
|.+
T Consensus 350 i~~ 352 (353)
T 2g8s_A 350 VSP 352 (353)
T ss_dssp EEC
T ss_pred EeC
Confidence 865
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.71 E-value=9.6e-16 Score=163.92 Aligned_cols=243 Identities=14% Similarity=0.168 Sum_probs=165.1
Q ss_pred eeecCCCeEEECCCccEEecccCCCeEEEEeccCc-cCCccCC-------CCCc---ccccccccCceEEEEcC-CCCEE
Q psy4832 127 HYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGL-QRPLVCK-------DCDG---VARDARLLTPVALTSGP-DGSLY 194 (770)
Q Consensus 127 ~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~-~~~~~~~-------~~~g---~~~~~~l~~P~~la~~~-dG~ly 194 (770)
.|..|+|++.+.+|..+|+.. ..+.|..+...+. ...+... .|.| ......+..|.+|++++ +|+||
T Consensus 17 ~~~~p~~i~~d~~g~~l~v~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 17 PSYAPNSFTFDSTNKGFYTSV-QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp SSSCCCCEECCTTCSSEEEEC-TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred ccCCceEEEEcCCCCEEEEEc-CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 356799999999986677765 6778888765442 2211100 0111 11223456899999997 89999
Q ss_pred EEeC-ceEEEEcCCCc-EEEEecc-CcccccceeEEEEeCCCCcEEEEeCCC-----------------cEEEEEeccCC
Q psy4832 195 VGDF-NLVRRLTPEGN-VFTVLQL-SATQVSYQYYLALSPADGHLYISDAEK-----------------HQILRVLSLES 254 (770)
Q Consensus 195 v~d~-~~I~~i~~~G~-v~~~~~~-~~~~~~~p~~lav~p~~g~lyvsd~~~-----------------~~I~~i~~~~~ 254 (770)
|+|. +.|.++++++. +..+... ....+..|.+|++++.+|+|||+|..+ ++|++++
T Consensus 96 v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d---- 171 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD---- 171 (322)
T ss_dssp EEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE----
T ss_pred EEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe----
Confidence 9997 47999998854 3444321 123467899999996478999999763 5677773
Q ss_pred ccCCC-CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECCCCc----EEEee
Q psy4832 255 VADPS-INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPEGI----IHTLI 326 (770)
Q Consensus 255 ~~~~~-g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~G~----i~t~~ 326 (770)
++ +.+..+. ..+..|.||+++++|. |||+|..+ |++++.++. ...+.
T Consensus 172 ---~~~~~~~~~~----------------------~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 172 ---PSTKETTLLL----------------------KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp ---TTTTEEEEEE----------------------EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred ---CCCCEEEEec----------------------cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence 32 3343332 1256799999999986 99999764 999987642 22111
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC------------CEEEEEcCCCcEEEEecCCCCCC
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD------------RVIFKLTNDLKVKIVAGIPLHCR 394 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~------------~~I~~i~~~G~v~~vaG~~~~~~ 394 (770)
.+..|.+|++|+ +|+|||++. ++|.+++++|++......+..
T Consensus 227 -----------------------~~~gP~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g-- 280 (322)
T 2fp8_A 227 -----------------------KIPNPGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPP-- 280 (322)
T ss_dssp -----------------------ECSSEEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTT--
T ss_pred -----------------------eCCCCCCeEECC-CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCC--
Confidence 011299999999 999999983 479999999986655432210
Q ss_pred CCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC
Q psy4832 395 TGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS 459 (770)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~ 459 (770)
..+..|.++++ .+|.|||++..+++| .+++.
T Consensus 281 ------------------------------~~~~~~~~~~~-~~g~L~v~~~~~~~i---~~~~~ 311 (322)
T 2fp8_A 281 ------------------------------FAGEHFEQIQE-HDGLLYIGTLFHGSV---GILVY 311 (322)
T ss_dssp ------------------------------TTTSCCCEEEE-ETTEEEEECSSCSEE---EEEEC
T ss_pred ------------------------------CccccceEEEE-eCCEEEEeecCCCce---EEEec
Confidence 01456888887 478999999988864 45444
No 47
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=6.9e-15 Score=158.87 Aligned_cols=261 Identities=13% Similarity=0.168 Sum_probs=169.1
Q ss_pred cCceEEEEcCCCCEEEEeC----c--eEEEEcCCCcEEEEe---ccCcccccceeEEEEeCCCCcEEEEeCC-----CcE
Q psy4832 180 LTPVALTSGPDGSLYVGDF----N--LVRRLTPEGNVFTVL---QLSATQVSYQYYLALSPADGHLYISDAE-----KHQ 245 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d~----~--~I~~i~~~G~v~~~~---~~~~~~~~~p~~lav~p~~g~lyvsd~~-----~~~ 245 (770)
..|.+|+++++|.|||+.. + +|.+++ +|++...- ......+..|++|++++ +|+|||+|.. .++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCCCe
Confidence 4899999999999999963 2 788888 78755321 11234678999999997 7999999987 579
Q ss_pred EEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeC---CC--eEEECCC
Q psy4832 246 ILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADG---TN--IRVVSPE 319 (770)
Q Consensus 246 I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~---~~--Ir~id~~ 319 (770)
|++++. .++.+......+.. . ......|.+|++|+ +|.+||+|. .. |.+++.+
T Consensus 95 i~~~d~------~tg~~~~~~~~~~~-----------~----~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 95 LVAWDT------LNNQLSRVIYLPPP-----------I----TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEEET------TTTEEEEEEECCTT-----------T----SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEEEC------CCCeEEEEEECChh-----------h----cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 999942 23553333321110 0 01134689999996 578999997 43 8889865
Q ss_pred -CcEEEeecCCCCCCCcCCCc----cCCCccc----ccc----cccCcceEEEeCCCC-eEEEEe--CCEEEEEcCC---
Q psy4832 320 -GIIHTLIGHHKHHNIWSPFN----CHRSFPA----STA----QLQWPTGLALSPLDD-SLHFID--DRVIFKLTND--- 380 (770)
Q Consensus 320 -G~i~t~~g~~~~~~~~~p~~----~~~~~~~----~~~----~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~~--- 380 (770)
|.+..+...... ..|.+ .+ +... ... ....|.||+++| +| .||+++ .++|++++.+
T Consensus 154 ~g~~~r~~~~~~~---~~~~~~~~~~~-g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~ 228 (343)
T 2qe8_A 154 TGLAARVLQGYPG---IAPEDIDLVID-GVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLS 228 (343)
T ss_dssp TCCEEEECTTCTT---TSCCSCCCEET-TEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHT
T ss_pred CCCEEEEecCCCc---ccccccceeEC-CEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhc
Confidence 777665532100 00100 00 0000 000 013589999999 76 699998 4689888632
Q ss_pred -CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC
Q psy4832 381 -LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS 459 (770)
Q Consensus 381 -G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~ 459 (770)
+.+. .+... ..+........|.||++|++|+|||++..+++ |.++++
T Consensus 229 ~~~~~--~~~~~---------------------------~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~---V~~~d~ 276 (343)
T 2qe8_A 229 NLQLT--DAELG---------------------------SKIERYSEKPICDGISIDKDHNIYVGDLAHSA---IGVITS 276 (343)
T ss_dssp CTTCC--HHHHH---------------------------TTCEEEEECCSCSCEEECTTCCEEEEEGGGTE---EEEEET
T ss_pred CCCCC--hhhhh---------------------------cceEecccCCCCceEEECCCCCEEEEccCCCe---EEEEEC
Confidence 1100 00000 00000011236999999999999999998875 788888
Q ss_pred -CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeee
Q psy4832 460 -TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 460 -~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~ 528 (770)
+|++.+++... .+..|.+|+++++|.|||++...+++..+.
T Consensus 277 ~~G~~~~~~~~~----------------------------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 277 ADRAYKLLVTDE----------------------------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp TTTEEEEEEECG----------------------------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCCCEEEEEECC----------------------------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 89877765321 256799999999999999998776664443
No 48
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.69 E-value=6.7e-15 Score=156.04 Aligned_cols=224 Identities=17% Similarity=0.206 Sum_probs=161.5
Q ss_pred cccCceEEEEcCCCC-EEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 178 RLLTPVALTSGPDGS-LYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 178 ~l~~P~~la~~~dG~-lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
.+..+.+++++++|+ ||++|. ++|.+++++|.+..+.. ....|.++++++ +|+||+++...++|.++
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~----~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~----- 112 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLD----ATAFTNGNAVDA-QQRLVHCEHGRRAITRS----- 112 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEE----SCSCEEEEEECT-TSCEEEEETTTTEEEEE-----
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeC----CCCccceeeECC-CCCEEEEECCCCEEEEE-----
Confidence 455688999999998 999987 59999999988655432 235689999997 89999999988999999
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-------------------CCeEE
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-------------------TNIRV 315 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-------------------~~Ir~ 315 (770)
+++|.++.++.... ...++.|.+|+++++|+|||+|. ..|++
T Consensus 113 --~~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 113 --DADGQAHLLVGRYA-----------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp --CTTSCEEEEECEET-----------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred --CCCCCEEEEEeccC-----------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 56677776653210 12367899999999999999873 12888
Q ss_pred ECC-CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEeC-------CEEEEEcCCCc-EE-
Q psy4832 316 VSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFIDD-------RVIFKLTNDLK-VK- 384 (770)
Q Consensus 316 id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D~-------~~I~~i~~~G~-v~- 384 (770)
+++ .|.+..+. .+..|.+|+++| ++. |||+|. ++|++++.++. +.
T Consensus 174 ~d~~~g~~~~~~-----------------------~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~ 229 (305)
T 3dr2_A 174 LPPDGSPLQRMA-----------------------DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHD 229 (305)
T ss_dssp ECSSSCCCEEEE-----------------------EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEE
T ss_pred EcCCCCcEEEEe-----------------------cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccC
Confidence 887 46665543 245799999999 775 999984 57888875422 11
Q ss_pred --EEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCc
Q psy4832 385 --IVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGR 462 (770)
Q Consensus 385 --~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~ 462 (770)
.+.. .....|.+|++|++|+||++..+ .|.+++++|+
T Consensus 230 ~~~~~~------------------------------------~~~~~pdgi~~d~~G~lwv~~~~-----gv~~~~~~g~ 268 (305)
T 3dr2_A 230 RRHFAS------------------------------------VPDGLPDGFCVDRGGWLWSSSGT-----GVCVFDSDGQ 268 (305)
T ss_dssp EEEEEC------------------------------------CSSSCCCSEEECTTSCEEECCSS-----EEEEECTTSC
T ss_pred CeEEEE------------------------------------CCCCCCCeEEECCCCCEEEecCC-----cEEEECCCCC
Confidence 1110 01235899999999999999832 3788999887
Q ss_pred EEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEEcCCCceEEee
Q psy4832 463 MFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVADQGSLHILAL 527 (770)
Q Consensus 463 i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyvaD~~~~~I~~i 527 (770)
.......+ ..|.++++++++ .|||+... .+.++
T Consensus 269 ~~~~~~~~------------------------------~~~~~~~f~~d~~~L~it~~~--~l~~~ 302 (305)
T 3dr2_A 269 LLGHIPTP------------------------------GTASNCTFDQAQQRLFITGGP--CLWML 302 (305)
T ss_dssp EEEEEECS------------------------------SCCCEEEECTTSCEEEEEETT--EEEEE
T ss_pred EEEEEECC------------------------------CceeEEEEeCCCCEEEEEcCC--eEEEE
Confidence 64433111 137788998876 68887653 45554
No 49
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.69 E-value=1.6e-14 Score=154.36 Aligned_cols=266 Identities=18% Similarity=0.255 Sum_probs=160.6
Q ss_pred cccccCceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccC---cccccceeEEEEeCC---CCcEEEEeC--CCc
Q psy4832 176 DARLLTPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLS---ATQVSYQYYLALSPA---DGHLYISDA--EKH 244 (770)
Q Consensus 176 ~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~---~~~~~~p~~lav~p~---~g~lyvsd~--~~~ 244 (770)
...|..|++|+++|||.|||++. ++|++++++ |+...+.... ......+.+||++|. ++.|||+.+ ..+
T Consensus 28 a~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 28 ATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred ecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 45688999999999999999997 699999875 6655443321 345678999999984 689999753 567
Q ss_pred EEEEEeccCCcc--CCCCcEEEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-----------
Q psy4832 245 QILRVLSLESVA--DPSINWEVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG----------- 310 (770)
Q Consensus 245 ~I~~i~~~~~~~--~~~g~~~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~----------- 310 (770)
+|.|+.....-. ..-...+++. +. |. ...+.+..|+++++|.|||+-.
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~-----p~-------------~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~ 169 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGI-----PK-------------GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDR 169 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEE-----CC-------------CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCT
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcC-----CC-------------CCCccCccccCCCCCCEEEEECCCCCCccccCC
Confidence 999986532100 0001122222 11 00 1134577899999999999943
Q ss_pred ----CCeEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeCC-----EEEEEcCCC
Q psy4832 311 ----TNIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDR-----VIFKLTNDL 381 (770)
Q Consensus 311 ----~~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~-----~I~~i~~~G 381 (770)
+.|.+++++|.+.. + .|+. ....-...+.+|.+|+++| +|.||++|++ .|.++.+.+
T Consensus 170 ~~~~G~IlRi~~dG~ip~--~--------nPf~---~~~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 170 KSLGGKILRMTPDGEPAP--G--------NPFP---GSPVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGD 235 (347)
T ss_dssp TCSTTCEEEECTTSSBCT--T--------CSST---TCCEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTC
T ss_pred CCCCCEEEEEeCCCCccC--C--------CCCC---CCeEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcCCC
Confidence 22888888875411 0 0110 1122344688999999999 9999999952 455554332
Q ss_pred cEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCC
Q psy4832 382 KVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTG 461 (770)
Q Consensus 382 ~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G 461 (770)
. .|.|.... ....+ .+. ............|.||+|. +|.+|+++..+.+|.++.. +.++
T Consensus 236 n----yGwP~~~g--~~~~~------------~~~-~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~-~~~~ 294 (347)
T 3das_A 236 N----YGWPEAEG--KGGGS------------GFH-DPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPL-KGTA 294 (347)
T ss_dssp B----CCTTTCCS--SCCCT------------TCC-CCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEE-ETTE
T ss_pred E----ecCCcccC--CCCCc------------ccc-CCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEe-cCCc
Confidence 1 23322110 00000 000 0000011112479999996 6899999999988766533 2222
Q ss_pred cEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 462 RMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 462 ~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
. .+.. ..++. ..+.+|.+|+++|||.|||++..
T Consensus 295 ~----~~~~--------------------e~~l~--~~~gR~~dv~~~pDG~lyv~td~ 327 (347)
T 3das_A 295 A----AADP--------------------QAFLE--GEYGRLRTVAPAGGDKLWLVTSN 327 (347)
T ss_dssp E----SSCC--------------------EEEST--TTSSCEEEEEEEETTEEEEEECT
T ss_pred e----ecce--------------------EEeec--CCCCCccEEEECCCCcEEEEEcC
Confidence 1 1110 00111 12467999999999999999643
No 50
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=6.9e-15 Score=158.86 Aligned_cols=261 Identities=16% Similarity=0.151 Sum_probs=168.0
Q ss_pred ecCCCeEEECCCccEEeccc--CC--CeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC------
Q psy4832 129 NFHEGILQKGDGSSLHLKHE--FP--RTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF------ 198 (770)
Q Consensus 129 ~~~~gil~~~dG~~~~~~~~--~~--~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~------ 198 (770)
+.|+||.+..+| .+|++.. .. ..|..+. +|...++++.. ......|..|.+|++|++|.|||+|.
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~---~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELT-QDGLIPFPPQS---GNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEE-TTEEEESCCCC---SSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEEC-CCCeecCCCcc---cCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 489999999999 5787731 11 2566666 66655553211 11235788999999999999999995
Q ss_pred -ceEEEEcCC-CcEEEEeccCc---ccccceeEEEEeCCCCcEEEEeC---CCcEEEEEeccCCccCCCCcEEEEECCCc
Q psy4832 199 -NLVRRLTPE-GNVFTVLQLSA---TQVSYQYYLALSPADGHLYISDA---EKHQILRVLSLESVADPSINWEVAVGSGE 270 (770)
Q Consensus 199 -~~I~~i~~~-G~v~~~~~~~~---~~~~~p~~lav~p~~g~lyvsd~---~~~~I~~i~~~~~~~~~~g~~~~vaG~g~ 270 (770)
.+|.+++++ |++...+..+. .....|.+|++++.++.+||+|. .++.|++++. .++....+.....
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~------~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL------QTGLAARVLQGYP 165 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET------TTCCEEEECTTCT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC------CCCCEEEEecCCC
Confidence 489999975 88666554321 22356899999987789999999 7889999953 2355444432101
Q ss_pred cccCCCCCCcCCCccc--------ccccccCcceEEEccCCc-EEEEeCCC--eEEECC----CCcEEEeecCCCCCCCc
Q psy4832 271 RCIPGDETNCGDNGPA--------LAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSP----EGIIHTLIGHHKHHNIW 335 (770)
Q Consensus 271 ~~~p~~~~~~g~~g~~--------~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~----~G~i~t~~g~~~~~~~~ 335 (770)
.+.+....+.-++... .......|.||+++++|. ||+++... |++++. ++.+. .... +
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~----~~~~---~ 238 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT----DAEL---G 238 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC----HHHH---H
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC----hhhh---h
Confidence 1111000000001000 000113589999999985 99998654 777763 22110 0000 0
Q ss_pred CCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCcccccccccccc
Q psy4832 336 SPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKK 412 (770)
Q Consensus 336 ~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~ 412 (770)
. .. ........|.||++|+ +|+|||++ +++|.++++ +|++.+++..+
T Consensus 239 ~------~~-~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~---------------------- 288 (343)
T 2qe8_A 239 S------KI-ERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDE---------------------- 288 (343)
T ss_dssp T------TC-EEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECG----------------------
T ss_pred c------ce-EecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECC----------------------
Confidence 0 00 0001123699999999 99999999 589999998 89877766321
Q ss_pred ccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCc
Q psy4832 413 STVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARK 450 (770)
Q Consensus 413 ~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~r 450 (770)
.+..|.+|+++++|.|||++...++
T Consensus 289 -------------~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 289 -------------KLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp -------------GGSCEEEEEECTTSCEEEEECCGGG
T ss_pred -------------ceecCCeeEECCCCcEEEEeCcccc
Confidence 2467999999999999999987655
No 51
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.67 E-value=1.6e-14 Score=153.35 Aligned_cols=198 Identities=16% Similarity=0.211 Sum_probs=141.0
Q ss_pred cceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 222 SYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
..|.++++++ +|+|||+|..+++|+++ ++++....++..+ ..|.+|++++
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~-------d~~g~~~~~~~~~----------------------~~p~gia~~~ 81 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSI-------TPDGNQQIHATVE----------------------GKVSGLAFTS 81 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEE-------CTTCCEEEEEECS----------------------SEEEEEEECT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEE-------CCCCceEEEEeCC----------------------CCceeEEEcC
Confidence 5799999997 88999999999999999 5677665554321 1489999999
Q ss_pred CCcEEEEeCC--C--eEEEC-CCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEE
Q psy4832 302 DKTMFIADGT--N--IRVVS-PEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVI 374 (770)
Q Consensus 302 ~G~lYvaD~~--~--Ir~id-~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I 374 (770)
+|+|||+|.. . |.+++ .+|.+..++... ....|.++++.+ ++.+|++| +++|
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~--------------------~~~~~~g~~~~~-~~~~~v~d~~~g~i 140 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLP--------------------DAIFLNGITPLS-DTQYLTADSYRGAI 140 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECT--------------------TCSCEEEEEESS-SSEEEEEETTTTEE
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC--------------------CccccCcccccC-CCcEEEEECCCCeE
Confidence 9999999954 3 77776 678887766431 134578898887 88899999 5899
Q ss_pred EEEcCCC-c--EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCC-CEEEEeCCCCc
Q psy4832 375 FKLTNDL-K--VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTG-DLYIADIDARK 450 (770)
Q Consensus 375 ~~i~~~G-~--v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G-~lyVaD~~~~r 450 (770)
+++++++ . +....+..... .....+..|+|| +++| .|||+|+.+++
T Consensus 141 ~~~d~~~~~~~v~~~~~~~~~~----------------------------~~~~~~~~pngi--s~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 141 WLIDVVQPSGSIWLEHPMLARS----------------------------NSESVFPAANGL--KRFGNFLYVSNTEKML 190 (306)
T ss_dssp EEEETTTTEEEEEEECGGGSCS----------------------------STTCCSCSEEEE--EEETTEEEEEETTTTE
T ss_pred EEEeCCCCcEeEEEECCccccc----------------------------cccCCCCcCCCc--CcCCCEEEEEeCCCCE
Confidence 9999764 2 22222210000 011235679999 5665 59999999886
Q ss_pred eeeEEEEcCC--CcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeee
Q psy4832 451 VNALRVIDST--GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 451 i~~i~~i~~~--G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~ 528 (770)
|.+++.+ |.+ +.. .....+..|.+|+++++|.|||++..+++|.++.
T Consensus 191 ---I~~~~~~~~g~~----~~~------------------------~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 191 ---LLRIPVDSTDKP----GEP------------------------EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp ---EEEEEBCTTSCB----CCC------------------------EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred ---EEEEEeCCCCCC----Ccc------------------------EEEeccCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 5666654 321 000 0012245799999999999999999999999997
Q ss_pred cCC
Q psy4832 529 HYL 531 (770)
Q Consensus 529 ~~~ 531 (770)
+..
T Consensus 240 ~~G 242 (306)
T 2p4o_A 240 PDR 242 (306)
T ss_dssp TTC
T ss_pred CCC
Confidence 653
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=3e-14 Score=150.46 Aligned_cols=226 Identities=12% Similarity=0.073 Sum_probs=159.6
Q ss_pred ccccCceEEEEcC-CCCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccC
Q psy4832 177 ARLLTPVALTSGP-DGSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLE 253 (770)
Q Consensus 177 ~~l~~P~~la~~~-dG~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~ 253 (770)
..+..+.+.++++ ++.||++|. ++|.++++++.....+.. ...|.++++++ +|+||++. .+.|++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~-dG~l~v~~--~~~l~~~d~-- 80 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM----DAPVSSVALRQ-SGGYVATI--GTKFCALNW-- 80 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC----SSCEEEEEEBT-TSSEEEEE--TTEEEEEET--
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC----CCceEEEEECC-CCCEEEEE--CCeEEEEEC--
Confidence 3455688999998 678999997 599999987654444432 24689999997 78899997 468999852
Q ss_pred CccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-------------CeEEECCCC
Q psy4832 254 SVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-------------NIRVVSPEG 320 (770)
Q Consensus 254 ~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-------------~Ir~id~~G 320 (770)
.++.++.++.... ...++.|.+|++|++|+|||++.. .|++++++|
T Consensus 81 ----~~g~~~~~~~~~~-----------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 81 ----KEQSAVVLATVDN-----------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp ----TTTEEEEEEECCT-----------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred ----CCCcEEEEEecCC-----------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 2455655543211 012457899999999999998731 288888888
Q ss_pred cEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEc---CCCcEE---EEecCCC
Q psy4832 321 IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLT---NDLKVK---IVAGIPL 391 (770)
Q Consensus 321 ~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~---~~G~v~---~vaG~~~ 391 (770)
.+..+.. .+..|++|+++| ++ .|||+| +++|++++ .+|.+. .++..+
T Consensus 140 ~~~~~~~----------------------~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~- 195 (297)
T 3g4e_A 140 HVKKYFD----------------------QVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE- 195 (297)
T ss_dssp CEEEEEE----------------------EESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC-
T ss_pred CEEEEee----------------------ccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC-
Confidence 7766442 256799999999 66 599999 58899887 456542 121100
Q ss_pred CCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-CcEEEeecCc
Q psy4832 392 HCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-GRMFDFAGRW 470 (770)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G~i~~~aG~~ 470 (770)
.....|.+|++|++|+|||+...+++ |.+++++ |++......+
T Consensus 196 ---------------------------------~~~~~p~g~~~d~~G~lwva~~~~~~---v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 196 ---------------------------------KEEQIPDGMCIDAEGKLWVACYNGGR---VIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp ---------------------------------GGGCEEEEEEEBTTSCEEEEEETTTE---EEEECTTTCCEEEEEECS
T ss_pred ---------------------------------CCCCCCCeeEECCCCCEEEEEcCCCE---EEEEcCCCceEEEEEECC
Confidence 01245999999999999999998775 7888986 8865443211
Q ss_pred cCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEc-CCC-cEEEEcCCC
Q psy4832 471 QSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVS-PDG-VVNVADQGS 521 (770)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~-~dG-~lyvaD~~~ 521 (770)
-..|.++++. ||+ .|||+....
T Consensus 240 -----------------------------~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 240 -----------------------------VDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------------------------SSBEEEEEEESGGGCEEEEEEBCT
T ss_pred -----------------------------CCCceEEEEeCCCCCEEEEEcCCc
Confidence 1348899997 665 789987543
No 53
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=9.7e-14 Score=146.00 Aligned_cols=193 Identities=17% Similarity=0.220 Sum_probs=141.9
Q ss_pred ccccceeEEEEeCCCCc-EEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceE
Q psy4832 219 TQVSYQYYLALSPADGH-LYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGL 297 (770)
Q Consensus 219 ~~~~~p~~lav~p~~g~-lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gI 297 (770)
..+..|.+++++| +|+ ||+++..+++|++++ +++....+... ...|.+|
T Consensus 25 ~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~-------~~~~~~~~~~~----------------------~~~~~~l 74 (296)
T 3e5z_A 25 DGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWS-------DDGQLSPEMHP----------------------SHHQNGH 74 (296)
T ss_dssp CCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEE-------TTSCEEEEESS----------------------CSSEEEE
T ss_pred cCCccccCCeEeC-CCCEEEEEeCCCCEEEEEE-------CCCCeEEEECC----------------------CCCccee
Confidence 3567899999998 555 999999999999994 44444444321 1258899
Q ss_pred EEccCCcEEEEeCCC--eEEECC-CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC---
Q psy4832 298 AIKADKTMFIADGTN--IRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD--- 371 (770)
Q Consensus 298 avd~~G~lYvaD~~~--Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~--- 371 (770)
+++++|+||+++... |.++++ +|.+..+..... ...+..|.+|++++ +|+|||+|.
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~-~G~l~vtd~~~g 136 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE-----------------GKKLNSPNDVCLAP-DGSLWFSDPTYG 136 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET-----------------TEECCCCCCEEECT-TSCEEEEECSHH
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC-----------------CCCCCCCCCEEECC-CCCEEEECCccc
Confidence 999999999999763 999998 788876653210 12356799999999 999999862
Q ss_pred ----------------CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEE
Q psy4832 372 ----------------RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAF 435 (770)
Q Consensus 372 ----------------~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giav 435 (770)
+.|++++++|++..+.+ .+..|.+|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-------------------------------------~~~~~~gi~~ 179 (296)
T 3e5z_A 137 IDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR-------------------------------------DRVKPNGLAF 179 (296)
T ss_dssp HHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC-------------------------------------CCSSEEEEEE
T ss_pred cccccccccccccCCCcEEEEECCCCCEEEeec-------------------------------------CCCCCccEEE
Confidence 48999998887766542 1345899999
Q ss_pred cCCCCEEEEeCCCCceeeEEEEc--CCCcE-E--EeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcC
Q psy4832 436 SPTGDLYIADIDARKVNALRVID--STGRM-F--DFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSP 510 (770)
Q Consensus 436 d~~G~lyVaD~~~~ri~~i~~i~--~~G~i-~--~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~ 510 (770)
+++|.+++++..+++| ++++ .+|.+ . .+. .. ....|.+|++++
T Consensus 180 s~dg~~lv~~~~~~~i---~~~~~~~~g~~~~~~~~~-~~----------------------------~~~~p~~i~~d~ 227 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNAT---HRYCLNARGETEYQGVHF-TV----------------------------EPGKTDGLRVDA 227 (296)
T ss_dssp CTTSCEEEEETTTTEE---EEEEECSSSCEEEEEEEE-CC----------------------------SSSCCCSEEEBT
T ss_pred CCCCCEEEEeCCCCeE---EEEEECCCCcCcCCCeEe-eC----------------------------CCCCCCeEEECC
Confidence 9999977999988764 4444 35665 1 222 11 124588999999
Q ss_pred CCcEEEEcCCCceEEeeecC
Q psy4832 511 DGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 511 dG~lyvaD~~~~~I~~i~~~ 530 (770)
+|.|||++ +++|.++.+.
T Consensus 228 ~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 228 GGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp TSCEEEEE--TTEEEEECTT
T ss_pred CCCEEEEc--CCeEEEECCC
Confidence 99999999 5677776553
No 54
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=2.9e-13 Score=144.64 Aligned_cols=233 Identities=13% Similarity=0.159 Sum_probs=157.4
Q ss_pred ccCceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCC----cEEEEEec
Q psy4832 179 LLTPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEK----HQILRVLS 251 (770)
Q Consensus 179 l~~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~----~~I~~i~~ 251 (770)
+..|.+++++++|.||+++. +.|.+++++ |++..+.. .....|.+|+++| +|.||+++... +.|++++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d- 118 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV---SHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT- 118 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE---CSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC-
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee---CCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe-
Confidence 45689999999999999876 589999976 55555442 1235699999997 88999999876 7899984
Q ss_pred cCCccCCCC-cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-------C-eEEECCCC-c
Q psy4832 252 LESVADPSI-NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-------N-IRVVSPEG-I 321 (770)
Q Consensus 252 ~~~~~~~~g-~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-------~-Ir~id~~G-~ 321 (770)
+++ ....+..... ....|.+|+++++|++|+++.. . |+++++++ .
T Consensus 119 ------~~~~~~~~~~~~~~-------------------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 119 ------ENGDNLQDIIEDLS-------------------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp ------TTSCSCEEEECSSS-------------------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred ------CCCCEEEEEEccCc-------------------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 333 2322221000 1236889999999999999863 2 88888764 5
Q ss_pred EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcC--CCc-EEEEecCCCCCCC
Q psy4832 322 IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTN--DLK-VKIVAGIPLHCRT 395 (770)
Q Consensus 322 i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~--~G~-v~~vaG~~~~~~~ 395 (770)
+..+.. .+..|.+++++| +|+ |||++ ++.|++++. +|. +..+......
T Consensus 174 ~~~~~~----------------------~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~--- 227 (333)
T 2dg1_A 174 VTPIIQ----------------------NISVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY--- 227 (333)
T ss_dssp EEEEEE----------------------EESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE---
T ss_pred EEEeec----------------------CCCcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE---
Confidence 554431 244689999999 775 99998 478998885 443 3222100000
Q ss_pred CCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCC
Q psy4832 396 GDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKK 475 (770)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~ 475 (770)
.......|.+|++|++|+|||++..+++ |.+++++|+.........
T Consensus 228 ---------------------------~~~~~~~~~~i~~d~~G~l~v~~~~~~~---v~~~d~~g~~~~~~~~~~---- 273 (333)
T 2dg1_A 228 ---------------------------YFTGHEGPDSCCIDSDDNLYVAMYGQGR---VLVFNKRGYPIGQILIPG---- 273 (333)
T ss_dssp ---------------------------ECCSSSEEEEEEEBTTCCEEEEEETTTE---EEEECTTSCEEEEEECTT----
T ss_pred ---------------------------ecCCCCCCCceEECCCCCEEEEEcCCCE---EEEECCCCCEEEEEEcCC----
Confidence 0000135899999999999999987664 677888887544332110
Q ss_pred CcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEEcCC
Q psy4832 476 NCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVADQG 520 (770)
Q Consensus 476 ~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyvaD~~ 520 (770)
...+.+..|.++++++|| .|||+...
T Consensus 274 -------------------~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 274 -------------------RDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp -------------------GGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred -------------------CccccccCcceEEECCCCCEEEEEeCc
Confidence 001224468999999986 78988654
No 55
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.61 E-value=8.6e-13 Score=142.90 Aligned_cols=228 Identities=13% Similarity=0.152 Sum_probs=142.4
Q ss_pred ccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEE
Q psy4832 219 TQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLA 298 (770)
Q Consensus 219 ~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIa 298 (770)
.++..|.+|+++| +|.|||++.. ++|+++ +++|. +.+...... ...+..|.||+
T Consensus 26 ~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~-------d~~G~-~~~~~~~v~----------------~~g~~g~~gia 79 (354)
T 3a9g_A 26 SDLEVPWSIAPLG-GGRYLVTERP-GRLVLI-------SPSGK-KLVASFDVA----------------NVGEAGLLGLA 79 (354)
T ss_dssp CSCSCEEEEEEEE-TTEEEEEETT-TEEEEE-------CSSCE-EEEEECCCC----------------CSTTCSEEEEE
T ss_pred CCCCCCeEEEEcC-CCeEEEEeCC-CEEEEE-------eCCCc-eEeecccee----------------ecCCCceeeEE
Confidence 4688999999997 8999999987 899999 45666 555532100 01134689999
Q ss_pred EccC----CcEEEEeCC--------C-eEEECCCCc---E---EEeecCCCCCCCcCCCccCCCcccccccccCcceEEE
Q psy4832 299 IKAD----KTMFIADGT--------N-IRVVSPEGI---I---HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLAL 359 (770)
Q Consensus 299 vd~~----G~lYvaD~~--------~-Ir~id~~G~---i---~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~ 359 (770)
++++ |.|||++.. + |.+++.++. + ..++.. .+ ......|.+|++
T Consensus 80 ~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~---------------~~--~~~~h~~~~l~~ 142 (354)
T 3a9g_A 80 LHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDG---------------IP--GAYIHNGGRIRF 142 (354)
T ss_dssp ECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEE---------------EE--CCSSCCCCCEEE
T ss_pred eCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEc---------------CC--CCCCcCCceEEE
Confidence 9996 899999863 3 777765542 2 222110 00 112446889999
Q ss_pred eCCCCeEEEEeC---------------CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccc
Q psy4832 360 SPLDDSLHFIDD---------------RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASN 424 (770)
Q Consensus 360 d~~~g~lyv~D~---------------~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 424 (770)
+| +|.|||++. ++|+|++++|++ -.+.|... .....
T Consensus 143 ~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~--p~~npf~~--------------------------~~i~a 193 (354)
T 3a9g_A 143 GP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP--PADNPFPN--------------------------SPIWS 193 (354)
T ss_dssp CT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC--CTTSSSTT--------------------------CCEEE
T ss_pred CC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC--CCCCCCCC--------------------------CcEEE
Confidence 99 999999962 489999998853 11111100 00012
Q ss_pred cccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCe
Q psy4832 425 MDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSI 503 (770)
Q Consensus 425 ~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P 503 (770)
..+.+|.||++|+ +|.||++|...++...|..+.+.+. .|- ..|.-. |.+. + .......-...-..|
T Consensus 194 ~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~n----yGw-----p~~~g~-~~~~-~-~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 194 YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGN----YGW-----PLATGK-AGRG-E-FVDPVIDTGSETWAP 261 (354)
T ss_dssp ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCB----CCT-----TTCCSC-CCCT-T-SCCCSEECTTCCCCE
T ss_pred EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCc----CCC-----CcccCC-CCCC-C-CcCCEeecCCCCcCC
Confidence 3467899999999 8999999998876555555543221 111 111100 0000 0 000000000112479
Q ss_pred eEEEE-------cCCCcEEEEcCCCceEEeeecC
Q psy4832 504 SALSV-------SPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 504 ~giav-------~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
.|+++ +.+|.+||++...++|+++...
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
Confidence 99999 4689999999999999988654
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=1.5e-13 Score=147.45 Aligned_cols=236 Identities=13% Similarity=0.179 Sum_probs=158.8
Q ss_pred cCCCeEEECCCccEEecccCCCeEEEEecc-CccCCccCCCCCcccccccccCceEEEEcCCCCEEEEe--CceEEEEcC
Q psy4832 130 FHEGILQKGDGSSLHLKHEFPRTVSVVMGT-GLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGD--FNLVRRLTP 206 (770)
Q Consensus 130 ~~~gil~~~dG~~~~~~~~~~~~i~~v~g~-G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d--~~~I~~i~~ 206 (770)
.+.++... +..+|+.....+.|.++... ++... .-..+..|.+|+++++|.|||++ .+.|.++++
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~----------~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~ 112 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVG----------RITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINP 112 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEE----------EEECCSSEEEEEEEETTEEEEEEBSCSEEEEEET
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEE----------EcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 45566653 44688877566788887643 33210 01234689999999999999999 369999997
Q ss_pred C-CcEEEEeccCc--ccccceeEEEEeCCCCcEEEEeCC-CcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCC
Q psy4832 207 E-GNVFTVLQLSA--TQVSYQYYLALSPADGHLYISDAE-KHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGD 282 (770)
Q Consensus 207 ~-G~v~~~~~~~~--~~~~~p~~lav~p~~g~lyvsd~~-~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~ 282 (770)
. +++...+..+. .+...|.+|+++ ++.|||++.+ .+.|.+++. .++.+......
T Consensus 113 ~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~------~t~~~~~~i~~-------------- 170 (328)
T 3dsm_A 113 KTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDT------ETDKVVDELTI-------------- 170 (328)
T ss_dssp TTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEET------TTTEEEEEEEC--------------
T ss_pred CCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEEC------CCCeEEEEEEc--------------
Confidence 5 56665544322 334589999995 8999999984 889999953 22333222211
Q ss_pred CcccccccccCcceEEEccCCcEEEEeCC-----------C-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccc
Q psy4832 283 NGPALAAKLSHPKGLAIKADKTMFIADGT-----------N-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTA 349 (770)
Q Consensus 283 ~g~~~~a~l~~P~gIavd~~G~lYvaD~~-----------~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~ 349 (770)
-..|.+|+++++|.+|+++.. + |.++|+. +++...+....
T Consensus 171 --------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~------------------- 223 (328)
T 3dsm_A 171 --------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL------------------- 223 (328)
T ss_dssp --------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-------------------
T ss_pred --------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-------------------
Confidence 125889999999999999764 3 8899875 66654332210
Q ss_pred cccCcceEEEeCCCCeEEEEeCCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccC
Q psy4832 350 QLQWPTGLALSPLDDSLHFIDDRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLG 428 (770)
Q Consensus 350 ~l~~P~gla~d~~~g~lyv~D~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 428 (770)
-.+|.+|+++|.++.||+++. .|++++.+ +++. ..+.. .....
T Consensus 224 -g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~---~~~~~-------------------------------~~~~~ 267 (328)
T 3dsm_A 224 -GDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVP---VRPFL-------------------------------EFRDT 267 (328)
T ss_dssp -TCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCC---SSCSB-------------------------------CCCSS
T ss_pred -CCCceeEEEecCCCEEEEEcc-EEEEEECCCCcee---eeeee-------------------------------cCCCC
Confidence 126999999994556899887 88888854 4321 00000 00135
Q ss_pred CeeEEEEcC-CCCEEEEe----CCCCceeeEEEEcCCCcEEE
Q psy4832 429 SLTALAFSP-TGDLYIAD----IDARKVNALRVIDSTGRMFD 465 (770)
Q Consensus 429 ~P~giavd~-~G~lyVaD----~~~~ri~~i~~i~~~G~i~~ 465 (770)
.|.+|+++| +|.|||++ ..++ +|..++++|++..
T Consensus 268 ~p~gi~vdp~~g~lyva~~~~y~~~~---~V~v~d~~g~~~~ 306 (328)
T 3dsm_A 268 KYYGLTVNPNNGEVYVADAIDYQQQG---IVYRYSPQGKLID 306 (328)
T ss_dssp CEEEEEECTTTCCEEEEECTTSSSEE---EEEEECTTCCEEE
T ss_pred ceEEEEEcCCCCeEEEEcccccccCC---EEEEECCCCCEEE
Confidence 699999998 78999999 5554 5788898888544
No 57
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.59 E-value=2.9e-13 Score=143.43 Aligned_cols=194 Identities=19% Similarity=0.266 Sum_probs=136.0
Q ss_pred ccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEE
Q psy4832 219 TQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLA 298 (770)
Q Consensus 219 ~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIa 298 (770)
.++..+.+++++|.++.||++|..+++|+++ +++|....+... -..|.+++
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~-------~~~g~~~~~~~~----------------------~~~~~gl~ 92 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGW-------REDGTVDVLLDA----------------------TAFTNGNA 92 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEE-------ETTSCEEEEEES----------------------CSCEEEEE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEE-------eCCCCEEEEeCC----------------------CCccceee
Confidence 3567889999998444599999999999999 456666554421 12588999
Q ss_pred EccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC-----
Q psy4832 299 IKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD----- 371 (770)
Q Consensus 299 vd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~----- 371 (770)
+|++|+||+++... |.+++++|.+..++.... ...++.|.+|++++ +|+|||+|.
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~-dG~l~~td~~~g~~ 154 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYA-----------------GKRLNSPNDLIVAR-DGAIWFTDPPFGLR 154 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTSCEEEEECEET-----------------TEECSCCCCEEECT-TSCEEEECCSGGGS
T ss_pred ECCCCCEEEEECCCCEEEEECCCCCEEEEEeccC-----------------CCccCCCCCEEECC-CCCEEEeCcCCCcc
Confidence 99999999998763 999999998877753211 12467899999999 999999862
Q ss_pred --------------CEEEEEcC-CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEc
Q psy4832 372 --------------RVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFS 436 (770)
Q Consensus 372 --------------~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd 436 (770)
+.|+++++ +|+++.+. .+..|++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--------------------------------------~~~~p~gl~~s 196 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMA--------------------------------------DLDHPNGLAFS 196 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--------------------------------------EESSEEEEEEC
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEe--------------------------------------cCCCCcceEEc
Confidence 46888886 46655443 13458999999
Q ss_pred CCCC-EEEEeCCC-----CceeeEEEEcCCC-cEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEc
Q psy4832 437 PTGD-LYIADIDA-----RKVNALRVIDSTG-RMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVS 509 (770)
Q Consensus 437 ~~G~-lyVaD~~~-----~ri~~i~~i~~~G-~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~ 509 (770)
++|. |||+|... ++ |++++.++ .+.... . +. + .....|.+|+++
T Consensus 197 pdg~~lyv~~~~~~~~~~~~---i~~~~~~~~~l~~~~--~--------------~~----~------~~~~~pdgi~~d 247 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVE---ITAFAWRDGALHDRR--H--------------FA----S------VPDGLPDGFCVD 247 (305)
T ss_dssp TTSSEEEEEECCC---CCCE---EEEEEEETTEEEEEE--E--------------EE----C------CSSSCCCSEEEC
T ss_pred CCCCEEEEEecCCcCCCCCE---EEEEEecCCCccCCe--E--------------EE----E------CCCCCCCeEEEC
Confidence 9997 99999873 44 55554322 121100 0 00 0 012358899999
Q ss_pred CCCcEEEEcCCCceEEeee
Q psy4832 510 PDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 510 ~dG~lyvaD~~~~~I~~i~ 528 (770)
++|+||+++. ..|.++.
T Consensus 248 ~~G~lwv~~~--~gv~~~~ 264 (305)
T 3dr2_A 248 RGGWLWSSSG--TGVCVFD 264 (305)
T ss_dssp TTSCEEECCS--SEEEEEC
T ss_pred CCCCEEEecC--CcEEEEC
Confidence 9999999972 2355443
No 58
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.59 E-value=9.3e-14 Score=150.55 Aligned_cols=259 Identities=18% Similarity=0.198 Sum_probs=154.8
Q ss_pred eecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCC----CCEEEEeC-----
Q psy4832 128 YNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPD----GSLYVGDF----- 198 (770)
Q Consensus 128 ~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~d----G~lyv~d~----- 198 (770)
|+.|.++....||. +|+++ ..+.|..+. +|....+.-. +.....+..|.+|+++|+ |.|||++.
T Consensus 30 l~~P~~ia~~pdG~-l~V~e-~~g~I~~i~-~g~~~~~~~~----~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAE-RPGRIRLFR-EGRLSTYAEL----SVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEE-TTTEEEEEE-TTEEEEEEEC----CCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCCceEEEEcCCCe-EEEEe-CCCeEEEEE-CCCccEeecc----eEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 66889999999995 89998 668888887 5553322100 011234678999999997 89999987
Q ss_pred --ceEEEEcCCCc----EEEEec-cC--cccccceeEEEEeCCCCcEEEEeCC-------------CcEEEEEeccCCcc
Q psy4832 199 --NLVRRLTPEGN----VFTVLQ-LS--ATQVSYQYYLALSPADGHLYISDAE-------------KHQILRVLSLESVA 256 (770)
Q Consensus 199 --~~I~~i~~~G~----v~~~~~-~~--~~~~~~p~~lav~p~~g~lyvsd~~-------------~~~I~~i~~~~~~~ 256 (770)
++|.|++.++. ...++. .+ ......|.+|+++| +|.|||++.. .++|+|+
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri------- 174 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRL------- 174 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEE-------
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEE-------
Confidence 78999987642 223332 22 23456789999998 8899999742 2588888
Q ss_pred CCCCcEEEEECCCccccCCCCCCcCC---CcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCC
Q psy4832 257 DPSINWEVAVGSGERCIPGDETNCGD---NGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHK 330 (770)
Q Consensus 257 ~~~g~~~~vaG~g~~~~p~~~~~~g~---~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~ 330 (770)
+++|.+ |..+.+.+. ........+.+|.||++|+ +|+||++|.+. ++. .+...|..+.....
T Consensus 175 ~~dG~~-----------p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~-~~~dei~~i~~G~n 242 (352)
T 2ism_A 175 TPEGEP-----------APGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQG-YGHDEVNLIVPGGN 242 (352)
T ss_dssp CTTSSB-----------CTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC-------CCCEEEEECTTCB
T ss_pred cCCCCC-----------CCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCC-CCCeEEEEeccCCc
Confidence 445431 111111111 1111223467899999999 89999999765 322 11123333321111
Q ss_pred CCCCcCCCc--c-CCCc--cccc-ccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCc--EEEEecCCCCCCCCCCCC
Q psy4832 331 HHNIWSPFN--C-HRSF--PAST-AQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLK--VKIVAGIPLHCRTGDKDK 400 (770)
Q Consensus 331 ~~~~~~p~~--~-~~~~--~~~~-~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~--v~~vaG~~~~~~~~~~~~ 400 (770)
.+ |.... + ..+. +... .....|.||++. +|+|||++ .++|++++.++. ...+ +...
T Consensus 243 yG--wp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~-~~~~--------- 308 (352)
T 2ism_A 243 YG--WPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRV-LRVE--------- 308 (352)
T ss_dssp CC--TTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEE-EEEE---------
T ss_pred CC--CCcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceee-cchh---------
Confidence 11 11000 0 0000 1000 112468999995 89999999 579999875422 1000 0000
Q ss_pred ccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCC
Q psy4832 401 RDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDA 448 (770)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~ 448 (770)
.+ . ..+..|.+|+++|+|.|||++...
T Consensus 309 -------------------~~-~-~~~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 309 -------------------TA-L-SGFGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp -------------------EE-E-ESSCCEEEEEECTTSCEEEEECST
T ss_pred -------------------ee-c-ccCCCeeEEEECCCCcEEEEEeCC
Confidence 00 0 124579999999999999999753
No 59
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=1.9e-13 Score=144.22 Aligned_cols=201 Identities=13% Similarity=0.077 Sum_probs=144.4
Q ss_pred cccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceE
Q psy4832 218 ATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGL 297 (770)
Q Consensus 218 ~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gI 297 (770)
......+.+.+++|.++.||++|..+++|++++.. .+....+. . -..|.+|
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~------~~~~~~~~-~----------------------~~~~~~i 59 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSF------TKQVQRVT-M----------------------DAPVSSV 59 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETT------TCCEEEEE-C----------------------SSCEEEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECC------CCcEEEEe-C----------------------CCceEEE
Confidence 45667899999998889999999999999999531 23332221 1 1257899
Q ss_pred EEccCCcEEEEeCCCeEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC-----
Q psy4832 298 AIKADKTMFIADGTNIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD----- 371 (770)
Q Consensus 298 avd~~G~lYvaD~~~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~----- 371 (770)
+++++|+||++....|.+++++ |.+..+..... ...+..|.++++++ +|+|||++.
T Consensus 60 ~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~-----------------~~~~~~~~di~~d~-dG~l~~~~~~~~~~ 121 (297)
T 3g4e_A 60 ALRQSGGYVATIGTKFCALNWKEQSAVVLATVDN-----------------DKKNNRFNDGKVDP-AGRYFAGTMAEETA 121 (297)
T ss_dssp EEBTTSSEEEEETTEEEEEETTTTEEEEEEECCT-----------------TCSSEEEEEEEECT-TSCEEEEEEECCSB
T ss_pred EECCCCCEEEEECCeEEEEECCCCcEEEEEecCC-----------------CCCCCCCCCEEECC-CCCEEEecCCcccc
Confidence 9999999999985559999975 67766653211 01245689999999 999999871
Q ss_pred --------CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EE
Q psy4832 372 --------RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LY 442 (770)
Q Consensus 372 --------~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-ly 442 (770)
+.|++++++|++..+.. .+..|++|+++++|+ ||
T Consensus 122 ~~~~~~~~~~l~~~d~~g~~~~~~~-------------------------------------~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 122 PAVLERHQGALYSLFPDHHVKKYFD-------------------------------------QVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp TTBCCTTCEEEEEECTTSCEEEEEE-------------------------------------EESBEEEEEECTTSCEEE
T ss_pred cccccCCCcEEEEEECCCCEEEEee-------------------------------------ccccccceEEcCCCCEEE
Confidence 37999998887665442 135699999999997 99
Q ss_pred EEeCCCCceeeEEEEc-CCCcEEE---eecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEc
Q psy4832 443 IADIDARKVNALRVID-STGRMFD---FAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVAD 518 (770)
Q Consensus 443 VaD~~~~ri~~i~~i~-~~G~i~~---~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD 518 (770)
|+|+.+++|.++. ++ .+|.+.. ++... .....|.+|+++++|.|||++
T Consensus 165 v~~~~~~~i~~~~-~d~~~G~~~~~~~~~~~~---------------------------~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 165 YIDSLSYSVDAFD-YDLQTGQISNRRSVYKLE---------------------------KEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEGGGTEEEEEE-ECTTTCCEEEEEEEEECC---------------------------GGGCEEEEEEEBTTSCEEEEE
T ss_pred EecCCCCcEEEEe-ccCCCCcccCcEEEEECC---------------------------CCCCCCCeeEECCCCCEEEEE
Confidence 9999887653332 23 4666531 11000 012359999999999999999
Q ss_pred CCCceEEeeecC
Q psy4832 519 QGSLHILALQHY 530 (770)
Q Consensus 519 ~~~~~I~~i~~~ 530 (770)
..+++|.++.+.
T Consensus 217 ~~~~~v~~~d~~ 228 (297)
T 3g4e_A 217 YNGGRVIRLDPV 228 (297)
T ss_dssp ETTTEEEEECTT
T ss_pred cCCCEEEEEcCC
Confidence 888888888664
No 60
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=2e-13 Score=144.18 Aligned_cols=240 Identities=13% Similarity=0.157 Sum_probs=163.5
Q ss_pred eeeecCCCeEEECCCccEEec-------ccCCCeEEEEe-ccCccCCccCCCCCcccccccccCceEEEEcCC-CCEEEE
Q psy4832 126 HHYNFHEGILQKGDGSSLHLK-------HEFPRTVSVVM-GTGLQRPLVCKDCDGVARDARLLTPVALTSGPD-GSLYVG 196 (770)
Q Consensus 126 ~~~~~~~gil~~~dG~~~~~~-------~~~~~~i~~v~-g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~d-G~lyv~ 196 (770)
..+..|+++++..+| .+|+. +...+.|..+. .+|....+.- +........|.+++++++ |.|||+
T Consensus 15 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-----~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-----PEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp CCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-----CEETTEECCEEEEEECSSSSEEEEE
T ss_pred ccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-----cccCCCCCCCceEEEecCCCcEEEE
Confidence 345678888888888 46766 43566777775 3444332210 001112357999999999 999999
Q ss_pred eC-ceEEEEcCCCcEEEE-eccC-cccccceeEEEEeCCCCcEEEEeCCC---------------cEEEEEeccCCccCC
Q psy4832 197 DF-NLVRRLTPEGNVFTV-LQLS-ATQVSYQYYLALSPADGHLYISDAEK---------------HQILRVLSLESVADP 258 (770)
Q Consensus 197 d~-~~I~~i~~~G~v~~~-~~~~-~~~~~~p~~lav~p~~g~lyvsd~~~---------------~~I~~i~~~~~~~~~ 258 (770)
+. +.|.+++++|++..+ .... ......|.+|++++ +|+|||++... +.|+++ ++
T Consensus 89 ~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~ 160 (314)
T 1pjx_A 89 DMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCF-------TT 160 (314)
T ss_dssp ETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE-------CT
T ss_pred ECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEE-------CC
Confidence 97 589999988887766 4321 12346789999997 89999999865 688888 45
Q ss_pred CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEc----cCC-cEEEEeCCC--eEEECC--CCcEEE---ee
Q psy4832 259 SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIK----ADK-TMFIADGTN--IRVVSP--EGIIHT---LI 326 (770)
Q Consensus 259 ~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd----~~G-~lYvaD~~~--Ir~id~--~G~i~t---~~ 326 (770)
++.+..+.. .+..|.+|+++ ++| .||+++..+ |++++. +|.+.. +.
T Consensus 161 ~g~~~~~~~----------------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 161 DGQMIQVDT----------------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp TSCEEEEEE----------------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEecc----------------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 566554431 13468899999 998 599998654 888874 454322 11
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccc
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDF 403 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~ 403 (770)
... ...+..|.+|++++ +|+|||++ ++.|.+++++ |++......+
T Consensus 219 ~~~------------------~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~------------- 266 (314)
T 1pjx_A 219 HIP------------------GTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCP------------- 266 (314)
T ss_dssp ECC------------------CCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECS-------------
T ss_pred ECC------------------CCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-------------
Confidence 110 00114689999999 99999997 5899999987 6543222111
Q ss_pred cccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC
Q psy4832 404 KDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS 459 (770)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~ 459 (770)
...|.+++++++|+ |||++..++. |.+++.
T Consensus 267 -----------------------~~~~~~i~~~~dg~~l~v~~~~~~~---l~~~~~ 297 (314)
T 1pjx_A 267 -----------------------FEKPSNLHFKPQTKTIFVTEHENNA---VWKFEW 297 (314)
T ss_dssp -----------------------SSCEEEEEECTTSSEEEEEETTTTE---EEEEEC
T ss_pred -----------------------CCCceeEEECCCCCEEEEEeCCCCe---EEEEeC
Confidence 13589999999998 9999988765 445544
No 61
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=8.2e-13 Score=141.58 Aligned_cols=230 Identities=15% Similarity=0.158 Sum_probs=155.9
Q ss_pred cCceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 180 LTPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
..|.+|+++ ++.+||+.. +.|.++|+. +++...+. ....|.+|++++ ++.|||++...+.|.+++.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~----- 112 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINP----- 112 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEET-----
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeC-CCeEEEEECCCCeEEEEEC-----
Confidence 358999986 688999987 589999975 77765552 356799999986 6799999977789999953
Q ss_pred CCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC--C-eEEECCC-CcEEEeecCCCCC
Q psy4832 257 DPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT--N-IRVVSPE-GIIHTLIGHHKHH 332 (770)
Q Consensus 257 ~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~--~-Ir~id~~-G~i~t~~g~~~~~ 332 (770)
.++.+......+.. ..++..|.+|++ .++.|||++.+ + |.++|+. +++...+..+
T Consensus 113 -~t~~~~~~i~~g~~----------------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--- 171 (328)
T 3dsm_A 113 -KTYEITGYIECPDM----------------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG--- 171 (328)
T ss_dssp -TTTEEEEEEECTTC----------------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS---
T ss_pred -CCCeEEEEEEcCCc----------------cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC---
Confidence 23443322211110 123457999999 47899999863 3 9999965 5554433221
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC------------CEEEEEcCC-CcEEEEecCCCCCCCCCCC
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD------------RVIFKLTND-LKVKIVAGIPLHCRTGDKD 399 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~------------~~I~~i~~~-G~v~~vaG~~~~~~~~~~~ 399 (770)
..|.+|++++ +|++||++. +.|++|++. +++......+.
T Consensus 172 -------------------~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-------- 223 (328)
T 3dsm_A 172 -------------------IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-------- 223 (328)
T ss_dssp -------------------SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--------
T ss_pred -------------------CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--------
Confidence 2588999999 999999983 579999965 66543322110
Q ss_pred CccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCc
Q psy4832 400 KRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNC 477 (770)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~ 477 (770)
-..|.+|+++|+|. ||+++. .|.++|. ++++.. ..
T Consensus 224 ---------------------------g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~~~~~---~~------- 260 (328)
T 3dsm_A 224 ---------------------------GDWPSEVQLNGTRDTLYWINN------DIWRMPVEADRVPV---RP------- 260 (328)
T ss_dssp ---------------------------TCCCEEEEECTTSCEEEEESS------SEEEEETTCSSCCS---SC-------
T ss_pred ---------------------------CCCceeEEEecCCCEEEEEcc------EEEEEECCCCceee---ee-------
Confidence 02489999999765 999886 3667776 344310 00
Q ss_pred CCCCCcccccCccCcccccceecCCeeEEEEcC-CCcEEEEc----CCCceEEeeec
Q psy4832 478 NTTNCAEFEKNSKETLLTSTARFTSISALSVSP-DGVVNVAD----QGSLHILALQH 529 (770)
Q Consensus 478 ~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~-dG~lyvaD----~~~~~I~~i~~ 529 (770)
... .....|.+|+++| +|.|||++ ..+++|.+++.
T Consensus 261 ---------------~~~--~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 261 ---------------FLE--FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ---------------SBC--CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred ---------------eec--CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 000 0145799999999 88999999 56666555543
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.56 E-value=1.1e-12 Score=141.11 Aligned_cols=258 Identities=14% Similarity=0.109 Sum_probs=156.9
Q ss_pred ccCceEEEEcCCCCEEEEeC----ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccC
Q psy4832 179 LLTPVALTSGPDGSLYVGDF----NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLE 253 (770)
Q Consensus 179 l~~P~~la~~~dG~lyv~d~----~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~ 253 (770)
...|.+|+++|||.||+++. +.|+.++.+ |+...+.. .......|.+|+++|.+..||+++..++.|..++.
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~-~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~-- 115 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT-VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI-- 115 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEE-EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE--
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeee-eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe--
Confidence 46789999999999999875 477777754 44332221 12234578999999855569999987787777753
Q ss_pred CccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEEC--CCCcEEEeecCC
Q psy4832 254 SVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVS--PEGIIHTLIGHH 329 (770)
Q Consensus 254 ~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id--~~G~i~t~~g~~ 329 (770)
+.+|....+...... +. ++........|.+++++++|.||+++... |+.++ .+|.+..+....
T Consensus 116 ---~~~g~~~~~~~~~~~---------~~-~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~ 182 (347)
T 3hfq_A 116 ---AADGALTLTDTVQHS---------GH-GPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT 182 (347)
T ss_dssp ---CTTSCEEEEEEEECC---------CC-CSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred ---CCCCCeeecceeecC---------CC-CCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE
Confidence 344554443321000 00 01011223468899999999999998754 66554 456655432110
Q ss_pred CCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEc--C-CCcEEEEecCCCCCCCCCCCCccc
Q psy4832 330 KHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLT--N-DLKVKIVAGIPLHCRTGDKDKRDF 403 (770)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~--~-~G~v~~vaG~~~~~~~~~~~~~~~ 403 (770)
.. .-..|.+++++| +|+ ||+++ .+.|..++ . +|++..+........
T Consensus 183 ~~------------------~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~--------- 234 (347)
T 3hfq_A 183 ME------------------AGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA--------- 234 (347)
T ss_dssp CC------------------TTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT---------
T ss_pred cC------------------CCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC---------
Confidence 00 012578999999 886 89987 46655555 3 365443321111000
Q ss_pred cccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCC
Q psy4832 404 KDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNC 482 (770)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~ 482 (770)
.......|.+++++|+|. ||+++..+++| .+..++.+|.+..+.....
T Consensus 235 -------------------~~~~~~~~~~i~~spdG~~l~v~~~~~~~v-~v~~~~~~g~~~~~~~~~~----------- 283 (347)
T 3hfq_A 235 -------------------DYTAHNGAAAIRLSHDGHFLYVSNRGYNTL-AVFAVTADGHLTLIQQIST----------- 283 (347)
T ss_dssp -------------------TCCSCCEEEEEEECTTSCEEEEEEETTTEE-EEEEECGGGCEEEEEEEEC-----------
T ss_pred -------------------CCCCCCcceeEEECCCCCEEEEEeCCCCEE-EEEEECCCCcEEEeEEEec-----------
Confidence 001124589999999998 88999877664 2334445565544331110
Q ss_pred cccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEee
Q psy4832 483 AEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILAL 527 (770)
Q Consensus 483 ~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i 527 (770)
.-..|.+++++|||. ||+++..++.|..+
T Consensus 284 ----------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 284 ----------------EGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp ----------------SSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ----------------CCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 013488999999996 89998877776554
No 63
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=2.5e-11 Score=126.75 Aligned_cols=206 Identities=13% Similarity=0.108 Sum_probs=152.5
Q ss_pred CceEEEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC-CcEEEEEeccCCccCCC
Q psy4832 181 TPVALTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE-KHQILRVLSLESVADPS 259 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~-~~~I~~i~~~~~~~~~~ 259 (770)
.|.++++.|+|+|+++..+.|+.++++|++...+..+ .-.....+++.+ +|+++|++.. +++|+.+ +++
T Consensus 38 ~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~--~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~v-------d~~ 107 (276)
T 3no2_A 38 ECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAP--AGCEMQTARILP-DGNALVAWCGHPSTILEV-------NMK 107 (276)
T ss_dssp CCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECC--TTCEEEEEEECT-TSCEEEEEESTTEEEEEE-------CTT
T ss_pred CCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCC--CCccccccEECC-CCCEEEEecCCCCEEEEE-------eCC
Confidence 5788999999999997778999999999988777532 112456778886 8999999988 8899988 677
Q ss_pred CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCC
Q psy4832 260 INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSP 337 (770)
Q Consensus 260 g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p 337 (770)
|+...-.+.... ....+..|.+++++++|++++++..+ |..+|++|++.--++.+
T Consensus 108 Gk~l~~~~~~~~---------------~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~-------- 164 (276)
T 3no2_A 108 GEVLSKTEFETG---------------IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS-------- 164 (276)
T ss_dssp SCEEEEEEECCS---------------CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECS--------
T ss_pred CCEEEEEeccCC---------------CCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECC--------
Confidence 875433321110 01234568899999999999998765 99999999876655432
Q ss_pred CccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcccccccccccccc
Q psy4832 338 FNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKST 414 (770)
Q Consensus 338 ~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (770)
.+|.++++.+ +|+++|++ +++|+.++++ |++..-.+....
T Consensus 165 --------------~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~---------------------- 207 (276)
T 3no2_A 165 --------------GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDI---------------------- 207 (276)
T ss_dssp --------------SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS----------------------
T ss_pred --------------CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC----------------------
Confidence 2577888888 89999987 5799999988 987655542110
Q ss_pred ccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCc-------eeeEEEEcCCCcEE
Q psy4832 415 VQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARK-------VNALRVIDSTGRMF 464 (770)
Q Consensus 415 ~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~r-------i~~i~~i~~~G~i~ 464 (770)
....|..|.++++.++|++||+++.++. -.++..++++|++.
T Consensus 208 --------~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 256 (276)
T 3no2_A 208 --------EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 256 (276)
T ss_dssp --------BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEE
T ss_pred --------CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEE
Confidence 0113677999999999999999975431 12477889999874
No 64
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.50 E-value=3.1e-12 Score=142.99 Aligned_cols=165 Identities=23% Similarity=0.269 Sum_probs=106.6
Q ss_pred ccccCceEEEEcCCCCEEEEeCc--eEEEEcC-CCcEEEEeccCc-----ccccceeEEEEeCC---CCcEEEEeCC---
Q psy4832 177 ARLLTPVALTSGPDGSLYVGDFN--LVRRLTP-EGNVFTVLQLSA-----TQVSYQYYLALSPA---DGHLYISDAE--- 242 (770)
Q Consensus 177 ~~l~~P~~la~~~dG~lyv~d~~--~I~~i~~-~G~v~~~~~~~~-----~~~~~p~~lav~p~---~g~lyvsd~~--- 242 (770)
..|..|++|+++|+|+|||++.. +|++++. +|+...+..... .....+.+||++|. ++.|||+++.
T Consensus 24 ~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 35789999999999999999984 7999986 477766554321 13456779999986 8999999864
Q ss_pred ---------CcEEEEEeccCCccCCCCcEEEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-
Q psy4832 243 ---------KHQILRVLSLESVADPSINWEVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT- 311 (770)
Q Consensus 243 ---------~~~I~~i~~~~~~~~~~g~~~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~- 311 (770)
..+|.|+.....-... ...+++. +... ...+.+.+|+++++|.|||+-+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~-~~~~~i~~~~p~------------------~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTL-EKPVDLLAGLPS------------------SKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEE-EEEEEEEEEECC------------------CSSCCEEEEEECTTSCEEEEECCT
T ss_pred CCCccccccccEEEEEEECCCCCCc-CCcEEEEEcCCC------------------CCCCCCCeEeECCCCeEEEEECCC
Confidence 4689888642110000 1122332 1100 11356899999999999998431
Q ss_pred ---------------------------------CeEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEE
Q psy4832 312 ---------------------------------NIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLA 358 (770)
Q Consensus 312 ---------------------------------~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla 358 (770)
.|.+++++|.|. .. .|+..+.....-...+.+|.+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip----~~------Npf~~~~~~ei~a~G~RNp~gla 234 (454)
T 1cru_A 165 GRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP----KD------NPSFNGVVSHIYTLGHRNPQGLA 234 (454)
T ss_dssp TTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC----TT------CCEETTEECSEEEBCCSEEEEEE
T ss_pred CCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC----CC------CCCCCCCcceEEEECCCCcceEE
Confidence 166666666421 00 01100001122234578999999
Q ss_pred EeCCCCeEEEEeC
Q psy4832 359 LSPLDDSLHFIDD 371 (770)
Q Consensus 359 ~d~~~g~lyv~D~ 371 (770)
+++ +|.||++|+
T Consensus 235 ~dp-~G~L~~~d~ 246 (454)
T 1cru_A 235 FTP-NGKLLQSEQ 246 (454)
T ss_dssp ECT-TSCEEEEEE
T ss_pred ECC-CCCEEEEec
Confidence 999 899999994
No 65
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.48 E-value=7.8e-11 Score=126.05 Aligned_cols=264 Identities=16% Similarity=0.175 Sum_probs=170.0
Q ss_pred CCCeEEECCCccEEecccC------CCeEEEEecc-CccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC--ce
Q psy4832 131 HEGILQKGDGSSLHLKHEF------PRTVSVVMGT-GLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF--NL 200 (770)
Q Consensus 131 ~~gil~~~dG~~~~~~~~~------~~~i~~v~g~-G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~--~~ 200 (770)
+.++.+..||..+|+.... .+.|..+... +.... .-..-..|.+++++++|. +|+++. +.
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~----------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ----------AIHNDLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE----------EEEESSCCCSEEEETTTTEEEEEETTTTE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE----------EEecCCCcceEEECCCCCEEEEEecCCCE
Confidence 4456777888888877633 3456666532 22110 000113588999999998 999987 58
Q ss_pred EEEEcC-CCcEEEEeccCcc------cccceeEEEEeCCCCcEEEEeC-CCcEEEEEeccCCccCCCCcEEEEECCCccc
Q psy4832 201 VRRLTP-EGNVFTVLQLSAT------QVSYQYYLALSPADGHLYISDA-EKHQILRVLSLESVADPSINWEVAVGSGERC 272 (770)
Q Consensus 201 I~~i~~-~G~v~~~~~~~~~------~~~~p~~lav~p~~g~lyvsd~-~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~ 272 (770)
|..++. +|++...+..... ...+|.+++++|.++.||+++. .+++|+.++. .++........
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~------~~~~~~~~~~~---- 182 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG------GNIKLKTAIQN---- 182 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET------TTTEEEEEECC----
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC------CCCceEEEecC----
Confidence 999986 4777665543211 1235899999996677999984 4678998853 23333222210
Q ss_pred cCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEECC-CCcEEEeecCCCCCCCcCCCccCCCcccccc
Q psy4832 273 IPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTA 349 (770)
Q Consensus 273 ~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~ 349 (770)
.-..|.+++++++|. ||+++..+ |..+|. ++++......+...
T Consensus 183 -----------------~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----------------- 228 (353)
T 3vgz_A 183 -----------------TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDG----------------- 228 (353)
T ss_dssp -----------------CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS-----------------
T ss_pred -----------------CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC-----------------
Confidence 012488999999886 88888765 888885 45554433221110
Q ss_pred cccCcceEEEeCCCC-eEEEEe--CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccccc
Q psy4832 350 QLQWPTGLALSPLDD-SLHFID--DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNM 425 (770)
Q Consensus 350 ~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 425 (770)
....|.+++++| +| .||+++ .+.|+.++. ++++.....
T Consensus 229 ~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~------------------------------------- 270 (353)
T 3vgz_A 229 KEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVA------------------------------------- 270 (353)
T ss_dssp SCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEE-------------------------------------
T ss_pred CCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEE-------------------------------------
Confidence 123578999999 65 589998 478999985 455433221
Q ss_pred ccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCe
Q psy4832 426 DLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSI 503 (770)
Q Consensus 426 ~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P 503 (770)
+..|.+++++++|. ||+++..++. |..++. ++++...... -..|
T Consensus 271 -~~~~~~~~~s~dg~~l~v~~~~~~~---v~~~d~~~~~~~~~~~~------------------------------~~~~ 316 (353)
T 3vgz_A 271 -APESLAVLFNPARNEAYVTHRQAGK---VSVIDAKSYKVVKTFDT------------------------------PTHP 316 (353)
T ss_dssp -CSSCCCEEEETTTTEEEEEETTTTE---EEEEETTTTEEEEEEEC------------------------------CSEE
T ss_pred -cCCCceEEECCCCCEEEEEECCCCe---EEEEECCCCeEEEEEec------------------------------CCCC
Confidence 12356799999998 9999987764 666775 4654332211 1248
Q ss_pred eEEEEcCCCc-EEEEcCC
Q psy4832 504 SALSVSPDGV-VNVADQG 520 (770)
Q Consensus 504 ~giav~~dG~-lyvaD~~ 520 (770)
.+++++|||. ||++...
T Consensus 317 ~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 317 NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEECTTSCEEEEEEEC
T ss_pred CeEEEcCCCCEEEEEEcc
Confidence 9999999996 8888654
No 66
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.44 E-value=5.6e-11 Score=127.09 Aligned_cols=224 Identities=14% Similarity=0.126 Sum_probs=152.4
Q ss_pred cccCceEEEEcCC-CCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 178 RLLTPVALTSGPD-GSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 178 ~l~~P~~la~~~d-G~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
.+..|.+++++++ +.||++|. +.|.++++++.....+.. ...+.++++++ +|.+|++.. ..|++++.
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~----~~~v~~i~~~~-dg~l~v~~~--~gl~~~d~--- 116 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL----PFMGSALAKIS-DSKQLIASD--DGLFLRDT--- 116 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC----SSCEEEEEEEE-TTEEEEEET--TEEEEEET---
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC----CCcceEEEEeC-CCeEEEEEC--CCEEEEEC---
Confidence 3455788999995 78999997 589999987655444432 13688999997 899999873 46888852
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC--------CeEEECCCCcEEEee
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT--------NIRVVSPEGIIHTLI 326 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~--------~Ir~id~~G~i~t~~ 326 (770)
.++.+..+..... ......|.++++|++|++||++.. .|++++ +|.+..+.
T Consensus 117 ---~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~ 175 (326)
T 2ghs_A 117 ---ATGVLTLHAELES-----------------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLF 175 (326)
T ss_dssp ---TTCCEEEEECSST-----------------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEE
T ss_pred ---CCCcEEEEeeCCC-----------------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEee
Confidence 2456655542110 011346889999999999998742 288888 77766543
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEcC---CC-cE---EEEecCCCCCCCC
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLTN---DL-KV---KIVAGIPLHCRTG 396 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~---~G-~v---~~vaG~~~~~~~~ 396 (770)
. .+..|.+|++++ ++ .||+++ .+.|++++. +| .+ ..+...
T Consensus 176 ~----------------------~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~------- 225 (326)
T 2ghs_A 176 A----------------------DISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS------- 225 (326)
T ss_dssp E----------------------EESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-------
T ss_pred C----------------------CCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC-------
Confidence 1 234688999999 76 599998 478998884 34 31 111100
Q ss_pred CCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCC
Q psy4832 397 DKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKN 476 (770)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~ 476 (770)
......|.++++|++|+|||+...+++ |.+++++|++......+
T Consensus 226 ---------------------------~~~~~~p~gi~~d~~G~lwva~~~~~~---v~~~d~~g~~~~~i~~~------ 269 (326)
T 2ghs_A 226 ---------------------------TGIKGGMDGSVCDAEGHIWNARWGEGA---VDRYDTDGNHIARYEVP------ 269 (326)
T ss_dssp ---------------------------TTSSSEEEEEEECTTSCEEEEEETTTE---EEEECTTCCEEEEEECS------
T ss_pred ---------------------------CCCCCCCCeeEECCCCCEEEEEeCCCE---EEEECCCCCEEEEEECC------
Confidence 001235899999999999999987664 67788888754332111
Q ss_pred cCCCCCcccccCccCcccccceecCCeeEEEEc-CCC-cEEEEcCCC
Q psy4832 477 CNTTNCAEFEKNSKETLLTSTARFTSISALSVS-PDG-VVNVADQGS 521 (770)
Q Consensus 477 ~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~-~dG-~lyvaD~~~ 521 (770)
...|.+++++ +++ .|||+....
T Consensus 270 -----------------------~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 270 -----------------------GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -----------------------CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -----------------------CCCcEEEEEecCCCCEEEEEecCC
Confidence 1248899998 775 688886554
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=1.6e-10 Score=123.86 Aligned_cols=236 Identities=17% Similarity=0.153 Sum_probs=138.6
Q ss_pred eEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC--CcEEEEEeccCCccCCCCcEEEEECCCccccCCC
Q psy4832 200 LVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE--KHQILRVLSLESVADPSINWEVAVGSGERCIPGD 276 (770)
Q Consensus 200 ~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~--~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~ 276 (770)
.|..++. +|+...+.. ......|.+|+++| +|.||+++.. ++.|+.++.. .+....+...
T Consensus 19 ~v~~~d~~tg~~~~~~~--~~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~------~g~~~~~~~~-------- 81 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGL--LAATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQID------GQTAHKLNTV-------- 81 (347)
T ss_dssp EEEEEETTTTEEEEEEE--EEECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEE------TTEEEEEEEE--------
T ss_pred EEEEEcCCCCeEEEeee--eeccCCcceEEEcc-CCeEEEEEecCCCceEEEEEec------CCcEEEeeee--------
Confidence 3666665 455543221 12346799999998 7779998863 5778777531 2333322210
Q ss_pred CCCcCCCcccccccccCcceEEEccCCc-EEEEeCC-C-eEEE--CCCCcEEEeecCCCCCCCcCCCccCCCcccccccc
Q psy4832 277 ETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT-N-IRVV--SPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQL 351 (770)
Q Consensus 277 ~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~-~-Ir~i--d~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l 351 (770)
......|.+|+++++|. ||+++.. + |+.+ +.+|.+..+....... ..+......
T Consensus 82 -----------~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~----------~~p~~~~~~ 140 (347)
T 3hfq_A 82 -----------VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSG----------HGPRPEQDG 140 (347)
T ss_dssp -----------EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCC----------CCSSTTCSS
T ss_pred -----------ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCC----------CCCCccccC
Confidence 01133689999999997 8888843 3 5554 4566655433211100 000011124
Q ss_pred cCcceEEEeCCCCeEEEEe--CCEEEEEc--CCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccccccc
Q psy4832 352 QWPTGLALSPLDDSLHFID--DRVIFKLT--NDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDL 427 (770)
Q Consensus 352 ~~P~gla~d~~~g~lyv~D--~~~I~~i~--~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 427 (770)
..|.+++++| +|+||+++ .+.|+.++ .+|++..+...... .-
T Consensus 141 ~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~---------------------------------~g 186 (347)
T 3hfq_A 141 SHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTME---------------------------------AG 186 (347)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECC---------------------------------TT
T ss_pred CCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcC---------------------------------CC
Confidence 4688999999 88899998 46676665 35765543311000 01
Q ss_pred CCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeE
Q psy4832 428 GSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISA 505 (770)
Q Consensus 428 ~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~g 505 (770)
..|.+++++|+|. ||+++...++|. +..++. +|++..+....... ........|.+
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~-v~~~~~~~g~~~~~~~~~~~~---------------------~~~~~~~~~~~ 244 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIA-SLKYDTQTGAFTQLGIVKTIP---------------------ADYTAHNGAAA 244 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEE-EEEEETTTTEEEEEEEEESSC---------------------TTCCSCCEEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEE-EEEecCCCCceEEeeeeeecC---------------------CCCCCCCccee
Confidence 2488999999998 999998887653 333443 56654332111000 00011245899
Q ss_pred EEEcCCCc-EEEEcCCCceEEeeec
Q psy4832 506 LSVSPDGV-VNVADQGSLHILALQH 529 (770)
Q Consensus 506 iav~~dG~-lyvaD~~~~~I~~i~~ 529 (770)
++++|||. ||+++..++.|..+..
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEE
Confidence 99999996 7899887777665543
No 68
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=5.9e-11 Score=123.88 Aligned_cols=221 Identities=11% Similarity=0.030 Sum_probs=155.9
Q ss_pred CCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEE
Q psy4832 190 DGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAV 266 (770)
Q Consensus 190 dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~va 266 (770)
.|++++++. ++|..+++ +|++...+... ....+..++++| +|+++++ .+++|+.+ +++|.+.--.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~p-dG~ilvs--~~~~V~~~-------d~~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATK-AGEILFS--YSKGAKMI-------TRDGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC--TTCCCCEEEECT-TSCEEEE--CBSEEEEE-------CTTSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECC-CCCEEEe--CCCCEEEE-------CCCCCEEEEE
Confidence 356666655 58999998 89988776532 224688999997 8899995 35789988 5677654333
Q ss_pred CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-C--eEEECCCCcEEEeecCCCCCCCcCCCccCCC
Q psy4832 267 GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-N--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRS 343 (770)
Q Consensus 267 G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~ 343 (770)
..+.. ....++.+.++|+++|++.. + |..++++|++..-++.....
T Consensus 72 ~~~~~--------------------~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~----------- 120 (276)
T 3no2_A 72 AAPAG--------------------CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI----------- 120 (276)
T ss_dssp ECCTT--------------------CEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC-----------
T ss_pred cCCCC--------------------ccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC-----------
Confidence 22110 02446778899999999876 5 88899999765444321100
Q ss_pred cccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccc
Q psy4832 344 FPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVR 421 (770)
Q Consensus 344 ~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (770)
...+.+|.++++++ +|+++|++ +++|+.++++|++....+.+
T Consensus 121 ----~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~------------------------------- 164 (276)
T 3no2_A 121 ----ERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLLNSVKLS------------------------------- 164 (276)
T ss_dssp ----SSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECS-------------------------------
T ss_pred ----CcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEEEEEECC-------------------------------
Confidence 12345688899998 99999998 68999999999876655432
Q ss_pred ccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-CcEEEeecCccCCCCCcCCCCCcccccCccCcccccceec
Q psy4832 422 ASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARF 500 (770)
Q Consensus 422 a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l 500 (770)
..|.++++.++|+++|++..+++ |..++++ |++.--.+... ....+|
T Consensus 165 ------~~~~~~~~~~~g~~~v~~~~~~~---v~~~d~~tG~~~w~~~~~~-----------------------~~~~~l 212 (276)
T 3no2_A 165 ------GTPFSSAFLDNGDCLVACGDAHC---FVQLNLESNRIVRRVNAND-----------------------IEGVQL 212 (276)
T ss_dssp ------SCCCEEEECTTSCEEEECBTTSE---EEEECTTTCCEEEEEEGGG-----------------------SBSCCC
T ss_pred ------CCccceeEcCCCCEEEEeCCCCe---EEEEeCcCCcEEEEecCCC-----------------------CCCccc
Confidence 13677888999999999998875 7888987 98654332210 011246
Q ss_pred CCeeEEEEcCCCcEEEEcCCC
Q psy4832 501 TSISALSVSPDGVVNVADQGS 521 (770)
Q Consensus 501 ~~P~giav~~dG~lyvaD~~~ 521 (770)
..|.++++.++|.+||++...
T Consensus 213 ~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp SEEEEEEECTTSCEEEEEECT
T ss_pred cccccceEcCCCCEEEEeccC
Confidence 779999999999999998643
No 69
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.41 E-value=1.3e-11 Score=133.54 Aligned_cols=268 Identities=13% Similarity=0.127 Sum_probs=155.6
Q ss_pred eeecCCCeEEECCCccEEecccCCCeEEEEeccCccC-CccCCCCCcccccccccCceEEEEcC----CCCEEEEeC---
Q psy4832 127 HYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQR-PLVCKDCDGVARDARLLTPVALTSGP----DGSLYVGDF--- 198 (770)
Q Consensus 127 ~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~-~~~~~~~~g~~~~~~l~~P~~la~~~----dG~lyv~d~--- 198 (770)
.|+.|.++....||..+|+++ ..+.|.++..+|... .+.- -..........|.+|+++| +|.|||++.
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e-~~G~i~~~~~~g~~~~~~~~---~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~ 91 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITL-RGGELRHWQAGKGLSAPLSG---VPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG 91 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEE-TTTEEEEEETTTEECCCCBS---CCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEEC
T ss_pred CCCCcEEEEEcCCCCEEEEEe-CCceEEEEeCCCceeeEecC---CcccccCCCCCceeEEECCCCCCCCEEEEEEeCCC
Confidence 477899999999996589998 678998887666532 1110 0000112234679999999 599999974
Q ss_pred ------ceEEEEcCCC---cE---EEEec-cCc--ccccceeEEEEeCCCCcEEEEeCC-------------CcEEEEEe
Q psy4832 199 ------NLVRRLTPEG---NV---FTVLQ-LSA--TQVSYQYYLALSPADGHLYISDAE-------------KHQILRVL 250 (770)
Q Consensus 199 ------~~I~~i~~~G---~v---~~~~~-~~~--~~~~~p~~lav~p~~g~lyvsd~~-------------~~~I~~i~ 250 (770)
++|.|++.++ ++ ..++. .+. .....+.+|+++| +|.|||+... .++|+|++
T Consensus 92 ~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 3788876432 22 22332 221 2345588999998 8999999643 35899994
Q ss_pred ccCCccCCCCcEEEEECCCccccCCCCCCcCCC---cccccccccCcceEEEcc-CCcEEEEeCCC-----eEEECCCCc
Q psy4832 251 SLESVADPSINWEVAVGSGERCIPGDETNCGDN---GPALAAKLSHPKGLAIKA-DKTMFIADGTN-----IRVVSPEGI 321 (770)
Q Consensus 251 ~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~---g~~~~a~l~~P~gIavd~-~G~lYvaD~~~-----Ir~id~~G~ 321 (770)
++|.+ |.++.+.+.. .......+.+|.||++|+ +|.||++|.+. |.++.+.+.
T Consensus 171 -------~dG~~-----------p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~n 232 (353)
T 2g8s_A 171 -------DQGEI-----------PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKN 232 (353)
T ss_dssp -------TTSCC-----------CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCB
T ss_pred -------CCCCC-----------CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCc
Confidence 44431 1111121111 111223467899999999 89999999763 444433221
Q ss_pred EEEeecCCCC--CCCcCCCccCC----Ccc-cccc-----cccCcceEEEeC------CCCeEEEEe--CCEEEEEcCCC
Q psy4832 322 IHTLIGHHKH--HNIWSPFNCHR----SFP-ASTA-----QLQWPTGLALSP------LDDSLHFID--DRVIFKLTNDL 381 (770)
Q Consensus 322 i~t~~g~~~~--~~~~~p~~~~~----~~~-~~~~-----~l~~P~gla~d~------~~g~lyv~D--~~~I~~i~~~G 381 (770)
. |-... ...|.+..+.. ..+ .... ....|.|+++.. .+|.|||+| .++|++++.++
T Consensus 233 y----Gwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~ 308 (353)
T 2g8s_A 233 Y----GWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG 308 (353)
T ss_dssp C----CTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET
T ss_pred C----CCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC
Confidence 0 10000 00011111100 000 0000 113689999974 158999999 68999988543
Q ss_pred -cEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEE-eCCCCceeeE
Q psy4832 382 -KVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIA-DIDARKVNAL 454 (770)
Q Consensus 382 -~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVa-D~~~~ri~~i 454 (770)
.+.... . + ....+..|.+|+++|+|.|||+ |..+++|.||
T Consensus 309 ~~~~~~~--~------------------------------~-~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 309 DKVTEDG--R------------------------------I-LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp TEEEEEE--E------------------------------E-SGGGCCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred CeEeeeE--E------------------------------c-ccCCCCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 221100 0 0 0112357999999999999997 5566665444
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=3.6e-11 Score=128.20 Aligned_cols=232 Identities=16% Similarity=0.194 Sum_probs=150.2
Q ss_pred cCCCeEEECCCccEEecccCCCeEEEEeccC-ccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC------ceEE
Q psy4832 130 FHEGILQKGDGSSLHLKHEFPRTVSVVMGTG-LQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF------NLVR 202 (770)
Q Consensus 130 ~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G-~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~------~~I~ 202 (770)
.++++.+..+|. +|+.+...+.|..+...+ ....+. ...-..|.+|+++++|.|||++. +.|.
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~---------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPF---------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp CEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEE---------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred cccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEe---------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 456778888885 776654566777775432 222110 01124699999999999999986 3799
Q ss_pred EEcCCCcE-EEEeccCcccccceeEEEEeCCCCcEEEEeCC------CcEEEEEeccCCccCCCC-cEEEEECCCccccC
Q psy4832 203 RLTPEGNV-FTVLQLSATQVSYQYYLALSPADGHLYISDAE------KHQILRVLSLESVADPSI-NWEVAVGSGERCIP 274 (770)
Q Consensus 203 ~i~~~G~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~------~~~I~~i~~~~~~~~~~g-~~~~vaG~g~~~~p 274 (770)
++++++.. ..++.. ......|.+++++| +|.+|+++.. ...|++++ +++ .+..+..
T Consensus 116 ~~d~~~~~~~~~~~~-~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~------- 179 (333)
T 2dg1_A 116 AATENGDNLQDIIED-LSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVS-------PDFRTVTPIIQ------- 179 (333)
T ss_dssp EECTTSCSCEEEECS-SSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEEC-------TTSCCEEEEEE-------
T ss_pred EEeCCCCEEEEEEcc-CccCCcccceEECC-CCCEEEEeccccccCCCceEEEEe-------CCCCEEEEeec-------
Confidence 99987643 334321 12345789999997 8999999875 46888883 432 4433321
Q ss_pred CCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECC--CCc-EEEeecCCCCCCCcCCCccCCCccccc
Q psy4832 275 GDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSP--EGI-IHTLIGHHKHHNIWSPFNCHRSFPAST 348 (770)
Q Consensus 275 ~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~--~G~-i~t~~g~~~~~~~~~p~~~~~~~~~~~ 348 (770)
.+..|.+|+++++|. ||+++..+ |++++. +|. +..+..... ...
T Consensus 180 ---------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~---------------~~~ 229 (333)
T 2dg1_A 180 ---------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP---------------YYF 229 (333)
T ss_dssp ---------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE---------------EEC
T ss_pred ---------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE---------------Eec
Confidence 134688999999986 99998643 888775 443 332210000 000
Q ss_pred ccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccc
Q psy4832 349 AQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMD 426 (770)
Q Consensus 349 ~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 426 (770)
.....|.+|++++ +|+|||++ ++.|++++++|+.......+.. ....
T Consensus 230 ~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~------------------------------~~g~ 278 (333)
T 2dg1_A 230 TGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR------------------------------DEGH 278 (333)
T ss_dssp CSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEEEEECTTG------------------------------GGTC
T ss_pred CCCCCCCceEECC-CCCEEEEEcCCCEEEEECCCCCEEEEEEcCCC------------------------------cccc
Confidence 0123689999999 99999998 6899999998875433322110 0112
Q ss_pred cCCeeEEEEcCCC-CEEEEeCCC
Q psy4832 427 LGSLTALAFSPTG-DLYIADIDA 448 (770)
Q Consensus 427 l~~P~giavd~~G-~lyVaD~~~ 448 (770)
+..|.+++++++| .|||+....
T Consensus 279 ~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 279 MLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SCBCCEEEECTTSCEEEEEEECG
T ss_pred ccCcceEEECCCCCEEEEEeCcc
Confidence 3468999999986 699988763
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.38 E-value=1.2e-09 Score=116.83 Aligned_cols=241 Identities=14% Similarity=0.163 Sum_probs=156.9
Q ss_pred cCceEEEEcCCC-CEEEEeC--------ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 180 LTPVALTSGPDG-SLYVGDF--------NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 180 ~~P~~la~~~dG-~lyv~d~--------~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
..|.+++++|+| .||+++. +.|.+++.+ +++...+.. ...|.+++++|.++.+|+++...+.|..+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 468899999987 5888883 479999964 666665542 23489999998555699999998999999
Q ss_pred eccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC--CC-eEEECCC-CcEEE
Q psy4832 250 LSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG--TN-IRVVSPE-GIIHT 324 (770)
Q Consensus 250 ~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~--~~-Ir~id~~-G~i~t 324 (770)
+. .++........+.. .. ........|.+++++++|. ||+++. .. |+++|.. +++..
T Consensus 117 d~------~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 117 DA------KTGEVKGRLVLDDR-------KR-----TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp ET------TTCCEEEEEESCCC-------CC-----CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred eC------CCCeeEEEEecCCC-------cc-----ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 53 23443322221110 00 0001122488999999887 899883 23 8888864 55444
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCcc
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRD 402 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~ 402 (770)
.+... -..|.+++++|.+..||+++ ++.|+.++. ++++......+..
T Consensus 179 ~~~~~---------------------~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------- 227 (353)
T 3vgz_A 179 AIQNT---------------------GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD---------- 227 (353)
T ss_dssp EECCC---------------------CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS----------
T ss_pred EecCC---------------------CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC----------
Confidence 33211 12478999999334588888 578989984 4554433321110
Q ss_pred ccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCC
Q psy4832 403 FKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTT 480 (770)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~ 480 (770)
.....|.+++++|+|. ||+++...+. |..++. ++++.....
T Consensus 228 ----------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~---v~~~d~~~~~~~~~~~------------ 270 (353)
T 3vgz_A 228 ----------------------GKEHFFINISLDTARQRAFITDSKAAE---VLVVDTRNGNILAKVA------------ 270 (353)
T ss_dssp ----------------------SSCCCEEEEEEETTTTEEEEEESSSSE---EEEEETTTCCEEEEEE------------
T ss_pred ----------------------CCCcccceEEECCCCCEEEEEeCCCCE---EEEEECCCCcEEEEEE------------
Confidence 0123588999999987 9999987664 666775 555433221
Q ss_pred CCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEeeec
Q psy4832 481 NCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILALQH 529 (770)
Q Consensus 481 ~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i~~ 529 (770)
+..|.+++++|+|. +|+++..++.|..++.
T Consensus 271 -------------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 271 -------------------APESLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp -------------------CSSCCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -------------------cCCCceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 12356799999997 8999987777776654
No 72
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.34 E-value=5.7e-11 Score=127.46 Aligned_cols=204 Identities=16% Similarity=0.187 Sum_probs=133.1
Q ss_pred cceeEEEEeCCCCcEEEEe------------CCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccc
Q psy4832 222 SYQYYLALSPADGHLYISD------------AEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAA 289 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd------------~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a 289 (770)
..|.+|+++| +|.+|++. ...++|++++.. ++++....+.-.+.. + ...
T Consensus 50 ~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~----~~~~~~~~l~~~g~~-------~-------~~~ 110 (355)
T 3sre_A 50 NGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLN----EKEPAVSELEIIGNT-------L-------DIS 110 (355)
T ss_dssp SCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETT----SSSCCEEECEEECSS-------C-------CGG
T ss_pred CCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecC----CCCCceEEEEccCCC-------C-------CcC
Confidence 5689999987 89999986 246788888542 122344433321100 0 011
Q ss_pred cccCcceEEEcc--CC--cEEEEeCCC------eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEE
Q psy4832 290 KLSHPKGLAIKA--DK--TMFIADGTN------IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLAL 359 (770)
Q Consensus 290 ~l~~P~gIavd~--~G--~lYvaD~~~------Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~ 359 (770)
.| .|.||.+.+ +| .|||++... |.++++++...+++..-. ...|+.|+++++
T Consensus 111 ~f-~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~-----------------g~~~~~pND~~v 172 (355)
T 3sre_A 111 SF-NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR-----------------HKLLPSVNDIVA 172 (355)
T ss_dssp GC-CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC-----------------CTTCSSEEEEEE
T ss_pred ce-eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc-----------------cCCCCCCceEEE
Confidence 12 799999965 45 599998662 777888876666553311 125889999999
Q ss_pred eCCCCeEEEEeC-------------------CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcc
Q psy4832 360 SPLDDSLHFIDD-------------------RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSV 420 (770)
Q Consensus 360 d~~~g~lyv~D~-------------------~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (770)
++ +|.+||++. ++|+++++. +++.++
T Consensus 173 ~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~~~~~~--------------------------------- 217 (355)
T 3sre_A 173 VG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-DVRVVA--------------------------------- 217 (355)
T ss_dssp EE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-CCEEEE---------------------------------
T ss_pred eC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-eEEEee---------------------------------
Confidence 99 999999863 357777663 444333
Q ss_pred cccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCccccccee
Q psy4832 421 RASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTAR 499 (770)
Q Consensus 421 ~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 499 (770)
..+..|+||+++|+|. |||+|+..++|.+. .++.+|.+.... . | . .
T Consensus 218 ----~~l~~pNGia~spDg~~lYvadt~~~~I~~~-~~~~~g~l~~~~--~--------------~---------~---~ 264 (355)
T 3sre_A 218 ----EGFDFANGINISPDGKYVYIAELLAHKIHVY-EKHANWTLTPLR--V--------------L---------S---F 264 (355)
T ss_dssp ----EEESSEEEEEECTTSSEEEEEEGGGTEEEEE-EECTTSCEEEEE--E--------------E---------E---C
T ss_pred ----cCCcccCcceECCCCCEEEEEeCCCCeEEEE-EECCCCcEecCE--E--------------E---------e---C
Confidence 2357799999999985 99999998875433 234567653311 0 0 0 0
Q ss_pred cCCeeEEEEcC-CCcEEEEcC-CCceEEeeecC
Q psy4832 500 FTSISALSVSP-DGVVNVADQ-GSLHILALQHY 530 (770)
Q Consensus 500 l~~P~giav~~-dG~lyvaD~-~~~~I~~i~~~ 530 (770)
-..|.|+++|+ +|.||++.. +..+|.++.+.
T Consensus 265 ~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 265 DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 13599999999 599999764 55677777554
No 73
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.33 E-value=2.9e-10 Score=121.45 Aligned_cols=227 Identities=17% Similarity=0.183 Sum_probs=136.8
Q ss_pred cccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceE
Q psy4832 218 ATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGL 297 (770)
Q Consensus 218 ~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gI 297 (770)
+..+..|.+|++.| +|.|||++...++|++++. .++..+.+.+.... .. .....|.||
T Consensus 28 a~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~------~~g~~~~v~~~~~v------~~---------~g~~GllGi 85 (347)
T 3das_A 28 ATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDA------KTGRKTELGEVPGV------SP---------SGEGGLLGI 85 (347)
T ss_dssp ECCCSSEEEEEECT-TSCEEEEETTTCEEEEECT------TTCCEEEEEECTTC------CC---------BTTBSEEEE
T ss_pred ecCCCCceEEEEcC-CCcEEEEEecCCEEEEEEC------CCCcEeeecccCce------ee---------cCCCCceee
Confidence 45788999999998 8999999998899999942 23555555432211 01 113468899
Q ss_pred EEcc----CCcEEEEeC---CC-eEEECCCC---------cEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEe
Q psy4832 298 AIKA----DKTMFIADG---TN-IRVVSPEG---------IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALS 360 (770)
Q Consensus 298 avd~----~G~lYvaD~---~~-Ir~id~~G---------~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d 360 (770)
|+++ +|.|||+.+ .+ |.++..++ ...+++-. .+ .....++..|+++
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~---------------~p--~~~~H~g~~l~fg 148 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRG---------------IP--KGVIHNGGRIAFG 148 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEE---------------EC--CCSSCCCCCEEEC
T ss_pred EeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEc---------------CC--CCCCccCccccCC
Confidence 9997 488999753 22 66664332 11111100 00 0123457789999
Q ss_pred CCCCeEEEEe---------------CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccccc
Q psy4832 361 PLDDSLHFID---------------DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNM 425 (770)
Q Consensus 361 ~~~g~lyv~D---------------~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 425 (770)
| +|.|||+. .++|+||+++|.+ -.+.|... ......
T Consensus 149 p-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i--p~~nPf~~--------------------------~~i~a~ 199 (347)
T 3das_A 149 P-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP--APGNPFPG--------------------------SPVYSY 199 (347)
T ss_dssp T-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB--CTTCSSTT--------------------------CCEEEB
T ss_pred C-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc--cCCCCCCC--------------------------CeEEee
Confidence 9 99999993 2689999999863 11111100 001223
Q ss_pred ccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceec----C
Q psy4832 426 DLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARF----T 501 (770)
Q Consensus 426 ~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l----~ 501 (770)
.+.+|.||+++++|.||++|.+......|..+.+.+. .| ...|... +. ..........+ .
T Consensus 200 G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~n----yG-----wP~~~g~-~~------~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 200 GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDN----YG-----WPEAEGK-GG------GSGFHDPVAQWSTDEA 263 (347)
T ss_dssp CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCB----CC-----TTTCCSS-CC------CTTCCCCSEEECTTTC
T ss_pred CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCE----ec-----CCcccCC-CC------CccccCCcEecCCCCC
Confidence 4788999999999999999987654334444432211 11 1122110 00 00010111111 3
Q ss_pred CeeEEEEcCCCcEEEEcCCCceEEeeec
Q psy4832 502 SISALSVSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 502 ~P~giav~~dG~lyvaD~~~~~I~~i~~ 529 (770)
.|+||++. +|.+|+++..+.+|.++..
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~ 290 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPL 290 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEE
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEe
Confidence 79999998 6899999998888887744
No 74
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.33 E-value=1.3e-09 Score=115.63 Aligned_cols=219 Identities=14% Similarity=0.172 Sum_probs=141.6
Q ss_pred CCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcE-EEE
Q psy4832 190 DGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINW-EVA 265 (770)
Q Consensus 190 dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~-~~v 265 (770)
.+.+|+++. +.|+.++.+ |+....+.. ....| +++++|.+..||+++...++|++++.. ++.+ ...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~------~~~~~~~~ 78 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQ------LEPPKVVA 78 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECS------SSSCEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECC------CCceeEEe
Confidence 566788886 589999864 777665532 34556 999998555699999988899999642 2332 111
Q ss_pred ECCCccccCCCCCCcCCCcccccccccCcce-EEEccCCc-EEEEeCC----CeEEECCC-CcEEEeecCCCCCCCcCCC
Q psy4832 266 VGSGERCIPGDETNCGDNGPALAAKLSHPKG-LAIKADKT-MFIADGT----NIRVVSPE-GIIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 266 aG~g~~~~p~~~~~~g~~g~~~~a~l~~P~g-Iavd~~G~-lYvaD~~----~Ir~id~~-G~i~t~~g~~~~~~~~~p~ 338 (770)
.. .-..|.. ++++++|. ||++... .|++++.+ +.+...+..+
T Consensus 79 ~~----------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------- 127 (331)
T 3u4y_A 79 IQ----------------------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--------- 127 (331)
T ss_dssp EE----------------------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC---------
T ss_pred cc----------------------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC---------
Confidence 11 0124667 99999987 6655544 48888864 4444333211
Q ss_pred ccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCE---EEEEcCCCcEEEEecCCCCCCCCCCCCcccccccccccc
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRV---IFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKK 412 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~---I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~ 412 (770)
..|.+++++| +|+ ||+++ .+. ++.++.+|.+........
T Consensus 128 -------------~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~--------------------- 172 (331)
T 3u4y_A 128 -------------YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI--------------------- 172 (331)
T ss_dssp -------------TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE---------------------
T ss_pred -------------CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccc---------------------
Confidence 2478999999 775 99997 244 455556665432221000
Q ss_pred ccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcE----EEeecCccCCCCCcCCCCCcccc
Q psy4832 413 STVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRM----FDFAGRWQSDKKNCNTTNCAEFE 486 (770)
Q Consensus 413 ~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i----~~~aG~~~~~~~~~~~~~~~~~~ 486 (770)
..-..|.+++++|+|. ||++...++. |+.++. ++++ ..+..
T Consensus 173 ------------~~~~~~~~~~~spdg~~l~v~~~~~~~---v~v~d~~~~~~~~~~~~~~~------------------ 219 (331)
T 3u4y_A 173 ------------SGGTRPFNITFTPDGNFAFVANLIGNS---IGILETQNPENITLLNAVGT------------------ 219 (331)
T ss_dssp ------------CSSSSEEEEEECTTSSEEEEEETTTTE---EEEEECSSTTSCEEEEEEEC------------------
T ss_pred ------------cCCCCccceEECCCCCEEEEEeCCCCe---EEEEECCCCcccceeeeccC------------------
Confidence 0113489999999998 9999987765 555554 3442 22211
Q ss_pred cCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEeeecC
Q psy4832 487 KNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILALQHY 530 (770)
Q Consensus 487 ~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i~~~ 530 (770)
-..|.+++++|||. ||++..+.+.|..+...
T Consensus 220 -------------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 220 -------------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp -------------SSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred -------------CCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 13478899999997 88988877777766543
No 75
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.33 E-value=7.1e-10 Score=119.64 Aligned_cols=258 Identities=16% Similarity=0.151 Sum_probs=151.6
Q ss_pred cccCceEEEEcCCCC-EEEEeC-----ceE--EEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEE
Q psy4832 178 RLLTPVALTSGPDGS-LYVGDF-----NLV--RRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILR 248 (770)
Q Consensus 178 ~l~~P~~la~~~dG~-lyv~d~-----~~I--~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~ 248 (770)
....|..|+++|||. ||+++. +.| ..++.+ |+...+... ...-..|..+++ .+..||+++...+.|..
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~-~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ-KTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE-ECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe-ccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 456789999999997 888876 355 556665 665544321 223457889998 36789999988888887
Q ss_pred EeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEE--CCCC---
Q psy4832 249 VLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVV--SPEG--- 320 (770)
Q Consensus 249 i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~i--d~~G--- 320 (770)
++.. .++.+..+...- ...|.+..........|++++++++|. ||+++... |+.+ +..+
T Consensus 125 ~~~~-----~~g~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 125 FPIG-----QDGALLPASDVI--------EFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EEBC-----TTSCBCSCSEEE--------ECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEeC-----CCCcCcccceeE--------EccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 7542 222211100000 000111111112234678999999997 99998654 5544 5443
Q ss_pred --c-EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcC-CCcEEEEecCCCCC
Q psy4832 321 --I-IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTN-DLKVKIVAGIPLHC 393 (770)
Q Consensus 321 --~-i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~ 393 (770)
+ +........ .....-..|.+++++| +|+ ||+++ ++.|..++. +|.+..+......
T Consensus 192 ~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~- 254 (361)
T 3scy_A 192 NKEKFLTKGTPEA---------------FKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD- 254 (361)
T ss_dssp TCCCCEEEEEEEE---------------EECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC-
T ss_pred cccceeecccccc---------------eecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC-
Confidence 2 221100000 0000123588999999 775 89988 577877773 5555433311110
Q ss_pred CCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCC-CCceeeEEEEc-CCCcEEEeecCc
Q psy4832 394 RTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADID-ARKVNALRVID-STGRMFDFAGRW 470 (770)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~-~~ri~~i~~i~-~~G~i~~~aG~~ 470 (770)
...+..|.+|+++|+|+ ||+++.. .++| .+..++ .+|++..+.-..
T Consensus 255 ------------------------------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i-~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 255 ------------------------------TVNAQGSGDIHLSPDGKYLYASNRLKADGV-AIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp ------------------------------SSCCCCEEEEEECTTSSEEEEEECSSSCEE-EEEEECTTTCCEEEEEEEE
T ss_pred ------------------------------CCCCCCcccEEECCCCCEEEEECCCCCCEE-EEEEEcCCCCcEEEeeEec
Confidence 01134589999999998 8899987 6654 344455 356654432111
Q ss_pred cCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEee
Q psy4832 471 QSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILAL 527 (770)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i 527 (770)
. -..|.+++++|||. ||+++..++.|..+
T Consensus 304 ~----------------------------g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 304 T----------------------------GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp C----------------------------SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred C----------------------------CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 0 13488999999996 88998777666543
No 76
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=6e-10 Score=119.07 Aligned_cols=194 Identities=15% Similarity=0.140 Sum_probs=135.3
Q ss_pred cccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCC-cEEEEECCCccccCCCCCCcCCCcccccccccCcceEE
Q psy4832 220 QVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSI-NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLA 298 (770)
Q Consensus 220 ~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g-~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIa 298 (770)
....+.+++++|.++.||++|...++|++++ +++ ....+.- . ..|.+|+
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d-------~~~~~~~~~~~-~----------------------~~v~~i~ 96 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELH-------LASGRKTVHAL-P----------------------FMGSALA 96 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEE-------TTTTEEEEEEC-S----------------------SCEEEEE
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEE-------CCCCcEEEEEC-C----------------------CcceEEE
Confidence 3456789999987799999999989999994 333 3332210 0 1477899
Q ss_pred EccCCcEEEEeCCCeEEECC-CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC------
Q psy4832 299 IKADKTMFIADGTNIRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD------ 371 (770)
Q Consensus 299 vd~~G~lYvaD~~~Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~------ 371 (770)
++++|++|++....|++++. +|.+..+..... ......|.++++++ +|+|||++.
T Consensus 97 ~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~~~-----------------~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~ 158 (326)
T 2ghs_A 97 KISDSKQLIASDDGLFLRDTATGVLTLHAELES-----------------DLPGNRSNDGRMHP-SGALWIGTMGRKAET 158 (326)
T ss_dssp EEETTEEEEEETTEEEEEETTTCCEEEEECSST-----------------TCTTEEEEEEEECT-TSCEEEEEEETTCCT
T ss_pred EeCCCeEEEEECCCEEEEECCCCcEEEEeeCCC-----------------CCCCCCCCCEEECC-CCCEEEEeCCCcCCC
Confidence 99999999998555999986 477766543210 01234688999999 999999873
Q ss_pred --CEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCC
Q psy4832 372 --RVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDA 448 (770)
Q Consensus 372 --~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~ 448 (770)
..|++++ +|++..+.. .+..|.+++++++|+ ||+++..+
T Consensus 159 ~~~~l~~~~-~g~~~~~~~-------------------------------------~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 159 GAGSIYHVA-KGKVTKLFA-------------------------------------DISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp TCEEEEEEE-TTEEEEEEE-------------------------------------EESSEEEEEECTTSCEEEEEETTT
T ss_pred CceEEEEEe-CCcEEEeeC-------------------------------------CCcccCCeEEcCCCCEEEEEECCC
Confidence 5799998 777655431 123589999999996 99999887
Q ss_pred CceeeEEEEcC---CC-cEE---EeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCC
Q psy4832 449 RKVNALRVIDS---TG-RMF---DFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGS 521 (770)
Q Consensus 449 ~ri~~i~~i~~---~G-~i~---~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~ 521 (770)
++ |..++. +| .+. .+... ......|.+++++++|.|||++.++
T Consensus 201 ~~---I~~~d~~~~~Gl~~~~~~~~~~~---------------------------~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 201 NR---LMRVPLDARTGLPTGKAEVFIDS---------------------------TGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp CE---EEEEEBCTTTCCBSSCCEEEEEC---------------------------TTSSSEEEEEEECTTSCEEEEEETT
T ss_pred CE---EEEEEcccccCCcccCceEEEEC---------------------------CCCCCCCCeeEECCCCCEEEEEeCC
Confidence 65 555553 34 321 11100 0011358999999999999999877
Q ss_pred ceEEeeec
Q psy4832 522 LHILALQH 529 (770)
Q Consensus 522 ~~I~~i~~ 529 (770)
++|.++.+
T Consensus 251 ~~v~~~d~ 258 (326)
T 2ghs_A 251 GAVDRYDT 258 (326)
T ss_dssp TEEEEECT
T ss_pred CEEEEECC
Confidence 78888765
No 77
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.31 E-value=6.4e-10 Score=113.60 Aligned_cols=214 Identities=14% Similarity=0.152 Sum_probs=137.3
Q ss_pred cCceEEEEcCC-CCEEE-EeC-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 180 LTPVALTSGPD-GSLYV-GDF-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 180 ~~P~~la~~~d-G~lyv-~d~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
..+.+|+++|+ +.||+ .|. ++|.+++++|++...+.. .++..+.||++.+ ++.++|++..+++++.+..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l--~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v----- 98 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL--DFVKDLETIEYIG-DNQFVISDERDYAIYVISL----- 98 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC--SSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE-----
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec--CCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc-----
Confidence 46899999995 56887 454 499999999999877643 3457899999995 8889999998999988854
Q ss_pred CCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCC-cEEEEeCCC---eEEEC--CCCcEEEeecCCC
Q psy4832 257 DPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADK-TMFIADGTN---IRVVS--PEGIIHTLIGHHK 330 (770)
Q Consensus 257 ~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G-~lYvaD~~~---Ir~id--~~G~i~t~~g~~~ 330 (770)
+.++.+..+.-... +. +. ...=....|||+|+.+ .||++.... |+.++ ..+.-.++....
T Consensus 99 ~~~~~i~~~~~~~~---~~-----~~-----~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~- 164 (255)
T 3qqz_A 99 TPNSEVKILKKIKI---PL-----QE-----SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDK- 164 (255)
T ss_dssp CTTCCEEEEEEEEC---CC-----SS-----CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECH-
T ss_pred CCCCeeeeeeeecc---cc-----cc-----ccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecch-
Confidence 23343222211000 00 00 0001135899999976 699886443 66665 111000111000
Q ss_pred CCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 331 HHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
.......+..+.+|++||..+.|||.. +++|..++.+|++....-....+
T Consensus 165 -------------~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~--------------- 216 (255)
T 3qqz_A 165 -------------ALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGS--------------- 216 (255)
T ss_dssp -------------HHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTG---------------
T ss_pred -------------hhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCcc---------------
Confidence 000012345689999999999999987 68999999999866544221111
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS 459 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~ 459 (770)
......+.+|.|||+|++|+|||+...| . +.++.+
T Consensus 217 ------------~~l~~~~~qpEGia~d~~G~lyIvsE~n-~---~y~f~~ 251 (255)
T 3qqz_A 217 ------------RGLSHNIKQAEGVAMDASGNIYIVSEPN-R---FYRFTP 251 (255)
T ss_dssp ------------GGCSSCCCSEEEEEECTTCCEEEEETTT-E---EEEEEC
T ss_pred ------------CCcccccCCCCeeEECCCCCEEEEcCCc-e---EEEEEe
Confidence 0122346789999999999999997765 3 555544
No 78
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.30 E-value=2.5e-06 Score=97.58 Aligned_cols=491 Identities=15% Similarity=0.171 Sum_probs=253.1
Q ss_pred CeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC--ceEEEEcCCCcE
Q psy4832 133 GILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF--NLVRRLTPEGNV 210 (770)
Q Consensus 133 gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v 210 (770)
.+.+.+||..+.... ..+.|.+..-+|..... ....-....+|++.|||.+.++-. +.|+.++.+|+.
T Consensus 21 ~~a~spdg~~las~~-~d~~v~iWd~~~~~~~~---------l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~ 90 (577)
T 2ymu_A 21 GVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQT---------LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL 90 (577)
T ss_dssp EEEECTTSSCEEEEE-TTSEEEEECTTSCEEEE---------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE
T ss_pred EEEECCCCCEEEEEe-CCCEEEEEECCCCEEEE---------EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCE
Confidence 455566776555444 55566655533332100 000112346899999999776543 578888888887
Q ss_pred EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc----cCCCCcEEEEECC------------CccccC
Q psy4832 211 FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV----ADPSINWEVAVGS------------GERCIP 274 (770)
Q Consensus 211 ~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~----~~~~g~~~~vaG~------------g~~~~p 274 (770)
...+. ........++++| ++...++-...+.+...+..... ......+..+.-. +.....
T Consensus 91 ~~~~~---~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 166 (577)
T 2ymu_A 91 LQTLT---GHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 166 (577)
T ss_dssp EEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEEE---CCCCCEEEEEECC-CCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceecc
Confidence 66553 2233467899998 66665555554555444321100 0001111111000 000000
Q ss_pred CCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCCC-eEEECCCCcEEEeecCCCCCCCcCCCccCCCccccccccc
Q psy4832 275 GDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQ 352 (770)
Q Consensus 275 ~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~ 352 (770)
...+...............+++.++|.+.++ .... |+..+.++......... -.
T Consensus 167 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~---------------------~~ 222 (577)
T 2ymu_A 167 ---NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH---------------------SS 222 (577)
T ss_dssp ---CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECC---------------------SS
T ss_pred ---ccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecC---------------------CC
Confidence 0000000000111123346777888875444 3333 77778777544332111 11
Q ss_pred CcceEEEeCCCCeE-EEEe-CCEEEEEcCCCcEEE-EecCCCCCCCCCCCCccccccccccccccccCCcccccccccCC
Q psy4832 353 WPTGLALSPLDDSL-HFID-DRVIFKLTNDLKVKI-VAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGS 429 (770)
Q Consensus 353 ~P~gla~d~~~g~l-yv~D-~~~I~~i~~~G~v~~-vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 429 (770)
...+++++| ++.+ ..+. ++.|+..+.+++... +.+. -..
T Consensus 223 ~v~~~~~s~-dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~-------------------------------------~~~ 264 (577)
T 2ymu_A 223 SVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGH-------------------------------------SSS 264 (577)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECCC-------------------------------------SSC
T ss_pred CEEEEEECC-CCCEEEEEeCCCEEEEEeCCCCEEEEEecC-------------------------------------CCC
Confidence 356899999 7764 4444 567777777765332 2221 123
Q ss_pred eeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEee-cCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEE
Q psy4832 430 LTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFA-GRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSV 508 (770)
Q Consensus 430 P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~a-G~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav 508 (770)
..++++.|+|..+++-...+. |+..+.+++..... |.. ....++++
T Consensus 265 v~~v~~~~d~~~l~~~~~d~~---i~~w~~~~~~~~~~~~h~------------------------------~~v~~~~~ 311 (577)
T 2ymu_A 265 VNGVAFRPDGQTIASASDDKT---VKLWNRNGQLLQTLTGHS------------------------------SSVWGVAF 311 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSC---EEEEETTSCEEEEECCCS------------------------------SCEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCE---EEEEeCCCcEEEEEecCC------------------------------CCeEEEEE
Confidence 688999999987776655553 56666666643322 111 12456777
Q ss_pred cCCCcEEEEcCCCceEEeeec----------CCc-----ccCCCCcEEEeCCCCCcEEEEecCCceEEEEcCCCCCcEEE
Q psy4832 509 SPDGVVNVADQGSLHILALQH----------YLP-----THDEHGEFKIPYPATNEIYVFNRYGQHITTRDMTSGKPRYS 573 (770)
Q Consensus 509 ~~dG~lyvaD~~~~~I~~i~~----------~~~-----~~~~~g~~~i~~~~~~e~yvfd~~G~~~~t~d~~tg~~~y~ 573 (770)
+|+|..+++-..++.|+.... +.. .....+.+-+.....+.+.+++..++.+.+...... ....
T Consensus 312 ~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~-~v~~ 390 (577)
T 2ymu_A 312 SPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS-SVRG 390 (577)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSS-CEEE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCC-CeEE
Confidence 777765554333333322211 110 011233333333445667778887777776655443 2344
Q ss_pred EEecCCCCCCceEEEECCCCCEEEEEEcCCCcce-E-----------eccCCccc--cCCCCcceeecceeeeeecCceE
Q psy4832 574 FLYSKNTSFGKLSTITDASGNKINFLRDYSNVAQ-L-----------QWPTGLAL--SPLDDSLHFIDDRVIFKLTNDLK 639 (770)
Q Consensus 574 ~~Yd~~~~~G~L~~vtd~~G~~~~~~~d~~~~~~-~-----------~~p~G~~~--~~~d~~~~~~~~~~~~~~~~g~l 639 (770)
..+..+ |++......+| .+++..-..++.. + ..|++..+ ...|+. ..+-...+++
T Consensus 391 ~~~s~d---g~~l~~~~~d~-~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-------v~~w~~~~~~ 459 (577)
T 2ymu_A 391 VAFSPD---GQTIASASDDK-TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-------VKLWNRNGQL 459 (577)
T ss_dssp EEECTT---SSCEEEEETTS-EEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-------EEEEETTSCE
T ss_pred EEECCC---CCEEEEEeCCC-EEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-------EEEEECCCCE
Confidence 555555 65544443333 2333221112111 1 22333210 111111 1111235555
Q ss_pred EEEEec-CCceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCeeEEEEEeCCCCeEEEEEEccCCcEeEEEecCcEEEE
Q psy4832 640 IRALKK-GRFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQVTHIYSPRYGKLISLVYDERGFLIFAQMFRHKYYI 718 (770)
Q Consensus 640 ~~~~~~-~g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~~~~~~~p~~g~~~~~~yd~~G~l~~~~~~~~~~~~ 718 (770)
++.... .+....-.+.+.|++++.-..+|.+. .|+-... .+..+... .+.+....+.++|++++.-..+... .
T Consensus 460 ~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~--iw~~~~~--~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v-~ 533 (577)
T 2ymu_A 460 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK--LWNRNGQ--LLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTV-K 533 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEETTSEEE--EEETTSC--EEEEEECC-SSCEEEEEECTTSSCEEEEETTSEE-E
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE--EEcCCCC--EEEEEeCC-CCCEEEEEEcCCCCEEEEEECcCEE-E
Confidence 555544 33444567788899888777788444 4443322 23333334 6788899999999987766555443 3
Q ss_pred EeCCCCCeEEEEcCCCCEEEEEEeCCCCceEE
Q psy4832 719 ATDQCGTPVMVFNQYGETVREIMRSPYGHIVY 750 (770)
Q Consensus 719 ~~d~~G~~~~~~d~~G~~v~~~~yd~~G~~~~ 750 (770)
+.|..|.++.........|+.+...|.|+.+.
T Consensus 534 lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 534 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp EECTTSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 45778888887777666788888888888663
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.29 E-value=1.6e-09 Score=114.91 Aligned_cols=272 Identities=10% Similarity=0.077 Sum_probs=162.2
Q ss_pred ECCCccEEecccCCCeEEEEecc-CccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC--ceEEEEcCC-CcE-
Q psy4832 137 KGDGSSLHLKHEFPRTVSVVMGT-GLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF--NLVRRLTPE-GNV- 210 (770)
Q Consensus 137 ~~dG~~~~~~~~~~~~i~~v~g~-G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~--~~I~~i~~~-G~v- 210 (770)
..++..+|++....+.|.++... |..... .......| +++++|+|. ||+++. +.|++++.+ +++
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~---------~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQ---------ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEE---------EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeee---------EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 34555677776566777777642 222110 01123456 999999997 898887 489999874 554
Q ss_pred EEEeccCcccccceeE-EEEeCCCCcEEEEeCCCc--EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccc
Q psy4832 211 FTVLQLSATQVSYQYY-LALSPADGHLYISDAEKH--QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPAL 287 (770)
Q Consensus 211 ~~~~~~~~~~~~~p~~-lav~p~~g~lyvsd~~~~--~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~ 287 (770)
...+. ....|.. ++++|.+..||++....+ .|+.++. .++........
T Consensus 76 ~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~------~~~~~~~~~~~------------------- 126 (331)
T 3u4y_A 76 VVAIQ----EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSF------LKNKFISTIPI------------------- 126 (331)
T ss_dssp EEEEE----ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEET------TTTEEEEEEEC-------------------
T ss_pred EEecc----cCCCCccceEECCCCCEEEEecCCCCcccEEEEEC------CCCCeEEEEEC-------------------
Confidence 33332 2245777 999985556774444434 8888853 12333222111
Q ss_pred cccccCcceEEEccCCc-EEEEeCC--C-eE--EECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeC
Q psy4832 288 AAKLSHPKGLAIKADKT-MFIADGT--N-IR--VVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSP 361 (770)
Q Consensus 288 ~a~l~~P~gIavd~~G~-lYvaD~~--~-Ir--~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~ 361 (770)
-..|.+++++++|+ ||+++.. . |+ .++.+|.+........ ..-..|.+++++|
T Consensus 127 ---~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~------------------~~~~~~~~~~~sp 185 (331)
T 3u4y_A 127 ---PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI------------------SGGTRPFNITFTP 185 (331)
T ss_dssp ---CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE------------------CSSSSEEEEEECT
T ss_pred ---CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc------------------cCCCCccceEECC
Confidence 12478999999996 9998753 3 44 4556665533220000 0112488999999
Q ss_pred CCCe-EEEEe--CCEEEEEcCC-CcE----EEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEE
Q psy4832 362 LDDS-LHFID--DRVIFKLTND-LKV----KIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTAL 433 (770)
Q Consensus 362 ~~g~-lyv~D--~~~I~~i~~~-G~v----~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~gi 433 (770)
+|+ ||+++ ++.|..++.. +++ ..+.. -..|.++
T Consensus 186 -dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--------------------------------------~~~~~~~ 226 (331)
T 3u4y_A 186 -DGNFAFVANLIGNSIGILETQNPENITLLNAVGT--------------------------------------NNLPGTI 226 (331)
T ss_dssp -TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--------------------------------------SSCCCCE
T ss_pred -CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--------------------------------------CCCCceE
Confidence 776 99998 5788888843 442 22210 1347899
Q ss_pred EEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCC
Q psy4832 434 AFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPD 511 (770)
Q Consensus 434 avd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~d 511 (770)
+++|+|. ||++....+. |..++. +|++..+.... ... ...........+++++||
T Consensus 227 ~~spdg~~l~v~~~~~~~---i~~~d~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~~spd 283 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVD---VFNFNQLSGTLSFVKSFG-HGL-------------------LIDPRPLFGANQMALNKT 283 (331)
T ss_dssp EECTTSSEEEEECSSEEE---EEEEETTTTEEEEEEEEE-CCC-------------------CCCCGGGTTCCCEEECTT
T ss_pred EECCCCCEEEEEEcCCCE---EEEEECCCCceeeecccc-ccc-------------------ccCCCCcccccceEECCC
Confidence 9999998 8898876553 667775 56664432111 000 000011122357999999
Q ss_pred Cc-EEEEcCCCceEEeeecC
Q psy4832 512 GV-VNVADQGSLHILALQHY 530 (770)
Q Consensus 512 G~-lyvaD~~~~~I~~i~~~ 530 (770)
|. ||++...++.|..++..
T Consensus 284 g~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 284 ETKLFISANISRELKVFTIS 303 (331)
T ss_dssp SSEEEEEETTTTEEEEEETT
T ss_pred CCEEEEecCCCCcEEEEEec
Confidence 95 78888877777665543
No 80
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.26 E-value=4.5e-10 Score=120.44 Aligned_cols=188 Identities=11% Similarity=0.148 Sum_probs=123.2
Q ss_pred cCceEEEEcCCCCEEEEe--------------CceEEEEcCC---CcEEEEeccC---cccccceeEEEEeCC-CC--cE
Q psy4832 180 LTPVALTSGPDGSLYVGD--------------FNLVRRLTPE---GNVFTVLQLS---ATQVSYQYYLALSPA-DG--HL 236 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d--------------~~~I~~i~~~---G~v~~~~~~~---~~~~~~p~~lav~p~-~g--~l 236 (770)
..|.+|+++++|.+|++. .++|.+++++ ++...+.-.+ .....+|.||.+.+. ++ .|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 468999999999999985 3579999876 4444322111 113358999999652 34 69
Q ss_pred EEEeCC--CcE--EEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-
Q psy4832 237 YISDAE--KHQ--ILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT- 311 (770)
Q Consensus 237 yvsd~~--~~~--I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~- 311 (770)
||++.. ..+ |+++ ++++...+.+.+-. ...++.|++++++++|.+||++..
T Consensus 130 ~Vvnh~~~~s~ielf~~-------d~~~~~~~~~~~~~-----------------g~~~~~pND~~v~~~G~fyvt~~~~ 185 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKF-------QEEEKSLLHLKTIR-----------------HKLLPSVNDIVAVGPEHFYATNDHY 185 (355)
T ss_dssp EEEECSTTCCEEEEEEE-------ETTTTEEEEEEEEC-----------------CTTCSSEEEEEEEETTEEEEEESCS
T ss_pred EEEECCCCCCeEEEEEE-------ECCCCEEEEEeccc-----------------cCCCCCCceEEEeCCCCEEecCCcE
Confidence 999887 344 4555 45555444443111 124789999999999999988641
Q ss_pred ------------------CeEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--
Q psy4832 312 ------------------NIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID-- 370 (770)
Q Consensus 312 ------------------~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D-- 370 (770)
.|.++++. .++.++ ..+..|+||+++| ++ .|||+|
T Consensus 186 ftd~~~~~~e~~~~~~~g~vyr~d~~-~~~~~~----------------------~~l~~pNGia~sp-Dg~~lYvadt~ 241 (355)
T 3sre_A 186 FIDPYLKSWEMHLGLAWSFVTYYSPN-DVRVVA----------------------EGFDFANGINISP-DGKYVYIAELL 241 (355)
T ss_dssp CSSHHHHHHHHHTTCCCEEEEEECTT-CCEEEE----------------------EEESSEEEEEECT-TSSEEEEEEGG
T ss_pred eCCcccccchhhccCCccEEEEEECC-eEEEee----------------------cCCcccCcceECC-CCCEEEEEeCC
Confidence 15555552 333222 3477899999999 66 799999
Q ss_pred CCEEEEEc--CCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcC-CCCEEEEeC-
Q psy4832 371 DRVIFKLT--NDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSP-TGDLYIADI- 446 (770)
Q Consensus 371 ~~~I~~i~--~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~- 446 (770)
.++|++++ .+|.+....- . ..-..|.||++|+ +|+||||..
T Consensus 242 ~~~I~~~~~~~~g~l~~~~~--~---------------------------------~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 242 AHKIHVYEKHANWTLTPLRV--L---------------------------------SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp GTEEEEEEECTTSCEEEEEE--E---------------------------------ECSSEEEEEEECTTTCCEEEEEES
T ss_pred CCeEEEEEECCCCcEecCEE--E---------------------------------eCCCCCceEEEeCCCCcEEEEecC
Confidence 48898887 4465432100 0 0013599999999 599999764
Q ss_pred CCCc
Q psy4832 447 DARK 450 (770)
Q Consensus 447 ~~~r 450 (770)
+..+
T Consensus 287 ~g~~ 290 (355)
T 3sre_A 287 NGMR 290 (355)
T ss_dssp CHHH
T ss_pred CceE
Confidence 4444
No 81
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.25 E-value=2e-09 Score=109.96 Aligned_cols=213 Identities=12% Similarity=0.176 Sum_probs=134.1
Q ss_pred cceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 222 SYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
..+.||+++|.++.||++.....+|+++ +++|.+....-.+ .+..|.||+++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~l-------d~~g~v~~~i~l~--------------------g~~D~EGIa~~~ 79 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEM-------TTNGDLIRTIPLD--------------------FVKDLETIEYIG 79 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEE-------ETTCCEEEEEECS--------------------SCSSEEEEEECS
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEE-------eCCCCEEEEEecC--------------------CCCChHHeEEeC
Confidence 4689999999788999866668999999 4556654332110 024689999999
Q ss_pred CCcEEEEeCCC--eE--EECCCCcEEE--eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--C-C
Q psy4832 302 DKTMFIADGTN--IR--VVSPEGIIHT--LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--D-R 372 (770)
Q Consensus 302 ~G~lYvaD~~~--Ir--~id~~G~i~t--~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~-~ 372 (770)
+|.+||++-.+ +. .++.++.+.. ........ ...=....|||+||.++.||++. . .
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~---------------~~~N~g~EGLA~d~~~~~L~va~E~~p~ 144 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQE---------------SPTNCGFEGLAYSRQDHTFWFFKEKNPI 144 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSS---------------CCCSSCCEEEEEETTTTEEEEEEESSSE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeecccccc---------------ccccCCcceEEEeCCCCEEEEEECcCCc
Confidence 99888987554 44 4566675332 22111000 00011258999999666899986 2 3
Q ss_pred EEEEEc--CCC-cEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcC-CCCEEEEeCCC
Q psy4832 373 VIFKLT--NDL-KVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSP-TGDLYIADIDA 448 (770)
Q Consensus 373 ~I~~i~--~~G-~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~ 448 (770)
.|+.++ ..+ .++++. ...+.....+..+.+|++|| .|.|||....+
T Consensus 145 ~i~~~~g~~~~~~l~i~~------------------------------~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s 194 (255)
T 3qqz_A 145 EVYKVNGLLSSNELHISK------------------------------DKALQRQFTLDDVSGAEFNQQKNTLLVLSHES 194 (255)
T ss_dssp EEEEEESTTCSSCCEEEE------------------------------CHHHHHTCCSSCCCEEEEETTTTEEEEEETTT
T ss_pred eEEEEcccccCCceeeec------------------------------chhhccccccCCceeEEEcCCCCeEEEEECCC
Confidence 677775 111 111110 00000111245689999998 68899999888
Q ss_pred CceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeee
Q psy4832 449 RKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 449 ~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~ 528 (770)
++ +-.+|.+|++..+.--. .+ .......+..|.|||+|++|+|||+.-.| .++++.
T Consensus 195 ~~---L~~~d~~g~~~~~~~L~-~g-------------------~~~l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~f~ 250 (255)
T 3qqz_A 195 RA---LQEVTLVGEVIGEMSLT-KG-------------------SRGLSHNIKQAEGVAMDASGNIYIVSEPN-RFYRFT 250 (255)
T ss_dssp TE---EEEECTTCCEEEEEECS-TT-------------------GGGCSSCCCSEEEEEECTTCCEEEEETTT-EEEEEE
T ss_pred Ce---EEEEcCCCCEEEEEEcC-Cc-------------------cCCcccccCCCCeeEECCCCCEEEEcCCc-eEEEEE
Confidence 74 77889999865543211 00 00112346789999999999999996665 888876
Q ss_pred cC
Q psy4832 529 HY 530 (770)
Q Consensus 529 ~~ 530 (770)
+.
T Consensus 251 ~~ 252 (255)
T 3qqz_A 251 PQ 252 (255)
T ss_dssp C-
T ss_pred ec
Confidence 53
No 82
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.20 E-value=1.1e-09 Score=122.10 Aligned_cols=278 Identities=16% Similarity=0.136 Sum_probs=147.4
Q ss_pred ccccCceEEEEcCCCC--EEEEeC-ceEEEEcCCCcEE--EEeccC---c-----ccccceeEEEEeCC---CCcEEEEe
Q psy4832 177 ARLLTPVALTSGPDGS--LYVGDF-NLVRRLTPEGNVF--TVLQLS---A-----TQVSYQYYLALSPA---DGHLYISD 240 (770)
Q Consensus 177 ~~l~~P~~la~~~dG~--lyv~d~-~~I~~i~~~G~v~--~~~~~~---~-----~~~~~p~~lav~p~---~g~lyvsd 240 (770)
..|..|++|++.|||+ |||++. ++|++++++|... .++.+. . .....+.+||++|. ++.|||+-
T Consensus 11 ~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 11 SGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp EEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred cCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 4588999999999996 999998 5999998887531 122211 1 11346789999984 58999985
Q ss_pred CCC------------cEEEEEeccCC---ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcE
Q psy4832 241 AEK------------HQILRVLSLES---VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTM 305 (770)
Q Consensus 241 ~~~------------~~I~~i~~~~~---~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~l 305 (770)
+.. .+|.|+..... ..++ ...+++..... ...-.+...|++++||.|
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~-~~~~~i~~~~~-----------------~~~~H~g~~l~fgpDG~L 152 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDL-RTARVFLEVAE-----------------LHRKHLGGQLLFGPDGFL 152 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCG-GGCEEEEEEEE-----------------SSSSSCEEEEEECTTSCE
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCC-CCceEEEEcCC-----------------CCCcccCCcEeECCCCcE
Confidence 421 47877765321 0111 12223322100 001234568999999999
Q ss_pred EEEeC--CC-----------------eEEECCCCcEEEeecCCCCCCCcC-----CCccCC--CcccccccccCcceEEE
Q psy4832 306 FIADG--TN-----------------IRVVSPEGIIHTLIGHHKHHNIWS-----PFNCHR--SFPASTAQLQWPTGLAL 359 (770)
Q Consensus 306 YvaD~--~~-----------------Ir~id~~G~i~t~~g~~~~~~~~~-----p~~~~~--~~~~~~~~l~~P~gla~ 359 (770)
||+-+ .+ |.+++++|.- ....|+ |+.... ....-...+++|.+|++
T Consensus 153 Yv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~--------~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~ 224 (463)
T 2wg3_C 153 YIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDM--------CNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAV 224 (463)
T ss_dssp EEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCC--------SSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEE
T ss_pred EEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCc--------ccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEE
Confidence 99832 21 5555555420 000011 111110 11234556889999999
Q ss_pred eCCC----C--eEEEEeCCEEEEEcCCCcEEEEe-cCCCCCCCCCCCCccccccccccccccccCCcccccccc-cCCee
Q psy4832 360 SPLD----D--SLHFIDDRVIFKLTNDLKVKIVA-GIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMD-LGSLT 431 (770)
Q Consensus 360 d~~~----g--~lyv~D~~~I~~i~~~G~v~~va-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-l~~P~ 431 (770)
+|.+ | .+|++|..-... ...++..+. |.. ... ..|.. ..... =..|.
T Consensus 225 dp~tg~~~G~l~~~~~D~~G~~~--~~~ei~~i~~G~~--yG~---~~P~~------------------~~~~~~g~Ap~ 279 (463)
T 2wg3_C 225 DRHPTDININLTILCSDSNGKNR--SSARILQIIKGKD--YES---EPSLL------------------EFKPFSNGPLV 279 (463)
T ss_dssp ESSCSSTTCSEEEEEECC--------CEEEEEEC------CCS---CCCCE------------------ECCC----CEE
T ss_pred CCCCCCcccceEEEecccCCCCC--CCCeEeeeccCCC--CCC---CCCeE------------------EeeCCCCcccc
Confidence 9943 4 567788410000 011222221 210 000 00100 00000 03688
Q ss_pred EEEEc-------CCCCEEEEeCCCCceeeEEEEcCCCc---EEEe-ecCccCCCCCcCCCCCcccccCccCcccccceec
Q psy4832 432 ALAFS-------PTGDLYIADIDARKVNALRVIDSTGR---MFDF-AGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARF 500 (770)
Q Consensus 432 giavd-------~~G~lyVaD~~~~ri~~i~~i~~~G~---i~~~-aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l 500 (770)
|++|- -.|.+|++|.. .+|.++. ++.++. ...+ .|.. ........
T Consensus 280 G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~-~~~~~~~~~~~~~~~g~~----------------------~~~~~~~~ 335 (463)
T 2wg3_C 280 GGFVYRGCQSERLYGSYVFGDRN-GNFLTLQ-QSPVTKQWQEKPLCLGTS----------------------GSCRGYFS 335 (463)
T ss_dssp EEEECCCSSCTTTTTCEEEEETT-SCEEEEE-C-----CCEEEEECEEET----------------------TSSCSCCC
T ss_pred ceEEEeCCCChhhcceEEEecCC-CcEEEEE-eCCCCceeeEEEeecCCc----------------------cccccccc
Confidence 99883 24679999997 5554442 222221 1111 1211 00001124
Q ss_pred CCeeEEEEcCCCcEEEEcC-------CCceEEeeec
Q psy4832 501 TSISALSVSPDGVVNVADQ-------GSLHILALQH 529 (770)
Q Consensus 501 ~~P~giav~~dG~lyvaD~-------~~~~I~~i~~ 529 (770)
.+|.+|+++|||.|||+|. .+++|+||..
T Consensus 336 ~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 336 GHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp SEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred CcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence 5799999999999999986 5789999974
No 83
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.19 E-value=7.7e-09 Score=106.21 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=132.6
Q ss_pred CceEEEEcCCCCEEEEeC----ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 181 TPVALTSGPDGSLYVGDF----NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~----~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
.|.+|+++++|.||++.. +.|+++|+ .|++...+..+ .-..+.+++++ ++.||+++..+++|.+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~--~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~---- 93 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD--DSYFGEGLTLL--NEKLYQVVWLKNIGFIYDR---- 93 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC--TTCCEEEEEEE--TTEEEEEETTCSEEEEEET----
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC--CCcceEEEEEe--CCEEEEEEecCCEEEEEEC----
Confidence 589999999999999964 59999996 48888765432 23455688887 6799999999999999953
Q ss_pred cCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCCC-cEEEeecCCCCCC
Q psy4832 256 ADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPEG-IIHTLIGHHKHHN 333 (770)
Q Consensus 256 ~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~G-~i~t~~g~~~~~~ 333 (770)
.+..+..-+..+. ..+.+|+.| .+.||+++..+ |.++|+.. ++..-+..+..
T Consensus 94 --~t~~v~~~i~~g~---------------------~~g~glt~D-g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-- 147 (266)
T 2iwa_A 94 --RTLSNIKNFTHQM---------------------KDGWGLATD-GKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-- 147 (266)
T ss_dssp --TTTEEEEEEECCS---------------------SSCCEEEEC-SSSEEEECSSSEEEEECTTTCCEEEEEECEET--
T ss_pred --CCCcEEEEEECCC---------------------CCeEEEEEC-CCEEEEECCCCeEEEEECCCCcEEEEEEECCC--
Confidence 1232221111100 023345543 34699999766 99999764 44433322211
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCC-CCCCCCCCCCccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIP-LHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~-~~~~~~~~~~~~~~~~~~~ 409 (770)
...+..|++|.+. +|.||+.. .+.|.+||+ +|++....-.+ ....
T Consensus 148 --------------~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~--------------- 196 (266)
T 2iwa_A 148 --------------GHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK--------------- 196 (266)
T ss_dssp --------------TEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH---------------
T ss_pred --------------CcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc---------------
Confidence 0124568899988 78999988 689999996 57765333111 0000
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEc
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVID 458 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~ 458 (770)
...........|+|||++++|+ |||+.....++..|+...
T Consensus 197 ---------~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 197 ---------LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp ---------HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred ---------cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 0000011235699999999875 999999888776665544
No 84
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.18 E-value=8.4e-10 Score=115.65 Aligned_cols=222 Identities=13% Similarity=0.048 Sum_probs=133.6
Q ss_pred cccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCC-CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEE
Q psy4832 220 QVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPS-INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLA 298 (770)
Q Consensus 220 ~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~-g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIa 298 (770)
.-.+|.++++++.++.+|+++..+++|.++ +++ +..+.+. .... .+.|++ ...|.||.
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~-------~~~~~~~~~~~-~~~~------s~~g~~-------~~~~sGl~ 69 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVY-------NPKTQSHFNVV-IDGA------SSNGDG-------EQQMSGLS 69 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEE-------CTTTCCEEEEC-CTTT------CCSSCC-------SEEEEEEE
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEE-------cCCCCeEEEEe-cCCc------cccCCC-------cceeeEEE
Confidence 346899999998899999999999999999 565 3333331 1000 000111 23568999
Q ss_pred E---ccCCcEEE-EeC-------------CC-eEEECCC----CcEEEeecCCCCCCCcCCCccCCCcccccccccCcce
Q psy4832 299 I---KADKTMFI-ADG-------------TN-IRVVSPE----GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTG 356 (770)
Q Consensus 299 v---d~~G~lYv-aD~-------------~~-Ir~id~~----G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~g 356 (770)
+ |++|.|+| ++. .+ +.++|.+ |+....+.-.... ..........+..|.+
T Consensus 70 ~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~--------~~~~~~~g~~~~~~nD 141 (334)
T 2p9w_A 70 LLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ--------DEFEKKAGKRPFGVVQ 141 (334)
T ss_dssp ESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH--------HHHHHHHSSCCEEEEE
T ss_pred EeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccc--------ccccccccccccCCce
Confidence 9 78999998 552 23 7788866 5544433211000 0000000012345889
Q ss_pred EEEeCCCCeEEEEe--C-CEEEEEcCCCc-EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeE
Q psy4832 357 LALSPLDDSLHFID--D-RVIFKLTNDLK-VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTA 432 (770)
Q Consensus 357 la~d~~~g~lyv~D--~-~~I~~i~~~G~-v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~g 432 (770)
|++|+ +|++||+| . +.|+|++++|+ +..+.-... .......++|
T Consensus 142 vavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~-------------------------------~~~~~~G~nG 189 (334)
T 2p9w_A 142 SAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESG-------------------------------NGGQRPGYSG 189 (334)
T ss_dssp EEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCC-------------------------------CSSSCCSCSE
T ss_pred eEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCC-------------------------------CcccccCcce
Confidence 99999 99999999 6 88999999997 333321110 0011345899
Q ss_pred EEEcCCCC-EEEEeCCCCceeeEEEEcCCCcEE-EeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEE-EEc
Q psy4832 433 LAFSPTGD-LYIADIDARKVNALRVIDSTGRMF-DFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISAL-SVS 509 (770)
Q Consensus 433 iavd~~G~-lyVaD~~~~ri~~i~~i~~~G~i~-~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gi-av~ 509 (770)
|++.|+|+ |++++. .++ +.++|..-.+. .+.-. .. .....|..|.+| ++.
T Consensus 190 Iv~~pdg~~Liv~~~-~g~---L~~fD~~~pv~~~v~~~--------------------~~---G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGG-PRA---LTAFDVSKPYAWPEPVK--------------------IN---GDFGTLSGTEKIVTVP 242 (334)
T ss_dssp EEEETTTTEEEEESS-SSS---EEEEECSSSSCCCEECE--------------------ES---SCCCCCTTEEEEEEEE
T ss_pred EEEeCCCCEEEEEcC-CCe---EEEEcCCCCcceeeccc--------------------cc---CCcccccCcccccccc
Confidence 99999997 777777 765 55666441110 01000 00 011346789995 666
Q ss_pred CCCcE-EEEcCCCceEEeeec
Q psy4832 510 PDGVV-NVADQGSLHILALQH 529 (770)
Q Consensus 510 ~dG~l-yvaD~~~~~I~~i~~ 529 (770)
.+|++ +|++..++++...+.
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECS
T ss_pred cCCEEEEEEcCCCCEEEEECC
Confidence 68877 899887766544433
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.16 E-value=3.6e-08 Score=104.38 Aligned_cols=240 Identities=14% Similarity=0.117 Sum_probs=142.6
Q ss_pred cCceEEEEcCCCC-EEEEeC--ceEEEEcC---CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccC
Q psy4832 180 LTPVALTSGPDGS-LYVGDF--NLVRRLTP---EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLE 253 (770)
Q Consensus 180 ~~P~~la~~~dG~-lyv~d~--~~I~~i~~---~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~ 253 (770)
..|.+++++|+|. ||++.. +.|+.++. +|+...+...... ..|..++++|.+..||++....+.|..++.
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~-- 113 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP--GSLTHISTDHQGQFVFVGSYNAGNVSVTRL-- 113 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS--SCCSEEEECTTSSEEEEEETTTTEEEEEEE--
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC--CCCcEEEEcCCCCEEEEEecCCCeEEEEEC--
Confidence 3688999999998 888887 56766543 3555433222121 278999999855569999988888887743
Q ss_pred CccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEe-CCC-eEEEC--CCCcEEEee--
Q psy4832 254 SVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIAD-GTN-IRVVS--PEGIIHTLI-- 326 (770)
Q Consensus 254 ~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD-~~~-Ir~id--~~G~i~t~~-- 326 (770)
+ ++........ ......|.+++++++|. ||+++ ... |+.++ .+|.+..+.
T Consensus 114 ---~-~~~~~~~~~~-------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 114 ---E-DGLPVGVVDV-------------------VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp ---E-TTEEEEEEEE-------------------ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred ---C-CCcccccccc-------------------ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 1 2221111100 00112488999999986 88887 333 66655 446654322
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcCC---CcEEE---EecCCCCCCCCC
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTND---LKVKI---VAGIPLHCRTGD 397 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~~---G~v~~---vaG~~~~~~~~~ 397 (770)
.... ..-..|.+++++| ++. ||+++ ++.|..++.+ |++.. +...+..
T Consensus 171 ~~~~------------------~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~----- 226 (343)
T 1ri6_A 171 EVTT------------------VEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN----- 226 (343)
T ss_dssp EEEC------------------STTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT-----
T ss_pred cccc------------------CCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc-----
Confidence 0000 0012578999999 775 88887 4677777743 43321 1111100
Q ss_pred CCCccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC---CCcEEEeecCccCC
Q psy4832 398 KDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS---TGRMFDFAGRWQSD 473 (770)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~---~G~i~~~aG~~~~~ 473 (770)
......|.+|+++|+|. ||++....+.| ..++. .+....+.-..
T Consensus 227 --------------------------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i---~v~d~~~~~~~~~~~~~~~--- 274 (343)
T 1ri6_A 227 --------------------------FSDTRWAADIHITPDGRHLYACDRTASLI---TVFSVSEDGSVLSKEGFQP--- 274 (343)
T ss_dssp --------------------------CCSCCCEEEEEECTTSSEEEEEETTTTEE---EEEEECTTSCCEEEEEEEE---
T ss_pred --------------------------ccccCCccceEECCCCCEEEEEecCCCEE---EEEEEcCCCCceEEeeeec---
Confidence 01124588999999986 88888776654 44332 23333332100
Q ss_pred CCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEee
Q psy4832 474 KKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILAL 527 (770)
Q Consensus 474 ~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i 527 (770)
.-..|.+++++|+|. ||++...++.|..+
T Consensus 275 -------------------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 275 -------------------------TETQPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp -------------------------CSSSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred -------------------------CCCccceEEECCCCCEEEEecCCCCeEEEE
Confidence 011378899999996 78888666665443
No 86
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.16 E-value=2e-09 Score=120.21 Aligned_cols=174 Identities=16% Similarity=0.221 Sum_probs=102.5
Q ss_pred CCCcccee-eeeecCCCeEEECCCccEEecccCCCeEEEEec-cCccCCccCCCCCcccccccccCceEEEEcC----CC
Q psy4832 118 GGWSLDVH-HHYNFHEGILQKGDGSSLHLKHEFPRTVSVVMG-TGLQRPLVCKDCDGVARDARLLTPVALTSGP----DG 191 (770)
Q Consensus 118 ggw~l~~~-~~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g-~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~----dG 191 (770)
.+|.+..- .-|+.|.++....|| .+|+++.....|..+.. +|....+.. .............+.+|+++| +|
T Consensus 15 ~gf~~~~~a~~l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~-~~~~~~~~~g~~Gllgia~~Pdf~~~g 92 (454)
T 1cru_A 15 ENFDKKVILSNLNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQ-VPEIVNDADGQNGLLGFAFHPDFKNNP 92 (454)
T ss_dssp TTSCEEEEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEE-CTTCCCCTTSSCSEEEEEECTTTTTSC
T ss_pred CCeEEEEEECCCCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEec-CCccccccCCCCceeEEEECCCcCcCC
Confidence 34544322 237788899999999 48888833346877754 344322110 000000011234577999999 78
Q ss_pred CEEEEeC--------------ceEEEEcCC---CcE---EEEec-cCcccccceeEEEEeCCCCcEEEEeCC--------
Q psy4832 192 SLYVGDF--------------NLVRRLTPE---GNV---FTVLQ-LSATQVSYQYYLALSPADGHLYISDAE-------- 242 (770)
Q Consensus 192 ~lyv~d~--------------~~I~~i~~~---G~v---~~~~~-~~~~~~~~p~~lav~p~~g~lyvsd~~-------- 242 (770)
.|||++. ++|.|++.+ +++ ..++. .+......+.+|+++| +|.|||+...
T Consensus 93 ~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~ 171 (454)
T 1cru_A 93 YIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAY 171 (454)
T ss_dssp EEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGG
T ss_pred EEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccc
Confidence 9999974 478888643 222 23332 3333456789999997 8999998432
Q ss_pred ------------------------CcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCC-CcccccccccCcceE
Q psy4832 243 ------------------------KHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGD-NGPALAAKLSHPKGL 297 (770)
Q Consensus 243 ------------------------~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~-~g~~~~a~l~~P~gI 297 (770)
.++|+||+ ++|.+ |.++.+.+. .......-+.+|.||
T Consensus 172 ~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~-------~dG~i-----------p~~Npf~~~~~~ei~a~G~RNp~gl 233 (454)
T 1cru_A 172 LFLPNQAQHTPTQQELNGKDYHTYMGKVLRLN-------LDGSI-----------PKDNPSFNGVVSHIYTLGHRNPQGL 233 (454)
T ss_dssp TTSCCCTTCCCCHHHHHTTCCTTCSSEEEEEC-------TTSCC-----------CTTCCEETTEECSEEEBCCSEEEEE
T ss_pred cccccccccccccccccccCCCCCCeeEEEEe-------CCCCC-----------CCCCCCCCCCcceEEEECCCCcceE
Confidence 35788884 44421 000000000 001122336689999
Q ss_pred EEccCCcEEEEeCCC
Q psy4832 298 AIKADKTMFIADGTN 312 (770)
Q Consensus 298 avd~~G~lYvaD~~~ 312 (770)
++|++|.||++|.+.
T Consensus 234 a~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 234 AFTPNGKLLQSEQGP 248 (454)
T ss_dssp EECTTSCEEEEEECS
T ss_pred EECCCCCEEEEecCC
Confidence 999999999999653
No 87
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.16 E-value=3e-05 Score=88.59 Aligned_cols=446 Identities=16% Similarity=0.227 Sum_probs=220.0
Q ss_pred ceEEEEcCCCCEEEE-eC-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCC
Q psy4832 182 PVALTSGPDGSLYVG-DF-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPS 259 (770)
Q Consensus 182 P~~la~~~dG~lyv~-d~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~ 259 (770)
-.+|++.|||.++++ .. +.|+.++.+|+....+.. .-.....|+++| ++.+.++-..++.|+.++ .+
T Consensus 19 V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~g---h~~~V~~l~fsp-dg~~las~~~d~~i~vWd-------~~ 87 (577)
T 2ymu_A 19 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG---HSSSVWGVAFSP-DGQTIASASDDKTVKLWN-------RN 87 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEEC---CSSCEEEEEECT-TSSEEEEEETTSCEEEEE-------TT
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeC---CCCCEEEEEECC-CCCEEEEEeCCCEEEEEE-------CC
Confidence 468999999986654 33 478888999987766532 223457899998 777777666667777773 34
Q ss_pred CcEEE-EECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CC-eEEECCCCcEE-EeecCCCCC--C
Q psy4832 260 INWEV-AVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TN-IRVVSPEGIIH-TLIGHHKHH--N 333 (770)
Q Consensus 260 g~~~~-vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~-Ir~id~~G~i~-t~~g~~~~~--~ 333 (770)
+.... +.+. -.....|++.++|...++-. .. ++..+..+... ...+..... .
T Consensus 88 ~~~~~~~~~~----------------------~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 88 GQLLQTLTGH----------------------SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 145 (577)
T ss_dssp SCEEEEECCC----------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEEECC----------------------CCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence 43322 2110 11345788888877554432 22 55444333221 111111000 0
Q ss_pred CcCCC------ccCCC-----------cccccccccCcceEEEeCCCCeEEEE-e-CCEEEEEcCCCcEE-EEecCCCCC
Q psy4832 334 IWSPF------NCHRS-----------FPASTAQLQWPTGLALSPLDDSLHFI-D-DRVIFKLTNDLKVK-IVAGIPLHC 393 (770)
Q Consensus 334 ~~~p~------~~~~~-----------~~~~~~~l~~P~gla~d~~~g~lyv~-D-~~~I~~i~~~G~v~-~vaG~~~~~ 393 (770)
.+.|. .+... .............+++.| ++.+.++ . ++.|+..+.+++.. .+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~---- 220 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGH---- 220 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECTTSCEEEEEECC----
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecC-CCCEEEEEcCCCEEEEEeCCCcEEEEEecC----
Confidence 00000 00000 000001112234566666 5553333 2 45566555555432 22210
Q ss_pred CCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEe-ecCccC
Q psy4832 394 RTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDF-AGRWQS 472 (770)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~-aG~~~~ 472 (770)
-....+++++|+|.++++-...+. |+..+.+++.... .+.
T Consensus 221 ---------------------------------~~~v~~~~~s~dg~~l~~~~~d~~---i~~w~~~~~~~~~~~~~--- 261 (577)
T 2ymu_A 221 ---------------------------------SSSVRGVAFSPDGQTIASASDDKT---VKLWNRNGQLLQTLTGH--- 261 (577)
T ss_dssp ---------------------------------SSCEEEEEECTTSSCEEEEETTSC---EEEECTTSCEEEEECCC---
T ss_pred ---------------------------------CCCEEEEEECCCCCEEEEEeCCCE---EEEEeCCCCEEEEEecC---
Confidence 123688999999885555444443 6666766664332 211
Q ss_pred CCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecCCc-----------c----cCCC
Q psy4832 473 DKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILALQHYLP-----------T----HDEH 537 (770)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~~~-----------~----~~~~ 537 (770)
-..+.++++.|+|..+++-..++.|+....... . ....
T Consensus 262 ---------------------------~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~ 314 (577)
T 2ymu_A 262 ---------------------------SSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD 314 (577)
T ss_dssp ---------------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT
T ss_pred ---------------------------CCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCC
Confidence 123556777777766554333333333222110 0 1112
Q ss_pred CcEEEeCCCCCcEEEEecCCceEEEEcCCCCCcEEEEEecCCCCCCceEEEECCCCCEEEEEEcCCCcce-E--------
Q psy4832 538 GEFKIPYPATNEIYVFNRYGQHITTRDMTSGKPRYSFLYSKNTSFGKLSTITDASGNKINFLRDYSNVAQ-L-------- 608 (770)
Q Consensus 538 g~~~i~~~~~~e~yvfd~~G~~~~t~d~~tg~~~y~~~Yd~~~~~G~L~~vtd~~G~~~~~~~d~~~~~~-~-------- 608 (770)
+.+-+.....+.+.++|..++.+.+..... .......+..+ |++......+|.. ++..-..++.. +
T Consensus 315 ~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~-~~v~~~~~s~~---g~~l~~~~~dg~v-~~~~~~~~~~~~~~~~~~~v~ 389 (577)
T 2ymu_A 315 GQTIASASDDKTVKLWNRNGQHLQTLTGHS-SSVWGVAFSPD---GQTIASASDDKTV-KLWNRNGQLLQTLTGHSSSVR 389 (577)
T ss_dssp SSEEEEEETTSCEEEEETTSCEEEEECCCS-SCEEEEEECTT---SSEEEEEETTSEE-EEEETTCCEEEEEECCSSCEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEeCCC-CCEEEEEECCC---CCEEEEEeCCCEE-EEEcCCCCEEEEecCCCCCeE
Confidence 233333334556777888777776665443 33455566665 6665555455543 33222222211 1
Q ss_pred ---eccCCcc--ccCCCCcceeecceeeeeecCceEEEEEec-CCceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCe
Q psy4832 609 ---QWPTGLA--LSPLDDSLHFIDDRVIFKLTNDLKIRALKK-GRFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPT 682 (770)
Q Consensus 609 ---~~p~G~~--~~~~d~~~~~~~~~~~~~~~~g~l~~~~~~-~g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~ 682 (770)
..|+|.. ....|+... +-...+++++.... .+....-.+.+.+++++.-..+|.+ ..|+-.. .
T Consensus 390 ~~~~s~dg~~l~~~~~d~~v~-------~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v--~~w~~~~--~ 458 (577)
T 2ymu_A 390 GVAFSPDGQTIASASDDKTVK-------LWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV--KLWNRNG--Q 458 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEE-------EECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE--EEEETTS--C
T ss_pred EEEECCCCCEEEEEeCCCEEE-------EEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE--EEEECCC--C
Confidence 2233321 111111111 11235555554443 3444456677777777766667743 3343222 1
Q ss_pred eEEEEEeCCCCeEEEEEEccCCcEeEEEecCcEEEEEeCCCCCeEEEEcCCCCEEEEEEeCCCCceE
Q psy4832 683 QVTHIYSPRYGKLISLVYDERGFLIFAQMFRHKYYIATDQCGTPVMVFNQYGETVREIMRSPYGHIV 749 (770)
Q Consensus 683 ~~~~~~~p~~g~~~~~~yd~~G~l~~~~~~~~~~~~~~d~~G~~~~~~d~~G~~v~~~~yd~~G~~~ 749 (770)
.+..+... .+....+.+.+.|++++....+.+.+ ..|..|.++.........|..+...|.|+.+
T Consensus 459 ~~~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~-iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 459 LLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVK-LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp EEEEEECC-SSCEEEEEECTTSCEEEEEETTSEEE-EEETTSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEE-EEcCCCCEEEEEeCCCCCEEEEEEcCCCCEE
Confidence 23333333 56677777777777776654443332 2345666666555544445566666666644
No 88
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.15 E-value=1.9e-09 Score=112.91 Aligned_cols=210 Identities=10% Similarity=-0.009 Sum_probs=137.0
Q ss_pred cCCCeEEECCCccEEecccCCCeEEEEeccCc-cCCccCCCCCccc-ccccccCceEEEE---cCCCCEEE-Ee------
Q psy4832 130 FHEGILQKGDGSSLHLKHEFPRTVSVVMGTGL-QRPLVCKDCDGVA-RDARLLTPVALTS---GPDGSLYV-GD------ 197 (770)
Q Consensus 130 ~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~-~~~~~~~~~~g~~-~~~~l~~P~~la~---~~dG~lyv-~d------ 197 (770)
.|+|+.++.....+|+++...+.|.++...+. ...+. ..+.. .......|.+|.+ |++|.||| ++
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~---~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV---IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC---CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe---cCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 69999998877789999988899999977633 21110 11110 0223456799999 79999998 56
Q ss_pred --------CceEEEEcCC----CcEEEEeccCc---c-------cccceeEEEEeCCCCcEEEEeCCC-cEEEEEeccCC
Q psy4832 198 --------FNLVRRLTPE----GNVFTVLQLSA---T-------QVSYQYYLALSPADGHLYISDAEK-HQILRVLSLES 254 (770)
Q Consensus 198 --------~~~I~~i~~~----G~v~~~~~~~~---~-------~~~~p~~lav~p~~g~lyvsd~~~-~~I~~i~~~~~ 254 (770)
.+.|.+++.+ |+....+.+.. . ....+++|++|+ +|++||+++.. ..|+|+
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV----- 164 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARV----- 164 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEE-----
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEE-----
Confidence 2579999977 87776665421 1 345689999996 99999999998 999999
Q ss_pred ccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEECCCCcEEEeecCCCC
Q psy4832 255 VADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVVSPEGIIHTLIGHHKH 331 (770)
Q Consensus 255 ~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~id~~G~i~t~~g~~~~ 331 (770)
+++|. +..+.-. . | .......|.||+++++|+ |+++++.. |.++|..-.+...++...
T Consensus 165 --~pdG~~~~~~~~~-~---~------------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~- 225 (334)
T 2p9w_A 165 --SADGKTVSTFAWE-S---G------------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKI- 225 (334)
T ss_dssp --CTTSCCEEEEEEC-C---C------------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEE-
T ss_pred --eCCCCEEeeeeec-C---C------------CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccc-
Confidence 67876 3322211 0 0 011234688999999996 77777744 999986621110010000
Q ss_pred CCCcCCCccCCCcccccccccCcceE-EEeCCCCeE-EEEe--CCEEEEEcCCC
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGL-ALSPLDDSL-HFID--DRVIFKLTNDL 381 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gl-a~d~~~g~l-yv~D--~~~I~~i~~~G 381 (770)
......|..|.+| ++.. +|++ +|++ ++.+...+.||
T Consensus 226 -------------~G~~~~~~~~dgilp~~~-~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 226 -------------NGDFGTLSGTEKIVTVPV-GNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp -------------SSCCCCCTTEEEEEEEEE-TTEEEEEEEETTEEEEEECSST
T ss_pred -------------cCCcccccCccccccccc-CCEEEEEEcCCCCEEEEECCCC
Confidence 0001246778895 6655 7775 8888 45666666665
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.08 E-value=1.2e-07 Score=101.96 Aligned_cols=234 Identities=14% Similarity=0.127 Sum_probs=126.7
Q ss_pred eEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC---CcEEEEEeccCCccCCC-CcEEEEECCCccccC
Q psy4832 200 LVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE---KHQILRVLSLESVADPS-INWEVAVGSGERCIP 274 (770)
Q Consensus 200 ~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~---~~~I~~i~~~~~~~~~~-g~~~~vaG~g~~~~p 274 (770)
.+.++++ +|+...+... ....|.+|+++|.+..||+++.. ++.|..+.. +.+ |.+..+.....
T Consensus 30 ~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~-----~~~~g~~~~~~~~~~---- 97 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAF-----DKEKGTLHLLNTQKT---- 97 (361)
T ss_dssp EEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEE-----ETTTTEEEEEEEEEC----
T ss_pred EEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEE-----eCCCCcEEEeeEecc----
Confidence 3556664 4666544321 45679999999855569999873 456644322 333 55544331100
Q ss_pred CCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC--eEEEC--CCCcEEEeecCCCCCCCcCCCccCCCccccccc
Q psy4832 275 GDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN--IRVVS--PEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQ 350 (770)
Q Consensus 275 ~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~--Ir~id--~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~ 350 (770)
.-..|..+++ ....||+++... |..++ .+|.+..+...-... +.+.......
T Consensus 98 ---------------~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~--------g~~~~~~~~~ 153 (361)
T 3scy_A 98 ---------------MGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK--------GSGPDKERQT 153 (361)
T ss_dssp ---------------SSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC--------CCCSCTTTCS
T ss_pred ---------------CCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc--------CCCCCccccC
Confidence 0125888998 344599987543 55544 455433221100000 0000001112
Q ss_pred ccCcceEEEeCCCCe-EEEEe--CCEEEEE--cCCC-----c-EEEEecCCCCCCCCCCCCccccccccccccccccCCc
Q psy4832 351 LQWPTGLALSPLDDS-LHFID--DRVIFKL--TNDL-----K-VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDS 419 (770)
Q Consensus 351 l~~P~gla~d~~~g~-lyv~D--~~~I~~i--~~~G-----~-v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (770)
...|.+++++| +|+ ||+++ .+.|..+ +.++ + +.........
T Consensus 154 ~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~--------------------------- 205 (361)
T 3scy_A 154 MPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF--------------------------- 205 (361)
T ss_dssp SCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE---------------------------
T ss_pred CCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce---------------------------
Confidence 34578999999 776 99998 4566555 4333 1 2211000000
Q ss_pred ccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccc
Q psy4832 420 VRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTST 497 (770)
Q Consensus 420 ~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 497 (770)
....-..|.+++++|+|. ||+++..+++| +.++. +|.+..+.... ...
T Consensus 206 ---~~~~~~~~~~~~~spdg~~l~v~~~~~~~v---~v~~~~~g~~~~~~~~~------------------------~~~ 255 (361)
T 3scy_A 206 ---KVAPGSGPRHLIFNSDGKFAYLINEIGGTV---IAFRYADGMLDEIQTVA------------------------ADT 255 (361)
T ss_dssp ---ECCTTCCEEEEEECTTSSEEEEEETTTCEE---EEEEEETTEEEEEEEEE------------------------SCS
T ss_pred ---ecCCCCCCeEEEEcCCCCEEEEEcCCCCeE---EEEEecCCceEEeEEEe------------------------cCC
Confidence 000123589999999997 99999776654 44442 56554332111 001
Q ss_pred eecCCeeEEEEcCCCc-EEEEcCC-CceEEee
Q psy4832 498 ARFTSISALSVSPDGV-VNVADQG-SLHILAL 527 (770)
Q Consensus 498 ~~l~~P~giav~~dG~-lyvaD~~-~~~I~~i 527 (770)
..+..|.+|+++|||. ||+++.. .+.|..+
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 1235688999999996 7888877 6665543
No 90
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.07 E-value=9.5e-09 Score=111.32 Aligned_cols=255 Identities=11% Similarity=0.004 Sum_probs=141.5
Q ss_pred ccCceEEEEcCCCC-EEEEeCceEEEEcC--CCcEEEEeccCcccccceeEEEEeCCCCc---EEEEe------C-----
Q psy4832 179 LLTPVALTSGPDGS-LYVGDFNLVRRLTP--EGNVFTVLQLSATQVSYQYYLALSPADGH---LYISD------A----- 241 (770)
Q Consensus 179 l~~P~~la~~~dG~-lyv~d~~~I~~i~~--~G~v~~~~~~~~~~~~~p~~lav~p~~g~---lyvsd------~----- 241 (770)
...|..++++|+|. ||+++...|..++. +|+...+...... ..|.+++++| +|. +|+++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~--g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIG--GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECC--SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecC--CCCccEEECC-CCCEEEEEEecCCcceeccceee
Confidence 34689999999998 88887766666653 6776544322111 1377899998 665 33443 1
Q ss_pred -CCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEEC
Q psy4832 242 -EKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVS 317 (770)
Q Consensus 242 -~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id 317 (770)
..+.+..++. +.+|.+......-. ......|.+++++++|. ||++|... |+.++
T Consensus 116 ~~~g~v~v~~~-----~~~g~~~~~~~~~~-----------------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 116 KFAGYGNVFSV-----SETGKLEKNVQNYE-----------------YQENTGIHGMVFDPTETYLYSADLTANKLWTHR 173 (365)
T ss_dssp SSCCEEEEEEE-----CTTCCEEEEEEEEE-----------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCceEEEEcc-----CCCCcCcceEeeEE-----------------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 2344444422 23444322111000 00123689999999997 88888643 77766
Q ss_pred C--CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEE--cC-CCcEEE----
Q psy4832 318 P--EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKL--TN-DLKVKI---- 385 (770)
Q Consensus 318 ~--~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i--~~-~G~v~~---- 385 (770)
. +|++..+..... ...-..|.+++++| +| .||+++ ++.|..+ +. +|++..
T Consensus 174 ~~~~g~~~~~~~~~~-----------------~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 174 KLASGEVELVGSVDA-----------------PDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp ECTTSCEEEEEEEEC-----------------SSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred ECCCCCEEEeeeEec-----------------CCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccce
Confidence 4 466543221000 00013589999999 77 588887 4666554 43 466432
Q ss_pred EecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEE-EcCCCC-EEEEeCCCC-----ceeeEEEEc
Q psy4832 386 VAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALA-FSPTGD-LYIADIDAR-----KVNALRVID 458 (770)
Q Consensus 386 vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~gia-vd~~G~-lyVaD~~~~-----ri~~i~~i~ 458 (770)
+...+... .+.. .. . .....|.+++ ++|+|+ ||+++...+ +| ++..++
T Consensus 236 ~~~~~~~~----~g~~------------------~~-~-~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i-~v~~~~ 290 (365)
T 1jof_A 236 FPLIPPGI----PDRD------------------PE-T-GKGLYRADVCALTFSGKYMFASSRANKFELQGYI-AGFKLR 290 (365)
T ss_dssp EESSCTTC----CCBC------------------TT-T-SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEE-EEEEEC
T ss_pred EEcCCCCc----CCcc------------------cc-c-ccccccccEEEECCCCCEEEEECCCCCCCCCCeE-EEEEEC
Confidence 22111100 0000 00 0 0122589999 999997 899887554 44 334444
Q ss_pred CCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcC---CC-cEEEEcCCCceEEee
Q psy4832 459 STGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSP---DG-VVNVADQGSLHILAL 527 (770)
Q Consensus 459 ~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~---dG-~lyvaD~~~~~I~~i 527 (770)
.+|++..+..... ..-..|.+++++| || .||+++..++.|..+
T Consensus 291 ~~g~~~~~~~~~~--------------------------~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 291 DCGSIEKQLFLSP--------------------------TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp TTSCEEEEEEEEE--------------------------CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred CCCCEEEeeeeee--------------------------cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 5677654321000 0012367889999 67 578888766666544
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.05 E-value=5.6e-07 Score=97.52 Aligned_cols=224 Identities=20% Similarity=0.319 Sum_probs=145.9
Q ss_pred CceEEEEcCCCC-EEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 181 TPVALTSGPDGS-LYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
.|.++++.|+|. ||++.. +.|+.++. +|+....+... ..+..++++|.+..||++....+.|+.++..
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~----~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~---- 104 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG----SSPQGVAVSPDGKQVYVTNMASSTLSVIDTT---- 104 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEETTTTEEEEEETT----
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC----CCccceEECCCCCEEEEEECCCCEEEEEECC----
Confidence 478999999997 667763 58999986 57766655422 2789999998666799999888899988532
Q ss_pred CCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECC-CCcEEEeecCCCCC
Q psy4832 257 DPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSP-EGIIHTLIGHHKHH 332 (770)
Q Consensus 257 ~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~-~G~i~t~~g~~~~~ 332 (770)
++........ -..|.+++++++|. ||++.... |+.+|. .++.......+
T Consensus 105 --~~~~~~~~~~----------------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--- 157 (391)
T 1l0q_A 105 --SNTVAGTVKT----------------------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--- 157 (391)
T ss_dssp --TTEEEEEEEC----------------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC---
T ss_pred --CCeEEEEEeC----------------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC---
Confidence 2333222211 11467999999887 77776644 888885 45544433221
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
..|.+++++| ++ .||++. ++.|+.++.. ++.......
T Consensus 158 -------------------~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------------------- 198 (391)
T 1l0q_A 158 -------------------RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKV------------------- 198 (391)
T ss_dssp -------------------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-------------------
T ss_pred -------------------CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEec-------------------
Confidence 2467899999 66 577876 5788888854 443322210
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeC--CCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcc
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADI--DARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAE 484 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~--~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~ 484 (770)
-..|.+++++++|. ||++.. .++ .|+.++. +++.......
T Consensus 199 ------------------~~~~~~~~~~~~g~~l~~~~~~~~~~---~v~~~d~~~~~~~~~~~~--------------- 242 (391)
T 1l0q_A 199 ------------------EAAPSGIAVNPEGTKAYVTNVDKYFN---TVSMIDTGTNKITARIPV--------------- 242 (391)
T ss_dssp ------------------SSEEEEEEECTTSSEEEEEEECSSCC---EEEEEETTTTEEEEEEEC---------------
T ss_pred ------------------CCCccceEECCCCCEEEEEecCcCCC---cEEEEECCCCeEEEEEec---------------
Confidence 12478999999987 777764 333 3667775 3443222110
Q ss_pred cccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEeeec
Q psy4832 485 FEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILALQH 529 (770)
Q Consensus 485 ~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i~~ 529 (770)
-..|.+++++|+|. ||++...+++|+.+..
T Consensus 243 ---------------~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 243 ---------------GPDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ---------------CSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ---------------CCCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 12478899999995 6788766666665543
No 92
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.01 E-value=4.2e-07 Score=99.99 Aligned_cols=272 Identities=15% Similarity=0.170 Sum_probs=164.5
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccC--cccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLS--ATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~--~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
.|.++++.|++.++++.. +.|+.++.+ |+....+... .........++++| ++.+|++....+.|+.++.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~---- 198 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDL---- 198 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEET----
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEEC----
Confidence 366788999888888875 469999865 6666544211 12233567899986 8999999998889988853
Q ss_pred cCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC-C-eEEECC-CCcEEEeecCCC
Q psy4832 256 ADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT-N-IRVVSP-EGIIHTLIGHHK 330 (770)
Q Consensus 256 ~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~-~-Ir~id~-~G~i~t~~g~~~ 330 (770)
.++.. ..+.+. -..|.+++++++|. ||++... + |+.+|. .+.....+...
T Consensus 199 --~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~- 253 (433)
T 3bws_A 199 --KTLAYKATVDLT----------------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI- 253 (433)
T ss_dssp --TTCCEEEEEECS----------------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-
T ss_pred --CCceEEEEEcCC----------------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-
Confidence 12222 222211 12578999999886 7777743 3 888885 45443332111
Q ss_pred CCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe---------CCEEEEEcC-CCcEEEEecCCCCCCCCCCC
Q psy4832 331 HHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID---------DRVIFKLTN-DLKVKIVAGIPLHCRTGDKD 399 (770)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D---------~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~ 399 (770)
..|.+++++| ++ .|+++. ++.|+.++. ++++......
T Consensus 254 ---------------------~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---------- 301 (433)
T 3bws_A 254 ---------------------GLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---------- 301 (433)
T ss_dssp ---------------------SEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE----------
T ss_pred ---------------------CCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC----------
Confidence 1378999999 66 577766 246777774 3443322210
Q ss_pred CccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCc
Q psy4832 400 KRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNC 477 (770)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~ 477 (770)
-..|.+++++|+|. ||++....++ |+.++. ++++......
T Consensus 302 ---------------------------~~~~~~~~~~~~g~~l~~~~~~~~~---v~v~d~~~~~~~~~~~~-------- 343 (433)
T 3bws_A 302 ---------------------------PGNKRHIVSGNTENKIYVSDMCCSK---IEVYDLKEKKVQKSIPV-------- 343 (433)
T ss_dssp ---------------------------EECEEEEEECSSTTEEEEEETTTTE---EEEEETTTTEEEEEEEC--------
T ss_pred ---------------------------CCCcceEEECCCCCEEEEEecCCCE---EEEEECCCCcEEEEecC--------
Confidence 12478999999985 8899877764 566665 3443322210
Q ss_pred CCCCCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEeeecCCcccCCCCcEEEeCCCCCcEEEEecC
Q psy4832 478 NTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILALQHYLPTHDEHGEFKIPYPATNEIYVFNRY 556 (770)
Q Consensus 478 ~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i~~~~~~~~~~g~~~i~~~~~~e~yvfd~~ 556 (770)
...|.+++++|+|. ||++...++.+ . ..+-......+.++++|..
T Consensus 344 ----------------------~~~~~~~~~s~dg~~l~~~~~~~~~~-----~-------~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 344 ----------------------FDKPNTIALSPDGKYLYVSCRGPNHP-----T-------EGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp ----------------------SSSEEEEEECTTSSEEEEEECCCCCT-----T-------TCTTSCCSSCCEEEEEETT
T ss_pred ----------------------CCCCCeEEEcCCCCEEEEEecCCCcc-----c-------cccccccccceEEEEEECC
Confidence 13478999999996 77877655432 0 0000112334567777753
Q ss_pred -CceEEEEcCCCCCcEEEEEecCCCCCCceEEEECC
Q psy4832 557 -GQHITTRDMTSGKPRYSFLYSKNTSFGKLSTITDA 591 (770)
Q Consensus 557 -G~~~~t~d~~tg~~~y~~~Yd~~~~~G~L~~vtd~ 591 (770)
++.+..... +.....+.+..+ |+...+...
T Consensus 390 ~~~~~~~~~~--~~~~~~~~~s~d---g~~l~~~~~ 420 (433)
T 3bws_A 390 TDTVKEFWEA--GNQPTGLDVSPD---NRYLVISDF 420 (433)
T ss_dssp TTEEEEEEEC--SSSEEEEEECTT---SCEEEEEET
T ss_pred CCcEEEEecC--CCCCceEEEcCC---CCEEEEEEC
Confidence 444444433 233445556655 666555554
No 93
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.98 E-value=2.9e-07 Score=93.41 Aligned_cols=197 Identities=15% Similarity=0.129 Sum_probs=127.6
Q ss_pred eEEEEcCCCCEEEEeC----ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 183 VALTSGPDGSLYVGDF----NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~----~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
++|.++ ++.||++.. +.|+++|+. |++...+.++. -....||+++ ++.||++++.++++++++..
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~----- 115 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISDW--KDKIVGLTWKNGLGFVWNIR----- 115 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEESSSSEEEEEETT-----
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEEe--CCEEEEEEeeCCEEEEEECc-----
Confidence 788998 789999875 289999964 88887665422 1234567776 78999999999999999632
Q ss_pred CCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCC-CcEEEeecCCCCCCC
Q psy4832 258 PSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPE-GIIHTLIGHHKHHNI 334 (770)
Q Consensus 258 ~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~-G~i~t~~g~~~~~~~ 334 (770)
+.... .+.-. ..+.|++.| .+.||++|..+ |+++|+. .++..-+..+..
T Consensus 116 -t~~~~~ti~~~-----------------------~eG~glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~--- 167 (262)
T 3nol_A 116 -NLRQVRSFNYD-----------------------GEGWGLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAH--- 167 (262)
T ss_dssp -TCCEEEEEECS-----------------------SCCCCEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEET---
T ss_pred -cCcEEEEEECC-----------------------CCceEEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccC---
Confidence 23322 22110 034577765 45799999766 9999976 455433322110
Q ss_pred cCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCC-CCCCCCCCCCcccccccccc
Q psy4832 335 WSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIP-LHCRTGDKDKRDFKDKQSKT 410 (770)
Q Consensus 335 ~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~-~~~~~~~~~~~~~~~~~~~~ 410 (770)
...+..++.|.+. +|.||+.. .+.|.+||+ +|++....-.+ ......
T Consensus 168 -------------g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-------------- 218 (262)
T 3nol_A 168 -------------GEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG-------------- 218 (262)
T ss_dssp -------------TEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC--------------
T ss_pred -------------CccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccc--------------
Confidence 0124456678876 79999987 689999995 68876554321 100000
Q ss_pred ccccccCCcccccccccCCeeEEEEcCCC-CEEEEeCCCCceeeEEEE
Q psy4832 411 KKSTVQDDSVRASNMDLGSLTALAFSPTG-DLYIADIDARKVNALRVI 457 (770)
Q Consensus 411 ~~~~~~~~~~~a~~~~l~~P~giavd~~G-~lyVaD~~~~ri~~i~~i 457 (770)
........|+|||+||++ .|||+.-.=-++..|+..
T Consensus 219 -----------~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 219 -----------PLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp -----------SCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred -----------cccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 001224569999999965 599998765566666544
No 94
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.97 E-value=9.6e-07 Score=93.25 Aligned_cols=238 Identities=13% Similarity=0.142 Sum_probs=134.6
Q ss_pred CCEEEEeC--ceEEEEcC--CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEE
Q psy4832 191 GSLYVGDF--NLVRRLTP--EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAV 266 (770)
Q Consensus 191 G~lyv~d~--~~I~~i~~--~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~va 266 (770)
..||+++. +.|+.++. +|+...+... .....|.+++++|.+..||++...++.|..++.. ...+....+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~----~~~~~~~~~~ 78 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV--DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA----PDDGALTFAA 78 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEEC----TTTCCEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE--ecCCCCceEEECCCCCEEEEeecCCCeEEEEEec----CCCCceeecc
Confidence 45677754 46666654 4654332211 1234688999998555699999877787776431 0134443332
Q ss_pred CCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC-C-eEEECC-CCcEEEeecCCCCCCCcCCCccCC
Q psy4832 267 GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT-N-IRVVSP-EGIIHTLIGHHKHHNIWSPFNCHR 342 (770)
Q Consensus 267 G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~-~-Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~ 342 (770)
.... -..|.+|+++++|. ||++... + |+.++. +|........-
T Consensus 79 ~~~~--------------------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------------- 125 (343)
T 1ri6_A 79 ESAL--------------------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV------------- 125 (343)
T ss_dssp EEEC--------------------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-------------
T ss_pred cccc--------------------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-------------
Confidence 1000 11588999999997 8888753 3 666654 33222111100
Q ss_pred CcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEc--CCCcEEEEecCCCCCCCCCCCCccccccccccccccccC
Q psy4832 343 SFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLT--NDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQD 417 (770)
Q Consensus 343 ~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~--~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (770)
.....|.+++++| ++ .||+++ .+.|..++ .++++..+.......
T Consensus 126 ------~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~------------------------ 174 (343)
T 1ri6_A 126 ------EGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT------------------------ 174 (343)
T ss_dssp ------CCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC------------------------
T ss_pred ------cCCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeeccccccc------------------------
Confidence 0122478999999 66 589887 47777766 336654322000000
Q ss_pred CcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC---CCcEEEeecCccCCCCCcCCCCCcccccCccCcc
Q psy4832 418 DSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS---TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETL 493 (770)
Q Consensus 418 ~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~---~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~ 493 (770)
..-..|.+++++|+|. ||+++....+ |..++. .|++..+.-... .
T Consensus 175 -------~~~~~~~~~~~~pdg~~l~~~~~~~~~---i~~~~~~~~~g~~~~~~~~~~---------------------~ 223 (343)
T 1ri6_A 175 -------VEGAGPRHMVFHPNEQYAYCVNELNSS---VDVWELKDPHGNIECVQTLDM---------------------M 223 (343)
T ss_dssp -------STTCCEEEEEECTTSSEEEEEETTTTE---EEEEESSCTTSCCEEEEEEEC---------------------S
T ss_pred -------CCCCCcceEEECCCCCEEEEEeCCCCE---EEEEEecCCCCcEEEEeeccc---------------------c
Confidence 0013488999999998 8899877665 444443 344322110000 0
Q ss_pred cccceecCCeeEEEEcCCC-cEEEEcCCCceEEeeec
Q psy4832 494 LTSTARFTSISALSVSPDG-VVNVADQGSLHILALQH 529 (770)
Q Consensus 494 ~~~~~~l~~P~giav~~dG-~lyvaD~~~~~I~~i~~ 529 (770)
.........|.+++++|+| .||+++..++.|..+..
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 260 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCEEEEEEE
Confidence 0000113458899999999 57888877777766544
No 95
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.96 E-value=1.1e-07 Score=100.45 Aligned_cols=269 Identities=13% Similarity=0.207 Sum_probs=157.1
Q ss_pred CCccceeeeeecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC
Q psy4832 119 GWSLDVHHHYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF 198 (770)
Q Consensus 119 gw~l~~~~~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~ 198 (770)
-|+...+.. .....+.+.+| .+|+.. ..+.|..+..+|...-. .. ..-.....++++++|.|||+..
T Consensus 12 ~W~~~~~~~--~~~~~~~d~~g-~l~v~t-~~~~l~~~d~~g~~~~~----~~-----~~~~~~~~~~~~~~g~l~v~t~ 78 (330)
T 3hxj_A 12 KWEFLIGNS--IDSSPILAKNG-TIYLGS-SNKNLYAINTDGSVKWF----FK-----SGEIIECRPSIGKDGTIYFGSD 78 (330)
T ss_dssp CCTTTSCEE--ECCCCEECTTS-CEECSS-TTTTTEEECTTSCEEES----SC-----GGGEEEECCEETTTTEECCSSC
T ss_pred EEEEeCCCC--cccCceEccCC-eEEEEc-CCCEEEEECCCCcEEEE----Ee-----cCCCcccceEEecCCcEEEecC
Confidence 465543332 12345555566 467665 44444455444443210 00 0011235678889999999887
Q ss_pred ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCC
Q psy4832 199 NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDET 278 (770)
Q Consensus 199 ~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~ 278 (770)
+ |.+++++|+....+..... .....++. ++.||+... ++.|+++ +++|..........
T Consensus 79 ~-l~~~d~~g~~~~~~~~~~~---~~~~~~~~--~~~l~v~t~-~~~l~~~-------d~~g~~~~~~~~~~-------- 136 (330)
T 3hxj_A 79 K-VYAINPDGTEKWRFDTKKA---IVSDFTIF--EDILYVTSM-DGHLYAI-------NTDGTEKWRFKTKK-------- 136 (330)
T ss_dssp E-EEEECCCGGGGGGSCC--------CCEEEE--TTEEEEECT-TSEEEEE-------CTTSCEEEEEECSS--------
T ss_pred c-EEEECCCCcEEEEEECCCC---cccCceEE--CCEEEEEec-CCEEEEE-------cCCCCEEEEEcCCC--------
Confidence 8 9999988765432221111 11234454 788998764 4688888 44455432221110
Q ss_pred CcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCCCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceE
Q psy4832 279 NCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGL 357 (770)
Q Consensus 279 ~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gl 357 (770)
.....++++++|.||++.... |..++++|.+........ .....+
T Consensus 137 -------------~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~---------------------~~~~~~ 182 (330)
T 3hxj_A 137 -------------AIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTND---------------------AITSAA 182 (330)
T ss_dssp -------------CCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSS---------------------CCCSCC
T ss_pred -------------ceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCC---------------------Cceeee
Confidence 013456788899999998645 999998886644332110 123456
Q ss_pred EEeCCCCeEEEEeCCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcC
Q psy4832 358 ALSPLDDSLHFIDDRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSP 437 (770)
Q Consensus 358 a~d~~~g~lyv~D~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~ 437 (770)
++++ +|.||++. +.|++++++|+.......+. ....++++++
T Consensus 183 ~~d~-~g~l~v~t-~~l~~~d~~g~~~~~~~~~~------------------------------------~~~~~~~~~~ 224 (330)
T 3hxj_A 183 SIGK-DGTIYFGS-DKVYAINPDGTEKWNFYAGY------------------------------------WTVTRPAISE 224 (330)
T ss_dssp EECT-TCCEEEES-SSEEEECTTSCEEEEECCSS------------------------------------CCCSCCEECT
T ss_pred EEcC-CCEEEEEe-CEEEEECCCCcEEEEEccCC------------------------------------cceeceEECC
Confidence 7887 89999999 99999998886543331110 1246678899
Q ss_pred CCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEE
Q psy4832 438 TGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVA 517 (770)
Q Consensus 438 ~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyva 517 (770)
+|.||++..++. +..++++|......... . ..+..++++++|.||++
T Consensus 225 ~g~l~v~t~~~g----l~~~~~~g~~~~~~~~~--------------------~---------~~~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 225 DGTIYVTSLDGH----LYAINPDGTEKWRFKTG--------------------K---------RIESSPVIGNTDTIYFG 271 (330)
T ss_dssp TSCEEEEETTTE----EEEECTTSCEEEEEECS--------------------S---------CCCSCCEECTTSCEEEE
T ss_pred CCeEEEEcCCCe----EEEECCCCCEeEEeeCC--------------------C---------CccccceEcCCCeEEEe
Confidence 999999987543 66778877654322111 0 11234677888999998
Q ss_pred cCCCceEEeee
Q psy4832 518 DQGSLHILALQ 528 (770)
Q Consensus 518 D~~~~~I~~i~ 528 (770)
.... .|.++.
T Consensus 272 t~~g-gl~~~d 281 (330)
T 3hxj_A 272 SYDG-HLYAIN 281 (330)
T ss_dssp CTTC-EEEEEC
T ss_pred cCCC-CEEEEC
Confidence 7543 455554
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.95 E-value=1.1e-06 Score=96.56 Aligned_cols=226 Identities=18% Similarity=0.182 Sum_probs=144.7
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...++++.++|.+|++.. +.|+.++.+ ++....+. .....+..++++|.+..||++....+.|+.++.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~------ 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD---LTGKWSKILLYDPIRDLVYCSNWISEDISVIDR------ 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE---CSSSSEEEEEEETTTTEEEEEETTTTEEEEEET------
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc---CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC------
Confidence 467889999999999876 589888854 56555442 234568999999866678899988889998853
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC--------C-CeEEECCC-CcEEEee
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG--------T-NIRVVSPE-GIIHTLI 326 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~--------~-~Ir~id~~-G~i~t~~ 326 (770)
.++........ -..|.+++++++|. ||++.. . .|+.++.. +.+....
T Consensus 242 ~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 242 KTKLEIRKTDK----------------------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp TTTEEEEECCC----------------------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEecC----------------------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 12332211110 11378999999885 666652 2 27777753 4443333
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcc
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRD 402 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~ 402 (770)
+. -..|.+++++| ++ .||++. .+.|..++.+ +++......
T Consensus 300 ~~----------------------~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~------------- 343 (433)
T 3bws_A 300 GP----------------------PGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKSIPV------------- 343 (433)
T ss_dssp EE----------------------EECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEEEEC-------------
T ss_pred cC----------------------CCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEEecC-------------
Confidence 11 12577899999 66 688886 5788888854 443322210
Q ss_pred ccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCce-----------eeEEEEcC-CCcEEEeecC
Q psy4832 403 FKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKV-----------NALRVIDS-TGRMFDFAGR 469 (770)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri-----------~~i~~i~~-~G~i~~~aG~ 469 (770)
...|.+++++|+|. ||++....+.+ ..|+.++. ++++......
T Consensus 344 ------------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 344 ------------------------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp ------------------------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred ------------------------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC
Confidence 13478999999997 88888764321 13566664 4443322210
Q ss_pred ccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCc-EEEEcCCCceEEee
Q psy4832 470 WQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGV-VNVADQGSLHILAL 527 (770)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~-lyvaD~~~~~I~~i 527 (770)
-..|.+++++|+|. |+++...++.|+.+
T Consensus 400 ------------------------------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 400 ------------------------------GNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp ------------------------------SSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred ------------------------------CCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 12488999999995 46666655565544
No 97
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=2.6e-07 Score=94.84 Aligned_cols=204 Identities=10% Similarity=0.085 Sum_probs=128.2
Q ss_pred cceeEEEEeCCCCcEEEEeC--CCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEE
Q psy4832 222 SYQYYLALSPADGHLYISDA--EKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAI 299 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd~--~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIav 299 (770)
..|.||++++ ++.||++.. +.+.|.+++. .+|.+....-.+. ..++.||++
T Consensus 21 ~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~------~tg~v~~~i~l~~--------------------~~fgeGi~~ 73 (266)
T 2iwa_A 21 AFTQGLVYAE-NDTLFESTGLYGRSSVRQVAL------QTGKVENIHKMDD--------------------SYFGEGLTL 73 (266)
T ss_dssp CCEEEEEECS-TTEEEEEECSTTTCEEEEEET------TTCCEEEEEECCT--------------------TCCEEEEEE
T ss_pred CCcccEEEeC-CCeEEEECCCCCCCEEEEEEC------CCCCEEEEEecCC--------------------CcceEEEEE
Confidence 4689999997 589999974 4789999963 3455433221111 124568888
Q ss_pred ccCCcEEEEeCCC--eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEE
Q psy4832 300 KADKTMFIADGTN--IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIF 375 (770)
Q Consensus 300 d~~G~lYvaD~~~--Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~ 375 (770)
+ .+.||++.... +.++|++ +++..-+..+ . ..+.+|+.| .+.||+++ ++.|.
T Consensus 74 ~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~--------------------~~g~glt~D--g~~l~vs~gs~~l~ 129 (266)
T 2iwa_A 74 L-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M--------------------KDGWGLATD--GKILYGSDGTSILY 129 (266)
T ss_dssp E-TTEEEEEETTCSEEEEEETTTTEEEEEEECC-S--------------------SSCCEEEEC--SSSEEEECSSSEEE
T ss_pred e-CCEEEEEEecCCEEEEEECCCCcEEEEEECC-C--------------------CCeEEEEEC--CCEEEEECCCCeEE
Confidence 7 56899999765 8899965 5443333221 0 023344444 57799999 68999
Q ss_pred EEcCCC-cEE-EEe-cCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCcee
Q psy4832 376 KLTNDL-KVK-IVA-GIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVN 452 (770)
Q Consensus 376 ~i~~~G-~v~-~va-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~ 452 (770)
.||+.. ++. .+. |.. ...+..|+++.+. +|.||++.+..+.
T Consensus 130 viD~~t~~v~~~I~Vg~~---------------------------------~~p~~~~nele~~-dg~lyvn~~~~~~-- 173 (266)
T 2iwa_A 130 EIDPHTFKLIKKHNVKYN---------------------------------GHRVIRLNELEYI-NGEVWANIWQTDC-- 173 (266)
T ss_dssp EECTTTCCEEEEEECEET---------------------------------TEECCCEEEEEEE-TTEEEEEETTSSE--
T ss_pred EEECCCCcEEEEEEECCC---------------------------------CcccccceeEEEE-CCEEEEecCCCCe--
Confidence 999754 433 222 110 0124568999887 7899999987764
Q ss_pred eEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEEcCCCceEEeeec
Q psy4832 453 ALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVADQGSLHILALQH 529 (770)
Q Consensus 453 ~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyvaD~~~~~I~~i~~ 529 (770)
|.+||+ +|++....-.. +. . .............|.|||++|+| .+||+.....++..|.-
T Consensus 174 -V~vID~~tg~V~~~I~~~--g~----------~----~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 174 -IARISAKDGTLLGWILLP--NL----------R----KKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp -EEEEETTTCCEEEEEECH--HH----------H----HHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred -EEEEECCCCcEEEEEECC--Cc----------c----cccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 788887 77764432111 00 0 00000001123569999999987 68999999888887754
No 98
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=1.5e-06 Score=87.41 Aligned_cols=198 Identities=15% Similarity=0.106 Sum_probs=127.0
Q ss_pred ceEEEEcCCCCEEEEeC----ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 182 PVALTSGPDGSLYVGDF----NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~----~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
-.||.++. +.||++.. +.|+++++ +|++...+.++. -....|++++ ++.||++++.++++++++..
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~---- 93 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAW--RDRLIQLTWRNHEGFVYDLA---- 93 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEESSSSEEEEEETT----
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEe--CCEEEEEEeeCCEEEEEECC----
Confidence 36889985 89999976 38999996 588887664322 2234567776 79999999999999999632
Q ss_pred CCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCC-CcEEEeecCCCCCC
Q psy4832 257 DPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPE-GIIHTLIGHHKHHN 333 (770)
Q Consensus 257 ~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~-G~i~t~~g~~~~~~ 333 (770)
+.... .+.-. ..+.||+.| .+.||++|..+ |+++|+. .++..-+..+..
T Consensus 94 --tl~~~~ti~~~-----------------------~~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~-- 145 (243)
T 3mbr_X 94 --TLTPRARFRYP-----------------------GEGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG-- 145 (243)
T ss_dssp --TTEEEEEEECS-----------------------SCCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECEET--
T ss_pred --cCcEEEEEeCC-----------------------CCceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccC--
Confidence 22222 22110 035577765 46799999866 9999976 344433322211
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCC-CCCCCCCCCCccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIP-LHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~-~~~~~~~~~~~~~~~~~~~ 409 (770)
...+..++.|... +|.||+.. ++.|.+||+ +|++....-.+ .......
T Consensus 146 --------------g~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~------------ 197 (243)
T 3mbr_X 146 --------------GRPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA------------ 197 (243)
T ss_dssp --------------TEECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS------------
T ss_pred --------------CcccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc------------
Confidence 1124456677776 89999887 689999995 68876444221 1110000
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCC-CEEEEeCCCCceeeEEE
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTG-DLYIADIDARKVNALRV 456 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G-~lyVaD~~~~ri~~i~~ 456 (770)
........|+|||+||++ .|||+--.=-++..|+.
T Consensus 198 ------------~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 198 ------------LTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp ------------CCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ------------ccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 001223569999999964 59999876555555544
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.84 E-value=9.5e-06 Score=87.70 Aligned_cols=213 Identities=20% Similarity=0.336 Sum_probs=132.6
Q ss_pred CEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECC
Q psy4832 192 SLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGS 268 (770)
Q Consensus 192 ~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~ 268 (770)
.+|++.. +.|+.++.+ |+....+.. -..+..++++|.+..||++...++.|+.++. .++........
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~------~~~~~~~~~~~ 72 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHSNDVSIIDT------ATNNVIATVPA 72 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGGTEEEEEET------TTTEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeec----CCCcceEEECCCCCEEEEECCCCCeEEEEEC------CCCeEEEEEEC
Confidence 3555554 467777653 555554432 2348899999855568899888889988853 23433322210
Q ss_pred CccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC-C-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCc
Q psy4832 269 GERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT-N-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSF 344 (770)
Q Consensus 269 g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~-~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~ 344 (770)
-..|.+++++++|. ||++... + |+.+|.. +........+
T Consensus 73 ----------------------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--------------- 115 (391)
T 1l0q_A 73 ----------------------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--------------- 115 (391)
T ss_dssp ----------------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS---------------
T ss_pred ----------------------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC---------------
Confidence 01578999999887 7788754 3 8888865 4444333211
Q ss_pred ccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcc
Q psy4832 345 PASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSV 420 (770)
Q Consensus 345 ~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (770)
..|.+++++| ++. ||++. ++.|+.++. .++.......
T Consensus 116 -------~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------------------------------- 156 (391)
T 1l0q_A 116 -------KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSV------------------------------- 156 (391)
T ss_dssp -------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-------------------------------
T ss_pred -------CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEec-------------------------------
Confidence 1468999999 665 77876 578888884 4544332210
Q ss_pred cccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccce
Q psy4832 421 RASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTA 498 (770)
Q Consensus 421 ~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 498 (770)
-..|.+++++++|. ||++....+. |+.+|. +++.......
T Consensus 157 ------~~~~~~~~~~~dg~~l~~~~~~~~~---v~~~d~~~~~~~~~~~~----------------------------- 198 (391)
T 1l0q_A 157 ------GRSPKGIAVTPDGTKVYVANFDSMS---ISVIDTVTNSVIDTVKV----------------------------- 198 (391)
T ss_dssp ------CSSEEEEEECTTSSEEEEEETTTTE---EEEEETTTTEEEEEEEC-----------------------------
T ss_pred ------CCCcceEEECCCCCEEEEEeCCCCE---EEEEECCCCeEEEEEec-----------------------------
Confidence 02378999999986 7788777664 666664 3443322210
Q ss_pred ecCCeeEEEEcCCCc-EEEEcC--CCceEEeeec
Q psy4832 499 RFTSISALSVSPDGV-VNVADQ--GSLHILALQH 529 (770)
Q Consensus 499 ~l~~P~giav~~dG~-lyvaD~--~~~~I~~i~~ 529 (770)
-..|.+++++|+|. ||++.. .++.|+.++.
T Consensus 199 -~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 199 -EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp -SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred -CCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 12477899999885 566654 4556655543
No 100
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.84 E-value=1.2e-06 Score=94.59 Aligned_cols=226 Identities=12% Similarity=0.100 Sum_probs=121.1
Q ss_pred EEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCc
Q psy4832 202 RRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNC 280 (770)
Q Consensus 202 ~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~ 280 (770)
.++++ +|+...+..........|.+++++|.+..||+++.. .|..++. +++|....+.....
T Consensus 19 ~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~-----~~~g~~~~~~~~~~---------- 81 (365)
T 1jof_A 19 VQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK--KWSSFAV-----KSPTEIVHEASHPI---------- 81 (365)
T ss_dssp EEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT--EEEEEEE-----EETTEEEEEEEEEC----------
T ss_pred EEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc--eEEEEEE-----CCCCCEEEeeEeec----------
Confidence 34554 455543321111234578999999855559988876 6665532 12444432221000
Q ss_pred CCCcccccccccCcceEEEccCCc---EEEEe-------------CCC---eEEECCCCcEEEeecCCCCCCCcCCCccC
Q psy4832 281 GDNGPALAAKLSHPKGLAIKADKT---MFIAD-------------GTN---IRVVSPEGIIHTLIGHHKHHNIWSPFNCH 341 (770)
Q Consensus 281 g~~g~~~~a~l~~P~gIavd~~G~---lYvaD-------------~~~---Ir~id~~G~i~t~~g~~~~~~~~~p~~~~ 341 (770)
-..|..++++++|. +|+++ ... ++.++.+|.+...+..-.
T Consensus 82 ----------~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~----------- 140 (365)
T 1jof_A 82 ----------GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE----------- 140 (365)
T ss_dssp ----------CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE-----------
T ss_pred ----------CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE-----------
Confidence 01266788999998 33443 122 444555665543221000
Q ss_pred CCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcC--CCcEEEEecCCCCCCCCCCCCcccccccccccccccc
Q psy4832 342 RSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTN--DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQ 416 (770)
Q Consensus 342 ~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~--~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (770)
......|.+++++| +|+ ||++| .+.|+.++. +|++..+......
T Consensus 141 ------~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~------------------------ 189 (365)
T 1jof_A 141 ------YQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAP------------------------ 189 (365)
T ss_dssp ------CCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS------------------------
T ss_pred ------eCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC------------------------
Confidence 00123688999999 775 88888 468888774 5765433211000
Q ss_pred CCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEE----eecCccCCCCCcCCCCCcccccCcc
Q psy4832 417 DDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFD----FAGRWQSDKKNCNTTNCAEFEKNSK 490 (770)
Q Consensus 417 ~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~----~aG~~~~~~~~~~~~~~~~~~~~~~ 490 (770)
..-..|.+++++|+|. ||++...++.| .+..++. +|++.. +...+ .+. . .
T Consensus 190 --------~~g~~p~~~~~spdg~~l~v~~~~~~~v-~v~~~~~~~g~~~~~~~~~~~~~-~~~-----------~---g 245 (365)
T 1jof_A 190 --------DPGDHPRWVAMHPTGNYLYALMEAGNRI-CEYVIDPATHMPVYTHHSFPLIP-PGI-----------P---D 245 (365)
T ss_dssp --------STTCCEEEEEECTTSSEEEEEETTTTEE-EEEEECTTTCCEEEEEEEEESSC-TTC-----------C---C
T ss_pred --------CCCCCCCEeEECCCCCEEEEEECCCCeE-EEEEEeCCCCcEEEccceEEcCC-CCc-----------C---C
Confidence 0013489999999996 89998776654 2334454 576432 21111 000 0 0
Q ss_pred CcccccceecCCeeEEE-EcCCCc-EEEEcCCCc
Q psy4832 491 ETLLTSTARFTSISALS-VSPDGV-VNVADQGSL 522 (770)
Q Consensus 491 d~~~~~~~~l~~P~gia-v~~dG~-lyvaD~~~~ 522 (770)
.. ........|.+++ ++|||. ||+++.+.+
T Consensus 246 ~~--~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 246 RD--PETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp BC--TTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred cc--cccccccccccEEEECCCCCEEEEECCCCC
Confidence 00 0000122589999 999995 788876543
No 101
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.83 E-value=3.5e-06 Score=96.32 Aligned_cols=197 Identities=7% Similarity=0.003 Sum_probs=121.3
Q ss_pred EcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEE
Q psy4832 187 SGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWE 263 (770)
Q Consensus 187 ~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~ 263 (770)
++|+|.+||+.. +.|..++.+ |++...+..+ .. |.+++++|.+..||+++.. +.|..++... .++...
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g---~~-~~~v~~spdg~~l~v~~~d-~~V~v~D~~~----~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG---YA-VHISRMSASGRYLLVIGRD-ARIDMIDLWA----KEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECS---TT-EEEEEECTTSCEEEEEETT-SEEEEEETTS----SSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecC---cc-cceEEECCCCCEEEEECCC-CeEEEEECcC----CCCcEE
Confidence 678899999886 589999854 7777666422 12 8899999977789999887 8899985310 123221
Q ss_pred EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc----CCc-EEEEeC-CC-eEEECC-CCcEEEeecCCCCCCCc
Q psy4832 264 VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA----DKT-MFIADG-TN-IRVVSP-EGIIHTLIGHHKHHNIW 335 (770)
Q Consensus 264 ~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~----~G~-lYvaD~-~~-Ir~id~-~G~i~t~~g~~~~~~~~ 335 (770)
...-. -..|.+|++++ +|. ||++.. .+ |..+|. .+++...+.......
T Consensus 216 ~~i~~----------------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~-- 271 (543)
T 1nir_A 216 AEIKI----------------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV-- 271 (543)
T ss_dssp EEEEC----------------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS--
T ss_pred EEEec----------------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCccc--
Confidence 11111 11589999999 886 888874 23 888874 354433332211000
Q ss_pred CCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCC-Cc-EE--EEecCCCCCCCCCCCCccccccccc
Q psy4832 336 SPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTND-LK-VK--IVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 336 ~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~-v~--~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
+.. ....-.++.+|++++.++.+|++. .+.|..++.. +. +. .+. .
T Consensus 272 ------~~~--~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~-------------------- 322 (543)
T 1nir_A 272 ------DTQ--TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A-------------------- 322 (543)
T ss_dssp ------SSC--CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C--------------------
T ss_pred ------Ccc--ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c--------------------
Confidence 000 000012577899998444567765 5788888743 22 11 111 0
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEE
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFD 465 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~ 465 (770)
-..|.+++++|+|+ ||++....+. |..+|. +|++..
T Consensus 323 -----------------~~~~~~~~~spdg~~l~va~~~~~~---v~v~D~~tg~l~~ 360 (543)
T 1nir_A 323 -----------------APFLHDGGWDSSHRYFMTAANNSNK---VAVIDSKDRRLSA 360 (543)
T ss_dssp -----------------CSSCCCEEECTTSCEEEEEEGGGTE---EEEEETTTTEEEE
T ss_pred -----------------CcCccCceECCCCCEEEEEecCCCe---EEEEECCCCeEEE
Confidence 13488999999998 7888876654 667775 666543
No 102
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=1.9e-06 Score=90.88 Aligned_cols=207 Identities=14% Similarity=0.156 Sum_probs=135.6
Q ss_pred CCCEEEEeC-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECC
Q psy4832 190 DGSLYVGDF-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGS 268 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~ 268 (770)
+|.||++.. +.|.+++++|+.......... ....+++++ ++.||++.. ++.|+++ +++|........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~-~g~l~vgt~-~~~l~~~-------d~~g~~~~~~~~ 174 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKA---IYATPIVSE-DGTIYVGSN-DNYLYAI-------NPDGTEKWRFKT 174 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSC---CCSCCEECT-TSCEEEECT-TSEEEEE-------CTTSCEEEEEEC
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCc---eeeeeEEcC-CCEEEEEcC-CCEEEEE-------CCCCCEeEEEec
Confidence 899999985 589999988877654432221 234557774 889999764 4688888 444554322211
Q ss_pred CccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCCeEEECCCCcEEEeecCCCCCCCcCCCccCCCccccc
Q psy4832 269 GERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTNIRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPAST 348 (770)
Q Consensus 269 g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~ 348 (770)
. -.....+++|++|.||++. ..|.+++++|.........
T Consensus 175 ~---------------------~~~~~~~~~d~~g~l~v~t-~~l~~~d~~g~~~~~~~~~------------------- 213 (330)
T 3hxj_A 175 N---------------------DAITSAASIGKDGTIYFGS-DKVYAINPDGTEKWNFYAG------------------- 213 (330)
T ss_dssp S---------------------SCCCSCCEECTTCCEEEES-SSEEEECTTSCEEEEECCS-------------------
T ss_pred C---------------------CCceeeeEEcCCCEEEEEe-CEEEEECCCCcEEEEEccC-------------------
Confidence 0 0124467888899999999 6699999888654332211
Q ss_pred ccccCcceEEEeCCCCeEEEEe-CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccccccc
Q psy4832 349 AQLQWPTGLALSPLDDSLHFID-DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDL 427 (770)
Q Consensus 349 ~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 427 (770)
-.....+++++ +|.||++. ++.|++++++|........+.
T Consensus 214 --~~~~~~~~~~~-~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~------------------------------------ 254 (330)
T 3hxj_A 214 --YWTVTRPAISE-DGTIYVTSLDGHLYAINPDGTEKWRFKTGK------------------------------------ 254 (330)
T ss_dssp --SCCCSCCEECT-TSCEEEEETTTEEEEECTTSCEEEEEECSS------------------------------------
T ss_pred --CcceeceEECC-CCeEEEEcCCCeEEEECCCCCEeEEeeCCC------------------------------------
Confidence 12356788898 88999998 589999998886543321110
Q ss_pred CCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEE
Q psy4832 428 GSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALS 507 (770)
Q Consensus 428 ~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gia 507 (770)
..+..++++++|.||++...+. +..++++|++....... -....+++
T Consensus 255 ~~~~~~~~~~~g~l~v~t~~gg----l~~~d~~g~~~~~~~~~-----------------------------~~~~~~~~ 301 (330)
T 3hxj_A 255 RIESSPVIGNTDTIYFGSYDGH----LYAINPDGTEKWNFETG-----------------------------SWIIATPV 301 (330)
T ss_dssp CCCSCCEECTTSCEEEECTTCE----EEEECTTSCEEEEEECS-----------------------------SCCCSCCE
T ss_pred CccccceEcCCCeEEEecCCCC----EEEECCCCcEEEEEEcC-----------------------------CccccceE
Confidence 0123466788999999987643 67788888754432111 01234578
Q ss_pred EcCCCcEEEEcCCC
Q psy4832 508 VSPDGVVNVADQGS 521 (770)
Q Consensus 508 v~~dG~lyvaD~~~ 521 (770)
++++|.||++....
T Consensus 302 ~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 302 IDENGTIYFGTRNG 315 (330)
T ss_dssp ECTTCCEEEECTTS
T ss_pred EcCCCEEEEEcCCC
Confidence 88999999987543
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.81 E-value=9.9e-07 Score=89.51 Aligned_cols=194 Identities=12% Similarity=0.083 Sum_probs=123.3
Q ss_pred eEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCC
Q psy4832 183 VALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPS 259 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~ 259 (770)
.+|.++ ++.||++.. ++|+++|+ +|++...+ ++.. ....|++++ ++.||++++.++++++++.. +
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~------T 125 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN--IFAEGLASD--GERLYQLTWTEGLLFTWSGM------P 125 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--CCEEEEEEC--SSCEEEEESSSCEEEEEETT------T
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--cceeEEEEe--CCEEEEEEccCCEEEEEECC------c
Confidence 688887 589999987 48999996 47776554 4321 223567776 78999999999999999632 2
Q ss_pred CcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCC-CcEEEeecCCCCCCCcC
Q psy4832 260 INWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPE-GIIHTLIGHHKHHNIWS 336 (770)
Q Consensus 260 g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~-G~i~t~~g~~~~~~~~~ 336 (770)
.... .+.-. ..+.|++.| .+.||++|..+ |+++|+. .++..-+..+..
T Consensus 126 l~~~~ti~~~-----------------------~eGwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~----- 176 (268)
T 3nok_A 126 PQRERTTRYS-----------------------GEGWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR----- 176 (268)
T ss_dssp TEEEEEEECS-----------------------SCCCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEET-----
T ss_pred CcEEEEEeCC-----------------------CceeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC-----
Confidence 3322 22110 124577766 45799999766 9999976 455433322211
Q ss_pred CCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCC-CCCCCCCCCCcccccccccccc
Q psy4832 337 PFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIP-LHCRTGDKDKRDFKDKQSKTKK 412 (770)
Q Consensus 337 p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~-~~~~~~~~~~~~~~~~~~~~~~ 412 (770)
...+..++.|.+. +|.||+.. .+.|.+||+ +|++....-.. .....
T Consensus 177 -----------g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~----------------- 226 (268)
T 3nok_A 177 -----------GQPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAV----------------- 226 (268)
T ss_dssp -----------TEECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHH-----------------
T ss_pred -----------CcccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccc-----------------
Confidence 1124567788877 88999987 689999996 68876444211 00000
Q ss_pred ccccCCcccccccccCCeeEEEEcCC-CCEEEEeCCCCceeeE
Q psy4832 413 STVQDDSVRASNMDLGSLTALAFSPT-GDLYIADIDARKVNAL 454 (770)
Q Consensus 413 ~~~~~~~~~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i 454 (770)
..........|+|||++|+ +.|||+.-.=-++..|
T Consensus 227 -------~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 227 -------AGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp -------TTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred -------cccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 0000112356999999995 5699998654444444
No 104
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.78 E-value=1.9e-06 Score=95.96 Aligned_cols=268 Identities=19% Similarity=0.202 Sum_probs=140.4
Q ss_pred eeecCCCeEEECCCc-cEEecccCCCeEEEEeccCcc--CCccC-C--CCCcccccccccCceEEEEcCC----CCEEEE
Q psy4832 127 HYNFHEGILQKGDGS-SLHLKHEFPRTVSVVMGTGLQ--RPLVC-K--DCDGVARDARLLTPVALTSGPD----GSLYVG 196 (770)
Q Consensus 127 ~~~~~~gil~~~dG~-~~~~~~~~~~~i~~v~g~G~~--~~~~~-~--~~~g~~~~~~l~~P~~la~~~d----G~lyv~ 196 (770)
-|+.|.+++..+||+ .+||++ .++.|..+..+|.. .++.- . ...+. .......+.+||++|+ |.|||+
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~-~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHKLVQSGI-KGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTTTBCCCC-SSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred CCCCceEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcceeccCc-cccCCCcceeeEeCCCCcCCCEEEEE
Confidence 377888999999996 699998 88999988765542 11110 0 00000 0011345689999995 899997
Q ss_pred eC--------------ceEEEEcCC---------CcEEEEeccC-cccccceeEEEEeCCCCcEEEEeCC----------
Q psy4832 197 DF--------------NLVRRLTPE---------GNVFTVLQLS-ATQVSYQYYLALSPADGHLYISDAE---------- 242 (770)
Q Consensus 197 d~--------------~~I~~i~~~---------G~v~~~~~~~-~~~~~~p~~lav~p~~g~lyvsd~~---------- 242 (770)
-. ++|.|+..+ .+...++... ...-.+...|+|+| +|.|||+--.
T Consensus 90 yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~ 168 (463)
T 2wg3_C 90 YTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEE 168 (463)
T ss_dssp EEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHH
T ss_pred EeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCcccc
Confidence 43 377777532 1223444322 12234456899998 8999998433
Q ss_pred -------CcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCC---cccccccccCcceEEEccC-----C--cE
Q psy4832 243 -------KHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDN---GPALAAKLSHPKGLAIKAD-----K--TM 305 (770)
Q Consensus 243 -------~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~---g~~~~a~l~~P~gIavd~~-----G--~l 305 (770)
.++|+||+ ++|.- ..+....|.++.+.+.. ..-...-+.+|.||++|+. | .+
T Consensus 169 ~q~~~~~~GkIlRi~-------~dg~~----~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 169 MDGLSDFTGSVLRLD-------VDTDM----CNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp CTTCCSCTTEEEEEB-------CCCCC----SSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEE
T ss_pred ccCcCCCCeeEEEEE-------CCCCc----ccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEE
Confidence 24677773 34320 00111223222232221 1223345779999999986 5 46
Q ss_pred EEEeCCCeEEECCCCcEEEeecCCCCCCCcC-CCccCCCcccccccccCcceEEEeC------CCCeEEEEe-CCEEEEE
Q psy4832 306 FIADGTNIRVVSPEGIIHTLIGHHKHHNIWS-PFNCHRSFPASTAQLQWPTGLALSP------LDDSLHFID-DRVIFKL 377 (770)
Q Consensus 306 YvaD~~~Ir~id~~G~i~t~~g~~~~~~~~~-p~~~~~~~~~~~~~l~~P~gla~d~------~~g~lyv~D-~~~I~~i 377 (770)
|.+|..... . ....|..+......+ |. |... .....=..|.|++|-. ..|.++|+| .++|+++
T Consensus 238 ~~~D~~G~~-~-~~~ei~~i~~G~~yG--~~~P~~~-----~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~ 308 (463)
T 2wg3_C 238 LCSDSNGKN-R-SSARILQIIKGKDYE--SEPSLLE-----FKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTL 308 (463)
T ss_dssp EEECC--------CEEEEEEC----CC--SCCCCEE-----CCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEE
T ss_pred EecccCCCC-C-CCCeEeeeccCCCCC--CCCCeEE-----eeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEE
Confidence 778851100 0 001222221100000 11 1100 0000003578888852 245689998 5678777
Q ss_pred cCCCc-----EEEE-ecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeC
Q psy4832 378 TNDLK-----VKIV-AGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADI 446 (770)
Q Consensus 378 ~~~G~-----v~~v-aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~ 446 (770)
..+.. ...+ .|.+..+ .......|.+|+++|+|.|||+|.
T Consensus 309 ~~~~~~~~~~~~~~~~g~~~~~-----------------------------~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 309 QQSPVTKQWQEKPLCLGTSGSC-----------------------------RGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp EC-----CCEEEEECEEETTSS-----------------------------CSCCCSEEEEEEECTTCCEEEEEE
T ss_pred EeCCCCceeeEEEeecCCcccc-----------------------------cccccCcceEEEECCCCCEEEEec
Confidence 64321 1111 1211110 011235699999999999999997
No 105
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.74 E-value=2.8e-06 Score=91.81 Aligned_cols=108 Identities=14% Similarity=0.078 Sum_probs=72.5
Q ss_pred eEEECCCccEEecccC----CCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC----------
Q psy4832 134 ILQKGDGSSLHLKHEF----PRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF---------- 198 (770)
Q Consensus 134 il~~~dG~~~~~~~~~----~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~---------- 198 (770)
++..+||..+|+++.. .+.|.++...-.. .+ ..-.-=..|. |+++|||. |||++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~-v~--------~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR-VI--------GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE-EE--------EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCe-EE--------EEEECCCCCc-EEECCCCCEEEEEcccccccccCCC
Confidence 5667889999999843 4678887653211 11 0000013475 99999986 999872
Q ss_pred -ceEEEEcCC-CcEEEEeccCcc----cccceeEEEEeCCCCcEEEEeCC-CcEEEEEec
Q psy4832 199 -NLVRRLTPE-GNVFTVLQLSAT----QVSYQYYLALSPADGHLYISDAE-KHQILRVLS 251 (770)
Q Consensus 199 -~~I~~i~~~-G~v~~~~~~~~~----~~~~p~~lav~p~~g~lyvsd~~-~~~I~~i~~ 251 (770)
+.|.+||.. +++...+..+.. .-..|.+++++|.+..|||++.. .+.|..|+.
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~ 167 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL 167 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEEC
Confidence 569999965 666654433221 13479999999977789999874 688999963
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.72 E-value=3e-05 Score=88.56 Aligned_cols=193 Identities=9% Similarity=0.020 Sum_probs=115.4
Q ss_pred ECCCccEEecccCCCeEEEEecc-CccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC-ceEEEEcC---CCcE
Q psy4832 137 KGDGSSLHLKHEFPRTVSVVMGT-GLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF-NLVRRLTP---EGNV 210 (770)
Q Consensus 137 ~~dG~~~~~~~~~~~~i~~v~g~-G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~-~~I~~i~~---~G~v 210 (770)
..+| .+|++....+.|.++.+. |... ..- .... .|.+++++|||. ||+++. +.|+.++. ++++
T Consensus 146 ~p~~-~~~vs~~~d~~V~v~D~~t~~~~--------~~i-~~g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 146 DLPN-LFSVTLRDAGQIALVDGDSKKIV--------KVI-DTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CGGG-EEEEEEGGGTEEEEEETTTCCEE--------EEE-ECST-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCC-EEEEEEcCCCeEEEEECCCceEE--------EEE-ecCc-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcE
Confidence 3455 466666566777777643 2110 000 0011 289999999986 788776 68999987 4665
Q ss_pred EEEeccCcccccceeEEEEeC----CCCcEEEEeCCCcEEEEEeccCCccCCCCcE-EEEECCCccccCCCCCCcCCCcc
Q psy4832 211 FTVLQLSATQVSYQYYLALSP----ADGHLYISDAEKHQILRVLSLESVADPSINW-EVAVGSGERCIPGDETNCGDNGP 285 (770)
Q Consensus 211 ~~~~~~~~~~~~~p~~lav~p----~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~ 285 (770)
...+.. -..|.+++++| .+..||+++...+.|..++. .++.. .++...+.. .++.
T Consensus 215 ~~~i~~----g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~------~t~~~~~~i~~~g~~---------~~~~- 274 (543)
T 1nir_A 215 VAEIKI----GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG------ETLEPKQIVSTRGMT---------VDTQ- 274 (543)
T ss_dssp EEEEEC----CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET------TTCCEEEEEECCEEC---------SSSC-
T ss_pred EEEEec----CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec------cccccceeecccCcc---------cCcc-
Confidence 544432 24699999998 78889999987788888853 23332 233221110 0000
Q ss_pred cccccccCcceEEEccCCc-EEEEeCCC--eEEECCCC-c-EE-EeecCCCCCCCcCCCccCCCcccccccccCcceEEE
Q psy4832 286 ALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPEG-I-IH-TLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLAL 359 (770)
Q Consensus 286 ~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~G-~-i~-t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~ 359 (770)
. -..-..+.+|++++++. +|++.... |..+|... . +. +.+.. -.+|.++++
T Consensus 275 ~-~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~----------------------~~~~~~~~~ 331 (543)
T 1nir_A 275 T-YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA----------------------APFLHDGGW 331 (543)
T ss_dssp C-EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC----------------------CSSCCCEEE
T ss_pred c-cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc----------------------CcCccCceE
Confidence 0 00011467899988655 66665433 77777432 1 11 11111 126889999
Q ss_pred eCCCCe-EEEEe--CCEEEEEcC-CCcEE
Q psy4832 360 SPLDDS-LHFID--DRVIFKLTN-DLKVK 384 (770)
Q Consensus 360 d~~~g~-lyv~D--~~~I~~i~~-~G~v~ 384 (770)
+| +|+ ||++. ++.|..++. +|++.
T Consensus 332 sp-dg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 332 DS-SHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp CT-TSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CC-CCCEEEEEecCCCeEEEEECCCCeEE
Confidence 99 776 78886 478999994 56654
No 107
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.69 E-value=5.2e-06 Score=87.87 Aligned_cols=159 Identities=11% Similarity=0.056 Sum_probs=96.5
Q ss_pred eEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCC
Q psy4832 183 VALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPS 259 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~ 259 (770)
.++++.+++.+|++.. +.|++++.+ |++...+..+ ....|.+++++|.+..+|++...++.|+.++. .+
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~------~t 74 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP--DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL------DT 74 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS--SCCSSCEEEECTTSSEEEEEETTTTEEEEEET------TT
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC--CCCCCceeEECCCCCEEEEEeCCCCcEEEEeC------CC
Confidence 4566777888998875 589999864 6666555322 12258899999855569999988899999953 23
Q ss_pred CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC-------------CCeEEECCC-CcEEE
Q psy4832 260 INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG-------------TNIRVVSPE-GIIHT 324 (770)
Q Consensus 260 g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~-------------~~Ir~id~~-G~i~t 324 (770)
+........+.. . ...-..|.+++++++|. ||++.. ..|+.+|.. +.+..
T Consensus 75 ~~~~~~~~~~~~-----------~----~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 139 (349)
T 1jmx_B 75 CKNTFHANLSSV-----------P----GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK 139 (349)
T ss_dssp TEEEEEEESCCS-----------T----TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC
T ss_pred CcEEEEEEcccc-----------c----ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc
Confidence 433322211000 0 00123588999999986 788763 236666643 21110
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeCCEEEEEcC-CCcEEE
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVIFKLTN-DLKVKI 385 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I~~i~~-~G~v~~ 385 (770)
..... ..-..+.+++++| +|+||+++. .|+.++. ++++..
T Consensus 140 ~~~~~-------------------~~~~~~~~~~~s~-dg~l~~~~~-~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 140 PVRTF-------------------PMPRQVYLMRAAD-DGSLYVAGP-DIYKMDVKTGKYTV 180 (349)
T ss_dssp CSEEE-------------------ECCSSCCCEEECT-TSCEEEESS-SEEEECTTTCCEEE
T ss_pred eeeec-------------------cCCCcccceeECC-CCcEEEccC-cEEEEeCCCCceec
Confidence 00000 0011477899999 888888754 4899985 566543
No 108
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.68 E-value=0.0015 Score=75.40 Aligned_cols=232 Identities=15% Similarity=0.118 Sum_probs=125.0
Q ss_pred CceEEEEcCCCCEEE-EeCceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 181 TPVALTSGPDGSLYV-GDFNLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 181 ~P~~la~~~dG~lyv-~d~~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
.|..++++|||...+ +..+.|+..+. +++....+. ..-.....++++| +|.+.++-...+.|+..+... .
T Consensus 20 ~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~---~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~----~ 91 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYT---EHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQ----T 91 (611)
T ss_dssp CCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSS----T
T ss_pred ceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEec---CCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCC----C
Confidence 567789999997555 44467777765 355555442 1223467899998 787777776677777774211 1
Q ss_pred CCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-C-----CeEEECCCCcEEEeecCCCC
Q psy4832 259 SINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-T-----NIRVVSPEGIIHTLIGHHKH 331 (770)
Q Consensus 259 ~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~-----~Ir~id~~G~i~t~~g~~~~ 331 (770)
..... .+.+. -..-..|+++++|...++-+ . .|+..+....+.++.|
T Consensus 92 ~~~~~~~~~~~----------------------~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~g---- 145 (611)
T 1nr0_A 92 THILKTTIPVF----------------------SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG---- 145 (611)
T ss_dssp TCCEEEEEECS----------------------SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC----
T ss_pred cceeeEeeccc----------------------CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecC----
Confidence 11111 11110 01245899999988655422 1 1444442211111111
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEc-CCCcEE-EEecCCCCCCCCCCCCcccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLT-NDLKVK-IVAGIPLHCRTGDKDKRDFKDK 406 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~-~~G~v~-~vaG~~~~~~~~~~~~~~~~~~ 406 (770)
.-.....++++| ++. ++++- .+.|+..+ ..++.. ++.| +
T Consensus 146 ------------------h~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~---H-------------- 189 (611)
T 1nr0_A 146 ------------------QARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGE---H-------------- 189 (611)
T ss_dssp ------------------CSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECC---C--------------
T ss_pred ------------------CCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeecc---c--------------
Confidence 122457899999 664 34433 45666665 233322 2211 1
Q ss_pred ccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc-CCCcEEEeecCccCCCCCcCCCCCccc
Q psy4832 407 QSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID-STGRMFDFAGRWQSDKKNCNTTNCAEF 485 (770)
Q Consensus 407 ~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~-~~G~i~~~aG~~~~~~~~~~~~~~~~~ 485 (770)
-....+++++|+|.++++-...+. |+..+ .+|+.........
T Consensus 190 --------------------~~~V~~v~fspdg~~las~s~D~~---i~lwd~~~g~~~~~~~~~~-------------- 232 (611)
T 1nr0_A 190 --------------------TKFVHSVRYNPDGSLFASTGGDGT---IVLYNGVDGTKTGVFEDDS-------------- 232 (611)
T ss_dssp --------------------SSCEEEEEECTTSSEEEEEETTSC---EEEEETTTCCEEEECBCTT--------------
T ss_pred --------------------cCceEEEEECCCCCEEEEEECCCc---EEEEECCCCcEeeeecccc--------------
Confidence 123689999999998887666554 55555 3454332221000
Q ss_pred ccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEee
Q psy4832 486 EKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 486 ~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i 527 (770)
....+.-....+|+++|+|.++++-...+.|+..
T Consensus 233 --------~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 233 --------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 266 (611)
T ss_dssp --------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred --------ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 0000111346789999998877765444444443
No 109
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.66 E-value=3.3e-06 Score=85.63 Aligned_cols=200 Identities=14% Similarity=0.079 Sum_probs=122.5
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccC
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKAD 302 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~ 302 (770)
.-.||.++ ++.||++....++|++++.. +|.+..-. .+. -.+..||+++ .
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~------Tgkv~~~~-l~~--------------------~~FgeGit~~-g 105 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLE------SAQPVWME-RLG--------------------NIFAEGLASD-G 105 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSS------CSSCSEEE-ECT--------------------TCCEEEEEEC-S
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECC------CCcEEeEE-CCC--------------------CcceeEEEEe-C
Confidence 34799998 68999999999999998532 23321111 110 0134578887 4
Q ss_pred CcEEEEeCCC--eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEc
Q psy4832 303 KTMFIADGTN--IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLT 378 (770)
Q Consensus 303 G~lYvaD~~~--Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~ 378 (770)
+.||++.+.. +.++|++ +++..-+... ..+.||+.| ++.||++| +++|..+|
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~----------------------~eGwGLt~D--g~~L~vSdGs~~l~~iD 161 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPPQRERTTRYS----------------------GEGWGLCYW--NGKLVRSDGGTMLTFHE 161 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTTEEEEEEECS----------------------SCCCCEEEE--TTEEEEECSSSEEEEEC
T ss_pred CEEEEEEccCCEEEEEECCcCcEEEEEeCC----------------------CceeEEecC--CCEEEEECCCCEEEEEc
Confidence 6899998665 9999964 5444333221 124578877 67899999 78999999
Q ss_pred CC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEE
Q psy4832 379 ND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVI 457 (770)
Q Consensus 379 ~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i 457 (770)
+. .++..-.-..... ..+..++.|... +|.||++.+..+ .|.+|
T Consensus 162 p~T~~v~~~I~V~~~g-------------------------------~~v~~lNeLe~~-dG~lyanvw~s~---~I~vI 206 (268)
T 3nok_A 162 PDGFALVGAVQVKLRG-------------------------------QPVELINELECA-NGVIYANIWHSS---DVLEI 206 (268)
T ss_dssp TTTCCEEEEEECEETT-------------------------------EECCCEEEEEEE-TTEEEEEETTCS---EEEEE
T ss_pred CCCCeEEEEEEeCCCC-------------------------------cccccccccEEe-CCEEEEEECCCC---eEEEE
Confidence 65 4443222111000 123456778776 889999998876 47888
Q ss_pred cC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCC-CcEEEEcCCCceEEee
Q psy4832 458 DS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPD-GVVNVADQGSLHILAL 527 (770)
Q Consensus 458 ~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~d-G~lyvaD~~~~~I~~i 527 (770)
|+ +|++....-... +... .. ........-|.|||.+|+ +.|||+...=.+++.|
T Consensus 207 Dp~TG~V~~~Idl~~------------L~~~--~~--~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 207 DPATGTVVGVIDASA------------LTRA--VA--GQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp CTTTCBEEEEEECHH------------HHHH--HT--TTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred eCCCCcEEEEEECCC------------Cccc--cc--ccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 97 888765432110 0000 00 000112346899999995 4789987554455444
No 110
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.66 E-value=5.6e-06 Score=87.06 Aligned_cols=117 Identities=20% Similarity=0.270 Sum_probs=75.9
Q ss_pred CceEEEEcCCCC-EEEEeC--ceEEEEcC-CCcEEEEeccCcc--cccceeEEEEeCCCCcEEEEeC-----------CC
Q psy4832 181 TPVALTSGPDGS-LYVGDF--NLVRRLTP-EGNVFTVLQLSAT--QVSYQYYLALSPADGHLYISDA-----------EK 243 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~--~~I~~i~~-~G~v~~~~~~~~~--~~~~p~~lav~p~~g~lyvsd~-----------~~ 243 (770)
.|.+++++|+|. +|++.. +.|..++. +|+....+..+.. .-..|.+++++|.+..||+++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 488899999995 788876 48999985 4776655432110 1125789999985558999862 24
Q ss_pred cEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCCeEEECCC-Cc
Q psy4832 244 HQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTNIRVVSPE-GI 321 (770)
Q Consensus 244 ~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~Ir~id~~-G~ 321 (770)
+.|+.++. .++........+ ..|.+++++++|. ||+++ ..|+.+|.. +.
T Consensus 115 ~~i~v~d~------~~~~~~~~~~~~----------------------~~~~~~~~s~dg~~l~~~~-~~i~~~d~~~~~ 165 (337)
T 1pby_B 115 TRVALYDA------ETLSRRKAFEAP----------------------RQITMLAWARDGSKLYGLG-RDLHVMDPEAGT 165 (337)
T ss_dssp CEEEEEET------TTTEEEEEEECC----------------------SSCCCEEECTTSSCEEEES-SSEEEEETTTTE
T ss_pred ceEEEEEC------CCCcEEEEEeCC----------------------CCcceeEECCCCCEEEEeC-CeEEEEECCCCc
Confidence 77888853 122222211111 1478999999987 88883 458888864 55
Q ss_pred EEEee
Q psy4832 322 IHTLI 326 (770)
Q Consensus 322 i~t~~ 326 (770)
+...+
T Consensus 166 ~~~~~ 170 (337)
T 1pby_B 166 LVEDK 170 (337)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 54433
No 111
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.65 E-value=8.7e-06 Score=89.47 Aligned_cols=104 Identities=19% Similarity=0.190 Sum_probs=69.0
Q ss_pred CCCccEEecccCC----CeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC-----------ceE
Q psy4832 138 GDGSSLHLKHEFP----RTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF-----------NLV 201 (770)
Q Consensus 138 ~dG~~~~~~~~~~----~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~-----------~~I 201 (770)
.++..+|+++... +.|+++...-... +. . ... =..| +|+++|||. |||++. +.|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-v~------~-I~v-G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI-LG------M-TDG-GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE-EE------E-EEE-CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE-EE------E-EEC-CCCC-ceEECCCCCEEEEEeccccccccCCCCCEE
Confidence 5777788887332 5777776432111 00 0 000 1358 999999985 999973 479
Q ss_pred EEEcCC-CcEEEEeccC-ccc---ccceeEEEEeCCCCcEEEEeCC-CcEEEEEec
Q psy4832 202 RRLTPE-GNVFTVLQLS-ATQ---VSYQYYLALSPADGHLYISDAE-KHQILRVLS 251 (770)
Q Consensus 202 ~~i~~~-G~v~~~~~~~-~~~---~~~p~~lav~p~~g~lyvsd~~-~~~I~~i~~ 251 (770)
.+||.. +++...+..+ ... ...|.+++++|.+..|||++.. .+.|..|+.
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred EEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence 999964 6766554332 111 2579999999977799999875 788999963
No 112
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.64 E-value=8.5e-06 Score=82.65 Aligned_cols=201 Identities=14% Similarity=0.095 Sum_probs=122.2
Q ss_pred cceeEEEEeCCCCcEEEEeCCC--cEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEE
Q psy4832 222 SYQYYLALSPADGHLYISDAEK--HQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAI 299 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd~~~--~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIav 299 (770)
..-.||.++ ++.||++.... .+|++++. .+|.+..-...+. -.+..||++
T Consensus 43 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~------~Tgkv~~~~~l~~--------------------~~FgeGit~ 94 (262)
T 3nol_A 43 AFTEGFFYR--NGYFYESTGLNGRSSIRKVDI------ESGKTLQQIELGK--------------------RYFGEGISD 94 (262)
T ss_dssp CEEEEEEEE--TTEEEEEEEETTEEEEEEECT------TTCCEEEEEECCT--------------------TCCEEEEEE
T ss_pred cccceEEEE--CCEEEEECCCCCCceEEEEEC------CCCcEEEEEecCC--------------------ccceeEEEE
Confidence 344899998 68999998653 58999953 2455433221110 013457888
Q ss_pred ccCCcEEEEeCCC--eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEE
Q psy4832 300 KADKTMFIADGTN--IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIF 375 (770)
Q Consensus 300 d~~G~lYvaD~~~--Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~ 375 (770)
+ .+.||++.+.. +.++|++ +++..-+..+. .+.||+.| ++.||++| +++|+
T Consensus 95 ~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~----------------------eG~glt~d--g~~L~~SdGs~~i~ 149 (262)
T 3nol_A 95 W-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG----------------------EGWGLTHN--DQYLIMSDGTPVLR 149 (262)
T ss_dssp E-TTEEEEEESSSSEEEEEETTTCCEEEEEECSS----------------------CCCCEEEC--SSCEEECCSSSEEE
T ss_pred e-CCEEEEEEeeCCEEEEEECccCcEEEEEECCC----------------------CceEEecC--CCEEEEECCCCeEE
Confidence 7 56899998755 8899964 54433332211 24567755 67899999 78999
Q ss_pred EEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeE
Q psy4832 376 KLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNAL 454 (770)
Q Consensus 376 ~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i 454 (770)
.+|+. .++..-.-.... ...+..++.+.+. +|.||++.+..+. |
T Consensus 150 ~iDp~T~~v~~~I~V~~~-------------------------------g~~~~~lNELe~~-~G~lyan~w~~~~---I 194 (262)
T 3nol_A 150 FLDPESLTPVRTITVTAH-------------------------------GEELPELNELEWV-DGEIFANVWQTNK---I 194 (262)
T ss_dssp EECTTTCSEEEEEECEET-------------------------------TEECCCEEEEEEE-TTEEEEEETTSSE---E
T ss_pred EEcCCCCeEEEEEEeccC-------------------------------CccccccceeEEE-CCEEEEEEccCCe---E
Confidence 99976 454322211000 0123456677765 7899999998764 7
Q ss_pred EEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEEcCCCceEEee
Q psy4832 455 RVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVADQGSLHILAL 527 (770)
Q Consensus 455 ~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyvaD~~~~~I~~i 527 (770)
.+||+ +|++........ +... .. ........|.|||.+|++ .|||+...=.++++|
T Consensus 195 ~vIDp~tG~V~~~Id~~~------------L~~~--~~---~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNG------------ILAE--AG---PLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp EEECTTTCBEEEEEECTT------------GGGG--SC---SCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred EEEECCCCcEEEEEECCc------------Cccc--cc---cccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 88897 888765542210 0000 00 011124569999999964 788887655555554
No 113
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.64 E-value=3.2e-06 Score=88.80 Aligned_cols=243 Identities=13% Similarity=0.098 Sum_probs=140.2
Q ss_pred EECCCccEEeccc-CCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC---------------c
Q psy4832 136 QKGDGSSLHLKHE-FPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF---------------N 199 (770)
Q Consensus 136 ~~~dG~~~~~~~~-~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~---------------~ 199 (770)
...+|..+|++.. ....|.++.-+|......+ + ..+..|.++ ++.||.+.. +
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~---~--------~~~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~ 88 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLS---N--------DTAMYINAD-KNYVYYVRNNNQKITSQTFFSYDRN 88 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEE---E--------EEEEEEEEC-SSEEEEEEECC------CCSSCCSE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEcc---C--------CceeeEEEc-CCEEEEEECCCCcccccceeccCCC
Confidence 3346667777752 2456777765554321100 0 123455543 455777653 3
Q ss_pred eEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEe---CCCcEEEEEeccCCccCCCCc-EEEEECCCccccCC
Q psy4832 200 LVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISD---AEKHQILRVLSLESVADPSIN-WEVAVGSGERCIPG 275 (770)
Q Consensus 200 ~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd---~~~~~I~~i~~~~~~~~~~g~-~~~vaG~g~~~~p~ 275 (770)
.|++++.+|...+.+.. . .+.++++.++.||+++ ..+..|++++. +|. .+.+....
T Consensus 89 ~Iy~i~~dg~~~~~l~~---~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~-------dGs~~~~lt~~~------ 148 (302)
T 3s25_A 89 SLCRIKRNGHGSTVLDP---D----PCIYASLIGNYIYYLHYDTQTATSLYRIRI-------DGEEKKKIKNHY------ 148 (302)
T ss_dssp EEEEEETTSCCCEEEEC---S----CEEEEEEETTEEEEEEESSSSCEEEEEEET-------TSCCCEEEESSC------
T ss_pred eEEEEeCCCCcceEeec---C----CccEEEEeCCEEEEEeecCCCCceEEEEEC-------CCCCeEEEeCCC------
Confidence 79999999876555421 1 1234555589999999 67889999953 332 22332110
Q ss_pred CCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC--eEEECCCCcEEEeecCCCCCCCcCCCccCCCccccccccc
Q psy4832 276 DETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN--IRVVSPEGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQ 352 (770)
Q Consensus 276 ~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~--Ir~id~~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~ 352 (770)
. +++++ .+.||+++.+. |.+++.+|.-.+.+..+
T Consensus 149 ---------------~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----------------------- 185 (302)
T 3s25_A 149 ---------------L-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC----------------------- 185 (302)
T ss_dssp ---------------C-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-----------------------
T ss_pred ---------------c-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-----------------------
Confidence 0 12334 45699998744 99999887544433221
Q ss_pred CcceEEEeCCCCeEEEEe---CCEEEEEcCCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCC
Q psy4832 353 WPTGLALSPLDDSLHFID---DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGS 429 (770)
Q Consensus 353 ~P~gla~d~~~g~lyv~D---~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 429 (770)
+..+++.|..+.||+++ ..+|.+++.+|.-..+.-. ..+
T Consensus 186 -~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~-----------------------------------~~~-- 227 (302)
T 3s25_A 186 -NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTE-----------------------------------ANI-- 227 (302)
T ss_dssp -CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSC-----------------------------------SCE--
T ss_pred -CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeC-----------------------------------CCc--
Confidence 11234556578899998 3589999988753333310 011
Q ss_pred eeEEEEcCCC-CEEEEeCCCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEE
Q psy4832 430 LTALAFSPTG-DLYIADIDARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSV 508 (770)
Q Consensus 430 P~giavd~~G-~lyVaD~~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav 508 (770)
|. ++++| .||+++.... ..|.+++.+|.-....-.. ...+|++
T Consensus 228 ~~---~~~~g~~Iy~~~~~~~--~~i~~~~~DG~~r~~l~~~-------------------------------~~~~i~i 271 (302)
T 3s25_A 228 EH---YNVYGSLIFYQRGGDN--PALCVVKNDGTGFKELAKG-------------------------------EFCNINV 271 (302)
T ss_dssp EE---EEEETTEEEEEECSSS--CEEEEEETTSCCCEEEEES-------------------------------CEEEEEE
T ss_pred ce---EEECCCEEEEEECCCC--cEEEEEECCCCccEEeeCC-------------------------------ccceEEE
Confidence 22 55555 4998743322 3578888888632221000 1225666
Q ss_pred cCCCcEEEEcCCCceEEeee
Q psy4832 509 SPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 509 ~~dG~lyvaD~~~~~I~~i~ 528 (770)
. .+.||++|.....|.++.
T Consensus 272 ~-~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 272 T-SQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp C-SSEEEEEETTTCCEEEEE
T ss_pred e-CCEEEEEECCCCeEEEEE
Confidence 4 458999998887787764
No 114
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.63 E-value=1.8e-05 Score=83.04 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=84.9
Q ss_pred ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCC
Q psy4832 199 NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDE 277 (770)
Q Consensus 199 ~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~ 277 (770)
+.|+.++.. +++...+..+. ....|.+++++|.+..||++....+.|+.++. .++........+..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~------~~~~~~~~~~~~~~------ 77 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD-AGPTPMVPMVAPGGRIAYATVNKSESLVKIDL------VTGETLGRIDLSTP------ 77 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT-CTTCCCCEEECTTSSEEEEEETTTTEEEEEET------TTCCEEEEEECCBT------
T ss_pred CeEEEEECCCCcEEEEEEcCC-CCCCccceEEcCCCCEEEEEeCCCCeEEEEEC------CCCCeEeeEEcCCc------
Confidence 466677653 55555443211 00148999999855589999998899999953 23443322211100
Q ss_pred CCcCCCcccccccccCcceEEEccCC-cEEEEe-------------CCCeEEECCC-CcEEEeecCCCCCCCcCCCccCC
Q psy4832 278 TNCGDNGPALAAKLSHPKGLAIKADK-TMFIAD-------------GTNIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHR 342 (770)
Q Consensus 278 ~~~g~~g~~~~a~l~~P~gIavd~~G-~lYvaD-------------~~~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~ 342 (770)
+ ..-..|.+++++++| .||+++ ...|++++.+ +.+...+..+
T Consensus 78 -----~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~------------- 134 (337)
T 1pby_B 78 -----E-----ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP------------- 134 (337)
T ss_dssp -----T-----EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-------------
T ss_pred -----c-----cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-------------
Confidence 0 011258899999998 588885 2338888865 4443322211
Q ss_pred CcccccccccCcceEEEeCCCCe-EEEEeCCEEEEEcC-CCcEE
Q psy4832 343 SFPASTAQLQWPTGLALSPLDDS-LHFIDDRVIFKLTN-DLKVK 384 (770)
Q Consensus 343 ~~~~~~~~l~~P~gla~d~~~g~-lyv~D~~~I~~i~~-~G~v~ 384 (770)
..|.+++++| +|+ ||++ ++.|+.++. ++++.
T Consensus 135 ---------~~~~~~~~s~-dg~~l~~~-~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 135 ---------RQITMLAWAR-DGSKLYGL-GRDLHVMDPEAGTLV 167 (337)
T ss_dssp ---------SSCCCEEECT-TSSCEEEE-SSSEEEEETTTTEEE
T ss_pred ---------CCcceeEECC-CCCEEEEe-CCeEEEEECCCCcEe
Confidence 1478899999 765 8888 577888885 45544
No 115
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.57 E-value=5.3e-05 Score=76.14 Aligned_cols=205 Identities=15% Similarity=0.099 Sum_probs=124.2
Q ss_pred cccceeEEEEeCCCCcEEEEeCC--CcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceE
Q psy4832 220 QVSYQYYLALSPADGHLYISDAE--KHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGL 297 (770)
Q Consensus 220 ~~~~p~~lav~p~~g~lyvsd~~--~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gI 297 (770)
.-..-.||+++ ++.||++... ...|++++. .+|.+..-...+. -.+..||
T Consensus 19 ~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~------~tgkv~~~~~l~~--------------------~~fgeGi 70 (243)
T 3mbr_X 19 TTAFTEGLFYL--RGHLYESTGETGRSSVRKVDL------ETGRILQRAEVPP--------------------PYFGAGI 70 (243)
T ss_dssp TTCCEEEEEEE--TTEEEEEECCTTSCEEEEEET------TTCCEEEEEECCT--------------------TCCEEEE
T ss_pred CccccccEEEE--CCEEEEECCCCCCceEEEEEC------CCCCEEEEEeCCC--------------------CcceeEE
Confidence 34456799999 4899999765 468999963 3455443221111 1134678
Q ss_pred EEccCCcEEEEeCCC--eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCE
Q psy4832 298 AIKADKTMFIADGTN--IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRV 373 (770)
Q Consensus 298 avd~~G~lYvaD~~~--Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~ 373 (770)
+++ ++.||++.+.+ +.++|++ .++..-+..+. .+.||+.+ ++.||++| +++
T Consensus 71 ~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~----------------------~Gwglt~d--g~~L~vSdgs~~ 125 (243)
T 3mbr_X 71 VAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG----------------------EGWALTSD--DSHLYMSDGTAV 125 (243)
T ss_dssp EEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSS----------------------CCCEEEEC--SSCEEEECSSSE
T ss_pred EEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC----------------------CceEEeeC--CCEEEEECCCCe
Confidence 887 57899998765 9999964 44433232211 34577755 67899999 689
Q ss_pred EEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCcee
Q psy4832 374 IFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVN 452 (770)
Q Consensus 374 I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~ 452 (770)
|+.+|+. .++..-.-..... ..+..++.|... +|.||++.+..+.
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g-------------------------------~~~~~lNeLe~~-~G~lyanvw~s~~-- 171 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGG-------------------------------RPLDNLNELEWV-NGELLANVWLTSR-- 171 (243)
T ss_dssp EEEECTTTCCEEEEEECEETT-------------------------------EECCCEEEEEEE-TTEEEEEETTTTE--
T ss_pred EEEEeCCCCeEEEEEEEccCC-------------------------------cccccceeeEEe-CCEEEEEECCCCe--
Confidence 9999975 4433222111000 113445667654 7899999988764
Q ss_pred eEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCC-CcEEEEcCCCceEEeee
Q psy4832 453 ALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPD-GVVNVADQGSLHILALQ 528 (770)
Q Consensus 453 ~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~d-G~lyvaD~~~~~I~~i~ 528 (770)
|.+||+ +|++....-... +... ... .......-|.|||.+|+ +.|||+...=.+++.|.
T Consensus 172 -I~vIDp~tG~V~~~idl~~------------l~~~--~~~--~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 172 -IARIDPASGKVVAWIDLQA------------LVPD--ADA--LTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp -EEEECTTTCBEEEEEECGG------------GSTT--TTS--CCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred -EEEEECCCCCEEEEEECCc------------Cccc--ccc--ccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 788897 888765442210 0000 000 00112356999999995 47899876555665553
No 116
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=7.7e-05 Score=80.82 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=66.1
Q ss_pred EEECCCccEEeccc-CCC---eEEEEecc-CccCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeC----------
Q psy4832 135 LQKGDGSSLHLKHE-FPR---TVSVVMGT-GLQRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF---------- 198 (770)
Q Consensus 135 l~~~dG~~~~~~~~-~~~---~i~~v~g~-G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~---------- 198 (770)
+...|+..+|+.+. ... .|.++... ++.. . ..... ..| +|++.|||. |||++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~-------~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~ 95 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL--G-------HVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEE--E-------EecCC-CCC-CeEECCCCCEEEEEeccccccccCCC
Confidence 33467777788773 222 55666542 2211 0 00011 358 999999985 999862
Q ss_pred -ceEEEEcCC-CcEEEEeccC-ccc---ccceeEEEEeCCCCcEEEEeCC-CcEEEEEe
Q psy4832 199 -NLVRRLTPE-GNVFTVLQLS-ATQ---VSYQYYLALSPADGHLYISDAE-KHQILRVL 250 (770)
Q Consensus 199 -~~I~~i~~~-G~v~~~~~~~-~~~---~~~p~~lav~p~~g~lyvsd~~-~~~I~~i~ 250 (770)
+.|.+||.. +++...+..+ ... ...|.+++++|.+..||++... .+.|..|+
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 568899874 5555444322 111 2569999999977889999865 68898884
No 117
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.54 E-value=0.00013 Score=78.37 Aligned_cols=247 Identities=11% Similarity=0.085 Sum_probs=149.3
Q ss_pred cCCCeEEE-CCCccEEeccc-----CCCeEEEEec---------cCcc-CCccCCCCCcccccccccCceEEEEcCCCCE
Q psy4832 130 FHEGILQK-GDGSSLHLKHE-----FPRTVSVVMG---------TGLQ-RPLVCKDCDGVARDARLLTPVALTSGPDGSL 193 (770)
Q Consensus 130 ~~~gil~~-~dG~~~~~~~~-----~~~~i~~v~g---------~G~~-~~~~~~~~~g~~~~~~l~~P~~la~~~dG~l 193 (770)
.|.||.++ .+| ++|++-- -|..+..+.. ++.. .++++. .....|.+..++.+|+.|.|
T Consensus 27 ~P~gv~vd~~~g-RiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w-----~~~~~lvsV~~v~iD~~~rL 100 (381)
T 3q6k_A 27 ISTAFAYDAEGE-KLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGH-----KTGKELTSIYQPVIDDCRRL 100 (381)
T ss_dssp CCCEEEEETTTT-EEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTC-----SSSCSSSCEEEEEECTTCEE
T ss_pred ceeeeeeecCCC-cEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCC-----ccccceEEeeEEEEcCCCcE
Confidence 58899885 777 5888631 2345555542 2234 555542 12356999999999999999
Q ss_pred EEEeCc-----------------eEEEEcCC-C--cEEEEeccCcc---cccceeEEEEe---CC----CCcEEEEeCCC
Q psy4832 194 YVGDFN-----------------LVRRLTPE-G--NVFTVLQLSAT---QVSYQYYLALS---PA----DGHLYISDAEK 243 (770)
Q Consensus 194 yv~d~~-----------------~I~~i~~~-G--~v~~~~~~~~~---~~~~p~~lav~---p~----~g~lyvsd~~~ 243 (770)
||.|.+ +|..+|.. + ++...+..+.. .-+.-..|+|| |. ++.+||+|...
T Consensus 101 WVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~ 180 (381)
T 3q6k_A 101 WVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLR 180 (381)
T ss_dssp EEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTT
T ss_pred EEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCC
Confidence 999963 35667643 5 67666554321 23456789999 32 57899999998
Q ss_pred cEEEEEeccCCccCCCCcEEEEECCCccccCCCC-CCcCCCcccccccccCcceEEEccC----C-cEEEEeCCC--eEE
Q psy4832 244 HQILRVLSLESVADPSINWEVAVGSGERCIPGDE-TNCGDNGPALAAKLSHPKGLAIKAD----K-TMFIADGTN--IRV 315 (770)
Q Consensus 244 ~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~-~~~g~~g~~~~a~l~~P~gIavd~~----G-~lYvaD~~~--Ir~ 315 (770)
..|..++. .++....+..... .|-.. .+.- .|.... ....-.|||++++ + .||+..-.. ++.
T Consensus 181 ~gLIVydl------~~~~swRv~~~~~--~pd~~~~~~i-~G~~~~-~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~ 250 (381)
T 3q6k_A 181 GALFIYDH------KKQDSWNVTHPTF--KAERPTKFDY-GGKEYE-FKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYS 250 (381)
T ss_dssp TEEEEEET------TTTEEEEEECGGG--SCCSCEEEEE-TTEEEE-ECCCEEEEEECCCCTTSCCEEEEEESSCSEEEE
T ss_pred CcEEEEEC------CCCcEEEEccCCC--ccccCcceEE-CCEEeE-eccCceEEEecCCcCCCCeEEEEEECCCCcEEE
Confidence 88888864 2343333332110 01000 0000 010000 0125678999885 3 599987443 666
Q ss_pred ECC----CC----cEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCC-c--
Q psy4832 316 VSP----EG----IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDL-K-- 382 (770)
Q Consensus 316 id~----~G----~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G-~-- 382 (770)
+.. +. .+.. .|... ......++++|+.+|.||+++ .+.|.+.++++ .
T Consensus 251 V~T~~L~~~~~~~~v~~-~G~kg-------------------~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 251 VNTKELKQKGGKLNPEL-LGNRG-------------------KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLR 310 (381)
T ss_dssp EEHHHHSSTTCCCCCEE-EEECC-------------------TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBC
T ss_pred EEHHHhhCcchhhceEE-eeecC-------------------CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccc
Confidence 641 22 1211 11110 011234678874489999999 68999999876 2
Q ss_pred ---EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCC
Q psy4832 383 ---VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADID 447 (770)
Q Consensus 383 ---v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~ 447 (770)
+.+++ .+..|..|.+|+++.+|.|||....
T Consensus 311 ~~n~~~l~-----------------------------------~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 311 MKNTDVVY-----------------------------------TSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp GGGEEEEE-----------------------------------ECTTCCSEEEEEECTTSCEEEEECS
T ss_pred cCceEEEE-----------------------------------ECCCccccCeEEECCCCeEEEEECc
Confidence 34554 2235788999999999999998854
No 118
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.49 E-value=2.2e-05 Score=84.88 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=71.7
Q ss_pred cCCC-CEEEEeC------ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeC---------CCcEEEEEe
Q psy4832 188 GPDG-SLYVGDF------NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDA---------EKHQILRVL 250 (770)
Q Consensus 188 ~~dG-~lyv~d~------~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~---------~~~~I~~i~ 250 (770)
.|+| .+||+|. +.|.+||.+ +++...+..+ ..|. |+++|....|||+++ ..+.|..|+
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG----~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG----FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC----SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC----CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4666 5999986 389999965 6776655432 2365 999997778999984 245688885
Q ss_pred ccCCccCCCCcE-EEE-ECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC--CC-eEEECCC-CcEE
Q psy4832 251 SLESVADPSINW-EVA-VGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG--TN-IRVVSPE-GIIH 323 (770)
Q Consensus 251 ~~~~~~~~~g~~-~~v-aG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~--~~-Ir~id~~-G~i~ 323 (770)
.. ++.+ ..+ .+.|.+ . ..-..|.+++++++|. |||+.. .+ |.+||.. +++.
T Consensus 116 ~~------t~~v~~~I~v~~g~r------~----------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 116 PV------TLLPTADIELPDAPR------F----------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp TT------TCCEEEEEEETTCCC------C----------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CC------CCeEEEEEECCCccc------c----------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 32 2222 122 222111 0 0123699999999997 999974 34 8899854 5554
Q ss_pred Eee
Q psy4832 324 TLI 326 (770)
Q Consensus 324 t~~ 326 (770)
.-+
T Consensus 174 ~tI 176 (386)
T 3sjl_D 174 RML 176 (386)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 119
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.47 E-value=0.00029 Score=80.58 Aligned_cols=196 Identities=11% Similarity=0.007 Sum_probs=115.0
Q ss_pred EcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEE
Q psy4832 187 SGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWE 263 (770)
Q Consensus 187 ~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~ 263 (770)
.|+.+.+||+.. +.|..||.+ +++...+..+ ..|.+++++|.+..||+++. .+.|.+|+... .++.+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g----~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~----~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG----YAVHISRLSASGRYLFVIGR-DGKVNMIDLWM----KEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECS----SCEEEEEECTTSCEEEEEET-TSEEEEEETTS----SSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCC----CCccceEECCCCCEEEEEcC-CCeEEEEECCC----CCCcEe
Confidence 445667888876 699999865 6777655432 25889999996667999875 56899995310 123222
Q ss_pred EEECCCccccCCCCCCcCCCcccccccccCcceEEEc----cCCc-EEEEeCCC--eEEECCC-CcEEEeecCCCCC---
Q psy4832 264 VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIK----ADKT-MFIADGTN--IRVVSPE-GIIHTLIGHHKHH--- 332 (770)
Q Consensus 264 ~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd----~~G~-lYvaD~~~--Ir~id~~-G~i~t~~g~~~~~--- 332 (770)
.-.-.| ..|.+|+++ ++|. +|++.... |.++|.. .++...+..+...
T Consensus 234 ~~i~~G----------------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 234 AEIKIG----------------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp EEEECC----------------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred EEEecC----------------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 111111 148899999 5885 89887542 7888743 4444333322100
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEcCCC-cEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLTNDL-KVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~~~G-~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
..|.| -..+.+|..++ ++. ++|+- .+.|..++... ....+...+.
T Consensus 292 ~~~~p-------------~~rva~i~~s~-~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~----------------- 340 (567)
T 1qks_A 292 QEYHP-------------EPRVAAILASH-YRPEFIVNVKETGKILLVDYTDLNNLKTTEISA----------------- 340 (567)
T ss_dssp CCEES-------------CCCEEEEEECS-SSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-----------------
T ss_pred ccccC-------------CCceEEEEEcC-CCCEEEEEecCCCeEEEEecCCCccceeeeeec-----------------
Confidence 00000 01345677777 544 44443 57787777432 1111111000
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEE
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFD 465 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~ 465 (770)
-..|+++.++++|. +|++...+++ |..+|. ++++..
T Consensus 341 ------------------~~~~~d~~~~pdgr~~~va~~~sn~---V~ViD~~t~kl~~ 378 (567)
T 1qks_A 341 ------------------ERFLHDGGLDGSHRYFITAANARNK---LVVIDTKEGKLVA 378 (567)
T ss_dssp ------------------CSSEEEEEECTTSCEEEEEEGGGTE---EEEEETTTTEEEE
T ss_pred ------------------cccccCceECCCCCEEEEEeCCCCe---EEEEECCCCcEEE
Confidence 03488999999998 7888877765 667775 566543
No 120
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.47 E-value=0.0015 Score=81.99 Aligned_cols=193 Identities=7% Similarity=0.011 Sum_probs=103.7
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCC-CCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
...++++.|+|.++++-. +.|+.++. +|+....+. ..-.....++++|. ++.+.++-..++.|..++.
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~----- 730 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD---EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDL----- 730 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEET-----
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc---CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEEC-----
Confidence 457899999998666543 57888875 466665553 12334578888874 3345566666667776642
Q ss_pred CCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CC-eEEECCC-Cc-EEEeecCCCC
Q psy4832 257 DPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TN-IRVVSPE-GI-IHTLIGHHKH 331 (770)
Q Consensus 257 ~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~-Ir~id~~-G~-i~t~~g~~~~ 331 (770)
.++... .+.+. -.....+++.++|.+.++-+ .. |+..+.. +. +.++......
T Consensus 731 -~~~~~~~~~~~h----------------------~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~ 787 (1249)
T 3sfz_A 731 -NQKECRNTMFGH----------------------TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFF 787 (1249)
T ss_dssp -TSSSEEEEECCC----------------------SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC
T ss_pred -CCcchhheecCC----------------------CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccc
Confidence 122222 22111 11356788999888555543 33 7776642 32 2222211100
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEeCCEEEEEcC-CCcE-EEEecCCCCCCCCCCCCcccccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFIDDRVIFKLTN-DLKV-KIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D~~~I~~i~~-~G~v-~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
.. . .......-.....++++| +|. |.++..+.|..++. .+.. ..+.. +
T Consensus 788 ~~--------~-~~~~~~~~~~v~~~~~s~-dg~~l~~~~~~~v~~~d~~~~~~~~~~~~-~------------------ 838 (1249)
T 3sfz_A 788 LS--------S-EDPPEDVEVIVKCCSWSA-DGDKIIVAAKNKVLLFDIHTSGLLAEIHT-G------------------ 838 (1249)
T ss_dssp -----------------CCCCCBCCCCBCT-TSSEEEEEETTEEEEEETTTCCEEEEEEC-S------------------
T ss_pred cc--------c-CCccccccceEEEEEECC-CCCEEEEEcCCcEEEEEecCCCceeEEcC-C------------------
Confidence 00 0 000000112456788888 666 44455778888774 3332 22221 0
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCc
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARK 450 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~r 450 (770)
.-.....++++|+|.+.++-...+.
T Consensus 839 -----------------~~~~v~~~~~sp~~~~l~~~~~dg~ 863 (1249)
T 3sfz_A 839 -----------------HHSTIQYCDFSPYDHLAVIALSQYC 863 (1249)
T ss_dssp -----------------SSSCCCEEEECSSTTEEEEECSSSC
T ss_pred -----------------CCCceEEEEEcCCCCEEEEEeCCCe
Confidence 0123577899999987777766654
No 121
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.44 E-value=1e-05 Score=84.94 Aligned_cols=168 Identities=10% Similarity=0.158 Sum_probs=102.6
Q ss_pred CCCCEEEEeC---ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC-------------CcEEEEEecc
Q psy4832 189 PDGSLYVGDF---NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE-------------KHQILRVLSL 252 (770)
Q Consensus 189 ~dG~lyv~d~---~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~-------------~~~I~~i~~~ 252 (770)
.++-||++.. +.|.+++.+|...+.+.. ..+..|.++ ++.||+++.. .+.|++++
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-----~~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~-- 94 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-----DTAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIK-- 94 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-----EEEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEE--
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccC-----CceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEe--
Confidence 4778999874 699999999965554421 125667665 7899998764 36788884
Q ss_pred CCccCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEe---CCC--eEEECCCCcEE-E
Q psy4832 253 ESVADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIAD---GTN--IRVVSPEGIIH-T 324 (770)
Q Consensus 253 ~~~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD---~~~--Ir~id~~G~i~-t 324 (770)
.+|.- +.+. .-.+.++.+ .+.||++| ..+ |++++.+|.-. .
T Consensus 95 -----~dg~~~~~l~--------------------------~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~ 143 (302)
T 3s25_A 95 -----RNGHGSTVLD--------------------------PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKK 143 (302)
T ss_dssp -----TTSCCCEEEE--------------------------CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEE
T ss_pred -----CCCCcceEee--------------------------cCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEE
Confidence 33332 2222 111223333 45699998 344 99999887432 2
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCCCcEEEEecCCCCCCCCCCCCcc
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRD 402 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~ 402 (770)
+.... . +++++.++.||+++ ...|++++.+|.-......
T Consensus 144 lt~~~---------------------~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~------------- 184 (302)
T 3s25_A 144 IKNHY---------------------L-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD------------- 184 (302)
T ss_dssp EESSC---------------------C-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-------------
T ss_pred EeCCC---------------------c-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-------------
Confidence 32110 0 12344377899998 4789999987753332211
Q ss_pred ccccccccccccccCCcccccccccCCeeEEEEcCC-CCEEEEeCCCCceeeEEEEcCCCcE
Q psy4832 403 FKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPT-GDLYIADIDARKVNALRVIDSTGRM 463 (770)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i~~i~~~G~i 463 (770)
.+..+++.|+ +.||+++.... .+|.+++.+|.-
T Consensus 185 --------------------------~~~~~~~~P~g~~iy~t~~~~~--~~I~~~~ldG~~ 218 (302)
T 3s25_A 185 --------------------------CNCYKPVVLDDTNVYYMDVNRD--NAIVHVNINNPN 218 (302)
T ss_dssp --------------------------SCEEEEEEEETTEEEEEEGGGT--TEEEEECSSSCC
T ss_pred --------------------------CCccceeeecCCEEEEEEcCCC--cEEEEEECCCCC
Confidence 0122335564 56999998654 357888887753
No 122
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.43 E-value=7.2e-05 Score=80.64 Aligned_cols=70 Identities=13% Similarity=0.155 Sum_probs=51.1
Q ss_pred CceEEEEcCCCC-EEEEeC-----------ceEEEEcCC-CcEEEEeccCcc---cccceeEEEEeCCCCcEEEEeCC-C
Q psy4832 181 TPVALTSGPDGS-LYVGDF-----------NLVRRLTPE-GNVFTVLQLSAT---QVSYQYYLALSPADGHLYISDAE-K 243 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~-----------~~I~~i~~~-G~v~~~~~~~~~---~~~~p~~lav~p~~g~lyvsd~~-~ 243 (770)
.| .|+++|||. ||+++. +.|..++.. +++...+..... .-..|.+|+++|.+..||+++.. .
T Consensus 52 ~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 52 NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA 130 (361)
T ss_dssp EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC
Confidence 58 999999985 899862 468999864 566544432211 22579999999977789999875 6
Q ss_pred cEEEEEec
Q psy4832 244 HQILRVLS 251 (770)
Q Consensus 244 ~~I~~i~~ 251 (770)
+.|..++.
T Consensus 131 ~~v~v~d~ 138 (361)
T 2oiz_A 131 TSIGIVDV 138 (361)
T ss_dssp EEEEEEET
T ss_pred CeEEEEEC
Confidence 78888853
No 123
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.42 E-value=2.9e-05 Score=82.05 Aligned_cols=158 Identities=14% Similarity=0.124 Sum_probs=91.1
Q ss_pred CeEEECCCccEEecccCCCeEEEEecc-CccC-CccCCCCCcccccccccCceEEEEcCCCC-EEEEeC--ceEEEEcCC
Q psy4832 133 GILQKGDGSSLHLKHEFPRTVSVVMGT-GLQR-PLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDF--NLVRRLTPE 207 (770)
Q Consensus 133 gil~~~dG~~~~~~~~~~~~i~~v~g~-G~~~-~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~--~~I~~i~~~ 207 (770)
|+....++ .++++....+.|.++... |... .+. ......|.+++++|+|. +|++.. +.|.+++.+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~~~~---------~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~ 73 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYKSCV---------MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 73 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEEEEE---------CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEEEEEe---------cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC
Confidence 44333444 456655466777777642 2211 010 01112588999999997 788875 589999865
Q ss_pred -CcEEEEeccCcc---cccceeEEEEeCCCCcEEEEeCC-----------CcEEEEEeccCCccCCCCcEEEEECCCccc
Q psy4832 208 -GNVFTVLQLSAT---QVSYQYYLALSPADGHLYISDAE-----------KHQILRVLSLESVADPSINWEVAVGSGERC 272 (770)
Q Consensus 208 -G~v~~~~~~~~~---~~~~p~~lav~p~~g~lyvsd~~-----------~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~ 272 (770)
++....+..... ....|.+++++|.+..||++... .+.|+.++..... ....+....
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~------ 145 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL--EAKPVRTFP------ 145 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG--GBCCSEEEE------
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc--ccceeeecc------
Confidence 666554432111 03447899999866678888744 4677777432100 000000000
Q ss_pred cCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCCeEEECC-CCcEEEee
Q psy4832 273 IPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTNIRVVSP-EGIIHTLI 326 (770)
Q Consensus 273 ~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~Ir~id~-~G~i~t~~ 326 (770)
.-..+.+++++++|.||+++. .|+.+|. +|.+...+
T Consensus 146 -----------------~~~~~~~~~~s~dg~l~~~~~-~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 146 -----------------MPRQVYLMRAADDGSLYVAGP-DIYKMDVKTGKYTVAL 182 (349)
T ss_dssp -----------------CCSSCCCEEECTTSCEEEESS-SEEEECTTTCCEEEEE
T ss_pred -----------------CCCcccceeECCCCcEEEccC-cEEEEeCCCCceeccc
Confidence 011467889999999888643 3999986 46655444
No 124
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.40 E-value=0.0099 Score=70.89 Aligned_cols=239 Identities=9% Similarity=0.092 Sum_probs=141.5
Q ss_pred ceEEEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccc-eeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCC
Q psy4832 182 PVALTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSY-QYYLALSPADGHLYISDAEKHQILRVLSLESVADPSI 260 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~-p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g 260 (770)
...|+.+++|.|||+..+.|.++++.......+... ..... ...|..++ ++.|||.... +.|++++. .++
T Consensus 133 i~~i~~d~~g~lwi~t~~gl~~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~-~g~lwigt~~-~Gl~~~~~------~~~ 203 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTPEGLIMFDIKESKFIDDSFS-TAMHKTIASTLYRQ-GDQIYIGTST-DGLYTYSI------TQK 203 (795)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEETTTTEEECSSSC-HHHHTCCEEEEEEE-TTEEEEEESS-SCEEEEET------TTC
T ss_pred EEEEEECCCCCEEEEECCceEEEECCCCEEEeccCC-CCCCcceEEEEECC-CCCEEEEECC-CCEEEEeC------CCC
Confidence 567899999999999888899998754333222110 01112 56788885 8999997653 35788842 123
Q ss_pred cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-CeEEECCCC-cEEEeecCCCCCCCcCCC
Q psy4832 261 NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-NIRVVSPEG-IIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 261 ~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~Ir~id~~G-~i~t~~g~~~~~~~~~p~ 338 (770)
.+..+... . .-.....|..|++|.|||+... .|.++++.. .+..+.-.....
T Consensus 204 ~~~~~~~~----------~----------~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~------ 257 (795)
T 4a2l_A 204 TFEKVIPI----------L----------GTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNP------ 257 (795)
T ss_dssp CEEECC------------------------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCT------
T ss_pred eEEEecCC----------C----------CCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCc------
Confidence 33222100 0 0123567888999999998754 388898764 455443211000
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEeCCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccC
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQD 417 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (770)
. ...-.....|+.|+ +|.|||+..+-|.++++. +.+..+.-.+.....
T Consensus 258 ---~-----~l~~~~i~~i~~d~-~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~---------------------- 306 (795)
T 4a2l_A 258 ---K-----SISSNYIRSLAMDS-QNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGS---------------------- 306 (795)
T ss_dssp ---T-----SCSCSBEEEEEECT-TSCEEEEESSCEEEEETTTTEEEEECCCTTSTTS----------------------
T ss_pred ---c-----ccCCCeEEEEEEcC-CCCEEEEeCChhheEcCCCCeEEEEecCCCCCCC----------------------
Confidence 0 00112356889998 999999876688999865 455544321111000
Q ss_pred CcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-CcEEEeecCccCCCCCcCCCCCcccccCccCccccc
Q psy4832 418 DSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTS 496 (770)
Q Consensus 418 ~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 496 (770)
-.-.....|..|++|+|||+-..+. |..+++. +.+..+.-... ...+
T Consensus 307 -------l~~~~i~~i~~D~~g~lWigt~~~G----l~~~~~~~~~~~~~~~~~~-------------------~~~l-- 354 (795)
T 4a2l_A 307 -------LSQRSVRSIFMDSQGGMWLGTYFGG----LNYYHPIRNRFKNIRNIPY-------------------KNSL-- 354 (795)
T ss_dssp -------CSSSCEEEEEECTTSCEEEEESSSC----EEEECGGGGSSEEECCCTT-------------------SSSC--
T ss_pred -------CCCCcEEEEEEeCCcCEEEEECCCC----eEEeCCCcccceEEcCCCC-------------------CCCC--
Confidence 0013468899999999999987654 5666653 33433321110 0000
Q ss_pred ceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 497 TARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 497 ~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
.-+...+|+.+++|.|||+..+
T Consensus 355 --~~~~V~~i~~d~~g~lWiGt~~ 376 (795)
T 4a2l_A 355 --SDNVVSCIVEDKDKNLWIGTND 376 (795)
T ss_dssp --SCSSEEEEEECTTSCEEEEESS
T ss_pred --CCCeeEEEEECCCCCEEEEECC
Confidence 1134678999999999998654
No 125
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00029 Score=84.13 Aligned_cols=241 Identities=6% Similarity=0.114 Sum_probs=148.8
Q ss_pred CceEEEEcCCCCEEEEeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 181 TPVALTSGPDGSLYVGDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
...+|+.|++|.|||+.. +.|.++++. +++..+. ...........|+.++ +|.|||+.. +.|.+++..
T Consensus 408 ~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~------ 477 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIE-LEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLA------ 477 (781)
T ss_dssp BEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECC-STTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESS------
T ss_pred ceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEec-cCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCC------
Confidence 467899999999999987 689999876 4444432 1111224567888885 899999986 578888532
Q ss_pred CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-CeEEECCCC-cEEEeecCCCCCCCcC
Q psy4832 259 SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-NIRVVSPEG-IIHTLIGHHKHHNIWS 336 (770)
Q Consensus 259 ~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~Ir~id~~G-~i~t~~g~~~~~~~~~ 336 (770)
++.+..+..... . ......+..|+.|++|+|||+-.. .|.+++++. .+..+.....
T Consensus 478 ~~~~~~~~~~~~------------~----~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~------ 535 (781)
T 3v9f_A 478 SKKVIHHYDTSN------------S----QLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEG------ 535 (781)
T ss_dssp SSSCCEEECTTT------------S----SCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTT------
T ss_pred CCeEEecccCcc------------c----ccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCC------
Confidence 233333321100 0 000235678999999999999864 499999764 4544332110
Q ss_pred CCccCCCcccccccccCcceEEEeCCCCeEEEEeCCEE-EEEcCC-CcEEEEecCCCCCCCCCCCCcccccccccccccc
Q psy4832 337 PFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVI-FKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKST 414 (770)
Q Consensus 337 p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I-~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (770)
. .-....+|+.|+ +|.||++..+-+ .++++. +++..+.-. ..
T Consensus 536 -------l-----~~~~i~~i~~d~-~g~lWi~T~~Glv~~~d~~~~~~~~~~~~--~g--------------------- 579 (781)
T 3v9f_A 536 -------F-----CSNTINQIYRSS-KGQMWLATGEGLVCFPSARNFDYQVFQRK--EG--------------------- 579 (781)
T ss_dssp -------C-----SCSCEEEEEECT-TSCEEEEETTEEEEESCTTTCCCEEECGG--GT---------------------
T ss_pred -------C-----CCCeeEEEEECC-CCCEEEEECCCceEEECCCCCcEEEcccc--CC---------------------
Confidence 0 112456889998 999999987666 898865 444433210 00
Q ss_pred ccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-CcEEEeecCccCCCCCcCCCCCcccccCccCcc
Q psy4832 415 VQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETL 493 (770)
Q Consensus 415 ~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~ 493 (770)
+ .-....+|+.|++|+||++... -|.++++. +++..+- .. ++.
T Consensus 580 ------l----~~~~i~~i~~d~~g~lW~~t~~-----Gl~~~~~~~~~~~~~~-~~--------------------dGl 623 (781)
T 3v9f_A 580 ------L----PNTHIRAISEDKNGNIWASTNT-----GISCYITSKKCFYTYD-HS--------------------NNI 623 (781)
T ss_dssp ------C----SCCCCCEEEECSSSCEEEECSS-----CEEEEETTTTEEEEEC-GG--------------------GTC
T ss_pred ------C----CCceEEEEEECCCCCEEEEcCC-----ceEEEECCCCceEEec-cc--------------------CCc
Confidence 0 0012478999999999999643 26677775 4444432 11 111
Q ss_pred cccceecCCeeEEEEcCCCcEEEEcCCCceEEeeecC
Q psy4832 494 LTSTARFTSISALSVSPDGVVNVADQGSLHILALQHY 530 (770)
Q Consensus 494 ~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~~~ 530 (770)
.... | .+.+++.+++|.||+.-... +..+.+.
T Consensus 624 ~~~~--f-~~~~~~~~~~G~l~~g~~~G--l~~f~p~ 655 (781)
T 3v9f_A 624 PQGS--F-ISGCVTKDHNGLIYFGSING--LCFFNPD 655 (781)
T ss_dssp CSSC--E-EEEEEEECTTSCEEEEETTE--EEEECSC
T ss_pred cccc--c-ccCceEECCCCEEEEECCCc--eEEEChh
Confidence 1111 1 24578889999999987543 5566554
No 126
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.36 E-value=0.00031 Score=76.00 Aligned_cols=110 Identities=13% Similarity=0.034 Sum_probs=68.9
Q ss_pred cCCCeEEECCCccEEecccC---------CCeEEEEecc-CccC-CccCCCCCcccccccccCceEEEEcCCCC-EEEEe
Q psy4832 130 FHEGILQKGDGSSLHLKHEF---------PRTVSVVMGT-GLQR-PLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGD 197 (770)
Q Consensus 130 ~~~gil~~~dG~~~~~~~~~---------~~~i~~v~g~-G~~~-~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d 197 (770)
.| ++...+||..+|+++.. ...|.++... ++.. .+. ..+.........|.+++++|||. |||+.
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~---~~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE---LPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE---CCCccccccCCCccceEECCCCCEEEEEe
Confidence 35 89999999999998631 3567777542 2211 111 11000000124699999999986 88886
Q ss_pred C---ceEEEEcCCCcEEEE-eccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 198 F---NLVRRLTPEGNVFTV-LQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 198 ~---~~I~~i~~~G~v~~~-~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
. +.|..||.++++... +.. |..+.+.|.....|++...++++..++
T Consensus 144 ~~~~~~v~viD~t~~~~~~~i~~-------~~~~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 144 FAAGPAVGLVVQGGSSDDQLLSS-------PTCYHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred cCCCCeEEEEECCCCEEeEEcCC-------CceEEEEeCCCceEEEEcCCCCEEEEE
Confidence 3 579999834666544 432 333556666678888888888888884
No 127
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.35 E-value=0.013 Score=69.98 Aligned_cols=321 Identities=10% Similarity=0.069 Sum_probs=178.2
Q ss_pred CCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccc--cCceEEEEcCCCCEEEEeCceEEEEcCC-C
Q psy4832 132 EGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARL--LTPVALTSGPDGSLYVGDFNLVRRLTPE-G 208 (770)
Q Consensus 132 ~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l--~~P~~la~~~dG~lyv~d~~~I~~i~~~-G 208 (770)
..|+++.+| .+|+.. ..-+..+.|.- ...+.....+ ...| ..-.+|+.|++|.|||+..+.+.++++. +
T Consensus 46 ~~I~qD~~G-~lWigT--~~GL~ryDG~~-f~~~~~~~~~----~~~l~~n~I~~i~~d~~g~lWigT~~Gl~~yd~~~~ 117 (795)
T 4a2l_A 46 FSIDQDKRG-NMWFAT--YDGVNKYDGYA-FTVYQHNEDD----PNSIANDISRIVKTDSQGRVWIGTRDGLSRYDEEKD 117 (795)
T ss_dssp EEEEECTTS-CEEEEE--TTEEEEECSSC-EEEECCCTTC----TTSCSCSCEEEEEECTTSCEEEEESSCEEEEETTTT
T ss_pred EEEEEcCCC-CEEEee--cCcCcccCCCc-eEEEeCCCCC----CCcccccceeEEEECCCCCEEEEeCCchheeCCCCC
Confidence 357778888 466663 33456666531 1222111001 1112 3457899999999999988889999875 4
Q ss_pred cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCccccc
Q psy4832 209 NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALA 288 (770)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~ 288 (770)
++..+.............|+.++ +|.|||+.. +.|++++.. ++.+..+.. +
T Consensus 118 ~f~~~~~~~~~~~~~i~~i~~d~-~g~lwi~t~--~gl~~~~~~------~~~~~~~~~---------------~----- 168 (795)
T 4a2l_A 118 IFQNFFYEKNGKHLQVNGIEEIS-PEQLLISTP--EGLIMFDIK------ESKFIDDSF---------------S----- 168 (795)
T ss_dssp EEEEECCEETTEECCCCEEEEEE-TTEEEEEET--TEEEEEETT------TTEEECSSS---------------C-----
T ss_pred eEEeccccccCCCceEEEEEECC-CCCEEEEEC--CceEEEECC------CCEEEeccC---------------C-----
Confidence 55444321111111156788884 899999876 568888521 222211100 0
Q ss_pred ccccC-cceEEEccCCcEEEEeCC-CeEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe
Q psy4832 289 AKLSH-PKGLAIKADKTMFIADGT-NIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS 365 (770)
Q Consensus 289 a~l~~-P~gIavd~~G~lYvaD~~-~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~ 365 (770)
..... ...|..|++|.|||+... .|.++++. +.+..+.... .-.....|..++ +|.
T Consensus 169 ~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~--------------------~~~~i~~i~~d~-~g~ 227 (795)
T 4a2l_A 169 TAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPIL--------------------GTKQIQAILQQS-PTR 227 (795)
T ss_dssp HHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC------------------------CCCEEEEEEEE-TTE
T ss_pred CCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCC--------------------CCCeeEEEEEcC-CCC
Confidence 00112 567889999999998754 48888854 4554432110 012356788888 899
Q ss_pred EEEEe-CCEEEEEcCCC-cEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEE
Q psy4832 366 LHFID-DRVIFKLTNDL-KVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYI 443 (770)
Q Consensus 366 lyv~D-~~~I~~i~~~G-~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyV 443 (770)
|||+. .+.|+++++.. ++..+.-.+..... -.-.....|+.|++|.|||
T Consensus 228 lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~-----------------------------l~~~~i~~i~~d~~g~lWi 278 (795)
T 4a2l_A 228 IWVATEGAGLFLINPKTKEIKNYLHSPSNPKS-----------------------------ISSNYIRSLAMDSQNRLWI 278 (795)
T ss_dssp EEEEEBSSCEEEEETTTTEEEEECCCTTCTTS-----------------------------CSCSBEEEEEECTTSCEEE
T ss_pred EEEEECCCCeEEEeCCCCeEEEeecCCCCccc-----------------------------cCCCeEEEEEEcCCCCEEE
Confidence 99986 56799999654 45444311100000 0013468899999999999
Q ss_pred EeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCc
Q psy4832 444 ADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSL 522 (770)
Q Consensus 444 aD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~ 522 (770)
+... . +..+++ .+.+..+.-.... ...+ .-+...+|..|++|.|||+..+++
T Consensus 279 gt~~-G----l~~~~~~~~~~~~~~~~~~~------------------~~~l----~~~~i~~i~~D~~g~lWigt~~~G 331 (795)
T 4a2l_A 279 GTFN-D----LNIYHEGTDSFASYSSNPVE------------------NGSL----SQRSVRSIFMDSQGGMWLGTYFGG 331 (795)
T ss_dssp EESS-C----EEEEETTTTEEEEECCCTTS------------------TTSC----SSSCEEEEEECTTSCEEEEESSSC
T ss_pred EeCC-h----hheEcCCCCeEEEEecCCCC------------------CCCC----CCCcEEEEEEeCCcCEEEEECCCC
Confidence 8764 3 566665 4555444321100 0000 113477899999999999875432
Q ss_pred eEEeeecCCc------------ccCCCCcEEEeCCCCCcEEEEecCCceEEEEcCCCC
Q psy4832 523 HILALQHYLP------------THDEHGEFKIPYPATNEIYVFNRYGQHITTRDMTSG 568 (770)
Q Consensus 523 ~I~~i~~~~~------------~~~~~g~~~i~~~~~~e~yvfd~~G~~~~t~d~~tg 568 (770)
|.++..... .........+..+..+.+|+-...+ -+...+..++
T Consensus 332 -l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~-Gl~~~~~~~~ 387 (795)
T 4a2l_A 332 -LNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDG-GLNLYNPITQ 387 (795)
T ss_dssp -EEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSS-CEEEECTTTC
T ss_pred -eEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCC-CeEEEcCCCC
Confidence 333332111 0011123445555566777765432 2444554443
No 128
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.31 E-value=9.9e-05 Score=81.03 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=67.3
Q ss_pred CCcEEEEeCCC----cEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEE
Q psy4832 233 DGHLYISDAEK----HQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFI 307 (770)
Q Consensus 233 ~g~lyvsd~~~----~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYv 307 (770)
...+||++... +.|.+|+. .++.+....-.| ..| +|+++++|. |||
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~------~t~~vv~~I~vG----------------------~~P-gia~SpDgk~lyV 134 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDG------STGRILGMTDGG----------------------FLP-HPVAAEDGSFFAQ 134 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEET------TTTEEEEEEEEC----------------------SSC-EEEECTTSSCEEE
T ss_pred CCEEEEECCCcCCCCCeEEEEEC------CCCEEEEEEECC----------------------CCC-ceEECCCCCEEEE
Confidence 46799999865 78999953 223322211111 158 999999886 999
Q ss_pred EeC----------CC-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe---C
Q psy4832 308 ADG----------TN-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID---D 371 (770)
Q Consensus 308 aD~----------~~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D---~ 371 (770)
++. .+ |.+||.. +++..-+..+... .......|.+++++| +| .|||++ .
T Consensus 135 an~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~--------------r~~~g~~P~~~~~sp-DGk~lyV~n~~~~ 199 (426)
T 3c75_H 135 ASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP--------------RFLVGTYQWMNALTP-DNKNLLFYQFSPA 199 (426)
T ss_dssp EEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC--------------CCCBSCCGGGSEECT-TSSEEEEEECSSS
T ss_pred EeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc--------------ccccCCCcceEEEcC-CCCEEEEEecCCC
Confidence 974 23 8999964 5543322111000 000124699999999 65 699987 4
Q ss_pred CEEEEEcC-CCcEE
Q psy4832 372 RVIFKLTN-DLKVK 384 (770)
Q Consensus 372 ~~I~~i~~-~G~v~ 384 (770)
+.|..||. .+++.
T Consensus 200 ~~VsVID~~t~kvv 213 (426)
T 3c75_H 200 PAVGVVDLEGKTFD 213 (426)
T ss_dssp CEEEEEETTTTEEE
T ss_pred CeEEEEECCCCeEE
Confidence 78999995 45543
No 129
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.28 E-value=0.00038 Score=74.72 Aligned_cols=246 Identities=11% Similarity=0.120 Sum_probs=143.6
Q ss_pred cCceEEEEc-CCCCEEEEeC-------ceEEEEcC---------CCcEEEEecc--CcccccceeEEEEeCCCCcEEEEe
Q psy4832 180 LTPVALTSG-PDGSLYVGDF-------NLVRRLTP---------EGNVFTVLQL--SATQVSYQYYLALSPADGHLYISD 240 (770)
Q Consensus 180 ~~P~~la~~-~dG~lyv~d~-------~~I~~i~~---------~G~v~~~~~~--~~~~~~~p~~lav~p~~g~lyvsd 240 (770)
.-|.+|++| .+|.|||+=. ..+-.++. ++.+..-+.. ....+...+++.+|+ .+.|||.|
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVLD 104 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVVD 104 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECT-TCEEEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcC-CCcEEEEe
Confidence 358999995 8999999753 13444432 2233122221 245688899999995 99999999
Q ss_pred CCC---------------cEEEEEeccCCccCCCC-cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEc-c--
Q psy4832 241 AEK---------------HQILRVLSLESVADPSI-NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIK-A-- 301 (770)
Q Consensus 241 ~~~---------------~~I~~i~~~~~~~~~~g-~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd-~-- 301 (770)
++. -+|..++.. .++ .+....-.... .+.. -.....|+|| .
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~-----t~~~~li~~y~~p~~-------------~~~~--~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLK-----QPNYPEVVRYYFPTR-------------LVEK--PTYFGGFAVDVANP 164 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESS-----STTCCEEEEEECCGG-------------GCCC--GGGEEEEEEEESCT
T ss_pred CCCcCcCCCccccCCCCCceEEEEECC-----CCCceeEEEEECCHH-------------hccc--CCccceEEEecccC
Confidence 872 145555431 110 22211111110 0000 1245689998 2
Q ss_pred -----CCcEEEEeCCC--eEEECC-CCcEEEeecCCCCCCCcCCCccCCCcccccccc---cCcceEEEeCC----CCeE
Q psy4832 302 -----DKTMFIADGTN--IRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQL---QWPTGLALSPL----DDSL 366 (770)
Q Consensus 302 -----~G~lYvaD~~~--Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l---~~P~gla~d~~----~g~l 366 (770)
++.+||+|... |.++|. +|+...+... ++.|... .........| ..-.|||++|. ...|
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~-----~~~pd~~-~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP-----TFKAERP-TKFDYGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG-----GGSCCSC-EEEEETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC-----CCccccC-cceEECCEEeEeccCceEEEecCCcCCCCeEE
Confidence 45699999766 888884 4666666521 1233200 0001111122 24578999984 3469
Q ss_pred EEEe--CCEEEEEcC----CCc----EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEc
Q psy4832 367 HFID--DRVIFKLTN----DLK----VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFS 436 (770)
Q Consensus 367 yv~D--~~~I~~i~~----~G~----v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd 436 (770)
|+.- +.++++|.. +.. ++.+ | .........++++|
T Consensus 239 Yf~plss~~ly~V~T~~L~~~~~~~~v~~~-G----------------------------------~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 239 YYLAGSAIKVYSVNTKELKQKGGKLNPELL-G----------------------------------NRGKYNDAIALAYD 283 (381)
T ss_dssp EEEESSCSEEEEEEHHHHSSTTCCCCCEEE-E----------------------------------ECCTTCCEEEEEEC
T ss_pred EEEECCCCcEEEEEHHHhhCcchhhceEEe-e----------------------------------ecCCCCCcceEEEe
Confidence 9987 568888862 221 1111 1 00001234578887
Q ss_pred -CCCCEEEEeCCCCceeeEEEEcCCC------cEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEc
Q psy4832 437 -PTGDLYIADIDARKVNALRVIDSTG------RMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVS 509 (770)
Q Consensus 437 -~~G~lyVaD~~~~ri~~i~~i~~~G------~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~ 509 (770)
.+|.||+++...+. |...++++ .+.+++ ...+|..|.+++++
T Consensus 284 ~~~G~ly~~~~~~~a---I~~w~~~~~~~~~~n~~~l~----------------------------~d~~l~~pd~~~i~ 332 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQ---VSCWNTQKMPLRMKNTDVVY----------------------------TSSRFVFGTDISVD 332 (381)
T ss_dssp TTTCEEEEEESSSSE---EEEEETTSCSBCGGGEEEEE----------------------------ECTTCCSEEEEEEC
T ss_pred CCCCeEEEEeccCCe---EEEEeCCCCccccCceEEEE----------------------------ECCCccccCeEEEC
Confidence 78999999998875 66667765 234443 12268889999999
Q ss_pred CCCcEEEEc
Q psy4832 510 PDGVVNVAD 518 (770)
Q Consensus 510 ~dG~lyvaD 518 (770)
++|.||+..
T Consensus 333 ~~g~Lwv~s 341 (381)
T 3q6k_A 333 SKGGLWFMS 341 (381)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEE
Confidence 999999975
No 130
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.26 E-value=0.00011 Score=79.33 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=50.3
Q ss_pred CceEEEEcCCC-CEEEEe-----------CceEEEEcCC-CcEEEEeccC-ccc---ccceeEEEEeCCCCcEEEEeCC-
Q psy4832 181 TPVALTSGPDG-SLYVGD-----------FNLVRRLTPE-GNVFTVLQLS-ATQ---VSYQYYLALSPADGHLYISDAE- 242 (770)
Q Consensus 181 ~P~~la~~~dG-~lyv~d-----------~~~I~~i~~~-G~v~~~~~~~-~~~---~~~p~~lav~p~~g~lyvsd~~- 242 (770)
.| +++++||| .|||++ .+.|.+||+. +++...+..+ ... ...|.+++++|.+..|||++..
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 48 89999988 599997 3689999964 6776555432 111 2579999999977799999875
Q ss_pred CcEEEE
Q psy4832 243 KHQILR 248 (770)
Q Consensus 243 ~~~I~~ 248 (770)
.+.|..
T Consensus 146 ~~~v~V 151 (368)
T 1mda_H 146 SAAAGL 151 (368)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 566776
No 131
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.26 E-value=0.0031 Score=67.91 Aligned_cols=295 Identities=13% Similarity=-0.015 Sum_probs=149.0
Q ss_pred ceeeeeecCCCeEEECCCc-cEEecccCCCeEEEEec-----cCcc-------CCccCCCCCcccccccccCceEEEEcC
Q psy4832 123 DVHHHYNFHEGILQKGDGS-SLHLKHEFPRTVSVVMG-----TGLQ-------RPLVCKDCDGVARDARLLTPVALTSGP 189 (770)
Q Consensus 123 ~~~~~~~~~~gil~~~dG~-~~~~~~~~~~~i~~v~g-----~G~~-------~~~~~~~~~g~~~~~~l~~P~~la~~~ 189 (770)
..|.+.+....+...++|. .+.... ..+.|....- +|.. ..+.............-.....+++.|
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGE-KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEE-TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred eeeeccCceEEEEECCCCCcEEEEec-CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence 3455667777888888887 555544 6666666543 2221 001000000000001122568899999
Q ss_pred CCCEEEE-eC-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEEC
Q psy4832 190 DGSLYVG-DF-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVG 267 (770)
Q Consensus 190 dG~lyv~-d~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG 267 (770)
+|.++++ .. +.|+.++.+++....+. ........++++| ++..+++-..++.|..++. .++.......
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~------~~~~~~~~~~ 188 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTGALLNVLN---FHRAPIVSVKWNK-DGTHIISMDVENVTILWNV------ISGTVMQHFE 188 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEEEEEC---CCCSCEEEEEECT-TSSEEEEEETTCCEEEEET------TTTEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeecc---CCCccEEEEEECC-CCCEEEEEecCCeEEEEEC------CCCcEEEEee
Confidence 9986654 33 47888888888776653 2334568899998 5554444444566766642 1233222221
Q ss_pred CCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCCC-c-EEEeecCCCCCCCcCCCccCCCc
Q psy4832 268 SGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPEG-I-IHTLIGHHKHHNIWSPFNCHRSF 344 (770)
Q Consensus 268 ~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~G-~-i~t~~g~~~~~~~~~p~~~~~~~ 344 (770)
.... + ... -........-.....+++.+++.++++.... |+.++... . +..+.+.
T Consensus 189 ~~~~--~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~---------------- 246 (425)
T 1r5m_A 189 LKET--G---GSS-INAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH---------------- 246 (425)
T ss_dssp CC---------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCC----------------
T ss_pred cccc--C---ccc-eeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccC----------------
Confidence 1100 0 000 0000000001125677887777766665444 77776432 1 2222111
Q ss_pred ccccccccCcceEEEeCCCCeEEE-Ee-CCEEEEEcCC-Cc-EEEEecCCCCCCCCCCCCccccccccccccccccCCcc
Q psy4832 345 PASTAQLQWPTGLALSPLDDSLHF-ID-DRVIFKLTND-LK-VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSV 420 (770)
Q Consensus 345 ~~~~~~l~~P~gla~d~~~g~lyv-~D-~~~I~~i~~~-G~-v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (770)
-.....++++| ++.+++ +. ++.|+.++.. ++ +..+.+
T Consensus 247 ------~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------------------------- 287 (425)
T 1r5m_A 247 ------HGPISVLEFND-TNKLLLSASDDGTLRIWHGGNGNSQNCFYG-------------------------------- 287 (425)
T ss_dssp ------SSCEEEEEEET-TTTEEEEEETTSCEEEECSSSBSCSEEECC--------------------------------
T ss_pred ------CCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCccceEecC--------------------------------
Confidence 12356799998 665444 43 4667666632 22 111111
Q ss_pred cccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccCccCccccccee
Q psy4832 421 RASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTAR 499 (770)
Q Consensus 421 ~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 499 (770)
.-.....++++++| ++++-...+. |+..+. +++.....-..
T Consensus 288 -----~~~~i~~~~~~~~~-~l~~~~~d~~---i~i~d~~~~~~~~~~~~~----------------------------- 329 (425)
T 1r5m_A 288 -----HSQSIVSASWVGDD-KVISCSMDGS---VRLWSLKQNTLLALSIVD----------------------------- 329 (425)
T ss_dssp -----CSSCEEEEEEETTT-EEEEEETTSE---EEEEETTTTEEEEEEECT-----------------------------
T ss_pred -----CCccEEEEEECCCC-EEEEEeCCCc---EEEEECCCCcEeEecccC-----------------------------
Confidence 01236889999998 5555555443 566664 44432221100
Q ss_pred cCCeeEEEEcCCCcEEEEcCCCceEEee
Q psy4832 500 FTSISALSVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 500 l~~P~giav~~dG~lyvaD~~~~~I~~i 527 (770)
-..+..++++|+|.++++-..++.|+..
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 1236789999999877765444444444
No 132
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=0.02 Score=68.10 Aligned_cols=256 Identities=12% Similarity=0.134 Sum_probs=137.7
Q ss_pred CceEEEEcC--CCCEEEEe-CceEEEEcCC-CcEEEEeccCc--ccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 181 TPVALTSGP--DGSLYVGD-FNLVRRLTPE-GNVFTVLQLSA--TQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 181 ~P~~la~~~--dG~lyv~d-~~~I~~i~~~-G~v~~~~~~~~--~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
....|+.|. +|.|||+. .+.|.++++. +++..+..... ........|+.++ +|.|||+... +.+++++.
T Consensus 116 ~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lwigt~~-~Gl~~~~~--- 190 (781)
T 3v9f_A 116 DVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAE-DGKLYIGHVE-GGLSILSL--- 190 (781)
T ss_dssp CEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEE-TTEEEEEETT-TEEEEEET---
T ss_pred cceEEEecCccCCCEEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECC-CCCEEEEecC-CCeEEEcC---
Confidence 457889999 99999998 5689999875 44444321100 0112346788884 8999998654 36888842
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCCeEEECCC-CcEEEeecCCCCCC
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTNIRVVSPE-GIIHTLIGHHKHHN 333 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~Ir~id~~-G~i~t~~g~~~~~~ 333 (770)
..+.+..+.-.... . . ...-.....|..|++|+|||+....|.++++. +.+..+.......
T Consensus 191 ---~~~~~~~~~~~~~~-------~---~----~l~~~~i~~i~~d~~g~lwigt~~Gl~~~d~~~~~~~~~~~~~~~~- 252 (781)
T 3v9f_A 191 ---NDKSVKHFVHDPQN-------P---N----SLPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNFHNNPGNI- 252 (781)
T ss_dssp ---TTTEEEEECC----------------------CCSSEEEEEECTTCCEEEEETTEEEEEETTTTEEEC---------
T ss_pred ---CCCceEeeecCCCC-------c---c----cCCCCceeEEEEcCCCCEEEEeCCcHheECCCCCcEEEEEcCCCcc-
Confidence 12233332110000 0 0 00012356889999999999875458888865 4444332111000
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeC-CEEEEEcCCC-cEEEEecCCCCCC-CCCCCCcccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDD-RVIFKLTNDL-KVKIVAGIPLHCR-TGDKDKRDFKDKQSKT 410 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~-~~I~~i~~~G-~v~~vaG~~~~~~-~~~~~~~~~~~~~~~~ 410 (770)
....-.....|..|+ +|.|||+.. +-|.++++.. .+..+.-...... .....
T Consensus 253 -------------~~l~~~~i~~i~~d~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~----------- 307 (781)
T 3v9f_A 253 -------------HGALSSYIFSIKQLK-DNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNN----------- 307 (781)
T ss_dssp ----------------CCCCEEEEEECT-TSEEEEEESSSCEEEEETTCC---------CEEECBCSST-----------
T ss_pred -------------ccccCceEEEEEECC-CCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCC-----------
Confidence 000112456889998 999999875 7889998654 3322211000000 00000
Q ss_pred ccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-CcEEEeecCccCCCCCcCCCCCcccccCc
Q psy4832 411 KKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNS 489 (770)
Q Consensus 411 ~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~ 489 (770)
..-.-....+|..|++|+|||+-..+. |..+++. +.+..+.-.....
T Consensus 308 ------------~~l~~~~v~~i~~D~~g~lWigt~~~G----l~~~~~~~~~~~~~~~~~~~~---------------- 355 (781)
T 3v9f_A 308 ------------YSLSNASARYIFQDSFNNIWIGTWGGG----INFISNAPPTFHTWSYSPTQM---------------- 355 (781)
T ss_dssp ------------TSBSSSCEEEEEECSSCCEEEEEBSSC----EEEECSSCCSCEEEC----CC----------------
T ss_pred ------------CCCCCCeEEEEEEeCCCCEEEEecCCe----EEEeCCCCCcceeeccCcccc----------------
Confidence 000013468899999999999986554 5666653 3444432110000
Q ss_pred cCcccccceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 490 KETLLTSTARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 490 ~d~~~~~~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
.... -.-+...+|+.+++|.|||+..+
T Consensus 356 ~~~~----l~~~~v~~i~~d~~g~lWigt~~ 382 (781)
T 3v9f_A 356 NESS----LSNKVVSSVCDDGQGKLWIGTDG 382 (781)
T ss_dssp CSSC----CSSSCEEEEEECTTSCEEEEEBS
T ss_pred ccCC----CCCcceEEEEEcCCCCEEEEeCC
Confidence 0000 01134778999999999998643
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.21 E-value=3.4e-05 Score=87.00 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=36.1
Q ss_pred CC-CEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEE-e-CCCCcEEEEe
Q psy4832 190 DG-SLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLAL-S-PADGHLYISD 240 (770)
Q Consensus 190 dG-~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav-~-p~~g~lyvsd 240 (770)
|| .|||+|. ++|.+|+.+ .++..++.++. -..|.++++ . |..+.||++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~--g~~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN--AKGIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS--CCSEEEEEECCSSBCSEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC--CCCCcceeeeecCCCcEEEEec
Confidence 55 4899987 499999976 46566664332 346999998 4 7788999995
No 134
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.20 E-value=0.0046 Score=64.24 Aligned_cols=220 Identities=15% Similarity=0.074 Sum_probs=122.7
Q ss_pred CceEEEEcCCCCEEE-EeC-ceEEEEcCCC-c--EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 181 TPVALTSGPDGSLYV-GDF-NLVRRLTPEG-N--VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 181 ~P~~la~~~dG~lyv-~d~-~~I~~i~~~G-~--v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
....+++.|+|.+++ +.. +.|+.++.+. + ....+ .........++++| ++.++++-..++.|..++.
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~---- 170 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL---TSSAPACYALAISP-DSKVCFSCCSDGNIAVWDL---- 170 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE---ECSSSCEEEEEECT-TSSEEEEEETTSCEEEEET----
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec---ccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeC----
Confidence 467899999998554 443 5788887653 3 22222 11223457899998 5655555555667777742
Q ss_pred cCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCCC-eEEECCC-CcEEEeecCCCCC
Q psy4832 256 ADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPE-GIIHTLIGHHKHH 332 (770)
Q Consensus 256 ~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~-G~i~t~~g~~~~~ 332 (770)
.++........ .-.....+++++++.++++ .... |+.+|.. +........
T Consensus 171 --~~~~~~~~~~~---------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---- 223 (337)
T 1gxr_A 171 --HNQTLVRQFQG---------------------HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF---- 223 (337)
T ss_dssp --TTTEEEEEECC---------------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC----
T ss_pred --CCCceeeeeec---------------------ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC----
Confidence 12222221110 0113568899988875544 4333 7777754 433332211
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCCeEE-EEe-CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLH-FID-DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~ly-v~D-~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
-..+..++++| ++.++ ++. ++.|+.++.. ++...+.+
T Consensus 224 ------------------~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~~~~--------------------- 263 (337)
T 1gxr_A 224 ------------------TSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKYQLHL--------------------- 263 (337)
T ss_dssp ------------------SSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEEEECC---------------------
T ss_pred ------------------CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeEEEcC---------------------
Confidence 11356789998 66644 444 5677777743 33322221
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCcccccC
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEFEKN 488 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~~~~ 488 (770)
.-..+..++++++|.++++-...+. |+..+. +++.......
T Consensus 264 ----------------~~~~v~~~~~~~~~~~l~~~~~dg~---i~~~~~~~~~~~~~~~~------------------- 305 (337)
T 1gxr_A 264 ----------------HESCVLSLKFAYCGKWFVSTGKDNL---LNAWRTPYGASIFQSKE------------------- 305 (337)
T ss_dssp ----------------CSSCEEEEEECTTSSEEEEEETTSE---EEEEETTTCCEEEEEEC-------------------
T ss_pred ----------------CccceeEEEECCCCCEEEEecCCCc---EEEEECCCCeEEEEecC-------------------
Confidence 0123689999999997776665554 455553 3443222110
Q ss_pred ccCcccccceecCCeeEEEEcCCCcEEEEcCCCceE
Q psy4832 489 SKETLLTSTARFTSISALSVSPDGVVNVADQGSLHI 524 (770)
Q Consensus 489 ~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I 524 (770)
-..+.+++++|+|.++++-..++.|
T Consensus 306 -----------~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 306 -----------SSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp -----------SSCEEEEEECTTSCEEEEEETTSCE
T ss_pred -----------CCcEEEEEECCCCCEEEEecCCCeE
Confidence 1236789999999776654444443
No 135
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.19 E-value=0.00056 Score=78.19 Aligned_cols=103 Identities=10% Similarity=0.039 Sum_probs=69.1
Q ss_pred EeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEE
Q psy4832 229 LSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFI 307 (770)
Q Consensus 229 v~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYv 307 (770)
.|| .+.+||+....+.|..|+. .++.+......|. .|++++++++|. +|+
T Consensus 163 ~d~-~~~~~V~~~~~~~V~viD~------~t~~v~~~i~~g~----------------------~p~~v~~SpDGr~lyv 213 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAGQIALIDG------STYEIKTVLDTGY----------------------AVHISRLSASGRYLFV 213 (567)
T ss_dssp CCG-GGEEEEEETTTTEEEEEET------TTCCEEEEEECSS----------------------CEEEEEECTTSCEEEE
T ss_pred cCC-CceEEEEeCCCCeEEEEEC------CCCeEEEEEeCCC----------------------CccceEECCCCCEEEE
Confidence 444 5789999999999999953 2333332222211 478999999987 899
Q ss_pred EeCCC-eEEECC---CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEe----CCCC-eEEEEe--CCEEEE
Q psy4832 308 ADGTN-IRVVSP---EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALS----PLDD-SLHFID--DRVIFK 376 (770)
Q Consensus 308 aD~~~-Ir~id~---~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d----~~~g-~lyv~D--~~~I~~ 376 (770)
+...+ |.++|. .+++..-+..+ ..|.+|+++ | +| .|||++ .+.|..
T Consensus 214 ~~~dg~V~viD~~~~t~~~v~~i~~G----------------------~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 214 IGRDGKVNMIDLWMKEPTTVAEIKIG----------------------SEARSIETSKMEGW-EDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp EETTSEEEEEETTSSSCCEEEEEECC----------------------SEEEEEEECCSTTC-TTTEEEEEEEETTEEEE
T ss_pred EcCCCeEEEEECCCCCCcEeEEEecC----------------------CCCceeEEccccCC-CCCEEEEEEccCCeEEE
Confidence 87655 999987 44443222111 148899999 6 55 689987 688888
Q ss_pred EcC-CCcE
Q psy4832 377 LTN-DLKV 383 (770)
Q Consensus 377 i~~-~G~v 383 (770)
+|. +.++
T Consensus 271 iD~~t~~~ 278 (567)
T 1qks_A 271 MDGETLEP 278 (567)
T ss_dssp EETTTCCE
T ss_pred EECCCCcE
Confidence 884 3443
No 136
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.16 E-value=0.00028 Score=74.56 Aligned_cols=149 Identities=13% Similarity=0.159 Sum_probs=86.2
Q ss_pred cCCCCEEEEeC--ceEEEEcCCCcEEEEeccCcccccceeEEEEeCC---CC----cEEEEeCC--CcEEEEEeccCCcc
Q psy4832 188 GPDGSLYVGDF--NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPA---DG----HLYISDAE--KHQILRVLSLESVA 256 (770)
Q Consensus 188 ~~dG~lyv~d~--~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~---~g----~lyvsd~~--~~~I~~i~~~~~~~ 256 (770)
+|..+++++-. ..+..++.+|+....+.. ..++++.+-|. +| .+|+++.. +++|..+..
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i----- 106 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYNT-----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI----- 106 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEECC-----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE-----
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEccC-----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE-----
Confidence 55666666442 478888888888876631 33556555441 11 46899998 888876643
Q ss_pred CCC-CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEE--cc-CCc--EEEEeCCC-eEE--E-C-CCCcEEE-
Q psy4832 257 DPS-INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAI--KA-DKT--MFIADGTN-IRV--V-S-PEGIIHT- 324 (770)
Q Consensus 257 ~~~-g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIav--d~-~G~--lYvaD~~~-Ir~--i-d-~~G~i~t- 324 (770)
+++ +.+..+.. .. ......+..|.||++ ++ .|. +|+.+... +.. + + .+|.++.
T Consensus 107 Dp~~~~l~~i~~-~~--------------~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 107 DGKNGTLQSMTD-PD--------------HPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGK 171 (355)
T ss_dssp CTTTCCEEECSC-TT--------------SCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE
T ss_pred CCCCCceeeccc-cc--------------cCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccce
Confidence 322 23333211 00 001123568999999 66 454 66666544 332 2 2 3443321
Q ss_pred eecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcCC
Q psy4832 325 LIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTND 380 (770)
Q Consensus 325 ~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~~ 380 (770)
++..-.. -..|.++++|+..+.|||++ +..|++++.+
T Consensus 172 lVR~f~l-------------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 172 KVRAFKM-------------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEC-------------------SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEEecC-------------------CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 1111000 01588999998789999999 5679999943
No 137
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.14 E-value=0.0024 Score=68.50 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=64.7
Q ss_pred CEEEEeC-------ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeC---------CCcEEEEEeccCC
Q psy4832 192 SLYVGDF-------NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDA---------EKHQILRVLSLES 254 (770)
Q Consensus 192 ~lyv~d~-------~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~---------~~~~I~~i~~~~~ 254 (770)
.+||++. +.|.++|. +|++...+.. -..| +|+++|....||+++. ..+.|..++..
T Consensus 17 ~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~----g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-- 89 (361)
T 2oiz_A 17 RIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT----AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-- 89 (361)
T ss_dssp EEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC----CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT--
T ss_pred EEEEECCCCCccccCeEEEEECCCCeEEEEecC----CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc--
Confidence 5788774 37888884 5776655432 1458 9999997778999974 23568888521
Q ss_pred ccCCCCcE-EEEE-CCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC--C-eEEECCC-CcEE
Q psy4832 255 VADPSINW-EVAV-GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT--N-IRVVSPE-GIIH 323 (770)
Q Consensus 255 ~~~~~g~~-~~va-G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~--~-Ir~id~~-G~i~ 323 (770)
++.. ..+. +.+. ...-..|.+|+++++|. ||++... + |.++|.+ +++.
T Consensus 90 ----t~~~~~~i~~~~~~-----------------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 90 ----KLTFEKEISLPPKR-----------------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV 144 (361)
T ss_dssp ----TCCEEEEEEECTTB-----------------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE
T ss_pred ----CCcEEEEEEcCccc-----------------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE
Confidence 2222 2221 1100 00123699999999986 9998743 3 8888854 4443
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.13 E-value=0.013 Score=60.85 Aligned_cols=225 Identities=14% Similarity=0.066 Sum_probs=123.5
Q ss_pred CceEEEEcCCCCEEEEeC-ceEEEEcCC-CcE---EEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 181 TPVALTSGPDGSLYVGDF-NLVRRLTPE-GNV---FTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~-~~I~~i~~~-G~v---~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
...++++.|+|.++++-. +.|+.++.+ +.. ...+.. ...-.....++++| ++.++++-..++.|..++..
T Consensus 53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~--- 127 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC-LNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLA--- 127 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC-SCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECC---
T ss_pred ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccc-cCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECC---
Confidence 356788999998666544 567777643 211 111110 12234467899998 66655555556777777431
Q ss_pred cCCCCc--E-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEE-EEeCCC-eEEECCC-CcEEEeecCC
Q psy4832 256 ADPSIN--W-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMF-IADGTN-IRVVSPE-GIIHTLIGHH 329 (770)
Q Consensus 256 ~~~~g~--~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lY-vaD~~~-Ir~id~~-G~i~t~~g~~ 329 (770)
++. . ..+.+. -.....+++.+++.++ ++.... |+..+.. +.....+...
T Consensus 128 ---~~~~~~~~~~~~~----------------------~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~ 182 (337)
T 1gxr_A 128 ---APTPRIKAELTSS----------------------APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182 (337)
T ss_dssp ---CC--EEEEEEECS----------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred ---CCCcceeeecccC----------------------CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc
Confidence 122 1 111110 1134678888888744 444433 8777753 4333222111
Q ss_pred CCCCCcCCCccCCCcccccccccCcceEEEeCCCCeE-EEEe-CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcccccc
Q psy4832 330 KHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSL-HFID-DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDK 406 (770)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~l-yv~D-~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~ 406 (770)
-.....++++| ++.+ +++. ++.|+.++.. ++.......
T Consensus 183 ---------------------~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----------------- 223 (337)
T 1gxr_A 183 ---------------------TDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDF----------------- 223 (337)
T ss_dssp ---------------------SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC-----------------
T ss_pred ---------------------cCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecC-----------------
Confidence 12366899999 6654 4444 5778888743 433222210
Q ss_pred ccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCccc
Q psy4832 407 QSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEF 485 (770)
Q Consensus 407 ~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~ 485 (770)
-..+..++++|+|.++++-...+. |+.++. +++...+.+.
T Consensus 224 --------------------~~~v~~~~~s~~~~~l~~~~~~~~---i~~~~~~~~~~~~~~~~---------------- 264 (337)
T 1gxr_A 224 --------------------TSQIFSLGYCPTGEWLAVGMESSN---VEVLHVNKPDKYQLHLH---------------- 264 (337)
T ss_dssp --------------------SSCEEEEEECTTSSEEEEEETTSC---EEEEETTSSCEEEECCC----------------
T ss_pred --------------------CCceEEEEECCCCCEEEEEcCCCc---EEEEECCCCCeEEEcCC----------------
Confidence 123688999999986666555544 555554 3333322211
Q ss_pred ccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEee
Q psy4832 486 EKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 486 ~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i 527 (770)
-..+.+++++|+|.++++-..++.|+..
T Consensus 265 --------------~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 265 --------------ESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp --------------SSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred --------------ccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 1236789999999877665555555444
No 139
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.12 E-value=0.0033 Score=66.04 Aligned_cols=219 Identities=17% Similarity=0.170 Sum_probs=125.8
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
-.++++.+++.+.++-. +.|+.++. +|+....+.. .......++++| ++..+++-...+.|..++..
T Consensus 83 v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~---~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~------ 152 (321)
T 3ow8_A 83 VVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA---GPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE------ 152 (321)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC---CTTCCCCEEECT-TSSEEEEECTTSEEEEEETT------
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC---CCccEEEEEECC-CCCEEEEEcCCCcEEEEEcC------
Confidence 35677778877666543 47777774 4555544421 223356799998 77777777777888777531
Q ss_pred CCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CCC-eEEECC-CCcEE-EeecCCCCCC
Q psy4832 259 SINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GTN-IRVVSP-EGIIH-TLIGHHKHHN 333 (770)
Q Consensus 259 ~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~~-Ir~id~-~G~i~-t~~g~~~~~~ 333 (770)
++... .+.+.+ .....+++.++|.+.++- ... |+..|. .++.. ++-+..
T Consensus 153 ~~~~~~~~~~~~----------------------~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~---- 206 (321)
T 3ow8_A 153 SGKKEYSLDTRG----------------------KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA---- 206 (321)
T ss_dssp TCSEEEEEECSS----------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----
T ss_pred CCceeEEecCCC----------------------ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC----
Confidence 22221 222111 124578999998865553 333 888774 35433 332211
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcE-EEEecCCCCCCCCCCCCccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKV-KIVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v-~~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
.....|+++| ++.++++- .+.|+..+. .+.. ..+.+.
T Consensus 207 ------------------~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-------------------- 247 (321)
T 3ow8_A 207 ------------------MPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGH-------------------- 247 (321)
T ss_dssp ------------------SCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCC--------------------
T ss_pred ------------------CceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCC--------------------
Confidence 1246899999 77766654 456766663 3332 222211
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcCCCCCccccc
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCNTTNCAEFEK 487 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~~~~~~~~~~ 487 (770)
-.....++++|+|.++++-...+. |+..+. +++ +.++.+..
T Consensus 248 -----------------~~~v~~~~~sp~~~~l~s~s~D~~---v~iwd~~~~~~~~~~~~h~----------------- 290 (321)
T 3ow8_A 248 -----------------ASWVLNVAFCPDDTHFVSSSSDKS---VKVWDVGTRTCVHTFFDHQ----------------- 290 (321)
T ss_dssp -----------------SSCEEEEEECTTSSEEEEEETTSC---EEEEETTTTEEEEEECCCS-----------------
T ss_pred -----------------CCceEEEEECCCCCEEEEEeCCCc---EEEEeCCCCEEEEEEcCCC-----------------
Confidence 123688999999987776665554 455553 343 22232111
Q ss_pred CccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEE
Q psy4832 488 NSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHIL 525 (770)
Q Consensus 488 ~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~ 525 (770)
....+|+++|+|..+++-...+.|+
T Consensus 291 -------------~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 291 -------------DQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp -------------SCEEEEEECTTSSEEEEEETTCCEE
T ss_pred -------------CcEEEEEECCCCCEEEEEeCCCeEE
Confidence 2367899999998777654444444
No 140
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.10 E-value=0.0035 Score=68.41 Aligned_cols=213 Identities=10% Similarity=-0.038 Sum_probs=118.4
Q ss_pred CCCCcEEEEeCCCcEEEEEeccCCccCCCC-cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe
Q psy4832 231 PADGHLYISDAEKHQILRVLSLESVADPSI-NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD 309 (770)
Q Consensus 231 p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g-~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD 309 (770)
+....||++.-.+++|+.|+.... |.. .+..+... +. ......+..|+++.+.++| |||+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~---p~~p~~~k~ie~-~~-------------~~~~~g~s~Ph~~~~~pdG-i~Vs~ 154 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPN---PREPKIIKVIEP-EE-------------VKKVSGYSRLHTVHCGPDA-IYISA 154 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSC---TTSCEEEEEECH-HH-------------HHHHHCEEEEEEEEECSSC-EEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCC---CCCceeeeeech-hh-------------cccccCCCcccceeECCCe-EEEEc
Confidence 456789999999999999964321 111 11111100 00 0001124479999999999 99975
Q ss_pred CCC--------eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe---------
Q psy4832 310 GTN--------IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--------- 370 (770)
Q Consensus 310 ~~~--------Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--------- 370 (770)
.++ |..+|.. +++..-+..+.. .-..+.++.+.| +++ +|+++
T Consensus 155 ~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~------------------~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 155 LGNEEGEGPGGILMLDHYSFEPLGKWEIDRG------------------DQYLAYDFWWNL-PNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEETTSCSCCEEEEECTTTCCEEEECCSBCT------------------TCCCCCCEEEET-TTTEEEECBCCCHHHHTT
T ss_pred CCCcCCCCCCeEEEEECCCCeEEEEEccCCC------------------CccccceEEECC-CCCEEEEccCcCcccccc
Confidence 332 8889965 666554432210 012356788898 655 55564
Q ss_pred -----------CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEE--c
Q psy4832 371 -----------DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAF--S 436 (770)
Q Consensus 371 -----------~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giav--d 436 (770)
.++|..++.+ +++....-.+.. =..|..|.+ +
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~----------------------------------g~~P~~i~f~~~ 261 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE----------------------------------NRMALELRPLHD 261 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT----------------------------------EEEEEEEEECSS
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCC----------------------------------CCccceeEeeEC
Confidence 4788888854 432211110000 023788877 8
Q ss_pred CCCC-EEEEeC-----CCCceeeEEEEcCCCcEEEeecCccCCCCCcCCCCCcccccCccCccc---cc-ceecCCeeEE
Q psy4832 437 PTGD-LYIADI-----DARKVNALRVIDSTGRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLL---TS-TARFTSISAL 506 (770)
Q Consensus 437 ~~G~-lyVaD~-----~~~ri~~i~~i~~~G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~---~~-~~~l~~P~gi 506 (770)
|+|. +||+.. .+..|..++. + +|.+....--...... ...... .. .+.-..|.+|
T Consensus 262 Pdg~~aYV~~e~~~~~Lss~V~v~~~-d-~g~~~~~~vIdi~~~~-------------v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 262 PTKLMGFINMVVSLKDLSSSIWLWFY-E-DGKWNAEKVIEIPAEP-------------LEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp TTCCEEEEEEEEETTTCCEEEEEEEE-E-TTEEEEEEEEEECCEE-------------CCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCEEEEEEeeeccCCCceEEEEEe-c-CCceeEEEEEeCCCcc-------------ccccccccccccccCCCceeEE
Confidence 9887 898887 6665544433 2 2543221100000000 000000 00 0012469999
Q ss_pred EEcCCC-cEEEEcCCCceEEeeec
Q psy4832 507 SVSPDG-VVNVADQGSLHILALQH 529 (770)
Q Consensus 507 av~~dG-~lyvaD~~~~~I~~i~~ 529 (770)
.+++|| .|||++.+.+.|..+..
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEe
Confidence 999999 58999999999888764
No 141
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.05 E-value=0.00062 Score=74.30 Aligned_cols=206 Identities=13% Similarity=0.018 Sum_probs=112.4
Q ss_pred CCCccEEecccCCCeEEEEeccCccCCcc---CCCCCcccccccccCceEEEEcCCCCEEEEeC--------ceEEEEcC
Q psy4832 138 GDGSSLHLKHEFPRTVSVVMGTGLQRPLV---CKDCDGVARDARLLTPVALTSGPDGSLYVGDF--------NLVRRLTP 206 (770)
Q Consensus 138 ~dG~~~~~~~~~~~~i~~v~g~G~~~~~~---~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~--------~~I~~i~~ 206 (770)
.++..+|+....+..|.++.-.-..+... .....-......+..|..+.+.|+| |||+.. +.|..+|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 45556666655566666665321111000 0000000112235589999999999 999654 37999996
Q ss_pred C-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC------------------CcEEEEEeccCCccCCCCcEEEEEC
Q psy4832 207 E-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE------------------KHQILRVLSLESVADPSINWEVAVG 267 (770)
Q Consensus 207 ~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~------------------~~~I~~i~~~~~~~~~~g~~~~vaG 267 (770)
. +++...+..+......++++.++|..+.+|+++++ .++|..++.. ++.+....-
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~------~~k~~~tI~ 245 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR------KRKRIHSLT 245 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT------TTEEEEEEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC------CCcEeeEEe
Confidence 6 78887775443334557788899866677777643 6888888532 222211111
Q ss_pred CCccccCCCCCCcCCCcccccccccCcceEEE--ccCCc-EEEEeC-----C--CeEEECC-CCcEEEe--e--cCCCCC
Q psy4832 268 SGERCIPGDETNCGDNGPALAAKLSHPKGLAI--KADKT-MFIADG-----T--NIRVVSP-EGIIHTL--I--GHHKHH 332 (770)
Q Consensus 268 ~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIav--d~~G~-lYvaD~-----~--~Ir~id~-~G~i~t~--~--g~~~~~ 332 (770)
.|. . =..|..|++ +++|. +||+.. . +|..+.. +|..... + .....
T Consensus 246 vg~-----------~--------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v- 305 (462)
T 2ece_A 246 LGE-----------E--------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL- 305 (462)
T ss_dssp SCT-----------T--------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC-
T ss_pred cCC-----------C--------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc-
Confidence 110 0 014778877 88886 888754 2 2544322 2432211 1 11000
Q ss_pred CCcCCCccCCCcccccc---c-ccCcceEEEeCCCC-eEEEEe--CCEEEEEcC
Q psy4832 333 NIWSPFNCHRSFPASTA---Q-LQWPTGLALSPLDD-SLHFID--DRVIFKLTN 379 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~---~-l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~ 379 (770)
....+.... . -..|.+|.+++ +| .|||++ .+.|..++-
T Consensus 306 --------~~~lp~~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 306 --------EGNLPEILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp --------CSSCCGGGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEEC
T ss_pred --------cccccccccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEe
Confidence 000000000 0 24699999999 65 599999 577877773
No 142
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.05 E-value=0.065 Score=66.97 Aligned_cols=67 Identities=9% Similarity=0.010 Sum_probs=45.1
Q ss_pred cCceEEEEcCCCCEEEEe-C-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 180 LTPVALTSGPDGSLYVGD-F-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d-~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
....++++.|+|.++++- . +.|+.++. +++....+. ..-.....++++| ++.+.++-..++.|..++
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK---AHEDEVLCCAFSS-DDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec---cCCCCEEEEEEec-CCCEEEEEeCCCeEEEEE
Confidence 345788999999877653 3 57888774 466554442 2234567899998 666666666677887775
No 143
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.022 Score=61.11 Aligned_cols=164 Identities=15% Similarity=0.104 Sum_probs=79.5
Q ss_pred cCceEEEEcCCCC-EEE-EeC-ceEEEEcC-----CCc------EEEEeccCcc-------cccceeEEEEeCCCCcEEE
Q psy4832 180 LTPVALTSGPDGS-LYV-GDF-NLVRRLTP-----EGN------VFTVLQLSAT-------QVSYQYYLALSPADGHLYI 238 (770)
Q Consensus 180 ~~P~~la~~~dG~-lyv-~d~-~~I~~i~~-----~G~------v~~~~~~~~~-------~~~~p~~lav~p~~g~lyv 238 (770)
....++++.|+|. +++ +.. +.|+.++. +|+ ....+..... .-.....++++| ++.+++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 124 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-DGNSIV 124 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT-TSSEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC-CCCEEE
Confidence 3457899999998 555 444 45665554 344 2222221100 122567899998 666666
Q ss_pred EeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEE
Q psy4832 239 SDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVV 316 (770)
Q Consensus 239 sd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~i 316 (770)
+-..++.|..++ .++........ .-.....|++.+++. |+.+.... |+..
T Consensus 125 ~~~~dg~i~i~~-------~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 125 TGVENGELRLWN-------KTGALLNVLNF---------------------HRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp EEETTSCEEEEE-------TTSCEEEEECC---------------------CCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred EEeCCCeEEEEe-------CCCCeeeeccC---------------------CCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 655567777773 33433222210 011356888888887 44444433 7777
Q ss_pred CC-CCcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcC
Q psy4832 317 SP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTN 379 (770)
Q Consensus 317 d~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~ 379 (770)
+. .+.....+........ ...+ ......-.....+++.+ ++.++++. ++.|+.++.
T Consensus 177 d~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~i~~~d~ 234 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGS--SINA----ENHSGDGSLGVDVEWVD-DDKFVIPGPKGAIFVYQI 234 (425)
T ss_dssp ETTTTEEEEEECCC---------------------CCCBSCCEEEE-TTEEEEECGGGCEEEEET
T ss_pred ECCCCcEEEEeeccccCcc--ceee----ccccCCcceeeEEEEcC-CCEEEEEcCCCeEEEEEc
Confidence 74 3443332221110000 0000 00000011256778887 77666655 456666663
No 144
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.02 E-value=0.0002 Score=77.13 Aligned_cols=103 Identities=3% Similarity=-0.175 Sum_probs=67.5
Q ss_pred CCEEEEeC--c----eEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeC---------CCcEEEEEeccCC
Q psy4832 191 GSLYVGDF--N----LVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDA---------EKHQILRVLSLES 254 (770)
Q Consensus 191 G~lyv~d~--~----~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~---------~~~~I~~i~~~~~ 254 (770)
..+||++. + .|..||.+ +++...+..+ ..| +++++|....|||++. ..+.|..|+..
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG----~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-- 104 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA----FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-- 104 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC----TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT--
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCC----CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC--
Confidence 56888876 3 78899865 6776655432 248 9999998889999984 35789999532
Q ss_pred ccCCCCcE-EEE-ECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC--C-eEE--ECCCC
Q psy4832 255 VADPSINW-EVA-VGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT--N-IRV--VSPEG 320 (770)
Q Consensus 255 ~~~~~g~~-~~v-aG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~--~-Ir~--id~~G 320 (770)
++.+ ..+ .+.+.+ ......|.+|+++++|. |||+... + |.+ +|..-
T Consensus 105 ----T~~vv~~I~v~~~~~----------------~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 105 ----TFLPIADIELPDAPR----------------FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp ----TCCEEEEEEETTSCS----------------CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred ----CCCEEEEEECCCccc----------------cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 2232 222 221100 01124699999999985 9999743 3 777 88644
No 145
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.00 E-value=7.4e-05 Score=83.38 Aligned_cols=131 Identities=23% Similarity=0.378 Sum_probs=83.5
Q ss_pred cccccceeEEEEeCCCCcEEEEeCCC---------------------cEEEEEeccCCccCCC---CcEEEEECCCcccc
Q psy4832 218 ATQVSYQYYLALSPADGHLYISDAEK---------------------HQILRVLSLESVADPS---INWEVAVGSGERCI 273 (770)
Q Consensus 218 ~~~~~~p~~lav~p~~g~lyvsd~~~---------------------~~I~~i~~~~~~~~~~---g~~~~vaG~g~~~~ 273 (770)
++.+..|.+++++|.++.||++-+++ ++|+++....+ ++. ..+++++-.|..-.
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~--d~~a~~f~W~i~l~~G~p~~ 457 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRD--DHASKTFAWDLFVVAGNPSV 457 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGG--CTTCSEEEEEEEEECCCTTT
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCC--CcccceeeEEEEEEccCCcc
Confidence 56778899999999999999997653 67888864322 221 12444332111100
Q ss_pred CCCCCCcCCCcccccccccCcceEEEccCCcEEE-EeCC-------------CeEEECC-CCcEEEeecCCCCCCCcCCC
Q psy4832 274 PGDETNCGDNGPALAAKLSHPKGLAIKADKTMFI-ADGT-------------NIRVVSP-EGIIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 274 p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYv-aD~~-------------~Ir~id~-~G~i~t~~g~~~~~~~~~p~ 338 (770)
.....+.|.........|+.|.+|+||++|.||| +|.. .++.+++ .|.+..++...
T Consensus 458 ~~~~~~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--------- 528 (592)
T 4a9v_A 458 HAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--------- 528 (592)
T ss_dssp STTSGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------
T ss_pred cccccccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------
Confidence 0000011222223345799999999999999999 7753 2788887 58888776321
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEe
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFID 370 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D 370 (770)
.+..|+||+++|....|||+-
T Consensus 529 -----------~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 -----------IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp -----------TTCEEEEEEECTTSSEEEEEE
T ss_pred -----------CCccccCCEECCCCCEEEEEE
Confidence 134699999999334588874
No 146
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.97 E-value=0.027 Score=59.00 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=102.1
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
.-..+++++ ++.+.++-..++.|+.++. .++.. ..+.+. -.....+++.+
T Consensus 82 ~v~~~~~~~-~~~~l~s~s~D~~i~lWd~------~~~~~~~~~~~~----------------------~~~~~~~~~sp 132 (321)
T 3ow8_A 82 GVVSVDISH-TLPIAASSSLDAHIRLWDL------ENGKQIKSIDAG----------------------PVDAWTLAFSP 132 (321)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEET------TTTEEEEEEECC----------------------TTCCCCEEECT
T ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEEC------CCCCEEEEEeCC----------------------CccEEEEEECC
Confidence 456788886 6777777777778877753 22322 222111 01245788999
Q ss_pred CCcEEEEeCCC--eEEECCC-Cc-EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEE
Q psy4832 302 DKTMFIADGTN--IRVVSPE-GI-IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIF 375 (770)
Q Consensus 302 ~G~lYvaD~~~--Ir~id~~-G~-i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~ 375 (770)
+|.++++-... |+.++.. +. ..++.+.. .....++++| +++++++- ++.|+
T Consensus 133 dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~----------------------~~v~~~~~sp-dg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 133 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRG----------------------KFILSIAYSP-DGKYLASGAIDGIIN 189 (321)
T ss_dssp TSSEEEEECTTSEEEEEETTTCSEEEEEECSS----------------------SCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCceeEEecCCC----------------------ceEEEEEECC-CCCEEEEEcCCCeEE
Confidence 98866654433 6666633 32 22222111 1356799999 77755543 56777
Q ss_pred EEcC-CCcEE-EEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceee
Q psy4832 376 KLTN-DLKVK-IVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNA 453 (770)
Q Consensus 376 ~i~~-~G~v~-~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~ 453 (770)
.++. +++.. .+.+. -.....|+++|+|.++++-...+.
T Consensus 190 iwd~~~~~~~~~~~~h-------------------------------------~~~v~~l~~spd~~~l~s~s~dg~--- 229 (321)
T 3ow8_A 190 IFDIATGKLLHTLEGH-------------------------------------AMPIRSLTFSPDSQLLVTASDDGY--- 229 (321)
T ss_dssp EEETTTTEEEEEECCC-------------------------------------SSCCCEEEECTTSCEEEEECTTSC---
T ss_pred EEECCCCcEEEEEccc-------------------------------------CCceeEEEEcCCCCEEEEEcCCCe---
Confidence 7773 44432 22211 012478999999997777666554
Q ss_pred EEEEcC-CCcE-EEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEE
Q psy4832 454 LRVIDS-TGRM-FDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHIL 525 (770)
Q Consensus 454 i~~i~~-~G~i-~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~ 525 (770)
|+..+. .+.. .++.+. -.....++++|+|..+++-...+.|+
T Consensus 230 i~iwd~~~~~~~~~~~~h------------------------------~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 230 IKIYDVQHANLAGTLSGH------------------------------ASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp EEEEETTTCCEEEEECCC------------------------------SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEECCCcceeEEEcCC------------------------------CCceEEEEECCCCCEEEEEeCCCcEE
Confidence 555553 3332 222211 12366799999988766644444443
No 147
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.93 E-value=0.00074 Score=76.22 Aligned_cols=220 Identities=15% Similarity=0.135 Sum_probs=121.2
Q ss_pred eeecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEE-c-CCCC-EEEEeC-----
Q psy4832 127 HYNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTS-G-PDGS-LYVGDF----- 198 (770)
Q Consensus 127 ~~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~-~-~dG~-lyv~d~----- 198 (770)
++...+|. .||..+|+.+..+.+|.+|.-.-.. | ...-.--.-..|.++++ . |++. ||++..
T Consensus 91 ~~s~t~g~---~DG~~lfVnd~~~~rVavIdl~t~~----~---~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~ 160 (595)
T 1fwx_A 91 HMSFTEGK---YDGRFLFMNDKANTRVARVRCDVMK----C---DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPL 160 (595)
T ss_dssp EEEEETTE---EEEEEEEEEETTTTEEEEEETTTTE----E---EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEES
T ss_pred ccCCCCCC---cCCCEEEEEcCCCCEEEEEECCCce----E---eeEEeCCCCCCCcceeeeecCCCcEEEEeccccccc
Confidence 45555554 5888999999777888888743211 1 11000001136899998 4 7654 787731
Q ss_pred --------------ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCC--------------cEEEEE
Q psy4832 199 --------------NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEK--------------HQILRV 249 (770)
Q Consensus 199 --------------~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~--------------~~I~~i 249 (770)
+.+..||.+ .++...+.. .+ .|.+++++|.++.+|++..+. ..|..+
T Consensus 161 ~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V--gg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~ 236 (595)
T 1fwx_A 161 VNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV--SG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVF 236 (595)
T ss_dssp SCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE--SS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEE
T ss_pred CCCCcccccccccCceEEEEECCCCeEEEEEEe--CC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEe
Confidence 367888866 344443322 12 699999999888899998776 334444
Q ss_pred eccCC-ccCCCC------cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC--eEEECCC
Q psy4832 250 LSLES-VADPSI------NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN--IRVVSPE 319 (770)
Q Consensus 250 ~~~~~-~~~~~g------~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~--Ir~id~~ 319 (770)
+.... ...++| .+.++-+.... +.--.+.-..-..|+||.++|||. +|+++... |.++|.+
T Consensus 237 ~~~~~~~~v~~Gk~~~i~~V~VID~~~~~---------~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 237 NIAEIEKAIAAGDYQELNGVKVVDGRKEA---------SSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp EHHHHHHHHHHTCSEEETTEEEEECSGGG---------CCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred eccceeEeccCCCeeEECcEEEEeCcccC---------CceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 32110 001122 23333321100 000000111124799999999997 88988654 7777754
Q ss_pred CcEEEeecCCCCCCCcCCCccCCCcccccccc-cCcceEEEeCCCCeEEEEe--CCEEEEEcCC
Q psy4832 320 GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQL-QWPTGLALSPLDDSLHFID--DRVIFKLTND 380 (770)
Q Consensus 320 G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l-~~P~gla~d~~~g~lyv~D--~~~I~~i~~~ 380 (770)
-.-..+.|.-. |..+ ...+..+ ..|..++|++ +|++|++. ++.|.+++.+
T Consensus 308 ~~~~~~~~~l~------~~~~----v~~~v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 308 RFDAVFYENAD------PRSA----VVAEPELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp GHHHHHHSCCC------GGGG----EEECCBCCSCEEEEEECT-TSEEEEEETTTTEEEEEEHH
T ss_pred ccccccccccC------cccc----eEEEcCCCCCcceEEECC-CCeEEEEEecCCcEEEEEhh
Confidence 21000000000 0000 0000011 2599999999 88999998 6888888743
No 148
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.91 E-value=0.034 Score=58.51 Aligned_cols=226 Identities=16% Similarity=0.172 Sum_probs=127.7
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
.-.++++.|+|.++++-. +.|+.++. +++....+.. .-.....++++| ++.+.++-..++.|..++...
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~---~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~---- 128 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL---RSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKT---- 128 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC---SSSCEEEEEECT-TSSEEEEEETTCEEEEEETTT----
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec---CCccEEEEEECC-CCCEEEEEeCCCeEEEEECcc----
Confidence 346788999998776543 47887774 4555544422 223457899998 666666666667776664321
Q ss_pred CCCcEE---EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECC-CCcE-EEeecCCCC
Q psy4832 258 PSINWE---VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSP-EGII-HTLIGHHKH 331 (770)
Q Consensus 258 ~~g~~~---~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~-~G~i-~t~~g~~~~ 331 (770)
..+... .+.+. -.....+++.+++.|+.+.... |+..|. .+.. .++.+..
T Consensus 129 ~~~~~~~~~~~~~h----------------------~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-- 184 (340)
T 1got_B 129 REGNVRVSRELAGH----------------------TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-- 184 (340)
T ss_dssp CSBSCEEEEEEECC----------------------SSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS--
T ss_pred CCCcceeEEEecCC----------------------CccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCC--
Confidence 111111 11111 0123456666677766665544 777774 3433 3332221
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcE-EEEecCCCCCCCCCCCCccccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKV-KIVAGIPLHCRTGDKDKRDFKDKQ 407 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v-~~vaG~~~~~~~~~~~~~~~~~~~ 407 (770)
.....++++| ++.++++- .+.|+..+. ++.. ..+.+.
T Consensus 185 --------------------~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h------------------ 225 (340)
T 1got_B 185 --------------------GDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGH------------------ 225 (340)
T ss_dssp --------------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCC------------------
T ss_pred --------------------CceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCC------------------
Confidence 1346789999 88776654 466777763 3432 222211
Q ss_pred cccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcCCCCCccc
Q psy4832 408 SKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCNTTNCAEF 485 (770)
Q Consensus 408 ~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~~~~~~~~ 485 (770)
-....+|+++|+|.++++-...+. |+..|. .+. +..+.. .
T Consensus 226 -------------------~~~v~~v~~~p~~~~l~s~s~d~~---v~iwd~~~~~~~~~~~~-~--------------- 267 (340)
T 1got_B 226 -------------------ESDINAICFFPNGNAFATGSDDAT---CRLFDLRADQELMTYSH-D--------------- 267 (340)
T ss_dssp -------------------SSCEEEEEECTTSSEEEEEETTSC---EEEEETTTTEEEEEECC-T---------------
T ss_pred -------------------cCCEEEEEEcCCCCEEEEEcCCCc---EEEEECCCCcEEEEEcc-C---------------
Confidence 123688999999997777666554 555554 233 222210 0
Q ss_pred ccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEee
Q psy4832 486 EKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 486 ~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i 527 (770)
........++++|+|.++++-..++.|+..
T Consensus 268 ------------~~~~~v~~~~~s~~g~~l~~g~~d~~i~vw 297 (340)
T 1got_B 268 ------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp ------------TCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ------------CcccceEEEEECCCCCEEEEECCCCeEEEE
Confidence 001235789999999887776555555444
No 149
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.91 E-value=0.079 Score=62.66 Aligned_cols=145 Identities=12% Similarity=0.051 Sum_probs=82.3
Q ss_pred CceEEEEcCCCCEEEE-eC-ceEEEEc-CCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVG-DF-NLVRRLT-PEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~-d~-~~I~~i~-~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...++++.|+|.+.++ .. +.|+.++ .+|+....+. ..-.....++++| ++.+.++-..++.|..++.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~------ 84 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ---VTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNY------ 84 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEET------
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe---cCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEEC------
Confidence 4578999999985554 43 4788887 4566655543 1223467899998 5665555555678877753
Q ss_pred CCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEECCC-C-cEE-EeecCCCC
Q psy4832 258 PSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVVSPE-G-IIH-TLIGHHKH 331 (770)
Q Consensus 258 ~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~id~~-G-~i~-t~~g~~~~ 331 (770)
.++.. ..+.+. -.....+++.++|. |..+.... |+..+.+ + ... .+.+..
T Consensus 85 ~~~~~~~~~~~~----------------------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-- 140 (814)
T 3mkq_A 85 NTGEKVVDFEAH----------------------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE-- 140 (814)
T ss_dssp TTCCEEEEEECC----------------------SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS--
T ss_pred CCCcEEEEEecC----------------------CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC--
Confidence 22332 222211 11356889999887 44444443 6666633 2 222 222211
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEE-e-CCEEEEEcC
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFI-D-DRVIFKLTN 379 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~-D-~~~I~~i~~ 379 (770)
.....++++|.++.++++ . ++.|+.++.
T Consensus 141 --------------------~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 141 --------------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp --------------------SCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred --------------------CcEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 135678888744544443 3 466766663
No 150
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.82 E-value=0.0097 Score=65.01 Aligned_cols=173 Identities=16% Similarity=0.117 Sum_probs=96.5
Q ss_pred ceEEEEcCCCcE-EEEeccCcccccceeEEEEeCCCCcEEEEeCCC--cEEEEEeccCCccCCCCcEEEEECCCccccCC
Q psy4832 199 NLVRRLTPEGNV-FTVLQLSATQVSYQYYLALSPADGHLYISDAEK--HQILRVLSLESVADPSINWEVAVGSGERCIPG 275 (770)
Q Consensus 199 ~~I~~i~~~G~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~--~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~ 275 (770)
..|+.++.+|.. ..+.+ .-.....++++|.+..|+++...+ ..|+.++. .++....+.+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~----~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~------~tg~~~~l~~~~------ 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHR----SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTL------ANGAVRQVASFP------ 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEE----ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEET------TTCCEEEEECCS------
T ss_pred ceEEEEcCCCCCCEEEeC----CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEEC------CCCcEEEeecCC------
Confidence 467777766543 33332 123467899998555566665443 57877753 234444443211
Q ss_pred CCCCcCCCcccccccccCcceEEEccCCc-EEEEeC---CC-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccc
Q psy4832 276 DETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG---TN-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTA 349 (770)
Q Consensus 276 ~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~---~~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~ 349 (770)
.....+++.|+|. |+++.. .. |+.++.. +....+.+..
T Consensus 223 ----------------~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~-------------------- 266 (415)
T 2hqs_A 223 ----------------RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR-------------------- 266 (415)
T ss_dssp ----------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCS--------------------
T ss_pred ----------------CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCC--------------------
Confidence 1245789999997 554532 22 8888854 5665544321
Q ss_pred cccCcceEEEeCCCCe-EEEEeC----CEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccc
Q psy4832 350 QLQWPTGLALSPLDDS-LHFIDD----RVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRAS 423 (770)
Q Consensus 350 ~l~~P~gla~d~~~g~-lyv~D~----~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 423 (770)
.....++++| +|. |+++.. .+|+.++.+ +++..+...
T Consensus 267 --~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---------------------------------- 309 (415)
T 2hqs_A 267 --SNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---------------------------------- 309 (415)
T ss_dssp --SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCS----------------------------------
T ss_pred --CcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEecC----------------------------------
Confidence 1345788999 776 665542 278888854 333222110
Q ss_pred ccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEE
Q psy4832 424 NMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMF 464 (770)
Q Consensus 424 ~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~ 464 (770)
-.....++++|+|. |+++...+.. ..|..++. +|++.
T Consensus 310 ---~~~~~~~~~spdG~~l~~~~~~~g~-~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 310 ---GSQNQDADVSSDGKFMVMVSSNGGQ-QHIAKQDLATGGVQ 348 (415)
T ss_dssp ---SSEEEEEEECTTSSEEEEEEECSSC-EEEEEEETTTCCEE
T ss_pred ---CCcccCeEECCCCCEEEEEECcCCc-eEEEEEECCCCCEE
Confidence 01256789999998 5555443221 24677775 44443
No 151
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.81 E-value=0.00023 Score=69.71 Aligned_cols=155 Identities=14% Similarity=0.077 Sum_probs=93.3
Q ss_pred ccCcceEEEccCCcEEEEeCCCeEEECCCC-------cEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCC
Q psy4832 291 LSHPKGLAIKADKTMFIADGTNIRVVSPEG-------IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLD 363 (770)
Q Consensus 291 l~~P~gIavd~~G~lYvaD~~~Ir~id~~G-------~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~ 363 (770)
+...+.||++|+|.||.+..++++++++.. ...+.+|..+- +.-..+.+|+ +
T Consensus 40 w~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw--------------------~~F~a~~fD~-~ 98 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGW--------------------NQFQFLFFDP-N 98 (236)
T ss_dssp CTTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCG--------------------GGCSEEEECT-T
T ss_pred cccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEeccccc--------------------ccceEEEECC-C
Confidence 456779999999999998666699998621 11344444321 1134799999 9
Q ss_pred CeEEEEeCCEEEEEcC--CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCE
Q psy4832 364 DSLHFIDDRVIFKLTN--DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDL 441 (770)
Q Consensus 364 g~lyv~D~~~I~~i~~--~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~l 441 (770)
|.||++.++.|+|+++ ++.-. .++... ...+.....-..|+++|+|.|
T Consensus 99 G~LYav~dG~iyr~~pP~~~~~~-Wl~~a~-----------------------------~vg~~gw~~~~~lff~p~G~L 148 (236)
T 1tl2_A 99 GYLYAVSKDKLYKASPPQSDTDN-WIARAT-----------------------------EVGSGGWSGFKFLFFHPNGYL 148 (236)
T ss_dssp SCEEEEETTEEEEESCCCSTTCC-HHHHSE-----------------------------EEECSSGGGEEEEEECTTSCE
T ss_pred CCEEEeCCCEEEEeCCCcCCCCc-eecccc-----------------------------EeccCCCCceEEEEECCCceE
Confidence 9999998899999985 33211 110000 000011223488999999999
Q ss_pred EEEeCCCCceeeEEEEcCCCc------EEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEE
Q psy4832 442 YIADIDARKVNALRVIDSTGR------MFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVN 515 (770)
Q Consensus 442 yVaD~~~~ri~~i~~i~~~G~------i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~ly 515 (770)
|.+. +. ++ .+...|.+. ..+..|.. .++.-.-+.++++|.||
T Consensus 149 yav~-dg-~l--yr~~~P~~~~~~wl~~~~~~g~~----------------------------g~~~yr~l~f~~~G~l~ 196 (236)
T 1tl2_A 149 YAVH-GQ-QF--YKALPPVSNQDNWLARATKIGQG----------------------------GWDTFKFLFFSSVGTLF 196 (236)
T ss_dssp EEEE-TT-EE--EEECCCSSTTCCHHHHCEEEESS----------------------------SGGGEEEEEECTTSCEE
T ss_pred EEEe-CC-cE--EecCCCCCCCcccccccceeccC----------------------------CcceEEEEEECCCCcEE
Confidence 9999 54 32 233334221 01111100 01122237799999999
Q ss_pred EEcCCCceEEeeecC
Q psy4832 516 VADQGSLHILALQHY 530 (770)
Q Consensus 516 vaD~~~~~I~~i~~~ 530 (770)
.+. ++++++..+.
T Consensus 197 ~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 197 GVQ--GGKFYEDYPP 209 (236)
T ss_dssp EEE--TTEEEEESCC
T ss_pred EEe--CCeEEecCCc
Confidence 988 7788887544
No 152
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.81 E-value=0.086 Score=59.77 Aligned_cols=199 Identities=12% Similarity=0.041 Sum_probs=104.1
Q ss_pred cCceEEEEcCCCCEEE-EeCceEEEEcCC-C----cEEEEeccCcccccc-eeEEEEeCC-CCcEEEEeCCCcEEEEEec
Q psy4832 180 LTPVALTSGPDGSLYV-GDFNLVRRLTPE-G----NVFTVLQLSATQVSY-QYYLALSPA-DGHLYISDAEKHQILRVLS 251 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv-~d~~~I~~i~~~-G----~v~~~~~~~~~~~~~-p~~lav~p~-~g~lyvsd~~~~~I~~i~~ 251 (770)
..+..+++.|+|.+++ +..+.|+.++.+ + +....+. ..-.. ...++++|. ++.+.++-..++.|..++.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~---~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~ 95 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFT---GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 95 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEEC---TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEe---cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeC
Confidence 3467889999998544 445677777654 4 3444332 12234 689999972 4444444444566666532
Q ss_pred cCCcc--CCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCC-----CeEEECCCCcE
Q psy4832 252 LESVA--DPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGT-----NIRVVSPEGII 322 (770)
Q Consensus 252 ~~~~~--~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~-----~Ir~id~~G~i 322 (770)
..+.. ....... .+.+ .-.....|++.++|...++ ... .|+..+....+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~----------------------~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~ 153 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQV----------------------LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSL 153 (615)
T ss_dssp EEEGGGTEEEEEEEEEEEC----------------------CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEE
T ss_pred CCCcccccccccccchhhc----------------------ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcc
Confidence 10000 0000111 1111 0113568899998875444 322 26666644444
Q ss_pred EEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEE-e-CCEEEEEcC-CCcEE-EEecCCCCCCCCC
Q psy4832 323 HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFI-D-DRVIFKLTN-DLKVK-IVAGIPLHCRTGD 397 (770)
Q Consensus 323 ~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~-D-~~~I~~i~~-~G~v~-~vaG~~~~~~~~~ 397 (770)
.++.+. -.....++++| ++. ++++ . ++.|+.++. .++.. .+.+...
T Consensus 154 ~~~~~~----------------------~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~------ 204 (615)
T 1pgu_A 154 GEVSGH----------------------SQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK------ 204 (615)
T ss_dssp EECCSC----------------------SSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC------
T ss_pred eeeecC----------------------CccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCC------
Confidence 443322 12356899999 664 4444 3 567777773 34322 2221100
Q ss_pred CCCccccccccccccccccCCcccccccccCCeeEEEEcCC-CCEEEEeCCCCceeeEEEEc-CCCcE
Q psy4832 398 KDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPT-GDLYIADIDARKVNALRVID-STGRM 463 (770)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~-G~lyVaD~~~~ri~~i~~i~-~~G~i 463 (770)
.-.....++++|+ |.++++-...+. |+..+ .+++.
T Consensus 205 ----------------------------~~~~v~~~~~~~~~~~~l~~~~~dg~---i~vwd~~~~~~ 241 (615)
T 1pgu_A 205 ----------------------------QGSFVRDVEFSPDSGEFVITVGSDRK---ISCFDGKSGEF 241 (615)
T ss_dssp ----------------------------TTCCEEEEEECSTTCCEEEEEETTCC---EEEEETTTCCE
T ss_pred ----------------------------CCceEEEEEECCCCCCEEEEEeCCCe---EEEEECCCCCE
Confidence 0013688999999 886665554443 55555 34554
No 153
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.77 E-value=0.036 Score=59.03 Aligned_cols=149 Identities=9% Similarity=-0.053 Sum_probs=86.3
Q ss_pred CceEEEEcCCC-CEEEEe-C-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCcc
Q psy4832 181 TPVALTSGPDG-SLYVGD-F-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVA 256 (770)
Q Consensus 181 ~P~~la~~~dG-~lyv~d-~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~ 256 (770)
...++++.|+| .++++- . +.|+.++.+ ++....+.. ...-.....++++|.++.++++-..++.|..++..
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~---- 149 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG-MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS---- 149 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC-CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT----
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec-CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC----
Confidence 34678899988 655543 3 578888754 444444421 11234567899998566777776667778777421
Q ss_pred CCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCCC-eEEECCCCcE-EEeecCCCCCC
Q psy4832 257 DPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPEGII-HTLIGHHKHHN 333 (770)
Q Consensus 257 ~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~G~i-~t~~g~~~~~~ 333 (770)
...+..+.+.... -.....+++.+++.++++ .... |+..|.++.. .++.+.
T Consensus 150 --~~~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h----- 203 (383)
T 3ei3_B 150 --GSVIQVFAKTDSW-------------------DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH----- 203 (383)
T ss_dssp --SCEEEEEECCCCS-------------------SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS-----
T ss_pred --CCceEEEeccCCC-------------------CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC-----
Confidence 1223333321100 123568899998885554 3333 8877766543 333321
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--CCEEEEEc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--DRVIFKLT 378 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~~~I~~i~ 378 (770)
-.....|+++| ++. ++++- ++.|+.++
T Consensus 204 -----------------~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 204 -----------------KAKVTHAEFNP-RCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp -----------------SSCEEEEEECS-SCTTEEEEEETTSEEEEEE
T ss_pred -----------------CCcEEEEEECC-CCCCEEEEEeCCCEEEEEe
Confidence 12456899999 765 55543 45666666
No 154
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.76 E-value=0.059 Score=56.65 Aligned_cols=220 Identities=15% Similarity=0.167 Sum_probs=119.0
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCCC-----cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPEG-----NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~G-----~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
...+++.|+|.++++-. +.|+.++... .....+. ........+++.+ ++.|+ +-...+.|..++.
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~l~-s~s~d~~i~~wd~--- 171 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA---GHTGYLSCCRFLD-DNQIV-TSSGDTTCALWDI--- 171 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE---CCSSCEEEEEEEE-TTEEE-EEETTSCEEEEET---
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec---CCCccEEEEEECC-CCcEE-EEECCCcEEEEEC---
Confidence 46788999998766543 4666666432 1222221 1122345677775 55544 4444566666642
Q ss_pred ccCCCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-C-eEEECC-CCc-EEEeecCC
Q psy4832 255 VADPSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-N-IRVVSP-EGI-IHTLIGHH 329 (770)
Q Consensus 255 ~~~~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~-Ir~id~-~G~-i~t~~g~~ 329 (770)
.++... .+.+. -.....+++.+++.++++-+. . |+..|. .+. +.++.+..
T Consensus 172 ---~~~~~~~~~~~h----------------------~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~ 226 (340)
T 1got_B 172 ---ETGQQTTTFTGH----------------------TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226 (340)
T ss_dssp ---TTTEEEEEECCC----------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred ---CCCcEEEEEcCC----------------------CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc
Confidence 123222 11110 112457899998887766433 2 777774 343 33332221
Q ss_pred CCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcccccc
Q psy4832 330 KHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDK 406 (770)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~ 406 (770)
.....|+++| +++++++- .+.|+.++.. ++........
T Consensus 227 ----------------------~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---------------- 267 (340)
T 1got_B 227 ----------------------SDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHD---------------- 267 (340)
T ss_dssp ----------------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCT----------------
T ss_pred ----------------------CCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccC----------------
Confidence 1356899999 77766654 4667777643 3322211100
Q ss_pred ccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcCCCCCcc
Q psy4832 407 QSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCNTTNCAE 484 (770)
Q Consensus 407 ~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~~~~~~~ 484 (770)
........++++|+|.++++-...+. |+..+. .+. +..+.|-.
T Consensus 268 ------------------~~~~~v~~~~~s~~g~~l~~g~~d~~---i~vwd~~~~~~~~~~~~h~-------------- 312 (340)
T 1got_B 268 ------------------NIICGITSVSFSKSGRLLLAGYDDFN---CNVWDALKADRAGVLAGHD-------------- 312 (340)
T ss_dssp ------------------TCCSCEEEEEECTTSSEEEEEETTSE---EEEEETTTCCEEEEEECCS--------------
T ss_pred ------------------CcccceEEEEECCCCCEEEEECCCCe---EEEEEcccCcEeeEeecCC--------------
Confidence 00123688999999998887766654 455553 333 33333211
Q ss_pred cccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceE
Q psy4832 485 FEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHI 524 (770)
Q Consensus 485 ~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I 524 (770)
....+|+++|+|..+++-...+.|
T Consensus 313 ----------------~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 313 ----------------NRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp ----------------SCEEEEEECTTSSCEEEEETTSCE
T ss_pred ----------------CcEEEEEEcCCCCEEEEEcCCccE
Confidence 235679999999766654444444
No 155
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.74 E-value=0.064 Score=62.89 Aligned_cols=154 Identities=13% Similarity=0.068 Sum_probs=83.1
Q ss_pred CceEEEEcCCCC-EEEEeC--c-----eEEEEcCC-CcEEEEeccCcccc---------------------cceeEEEEe
Q psy4832 181 TPVALTSGPDGS-LYVGDF--N-----LVRRLTPE-GNVFTVLQLSATQV---------------------SYQYYLALS 230 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~--~-----~I~~i~~~-G~v~~~~~~~~~~~---------------------~~p~~lav~ 230 (770)
.+..+++.|||. |+++.. + .|+.++.+ |+...++....... .....++++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 578999999998 444443 3 68888865 66655553211100 124678999
Q ss_pred CCCCcEEEEeCCCcEEEEEeccCCccCCCC---cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EE
Q psy4832 231 PADGHLYISDAEKHQILRVLSLESVADPSI---NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MF 306 (770)
Q Consensus 231 p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g---~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lY 306 (770)
|.+..|+++.. +.|+.++..+ + ....+.. .-..+..+++.|+|. |.
T Consensus 118 pDg~~l~~~~~--~~i~~~d~~~------~~~~~~~~l~~----------------------~~~~~~~~~~SPDG~~la 167 (741)
T 2ecf_A 118 PDAQRLLFPLG--GELYLYDLKQ------EGKAAVRQLTH----------------------GEGFATDAKLSPKGGFVS 167 (741)
T ss_dssp TTSSEEEEEET--TEEEEEESSS------CSTTSCCBCCC----------------------SSSCEEEEEECTTSSEEE
T ss_pred CCCCEEEEEeC--CcEEEEECCC------CCcceEEEccc----------------------CCcccccccCCCCCCEEE
Confidence 85555666665 6788774311 1 1111110 011356789999997 55
Q ss_pred EEeCCCeEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe
Q psy4832 307 IADGTNIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID 370 (770)
Q Consensus 307 vaD~~~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D 370 (770)
++...+|+.++.+ |....+...+... ...+......+..+..+.+++++| +|+ |+++.
T Consensus 168 ~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~ 227 (741)
T 2ecf_A 168 FIRGRNLWVIDLASGRQMQLTADGSTT-----IGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYAR 227 (741)
T ss_dssp EEETTEEEEEETTTTEEEECCCCCCSS-----EEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEE
T ss_pred EEeCCcEEEEecCCCCEEEeccCCccc-----eeccccceeeeeccccccceEECC-CCCEEEEEE
Confidence 5554458888865 4554443222100 000000000111244578899999 775 66653
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.73 E-value=0.033 Score=65.07 Aligned_cols=65 Identities=9% Similarity=0.017 Sum_probs=42.7
Q ss_pred cCceEEEEcCCCCEEEEeCceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 180 LTPVALTSGPDGSLYVGDFNLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv~d~~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..+..+++.||+.+.++..+.|+.++.+ |+...+... -.....++++|.+..|+++. ++.|+.++
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l~~~----~~~~~~~~~SpdG~~la~~~--~~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYLFDT----NEETASLDFSPVGDRVAYVR--NHNLYIAR 147 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTTTEEEEEECC----TTCCTTCEECTTSSEEEEEE--TTEEEEEE
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCCCceEEccCC----cccccCCcCCCCCCEEEEEE--CCeEEEEe
Confidence 4578999999977777766788888865 444444321 12356788998444555543 46777775
No 157
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.066 Score=55.97 Aligned_cols=65 Identities=8% Similarity=0.030 Sum_probs=43.0
Q ss_pred ceEEEEcCCCCEEEE-eC-ceEEEEc-CCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVG-DF-NLVRRLT-PEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~-d~-~~I~~i~-~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..++++.|+|.++++ .. +.|+.++ .+++....+. ..-.....++++| ++.++++-..++.|..++
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD---GHTGTIWSIDVDC-FTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh---hcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 467888898885554 33 4677776 4566665552 2233467899998 666666666667887775
No 158
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.69 E-value=0.00046 Score=77.06 Aligned_cols=125 Identities=23% Similarity=0.257 Sum_probs=78.5
Q ss_pred ccccCcceEEEeCCCCeEEEEeC-----------------------CEEEEEcCCC----------cEEEEecCCCCCCC
Q psy4832 349 AQLQWPTGLALSPLDDSLHFIDD-----------------------RVIFKLTNDL----------KVKIVAGIPLHCRT 395 (770)
Q Consensus 349 ~~l~~P~gla~d~~~g~lyv~D~-----------------------~~I~~i~~~G----------~v~~vaG~~~~~~~ 395 (770)
..|..|.+++++|.++.||++-+ +.|+++.+++ .+..+.|.+.....
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 45778999999998999999841 4688887532 12233444332100
Q ss_pred CCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEE-EeCCCC--------ceeeEEEEcC-CCcEEE
Q psy4832 396 GDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYI-ADIDAR--------KVNALRVIDS-TGRMFD 465 (770)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyV-aD~~~~--------ri~~i~~i~~-~G~i~~ 465 (770)
. .+...........|..|.+|+||++|.||| +|.... --+.+..+++ +|++..
T Consensus 461 ~-----------------~~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~ 523 (592)
T 4a9v_A 461 T-----------------PKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR 523 (592)
T ss_dssp S-----------------GGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEE
T ss_pred c-----------------cccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEE
Confidence 0 000001111234689999999999999999 775311 1125677787 688877
Q ss_pred eecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEEc
Q psy4832 466 FAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVAD 518 (770)
Q Consensus 466 ~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyvaD 518 (770)
++-.+ .+..|.|++++||+ .|||+-
T Consensus 524 fl~~P----------------------------~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 524 FMVGP----------------------------IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECC----------------------------TTCEEEEEEECTTSSEEEEEE
T ss_pred EEeCC----------------------------CCccccCCEECCCCCEEEEEE
Confidence 76322 02348999999998 578773
No 159
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.68 E-value=0.066 Score=58.05 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=43.4
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
...++++.|+|.++++-. +.|+.++.. ++....+. ..-.....++++| ++..+++-..++.|..++
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~---~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVSIMP-NGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC---CCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc---CCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 357899999998776543 467777654 44443332 1223467899998 677667766777887775
No 160
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.62 E-value=0.00043 Score=67.75 Aligned_cols=153 Identities=20% Similarity=0.191 Sum_probs=92.7
Q ss_pred ccCceEEEEcCCCCEEEEeCceEEEEcCCC-c------EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEec
Q psy4832 179 LLTPVALTSGPDGSLYVGDFNLVRRLTPEG-N------VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLS 251 (770)
Q Consensus 179 l~~P~~la~~~dG~lyv~d~~~I~~i~~~G-~------v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~ 251 (770)
+.+...|+++|+|.||....+.+.++++.. . ..+.++ ......=..+.+|| +|.||++ .+++|+|++.
T Consensus 40 w~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG--~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIG--NGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp CTTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEE--CSCGGGCSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred cccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEec--ccccccceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 567779999999999999667999998732 1 133443 22333345788996 9999999 3489999953
Q ss_pred cCCccCCCCcE---EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCCeEEE-CCCCc------
Q psy4832 252 LESVADPSINW---EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTNIRVV-SPEGI------ 321 (770)
Q Consensus 252 ~~~~~~~~g~~---~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~Ir~i-d~~G~------ 321 (770)
.. +.+.++ ...+|.+. ...-..|+++++|.||-+..+++++- .|.+.
T Consensus 115 P~---~~~~~Wl~~a~~vg~~g--------------------w~~~~~lff~p~G~Lyav~dg~lyr~~~P~~~~~~wl~ 171 (236)
T 1tl2_A 115 PQ---SDTDNWIARATEVGSGG--------------------WSGFKFLFFHPNGYLYAVHGQQFYKALPPVSNQDNWLA 171 (236)
T ss_dssp CC---STTCCHHHHSEEEECSS--------------------GGGEEEEEECTTSCEEEEETTEEEEECCCSSTTCCHHH
T ss_pred Cc---CCCCceeccccEeccCC--------------------CCceEEEEECCCceEEEEeCCcEEecCCCCCCCccccc
Confidence 11 011111 01111111 12236899999999998884446543 23211
Q ss_pred EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeCCEEEEEcCC
Q psy4832 322 IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVIFKLTND 380 (770)
Q Consensus 322 i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I~~i~~~ 380 (770)
-.+.+|... ...=.-|.+++ ++.||.+.+.++++..++
T Consensus 172 ~~~~~g~~g--------------------~~~yr~l~f~~-~G~l~~v~~g~~Y~~~~p 209 (236)
T 1tl2_A 172 RATKIGQGG--------------------WDTFKFLFFSS-VGTLFGVQGGKFYEDYPP 209 (236)
T ss_dssp HCEEEESSS--------------------GGGEEEEEECT-TSCEEEEETTEEEEESCC
T ss_pred ccceeccCC--------------------cceEEEEEECC-CCcEEEEeCCeEEecCCc
Confidence 112222111 00111266888 999999888899988754
No 161
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.61 E-value=0.031 Score=58.84 Aligned_cols=65 Identities=11% Similarity=-0.017 Sum_probs=40.5
Q ss_pred ceEEEEcCCCCEEEEe-C-ceEEEEcCCCc---EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGD-F-NLVRRLTPEGN---VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d-~-~~I~~i~~~G~---v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..++++.|+|.++++- . +.|+.++.+.. ....+. ..-.....++++| ++.++++-..++.|+.++
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK---EHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE---CCSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec---CCCCcccEEEEeC-CCCEEEEEcCCCeEEEEE
Confidence 4678899999866654 3 57777775543 333331 1233467899998 666666555556666664
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.58 E-value=0.061 Score=58.31 Aligned_cols=143 Identities=14% Similarity=0.143 Sum_probs=83.5
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
....+++.|++.++++-. +.|+.++. +|+....+. ..-.....++++| ++.++++-..++.|+.++..
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~---~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~----- 180 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK---GHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ----- 180 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT-----
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---ccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC-----
Confidence 457889999998777643 47888874 455554442 1223467899997 67777776666666666321
Q ss_pred CCCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CC-eEEECC-CCc-EEEeecCCCCC
Q psy4832 258 PSINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TN-IRVVSP-EGI-IHTLIGHHKHH 332 (770)
Q Consensus 258 ~~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~-Ir~id~-~G~-i~t~~g~~~~~ 332 (770)
.+... .+.+ + -.....+++.++|..+++-+ .. |+..|. .|. +.++.+..
T Consensus 181 -~~~~~~~~~~-----------h-----------~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~--- 234 (410)
T 1vyh_C 181 -GFECIRTMHG-----------H-----------DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR--- 234 (410)
T ss_dssp -SSCEEECCCC-----------C-----------SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS---
T ss_pred -CCceeEEEcC-----------C-----------CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC---
Confidence 11111 1110 0 11345788998888655543 33 777764 343 44443321
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLT 378 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~ 378 (770)
.+...+++++ ++.++++- ++.|+..+
T Consensus 235 -------------------~~v~~~~~~~-~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 235 -------------------EWVRMVRPNQ-DGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp -------------------SCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred -------------------ccEEEEEECC-CCCEEEEEcCCCeEEEEE
Confidence 1345678888 77766654 45666666
No 163
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.57 E-value=0.056 Score=57.28 Aligned_cols=150 Identities=14% Similarity=0.070 Sum_probs=81.9
Q ss_pred ceEEEEcCCCCEEEEeC-ceEEEEcC-CCcEEEEeccC-cccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 182 PVALTSGPDGSLYVGDF-NLVRRLTP-EGNVFTVLQLS-ATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~-~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
-.++++.+++.|..+.. +.|+.++. +|+........ ...-.....|+++| +|.++++-...+.|+.++. .
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~------~ 157 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDL------A 157 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEET------T
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEEC------C
Confidence 46789999988887766 46777663 34322221100 11122357899998 7777777766777777742 2
Q ss_pred CCcEE-EEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC-CC-eEEECCC-CcEEEeecCCCCCC
Q psy4832 259 SINWE-VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG-TN-IRVVSPE-GIIHTLIGHHKHHN 333 (770)
Q Consensus 259 ~g~~~-~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~-~~-Ir~id~~-G~i~t~~g~~~~~~ 333 (770)
++... .+.|- -.....+++.+++. ++++-+ .+ |+..|.. ++....+....
T Consensus 158 ~~~~~~~~~~h----------------------~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--- 212 (344)
T 4gqb_B 158 QQVVLSSYRAH----------------------AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA--- 212 (344)
T ss_dssp TTEEEEEECCC----------------------SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------
T ss_pred CCcEEEEEcCc----------------------CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecce---
Confidence 23322 22110 11245788888764 665533 23 7777643 33222221110
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN 379 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~ 379 (770)
.-..+..++++|.++.++++- ++.|+.++.
T Consensus 213 ----------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 213 ----------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp -----------------CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred ----------------eeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 112356889998556676653 567777763
No 164
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.57 E-value=0.002 Score=67.97 Aligned_cols=144 Identities=16% Similarity=0.120 Sum_probs=84.0
Q ss_pred EEEEeC----ceEEEE--cCCCcEEEEecc---C-cccccceeEEEE--eCCCCc--EEEEeCCCcEEEEEeccCCccCC
Q psy4832 193 LYVGDF----NLVRRL--TPEGNVFTVLQL---S-ATQVSYQYYLAL--SPADGH--LYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 193 lyv~d~----~~I~~i--~~~G~v~~~~~~---~-~~~~~~p~~lav--~p~~g~--lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
+|+++. ++|+.+ +++....+.++. + ...+..|+|||+ +|..+. +||++.. +++..+.... ..
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~---~~ 164 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKA---DK 164 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEE---CT
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEe---CC
Confidence 355553 455544 655333333322 1 145688999999 776664 7777766 6776653211 12
Q ss_pred CCcEE--EEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeCCC-eEEECCC------CcEEEeecC
Q psy4832 259 SINWE--VAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADGTN-IRVVSPE------GIIHTLIGH 328 (770)
Q Consensus 259 ~g~~~--~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~~~-Ir~id~~------G~i~t~~g~ 328 (770)
+|.+. .+.-... -..|.|+++|+ .|.|||++... |++++.+ +.+...++.
T Consensus 165 ~g~~~~~lVR~f~l--------------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 165 NGYISGKKVRAFKM--------------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp TSCEEEEEEEEEEC--------------------SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS
T ss_pred CCcccceEEEEecC--------------------CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecC
Confidence 33221 1110000 01588999996 68899999877 9999844 334333332
Q ss_pred CCCCCCcCCCccCCCccccccccc-CcceEEEeCC-C--CeEEEEe--CCEEEEEcCC
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQ-WPTGLALSPL-D--DSLHFID--DRVIFKLTND 380 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~-~P~gla~d~~-~--g~lyv~D--~~~I~~i~~~ 380 (770)
+ .|. .|.||++.+. + +.|++++ ++....++..
T Consensus 225 g--------------------~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 225 R--------------------HLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp S--------------------SBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred C--------------------ccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 2 133 6899999642 2 4699998 5677777653
No 165
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.48 E-value=0.12 Score=53.76 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=43.2
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-..+++.++|.++++-. +.|+.++. +|+....+. ..-.....++++| ++.++++-...+.|+.++
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV---GHKSDVMSVDIDK-KASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSCEEEEEETTSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc---cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 46788899998766543 57888875 466554442 1223457899997 677777766667777663
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.47 E-value=0.089 Score=60.78 Aligned_cols=201 Identities=17% Similarity=0.183 Sum_probs=107.7
Q ss_pred CceEEEEcCCCCEEEEe--C----ceEEEEcCCCcEEEEeccCccccc-------ceeEEEEe--CCCCc-EEEEeCCCc
Q psy4832 181 TPVALTSGPDGSLYVGD--F----NLVRRLTPEGNVFTVLQLSATQVS-------YQYYLALS--PADGH-LYISDAEKH 244 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d--~----~~I~~i~~~G~v~~~~~~~~~~~~-------~p~~lav~--p~~g~-lyvsd~~~~ 244 (770)
....+++++++-.|+.. . ..|.+...+|....+..... ... .+ ..++. |.+.. |+++.....
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~-~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPW-NVRNRVFEYSGF-PWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTC-CBCCCGGGTCCC-CEEEECCSSSSCEEEEEBTTTC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCc-cccccccccCCc-cceeeeecCCCeEEEEEECCCC
Confidence 34566777776666655 1 25666556666655543210 101 11 23343 75666 777776677
Q ss_pred EEEEEeccCCccCCC----CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCC--------
Q psy4832 245 QILRVLSLESVADPS----INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGT-------- 311 (770)
Q Consensus 245 ~I~~i~~~~~~~~~~----g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~-------- 311 (770)
+|+.++ .+ +....+...... ..-.....+++++||. |+++...
T Consensus 103 ~l~~~~-------~~~~g~~~~~~l~~~~~~-----------------~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 103 RLYAFE-------PDAPGGAVPRPLTPVSAV-----------------GGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEEC-------TTSTTCCCCEECSCCCCS-----------------TTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred eEEEEc-------CCCCCCCCCEeccCCccC-----------------CCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 888884 33 333332211000 0011355789999987 5554321
Q ss_pred ---CeEEECCCC-------cEEEee-cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe-C-------
Q psy4832 312 ---NIRVVSPEG-------IIHTLI-GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID-D------- 371 (770)
Q Consensus 312 ---~Ir~id~~G-------~i~t~~-g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D-~------- 371 (770)
.|+.++.++ ....+. ... .....++++| +|+ |+++. .
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~Sp-DG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDAH----------------------RFVTGPRLSP-DGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSCS----------------------SEECCCEECT-TSSEEEEEEECTTCCTTT
T ss_pred ceeEEEEEECCCCccccCCceeEEEecCC----------------------CcccCceECC-CCCEEEEEECCCCCCCCC
Confidence 277777554 333332 111 1344678899 775 65554 2
Q ss_pred -CEEEEEcCC--C---cEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEe
Q psy4832 372 -RVIFKLTND--L---KVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIAD 445 (770)
Q Consensus 372 -~~I~~i~~~--G---~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD 445 (770)
..|+.++.+ | ....+.... -..+..++++|+|.||++.
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~------------------------------------~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGP------------------------------------EEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEET------------------------------------TBCEEEEEECTTSCEEEEE
T ss_pred CcEEEEEEECCCCcccccEEeCCCC------------------------------------CceEcceEECCCCeEEEEE
Confidence 367777743 5 444443210 0236788999999977765
Q ss_pred CCCCceeeEEEEcC-CCcEEEee
Q psy4832 446 IDARKVNALRVIDS-TGRMFDFA 467 (770)
Q Consensus 446 ~~~~ri~~i~~i~~-~G~i~~~a 467 (770)
..... .+|..++. +|+...+.
T Consensus 260 ~~~~~-~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 260 DRTGW-WNLHRVDPATGAATQLC 281 (662)
T ss_dssp CTTSS-CEEEEECTTTCCEEESS
T ss_pred CCCCC-eEEEEEECCCCceeecc
Confidence 54442 25777776 56665543
No 167
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.45 E-value=0.035 Score=59.06 Aligned_cols=68 Identities=10% Similarity=0.003 Sum_probs=39.3
Q ss_pred ceEEEEcCCCCEEEEeC-ceEEEEcCC-CcEEEEeccC-cccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF-NLVRRLTPE-GNVFTVLQLS-ATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~-~~I~~i~~~-G~v~~~~~~~-~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.+|++.|++.++++.. +.|+.++.. ++...+.... ...-.....|+++| ++.++++-..++.|+.++
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 56889999999888766 467666532 3322111100 01123357899998 777777766667777774
No 168
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.44 E-value=0.075 Score=56.86 Aligned_cols=65 Identities=11% Similarity=0.088 Sum_probs=39.8
Q ss_pred ceEEEEcCCCCEEEEe-C-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGD-F-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d-~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.++++.|+|.++++- . +.|+.++. +++....+.. .......++++| ++.+.++-..++.|..++
T Consensus 69 V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~---h~~~v~~~~~s~-~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 69 VYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL---HCPWVMECAFAP-NGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC---CCTTCCCCEECT-TSSEEEECCSSSCCEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec---CCCCEEEEEECC-CCCEEEEeeCCCcEEEEE
Confidence 4678889988866543 3 47888875 3554444421 223356788987 677666665555554443
No 169
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.41 E-value=0.18 Score=53.25 Aligned_cols=222 Identities=14% Similarity=0.077 Sum_probs=118.4
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCCC--------cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPEG--------NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~G--------~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
....+++.|+|..+++-. +.|+.++... ....+.+ .......++++| ++..+++-...+.|+.++
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd 182 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM----HTNYLSACSFTN-SDMQILTASGDGTCALWD 182 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE----CSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec----cCCcEEEEEEeC-CCCEEEEEeCCCcEEEEe
Confidence 356889999999877654 3555554221 0111111 122346788887 555555655667777774
Q ss_pred ccCCccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc--CCcEEEE-eCCC-eEEECC-CCcE-E
Q psy4832 251 SLESVADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA--DKTMFIA-DGTN-IRVVSP-EGII-H 323 (770)
Q Consensus 251 ~~~~~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~--~G~lYva-D~~~-Ir~id~-~G~i-~ 323 (770)
. .++. +..+.+... ....+++.+ +|+++++ .... |+..|. .+.. .
T Consensus 183 ~------~~~~~~~~~~~h~~----------------------~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 183 V------ESGQLLQSFHGHGA----------------------DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp T------TTCCEEEEEECCSS----------------------CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred C------CCCeEEEEEcCCCC----------------------CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3 1232 223332111 123455544 4554444 3333 777764 3433 2
Q ss_pred EeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcCC-CcEEEEecCCCCCCCCCCCC
Q psy4832 324 TLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTND-LKVKIVAGIPLHCRTGDKDK 400 (770)
Q Consensus 324 t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~ 400 (770)
++.+. -.....++++| ++.++++- .+.|+.++.. +.........
T Consensus 235 ~~~~h----------------------~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~---------- 281 (354)
T 2pbi_B 235 AFETH----------------------ESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE---------- 281 (354)
T ss_dssp EECCC----------------------SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCT----------
T ss_pred EecCC----------------------CCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCC----------
Confidence 32221 11356899999 77766554 4667776643 2221111100
Q ss_pred ccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcC
Q psy4832 401 RDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCN 478 (770)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~ 478 (770)
........++++++|.++++-...+. |+..+. +|. +..+.+-
T Consensus 282 ------------------------~~~~~~~~~~~s~~g~~l~~g~~d~~---i~vwd~~~~~~~~~l~~h--------- 325 (354)
T 2pbi_B 282 ------------------------SIIFGASSVDFSLSGRLLFAGYNDYT---INVWDVLKGSRVSILFGH--------- 325 (354)
T ss_dssp ------------------------TCCSCEEEEEECTTSSEEEEEETTSC---EEEEETTTCSEEEEECCC---------
T ss_pred ------------------------CcccceeEEEEeCCCCEEEEEECCCc---EEEEECCCCceEEEEECC---------
Confidence 01123578999999997777665554 555553 444 3233221
Q ss_pred CCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEE
Q psy4832 479 TTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHIL 525 (770)
Q Consensus 479 ~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~ 525 (770)
-....+|+++|||..+++-...+.|+
T Consensus 326 ---------------------~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 326 ---------------------ENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp ---------------------SSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ---------------------CCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 12367899999998777655555554
No 170
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.39 E-value=0.51 Score=57.86 Aligned_cols=68 Identities=18% Similarity=0.141 Sum_probs=38.1
Q ss_pred ceEEEEcCCCC-EEEE-eC------ceEEEEcCCCcEEEEeccCccc----ccceeEEEEeCCCCcEEEEeC------CC
Q psy4832 182 PVALTSGPDGS-LYVG-DF------NLVRRLTPEGNVFTVLQLSATQ----VSYQYYLALSPADGHLYISDA------EK 243 (770)
Q Consensus 182 P~~la~~~dG~-lyv~-d~------~~I~~i~~~G~v~~~~~~~~~~----~~~p~~lav~p~~g~lyvsd~------~~ 243 (770)
...+++.|||. |.++ .. ..|+.++.++.....+...... ......++++| +|.++++.. ..
T Consensus 55 v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~Sp-Dg~ll~~~~~~~~~~~~ 133 (1045)
T 1k32_A 55 INNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDP-DGNLIISTDAMQPFSSM 133 (1045)
T ss_dssp EEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECT-TCCEEEEECTTSSSTTC
T ss_pred ccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCC-CCEEEEEECCcCCCccc
Confidence 35788999998 3333 21 2688888765443333210100 01126899998 666666544 23
Q ss_pred cEEEEEe
Q psy4832 244 HQILRVL 250 (770)
Q Consensus 244 ~~I~~i~ 250 (770)
.+|+.++
T Consensus 134 ~~l~~~~ 140 (1045)
T 1k32_A 134 TCLYRVE 140 (1045)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 5688774
No 171
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.39 E-value=0.066 Score=62.79 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=57.8
Q ss_pred CCCeEEECCCccEEecccCCCeEEEEeccCc----cCCccCCCCCcccccccccCceEEEEcCCCC-EEEEeCceEEEEc
Q psy4832 131 HEGILQKGDGSSLHLKHEFPRTVSVVMGTGL----QRPLVCKDCDGVARDARLLTPVALTSGPDGS-LYVGDFNLVRRLT 205 (770)
Q Consensus 131 ~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~----~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~-lyv~d~~~I~~i~ 205 (770)
...+...+||..+.+.. . ..|..+.-.+. ...+.. .-..+..+++.|||. |.++..+.|+.++
T Consensus 111 v~~~~~SpDg~~l~~~~-~-~~i~~~d~~~~~~~~~~~l~~----------~~~~~~~~~~SPDG~~la~~~~~~i~~~d 178 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPL-G-GELYLYDLKQEGKAAVRQLTH----------GEGFATDAKLSPKGGFVSFIRGRNLWVID 178 (741)
T ss_dssp SCCCEECTTSSEEEEEE-T-TEEEEEESSSCSTTSCCBCCC----------SSSCEEEEEECTTSSEEEEEETTEEEEEE
T ss_pred cceeEECCCCCEEEEEe-C-CcEEEEECCCCCcceEEEccc----------CCcccccccCCCCCCEEEEEeCCcEEEEe
Confidence 45677888998777665 3 66666654332 221110 012467899999998 5555556888888
Q ss_pred CCC-cEEEEeccCcc-------------cccceeEEEEeCCCCcEEEEeC
Q psy4832 206 PEG-NVFTVLQLSAT-------------QVSYQYYLALSPADGHLYISDA 241 (770)
Q Consensus 206 ~~G-~v~~~~~~~~~-------------~~~~p~~lav~p~~g~lyvsd~ 241 (770)
.++ +...+...... .+..+..++++|.+..|+++..
T Consensus 179 ~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 179 LASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp TTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred cCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 764 44433321111 0112578999996556777643
No 172
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.39 E-value=0.33 Score=55.60 Aligned_cols=100 Identities=8% Similarity=0.085 Sum_probs=51.9
Q ss_pred CceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCeeEEEE--EeCCCCeEEEEEEccCCcEeEEEecCcEE-EEEeCCC
Q psy4832 647 RFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQVTHI--YSPRYGKLISLVYDERGFLIFAQMFRHKY-YIATDQC 723 (770)
Q Consensus 647 g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~~~~~--~~p~~g~~~~~~yd~~G~l~~~~~~~~~~-~~~~d~~ 723 (770)
+....-.+.+.|++++.-..++.+.-|...... ++... ...-.+.+....+.+.|+.++.-..+.+. .+-.+..
T Consensus 492 ~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~---~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNF---ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT---EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCT
T ss_pred CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC---ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCc
Confidence 334445566667777666666655444433211 11110 00014567788888888877766444333 3333322
Q ss_pred CCeE-EEEcCC-CCEEEEEEeCCCCceE
Q psy4832 724 GTPV-MVFNQY-GETVREIMRSPYGHIV 749 (770)
Q Consensus 724 G~~~-~~~d~~-G~~v~~~~yd~~G~~~ 749 (770)
.... .+.... ...|..+...|-|+++
T Consensus 569 ~~~~~~~~~~h~~~~v~~v~fs~d~~l~ 596 (611)
T 1nr0_A 569 SDHPIIIKGAHAMSSVNSVIWLNETTIV 596 (611)
T ss_dssp TSCCEEETTSSTTSCEEEEEEEETTEEE
T ss_pred ccccchhhccCcccCeeEEEEcCCCEEE
Confidence 2222 344444 3457777776777744
No 173
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.37 E-value=0.22 Score=53.34 Aligned_cols=151 Identities=15% Similarity=0.015 Sum_probs=83.4
Q ss_pred eecCCCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEe-C-ceEEEEc
Q psy4832 128 YNFHEGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGD-F-NLVRRLT 205 (770)
Q Consensus 128 ~~~~~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d-~-~~I~~i~ 205 (770)
++....+.+..+|..++... ..+.|....-....... ... .. ......++.++|.++++- . +.|+.++
T Consensus 56 ~~~~~~~~~s~~g~~l~~~~-~d~~v~i~d~~~~~~~~-~~~------~~--~~~~~~~~~~~~~~l~~~~~dg~i~iwd 125 (420)
T 3vl1_A 56 VDAGKGNTFEKVGSHLYKAR-LDGHDFLFNTIIRDGSK-MLK------RA--DYTAVDTAKLQMRRFILGTTEGDIKVLD 125 (420)
T ss_dssp CBCCTTCEEEEEETTEEEEE-ETTEEEEEECCSEETTT-TSC------SC--CEEEEEEECSSSCEEEEEETTSCEEEEC
T ss_pred cccccceeeeecCCeEEEEE-cCCcEEEEEecccceee-EEe------cC--CceEEEEEecCCCEEEEEECCCCEEEEe
Confidence 34566788888888777766 56666666532111100 000 00 112333566788766543 3 4788887
Q ss_pred CC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCc
Q psy4832 206 PE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNG 284 (770)
Q Consensus 206 ~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g 284 (770)
.. ++....+. ........++++| ++.++++-..++.|+.++... ...+..+.+.
T Consensus 126 ~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~-----~~~~~~~~~h---------------- 180 (420)
T 3vl1_A 126 SNFNLQREIDQ---AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKD-----GSNPRTLIGH---------------- 180 (420)
T ss_dssp TTSCEEEEETT---SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT-----CCCCEEEECC----------------
T ss_pred CCCcceeeecc---cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCC-----CcCceEEcCC----------------
Confidence 65 44444432 2334568999998 666666666677887775321 1112222211
Q ss_pred ccccccccCcceEEEccCCcEEEE-eCCC-eEEECCC
Q psy4832 285 PALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPE 319 (770)
Q Consensus 285 ~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~ 319 (770)
-.....|++.+++.++++ .... |+..|..
T Consensus 181 ------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 181 ------RATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp ------SSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ------CCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 113467888888875544 3333 7777743
No 174
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.35 E-value=0.21 Score=52.52 Aligned_cols=67 Identities=21% Similarity=0.092 Sum_probs=38.4
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCCCc-EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPEGN-VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~G~-v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
-..|++.|+|.++++-. +.|+.++.++. .................++++| ++.++++-..++.|...
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIW 88 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEE
Confidence 46799999998776543 46777765433 2211111012223457899998 66666665555555444
No 175
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.35 E-value=0.16 Score=54.37 Aligned_cols=151 Identities=11% Similarity=0.110 Sum_probs=83.9
Q ss_pred CceEEEEcC-CCCEEEEeC--ceEEEEcCC-C-------cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 181 TPVALTSGP-DGSLYVGDF--NLVRRLTPE-G-------NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 181 ~P~~la~~~-dG~lyv~d~--~~I~~i~~~-G-------~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
...++++.| +++++++-. +.|+.++.. + +....+. ..-.....++++|.+.+++++-..++.|+.+
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE---GHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE---CCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec---CCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 457899999 888766543 467777643 3 1122221 1224467899998444677776666777777
Q ss_pred eccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEE-EEeCCC-eEEECCC-CcEEEee
Q psy4832 250 LSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMF-IADGTN-IRVVSPE-GIIHTLI 326 (770)
Q Consensus 250 ~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lY-vaD~~~-Ir~id~~-G~i~t~~ 326 (770)
+. .++......... ..-.....|+++++|.++ .+.... |+..|.. +.....+
T Consensus 160 d~------~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 160 DV------GTGAAVLTLGPD-------------------VHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp ET------TTTEEEEEECTT-------------------TCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EC------CCCCccEEEecC-------------------CCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 42 223322222100 001135688999888744 444444 8888854 4433322
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-----CCEEEEEcC
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-----DRVIFKLTN 379 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-----~~~I~~i~~ 379 (770)
..... -..+..++++| ++.++++- ++.|..++.
T Consensus 215 ~~~~~-------------------~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 215 DRPHE-------------------GTRPVHAVFVS-EGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp ECSSC-------------------SSSCCEEEECS-TTEEEEEEECTTCCEEEEEEET
T ss_pred ccCCC-------------------CCcceEEEEcC-CCcEEEEeccCCCCceEEEEcC
Confidence 11100 01356789998 88766653 456666664
No 176
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.059 Score=57.75 Aligned_cols=67 Identities=9% Similarity=0.036 Sum_probs=43.9
Q ss_pred CceEEEEcCCCCEEEE-eC-ceEEEEcCCC-----cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVG-DF-NLVRRLTPEG-----NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~-d~-~~I~~i~~~G-----~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
...++++.|+|.++++ .. +.|+.++.+. +....+. ..-.....++++|.++.++++-..++.|+.++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS---NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC---CSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc---CCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 4678999999875554 33 5788777554 2333332 12234578999985477777777777777764
No 177
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.32 E-value=0.19 Score=53.39 Aligned_cols=68 Identities=15% Similarity=0.217 Sum_probs=43.2
Q ss_pred CeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEE-EeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEE
Q psy4832 429 SLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMF-DFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISAL 506 (770)
Q Consensus 429 ~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~-~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gi 506 (770)
...+|+++|+|.++++-...+. |+..|. +++.. ++.. + .-....+|
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~---V~iwd~~~~~~~~~~~~-g----------------------------H~~~V~~v 318 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNS---IALVKLKDLSMSKIFKQ-A----------------------------HSFAITEV 318 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSC---EEEEETTTTEEEEEETT-S----------------------------SSSCEEEE
T ss_pred CeEeEEECCCCCceEEEcCCCE---EEEEECCCCcEEEEecC-c----------------------------ccCCEEEE
Confidence 3588999999997776555543 666664 55532 2211 0 01236789
Q ss_pred EEcCCCcEEEEcCCCceEEeee
Q psy4832 507 SVSPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 507 av~~dG~lyvaD~~~~~I~~i~ 528 (770)
+++|||.++++-...+.|+...
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEE
Confidence 9999999888765555554443
No 178
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.29 E-value=0.5 Score=55.64 Aligned_cols=104 Identities=11% Similarity=-0.014 Sum_probs=57.5
Q ss_pred CeEEECCCccEEecccCCCeEEEEec-cCccCCccCCCCCcccccccccCceEEEEcCCCCEEEE-eC-ceEEEEcC-CC
Q psy4832 133 GILQKGDGSSLHLKHEFPRTVSVVMG-TGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVG-DF-NLVRRLTP-EG 208 (770)
Q Consensus 133 gil~~~dG~~~~~~~~~~~~i~~v~g-~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~-d~-~~I~~i~~-~G 208 (770)
++...+||..+.+.. ..+.|.+..- +|..... ....-....++++.|+|..+++ .. +.|+.++. +|
T Consensus 18 ~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRS---------IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEE---------EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred EEEECCCCCEEEEEe-CCCEEEEEECCCCceEEE---------EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 445556665555544 5555655542 2221100 0001123578899999885553 33 57888874 46
Q ss_pred cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 209 NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+....+. ........++++| ++...++-..++.|..++
T Consensus 88 ~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 88 EKVVDFE---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp CEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred cEEEEEe---cCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEE
Confidence 6655442 2234568899998 555555555566777664
No 179
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.28 E-value=0.35 Score=57.00 Aligned_cols=244 Identities=12% Similarity=0.129 Sum_probs=132.7
Q ss_pred CceEEEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcc-cc--cceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSAT-QV--SYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~-~~--~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
....|+.|++|.|||+..+-|.++++.......+..... .+ .....|..+..++.|||... +-+.+++.
T Consensus 147 ~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~~~------ 218 (758)
T 3ott_A 147 TIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--GYLFQYFP------ 218 (758)
T ss_dssp CEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--EEEEEEET------
T ss_pred eEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--CCCeEEcC------
Confidence 457889999999999987788889876543333322111 11 12457888853456899763 46888842
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCCeEEECCC-CcEEEeecCCCCCCCcC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTNIRVVSPE-GIIHTLIGHHKHHNIWS 336 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~Ir~id~~-G~i~t~~g~~~~~~~~~ 336 (770)
..+.+..+... .-.....|+.|++|.|||+-...+.++++. +.+..+.......
T Consensus 219 ~~~~~~~~~~l---------------------~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~~~~~~~~~~~~~---- 273 (758)
T 3ott_A 219 STGQIKQTEAF---------------------HNNSIKSLALDGNGDLLAGTDNGLYVYHNDTTPLQHIIHDSRNI---- 273 (758)
T ss_dssp TTTEEEEEEEE---------------------EEEEEEEEEECTTCCEEEEETTEEEEECCTTSCCEEECCCTTCT----
T ss_pred CCCeEEeccCC---------------------CCCeEEEEEEcCCCCEEEEeCCceeEEecCCCcEEEEEcCCCCc----
Confidence 12333222100 001246788999999999874348888865 3454433211100
Q ss_pred CCccCCCcccccccccCcceEEEeCCCCeEEEEeCCEEEEEcCCCcEEEEecCCCCCCCCCCCCcccccccccccccccc
Q psy4832 337 PFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVIFKLTNDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQ 416 (770)
Q Consensus 337 p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I~~i~~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (770)
. ...-+....|..|. +|+|||...+-|..+..+.....+.-.....
T Consensus 274 -----~-----~l~~~~i~~i~~D~-~g~lWiGT~~Gl~~~~~~~~~~~~~~~~~~~----------------------- 319 (758)
T 3ott_A 274 -----Q-----SLTNNIIWNIFADQ-EHNIWLGTDYGISLSRYNSALQFIPISQITG----------------------- 319 (758)
T ss_dssp -----T-----SCSCSCEEEEEECT-TCCEEEEESSSEEEECCCC-CEEEEHHHHSC-----------------------
T ss_pred -----C-----cCCcCeEEEEEEcC-CCCEEEEeCCcccccccCCceeEEecccCCC-----------------------
Confidence 0 00012346788898 9999998743355444333332221000000
Q ss_pred CCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCC-C---cEEEeecCccCCCCCcCCCCCcccccCccCc
Q psy4832 417 DDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDST-G---RMFDFAGRWQSDKKNCNTTNCAEFEKNSKET 492 (770)
Q Consensus 417 ~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~-G---~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~ 492 (770)
...-....+|..|.+|.|||... +. +.++++. + .+..+.-.. ...
T Consensus 320 -------~~~~~~v~~i~~D~~g~lWiGt~-~G----l~~~~~~~~~~~~~~~~~~~~-------------------~~~ 368 (758)
T 3ott_A 320 -------TGDGNQFYSLFRDSKGFYWFGGA-NG----LIRFTDPAGERHDAIWYRMGD-------------------KTY 368 (758)
T ss_dssp -------SCCCCBEEEEEECTTCCEEEEET-TE----EEEESCTTSSCCCCEEECTTC-------------------SSS
T ss_pred -------CCCCceEEEEEEcCCCCEEEeeC-Cc----ceeecccccccceeEEeccCC-------------------cCC
Confidence 00012357899999999999964 32 4455532 2 122221000 000
Q ss_pred ccccceecCCeeEEEEcCCCcEEEEcCCCceEEeee
Q psy4832 493 LLTSTARFTSISALSVSPDGVVNVADQGSLHILALQ 528 (770)
Q Consensus 493 ~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i~ 528 (770)
.+ .-+...+|+.+++|.|||+..+ .+.++.
T Consensus 369 ~l----~~~~v~~i~~d~~g~lWigt~~--GL~~~~ 398 (758)
T 3ott_A 369 PL----SHNRIRHIYEDKEQQLWIATDG--SINRYD 398 (758)
T ss_dssp CC----SCSCEEEEEECTTSCEEEEETT--EEEEEE
T ss_pred CC----CCCceEEEEECCCCCEEEEeCC--cHhhcC
Confidence 00 1134678999999999998632 444444
No 180
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.24 E-value=0.0033 Score=71.34 Aligned_cols=124 Identities=22% Similarity=0.252 Sum_probs=77.6
Q ss_pred ccccCcceEEEeCCCCeEEEEeC-----------------------CEEEEEcCCCc----------EEEEecCCCCCCC
Q psy4832 349 AQLQWPTGLALSPLDDSLHFIDD-----------------------RVIFKLTNDLK----------VKIVAGIPLHCRT 395 (770)
Q Consensus 349 ~~l~~P~gla~d~~~g~lyv~D~-----------------------~~I~~i~~~G~----------v~~vaG~~~~~~~ 395 (770)
..|..|.+++++|.++.|||+-+ +.|+++.+++. +.++.|.|.....
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 46889999999998899999851 46888875321 2234444332110
Q ss_pred CCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCC---------ceeeEEEEcC-CCcEEE
Q psy4832 396 GDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDAR---------KVNALRVIDS-TGRMFD 465 (770)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~---------ri~~i~~i~~-~G~i~~ 465 (770)
.. ............|..|.+|+||+.|+|||++-.+. --|.+...++ .|++..
T Consensus 461 ~~-----------------~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r 523 (592)
T 3zwu_A 461 TP-----------------KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR 523 (592)
T ss_dssp SG-----------------GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE
T ss_pred cc-----------------cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEE
Confidence 00 00011122345689999999999999999987542 1234566665 577777
Q ss_pred eecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC-cEEEE
Q psy4832 466 FAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG-VVNVA 517 (770)
Q Consensus 466 ~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG-~lyva 517 (770)
|+-.+.. .-..|++++||| .|||.
T Consensus 524 f~~~P~g----------------------------aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 524 FMVGPIG----------------------------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECCTT----------------------------CEEEEEEECTTSSEEEEE
T ss_pred EEeCCCC----------------------------ccCcCeeECCCCCEEEEE
Confidence 7643310 126789999998 56665
No 181
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.21 E-value=0.31 Score=51.64 Aligned_cols=147 Identities=7% Similarity=0.002 Sum_probs=85.5
Q ss_pred CceEEEEcC-CCCEEEE-eC-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGP-DGSLYVG-DF-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~-dG~lyv~-d~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...++++.| ++.++++ .. +.|+.++..+.....+......-.....++++| ++.++++-..++.|+.++
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d------- 191 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLG------- 191 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEE-------
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEE-------
Confidence 457888988 5565554 33 578888877665554432222224467999998 666666666677888874
Q ss_pred CCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEe-CCC-eEEECCC-----CcEEEeecC
Q psy4832 258 PSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIAD-GTN-IRVVSPE-----GIIHTLIGH 328 (770)
Q Consensus 258 ~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD-~~~-Ir~id~~-----G~i~t~~g~ 328 (770)
.++. +..+.+. -.....|++.+++. ++++- ... |+..|.. +.+....+.
T Consensus 192 ~~~~~~~~~~~h----------------------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (383)
T 3ei3_B 192 LDGHEIFKEKLH----------------------KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH 249 (383)
T ss_dssp TTSCEEEEEECS----------------------SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC
T ss_pred CCCCEEEEeccC----------------------CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC
Confidence 3333 2222211 12356899999887 55543 333 7766632 333333321
Q ss_pred CCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe-CCEEEEEcC
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID-DRVIFKLTN 379 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D-~~~I~~i~~ 379 (770)
-.....++++|.++. |+.+. ++.|+.++.
T Consensus 250 ----------------------~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 250 ----------------------EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ----------------------SSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ----------------------CCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 124568899884444 44444 467777773
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.20 E-value=0.28 Score=57.07 Aligned_cols=242 Identities=16% Similarity=0.151 Sum_probs=125.0
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...++++.|+|.+.++-. +.|+.++.. +.....+. ........++++| ++...++-..++.|+.++
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd------- 500 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV---GHTKDVLSVAFSL-DNRQIVSASRDRTIKLWN------- 500 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSSCEEEEETTSCEEEEC-------
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe---CCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEE-------
Confidence 356889999999776543 578888754 55444432 1223457899998 666666666667777773
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCC--cEEE-EeCCC-eEEECCC-CcEE-EeecCCCC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADK--TMFI-ADGTN-IRVVSPE-GIIH-TLIGHHKH 331 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G--~lYv-aD~~~-Ir~id~~-G~i~-t~~g~~~~ 331 (770)
..+........... ..-.....+++.+++ .+++ +.... |+..|.. +... ++.+..
T Consensus 501 ~~~~~~~~~~~~~~-----------------~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-- 561 (694)
T 3dm0_A 501 TLGECKYTISEGGE-----------------GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT-- 561 (694)
T ss_dssp TTSCEEEEECSSTT-----------------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS--
T ss_pred CCCCcceeeccCCC-----------------CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC--
Confidence 33322221111000 011124567787765 2333 33333 7777643 3333 332221
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
.....|+++| ++.++++- .+.|+..+. +++...... .
T Consensus 562 --------------------~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~----------------- 601 (694)
T 3dm0_A 562 --------------------GYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLE--A----------------- 601 (694)
T ss_dssp --------------------SCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCB--C-----------------
T ss_pred --------------------CCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEec--C-----------------
Confidence 1356899999 88776654 466666663 343211110 0
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEE-EeecCccCCCCCcCCCCCcccc
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMF-DFAGRWQSDKKNCNTTNCAEFE 486 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~-~~aG~~~~~~~~~~~~~~~~~~ 486 (770)
-.....++++|++.++++-..+. |+..+. ++.+. .+.......... +.
T Consensus 602 ------------------~~~v~~~~~sp~~~~l~~~~~~~----i~iwd~~~~~~~~~~~~~~~~~~~~-----~~--- 651 (694)
T 3dm0_A 602 ------------------NSVIHALCFSPNRYWLCAATEHG----IKIWDLESKSIVEDLKVDLKAEAEK-----AD--- 651 (694)
T ss_dssp ------------------SSCEEEEEECSSSSEEEEEETTE----EEEEETTTTEEEEEECCCCC---------------
T ss_pred ------------------CCcEEEEEEcCCCcEEEEEcCCC----EEEEECCCCCChhhhcccccccccc-----cc---
Confidence 02357899999998777765542 555554 33332 222111000000 00
Q ss_pred cCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEE
Q psy4832 487 KNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHIL 525 (770)
Q Consensus 487 ~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~ 525 (770)
...............+|+++|+|..+++-...+.|+
T Consensus 652 ---~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 652 ---NSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp ------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ---ccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 000000111122356899999998888765555554
No 183
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.19 E-value=0.27 Score=50.53 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=83.3
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...+|++.|+|.+.++-. +.|+.++.. +.....+.. .-.....+++.| ++++.++-...+.|+.++.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~---~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~------ 84 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV---TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNY------ 84 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEEEG-GGTEEEEEETTSEEEEEET------
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec---cCCcEEEEEEeC-CCCEEEEECCCCEEEEEEC------
Confidence 357899999998666543 578888754 544444321 112346788987 6777777667788887753
Q ss_pred CCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-C-eEEECCC-C-cEEE-eecCCCC
Q psy4832 258 PSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-N-IRVVSPE-G-IIHT-LIGHHKH 331 (770)
Q Consensus 258 ~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~-Ir~id~~-G-~i~t-~~g~~~~ 331 (770)
.++.. ..+.+. -.....|++.+++.+.++-+. . |+..|.. + .+.. +.+..
T Consensus 85 ~~~~~~~~~~~h----------------------~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~-- 140 (304)
T 2ynn_A 85 NTGEKVVDFEAH----------------------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE-- 140 (304)
T ss_dssp TTCCEEEEEECC----------------------SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC--
T ss_pred CCCcEEEEEeCC----------------------CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC--
Confidence 12322 222221 113458899998886655433 3 7777643 2 2322 22211
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN 379 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~ 379 (770)
.....++++|.++.++++- .+.|+..+.
T Consensus 141 --------------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 141 --------------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp --------------------SCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred --------------------CcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 1346789998455655543 456666653
No 184
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.17 E-value=0.28 Score=50.34 Aligned_cols=146 Identities=16% Similarity=0.208 Sum_probs=80.4
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccC
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKAD 302 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~ 302 (770)
....++++| ++.++++-..++.|+.++. .++........ .-.....|++.++
T Consensus 25 ~v~~~~~s~-~~~~l~s~~~dg~i~iw~~------~~~~~~~~~~~---------------------h~~~v~~~~~~~~ 76 (312)
T 4ery_A 25 AVSSVKFSP-NGEWLASSSADKLIKIWGA------YDGKFEKTISG---------------------HKLGISDVAWSSD 76 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET------TTCCEEEEECC---------------------CSSCEEEEEECTT
T ss_pred cEEEEEECC-CCCEEEEeeCCCeEEEEeC------CCcccchhhcc---------------------CCCceEEEEEcCC
Confidence 357888987 6666666555566666642 23333222210 0112457899998
Q ss_pred CcEEEEeC-CC-eEEECCC-Cc-EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEE
Q psy4832 303 KTMFIADG-TN-IRVVSPE-GI-IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFK 376 (770)
Q Consensus 303 G~lYvaD~-~~-Ir~id~~-G~-i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~ 376 (770)
+++.++-. .. |+..+.. +. +.++.+.. .....++++| +++++++- ++.|+.
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----------------------~~v~~~~~~~-~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS----------------------NYVFCCNFNP-QSNLIVSGSFDESVRI 133 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCS----------------------SCEEEEEECS-SSSEEEEEETTSCEEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCC----------------------CCEEEEEEcC-CCCEEEEEeCCCcEEE
Confidence 88665543 33 7777643 33 33333221 1245788888 76655543 466777
Q ss_pred EcC-CCcEE-EEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeE
Q psy4832 377 LTN-DLKVK-IVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNAL 454 (770)
Q Consensus 377 i~~-~G~v~-~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i 454 (770)
++. +++.. .+.+. -.....++++++|.++++-...+. |
T Consensus 134 wd~~~~~~~~~~~~~-------------------------------------~~~v~~~~~~~~~~~l~~~~~d~~---i 173 (312)
T 4ery_A 134 WDVKTGKCLKTLPAH-------------------------------------SDPVSAVHFNRDGSLIVSSSYDGL---C 173 (312)
T ss_dssp EETTTCCEEEEECCC-------------------------------------SSCEEEEEECTTSSEEEEEETTSC---E
T ss_pred EECCCCEEEEEecCC-------------------------------------CCcEEEEEEcCCCCEEEEEeCCCc---E
Confidence 773 34322 22110 022578999999987666655543 5
Q ss_pred EEEcC
Q psy4832 455 RVIDS 459 (770)
Q Consensus 455 ~~i~~ 459 (770)
+..+.
T Consensus 174 ~~wd~ 178 (312)
T 4ery_A 174 RIWDT 178 (312)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 55553
No 185
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.27 Score=49.91 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCEEE-EeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYV-GDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv-~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..++++ +++.+++ +.. +.|+.++.+ +.....+. ..-.....++++| ++.++++-..++.|..++
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY---TGQGFLNSVCYDS-EKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE---ECSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee---cCCccEEEEEECC-CCCEEEEecCCCeEEEEE
Confidence 356677 6665444 333 466666643 44444442 1234567899998 666655555566666553
No 186
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.15 E-value=0.62 Score=54.01 Aligned_cols=109 Identities=8% Similarity=0.011 Sum_probs=58.2
Q ss_pred cceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 222 SYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 222 ~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
..+..++++|. +.+.++.. +.|+.++. .++....+.... ..+..++++|
T Consensus 82 ~~v~~~~~spd-~~~~~~~~--~~i~~~d~------~~~~~~~l~~~~----------------------~~~~~~~~Sp 130 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQ--GGLVGFDM------LARKVTYLFDTN----------------------EETASLDFSP 130 (706)
T ss_dssp CCCEEEEETTT-TEEEEEET--TEEEEEET------TTTEEEEEECCT----------------------TCCTTCEECT
T ss_pred cCceeEEECCC-CeEEEEEC--CEEEEEEC------CCCceEEccCCc----------------------ccccCCcCCC
Confidence 35789999985 77777643 67877742 234443333211 0244677888
Q ss_pred CCc-EEEEeCCCeEEECCC------CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEE
Q psy4832 302 DKT-MFIADGTNIRVVSPE------GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFI 369 (770)
Q Consensus 302 ~G~-lYvaD~~~Ir~id~~------G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~ 369 (770)
+|. |+++...+|+.++.+ |....+...+... .. .+.+..+..+..+.+++++| +|+ |+++
T Consensus 131 dG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~-----~~--~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~ 198 (706)
T 2z3z_A 131 VGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTET-----LV--YGQAVHQREFGIEKGTFWSP-KGSCLAFY 198 (706)
T ss_dssp TSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTT-----EE--ESSCCGGGCTTCCCSEEECT-TSSEEEEE
T ss_pred CCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCC-----eE--cccchhhhhcCCCceEEECC-CCCEEEEE
Confidence 886 444444447776643 4444333221110 00 00112223356678999999 775 5554
No 187
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.12 E-value=0.069 Score=53.66 Aligned_cols=147 Identities=19% Similarity=0.120 Sum_probs=82.5
Q ss_pred CceEEEEcCCCCEEE-EeCceEEEEcCCC--cEEEEeccCcccccceeEEEEeCCCCcEEEEeC---CCcEEEEEeccCC
Q psy4832 181 TPVALTSGPDGSLYV-GDFNLVRRLTPEG--NVFTVLQLSATQVSYQYYLALSPADGHLYISDA---EKHQILRVLSLES 254 (770)
Q Consensus 181 ~P~~la~~~dG~lyv-~d~~~I~~i~~~G--~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~---~~~~I~~i~~~~~ 254 (770)
...++++.|+|..++ +..+.|+.++.++ +...+.. .........++++|.+..|+++.. ...+|+.++..
T Consensus 43 ~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~-- 118 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDT--GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST-- 118 (297)
T ss_dssp CCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCC--TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT--
T ss_pred ceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecc--ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC--
Confidence 356789999998544 4446888888654 4444332 111234578999985555666553 24678877421
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEe-CCC---eEEECCC-CcEEEeecC
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIAD-GTN---IRVVSPE-GIIHTLIGH 328 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD-~~~---Ir~id~~-G~i~t~~g~ 328 (770)
.+....+.. ......+++.++|. |+++. ... |+.++.+ +....+...
T Consensus 119 ----~~~~~~~~~-----------------------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 119 ----GGTPRLMTK-----------------------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp ----CCCCEECCS-----------------------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred ----CCceEEeec-----------------------CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 122211110 01245678888887 55443 222 6666554 444443321
Q ss_pred CCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe----CCEEEEEcCCC
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID----DRVIFKLTNDL 381 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D----~~~I~~i~~~G 381 (770)
-..+..++++| ++. |+++. ..+|+.++.++
T Consensus 172 ----------------------~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 172 ----------------------EGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp ----------------------SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTS
T ss_pred ----------------------CCccccceECC-CCCEEEEEecCCCCccEEEECCCC
Confidence 12356889999 775 66553 25788877443
No 188
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.11 E-value=0.26 Score=53.62 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=65.8
Q ss_pred ceEEEEcC-CCCEE-EEeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 182 PVALTSGP-DGSLY-VGDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 182 P~~la~~~-dG~ly-v~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
-.+|++.| ++++. ++.. +.|+.++.+ +....++.. ...-..-..|+++|.++.++++-..++.|+.++
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd------- 193 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD------- 193 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE-------
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee-------
Confidence 57899998 55544 4444 578888754 333332221 111223578999987888888888778887774
Q ss_pred CCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-C-eEEECCCC
Q psy4832 258 PSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-N-IRVVSPEG 320 (770)
Q Consensus 258 ~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~-Ir~id~~G 320 (770)
..+. ...+...... -.....+++++++.++++-.. . |+..|.++
T Consensus 194 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 194 FKGNILRVFASSDTI-------------------NIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp TTSCEEEEEECCSSC-------------------SCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred ccCCceeEEeccCCC-------------------CccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 3333 3333321110 112357888888886665433 2 77777665
No 189
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.09 E-value=0.43 Score=51.04 Aligned_cols=151 Identities=16% Similarity=0.177 Sum_probs=83.6
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
..++++.|+|.++++-. +.|+.++.. ++....+. ..-.....++++| ++..+++-..++.|+.++. .
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~------~ 195 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ---GHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDL------R 195 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEET------T
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc---cCCCCEEEEEEcC-CCCEEEEecCCCcEEEEEC------C
Confidence 46899999998766533 578888754 55555442 2233467899998 6666666666778877742 1
Q ss_pred CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEEEeC-CC-eEEECCC-CcEEEeecCCCCCCC
Q psy4832 259 SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFIADG-TN-IRVVSPE-GIIHTLIGHHKHHNI 334 (770)
Q Consensus 259 ~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYvaD~-~~-Ir~id~~-G~i~t~~g~~~~~~~ 334 (770)
++........ -.....+++.+ +|.++++-. .. |+..|.. +............
T Consensus 196 ~~~~~~~~~~----------------------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~-- 251 (393)
T 1erj_A 196 TGQCSLTLSI----------------------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES-- 251 (393)
T ss_dssp TTEEEEEEEC----------------------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------
T ss_pred CCeeEEEEEc----------------------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccC--
Confidence 2332221110 01245677877 777555533 23 7777743 4433222110000
Q ss_pred cCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC
Q psy4832 335 WSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN 379 (770)
Q Consensus 335 ~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~ 379 (770)
....-.....|+++| ++.++++- .+.|+..+.
T Consensus 252 ------------~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 252 ------------GTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp -------------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC
T ss_pred ------------CCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEEC
Confidence 001122457899999 77755543 466666653
No 190
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.08 E-value=0.057 Score=57.60 Aligned_cols=186 Identities=16% Similarity=0.134 Sum_probs=102.3
Q ss_pred CceEEEEcCCCCEE-EEeC---ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 181 TPVALTSGPDGSLY-VGDF---NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 181 ~P~~la~~~dG~ly-v~d~---~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
....+++.|||.+. ++.. +.|+.++.. ++....+.. -.....|+++| +|.++++-.. ..+.++.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~----~~~V~~v~fsp-dg~~l~s~s~-~~~~~~~----- 203 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET----RGEVKDLHFST-DGKVVAYITG-SSLEVIS----- 203 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC----SSCCCEEEECT-TSSEEEEECS-SCEEEEE-----
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC----CCceEEEEEcc-CCceEEeccc-eeEEEEE-----
Confidence 35789999999865 4442 478888854 555544432 12357899998 7777766654 3455553
Q ss_pred cCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe---CCC---eEEECCC-CcEEEeecC
Q psy4832 256 ADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD---GTN---IRVVSPE-GIIHTLIGH 328 (770)
Q Consensus 256 ~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD---~~~---Ir~id~~-G~i~t~~g~ 328 (770)
..++......-... .-.....+++.++|..+++- ... |+..+.. +........
T Consensus 204 -~~~~~~~~~~~~~~-------------------~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 204 -TVTGSCIARKTDFD-------------------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp -TTTCCEEEEECCCC-------------------TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred -eccCcceeeeecCC-------------------CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee
Confidence 23333221110000 00124578899998866542 221 4444422 211110000
Q ss_pred CCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEc-CCCcEE-EEecCCCCCCCCCCCCcccc
Q psy4832 329 HKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLT-NDLKVK-IVAGIPLHCRTGDKDKRDFK 404 (770)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~-~~G~v~-~vaG~~~~~~~~~~~~~~~~ 404 (770)
. ........+.|+++| +|.+.++- .+.|+.++ .+++.. .+.. .|
T Consensus 264 ~-----------------~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~--gH------------ 311 (365)
T 4h5i_A 264 Q-----------------VTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQ--AH------------ 311 (365)
T ss_dssp E-----------------EESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETT--SS------------
T ss_pred e-----------------ecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecC--cc------------
Confidence 0 000122356899999 88876654 46777777 345532 2221 01
Q ss_pred ccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCce
Q psy4832 405 DKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKV 451 (770)
Q Consensus 405 ~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri 451 (770)
-....+|+|+|+|.++++-+..+.|
T Consensus 312 ----------------------~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 312 ----------------------SFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp ----------------------SSCEEEEEECTTSCEEEEEETTSEE
T ss_pred ----------------------cCCEEEEEECCCCCEEEEEeCCCeE
Confidence 1236899999999988887766643
No 191
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.03 E-value=0.013 Score=62.21 Aligned_cols=63 Identities=10% Similarity=0.104 Sum_probs=35.2
Q ss_pred eEEEEcCCCCEEEEeC--ceEEEEcCCCc---EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 183 VALTSGPDGSLYVGDF--NLVRRLTPEGN---VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~--~~I~~i~~~G~---v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
.++++.|+|.++++-. +.|+.++.+.. ....+ ...-.....++++| ++.++++-..++.|+.+
T Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF---SDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp SCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB---CCCSSCEEEEEECT-TTCCEEEEETTSSEEEC
T ss_pred EEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE---ecCCceEEEEEEeC-CCCEEEEEeCCCeEEEE
Confidence 4577888888666542 45555554332 22222 11223457899998 55555555555566555
No 192
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.02 E-value=0.49 Score=50.61 Aligned_cols=226 Identities=15% Similarity=0.089 Sum_probs=121.8
Q ss_pred CceEEEEcCCCCEEEE-eC-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVG-DF-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~-d~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...++++.|+|.++++ .. +.|+.++. +++....+. ..-.....++++ +.++++-..++.|..++...
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~---- 205 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA---GHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRI---- 205 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTS----
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec---CCCCceEEEEEC---CCEEEEEcCCCCEEEEeccc----
Confidence 3578899999876554 33 47777774 355555442 122334567775 34555555667777774310
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CCC-eEEECCC-CcE-EEeecCCCCCC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GTN-IRVVSPE-GII-HTLIGHHKHHN 333 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~~-Ir~id~~-G~i-~t~~g~~~~~~ 333 (770)
.......+.+. -....++++.+++.++++- ..+ |+..|.. +.. .++.+.
T Consensus 206 ~~~~~~~~~~~----------------------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~----- 258 (401)
T 4aez_A 206 ANHQIGTLQGH----------------------SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH----- 258 (401)
T ss_dssp SSCEEEEEECC----------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC-----
T ss_pred CcceeeEEcCC----------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC-----
Confidence 11112222221 1135688999888755553 333 7777754 332 222221
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe----CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID----DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D----~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
-.....++++|.+..++++. ++.|+.++. +++.......
T Consensus 259 -----------------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~------------------- 302 (401)
T 4aez_A 259 -----------------NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA------------------- 302 (401)
T ss_dssp -----------------SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-------------------
T ss_pred -----------------cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-------------------
Confidence 12356899998444576653 467777773 3443222210
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeC--CCCceeeEEEEcC-CCcEEEeecCccCCCCCcCCCCCccc
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADI--DARKVNALRVIDS-TGRMFDFAGRWQSDKKNCNTTNCAEF 485 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~--~~~ri~~i~~i~~-~G~i~~~aG~~~~~~~~~~~~~~~~~ 485 (770)
-.....++++++|..+++-. ..+. |+..+. ++......--.
T Consensus 303 ------------------~~~v~~~~~s~~~~~l~~~~g~~dg~---i~v~~~~~~~~~~~~~~~--------------- 346 (401)
T 4aez_A 303 ------------------GSQVTSLIWSPHSKEIMSTHGFPDNN---LSIWSYSSSGLTKQVDIP--------------- 346 (401)
T ss_dssp ------------------SSCEEEEEECSSSSEEEEEECTTTCE---EEEEEEETTEEEEEEEEE---------------
T ss_pred ------------------CCcEEEEEECCCCCeEEEEeecCCCc---EEEEecCCccceeEEEec---------------
Confidence 02368899999998666632 3443 444442 33322221000
Q ss_pred ccCccCcccccceecCCeeEEEEcCCCcEEEEcCCCceEEee
Q psy4832 486 EKNSKETLLTSTARFTSISALSVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 486 ~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~~~~I~~i 527 (770)
..-....+++++|+|.++++-..++.|+..
T Consensus 347 ------------~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 347 ------------AHDTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp ------------CCSSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred ------------CCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 001235678999999876665555554433
No 193
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.59 Score=50.93 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=81.4
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCC-cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSI-NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g-~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
....++++|.+..|+++-..++.|..++.. ..++ .+..+.+. ..-..+..|++++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~----~~~~~~~~~~~~~--------------------~~~~~v~~~~~sp 159 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVD----KTSKNVLKLRKRF--------------------CFSKRPNAISIAE 159 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEEC----SSSSSCEEEEEEE--------------------ECSSCEEEEEECT
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECc----CCCCceeeeeecc--------------------cCCCCceEEEEcC
Confidence 357899998444455666666666666421 0022 22222210 0012467899999
Q ss_pred CCc-EEEEeCCC-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCC---CeEEEE-e-CCE
Q psy4832 302 DKT-MFIADGTN-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLD---DSLHFI-D-DRV 373 (770)
Q Consensus 302 ~G~-lYvaD~~~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~---g~lyv~-D-~~~ 373 (770)
+|. |++++... |+.++.. +..... + .......-.....|+++| + +.++++ + .+.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~--------------~---~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~ 221 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKF--------------T---QEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEH 221 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSC--------------C---CCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccc--------------c---ceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCc
Confidence 887 55555433 6666532 211000 0 000011123467899999 7 755544 4 456
Q ss_pred EEEEc-CCCc-EEEEe-cCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCc
Q psy4832 374 IFKLT-NDLK-VKIVA-GIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARK 450 (770)
Q Consensus 374 I~~i~-~~G~-v~~va-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~r 450 (770)
|+.++ ..+. +..+. + .-..+..++++ +|.++++-...+.
T Consensus 222 i~vwd~~~~~~~~~~~~~-------------------------------------h~~~v~~~~~s-d~~~l~s~~~d~~ 263 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFG-------------------------------------HKHFVSSICCG-KDYLLLSAGGDDK 263 (450)
T ss_dssp EEEEEESCTTCEEEECCC-------------------------------------CSSCEEEEEEC-STTEEEEEESSSE
T ss_pred EEEEECCCCceeeeeecC-------------------------------------CCCceEEEEEC-CCCEEEEEeCCCe
Confidence 66665 2333 22221 1 01236889999 8887776665554
Q ss_pred eeeEEEEcC-CCcE
Q psy4832 451 VNALRVIDS-TGRM 463 (770)
Q Consensus 451 i~~i~~i~~-~G~i 463 (770)
|+..+. +|+.
T Consensus 264 ---v~vwd~~~~~~ 274 (450)
T 2vdu_B 264 ---IFAWDWKTGKN 274 (450)
T ss_dssp ---EEEEETTTCCE
T ss_pred ---EEEEECCCCcE
Confidence 555553 4553
No 194
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.97 E-value=0.98 Score=53.11 Aligned_cols=271 Identities=11% Similarity=0.050 Sum_probs=146.8
Q ss_pred CCeEEECCCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeCceEEEEcCCCcEE
Q psy4832 132 EGILQKGDGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDFNLVRRLTPEGNVF 211 (770)
Q Consensus 132 ~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~~~I~~i~~~G~v~ 211 (770)
..|+++.+| .+|+.- .. -+..+.|.-.. .+.. ... ..-..-..|..|.+|.|||+..+-+.++++.....
T Consensus 25 ~~I~qD~~G-~lWigT-~~-GL~ryDG~~~~-~~~~--~~~----~~~~~i~~i~~d~~g~lWigT~~Gl~~yd~~~~~f 94 (758)
T 3ott_A 25 SCFLQDSEG-LIWIGS-NK-GLFSYDGYSTQ-QHFT--YGE----NNNTRIYCGVIIDNTYLYMGTDNGILVYNYRADRY 94 (758)
T ss_dssp EEEEECTTS-CEEEEE-SS-CEEEECSSCEE-ECSC--TTS----TTSSCEEEEEEETTTEEEEEETTEEEEEETTTTEE
T ss_pred EEEEECCCC-CEEEEE-CC-CccccCCCceE-EEEc--cCC----CCCceEEEEEEcCCCcEEEEeCCCeEEEeCCCCEE
Confidence 456777888 466653 33 34555542211 1110 000 01123567888999999999887888998653322
Q ss_pred EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccc
Q psy4832 212 TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKL 291 (770)
Q Consensus 212 ~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l 291 (770)
.... .........++.+ +|.|||+... .+.+++. .++.+..+... .. + ..-
T Consensus 95 ~~~~--~~~~~~i~~i~~~--~g~lWigt~~--Gl~~~~~------~~~~~~~~~~~-~~-----------~-----l~~ 145 (758)
T 3ott_A 95 EQPE--TDFPTDVRTMALQ--GDTLWLGALN--GLYTYQL------QSRKLTSFDTR-RN-----------G-----LPN 145 (758)
T ss_dssp CCCS--CCCCSCEEEEEEE--TTEEEEEETT--EEEEEET------TTCCEEEECHH-HH-----------C-----CSC
T ss_pred ECcc--cCCCceEEEEEec--CCcEEEEcCC--cceeEeC------CCCeEEEeccC-CC-----------C-----cCC
Confidence 1110 1111122344443 7899998754 7888852 22344433110 00 0 001
Q ss_pred cCcceEEEccCCcEEEEeCCCeEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe
Q psy4832 292 SHPKGLAIKADKTMFIADGTNIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID 370 (770)
Q Consensus 292 ~~P~gIavd~~G~lYvaD~~~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D 370 (770)
.....|+.|++|.|||+-...|.++++. +.+..+.-... . . ..-.....|..|+.++.|||..
T Consensus 146 ~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~-~----------~-----~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVH-S----------S-----QSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp SCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCC-T----------T-----CSSCCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCc-c----------c-----cccceeEEEEEECCCCEEEEEE
Confidence 2345788899999999865448888865 44443321100 0 0 0001245788887234589977
Q ss_pred CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCC
Q psy4832 371 DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDAR 449 (770)
Q Consensus 371 ~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ 449 (770)
.+.++++++. +++..+...+ -.....|+.|.+|.|||+-. ++
T Consensus 210 ~~Gl~~~~~~~~~~~~~~~l~------------------------------------~~~i~~i~~d~~g~lWigT~-~G 252 (758)
T 3ott_A 210 EGYLFQYFPSTGQIKQTEAFH------------------------------------NNSIKSLALDGNGDLLAGTD-NG 252 (758)
T ss_dssp EEEEEEEETTTTEEEEEEEEE------------------------------------EEEEEEEEECTTCCEEEEET-TE
T ss_pred CCCCeEEcCCCCeEEeccCCC------------------------------------CCeEEEEEEcCCCCEEEEeC-Cc
Confidence 6678888865 4443332100 01257899999999999874 32
Q ss_pred ceeeEEEEcCC-CcEEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCCcEEEEcCC
Q psy4832 450 KVNALRVIDST-GRMFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDGVVNVADQG 520 (770)
Q Consensus 450 ri~~i~~i~~~-G~i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG~lyvaD~~ 520 (770)
+..+++. +.+..+.-.... ...+. -+...+|..|.+|.|||+...
T Consensus 253 ----l~~~~~~~~~~~~~~~~~~~------------------~~~l~----~~~i~~i~~D~~g~lWiGT~~ 298 (758)
T 3ott_A 253 ----LYVYHNDTTPLQHIIHDSRN------------------IQSLT----NNIIWNIFADQEHNIWLGTDY 298 (758)
T ss_dssp ----EEEECCTTSCCEEECCCTTC------------------TTSCS----CSCEEEEEECTTCCEEEEESS
T ss_pred ----eeEEecCCCcEEEEEcCCCC------------------cCcCC----cCeEEEEEEcCCCCEEEEeCC
Confidence 5566653 444443211100 00001 134678999999999998654
No 195
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.96 E-value=0.43 Score=49.88 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=42.3
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-..+++.|++.+.++-. +.|+.++. +|+....+. ..-.....++++| ++...++-...+.|+.++
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~---~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV---GHQSEVYSVAFSP-DNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE---CCCSCEEEEEECS-STTEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc---CCCCcEEEEEECC-CCCEEEEEcCCCEEEEEe
Confidence 46789999998776543 57888774 466554442 1223467899998 666666655566777664
No 196
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.93 E-value=1.3 Score=54.12 Aligned_cols=102 Identities=8% Similarity=0.041 Sum_probs=51.2
Q ss_pred ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeC-----CCcEEEEEeccCCccCCCCcEEEEECCCccc
Q psy4832 199 NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDA-----EKHQILRVLSLESVADPSINWEVAVGSGERC 272 (770)
Q Consensus 199 ~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~-----~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~ 272 (770)
+.|+.++.+ |+...+.+ .......++++|.+..|.++.. +...|+.++. ..|....+.+....
T Consensus 33 ~~l~~~~~~gg~~~~lt~----~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~------~~g~~~~lt~~~~~- 101 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVS----NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG------ENGEIKRITYFSGK- 101 (1045)
T ss_dssp TEEEEEETTTCCEEEEEC----SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET------TTTEEEECCCCCEE-
T ss_pred CcEEEEECCCCcEEEeee----CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC------CCCCeEEcccCCCc-
Confidence 456666654 34444432 2234578899984444555432 3456777742 12333332221100
Q ss_pred cCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-C-------CeEEECCCC-cEEEe
Q psy4832 273 IPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-T-------NIRVVSPEG-IIHTL 325 (770)
Q Consensus 273 ~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~-------~Ir~id~~G-~i~t~ 325 (770)
..........+++.++|.|+++.. . .|+.++.++ ....+
T Consensus 102 --------------~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l 149 (1045)
T 1k32_A 102 --------------STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL 149 (1045)
T ss_dssp --------------EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC
T ss_pred --------------ccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEe
Confidence 001122346889999998655533 1 177777553 44443
No 197
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.93 E-value=0.15 Score=53.97 Aligned_cols=154 Identities=17% Similarity=0.170 Sum_probs=87.6
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
.-.+|++.|+|.++++-. +.|+.++. +|+....+. ..-.....++++|.+..++++-..++.|+.++..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~---~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~----- 200 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR---AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR----- 200 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT-----
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc---CcCCceEEEEecCCCCCceeeecccccccccccc-----
Confidence 347899999999776543 47888875 466655552 2233457899998666788887777777777431
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccC-CcEEEEe-CCC-eEEECCC-C-cEEEeecCCCCC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKAD-KTMFIAD-GTN-IRVVSPE-G-IIHTLIGHHKHH 332 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~-G~lYvaD-~~~-Ir~id~~-G-~i~t~~g~~~~~ 332 (770)
.+......... ..-..+..+++.++ ++++++- ... |+..|.. + .+.++.+..
T Consensus 201 -~~~~~~~~~~~-------------------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~--- 257 (344)
T 4gqb_B 201 -CPKPASQIGCS-------------------APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS--- 257 (344)
T ss_dssp -SSSCEEECC-----------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS---
T ss_pred -ccceeeeeecc-------------------eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC---
Confidence 12211111000 00113557888874 5566543 333 7777743 3 333443321
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEcCC-CcEEE
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLTND-LKVKI 385 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~~~-G~v~~ 385 (770)
.....|+++| ++ .+.++- .+.|+..+.. +++..
T Consensus 258 -------------------~~v~~v~fsp-~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 258 -------------------QCVTGLVFSP-HSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp -------------------SCEEEEEECS-SSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred -------------------CCEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 2346889998 66 444432 5677777743 44433
No 198
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.92 E-value=0.042 Score=58.41 Aligned_cols=197 Identities=21% Similarity=0.150 Sum_probs=107.1
Q ss_pred CceEEEEcCCCCEEEEe-C-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGD-F-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d-~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...+|++.|+|..+++- . +.|+.++.. ++....+. ..-.....++++|.+..++++-..++.|+.++..
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~----- 212 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN---AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR----- 212 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT-----
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc---CCCCCEEEEEEccCCCceeeeeccCCceEEEECC-----
Confidence 35789999999876653 3 578888754 66555552 2234467899998555677777667777766321
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCC-cEEEE-eCCC-eEEECCC-C-cEEEeecCCCCC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADK-TMFIA-DGTN-IRVVSPE-G-IIHTLIGHHKHH 332 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G-~lYva-D~~~-Ir~id~~-G-~i~t~~g~~~~~ 332 (770)
.+...... . . ...-..+..|++.|++ .++++ .... |+..|.. + .+.++.+..
T Consensus 213 -~~~~~~~~-------~---~---------~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~--- 269 (357)
T 4g56_B 213 -KPKPATRI-------D---F---------CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS--- 269 (357)
T ss_dssp -SSSCBCBC-------C---C---------TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS---
T ss_pred -CCceeeee-------e---e---------ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc---
Confidence 11100000 0 0 0011235678888764 45543 3333 7777643 3 233332221
Q ss_pred CCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEE-e-CCEEEEEcCC-CcEEEEecCCCCCCCCCCCCcccccccc
Q psy4832 333 NIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFI-D-DRVIFKLTND-LKVKIVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~-D-~~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
.....|+++| ++ .+.++ . ++.|+..+.+ +++....+.
T Consensus 270 -------------------~~v~~l~~sp-~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H------------------- 310 (357)
T 4g56_B 270 -------------------QNITGLAYSY-HSSPFLASISEDCTVAVLDADFSEVFRDLSH------------------- 310 (357)
T ss_dssp -------------------SCEEEEEECS-SSSCCEEEEETTSCEEEECTTSCEEEEECCC-------------------
T ss_pred -------------------eeEEEEEEcC-CCCCEEEEEeCCCEEEEEECCCCcEeEECCC-------------------
Confidence 1346789998 65 44443 2 5678777743 554433321
Q ss_pred ccccccccCCcccccccccCCeeEEEEcC-CCCEEEEeCCCCceeeEEEEcCCCcEEEe
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSP-TGDLYIADIDARKVNALRVIDSTGRMFDF 466 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~-~G~lyVaD~~~~ri~~i~~i~~~G~i~~~ 466 (770)
-....+|+++| ++.++++-...+.| ++..+...|+...+
T Consensus 311 ------------------~~~V~~vafsP~d~~~l~s~s~Dg~v-~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 311 ------------------RDFVTGVAWSPLDHSKFTTVGWDHKV-LHHHLPSEGRTENL 350 (357)
T ss_dssp ------------------SSCEEEEEECSSSTTEEEEEETTSCE-EEEECC--------
T ss_pred ------------------CCCEEEEEEeCCCCCEEEEEcCCCeE-EEEECCCCCccccc
Confidence 02368899998 78877776655554 45555556655444
No 199
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.88 E-value=0.56 Score=48.96 Aligned_cols=108 Identities=9% Similarity=-0.028 Sum_probs=54.8
Q ss_pred CCeEEECCCccEEecccCCCeEEEEeccCcc-CCccCCCCCcccccccccCceEEEEcCCCCEEEEe-C-ceEEEEcC-C
Q psy4832 132 EGILQKGDGSSLHLKHEFPRTVSVVMGTGLQ-RPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGD-F-NLVRRLTP-E 207 (770)
Q Consensus 132 ~gil~~~dG~~~~~~~~~~~~i~~v~g~G~~-~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d-~-~~I~~i~~-~ 207 (770)
..+....||..+.+.. ..+.|....-.... .... .....-....++++.|+|.++++- . +.|+.++. +
T Consensus 12 ~~~~~s~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQVH-------ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp CEEEECTTSSEEEEEC-SSSEEEEEEEETTEEEEEE-------EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred EEEEECCCCCEEEEEe-CCCEEEEEeCCCCcEEeee-------eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 4455566666555544 55566655433221 0000 000111245789999999866643 3 46776664 3
Q ss_pred CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 208 GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 208 G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
++....+.. ...-.....++++| ++.++++-..++.|..+
T Consensus 84 ~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 84 RTWKPTLVI-LRINRAARCVRWAP-NEKKFAVGSGSRVISIC 123 (372)
T ss_dssp TEEEEEEEC-CCCSSCEEEEEECT-TSSEEEEEETTSSEEEE
T ss_pred CeeeeeEEe-ecCCCceeEEEECC-CCCEEEEEeCCCEEEEE
Confidence 443333211 11223467899998 55555444444555544
No 200
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.88 E-value=0.29 Score=56.93 Aligned_cols=60 Identities=12% Similarity=-0.001 Sum_probs=35.0
Q ss_pred CceEEEEcCCCCEEEEeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEe
Q psy4832 181 TPVALTSGPDGSLYVGDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISD 240 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd 240 (770)
.|..+++.|||.+++++. +.|+.++.+ |+...++............++++|.+..|.++.
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~ 79 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSY 79 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEe
Confidence 366778888888554433 478888754 555555532111111467899998444455553
No 201
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.86 E-value=0.14 Score=55.67 Aligned_cols=188 Identities=15% Similarity=0.136 Sum_probs=108.0
Q ss_pred CceEEEEcCCCC-EEEEeC----ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC--CcEEEEEecc
Q psy4832 181 TPVALTSGPDGS-LYVGDF----NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE--KHQILRVLSL 252 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~----~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~--~~~I~~i~~~ 252 (770)
....+++.|||. |+++.. ..|+.++.. |+...+... ......++++|.+..|+++... +..|+.++.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~----~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~- 254 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF----PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL- 254 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC----SSCEEEEEECTTSSEEEEEECTTSSCEEEEEET-
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC----CCcccCEEEcCCCCEEEEEEecCCCceEEEEEC-
Confidence 357789999997 444433 278888864 666554431 2246789999844457756543 456888853
Q ss_pred CCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeC-C---CeEEECCC-CcEEEee
Q psy4832 253 ESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADG-T---NIRVVSPE-GIIHTLI 326 (770)
Q Consensus 253 ~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~-~---~Ir~id~~-G~i~t~~ 326 (770)
.++....+.+.. .....+++.++|. |+++.. . .|+.++.+ +.+..+.
T Consensus 255 -----~~~~~~~l~~~~----------------------~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 255 -----ASGQIRQVTDGR----------------------SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp -----TTCCEEECCCCS----------------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred -----CCCCEEeCcCCC----------------------CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe
Confidence 123333322110 1245788899987 555532 2 27777755 3433332
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEeC----CEEEEEcCC-CcEEEEecCCCCCCCCCCCC
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFIDD----RVIFKLTND-LKVKIVAGIPLHCRTGDKDK 400 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D~----~~I~~i~~~-G~v~~vaG~~~~~~~~~~~~ 400 (770)
..+ .....++++| +|. |+++.. ..|+.++.+ +++..+...
T Consensus 308 ~~~----------------------~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~----------- 353 (415)
T 2hqs_A 308 WEG----------------------SQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST----------- 353 (415)
T ss_dssp CSS----------------------SEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEEECCCS-----------
T ss_pred cCC----------------------CcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEEEecCC-----------
Confidence 111 1345789999 775 555542 478888854 444332210
Q ss_pred ccccccccccccccccCCcccccccccCCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcCCCc
Q psy4832 401 RDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGD-LYIADIDARKVNALRVIDSTGR 462 (770)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~~G~ 462 (770)
.....++++|+|. |+++.....+ ..|+.++.+|.
T Consensus 354 ---------------------------~~~~~~~~spdg~~l~~~s~~~~~-~~l~~~d~~g~ 388 (415)
T 2hqs_A 354 ---------------------------FLDETPSLAPNGTMVIYSSSQGMG-SVLNLVSTDGR 388 (415)
T ss_dssp ---------------------------SSCEEEEECTTSSEEEEEEEETTE-EEEEEEETTSC
T ss_pred ---------------------------CCcCCeEEcCCCCEEEEEEcCCCc-cEEEEEECCCC
Confidence 1357889999998 5555444432 35777776654
No 202
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.52 Score=47.73 Aligned_cols=184 Identities=14% Similarity=0.095 Sum_probs=95.7
Q ss_pred CceEEEEcCCCCEEEEe-C-ceEEEEcCC----CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCC
Q psy4832 181 TPVALTSGPDGSLYVGD-F-NLVRRLTPE----GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d-~-~~I~~i~~~----G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~ 254 (770)
....+++.|+|.++++- . +.|+.++.. ++....+. ..-.....++++ +.++++-..++.|..++
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d---- 130 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI---GHQGNVCSLSFQ---DGVVISGSWDKTAKVWK---- 130 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC---CCSSCEEEEEEE---TTEEEEEETTSEEEEEE----
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh---hcccCEEEEEec---CCEEEEEeCCCCEEEEc----
Confidence 45788899988866543 3 355555422 22222221 122234566664 34555555566777763
Q ss_pred ccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-CCcEEE-EeCCC-eEEECCCCcEEEeecCCCC
Q psy4832 255 VADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA-DKTMFI-ADGTN-IRVVSPEGIIHTLIGHHKH 331 (770)
Q Consensus 255 ~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~-~G~lYv-aD~~~-Ir~id~~G~i~t~~g~~~~ 331 (770)
.......+.+. -.....+++.+ ++++++ +.... |+..+....+..+.+..
T Consensus 131 ---~~~~~~~~~~~----------------------~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-- 183 (313)
T 3odt_A 131 ---EGSLVYNLQAH----------------------NASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIH-- 183 (313)
T ss_dssp ---TTEEEEEEECC----------------------SSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSC--
T ss_pred ---CCcEEEecccC----------------------CCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccC--
Confidence 11112222211 11234566655 555443 33333 77776444444433211
Q ss_pred CCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcCC-CcEE-EEecCCCCCCCCCCCCcccccccc
Q psy4832 332 HNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTND-LKVK-IVAGIPLHCRTGDKDKRDFKDKQS 408 (770)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~~-G~v~-~vaG~~~~~~~~~~~~~~~~~~~~ 408 (770)
-.....++++| ++.|+.+. ++.|+.++.. ++.. .+.+.
T Consensus 184 -------------------~~~i~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~------------------- 224 (313)
T 3odt_A 184 -------------------NDVVRHLAVVD-DGHFISCSNDGLIKLVDMHTGDVLRTYEGH------------------- 224 (313)
T ss_dssp -------------------SSCEEEEEEEE-TTEEEEEETTSEEEEEETTTCCEEEEEECC-------------------
T ss_pred -------------------cccEEEEEEcC-CCeEEEccCCCeEEEEECCchhhhhhhhcC-------------------
Confidence 12356788988 78866655 5678777743 4432 22211
Q ss_pred ccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc
Q psy4832 409 KTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR 462 (770)
Q Consensus 409 ~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~ 462 (770)
-.....++++|+|.|+.+..++ .|+..+. +++
T Consensus 225 ------------------~~~i~~~~~~~~~~l~~~~~dg----~v~iwd~~~~~ 257 (313)
T 3odt_A 225 ------------------ESFVYCIKLLPNGDIVSCGEDR----TVRIWSKENGS 257 (313)
T ss_dssp ------------------SSCEEEEEECTTSCEEEEETTS----EEEEECTTTCC
T ss_pred ------------------CceEEEEEEecCCCEEEEecCC----EEEEEECCCCc
Confidence 1236889999999777666554 3666663 454
No 203
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.81 E-value=0.18 Score=50.44 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=21.7
Q ss_pred CeeEEEEcCCCC-EEEEeCCCCceeeEEEEcC-CCcEEEe
Q psy4832 429 SLTALAFSPTGD-LYIADIDARKVNALRVIDS-TGRMFDF 466 (770)
Q Consensus 429 ~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~-~G~i~~~ 466 (770)
.+..++++|+|. |+++...... .+|..++. .+.+..+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERI 212 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEEC
T ss_pred ccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEE
Confidence 368899999998 5555432333 25666664 3344333
No 204
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.81 E-value=0.086 Score=54.69 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=38.6
Q ss_pred CceEEEEcCCCCEEEE-eC-ceEEEEcCC-Cc----EEEEeccCcccccceeEEEEeCCCCc-EEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVG-DF-NLVRRLTPE-GN----VFTVLQLSATQVSYQYYLALSPADGH-LYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~-d~-~~I~~i~~~-G~----v~~~~~~~~~~~~~p~~lav~p~~g~-lyvsd~~~~~I~~i~ 250 (770)
...++++.|+|.++++ .. +.|+.++.+ +. .....+ .-.....++++| ++. ++++-..++.|+.++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR----YKHPLLCCNFID-NTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE----CSSCEEEEEEEE-SSSEEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee----cCCceEEEEECC-CCCcEEEEEcCCCeEEEEE
Confidence 3567888888875544 33 456665532 33 333332 223467899998 566 555555567787774
No 205
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.80 E-value=0.67 Score=48.77 Aligned_cols=65 Identities=11% Similarity=0.026 Sum_probs=43.3
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.++++.|+|..+++-. +.|+.++. .++....+.. .......++++| ++.++++-..++.|..++
T Consensus 67 V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~---~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 67 VLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM---PCTWVMACAYAP-SGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---SSSCCCEEEECT-TSSEEEEESTTSEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec---CCCCEEEEEECC-CCCEEEEeeCCCCEEEEE
Confidence 46788899988766543 47777774 4555444422 223457899998 777777777777776664
No 206
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.79 E-value=1.2 Score=51.54 Aligned_cols=187 Identities=17% Similarity=0.181 Sum_probs=102.1
Q ss_pred ceEEEEcCCC-CEEEEeC--ceEEEEcCC------CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 182 PVALTSGPDG-SLYVGDF--NLVRRLTPE------GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 182 P~~la~~~dG-~lyv~d~--~~I~~i~~~------G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
-.+|++.+++ +++++-. +.|+.++.+ +.....+. ..-.....++++| ++.+.++-..++.|+.++.
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~---~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~- 459 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT---GHSHFVEDVVLSS-DGQFALSGSWDGELRLWDL- 459 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-
T ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec---CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEC-
Confidence 4677887754 6666433 466666532 22222221 1223457899997 7777777777788887753
Q ss_pred CCccCCCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CCC-eEEECCCCcEEEeecCC
Q psy4832 253 ESVADPSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GTN-IRVVSPEGIIHTLIGHH 329 (770)
Q Consensus 253 ~~~~~~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~~-Ir~id~~G~i~t~~g~~ 329 (770)
.++.. ..+.+. -.....|++++++...++- ... |+..+..+.........
T Consensus 460 -----~~~~~~~~~~~h----------------------~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 460 -----AAGVSTRRFVGH----------------------TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp -----TTTEEEEEEECC----------------------SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS
T ss_pred -----CCCcceeEEeCC----------------------CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccC
Confidence 12222 222221 1124578899888755543 333 88888655332222111
Q ss_pred CCCCCcCCCccCCCcccccccccCcceEEEeCCCC--eEEEE-e-CCEEEEEcCC-CcEE-EEecCCCCCCCCCCCCccc
Q psy4832 330 KHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD--SLHFI-D-DRVIFKLTND-LKVK-IVAGIPLHCRTGDKDKRDF 403 (770)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g--~lyv~-D-~~~I~~i~~~-G~v~-~vaG~~~~~~~~~~~~~~~ 403 (770)
.. ..-.+...++++| ++ .++++ . .+.|+..+.. ++.. .+.+.
T Consensus 513 ~~-----------------~h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h-------------- 560 (694)
T 3dm0_A 513 GE-----------------GHRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH-------------- 560 (694)
T ss_dssp TT-----------------SCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCC--------------
T ss_pred CC-----------------CCCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC--------------
Confidence 00 1122456788888 54 33343 3 4666666633 3332 22211
Q ss_pred cccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEc
Q psy4832 404 KDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVID 458 (770)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~ 458 (770)
-.....|+++|+|.++++-...+. |+..|
T Consensus 561 -----------------------~~~v~~v~~spdg~~l~sg~~Dg~---i~iwd 589 (694)
T 3dm0_A 561 -----------------------TGYVSTVAVSPDGSLCASGGKDGV---VLLWD 589 (694)
T ss_dssp -----------------------SSCEEEEEECTTSSEEEEEETTSB---CEEEE
T ss_pred -----------------------CCCEEEEEEeCCCCEEEEEeCCCe---EEEEE
Confidence 123688999999998887766654 44445
No 207
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.72 E-value=0.73 Score=48.08 Aligned_cols=69 Identities=19% Similarity=0.174 Sum_probs=41.9
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA 301 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~ 301 (770)
....++++| ++.+.++-...+.|+.++. .++. +..+.+. -.....+++.+
T Consensus 78 ~V~~~~~~~-~~~~l~s~s~D~~v~lwd~------~~~~~~~~~~~h----------------------~~~v~~v~~sp 128 (343)
T 2xzm_R 78 FVSDLALSQ-ENCFAISSSWDKTLRLWDL------RTGTTYKRFVGH----------------------QSEVYSVAFSP 128 (343)
T ss_dssp CEEEEEECS-STTEEEEEETTSEEEEEET------TSSCEEEEEECC----------------------CSCEEEEEECS
T ss_pred ceEEEEECC-CCCEEEEEcCCCcEEEEEC------CCCcEEEEEcCC----------------------CCcEEEEEECC
Confidence 357899997 7777777777778877753 1232 2222221 11345789999
Q ss_pred CCcEEEE-eCCC-eEEECCCC
Q psy4832 302 DKTMFIA-DGTN-IRVVSPEG 320 (770)
Q Consensus 302 ~G~lYva-D~~~-Ir~id~~G 320 (770)
+|...++ .... |+..+..+
T Consensus 129 ~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 129 DNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp STTEEEEEETTSCEEEEESSS
T ss_pred CCCEEEEEcCCCEEEEEeccC
Confidence 8875554 3333 77777654
No 208
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.71 E-value=0.049 Score=61.98 Aligned_cols=185 Identities=11% Similarity=0.033 Sum_probs=93.5
Q ss_pred CCeEEECCCccEEecccCCCeEEEEec-cCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEeC----c--eEEEE
Q psy4832 132 EGILQKGDGSSLHLKHEFPRTVSVVMG-TGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGDF----N--LVRRL 204 (770)
Q Consensus 132 ~gil~~~dG~~~~~~~~~~~~i~~v~g-~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d~----~--~I~~i 204 (770)
..+....||..+.+.....+.+.+..- .|..+.+.. ........+++.||.-+|.++. . +|..+
T Consensus 25 ~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~---------~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 25 YSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR---------EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp EEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS---------SCCSEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred heeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec---------ccccccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 445667888776554312444333321 222222210 0011234556667744565664 1 67778
Q ss_pred cC--CCcEEEEeccCcccccceeEEEEeCCCCc-EEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcC
Q psy4832 205 TP--EGNVFTVLQLSATQVSYQYYLALSPADGH-LYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCG 281 (770)
Q Consensus 205 ~~--~G~v~~~~~~~~~~~~~p~~lav~p~~g~-lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g 281 (770)
+. +|....+.. ......++++|..+. +|++...+ .+..++. ..|....+...
T Consensus 96 ~~~~~g~~~~l~~-----~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~------~~g~~~~l~~~------------- 150 (582)
T 3o4h_A 96 NTSRPGEEQRLEA-----VKPMRILSGVDTGEAVVFTGATED-RVALYAL------DGGGLRELARL------------- 150 (582)
T ss_dssp ETTSTTCCEECTT-----SCSBEEEEEEECSSCEEEEEECSS-CEEEEEE------ETTEEEEEEEE-------------
T ss_pred eccCCCccccccC-----CCCceeeeeCCCCCeEEEEecCCC-CceEEEc------cCCcEEEeecC-------------
Confidence 77 776553321 112335577764444 45544443 3333321 12333333210
Q ss_pred CCcccccccccCcceEEEccCCcEEE-E--eCC---CeEEECC-CCcEEEeecCCCCCCCcCCCccCCCcccccccccCc
Q psy4832 282 DNGPALAAKLSHPKGLAIKADKTMFI-A--DGT---NIRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWP 354 (770)
Q Consensus 282 ~~g~~~~a~l~~P~gIavd~~G~lYv-a--D~~---~Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P 354 (770)
....++++|||...+ + |.. .|+.+|. .|...++.+... ..
T Consensus 151 -----------~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~----------------------~~ 197 (582)
T 3o4h_A 151 -----------PGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG----------------------SF 197 (582)
T ss_dssp -----------SSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC----------------------EE
T ss_pred -----------CCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC----------------------cc
Confidence 015788899998433 3 222 2888885 466665543211 23
Q ss_pred ceEEEeCCCCe-EEEEe-CC--EEEEEcCC-CcEE
Q psy4832 355 TGLALSPLDDS-LHFID-DR--VIFKLTND-LKVK 384 (770)
Q Consensus 355 ~gla~d~~~g~-lyv~D-~~--~I~~i~~~-G~v~ 384 (770)
..++++| +|+ |+.++ .+ .|++++.+ |+.+
T Consensus 198 ~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 198 SSASISP-GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 6789999 776 55445 34 79999865 4554
No 209
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.17 Score=54.14 Aligned_cols=27 Identities=7% Similarity=-0.128 Sum_probs=18.8
Q ss_pred CcceEEEeCCC-CeEEEEe--CCEEEEEcCC
Q psy4832 353 WPTGLALSPLD-DSLHFID--DRVIFKLTND 380 (770)
Q Consensus 353 ~P~gla~d~~~-g~lyv~D--~~~I~~i~~~ 380 (770)
....|+++| + +.++++- ++.|+.++..
T Consensus 167 ~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 167 EVISLAWNQ-SLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp CCCEEEECS-SCTTEEEEESSSSCEEEEETT
T ss_pred CeeEEEeCC-CCCcEEEEEcCCCCEEEEECC
Confidence 467899999 5 6666653 5677777743
No 210
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.69 E-value=0.68 Score=47.30 Aligned_cols=149 Identities=13% Similarity=0.143 Sum_probs=84.1
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
....+++.|+|+++++-. +.|+.++. +++....+. ..-.....++++| ++.++++-..++.|+.++.
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~------ 136 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------ 136 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEET------
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEC------
Confidence 356899999998776543 47777774 455554442 1223457889998 6666666666677777743
Q ss_pred CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CCC-eEEECCC-CcE-EEeecCCCCCC
Q psy4832 258 PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GTN-IRVVSPE-GII-HTLIGHHKHHN 333 (770)
Q Consensus 258 ~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~~-Ir~id~~-G~i-~t~~g~~~~~~ 333 (770)
.++........ .-.....++++++|.++++- ... |+..|.. +.. ..+....
T Consensus 137 ~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---- 191 (312)
T 4ery_A 137 KTGKCLKTLPA---------------------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---- 191 (312)
T ss_dssp TTCCEEEEECC---------------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSS----
T ss_pred CCCEEEEEecC---------------------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccC----
Confidence 12222211110 00123578888888755543 333 7777743 332 2322111
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCeEEEE-e-CCEEEEEcC-CCc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFI-D-DRVIFKLTN-DLK 382 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~-D-~~~I~~i~~-~G~ 382 (770)
-.....++++| ++..+++ . ++.|+.++. +++
T Consensus 192 -----------------~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 192 -----------------NPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp -----------------CCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTE
T ss_pred -----------------CCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCc
Confidence 01234688998 7765444 3 577877774 344
No 211
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.68 E-value=0.021 Score=64.87 Aligned_cols=127 Identities=24% Similarity=0.416 Sum_probs=77.7
Q ss_pred cccccceeEEEEeCCCCcEEEEeCCC---------------------cEEEEEeccCCccCCC---CcEEEEE--CCCcc
Q psy4832 218 ATQVSYQYYLALSPADGHLYISDAEK---------------------HQILRVLSLESVADPS---INWEVAV--GSGER 271 (770)
Q Consensus 218 ~~~~~~p~~lav~p~~g~lyvsd~~~---------------------~~I~~i~~~~~~~~~~---g~~~~va--G~g~~ 271 (770)
++.+..|.+++++|.++.||++.+++ ++|+++..... +.. ..++.++ |....
T Consensus 380 AT~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~--d~~a~~f~w~~~v~~g~p~~ 457 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRD--DHASKTFAWDLFVVAGNPSV 457 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGG--CTTCSEEEEEEEEECCCTTT
T ss_pred eEEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCC--ccccceeEEEEEEeccCccc
Confidence 56789999999999999999997753 57888854322 111 1233332 22111
Q ss_pred ccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CC------------C-eEEECCC-CcEEEeecCCCCCCCcC
Q psy4832 272 CIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GT------------N-IRVVSPE-GIIHTLIGHHKHHNIWS 336 (770)
Q Consensus 272 ~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~------------~-Ir~id~~-G~i~t~~g~~~~~~~~~ 336 (770)
.......+.........|..|..|+||+.|+|||+. .. | +...++. |.+..++-...
T Consensus 458 --~~~~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~------ 529 (592)
T 3zwu_A 458 --HAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI------ 529 (592)
T ss_dssp --STTSGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT------
T ss_pred --ccccccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC------
Confidence 000000111112233468999999999999999984 31 2 5666654 77777763321
Q ss_pred CCccCCCcccccccccCcceEEEeCCCC-eEEEE
Q psy4832 337 PFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFI 369 (770)
Q Consensus 337 p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~ 369 (770)
. ...+|++++| ++ .|||.
T Consensus 530 --g------------aE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 530 --G------------CEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp --T------------CEEEEEEECT-TSSEEEEE
T ss_pred --C------------ccCcCeeECC-CCCEEEEE
Confidence 1 1467999999 65 47765
No 212
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.64 E-value=0.19 Score=53.78 Aligned_cols=118 Identities=13% Similarity=0.019 Sum_probs=63.3
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC--CCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEc
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVAD--PSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIK 300 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~--~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd 300 (770)
....++++|.++.++++-..++.|..++....... ....+..+.+ .-.....|++.
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~----------------------h~~~v~~~~~~ 140 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG----------------------HTKRVGIVAWH 140 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC----------------------CSSCEEEEEEC
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC----------------------CCCeEEEEEEC
Confidence 45789999856777777666777777643211000 0001111111 11235688999
Q ss_pred cCC-cEEEE-eCCC-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeE-EEEe-CCEE
Q psy4832 301 ADK-TMFIA-DGTN-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSL-HFID-DRVI 374 (770)
Q Consensus 301 ~~G-~lYva-D~~~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~l-yv~D-~~~I 374 (770)
+++ +++++ .... |+..|.. +.....+.... .-.....|+++| ++.+ +.+. ++.|
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~-~~~~l~~~~~d~~i 200 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV-------------------HPDTIYSVDWSR-DGALICTSCRDKRV 200 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT-------------------CCSCEEEEEECT-TSSCEEEEETTSEE
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC-------------------CCCceEEEEECC-CCCEEEEEecCCcE
Confidence 987 45554 4333 7777743 43332221000 012357899999 7764 4444 5788
Q ss_pred EEEcCC-Cc
Q psy4832 375 FKLTND-LK 382 (770)
Q Consensus 375 ~~i~~~-G~ 382 (770)
+.++.. ++
T Consensus 201 ~iwd~~~~~ 209 (402)
T 2aq5_A 201 RVIEPRKGT 209 (402)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCc
Confidence 888843 44
No 213
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.64 E-value=0.055 Score=61.61 Aligned_cols=70 Identities=14% Similarity=0.105 Sum_probs=42.7
Q ss_pred ceEEEeCCCCeEEE-E-eC----CEEEEEcC-CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccccccccc
Q psy4832 355 TGLALSPLDDSLHF-I-DD----RVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDL 427 (770)
Q Consensus 355 ~gla~d~~~g~lyv-~-D~----~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 427 (770)
..++++| +|+..+ + +. ..|+.++. +|+.+.+.+..
T Consensus 153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~------------------------------------- 194 (582)
T 3o4h_A 153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE------------------------------------- 194 (582)
T ss_dssp CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS-------------------------------------
T ss_pred ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC-------------------------------------
Confidence 5788999 786443 3 22 56888884 46655544211
Q ss_pred CCeeEEEEcCCCC-EEEEeCCCCceeeEEEEcCC-CcEE
Q psy4832 428 GSLTALAFSPTGD-LYIADIDARKVNALRVIDST-GRMF 464 (770)
Q Consensus 428 ~~P~giavd~~G~-lyVaD~~~~ri~~i~~i~~~-G~i~ 464 (770)
.....++++|||. |+.++..+. ..|+.++.+ |+..
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~--~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETARE--ARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSC--EEEEEECTTTCCEE
T ss_pred CccccceECCCCCEEEEccCCCe--eEEEEEcCCCCcEE
Confidence 1247889999998 554454432 357788864 4544
No 214
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.62 E-value=0.34 Score=51.32 Aligned_cols=125 Identities=14% Similarity=0.065 Sum_probs=64.0
Q ss_pred CcceEEEccCCcEEEEeCC-C-eEEECCC-CcE-EEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEE
Q psy4832 293 HPKGLAIKADKTMFIADGT-N-IRVVSPE-GII-HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHF 368 (770)
Q Consensus 293 ~P~gIavd~~G~lYvaD~~-~-Ir~id~~-G~i-~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv 368 (770)
....|++.+++ ++++-.. . |+.++.. +.. ..+.+...+. ..-.....|+++| ++.+++
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~----------------~~~~~i~~i~~~~-~~~~l~ 249 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMI----------------NNSNSIRSVKFSP-QGSLLA 249 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------------------CCCCCEEEEEECS-STTEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccccc----------------ccCCccceEEECC-CCCEEE
Confidence 46789999988 5554433 3 7777754 433 2332200000 0012356899999 776555
Q ss_pred E-e-C---CEEEEEcC-CCcE-EEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCE
Q psy4832 369 I-D-D---RVIFKLTN-DLKV-KIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDL 441 (770)
Q Consensus 369 ~-D-~---~~I~~i~~-~G~v-~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~l 441 (770)
+ . + +.|+.++. +++. ..+.+.. ..... .....+.-.....++++|+|.+
T Consensus 250 ~~~~d~~~g~i~i~d~~~~~~~~~~~~~~-~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETEFGERIGSLSVPT-HSSQA-----------------------SLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECBC--------------------------------CCBSBSSCEEEEEECSSSSE
T ss_pred EEecCCCCceEEEEECCCCcccceeccCc-ccccc-----------------------cccccccCCcEEEEEECCCCCE
Confidence 4 3 4 67888884 4543 3333210 00000 0000001134688999999987
Q ss_pred EEEeCCCCceeeEEEEcC-CCc
Q psy4832 442 YIADIDARKVNALRVIDS-TGR 462 (770)
Q Consensus 442 yVaD~~~~ri~~i~~i~~-~G~ 462 (770)
+++-...+. |+..+. +++
T Consensus 306 l~~~~~dg~---i~iwd~~~~~ 324 (397)
T 1sq9_A 306 LCSAGWDGK---LRFWDVKTKE 324 (397)
T ss_dssp EEEEETTSE---EEEEETTTTE
T ss_pred EEEEeCCCe---EEEEEcCCCc
Confidence 777665554 555553 343
No 215
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.59 E-value=1 Score=48.07 Aligned_cols=190 Identities=14% Similarity=0.106 Sum_probs=101.2
Q ss_pred ceEEEEcCCCCEEEEeC-ceEEEEc-CCCcEEEEeccCc---------------ccccceeEEEEeCCCCcEEEEeCCCc
Q psy4832 182 PVALTSGPDGSLYVGDF-NLVRRLT-PEGNVFTVLQLSA---------------TQVSYQYYLALSPADGHLYISDAEKH 244 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~-~~I~~i~-~~G~v~~~~~~~~---------------~~~~~p~~lav~p~~g~lyvsd~~~~ 244 (770)
..++++.|||.++++-. ..++.++ .+|+....+.... ..-.....++++| +|.++++-..++
T Consensus 67 V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~s~~~d~ 145 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLATGAEDR 145 (393)
T ss_dssp CCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEEEEcCCC
Confidence 35788899998776644 3555555 3566554432110 0111256899998 777777666667
Q ss_pred EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CC-eEEECCC-Cc
Q psy4832 245 QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TN-IRVVSPE-GI 321 (770)
Q Consensus 245 ~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~-Ir~id~~-G~ 321 (770)
.|+.++. .++....... ++ -.....|++.++|...++-+ .. |+..|.. +.
T Consensus 146 ~i~iwd~------~~~~~~~~~~----------~h-----------~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 146 LIRIWDI------ENRKIVMILQ----------GH-----------EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CEEEEET------TTTEEEEEEC----------CC-----------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEC------CCCcEEEEEc----------cC-----------CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 7777742 1233222211 00 11245788988887555533 33 7777743 43
Q ss_pred EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC-CCcEEEEecCCCCCCCCCC
Q psy4832 322 IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN-DLKVKIVAGIPLHCRTGDK 398 (770)
Q Consensus 322 i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~-~G~v~~vaG~~~~~~~~~~ 398 (770)
........ .....++++|.++.++++- ++.|+.++. .+.............
T Consensus 199 ~~~~~~~~----------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~---- 252 (393)
T 1erj_A 199 CSLTLSIE----------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG---- 252 (393)
T ss_dssp EEEEEECS----------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC----------
T ss_pred eEEEEEcC----------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC----
Confidence 32222111 1245678887566655543 466777763 344322221100000
Q ss_pred CCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCc
Q psy4832 399 DKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARK 450 (770)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~r 450 (770)
...-....+|+++++|.++++-...+.
T Consensus 253 -------------------------~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 253 -------------------------TGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp -------------------------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred -------------------------CCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 001134688999999997776665554
No 216
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.58 E-value=0.46 Score=50.24 Aligned_cols=61 Identities=23% Similarity=0.220 Sum_probs=34.6
Q ss_pred EEcCCCC-EEE-EeC-c--eEEEEcCCC-cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 186 TSGPDGS-LYV-GDF-N--LVRRLTPEG-NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 186 a~~~dG~-lyv-~d~-~--~I~~i~~~G-~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
++.|||. |++ ++. + .|..++.++ +...+... .-....+++++|.+..|+++... ..|+.++
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d 108 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKDG-RNLMRVD 108 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEETT-TEEEEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeCC-CeEEEEE
Confidence 5678886 333 332 2 588888664 44433321 11112356899855567777643 5788775
No 217
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.58 E-value=0.59 Score=50.67 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=60.0
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA- 301 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~- 301 (770)
...+|+++|.+..++++-...+.|..++..... ..... +.-. ......-.....|++++
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~--~~~~----------------~~~~~h~~~v~~v~~~p~ 242 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATP--KEHRV--IDAK----------------NIFTGHTAVVEDVAWHLL 242 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCC--BGGGE--EECS----------------EEECCCSSCEEEEEECSS
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCC--CCCce--eccc----------------eeecCCCCCEeeeEEeCC
Confidence 468899998544377777777777777532100 00000 0000 00001112356889988
Q ss_pred CCcEEEEeCCC--eEEECCC-C----cEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe--C
Q psy4832 302 DKTMFIADGTN--IRVVSPE-G----IIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID--D 371 (770)
Q Consensus 302 ~G~lYvaD~~~--Ir~id~~-G----~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D--~ 371 (770)
++.++++.... |+..|.. + .+..+.+ .-..+..|+++| ++. ++++- +
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~----------------------~~~~v~~i~~~p-~~~~~l~tg~~d 299 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA----------------------HTAEVNCLSFNP-YSEFILATGSAD 299 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC----------------------CSSCEEEEEECS-SCTTEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeec----------------------CCCCeEEEEeCC-CCCCEEEEEeCC
Confidence 56677665433 7777643 1 1111111 112467899999 654 66554 4
Q ss_pred CEEEEEcC
Q psy4832 372 RVIFKLTN 379 (770)
Q Consensus 372 ~~I~~i~~ 379 (770)
+.|..++.
T Consensus 300 g~v~vwd~ 307 (430)
T 2xyi_A 300 KTVALWDL 307 (430)
T ss_dssp SEEEEEET
T ss_pred CeEEEEeC
Confidence 67777764
No 218
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.94 Score=47.16 Aligned_cols=67 Identities=9% Similarity=-0.026 Sum_probs=37.7
Q ss_pred CceEEEEcCCCCEEEEe-C-ceEEEEcCC---CcEEEEeccCcccccceeEEEEeCC-CCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVGD-F-NLVRRLTPE---GNVFTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d-~-~~I~~i~~~---G~v~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~~I~~i~ 250 (770)
...++++.|+|.++++- . +.|+.++.+ ++....+. ..-.....|++++. ++.++++-..++.|+.++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 34678888988865543 3 456666543 23333331 12234578888753 266666655556666554
No 219
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.53 E-value=0.93 Score=46.82 Aligned_cols=68 Identities=4% Similarity=-0.053 Sum_probs=39.0
Q ss_pred CceEEEEcCCCC-EEEEe-----CceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCC--CcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGS-LYVGD-----FNLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPAD--GHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d-----~~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~--g~lyvsd~~~~~I~~i~ 250 (770)
...++++.|+|. ++++- .+.|+.++.+ ++....... ........++++|.. +.++++-..++.|..++
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 346788899885 43333 3466666643 444433221 122345788999853 56555555567777774
No 220
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.49 E-value=1.1 Score=47.22 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=41.4
Q ss_pred CeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcE-EEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEE
Q psy4832 429 SLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRM-FDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISAL 506 (770)
Q Consensus 429 ~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i-~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gi 506 (770)
....|+++|+|.++++-........|+..+. +++. ..+.+...... ......+.-.....+
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ-----------------ASLGEFAHSSWVMSL 297 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------------------------CCBSBSSCEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccc-----------------ccccccccCCcEEEE
Confidence 3688999999987666554411113666663 4443 33332110000 000000012346788
Q ss_pred EEcCCCcEEEEcCCCceEEee
Q psy4832 507 SVSPDGVVNVADQGSLHILAL 527 (770)
Q Consensus 507 av~~dG~lyvaD~~~~~I~~i 527 (770)
+++|+|.++++-..++.|+..
T Consensus 298 ~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 298 SFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp EECSSSSEEEEEETTSEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEE
Confidence 999988776665555555444
No 221
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.39 E-value=1.1 Score=46.20 Aligned_cols=114 Identities=16% Similarity=0.173 Sum_probs=61.1
Q ss_pred ceEEEEcCCC-CEEEEeC--ceEEEEcCC--C----cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 182 PVALTSGPDG-SLYVGDF--NLVRRLTPE--G----NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 182 P~~la~~~dG-~lyv~d~--~~I~~i~~~--G----~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
..+|++.|++ +++++-. +.|+.++.. . .....+. ..-.....++++| ++.+.++-...+.|+.++.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~- 94 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK---GHSHIVQDCTLTA-DGAYALSASWDKTLRLWDV- 94 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe---CCcccEEEEEECC-CCCEEEEEeCCCEEEEEEC-
Confidence 3567777744 5555432 345554422 1 1112221 1223356789997 7777777777788887753
Q ss_pred CCccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CC-eEEECCCCc-EEEeec
Q psy4832 253 ESVADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TN-IRVVSPEGI-IHTLIG 327 (770)
Q Consensus 253 ~~~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~-Ir~id~~G~-i~t~~g 327 (770)
.++. +..+.+. -.....|++++++.+.++-+ .. |+..+..+. +.++.+
T Consensus 95 -----~~~~~~~~~~~h----------------------~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 146 (319)
T 3frx_A 95 -----ATGETYQRFVGH----------------------KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLG 146 (319)
T ss_dssp -----TTTEEEEEEECC----------------------SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred -----CCCCeeEEEccC----------------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 2233 2223221 11245788998888666543 33 888776653 444443
No 222
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.39 E-value=0.56 Score=53.90 Aligned_cols=162 Identities=12% Similarity=0.067 Sum_probs=91.3
Q ss_pred CceEEEEcCCCC-EEEEe-C----------ceEEEEcCCC-------cEEEEeccCcccccceeEEEEeCCCCcEEEEeC
Q psy4832 181 TPVALTSGPDGS-LYVGD-F----------NLVRRLTPEG-------NVFTVLQLSATQVSYQYYLALSPADGHLYISDA 241 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d-~----------~~I~~i~~~G-------~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~ 241 (770)
.+..+++.|||. |+++. . ..|++++.++ ....+.. ........++++|.+..|+++..
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD---DAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC---SCSSEECCCEECTTSSEEEEEEE
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe---cCCCcccCceECCCCCEEEEEEC
Confidence 457889999997 44433 2 3788888766 3333320 12234567889985556766653
Q ss_pred CC-------cEEEEEeccCCccCCCC---cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-
Q psy4832 242 EK-------HQILRVLSLESVADPSI---NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG- 310 (770)
Q Consensus 242 ~~-------~~I~~i~~~~~~~~~~g---~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~- 310 (770)
.. ..|+.++. +.+| ....+.... -..+..+++.++|.||++..
T Consensus 208 ~~~~~~~~~~~i~~~d~-----~~~g~~~~~~~l~~~~---------------------~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 208 DHPRMPWEGTELKTARV-----TEDGRFADTRTLLGGP---------------------EEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp CTTCCTTTCEEEEEEEE-----CTTSCEEEEEEEEEET---------------------TBCEEEEEECTTSCEEEEECT
T ss_pred CCCCCCCCCcEEEEEEE-----CCCCcccccEEeCCCC---------------------CceEcceEECCCCeEEEEECC
Confidence 32 57877753 1124 333333210 01355788999998776542
Q ss_pred C---CeEEECC-CCcEEEeecCCCCCCCcCCCccCCCccccccccc-CcceEEEeCCCCeEEEEe---CCEEEEEcCC-C
Q psy4832 311 T---NIRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQ-WPTGLALSPLDDSLHFID---DRVIFKLTND-L 381 (770)
Q Consensus 311 ~---~Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~-~P~gla~d~~~g~lyv~D---~~~I~~i~~~-G 381 (770)
. +|++++. .|....+....... ..| ... ....+++.+ ++.++++- ..+|++++.+ +
T Consensus 262 ~~~~~l~~~~~~~~~~~~l~~~~~~~--~~p------------~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 262 TGWWNLHRVDPATGAATQLCRREEEF--AGP------------LWTPGMRWFAPLA-NGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp TSSCEEEEECTTTCCEEESSCCSSBS--SCC------------CCSTTCCSEEECT-TSCEEEEEBSSSCEEEEEETTTT
T ss_pred CCCeEEEEEECCCCceeecccccccc--cCc------------cccccCceEeEeC-CCEEEEEEEcCccEEEEEECCCC
Confidence 2 3888886 56666665422110 000 000 134688888 78877764 3578888865 4
Q ss_pred cEEEE
Q psy4832 382 KVKIV 386 (770)
Q Consensus 382 ~v~~v 386 (770)
.++.+
T Consensus 327 ~~~~l 331 (662)
T 3azo_A 327 ELVDA 331 (662)
T ss_dssp EEEEC
T ss_pred cEEEe
Confidence 54443
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.34 E-value=1.4 Score=47.57 Aligned_cols=151 Identities=10% Similarity=0.082 Sum_probs=83.4
Q ss_pred CceEEEEcCCCC-EEEEeC--ceEEEEcCCC-----cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEecc
Q psy4832 181 TPVALTSGPDGS-LYVGDF--NLVRRLTPEG-----NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSL 252 (770)
Q Consensus 181 ~P~~la~~~dG~-lyv~d~--~~I~~i~~~G-----~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~ 252 (770)
.+.+|++.|++. ++++-. +.|+.++.+. ........-...-.....++++|.++.++++...++.|+.++..
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 457899999877 555443 4677776543 11111100012233468899998788899888888888888532
Q ss_pred CCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEe-CCC-eEEECCCC---cEEEee
Q psy4832 253 ESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIAD-GTN-IRVVSPEG---IIHTLI 326 (770)
Q Consensus 253 ~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD-~~~-Ir~id~~G---~i~t~~ 326 (770)
.. .....+..+.. .-..+..|++.+++. ++++- ... |+..|... .+.++.
T Consensus 263 ~~--~~~~~~~~~~~----------------------~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 263 NN--NTSKPSHTVDA----------------------HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp CS--CSSSCSEEEEC----------------------CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred CC--CCCcceeEeec----------------------CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence 11 00001111111 112467899999876 56543 333 77776432 233332
Q ss_pred cCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEEEe--CCEEEEEc
Q psy4832 327 GHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHFID--DRVIFKLT 378 (770)
Q Consensus 327 g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv~D--~~~I~~i~ 378 (770)
+. -.....|+++| ++ .++++- .+.|..++
T Consensus 319 ~h----------------------~~~v~~i~~sp-~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 319 SH----------------------KDEIFQVQWSP-HNETILASSGTDRRLHVWD 350 (430)
T ss_dssp CC----------------------SSCEEEEEECS-SCTTEEEEEETTSCCEEEE
T ss_pred cC----------------------CCCEEEEEECC-CCCCEEEEEeCCCcEEEEe
Confidence 21 12356899999 66 566654 35555554
No 224
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.25 E-value=1.3 Score=45.51 Aligned_cols=67 Identities=10% Similarity=0.004 Sum_probs=41.6
Q ss_pred CceEEEEcCCCC--EEEEeC-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGS--LYVGDF-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~--lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
....+++.|+|. |+.+.. +.|+.++. +......+.. ...-.....++++| +.++++-..++.|+.++
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN-NEANLGICRICKYG--DDKLIAASWDGLIEVID 128 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS-CCCCSCEEEEEEET--TTEEEEEETTSEEEEEC
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc-cCCCCceEEEEeCC--CCEEEEEcCCCeEEEEc
Confidence 457889999998 555554 58888886 5433333311 00223457899998 55555555667777774
No 225
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.24 E-value=1.3 Score=45.40 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=36.7
Q ss_pred CceEEEEcCCCCEEEEe-C-ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 181 TPVALTSGPDGSLYVGD-F-NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d-~-~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
...++++.|+|.++++- . +.|+.++.......... .........+.+.+ .+.++++-..++.+..+
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~ 155 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF--VGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLW 155 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEECT-TSSCEEEEETTSCEEEE
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccceeeee--cCCCCceeEEEEee-cCccceeecCCCeEEEE
Confidence 45788999999866643 3 46777765543332221 11223345566665 45555554445556555
No 226
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.16 E-value=1.4 Score=44.93 Aligned_cols=67 Identities=6% Similarity=-0.060 Sum_probs=39.4
Q ss_pred CceEEEEcCCCCEEEEe-C-ceEEEEcCC-C----cEEEEeccCcccccceeEEEEeCC-CCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPDGSLYVGD-F-NLVRRLTPE-G----NVFTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d-~-~~I~~i~~~-G----~v~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~~I~~i~ 250 (770)
...+|++.|+|.++++- . +.|+.++.+ + +....+. ..-.....++++|. ++.++++-..++.|+.++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR---AHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE---CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec---cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 35778899999865543 3 466666543 2 1222221 12334678999874 366666666666666654
No 227
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.02 E-value=2.1 Score=48.21 Aligned_cols=162 Identities=10% Similarity=0.011 Sum_probs=85.0
Q ss_pred cCceEEEEcCCCCEEE-EeC-ceEEEEcCCCcEEEEeccCccc--ccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCc
Q psy4832 180 LTPVALTSGPDGSLYV-GDF-NLVRRLTPEGNVFTVLQLSATQ--VSYQYYLALSPADGHLYISDAEKHQILRVLSLESV 255 (770)
Q Consensus 180 ~~P~~la~~~dG~lyv-~d~-~~I~~i~~~G~v~~~~~~~~~~--~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~ 255 (770)
....++++.|+|.... +.. +.|+.++.++ ....+. .... -..-..++++| +|.+..+-...+.|..++...+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCT
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCc
Confidence 3468899999998554 444 3677776555 222232 1110 12356899999 55544454556777766432110
Q ss_pred c-CCC-CcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECCCC-cE----EEeec
Q psy4832 256 A-DPS-INWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSPEG-II----HTLIG 327 (770)
Q Consensus 256 ~-~~~-g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~~G-~i----~t~~g 327 (770)
. .+. ..+..+-+... .....-..|++.|+| |..+...+ |+..+.++ .+ .++.+
T Consensus 163 l~~~~~i~l~ti~~~~~------------------gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDA------------------GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp TTCCCCEEEEEEECSCT------------------TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred cccccceeeeeeecccc------------------cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 0 000 01222211100 012356789999999 55555555 88887654 21 22321
Q ss_pred CCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEeCCEEEEEcCC-CcEEEE
Q psy4832 328 HHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFIDDRVIFKLTND-LKVKIV 386 (770)
Q Consensus 328 ~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D~~~I~~i~~~-G~v~~v 386 (770)
.. -....++++. +..|-.+..+.|...+.. ++....
T Consensus 224 ~h---------------------~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~ 260 (588)
T 2j04_A 224 AS---------------------RRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSL 260 (588)
T ss_dssp CC---------------------SSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEE
T ss_pred cc---------------------cCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEE
Confidence 11 0135577887 455555556788888855 444333
No 228
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.01 E-value=2.7 Score=47.07 Aligned_cols=99 Identities=10% Similarity=0.075 Sum_probs=64.0
Q ss_pred CCceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCeeEEEEEeCCCCeEEEEEEcc----------CCcEeEEEecCcE
Q psy4832 646 GRFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQVTHIYSPRYGKLISLVYDE----------RGFLIFAQMFRHK 715 (770)
Q Consensus 646 ~g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~~~~~~~p~~g~~~~~~yd~----------~G~l~~~~~~~~~ 715 (770)
.+....-.+.+.|++++.-..+|.+.-|.... ...+......-.+....+.+.+ .|++++.-..+.+
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~ 564 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQS---REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 564 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCC---CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc
Confidence 44566778888899988888888665555432 2122222221256788899988 8888887755544
Q ss_pred EEEE-eCCCCCeEEEEcCCCCEEEEEEeCCCCc
Q psy4832 716 YYIA-TDQCGTPVMVFNQYGETVREIMRSPYGH 747 (770)
Q Consensus 716 ~~~~-~d~~G~~~~~~d~~G~~v~~~~yd~~G~ 747 (770)
.++. .+..+.++.........|..+...+.|+
T Consensus 565 i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 565 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp EEEEESSCTTCCEEETTSSTTCEEEEEEEETTE
T ss_pred EEEEECCCCceechhhhcCccceEEEEEcCCCC
Confidence 4333 3443467777776666678888877787
No 229
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.96 E-value=1.2 Score=47.97 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=39.2
Q ss_pred CcceEEEccCCcEEEEeCCC-eEEECCC--CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCC-eEEE
Q psy4832 293 HPKGLAIKADKTMFIADGTN-IRVVSPE--GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDD-SLHF 368 (770)
Q Consensus 293 ~P~gIavd~~G~lYvaD~~~-Ir~id~~--G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g-~lyv 368 (770)
....|++.++|.++++-... |+..|.. +....++...... ....-.....++++| ++ ++++
T Consensus 179 ~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~--------------~~~~~~~v~~~~~~p-~~~~~l~ 243 (447)
T 3dw8_B 179 HINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPAN--------------MEELTEVITAAEFHP-NSCNTFV 243 (447)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSS--------------GGGCCCCEEEEEECS-SCTTEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeeccccc--------------ccccCcceEEEEECC-CCCcEEE
Confidence 45689999999876664333 7777755 3222222110000 001122467899999 66 6555
Q ss_pred Ee--CCEEEEEc
Q psy4832 369 ID--DRVIFKLT 378 (770)
Q Consensus 369 ~D--~~~I~~i~ 378 (770)
+- .+.|+.++
T Consensus 244 s~~~dg~i~iwd 255 (447)
T 3dw8_B 244 YSSSKGTIRLCD 255 (447)
T ss_dssp EEETTSCEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 43 46666666
No 230
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.86 E-value=2 Score=44.49 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=39.0
Q ss_pred ceEEEEcCC--CCEEEE-eC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcEEEEEec
Q psy4832 182 PVALTSGPD--GSLYVG-DF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQILRVLS 251 (770)
Q Consensus 182 P~~la~~~d--G~lyv~-d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~I~~i~~ 251 (770)
..+|++.++ +.++++ .. +.|+.++.+ ++...+... .........++++|.+ +.++++-..++.|..++.
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 467777765 665554 33 466666643 432222111 1223456789999842 666666666677777753
No 231
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.81 E-value=2.4 Score=44.84 Aligned_cols=27 Identities=15% Similarity=0.276 Sum_probs=19.4
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..+.++++| ++.++++-...+.|+.++
T Consensus 68 ~V~~~~~sp-~~~~l~s~s~D~~v~iWd 94 (380)
T 3iz6_a 68 KVYSLDWTP-EKNWIVSASQDGRLIVWN 94 (380)
T ss_dssp CEEEEEECT-TSSCEEEEETTSEEEEEE
T ss_pred EEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 356888998 666666666677887775
No 232
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.80 E-value=2.5 Score=44.91 Aligned_cols=146 Identities=16% Similarity=0.016 Sum_probs=74.8
Q ss_pred ceEEEEcCCCCE-EEEeC-ceEEEEcCCCcEE-EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCC
Q psy4832 182 PVALTSGPDGSL-YVGDF-NLVRRLTPEGNVF-TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADP 258 (770)
Q Consensus 182 P~~la~~~dG~l-yv~d~-~~I~~i~~~G~v~-~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~ 258 (770)
...+++.|+|.. +.+.. +.|+.++...... ..+ .......-.++++ ++.++++-..++.|..++. .
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~------~ 127 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML----KRADYTAVDTAKL-QMRRFILGTTEGDIKVLDS------N 127 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTS----CSCCEEEEEEECS-SSCEEEEEETTSCEEEECT------T
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEE----ecCCceEEEEEec-CCCEEEEEECCCCEEEEeC------C
Confidence 445778887764 44433 4677776442211 111 0111222334555 6666666666677776632 1
Q ss_pred CCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCCC-eEEECCC-C-cEEEeecCCCCCCC
Q psy4832 259 SINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPE-G-IIHTLIGHHKHHNI 334 (770)
Q Consensus 259 ~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~-G-~i~t~~g~~~~~~~ 334 (770)
.+....... ..-.....|++.+++.+.++ .... |+..+.. + .+.++.+.
T Consensus 128 ~~~~~~~~~---------------------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h------ 180 (420)
T 3vl1_A 128 FNLQREIDQ---------------------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH------ 180 (420)
T ss_dssp SCEEEEETT---------------------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC------
T ss_pred Ccceeeecc---------------------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC------
Confidence 222211110 01123568899998875544 3333 7777643 3 33333322
Q ss_pred cCCCccCCCcccccccccCcceEEEeCCCCeEEEE-e-CCEEEEEcC-CCc
Q psy4832 335 WSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFI-D-DRVIFKLTN-DLK 382 (770)
Q Consensus 335 ~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~-D-~~~I~~i~~-~G~ 382 (770)
-.....++++| ++.++++ . .+.|+.++. .++
T Consensus 181 ----------------~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 181 ----------------RATVTDIAIID-RGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp ----------------SSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTE
T ss_pred ----------------CCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCc
Confidence 12356899999 7764444 4 466777773 344
No 233
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.77 E-value=2.3 Score=44.31 Aligned_cols=27 Identities=26% Similarity=0.274 Sum_probs=18.8
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..+.|+++| +|.+.++-..++.|+.++
T Consensus 18 ~v~~l~~sp-~g~~las~~~D~~i~iw~ 44 (345)
T 3fm0_A 18 RCWFLAWNP-AGTLLASCGGDRRIRIWG 44 (345)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEEE
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEE
Confidence 356899998 677777666666666653
No 234
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.76 E-value=2.7 Score=45.01 Aligned_cols=27 Identities=15% Similarity=0.089 Sum_probs=19.1
Q ss_pred CcceEEEeCCCCeEEEE-eCCEEEEEcCC
Q psy4832 353 WPTGLALSPLDDSLHFI-DDRVIFKLTND 380 (770)
Q Consensus 353 ~P~gla~d~~~g~lyv~-D~~~I~~i~~~ 380 (770)
....|+++| ++.++++ +.+.|+..+..
T Consensus 179 ~v~~~~~~~-~~~~l~s~~d~~i~iwd~~ 206 (447)
T 3dw8_B 179 HINSISINS-DYETYLSADDLRINLWHLE 206 (447)
T ss_dssp CCCEEEECT-TSSEEEEECSSEEEEEETT
T ss_pred ceEEEEEcC-CCCEEEEeCCCeEEEEECC
Confidence 467899999 7775554 35677777755
No 235
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=95.61 E-value=3.4 Score=47.70 Aligned_cols=58 Identities=19% Similarity=0.215 Sum_probs=33.6
Q ss_pred CcceEEEccCCcEEEEeCC-CeEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe-EEEE
Q psy4832 293 HPKGLAIKADKTMFIADGT-NIRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFI 369 (770)
Q Consensus 293 ~P~gIavd~~G~lYvaD~~-~Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~ 369 (770)
.+..+++.++|.+.+++.. .|+..+.. |....++..... .-.....++++| +|+ |.++
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~------------------~~~~v~~~~~Sp-Dg~~l~~~ 78 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKI------------------ESLRAIRYEISP-DREYALFS 78 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTT------------------TTTTCSEEEECT-TSSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccc------------------cccccceEEECC-CCCEEEEE
Confidence 4677888888885444332 38887754 444444422110 001467899999 887 4444
No 236
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.59 E-value=0.37 Score=52.33 Aligned_cols=112 Identities=16% Similarity=0.118 Sum_probs=62.6
Q ss_pred eeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEcc-
Q psy4832 224 QYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKA- 301 (770)
Q Consensus 224 p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~- 301 (770)
-+.|+++|.++++.++-..++.|+.++.. .+. ...+...+ + -..-.+|++.|
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~------~~~~~~~~~~~g---------H-----------~~~V~~l~f~p~ 175 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFG------IKDKPTFIKGIG---------A-----------GGSITGLKFNPL 175 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSS------CCSCCEEECCCS---------S-----------SCCCCEEEECSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECC------CCCceeEEEccC---------C-----------CCCEEEEEEeCC
Confidence 46789998777777776666777766421 111 11111100 0 11246889986
Q ss_pred CCcEEEEeCC-C-eEEECCCCcE-EEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEE
Q psy4832 302 DKTMFIADGT-N-IRVVSPEGII-HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFK 376 (770)
Q Consensus 302 ~G~lYvaD~~-~-Ir~id~~G~i-~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~ 376 (770)
+++++++-+. . |+..|..+.. ..+...... -.+...+++++ ++.++++- ++.|+.
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~-~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTI-------------------NIWFCSLDVSA-SSRMVVTGDNVGNVIL 235 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSC-------------------SCCCCCEEEET-TTTEEEEECSSSBEEE
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCC-------------------CccEEEEEECC-CCCEEEEEeCCCcEee
Confidence 6776665433 3 8888876543 333322211 12345789998 77766654 456666
Q ss_pred EcCCC
Q psy4832 377 LTNDL 381 (770)
Q Consensus 377 i~~~G 381 (770)
++.++
T Consensus 236 wd~~~ 240 (435)
T 4e54_B 236 LNMDG 240 (435)
T ss_dssp EESSS
T ss_pred eccCc
Confidence 66544
No 237
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.46 E-value=2.8 Score=43.22 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=35.0
Q ss_pred cCceEEEEcCCCC-EEEEeC------ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEe
Q psy4832 180 LTPVALTSGPDGS-LYVGDF------NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISD 240 (770)
Q Consensus 180 ~~P~~la~~~dG~-lyv~d~------~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd 240 (770)
.....+++.|||. |+++.. ..|..++.+ |+...+.... . ...++++|.+..|+++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~----~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK----N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES----E-EEEEEECTTSSEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC----C-ccceeECCCCCEEEEEE
Confidence 4567788999996 444321 258888765 4444444321 1 67889998555677764
No 238
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.39 E-value=1.9 Score=44.77 Aligned_cols=64 Identities=14% Similarity=-0.051 Sum_probs=37.0
Q ss_pred cceEEEcc--CCcEEEEeC-CC-eEEECCC-CcEEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEE
Q psy4832 294 PKGLAIKA--DKTMFIADG-TN-IRVVSPE-GIIHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHF 368 (770)
Q Consensus 294 P~gIavd~--~G~lYvaD~-~~-Ir~id~~-G~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv 368 (770)
...|++++ ++.++++-+ .. |+..|.. +....+..... -.....++++| ++.+++
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~--------------------~~~i~~~~~~p-dg~~la 186 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS--------------------DVEYSSGVLHK-DSLLLA 186 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS--------------------SCCCCEEEECT-TSCEEE
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC--------------------CCceEEEEECC-CCCEEE
Confidence 45788888 888766433 32 7777743 44433221110 11256899999 888777
Q ss_pred Ee--CCEEEEEc
Q psy4832 369 ID--DRVIFKLT 378 (770)
Q Consensus 369 ~D--~~~I~~i~ 378 (770)
+- ++.|+.++
T Consensus 187 sg~~dg~i~iwd 198 (343)
T 3lrv_A 187 LYSPDGILDVYN 198 (343)
T ss_dssp EECTTSCEEEEE
T ss_pred EEcCCCEEEEEE
Confidence 63 46666666
No 239
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.32 E-value=1 Score=52.91 Aligned_cols=66 Identities=9% Similarity=0.019 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCEEE-EeC-ceEEEEcCC---CcEEEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYV-GDF-NLVRRLTPE---GNVFTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv-~d~-~~I~~i~~~---G~v~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~I~~i~ 250 (770)
..++++.|+|.+++ +.. +.|+.++.. +.....+. ..-.....++++|.. +.++++-..++.|+.++
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 35677777776444 333 456666543 22232331 122345788998631 66666666667776664
No 240
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.16 E-value=4 Score=43.28 Aligned_cols=63 Identities=14% Similarity=0.016 Sum_probs=34.9
Q ss_pred EEEcCCCCEEEEeCceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 185 LTSGPDGSLYVGDFNLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 185 la~~~dG~lyv~d~~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
++.+++.-+-.+..+.|+.++. +|+....+... .-.....++++| ++.++++-..++.|..++
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETD--ESTYVASVKWSH-DGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECC--TTCCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC--CCCCEEEEEECC-CCCEEEEECCCCeEEEEE
Confidence 4444432222233356777764 46666555321 233467899998 665555555566777664
No 241
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.15 E-value=3.9 Score=45.97 Aligned_cols=46 Identities=7% Similarity=-0.008 Sum_probs=28.6
Q ss_pred CCCcEEEEecCCceEEEEcCCCCCcEEEEEe--cCCCCCCceEEEECCCCC
Q psy4832 546 ATNEIYVFNRYGQHITTRDMTSGKPRYSFLY--SKNTSFGKLSTITDASGN 594 (770)
Q Consensus 546 ~~~e~yvfd~~G~~~~t~d~~tg~~~y~~~Y--d~~~~~G~L~~vtd~~G~ 594 (770)
..+++.+++..++...+.........+.... ..+ |....+.+.+|.
T Consensus 243 ~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d---~~~La~a~edG~ 290 (588)
T 2j04_A 243 CPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE---STILLMSNKTSY 290 (588)
T ss_dssp CSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS---CEEEEECSSCEE
T ss_pred eCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC---CCEEEEEcCCCC
Confidence 3578888987777764444334444555555 444 666777776776
No 242
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.05 E-value=4 Score=42.69 Aligned_cols=30 Identities=13% Similarity=0.127 Sum_probs=19.1
Q ss_pred eEEEccCCc-EEEEeCCC-eEEECCC-CcEEEe
Q psy4832 296 GLAIKADKT-MFIADGTN-IRVVSPE-GIIHTL 325 (770)
Q Consensus 296 gIavd~~G~-lYvaD~~~-Ir~id~~-G~i~t~ 325 (770)
++++.++|. |+++.... |+.++.+ |....+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 457888886 66666544 8888755 444433
No 243
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.01 E-value=3.5 Score=41.75 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=40.2
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCCC---cEEEEeccCcccccceeEEEEeCC-CCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPEG---NVFTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~G---~v~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~~I~~i~ 250 (770)
-..++++++|.++++-. +.|+.++.++ +....+. ..-.....+++++. ++.++++-..++.|+..+
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~---gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc---cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 36788999998776543 4677766542 2222221 11223468888752 477777777777777764
No 244
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.99 E-value=4.2 Score=42.56 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=18.4
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEec
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVLS 251 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~~ 251 (770)
....|+++|.++.++++-..++.|+.++.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~ 73 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDL 73 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEEC
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEEC
Confidence 35678888745666666555666666643
No 245
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.98 E-value=3.8 Score=42.08 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=64.9
Q ss_pred CceEEEEcCC----CCEEE-EeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccC
Q psy4832 181 TPVALTSGPD----GSLYV-GDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLE 253 (770)
Q Consensus 181 ~P~~la~~~d----G~lyv-~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~ 253 (770)
...++++.|+ |.+++ +.. +.|+.++.+ ++....+. ..-.....++++|.++.++++-..++.|+.++.
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~-- 145 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV---GHGNAINELKFHPRDPNLLLSVSKDHALRLWNI-- 145 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE---SCCSCEEEEEECSSCTTEEEEEETTSCEEEEET--
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec---CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe--
Confidence 3567888877 44444 444 478888854 66655542 223456789999856777777666777777743
Q ss_pred CccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEe-CCC-eEEECCC
Q psy4832 254 SVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIAD-GTN-IRVVSPE 319 (770)
Q Consensus 254 ~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD-~~~-Ir~id~~ 319 (770)
.++........-. ..-.....|++++++..+++- ... |+..+..
T Consensus 146 ----~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 146 ----QTDTLVAIFGGVE------------------GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp ----TTTEEEEEECSTT------------------SCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred ----ecCeEEEEecccc------------------cccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 2233322221000 011246688998888755543 333 7777644
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.30 E-value=6.1 Score=41.38 Aligned_cols=149 Identities=14% Similarity=0.188 Sum_probs=82.1
Q ss_pred CCCEEEEeC-ceEEEEcC-CCcEEEEeccCcc-------cccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCC
Q psy4832 190 DGSLYVGDF-NLVRRLTP-EGNVFTVLQLSAT-------QVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSI 260 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~-------~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g 260 (770)
++.||+++. +.|..++. +|++......... .......++++ ++.||+.... +.|+.++. .+|
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~~-g~l~a~d~------~tG 123 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGSEK-AQVYALNT------SDG 123 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEETT-SEEEEEET------TTC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEcCC-CEEEEEEC------CCC
Confidence 688999986 58999997 5888755443211 11112344555 7899998754 68888853 245
Q ss_pred cEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECC-CCcEEEeecCCCCCCCcCCC
Q psy4832 261 NWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSP-EGIIHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 261 ~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~-~G~i~t~~g~~~~~~~~~p~ 338 (770)
...--...+.. ....| +++ ++.||+..... |..+|. +|++.-........
T Consensus 124 ~~~W~~~~~~~------------------~~~~p---~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~------ 175 (376)
T 3q7m_A 124 TVAWQTKVAGE------------------ALSRP---VVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS------ 175 (376)
T ss_dssp CEEEEEECSSC------------------CCSCC---EEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC--------
T ss_pred CEEEEEeCCCc------------------eEcCC---EEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc------
Confidence 54322211100 01112 232 67888876555 888885 67655433221100
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcC-CCcEEEEe
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTN-DLKVKIVA 387 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~-~G~v~~va 387 (770)
..+......+++ ++.||+.. ++.|+.+++ +|++....
T Consensus 176 ----------~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 176 ----------LSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp -------------CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEE
T ss_pred ----------eeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 001111223444 67888876 578999985 68765433
No 247
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.24 E-value=5.6 Score=40.77 Aligned_cols=110 Identities=9% Similarity=-0.083 Sum_probs=62.9
Q ss_pred ceEEEEEec-CCceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCeeEEEEEeCCCCeEEEEEEccCCcEeEEEecCc-
Q psy4832 637 DLKIRALKK-GRFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQVTHIYSPRYGKLISLVYDERGFLIFAQMFRH- 714 (770)
Q Consensus 637 g~l~~~~~~-~g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~~~~~~~p~~g~~~~~~yd~~G~l~~~~~~~~- 714 (770)
+.++..... .+....-.+.+.|+++..-..+|.+.-|..... ++...... ........+.+.|+.+.....+.
T Consensus 208 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 282 (369)
T 3zwl_B 208 YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL----QVLKKYET-DCPLNTAVITPLKEFIILGGGQEA 282 (369)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEEC-SSCEEEEEECSSSSEEEEEECCC-
T ss_pred cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC----ceeeeecC-CCCceeEEecCCCceEEEeecCCC
Confidence 445544443 444556777777887776667775444433221 12222223 56677788888888777764432
Q ss_pred -------------EEEEEeCCCCCeEEEEcCCCCEEEEEEeCCCCceEEe
Q psy4832 715 -------------KYYIATDQCGTPVMVFNQYGETVREIMRSPYGHIVYD 751 (770)
Q Consensus 715 -------------~~~~~~d~~G~~~~~~d~~G~~v~~~~yd~~G~~~~~ 751 (770)
...+.--..+.++.........|..+...|.|+.+..
T Consensus 283 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 283 KDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp ------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE
Confidence 3333334455666555555455677788888876633
No 248
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.99 E-value=2.7 Score=43.86 Aligned_cols=75 Identities=11% Similarity=0.107 Sum_probs=45.4
Q ss_pred CCceEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCee-EEEEEeCCCCeEEEEEEccCCcEeEEEecCcEEEEEeC
Q psy4832 646 GRFDVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQ-VTHIYSPRYGKLISLVYDERGFLIFAQMFRHKYYIATD 721 (770)
Q Consensus 646 ~g~~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~-~~~~~~p~~g~~~~~~yd~~G~l~~~~~~~~~~~~~~d 721 (770)
.+....-.+.+.|++++.-..+|.+.-|.......+.+ +..+... .+....+.+.+.|++++.-..+....+-.+
T Consensus 205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS-QLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS-SSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC-CCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 34455667778888877777788666666555544222 2222333 566788888888887776655555544444
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.95 E-value=7.1 Score=40.87 Aligned_cols=191 Identities=14% Similarity=0.156 Sum_probs=98.2
Q ss_pred CCCCEEEEeC-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCcEEEEE
Q psy4832 189 PDGSLYVGDF-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSINWEVAV 266 (770)
Q Consensus 189 ~dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~~~~va 266 (770)
.+|.||++.. +.|..++. +|++.............| ++. ++.||+... ++.|+.++. .+|...-..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p---~~~--~~~v~v~~~-~g~l~~~d~------~tG~~~W~~ 169 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRP---VVS--DGLVLIHTS-NGQLQALNE------ADGAVKWTV 169 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCC---EEE--TTEEEEECT-TSEEEEEET------TTCCEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCC---EEE--CCEEEEEcC-CCeEEEEEC------CCCcEEEEE
Confidence 3789999876 58999996 598875554322222222 343 577777653 467887752 245433222
Q ss_pred CCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCCC-eEEECC-CCcEEEeecCCCCCCCcCCCccCCCc
Q psy4832 267 GSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGTN-IRVVSP-EGIIHTLIGHHKHHNIWSPFNCHRSF 344 (770)
Q Consensus 267 G~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~~-Ir~id~-~G~i~t~~g~~~~~~~~~p~~~~~~~ 344 (770)
...... . .+......+++ ++.||+..... |..+|+ +|++.-......... .
T Consensus 170 ~~~~~~------~----------~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~----------~ 222 (376)
T 3q7m_A 170 NLDMPS------L----------SLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG----------S 222 (376)
T ss_dssp ECCC---------------------CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC--------------
T ss_pred eCCCCc------e----------eecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC----------C
Confidence 111100 0 00011122333 57788875444 888885 576543322111000 0
Q ss_pred cccccccc-CcceEEEeCCCCeEEEEe-CCEEEEEcC-CCcEEEEecCCCCCCCCCCCCccccccccccccccccCCccc
Q psy4832 345 PASTAQLQ-WPTGLALSPLDDSLHFID-DRVIFKLTN-DLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVR 421 (770)
Q Consensus 345 ~~~~~~l~-~P~gla~d~~~g~lyv~D-~~~I~~i~~-~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (770)
.....+. .....++. ++.||+.. ++.|+.++. +|++.....
T Consensus 223 -~~~~~~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG~~~w~~~--------------------------------- 266 (376)
T 3q7m_A 223 -TEIDRLSDVDTTPVVV--NGVVFALAYNGNLTALDLRSGQIMWKRE--------------------------------- 266 (376)
T ss_dssp --------CCCCCCEEE--TTEEEEECTTSCEEEEETTTCCEEEEEC---------------------------------
T ss_pred -cccccccccCCCcEEE--CCEEEEEecCcEEEEEECCCCcEEeecc---------------------------------
Confidence 0000010 00111334 78899987 678888885 576543321
Q ss_pred ccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcEE
Q psy4832 422 ASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRMF 464 (770)
Q Consensus 422 a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i~ 464 (770)
+..+.+++++ ++.||++...+. +..+++ +|++.
T Consensus 267 -----~~~~~~~~~~-~~~l~~~~~~g~----l~~~d~~tG~~~ 300 (376)
T 3q7m_A 267 -----LGSVNDFIVD-GNRIYLVDQNDR----VMALTIDGGVTL 300 (376)
T ss_dssp -----CCCEEEEEEE-TTEEEEEETTCC----EEEEETTTCCEE
T ss_pred -----CCCCCCceEE-CCEEEEEcCCCe----EEEEECCCCcEE
Confidence 1123455554 678999987643 677774 67753
No 250
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.78 E-value=7.5 Score=40.51 Aligned_cols=64 Identities=5% Similarity=-0.149 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCEEEEeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.++++.|||.++.+-. +.++.++.+ ++...... +.....+++.+..+.+.++-...+.|+.++
T Consensus 22 V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 22 VTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQE-----MRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEE-----CSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeee-----cCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 46899999999776544 455555533 22221111 112345666664555556655556777664
No 251
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.69 E-value=7.1 Score=39.98 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=59.0
Q ss_pred cceEEEccC----CcEEE-EeCCC-eEEECCC-CcE-EEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCe
Q psy4832 294 PKGLAIKAD----KTMFI-ADGTN-IRVVSPE-GII-HTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDS 365 (770)
Q Consensus 294 P~gIavd~~----G~lYv-aD~~~-Ir~id~~-G~i-~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~ 365 (770)
...+++.++ |.+++ +.... |+..+.. +.. ..+.+.. .....|+++|.++.
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----------------------~~i~~~~~~~~~~~ 129 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG----------------------NAINELKFHPRDPN 129 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC----------------------SCEEEEEECSSCTT
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC----------------------CcEEEEEECCCCCC
Confidence 457888777 45444 44444 8888744 433 3332221 23567888874455
Q ss_pred EE-EEe-CCEEEEEcC-CCcEEEEecC-CCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCE
Q psy4832 366 LH-FID-DRVIFKLTN-DLKVKIVAGI-PLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDL 441 (770)
Q Consensus 366 ly-v~D-~~~I~~i~~-~G~v~~vaG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~l 441 (770)
++ .+. ++.|+.++. +++....... ..+ -.....|+++|+|.+
T Consensus 130 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 130 LLLSVSKDHALRLWNIQTDTLVAIFGGVEGH----------------------------------RDEVLSADYDLLGEK 175 (366)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECSTTSC----------------------------------SSCEEEEEECTTSSE
T ss_pred EEEEEeCCCeEEEEEeecCeEEEEecccccc----------------------------------cCceeEEEECCCCCE
Confidence 44 444 567777774 3443332211 000 134688999999986
Q ss_pred EEEeCCCCceeeEEEEcC
Q psy4832 442 YIADIDARKVNALRVIDS 459 (770)
Q Consensus 442 yVaD~~~~ri~~i~~i~~ 459 (770)
+++-...+. |+..+.
T Consensus 176 l~~~~~dg~---i~i~d~ 190 (366)
T 3k26_A 176 IMSCGMDHS---LKLWRI 190 (366)
T ss_dssp EEEEETTSC---EEEEES
T ss_pred EEEecCCCC---EEEEEC
Confidence 666655554 455553
No 252
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.51 E-value=6.9 Score=39.25 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=42.1
Q ss_pred EEEEcCCCCEEEEeCceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 184 ALTSGPDGSLYVGDFNLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 184 ~la~~~dG~lyv~d~~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
.|+..+++-|-++-.+.|+..+. +|+...++... ..-..-..++++| ++.+.++-..++.|+.++
T Consensus 30 ~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~-~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~ 95 (318)
T 4ggc_A 30 LVDWSSGNVLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIK-EGNYLAVGTSSAEVQLWD 95 (318)
T ss_dssp CEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEec-CCCCeEEEEEECC-CCCEEEEEECCCcEEEee
Confidence 36677776555655568888875 57777666421 1223357899997 677767766667776664
No 253
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.31 E-value=7.8 Score=39.28 Aligned_cols=65 Identities=9% Similarity=0.078 Sum_probs=37.7
Q ss_pred ceEEEEcCC-CCEEEEeC--ceEEEEcCC--Cc----EEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPD-GSLYVGDF--NLVRRLTPE--GN----VFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~d-G~lyv~d~--~~I~~i~~~--G~----v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.+|++.|+ ++++++-. +.|+.++.+ .. ....+ ...-.....++++| ++.+.++-..++.|+..+
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l---~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL---RGHSHFVSDVVISS-DGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE---eCCCCCEEEEEECC-CCCEEEEEcccccceEEe
Confidence 367888886 57766432 455555422 11 11222 11223467899997 777776666667777664
No 254
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=93.07 E-value=16 Score=42.33 Aligned_cols=56 Identities=18% Similarity=0.111 Sum_probs=34.1
Q ss_pred EEEEcCCCCEEEEeCceEEEEcCC-CcEEEEeccCccccc--ceeEEEEeCCCCcEEEE
Q psy4832 184 ALTSGPDGSLYVGDFNLVRRLTPE-GNVFTVLQLSATQVS--YQYYLALSPADGHLYIS 239 (770)
Q Consensus 184 ~la~~~dG~lyv~d~~~I~~i~~~-G~v~~~~~~~~~~~~--~p~~lav~p~~g~lyvs 239 (770)
.+++.|||.+++++.+.|+.++.+ |+...++........ ...+++++|....|.++
T Consensus 21 ~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~ 79 (740)
T 4a5s_A 21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLE 79 (740)
T ss_dssp CEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEE
T ss_pred ccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEE
Confidence 577889998877776688888854 665555542211111 12458889844445444
No 255
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.05 E-value=8.2 Score=38.85 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=39.7
Q ss_pred CceEEEEcC--CCCEEEEe-C-ceEEEEcCCC----------cEEEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcE
Q psy4832 181 TPVALTSGP--DGSLYVGD-F-NLVRRLTPEG----------NVFTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQ 245 (770)
Q Consensus 181 ~P~~la~~~--dG~lyv~d-~-~~I~~i~~~G----------~v~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~ 245 (770)
...++++.| ++.++++- . +.|+.++.+. +....+. ..-.....++++|.. +.++++-..++.
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN---DSKGSLYSVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETTCE
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec---ccCCceeEEEEcCCCCCcEEEEecCCCc
Confidence 357788888 57766543 3 4666666432 2222221 223346789999731 666666666677
Q ss_pred EEEEec
Q psy4832 246 ILRVLS 251 (770)
Q Consensus 246 I~~i~~ 251 (770)
|+.++.
T Consensus 136 v~iwd~ 141 (351)
T 3f3f_A 136 LRLYDA 141 (351)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 777753
No 256
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.84 E-value=10 Score=39.42 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=40.3
Q ss_pred ceEEEEcC-CCCEEEEeC--ceEEEEcCCC-cEEEEec------cC----cccccceeEEEEeCCCCcEEEEeCCCcEEE
Q psy4832 182 PVALTSGP-DGSLYVGDF--NLVRRLTPEG-NVFTVLQ------LS----ATQVSYQYYLALSPADGHLYISDAEKHQIL 247 (770)
Q Consensus 182 P~~la~~~-dG~lyv~d~--~~I~~i~~~G-~v~~~~~------~~----~~~~~~p~~lav~p~~g~lyvsd~~~~~I~ 247 (770)
..+|++.| +|.++++-. +.|+.++.+. .....+. .. ...-.....++++|.++.++++-..++.|.
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 125 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLK 125 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEE
T ss_pred EEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEE
Confidence 46788888 888665432 4677776442 2111100 00 012334678999986676777766667777
Q ss_pred EEe
Q psy4832 248 RVL 250 (770)
Q Consensus 248 ~i~ 250 (770)
.++
T Consensus 126 iwd 128 (408)
T 4a11_B 126 VWD 128 (408)
T ss_dssp EEE
T ss_pred Eee
Confidence 774
No 257
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.80 E-value=10 Score=39.36 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=33.4
Q ss_pred eEEEEcCCCCE--EEEeC---ceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 183 VALTSGPDGSL--YVGDF---NLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 183 ~~la~~~dG~l--yv~d~---~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..+++.|||.. |+.+. ..|+.++.++.....+.... ......++++|.+..|+++... ..|+.++
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~--~~~~~~~~~spdg~~l~~~~~~-~~l~~~d 108 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK--GDNTFGGFISTDERAFFYVKNE-LNLMKVD 108 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSS--CBCTTTCEECTTSSEEEEEETT-TEEEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCC--CCccccceECCCCCEEEEEEcC-CcEEEEE
Confidence 44567788863 33333 26777876644333331111 1111236778755556555443 4677775
No 258
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.54 E-value=10 Score=38.67 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=40.2
Q ss_pred CceEEEEcCC---CCEEEE-eC-ceEEEEcCC--CcEE-EEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 181 TPVALTSGPD---GSLYVG-DF-NLVRRLTPE--GNVF-TVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 181 ~P~~la~~~d---G~lyv~-d~-~~I~~i~~~--G~v~-~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
.-.+|++.|+ |.++++ .. +.|+.++.+ +... ..+. ..-.....++++| ++.++++-..++.|+.++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ---MHTGPVLDVCWSD-DGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE---ECSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec---cccCCEEEEEECc-CCCEEEEEcCCCcEEEEE
Confidence 3578889998 565544 43 456665533 5443 3332 1233467899998 666666666667787775
No 259
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.17 E-value=24 Score=42.11 Aligned_cols=215 Identities=11% Similarity=0.024 Sum_probs=107.8
Q ss_pred CceEEEEcCCCCEEEEeC--ceEEEEcCCCcEEE-EeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccC
Q psy4832 181 TPVALTSGPDGSLYVGDF--NLVRRLTPEGNVFT-VLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVAD 257 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~--~~I~~i~~~G~v~~-~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~ 257 (770)
...+|+++|+|.+.++-. +.|+.++..+.... ... .-.....|+++| |.+.++-..++.|+.++..
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~----~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~----- 87 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE----DRSAIKEMRFVK--GIYLVVINAKDTVYVLSLY----- 87 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS----SCCCEEEEEEET--TTEEEEEETTCEEEEEETT-----
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC----CCCCEEEEEEcC--CCEEEEEECcCeEEEEECC-----
Confidence 357899999998766543 58888886654332 221 122457899998 5555555556777777431
Q ss_pred CCCcE-EEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEECCCC-cEEEeecCCCCCC
Q psy4832 258 PSINW-EVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVVSPEG-IIHTLIGHHKHHN 333 (770)
Q Consensus 258 ~~g~~-~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~id~~G-~i~t~~g~~~~~~ 333 (770)
++.. ..+... .....++++++++ |+++.... |+..|.+. .+..+.-...
T Consensus 88 -~~~~~~~~~~~-----------------------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~--- 140 (902)
T 2oaj_A 88 -SQKVLTTVFVP-----------------------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL--- 140 (902)
T ss_dssp -TCSEEEEEECS-----------------------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCH---
T ss_pred -CCcEEEEEcCC-----------------------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccc---
Confidence 2222 111100 1245788888887 44554444 88887553 3322110000
Q ss_pred CcCCCccCCCcccccccccCcceEEEeCCCCe-EEEEe-CCEEEEEcC-CCcE-EEEecCCCCCCCCCCCCccccccccc
Q psy4832 334 IWSPFNCHRSFPASTAQLQWPTGLALSPLDDS-LHFID-DRVIFKLTN-DLKV-KIVAGIPLHCRTGDKDKRDFKDKQSK 409 (770)
Q Consensus 334 ~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~-lyv~D-~~~I~~i~~-~G~v-~~vaG~~~~~~~~~~~~~~~~~~~~~ 409 (770)
+.. .............|+++|.++. |.++. ++.| ..+. .++. ..+.+............
T Consensus 141 -~~~------~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~--------- 203 (902)
T 2oaj_A 141 -QKS------SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFS--------- 203 (902)
T ss_dssp -HHH------HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTC---------
T ss_pred -ccc------ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccc---------
Confidence 000 0000112335678999983334 44443 4666 7774 3443 33332200000000000
Q ss_pred cccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcE
Q psy4832 410 TKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRM 463 (770)
Q Consensus 410 ~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i 463 (770)
.......-....+++++|+|.++++-...+. |+..|. +|+.
T Consensus 204 ----------~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~---i~lWd~~~g~~ 245 (902)
T 2oaj_A 204 ----------EKTNEKRTPKVIQSLYHPNSLHIITIHEDNS---LVFWDANSGHM 245 (902)
T ss_dssp ----------CCTTSCBCCCEEEEEECTTSSEEEEEETTCC---EEEEETTTCCE
T ss_pred ----------cccccccCCCeEEEEEcCCCCEEEEEECCCe---EEEEECCCCcE
Confidence 0000011134689999999997777666554 455553 4554
No 260
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.15 E-value=11 Score=38.26 Aligned_cols=25 Identities=12% Similarity=-0.051 Sum_probs=16.4
Q ss_pred CcceEEEeCCCC-eEEEEe-----CCEEEEEc
Q psy4832 353 WPTGLALSPLDD-SLHFID-----DRVIFKLT 378 (770)
Q Consensus 353 ~P~gla~d~~~g-~lyv~D-----~~~I~~i~ 378 (770)
....|+++| ++ .|.++- ++.|+.++
T Consensus 20 ~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~ 50 (357)
T 3i2n_A 20 TVFDCKWVP-CSAKFVTMGNFARGTGVIQLYE 50 (357)
T ss_dssp CEEEEEECT-TSSEEEEEEC--CCCEEEEEEE
T ss_pred ceEEEEEcC-CCceEEEecCccCCCcEEEEEe
Confidence 457899999 66 455554 35666666
No 261
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.97 E-value=6.3 Score=46.10 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=39.8
Q ss_pred ceEEEEcCC--CCEEEEe-C-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcEEEEEec
Q psy4832 182 PVALTSGPD--GSLYVGD-F-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQILRVLS 251 (770)
Q Consensus 182 P~~la~~~d--G~lyv~d-~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~I~~i~~ 251 (770)
..++++.++ |+++++- . +.|+.++.+ ++...+... .........++++|.. +.++++-..++.|..++.
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 467788776 7755543 3 466666644 332222111 1223446789999842 667777667778877753
No 262
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.90 E-value=12 Score=38.20 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=38.8
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCC--------CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPE--------GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~--------G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
..+|++.|+|.++++-. +.|+.++.+ .+....+. ..-.....++++| ++.++++-..++.|+.++
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE---GHENEVKGVAWSN-DGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-------CEEEEEECT-TSCEEEEEETTSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc---CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEe
Confidence 46788999998766543 466666643 12222221 1223457899998 677777766667777664
No 263
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.45 E-value=24 Score=40.61 Aligned_cols=56 Identities=5% Similarity=0.039 Sum_probs=33.4
Q ss_pred ceEEEEcCCCCEE--EEeCc-----eEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeC
Q psy4832 182 PVALTSGPDGSLY--VGDFN-----LVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDA 241 (770)
Q Consensus 182 P~~la~~~dG~ly--v~d~~-----~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~ 241 (770)
-.++++.|||... ..+.. .|+.++.+ |+...... ... ...+++++|.+..||++..
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~---~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERV---KFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEE---CSCCEEECTTSSEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCc---ccceEEEEeCCCEEEEEEE
Confidence 3578899999843 33321 78888865 45443211 011 1357899985566777654
No 264
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.62 E-value=20 Score=38.09 Aligned_cols=63 Identities=8% Similarity=-0.045 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCEEEEe-C-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGD-F-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d-~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
-.+|++.|+|.++++- . +.|+.++. +++....+.. .-.....++. ++.+.++-.....|+..+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~---h~~~v~~~s~---~~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS---HSARVGSLSW---NSYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEE---ETTEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC---CCCceEEEee---CCCEEEEEeCCCceeEee
Confidence 3678999999866643 3 47777774 4555544421 1122334444 355666666666776664
No 265
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=90.44 E-value=9.8 Score=43.83 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=20.1
Q ss_pred cceEEEeCCCCe-EEEEeCCEEEEEcCC-CcE
Q psy4832 354 PTGLALSPLDDS-LHFIDDRVIFKLTND-LKV 383 (770)
Q Consensus 354 P~gla~d~~~g~-lyv~D~~~I~~i~~~-G~v 383 (770)
...++++| +|+ |.++..+.|+.++.+ |+.
T Consensus 112 ~~~~~~SP-DG~~la~~~~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 112 IQYLCWSP-VGSKLAYVYQNNIYLKQRPGDPP 142 (719)
T ss_dssp BCCEEECS-STTCEEEEETTEEEEESSTTSCC
T ss_pred cccceECC-CCCEEEEEECCeEEEEeCCCCCc
Confidence 45688999 774 666667788888853 443
No 266
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=90.33 E-value=30 Score=39.78 Aligned_cols=58 Identities=19% Similarity=0.301 Sum_probs=38.4
Q ss_pred CCCEEEEeC-ceEEEEcC-CCcEEEEeccCcccc--------cceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF-NLVRRLTP-EGNVFTVLQLSATQV--------SYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~--------~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|.||++.. +.|..+|. +|++.-........- ....+++++ ++.||+... +++++.++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~-dg~l~alD 144 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW-DGRLIALD 144 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT-TSEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC-CCEEEEEE
Confidence 788999886 68899985 688876554321110 112466776 688888754 46788885
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=90.20 E-value=3.7 Score=47.55 Aligned_cols=58 Identities=16% Similarity=0.132 Sum_probs=32.9
Q ss_pred eEEEEcCCCCEEEEeC-ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEe
Q psy4832 183 VALTSGPDGSLYVGDF-NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISD 240 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~-~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd 240 (770)
..+++.|||.++.+.. +.|+.++.+ |+...++............++++|.+..|.++.
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~ 78 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLES 78 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEE
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEe
Confidence 3667778886555544 478888765 555555431110001257889998444455543
No 268
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.32 E-value=24 Score=37.28 Aligned_cols=157 Identities=8% Similarity=0.017 Sum_probs=76.9
Q ss_pred CCeEEEC-CCccEEecccCCCeEEEEeccCccCCccCCCCCcccccccccCceEEEEcCCCCEEEEe-C-ceEEEEcC--
Q psy4832 132 EGILQKG-DGSSLHLKHEFPRTVSVVMGTGLQRPLVCKDCDGVARDARLLTPVALTSGPDGSLYVGD-F-NLVRRLTP-- 206 (770)
Q Consensus 132 ~gil~~~-dG~~~~~~~~~~~~i~~v~g~G~~~~~~~~~~~g~~~~~~l~~P~~la~~~dG~lyv~d-~-~~I~~i~~-- 206 (770)
..+.... +|..+.... ..+.|.+..-....... +..+. .....-....+|++.|++.++++- . +.|+.++.
T Consensus 67 ~~~~~s~~~~~~l~s~s-~dg~v~vwd~~~~~~~~-~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 67 TSSAVSPGETPYLITGS-DQGVIKIWNLKEIIVGE-VYSSS--LTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp EEEEEECSSSCEEEEEE-TTSEEEEEEHHHHHTTC-CCSCS--EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCCCEEEEec-CCceEEEeECcccccCc-cccee--eeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 3455666 776554444 66777776543210000 00000 000112346789999988866543 3 45665543
Q ss_pred --CCcEEEEeccCc-------c--cccceeEEE--EeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc-EEEEECCCccc
Q psy4832 207 --EGNVFTVLQLSA-------T--QVSYQYYLA--LSPADGHLYISDAEKHQILRVLSLESVADPSIN-WEVAVGSGERC 272 (770)
Q Consensus 207 --~G~v~~~~~~~~-------~--~~~~p~~la--v~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~-~~~vaG~g~~~ 272 (770)
+|+......... . .-.....++ +++ ++.++++-..++.|+.++.. ++. +..+.+..
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~------~~~~~~~~~~~~--- 212 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIR------TLERLQIIENSP--- 212 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETT------TCCEEEEEECCG---
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCC------CCeeeEEEccCC---
Confidence 455444332100 0 111223333 334 56666666667788777531 222 22222210
Q ss_pred cCCCCCCcCCCcccccccccCcceEEEccCCcEEEE-eCCC-eEEECCC
Q psy4832 273 IPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIA-DGTN-IRVVSPE 319 (770)
Q Consensus 273 ~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYva-D~~~-Ir~id~~ 319 (770)
.-.....|++++++.+.++ .... |+..|..
T Consensus 213 -----------------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 213 -----------------RHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp -----------------GGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred -----------------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 1124568899988875554 3333 7777743
No 269
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.24 E-value=20 Score=36.26 Aligned_cols=66 Identities=11% Similarity=0.021 Sum_probs=39.0
Q ss_pred ceEEEEcCCCCEEEEeC--ceEEEEcCC-CcE--EEEeccCcccccceeEEEEeCC-CCcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGPDGSLYVGDF--NLVRRLTPE-GNV--FTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~--~~I~~i~~~-G~v--~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~~I~~i~ 250 (770)
-..++++++|.++++-. +.|+.++.. +.. ...+. ..-.....+++++. ++.++++-..++.|+..+
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~---gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR---GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE---CCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc---CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 36788889998766543 466666643 332 22221 11233568888642 467777766667777664
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.20 E-value=34 Score=38.73 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=40.0
Q ss_pred CCCEEEEeC--ceEEEEcC--CCcEEEEeccCcccc--------cceeEEEEeCCCCc----EEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF--NLVRRLTP--EGNVFTVLQLSATQV--------SYQYYLALSPADGH----LYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~--~~I~~i~~--~G~v~~~~~~~~~~~--------~~p~~lav~p~~g~----lyvsd~~~~~I~~i~ 250 (770)
+|.||++.. +.|..+|. +|+..-......... ....++++.|.++. ||+... +++++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlD 137 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALN 137 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEE
Confidence 688999886 57999987 799886654322111 11246788544677 888754 46888885
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=87.63 E-value=26 Score=35.57 Aligned_cols=43 Identities=9% Similarity=-0.028 Sum_probs=24.4
Q ss_pred eEEEEcCCC-cEEEEeccCcccccceeEEEEeCCCCcEEEEeC----CCcEEEEEe
Q psy4832 200 LVRRLTPEG-NVFTVLQLSATQVSYQYYLALSPADGHLYISDA----EKHQILRVL 250 (770)
Q Consensus 200 ~I~~i~~~G-~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~----~~~~I~~i~ 250 (770)
.|+.++.++ +...+ .....++++|.+..|+++.. ...+|+.++
T Consensus 44 ~l~~~d~~~~~~~~l--------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 44 TIVIENLKNNARRFI--------ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEEEETTTCCEEEE--------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEeCCCCceEEc--------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 566666554 33332 23567899985555665543 234577774
No 272
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.38 E-value=34 Score=36.58 Aligned_cols=27 Identities=26% Similarity=0.289 Sum_probs=19.6
Q ss_pred ceEEEeCCCCeEEEE-eCCEEEEEc-CCCc
Q psy4832 355 TGLALSPLDDSLHFI-DDRVIFKLT-NDLK 382 (770)
Q Consensus 355 ~gla~d~~~g~lyv~-D~~~I~~i~-~~G~ 382 (770)
..|++++ +|++.++ ..+.|+.++ .+|+
T Consensus 8 ~~v~~s~-dg~~l~~~~~~~i~v~d~~~g~ 36 (450)
T 2vdu_B 8 QNLLTSR-DGSLVFAIIKNCILSFKYQSPN 36 (450)
T ss_dssp CEEEECS-SSSEEEEEETTEEEEEEEETTT
T ss_pred EEEEecC-CCCEEEEEeCCeEEEEECCCCC
Confidence 4688998 7775544 478888888 5676
No 273
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=86.62 E-value=37 Score=36.21 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=21.4
Q ss_pred CeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCcE
Q psy4832 429 SLTALAFSPTGDLYIADIDARKVNALRVIDS-TGRM 463 (770)
Q Consensus 429 ~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~i 463 (770)
....++++++|..+++-...+. |+..+. +|+.
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~---i~vwd~~~~~~ 344 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTT---IRIWDLENGEL 344 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSC---EEEEETTTTEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCc---EEEEECCCCcE
Confidence 3688999999886666665554 566664 4543
No 274
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=85.64 E-value=31 Score=34.44 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=37.3
Q ss_pred ceEEEEcC--CCCEEEEe-C-ceEEEEcCC-CcE--EEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGP--DGSLYVGD-F-NLVRRLTPE-GNV--FTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~--dG~lyv~d-~-~~I~~i~~~-G~v--~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~I~~i~ 250 (770)
-.++++.+ +|.++++- . +.|+..+.. |+. ...+. ..-.....++++|.. +.++++-..++.|+.++
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd 129 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVE 129 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence 35677765 47766643 3 467777654 321 11111 112345789998742 66666666667777664
No 275
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.45 E-value=25 Score=39.04 Aligned_cols=146 Identities=13% Similarity=0.030 Sum_probs=79.6
Q ss_pred CceEEEEcCCCCEEEEeC-ceEEEEcCC-Cc-EEEEeccCcccccceeEE--EEeCCCC-cEEEEeCCCcEEEEEeccCC
Q psy4832 181 TPVALTSGPDGSLYVGDF-NLVRRLTPE-GN-VFTVLQLSATQVSYQYYL--ALSPADG-HLYISDAEKHQILRVLSLES 254 (770)
Q Consensus 181 ~P~~la~~~dG~lyv~d~-~~I~~i~~~-G~-v~~~~~~~~~~~~~p~~l--av~p~~g-~lyvsd~~~~~I~~i~~~~~ 254 (770)
...++++.+++.|..+.. +.|+.++.+ +. ....+. ..-..-..| ++.| ++ .++++-...+.|+.++..
T Consensus 268 ~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~---~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~-- 341 (524)
T 2j04_B 268 LITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQ---VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPK-- 341 (524)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEE---CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGG--
T ss_pred CEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEee---cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECC--
Confidence 356788877766666665 478888765 32 122221 111234566 3454 66 788887777888777421
Q ss_pred ccCCCCc-EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeCC-C-eEEECC-CCc-EEEeecCC
Q psy4832 255 VADPSIN-WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADGT-N-IRVVSP-EGI-IHTLIGHH 329 (770)
Q Consensus 255 ~~~~~g~-~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~~-~-Ir~id~-~G~-i~t~~g~~ 329 (770)
++. ...+.+.. .......|++.|++..+++-.. + |+..|. .+. +.++.+.
T Consensus 342 ----~~~~~~~~~~~~--------------------~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH- 396 (524)
T 2j04_B 342 ----DIATTKTTVSRF--------------------RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR- 396 (524)
T ss_dssp ----GHHHHCEEEEEC--------------------SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-
T ss_pred ----CCCccccccccc--------------------ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-
Confidence 111 00111100 0012357899998887666433 3 777763 332 2344432
Q ss_pred CCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe--CCEEEEEcC
Q psy4832 330 KHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID--DRVIFKLTN 379 (770)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D--~~~I~~i~~ 379 (770)
-.....|+++| ++.++++- .+.|+..+.
T Consensus 397 ---------------------~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 397 ---------------------ETTITAIGVSR-LHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp ---------------------SSCEEEEECCS-SCCBCEEEETTTEEECCBS
T ss_pred ---------------------CCceEEEEeCC-CCCeEEEEECCCEEEEEec
Confidence 12456899999 88765554 455655554
No 276
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=84.62 E-value=53 Score=36.30 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=40.6
Q ss_pred eeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEE
Q psy4832 430 LTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALS 507 (770)
Q Consensus 430 P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gia 507 (770)
...|+++|+|..+++-...+. |+..+. .+. +.++.|- .....+|+
T Consensus 358 v~~v~fsp~~~~l~s~~~d~t---v~lwd~~~~~~~~~l~gH------------------------------~~~V~sva 404 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASS---LRAVPSRAAFAVHPLVSR------------------------------ETTITAIG 404 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSE---EEEEETTCTTCCEEEEEC------------------------------SSCEEEEE
T ss_pred ccceEeCCCcCeEEEeCCCCc---EEEEECcccccceeeecC------------------------------CCceEEEE
Confidence 367899999988777655543 555553 232 1223221 12467889
Q ss_pred EcCCCcEEEEcCCCceEEeeec
Q psy4832 508 VSPDGVVNVADQGSLHILALQH 529 (770)
Q Consensus 508 v~~dG~lyvaD~~~~~I~~i~~ 529 (770)
++|+|.++++-...+.|+....
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBS
T ss_pred eCCCCCeEEEEECCCEEEEEec
Confidence 9999987776555566655443
No 277
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=83.99 E-value=37 Score=33.97 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=59.8
Q ss_pred CcceEEEeCCCCeEEEEe--CCEEEEEcCC-Cc-EEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccC
Q psy4832 353 WPTGLALSPLDDSLHFID--DRVIFKLTND-LK-VKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLG 428 (770)
Q Consensus 353 ~P~gla~d~~~g~lyv~D--~~~I~~i~~~-G~-v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 428 (770)
...+|+++| ++.+.++- .+.|+..+.. +. +..+.+.. .
T Consensus 15 ~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~-------------------------------------~ 56 (304)
T 2ynn_A 15 RVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTE-------------------------------------T 56 (304)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------------------------------------S
T ss_pred ceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccC-------------------------------------C
Confidence 457899999 78765554 5677777743 43 22332210 1
Q ss_pred CeeEEEEcCCCCEEEEeCCCCceeeEEEEcC-CCc-EEEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEE
Q psy4832 429 SLTALAFSPTGDLYIADIDARKVNALRVIDS-TGR-MFDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISAL 506 (770)
Q Consensus 429 ~P~giavd~~G~lyVaD~~~~ri~~i~~i~~-~G~-i~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~gi 506 (770)
....+++.++|+++++-...+. |+..+. +|+ +..+.+.. ....+|
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~---i~vwd~~~~~~~~~~~~h~------------------------------~~v~~~ 103 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFR---IRVFNYNTGEKVVDFEAHP------------------------------DYIRSI 103 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSE---EEEEETTTCCEEEEEECCS------------------------------SCEEEE
T ss_pred cEEEEEEeCCCCEEEEECCCCE---EEEEECCCCcEEEEEeCCC------------------------------CcEEEE
Confidence 2477889999987777666554 555553 343 33332211 235679
Q ss_pred EEcCCCcEEEEcCCCceEE
Q psy4832 507 SVSPDGVVNVADQGSLHIL 525 (770)
Q Consensus 507 av~~dG~lyvaD~~~~~I~ 525 (770)
+++|++.++++-...+.|+
T Consensus 104 ~~~~~~~~l~sgs~D~~v~ 122 (304)
T 2ynn_A 104 AVHPTKPYVLSGSDDLTVK 122 (304)
T ss_dssp EECSSSSEEEEEETTSCEE
T ss_pred EEcCCCCEEEEECCCCeEE
Confidence 9999988776644444443
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=83.93 E-value=60 Score=36.34 Aligned_cols=58 Identities=17% Similarity=0.167 Sum_probs=38.7
Q ss_pred CCCEEEEeC--ceEEEEcC--CCcEEEEeccCccccc--------ceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF--NLVRRLTP--EGNVFTVLQLSATQVS--------YQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~--~~I~~i~~--~G~v~~~~~~~~~~~~--------~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|.||++.. +.|..+|. +|++.-........-. ...+++++ ++.||+... +++++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD 131 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQA-NGHLLALD 131 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeC-CCEEEEEE
Confidence 788999887 57999996 7998866543221100 11356776 688888854 46788885
No 279
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=79.94 E-value=61 Score=33.87 Aligned_cols=66 Identities=11% Similarity=-0.008 Sum_probs=41.5
Q ss_pred ceEEEEcC--------CCCEEEEeC--ceEEEEcC--CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 182 PVALTSGP--------DGSLYVGDF--NLVRRLTP--EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 182 P~~la~~~--------dG~lyv~d~--~~I~~i~~--~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
-.+|++.| ||.++++-. +.||..+. .+.+....+. -.....++++|.+..++++-..++.|+.+
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~----~~~v~~v~~~p~~~~~l~~~~~d~~v~~w 214 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL----SSPGISVQFRPSNPNQLIVGERNGNIRIF 214 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC----SSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC----CCCcEEEEECCCCCceEEecCCCCEEEEE
Confidence 45677765 677777543 46666663 3445555432 23457899999655677776677788777
Q ss_pred ec
Q psy4832 250 LS 251 (770)
Q Consensus 250 ~~ 251 (770)
+.
T Consensus 215 d~ 216 (393)
T 4gq1_A 215 DW 216 (393)
T ss_dssp ET
T ss_pred EC
Confidence 54
No 280
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.37 E-value=61 Score=32.81 Aligned_cols=27 Identities=11% Similarity=-0.011 Sum_probs=19.0
Q ss_pred ceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 223 YQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 223 ~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
....++++| ++.++++-..++.|+.++
T Consensus 60 ~v~~v~~sp-~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 60 AIRSVAWRP-HTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 357899998 677776666666666664
No 281
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=78.35 E-value=71 Score=33.56 Aligned_cols=66 Identities=9% Similarity=0.139 Sum_probs=41.6
Q ss_pred ceEEEeCCCCeEEEEeCCEEEEEc-CCCcEEEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEE
Q psy4832 355 TGLALSPLDDSLHFIDDRVIFKLT-NDLKVKIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTAL 433 (770)
Q Consensus 355 ~gla~d~~~g~lyv~D~~~I~~i~-~~G~v~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~gi 433 (770)
+-|++++ ++.|-|+-.+.|+..+ .+|++..+.-...+ -....+|
T Consensus 109 ~~l~wS~-~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~----------------------------------~~~V~sv 153 (420)
T 4gga_A 109 NLVDWSS-GNVLAVALDNSVYLWSASSGDILQLLQMEQP----------------------------------GEYISSV 153 (420)
T ss_dssp BCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCST----------------------------------TCCEEEE
T ss_pred eeEEECC-CCEEEEEeCCEEEEEECCCCCEEEEEEecCC----------------------------------CCcEEEE
Confidence 4577776 6666676678888888 45765544311111 0235889
Q ss_pred EEcCCCCEEEEeCCCCceeeEEEEc
Q psy4832 434 AFSPTGDLYIADIDARKVNALRVID 458 (770)
Q Consensus 434 avd~~G~lyVaD~~~~ri~~i~~i~ 458 (770)
+++|+|.++++-...+. |+..+
T Consensus 154 ~fspdg~~lasgs~Dg~---v~iWd 175 (420)
T 4gga_A 154 AWIKEGNYLAVGTSSAE---VQLWD 175 (420)
T ss_dssp EECTTSSEEEEEETTSC---EEEEE
T ss_pred EECCCCCEEEEEECCCe---EEEEE
Confidence 99999997776665554 44444
No 282
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=77.49 E-value=1.1e+02 Score=35.11 Aligned_cols=53 Identities=8% Similarity=0.166 Sum_probs=33.1
Q ss_pred CCCEEEEeC-------ceEEEEcC-CCcEEEEeccCcccc--------------cce---------------eEEEEeCC
Q psy4832 190 DGSLYVGDF-------NLVRRLTP-EGNVFTVLQLSATQV--------------SYQ---------------YYLALSPA 232 (770)
Q Consensus 190 dG~lyv~d~-------~~I~~i~~-~G~v~~~~~~~~~~~--------------~~p---------------~~lav~p~ 232 (770)
++.|||+.. +.|+.+|. +|+....+....... .++ ..+++||.
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 578888753 57888885 688775543211110 000 35789988
Q ss_pred CCcEEEEeCC
Q psy4832 233 DGHLYISDAE 242 (770)
Q Consensus 233 ~g~lyvsd~~ 242 (770)
.+.||+...+
T Consensus 254 ~~~vy~~~~~ 263 (677)
T 1kb0_A 254 LNTMYVGTGN 263 (677)
T ss_dssp TTEEEEECCC
T ss_pred CCEEEEECCC
Confidence 8888887543
No 283
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=77.44 E-value=63 Score=32.49 Aligned_cols=56 Identities=7% Similarity=0.037 Sum_probs=38.3
Q ss_pred eEEEEEEccCCcEeEEEecCcEEEEEeCCCCCeEEEEcCCCCEEEEEEeCCCCceE
Q psy4832 694 KLISLVYDERGFLIFAQMFRHKYYIATDQCGTPVMVFNQYGETVREIMRSPYGHIV 749 (770)
Q Consensus 694 ~~~~~~yd~~G~l~~~~~~~~~~~~~~d~~G~~~~~~d~~G~~v~~~~yd~~G~~~ 749 (770)
....+.+.+.|+.++.-..+...++.-=..|.++.........|..+...|.|+.+
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 330 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 330 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCE
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeE
Confidence 47788888888777666555444433334566776666666667888888888866
No 284
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=76.05 E-value=1.3e+02 Score=35.57 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=19.5
Q ss_pred CcceEEEeCCCCeEEEEe--CCEEEEEcCCC
Q psy4832 353 WPTGLALSPLDDSLHFID--DRVIFKLTNDL 381 (770)
Q Consensus 353 ~P~gla~d~~~g~lyv~D--~~~I~~i~~~G 381 (770)
..+.|+++| ++.+.++- ++.|+.++..+
T Consensus 19 ~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~ 48 (902)
T 2oaj_A 19 KPIAAAFDF-TQNLLAIATVTGEVHIYGQQQ 48 (902)
T ss_dssp CEEEEEEET-TTTEEEEEETTSEEEEECSTT
T ss_pred CcEEEEECC-CCCEEEEEeCCCEEEEEeCCC
Confidence 467899999 88766554 46777776543
No 285
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=75.29 E-value=42 Score=36.02 Aligned_cols=116 Identities=7% Similarity=-0.051 Sum_probs=66.2
Q ss_pred CceEEEEcCCCCEEE----EeC--ceEEEEcCCC---------cEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcE
Q psy4832 181 TPVALTSGPDGSLYV----GDF--NLVRRLTPEG---------NVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQ 245 (770)
Q Consensus 181 ~P~~la~~~dG~lyv----~d~--~~I~~i~~~G---------~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~ 245 (770)
.+.++++.++|..++ +-. +.|+.++... +....+......-.....|+++|.++.++++-..++.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 468899999998666 322 3666665321 1100111101123456899999966888887777777
Q ss_pred EEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEeCCC-eEEECCCCcEE
Q psy4832 246 ILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIADGTN-IRVVSPEGIIH 323 (770)
Q Consensus 246 I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD~~~-Ir~id~~G~i~ 323 (770)
|+.++.. ++.. ...-.+ .-.....++++++|. |+++...+ |+.+|..+...
T Consensus 174 v~iwD~~------~~~~-~~~~~~--------------------~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~ 226 (434)
T 2oit_A 174 IAVLQVT------ETVK-VCATLP--------------------STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEK 226 (434)
T ss_dssp EEEEEES------SSEE-EEEEEC--------------------GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEE
T ss_pred EEEEEcC------CCcc-eeeccC--------------------CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCccc
Confidence 7776431 1211 111000 012467899999887 45555444 88888876543
No 286
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=73.91 E-value=1.3e+02 Score=34.29 Aligned_cols=57 Identities=11% Similarity=-0.030 Sum_probs=32.0
Q ss_pred ceEEEEcCCCCEEE--EeC-----ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeC
Q psy4832 182 PVALTSGPDGSLYV--GDF-----NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDA 241 (770)
Q Consensus 182 P~~la~~~dG~lyv--~d~-----~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~ 241 (770)
-.++++.|||.... .+. ..|+.++.+ |+..+... ..... ..+++++|.+..|+++..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~~~-~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV--IEGGK-YATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC--BSCCT-TCCCEECTTSSEEEEEEC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc--cCccc-ccceEEecCCCEEEEEEe
Confidence 46788999998443 332 368888865 43320000 01111 167899985556766654
No 287
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.23 E-value=64 Score=33.07 Aligned_cols=67 Identities=9% Similarity=-0.048 Sum_probs=36.6
Q ss_pred ceEEEEcC-CCC-EEEEeC-------ceEEEEcCCCcE-EEEeccCcccccceeEEEEeCCCCcEEEEeC--CC--cEEE
Q psy4832 182 PVALTSGP-DGS-LYVGDF-------NLVRRLTPEGNV-FTVLQLSATQVSYQYYLALSPADGHLYISDA--EK--HQIL 247 (770)
Q Consensus 182 P~~la~~~-dG~-lyv~d~-------~~I~~i~~~G~v-~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~--~~--~~I~ 247 (770)
...+++.| +|. |++... .+|..++.++.. ..+.. ......+..++++|.+..|+++.. +. ..|+
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 45667778 665 444322 368888876543 33321 111234677899985455665532 22 3377
Q ss_pred EEe
Q psy4832 248 RVL 250 (770)
Q Consensus 248 ~i~ 250 (770)
.++
T Consensus 268 ~~d 270 (396)
T 3c5m_A 268 KAN 270 (396)
T ss_dssp EEC
T ss_pred EEE
Confidence 774
No 288
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=68.14 E-value=45 Score=35.73 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=21.5
Q ss_pred CeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcE
Q psy4832 429 SLTALAFSPTGDLYIADIDARKVNALRVIDSTGRM 463 (770)
Q Consensus 429 ~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i 463 (770)
.+.+++++|+|..+++-...+. |+..+..+..
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~---v~iwd~~~~~ 225 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGT---VVQYLPTLQE 225 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSC---EEEECTTCCE
T ss_pred ceeEEEEcCCCCEEEEEcCCCc---EEEEccCCcc
Confidence 4789999999985554444443 6777776553
No 289
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=65.17 E-value=1.2e+02 Score=30.38 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=36.8
Q ss_pred ceEEEEcC--CCCEEEE-eC-ceEEEEcCC-Cc--EEEEeccCcccccceeEEEEeCCC-CcEEEEeCCCcEEEEEe
Q psy4832 182 PVALTSGP--DGSLYVG-DF-NLVRRLTPE-GN--VFTVLQLSATQVSYQYYLALSPAD-GHLYISDAEKHQILRVL 250 (770)
Q Consensus 182 P~~la~~~--dG~lyv~-d~-~~I~~i~~~-G~--v~~~~~~~~~~~~~p~~lav~p~~-g~lyvsd~~~~~I~~i~ 250 (770)
-.++++.+ +|+++++ .. +.|+.++.. ++ ....+. ..-.....++++|.. +.++++-..++.|+.++
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~---~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd 133 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA---GHDSSVNSVCWAPHDYGLILACGSSDGAISLLT 133 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC---CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc---CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence 35677754 3665543 33 467777754 32 222221 122345789999842 66777766666666654
No 290
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=64.98 E-value=1.9e+02 Score=32.83 Aligned_cols=58 Identities=16% Similarity=0.227 Sum_probs=37.9
Q ss_pred CCCEEEEeC-ceEEEEcC-CCcEEEEeccCcccc--------cceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF-NLVRRLTP-EGNVFTVLQLSATQV--------SYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~--------~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|.||++.. +.|..+|. +|+..-......... ....+++++ ++.||+... +++|+.++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD 133 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTL-DGRLIALD 133 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECT-TSEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEcC-CCEEEEEE
Confidence 788999876 58999984 798886654321110 012456665 678888754 46788885
No 291
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=64.00 E-value=1.8e+02 Score=32.31 Aligned_cols=138 Identities=14% Similarity=0.203 Sum_probs=71.1
Q ss_pred EEEcCCCCEEEEeCceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEe--------------CCCcEEEEEe
Q psy4832 185 LTSGPDGSLYVGDFNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISD--------------AEKHQILRVL 250 (770)
Q Consensus 185 la~~~dG~lyv~d~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd--------------~~~~~I~~i~ 250 (770)
..-.++|.+.+.+..++..+|.+|++...+..+......-..+...| +|++++.- .-...|+.|
T Consensus 212 ~~g~~nG~l~~g~G~~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~-nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EV- 289 (571)
T 3elq_A 212 IRETPRGTFTAVQGQHWYEFDMMGQVLEDHKLPRGFADATHESIETP-NGTVLLRVGKSNYRRDDGVHVTTIRDHILEV- 289 (571)
T ss_dssp EEECTTSCEEEEEBTEEEEECTTCCEEEEEECCTTEECBCSCEEECT-TSCEEEEEEETTEECTTSCEECCCSCEEEEE-
T ss_pred EEecCCCCEEEecCcEEEEECCCCcEEEEEECCCCccccccceEEcC-CCcEEEEEecccccCCCCcccceeccEEEEE-
Confidence 33356888888887789999999998765543221112224455565 56555421 112355666
Q ss_pred ccCCccCCCCcEEEEEC-----------------CCccccCCCCCCcCCCc-----------cc--ccccccCcceEEEc
Q psy4832 251 SLESVADPSINWEVAVG-----------------SGERCIPGDETNCGDNG-----------PA--LAAKLSHPKGLAIK 300 (770)
Q Consensus 251 ~~~~~~~~~g~~~~vaG-----------------~g~~~~p~~~~~~g~~g-----------~~--~~a~l~~P~gIavd 300 (770)
|.+|++...-- .+..|++-.....|... +. ......+-++|..+
T Consensus 290 ------D~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d 363 (571)
T 3elq_A 290 ------DKSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYD 363 (571)
T ss_dssp ------CTTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEE
T ss_pred ------CCCCCEEEEEEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEc
Confidence 34454332211 11122211111111100 00 01123345778888
Q ss_pred cCC-cEEEEeCCC-eEEECCCCcEEEeecCCC
Q psy4832 301 ADK-TMFIADGTN-IRVVSPEGIIHTLIGHHK 330 (770)
Q Consensus 301 ~~G-~lYvaD~~~-Ir~id~~G~i~t~~g~~~ 330 (770)
+.+ ++.|+-... |.+|+.+|+|.-.+|...
T Consensus 364 ~~dd~~liSsR~~~I~~Id~tG~V~W~LGg~~ 395 (571)
T 3elq_A 364 AKDDSIILSSRHQGVVKIGRDKQVKWILAPSK 395 (571)
T ss_dssp TTTTEEEEEETTTEEEEEETTSCEEEEESCST
T ss_pred CCCCEEEEECCccEEEEEcCCCcEEEEECCCC
Confidence 744 566655433 889999999988887653
No 292
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.82 E-value=1.4e+02 Score=30.99 Aligned_cols=179 Identities=17% Similarity=0.237 Sum_probs=88.0
Q ss_pred CceEEEEcC--CCCEEEEeC-c----eEEEEcCCCcEEEEeccCc----c-------cccceeEEEEeCC--CCcEEEEe
Q psy4832 181 TPVALTSGP--DGSLYVGDF-N----LVRRLTPEGNVFTVLQLSA----T-------QVSYQYYLALSPA--DGHLYISD 240 (770)
Q Consensus 181 ~P~~la~~~--dG~lyv~d~-~----~I~~i~~~G~v~~~~~~~~----~-------~~~~p~~lav~p~--~g~lyvsd 240 (770)
...+|++|| .+.||++-. + .|.+.+..|+.-+.+.... . .+..-..|+++|. .+.||+..
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~ 135 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT 135 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe
Confidence 357899999 789999754 3 6888766665323222110 0 1123446888874 57888865
Q ss_pred CCCcEEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcC---CCcccccccccCcceEEEcc--CCcEEEEeCCC-eE
Q psy4832 241 AEKHQILRVLSLESVADPSINWEVAVGSGERCIPGDETNCG---DNGPALAAKLSHPKGLAIKA--DKTMFIADGTN-IR 314 (770)
Q Consensus 241 ~~~~~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g---~~g~~~~a~l~~P~gIavd~--~G~lYvaD~~~-Ir 314 (770)
. .+.|++.. |.-.+.+.+...... |......+ +++. ....-..|++|+ .+.||++.... |.
T Consensus 136 ~-~ggl~~S~------DgG~tW~~~~~~~~~--p~~~~~~~~~~~g~~----~~~~i~~i~~d~~~~~~l~vg~~~ggl~ 202 (394)
T 3b7f_A 136 S-PQGLFRST------DHGASWEPVAGFNDH--PMRRAWTGGEQDGTP----DGPKMHSILVDPRDPKHLYIGMSSGGVF 202 (394)
T ss_dssp E-TTEEEEES------STTSBCEECHHHHTC--TTHHHHHCCC----C----CCCEEEEEEECTTCTTCEEEEEETBEEE
T ss_pred c-CCcEEEEc------CCCCCeEECcCccCC--ccccccccccccCCC----CCCceeEEEECCCCCCEEEEEECCCCEE
Confidence 3 35677763 211233333210000 00000000 0000 001234788886 35799986444 66
Q ss_pred EECCCC-cEEEeecCCCCCCCcCCCccCCCcccccccc-cCcceEEEeCCC-CeEEEEeCCEEEEEcCCCc
Q psy4832 315 VVSPEG-IIHTLIGHHKHHNIWSPFNCHRSFPASTAQL-QWPTGLALSPLD-DSLHFIDDRVIFKLTNDLK 382 (770)
Q Consensus 315 ~id~~G-~i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l-~~P~gla~d~~~-g~lyv~D~~~I~~i~~~G~ 382 (770)
+.+-.| ....+. .+... .+.|. ....+ .....|++++.+ +.||+.....|++.+..|.
T Consensus 203 ~s~DgG~tW~~~~-~~~~~-~~~p~--------~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~ 263 (394)
T 3b7f_A 203 ESTDAGTDWKPLN-RGCAA-NFLPD--------PNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREG 263 (394)
T ss_dssp EESSTTSSCEECC-TTCCC-TTSSS--------SSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTT
T ss_pred EECCCCCCceECC-CCccc-cccCC--------CccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCC
Confidence 665444 232221 11000 00010 00001 235679999832 7899988777888765554
No 293
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=62.50 E-value=2.2e+02 Score=32.62 Aligned_cols=255 Identities=15% Similarity=0.087 Sum_probs=0.0
Q ss_pred eEEEEcCCCCEEEEeCce-------EEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCc-----------
Q psy4832 183 VALTSGPDGSLYVGDFNL-------VRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKH----------- 244 (770)
Q Consensus 183 ~~la~~~dG~lyv~d~~~-------I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~----------- 244 (770)
.++++.|||.....-..+ |+.++.++...... ...-..-.+++++|. ..||++.....
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~---~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD---ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE---EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc---cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Q ss_pred --EEEEEeccCCccCCCCcEEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCc-EEEEe-----CCC-eEE
Q psy4832 245 --QILRVLSLESVADPSINWEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKT-MFIAD-----GTN-IRV 315 (770)
Q Consensus 245 --~I~~i~~~~~~~~~~g~~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~-lYvaD-----~~~-Ir~ 315 (770)
+|++.+.. .....-..+...... -..-.+++++++|. |+++- ..+ |+.
T Consensus 242 ~~~v~~~~lg----t~~~~~~lv~~~~~~-------------------~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~ 298 (741)
T 1yr2_A 242 NQTVWLHRLG----TPQSADQPVFATPEL-------------------PKRGHGASVSSDGRWVVITSSEGTDPVNTVHV 298 (741)
T ss_dssp CCEEEEEETT----SCGGGCEEEECCTTC-------------------TTCEEEEEECTTSCEEEEEEECTTCSCCEEEE
T ss_pred CCEEEEEECC----CCchhCEEEeccCCC-------------------CeEEEEEEECCCCCEEEEEEEccCCCcceEEE
Q ss_pred ECCCCc----EEEeecCCCCCCCcCCCccCCCcccccccccCcceEEEeCCCCeEEEEe-----CCEEEEEcCCC---cE
Q psy4832 316 VSPEGI----IHTLIGHHKHHNIWSPFNCHRSFPASTAQLQWPTGLALSPLDDSLHFID-----DRVIFKLTNDL---KV 383 (770)
Q Consensus 316 id~~G~----i~t~~g~~~~~~~~~p~~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-----~~~I~~i~~~G---~v 383 (770)
++.++. +..+.... ...--.+++.++.||+.. +.+|++++.++ ..
T Consensus 299 ~d~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 355 (741)
T 1yr2_A 299 ARVTNGKIGPVTALIPDL-----------------------KAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF 355 (741)
T ss_dssp EEEETTEECCCEEEECSS-----------------------SSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEE
T ss_pred EECCCCCCcccEEecCCC-----------------------CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCcccc
Q ss_pred EEEecCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeEEEEcCCCCEEEEeCCCCceeeEEEEcCCCcE
Q psy4832 384 KIVAGIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTALAFSPTGDLYIADIDARKVNALRVIDSTGRM 463 (770)
Q Consensus 384 ~~vaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~giavd~~G~lyVaD~~~~ri~~i~~i~~~G~i 463 (770)
+.+....... ..+++++ ++.|+++...+.. .+|..++.+|..
T Consensus 356 ~~l~~~~~~~------------------------------------l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~g~~ 397 (741)
T 1yr2_A 356 DTVVPESKDN------------------------------------LESVGIA-GNRLFASYIHDAK-SQVLAFDLDGKP 397 (741)
T ss_dssp EEEECCCSSE------------------------------------EEEEEEE-BTEEEEEEEETTE-EEEEEEETTSCE
T ss_pred EEEecCCCCe------------------------------------EEEEEEE-CCEEEEEEEECCE-EEEEEEeCCCCc
Q ss_pred EEeecCccCCCCCcCCCCCcccccCccCcccccceecCCeeEEEEcCCC--------------cEEEEcCCCceEEeeec
Q psy4832 464 FDFAGRWQSDKKNCNTTNCAEFEKNSKETLLTSTARFTSISALSVSPDG--------------VVNVADQGSLHILALQH 529 (770)
Q Consensus 464 ~~~aG~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~P~giav~~dG--------------~lyvaD~~~~~I~~i~~ 529 (770)
......+..+. ..+++++|+| .+|..|..++....+..
T Consensus 398 ~~~l~~~~~~~----------------------------v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 398 AGAVSLPGIGS----------------------------ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp EEECBCSSSCE----------------------------EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred eeeccCCCCeE----------------------------EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Q ss_pred CCcccCCCC----cEEEeCCCCCcEEEE
Q psy4832 530 YLPTHDEHG----EFKIPYPATNEIYVF 553 (770)
Q Consensus 530 ~~~~~~~~g----~~~i~~~~~~e~yvf 553 (770)
.....+... ...+.+.++.++..+
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~dg~~i~~~ 477 (741)
T 1yr2_A 450 VHLTFDPADFRVEQVFYPSKDGTKVPMF 477 (741)
T ss_dssp CCCSSCGGGEEEEEEEEECTTSCEEEEE
T ss_pred CCCCCChhHCEEEEEEEEcCCCCEEEEE
No 294
>4ghb_A Hypothetical protein; A porin like fold, uncharacterized protein of PF06788 family structural genomics; 2.32A {Bacteroides uniformis}
Probab=62.48 E-value=1.3e+02 Score=29.89 Aligned_cols=105 Identities=13% Similarity=0.109 Sum_probs=68.2
Q ss_pred eeeeeec-CceEEEEEecCC-----c------eEEEEEeCCCCEEEEEcCCCCEEEEEecCCCCCeeEEEEEeCCCCeEE
Q psy4832 629 RVIFKLT-NDLKIRALKKGR-----F------DVTYDYDHLDRLSVRKDNYGNITQFFYNNHEYPTQVTHIYSPRYGKLI 696 (770)
Q Consensus 629 ~~~~~~~-~g~l~~~~~~~g-----~------~~~y~YD~~grlv~~~d~~G~~~~~~y~~~~~~~~~~~~~~p~~g~~~ 696 (770)
..+|.|+ +|+|+..+...+ . .++=.|+ .++|..+|..|+++.|.-+.++..+.-++.......+..
T Consensus 41 t~ty~y~~~grLt~~t~~q~~~~~~e~~~~e~~t~v~y~--~n~vtvtDe~g~~~~Y~LN~~Gyv~~C~~~e~~~~~rty 118 (272)
T 4ghb_A 41 THTYLYNSAGRLTGYTGKQSFTAGDELFEIENTTTVEYK--DHQAVITDEAGTVSTYTLNDKGYATTCTSQDMAGNTRTY 118 (272)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEETTEEEEEEEEEEEEEE--TTEEEEECTTCCEEEEEECTTSCEEEEEEECTTSCEEEE
T ss_pred EEEEEecCCCcEEEEEeeeeeecccceEEeeeeeEEEec--CCEEEEEcCCCcEEEEEEcCCCcEEEeEEEecCCCccce
Confidence 4557775 799987775322 1 2234555 445678999999999998888877666666555467888
Q ss_pred EEEEcc----CCcEeEEEec--C-cEEEEE--eCCCCCeEEEEcCCCC
Q psy4832 697 SLVYDE----RGFLIFAQMF--R-HKYYIA--TDQCGTPVMVFNQYGE 735 (770)
Q Consensus 697 ~~~yd~----~G~l~~~~~~--~-~~~~~~--~d~~G~~~~~~d~~G~ 735 (770)
.|.|.. .|+|+.++.. + ..+... .=..|..+.++.....
T Consensus 119 ~FTY~~~~~~~g~LtnI~e~~~d~~~yssi~i~Y~~g~~~~it~k~d~ 166 (272)
T 4ghb_A 119 TFSYLINTEDKYYLENITEKLDDGKEYSFITIDYSNFRALRIQQKVDT 166 (272)
T ss_dssp EEEEEECTTSCEEEEEEEEECTTSCEEEEEEEECSSTTEEEEEEEETT
T ss_pred eeEEeccCCCCcceEEEEEecCCceEEEEEEEeccCCceEEEEecCCc
Confidence 899964 4899999833 3 333332 2345666666654433
No 295
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=61.54 E-value=1.4e+02 Score=30.07 Aligned_cols=27 Identities=11% Similarity=-0.050 Sum_probs=19.4
Q ss_pred eeEEEEcCCCCEEEEeCCCCceeeEEEEcC
Q psy4832 430 LTALAFSPTGDLYIADIDARKVNALRVIDS 459 (770)
Q Consensus 430 P~giavd~~G~lyVaD~~~~ri~~i~~i~~ 459 (770)
...++++|+|.++++-...+. |+..|.
T Consensus 173 i~~~~~~pdg~~lasg~~dg~---i~iwd~ 199 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGI---LDVYNL 199 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSC---EEEEES
T ss_pred eEEEEECCCCCEEEEEcCCCE---EEEEEC
Confidence 578999999998887655554 555553
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=61.11 E-value=2.1e+02 Score=31.94 Aligned_cols=58 Identities=12% Similarity=0.148 Sum_probs=38.4
Q ss_pred CCCEEEEeC-ceEEEEcC-CCcEEEEeccCccccc------ceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF-NLVRRLTP-EGNVFTVLQLSATQVS------YQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~~------~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|.|||+.. +.|..+|. +|+..-.+........ ...++++. ++.||+... +++|+.++
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--~~~v~~~t~-dg~l~AlD 133 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTL-DASVVALN 133 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEET-TTEEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--CCEEEEEeC-CCEEEEEE
Confidence 788999987 67999986 6988765543221111 12456665 688888765 46788885
No 297
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=60.58 E-value=18 Score=32.27 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=33.9
Q ss_pred eEEEEeecCCCCCCCccEEEEEEE-EceeEE-EEEeeCCCCceEEEEEecccccCceee
Q psy4832 23 SSILIHLTHNEIPASLVKVHVRVE-IEGSVH-TKTYEADPNLTHVFTWNKRNVYKQKVY 79 (770)
Q Consensus 23 ~~~~~~~~~~~~p~~l~~v~~~~~-v~g~~~-~~~~~~~p~~~~~~~W~~~d~y~~~v~ 79 (770)
..+.+.| |..-..|.|.|. -.|++- +..+.+.+.-.+.|.||++|.-|+++-
T Consensus 26 ~~~~~~l-----~~~a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~ 79 (138)
T 3osv_A 26 FKASLNL-----PVSSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMP 79 (138)
T ss_dssp EEEEEEE-----SBCEEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCC
T ss_pred EEEEEEC-----CCCCcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCC
Confidence 3455555 444445655553 267663 334566677789999999999988753
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=55.89 E-value=1.8e+02 Score=29.48 Aligned_cols=64 Identities=6% Similarity=-0.075 Sum_probs=33.8
Q ss_pred ceEEEEcCCCCEEEEeC-ceEEEEcCCCc-EEEEeccCc-ccccceeEEEEeCCCCcEEEEeCCCcEEEEE
Q psy4832 182 PVALTSGPDGSLYVGDF-NLVRRLTPEGN-VFTVLQLSA-TQVSYQYYLALSPADGHLYISDAEKHQILRV 249 (770)
Q Consensus 182 P~~la~~~dG~lyv~d~-~~I~~i~~~G~-v~~~~~~~~-~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i 249 (770)
..+|++.+++.+|++-. +.|.+-.-.|+ ...+. ... ..-..-..|++++ +.+|++-. ...|++-
T Consensus 38 ~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~-~~~~~~~~~~~~i~~~~--~~~~~~g~-~g~i~~S 104 (327)
T 2xbg_A 38 ILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRT-LVLDHSDYRFNSVSFQG--NEGWIVGE-PPIMLHT 104 (327)
T ss_dssp EEEEEESSSSCEEEEETTTEEEEESSTTSSCEECC-CCCSCCCCEEEEEEEET--TEEEEEEE-TTEEEEE
T ss_pred EEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECC-CCCCCCCccEEEEEecC--CeEEEEEC-CCeEEEE
Confidence 45677766777777544 45666543343 22221 111 1112346788874 67777643 3466664
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=55.44 E-value=1.8e+02 Score=29.42 Aligned_cols=146 Identities=12% Similarity=0.106 Sum_probs=73.7
Q ss_pred eEEEEcCCCCEEEEe-CceEEEEcCCCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEeccCCccCCCCc
Q psy4832 183 VALTSGPDGSLYVGD-FNLVRRLTPEGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVLSLESVADPSIN 261 (770)
Q Consensus 183 ~~la~~~dG~lyv~d-~~~I~~i~~~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~~~~~~~~~~g~ 261 (770)
.+|++++ +.+|++- ...|.+-.-.|+.=+.+.........++.|++.+ ++.+|++.. .+.|++-. |.-.+
T Consensus 83 ~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~------DgG~t 153 (327)
T 2xbg_A 83 NSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMITN-VGAIYRTK------DSGKN 153 (327)
T ss_dssp EEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEET-TCCEEEES------STTSS
T ss_pred EEEEecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEc------CCCCC
Confidence 5677775 6777653 4567775433543222221111112357787764 678887764 34566652 22223
Q ss_pred EEEEECCCccccCCCCCCcCCCcccccccccCcceEEEccCCcEEEEeC-CCeEEECCC-Cc-EEEeecCCCCCCCcCCC
Q psy4832 262 WEVAVGSGERCIPGDETNCGDNGPALAAKLSHPKGLAIKADKTMFIADG-TNIRVVSPE-GI-IHTLIGHHKHHNIWSPF 338 (770)
Q Consensus 262 ~~~vaG~g~~~~p~~~~~~g~~g~~~~a~l~~P~gIavd~~G~lYvaD~-~~Ir~id~~-G~-i~t~~g~~~~~~~~~p~ 338 (770)
.+.+.. +. -....+|++++++.+|++.. +.|++-+-. |. ...+ ....
T Consensus 154 W~~~~~-~~--------------------~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~-------- 203 (327)
T 2xbg_A 154 WQALVQ-EA--------------------IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTT-------- 203 (327)
T ss_dssp EEEEEC-SC--------------------CCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCS--------
T ss_pred CEEeec-CC--------------------CcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCC--------
Confidence 544432 00 00234678887787776543 335543222 31 1111 1100
Q ss_pred ccCCCcccccccccCcceEEEeCCCCeEEEEe-CCEEEEEcCC
Q psy4832 339 NCHRSFPASTAQLQWPTGLALSPLDDSLHFID-DRVIFKLTND 380 (770)
Q Consensus 339 ~~~~~~~~~~~~l~~P~gla~d~~~g~lyv~D-~~~I~~i~~~ 380 (770)
-.....|++++ ++.+|++. .+.+++-+.|
T Consensus 204 ------------~~~~~~~~~~~-~g~~~~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 204 ------------SRRLHNMGFTP-DGRLWMIVNGGKIAFSDPD 233 (327)
T ss_dssp ------------SSCEEEEEECT-TSCEEEEETTTEEEEEETT
T ss_pred ------------CCccceeEECC-CCCEEEEeCCceEEEecCC
Confidence 01245788888 88888876 4566554344
No 300
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=49.62 E-value=3.1e+02 Score=30.40 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=16.5
Q ss_pred cCCcEEEEeCCC-eEEECC-CCcEEE
Q psy4832 301 ADKTMFIADGTN-IRVVSP-EGIIHT 324 (770)
Q Consensus 301 ~~G~lYvaD~~~-Ir~id~-~G~i~t 324 (770)
.++.||+..... |+.+|. +|++.-
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 467788876544 888884 576654
No 301
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=48.03 E-value=2.5e+02 Score=28.93 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=15.5
Q ss_pred eeEEEEcCCCC-EEEEeCCCCceeeEEEEc
Q psy4832 430 LTALAFSPTGD-LYIADIDARKVNALRVID 458 (770)
Q Consensus 430 P~giavd~~G~-lyVaD~~~~ri~~i~~i~ 458 (770)
...+++.|++. ++++-...+. |+..|
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~~---v~~wd 215 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNGN---IRIFD 215 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTSE---EEEEE
T ss_pred cEEEEECCCCCceEEecCCCCE---EEEEE
Confidence 57899998764 4444444443 55555
No 302
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=46.68 E-value=3.7e+02 Score=30.52 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=36.1
Q ss_pred EEEEcC-CCCEEEEeCc--------------------eEEEEcC-CCcEEEEeccCccc-----cccee-----------
Q psy4832 184 ALTSGP-DGSLYVGDFN--------------------LVRRLTP-EGNVFTVLQLSATQ-----VSYQY----------- 225 (770)
Q Consensus 184 ~la~~~-dG~lyv~d~~--------------------~I~~i~~-~G~v~~~~~~~~~~-----~~~p~----------- 225 (770)
.+++|+ .+.||+...+ .|.-+|+ +|++.-.+...... ...|.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 467887 4667776543 3888886 48887655421110 11110
Q ss_pred --EEEEeCCCCcEEEEeCCCcEEE
Q psy4832 226 --YLALSPADGHLYISDAEKHQIL 247 (770)
Q Consensus 226 --~lav~p~~g~lyvsd~~~~~I~ 247 (770)
.+.+...+|.||+-|..++++.
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEe
Confidence 2333335677888777766643
No 303
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=44.78 E-value=2.9e+02 Score=28.80 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=24.6
Q ss_pred CCCCcEEEEecC-CceEEEEcCCCCCcEEEEEecCCCCCCceEEEECCCCCEEEE
Q psy4832 545 PATNEIYVFNRY-GQHITTRDMTSGKPRYSFLYSKNTSFGKLSTITDASGNKINF 598 (770)
Q Consensus 545 ~~~~e~yvfd~~-G~~~~t~d~~tg~~~y~~~Yd~~~~~G~L~~vtd~~G~~~~~ 598 (770)
..++.++++|.. ++.+.+.... ....+...+..+ |++......+|....+
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~---~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSGH-TDRIYSTIYDHE---RKRCISASMDTTIRIW 337 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEETT---TTEEEEEETTSCEEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCC-CCCEEEEEEcCC---CCEEEEEeCCCcEEEE
Confidence 344566666643 3334433322 233455556655 6655555555554333
No 304
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=43.38 E-value=3.9e+02 Score=29.90 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=40.1
Q ss_pred CceEEEEcC-CCCEEEEeC-------------ceEEEEcCC-CcEEEEeccCcccccceeEEEEeCCCCcEEEEeCC-Cc
Q psy4832 181 TPVALTSGP-DGSLYVGDF-------------NLVRRLTPE-GNVFTVLQLSATQVSYQYYLALSPADGHLYISDAE-KH 244 (770)
Q Consensus 181 ~P~~la~~~-dG~lyv~d~-------------~~I~~i~~~-G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~-~~ 244 (770)
.+...++.+ +|.|||.-. +.+.++++. ++...+...+...-.+-.++++.. +|.||+.--. ..
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAK 265 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTT
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCC
Confidence 356778877 899999631 257778865 443332211111112233567764 8999998652 34
Q ss_pred EEEEEe
Q psy4832 245 QILRVL 250 (770)
Q Consensus 245 ~I~~i~ 250 (770)
.+++++
T Consensus 266 ~v~~yd 271 (656)
T 1k3i_A 266 KTSLYD 271 (656)
T ss_dssp CEEEEE
T ss_pred ceEEec
Confidence 677774
No 305
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=42.42 E-value=3.1e+02 Score=28.35 Aligned_cols=22 Identities=32% Similarity=0.329 Sum_probs=17.2
Q ss_pred CeeEEEEcC-CCCEEEEeCCCCc
Q psy4832 429 SLTALAFSP-TGDLYIADIDARK 450 (770)
Q Consensus 429 ~P~giavd~-~G~lyVaD~~~~r 450 (770)
....|+++| +|.++++-...+.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~ 87 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGV 87 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSE
T ss_pred ceEEEEECCCCCCEEEEecCCce
Confidence 468999999 9988777766554
No 306
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=40.40 E-value=3.4e+02 Score=28.23 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=28.3
Q ss_pred CCCEEEE-eC-ceEEEEcC-CCcEEEEeccCcccccceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVG-DF-NLVRRLTP-EGNVFTVLQLSATQVSYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~-d~-~~I~~i~~-~G~v~~~~~~~~~~~~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|+++++ .. +.|+.++. +|+....+. ..-.....++++ +.++++-..++.|..++
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLV---GHTGGVWSSQMR---DNIIISGSTDRTLKVWN 185 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECC---CCSSCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEc---CCCCCEEEEEec---CCEEEEEeCCCeEEEEE
Confidence 4554443 33 46666664 465554442 122234567776 34555555556776664
No 307
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=39.63 E-value=66 Score=28.44 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=30.3
Q ss_pred CccEEEEEEE-EceeEEEE-EeeCCCCceEEEEEecccccCceee
Q psy4832 37 SLVKVHVRVE-IEGSVHTK-TYEADPNLTHVFTWNKRNVYKQKVY 79 (770)
Q Consensus 37 ~l~~v~~~~~-v~g~~~~~-~~~~~p~~~~~~~W~~~d~y~~~v~ 79 (770)
.-..|.|.|. -.|++-.+ .+.+.+.-.+.|.||++|.-|.++-
T Consensus 37 ~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~ 81 (138)
T 3c12_A 37 SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMA 81 (138)
T ss_dssp SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCC
T ss_pred CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCC
Confidence 3356777775 57775433 3456666689999999999888753
No 308
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=37.21 E-value=5.1e+02 Score=29.38 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=21.5
Q ss_pred ceEEEccCCcEEEEeCCCeEEECCC-CcEEEee
Q psy4832 295 KGLAIKADKTMFIADGTNIRVVSPE-GIIHTLI 326 (770)
Q Consensus 295 ~gIavd~~G~lYvaD~~~Ir~id~~-G~i~t~~ 326 (770)
..+++.++|.+++++.+.|+..+.. |....++
T Consensus 20 ~~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~ 52 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQENNILVFNAEYGNSSVFL 52 (740)
T ss_dssp CCEEECSSSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred cccEECCCCcEEEEcCCcEEEEECCCCceEEEE
Confidence 3678888998777764448888754 5544444
No 309
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=35.45 E-value=3.9e+02 Score=27.51 Aligned_cols=61 Identities=10% Similarity=-0.005 Sum_probs=34.7
Q ss_pred EcCCCCEEEEeCceEEEEcCC--C-cEEEEeccCcccccceeEEEEeCC-CCcEEEEeCCCc---EEEEE
Q psy4832 187 SGPDGSLYVGDFNLVRRLTPE--G-NVFTVLQLSATQVSYQYYLALSPA-DGHLYISDAEKH---QILRV 249 (770)
Q Consensus 187 ~~~dG~lyv~d~~~I~~i~~~--G-~v~~~~~~~~~~~~~p~~lav~p~-~g~lyvsd~~~~---~I~~i 249 (770)
.|.+|.||++-..-+.+++.+ | +...+-. ...-.....|+++|. .+.||++-...+ .|++.
T Consensus 19 ~d~~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~--~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s 86 (394)
T 3b7f_A 19 ESGPVMLLVATIKGAWFLASDPARRTWELRGP--VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS 86 (394)
T ss_dssp CCSCCEEEEEETTEEEEEEECTTSCSEEEEEE--ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE
T ss_pred CCCCCEEEEEecCceEEEECCCCCCCceECCc--cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe
Confidence 455788999876545555433 2 3443211 011234678999973 577998754321 67776
No 310
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=33.87 E-value=5.6e+02 Score=28.94 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=37.4
Q ss_pred CCCEEEEeC-ceEEEEcC-CCcEEEEeccCcccc--------cceeEEEEeCCCCcEEEEeCCCcEEEEEe
Q psy4832 190 DGSLYVGDF-NLVRRLTP-EGNVFTVLQLSATQV--------SYQYYLALSPADGHLYISDAEKHQILRVL 250 (770)
Q Consensus 190 dG~lyv~d~-~~I~~i~~-~G~v~~~~~~~~~~~--------~~p~~lav~p~~g~lyvsd~~~~~I~~i~ 250 (770)
+|.||++.. +.|.-+|. +|+..-.+....... ....+++++ ++.||+... +++|+.++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~v~v~~~-dg~l~AlD 137 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--KGKVYVGVL-DGRLEAID 137 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--CCEEEEEcc-CCEEEEEE
Confidence 788999876 58889985 698876654321110 011345665 688888764 46788885
No 311
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.14 E-value=3.8e+02 Score=25.77 Aligned_cols=65 Identities=9% Similarity=0.111 Sum_probs=41.1
Q ss_pred ceEEEeCCCCeEEEEeCCEEEEEc-CCCcEEEEe-cCCCCCCCCCCCCccccccccccccccccCCcccccccccCCeeE
Q psy4832 355 TGLALSPLDDSLHFIDDRVIFKLT-NDLKVKIVA-GIPLHCRTGDKDKRDFKDKQSKTKKSTVQDDSVRASNMDLGSLTA 432 (770)
Q Consensus 355 ~gla~d~~~g~lyv~D~~~I~~i~-~~G~v~~va-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~P~g 432 (770)
+-|++++ ++.|-++-.+.|+..+ .+|+..... +.. + -.....
T Consensus 29 ~~l~WS~-~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~-~----------------------------------~~~V~~ 72 (318)
T 4ggc_A 29 NLVDWSS-GNVLAVALDNSVYLWSASSGDILQLLQMEQ-P----------------------------------GEYISS 72 (318)
T ss_dssp BCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCS-T----------------------------------TCCEEE
T ss_pred eEEEECC-CCEEEEEeCCEEEEEECCCCCEEEEEEecC-C----------------------------------CCeEEE
Confidence 3578887 6656566578888888 457654333 211 1 023588
Q ss_pred EEEcCCCCEEEEeCCCCceeeEEEEc
Q psy4832 433 LAFSPTGDLYIADIDARKVNALRVID 458 (770)
Q Consensus 433 iavd~~G~lyVaD~~~~ri~~i~~i~ 458 (770)
|+++++|+++++-...+. |+..+
T Consensus 73 v~~~~~~~~l~sgs~Dg~---v~iw~ 95 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSSAE---VQLWD 95 (318)
T ss_dssp EEECTTSSEEEEEETTSE---EEEEE
T ss_pred EEECCCCCEEEEEECCCc---EEEee
Confidence 999999997777666654 44444
No 312
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=23.56 E-value=3.1e+02 Score=22.62 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=30.8
Q ss_pred eeEEEEcCCCcEEEEcCCCceEEeeecCCcccCCCCcEEEeCCCCCcEEEEecCCceEEEEc
Q psy4832 503 ISALSVSPDGVVNVADQGSLHILALQHYLPTHDEHGEFKIPYPATNEIYVFNRYGQHITTRD 564 (770)
Q Consensus 503 P~giav~~dG~lyvaD~~~~~I~~i~~~~~~~~~~g~~~i~~~~~~e~yvfd~~G~~~~t~d 564 (770)
..-+.+..||.|++.+. +..++.-....+ .. ...+.-.+++.+.+++..+..++..+
T Consensus 20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~---~~-~~~l~l~~dGNLvl~~~~~~~~W~S~ 76 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGL---DR-RCHLSMQSDGNLVVYSPRNNPIWASN 76 (109)
T ss_dssp TEEEEECTTSCEEEEET-TEEEEECCCTTS---SS-SCEEEECTTSCEEEECTTSCEEEECC
T ss_pred CEEEEEcCCCcEEEEeC-CEEEEECCcccC---CC-CEEEEEeCCCCEEEECCCCCEEEECC
Confidence 34567778888888776 334554332211 11 12233334556777777666665443
No 313
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=23.53 E-value=7.9e+02 Score=27.26 Aligned_cols=20 Identities=5% Similarity=0.017 Sum_probs=14.7
Q ss_pred ceEEEeCCCCeEEEEeCCEE
Q psy4832 355 TGLALSPLDDSLHFIDDRVI 374 (770)
Q Consensus 355 ~gla~d~~~g~lyv~D~~~I 374 (770)
.++++||..+.+|+..++.-
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~ 415 (599)
T 1w6s_A 396 GHDSYDPKRELFFMGINHIC 415 (599)
T ss_dssp CBCEEETTTTEEEEEEECEE
T ss_pred CCccCCCCCCEEEEeccccc
Confidence 47899996777888765533
Done!