Query psy4836
Match_columns 69
No_of_seqs 67 out of 69
Neff 3.6
Searched_HMMs 46136
Date Fri Aug 16 18:59:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4836.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4836hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF10240 DUF2464: Protein of u 96.4 0.0022 4.7E-08 47.5 2.4 29 39-69 1-30 (251)
2 smart00800 uDENN Domain always 94.6 0.028 6E-07 34.6 2.0 17 4-20 2-18 (89)
3 PF10240 DUF2464: Protein of u 93.8 0.06 1.3E-06 40.0 2.9 31 36-68 57-87 (251)
4 COG0799 Uncharacterized homolo 82.9 0.71 1.5E-05 31.1 1.3 15 2-16 28-43 (115)
5 PRK11538 ribosome-associated p 69.2 2.9 6.3E-05 27.2 1.3 14 5-18 32-45 (105)
6 TIGR00090 iojap_ybeB iojap-lik 62.3 4.8 0.0001 25.6 1.3 10 5-14 27-36 (99)
7 PF14625 Lustrin_cystein: Lust 60.2 8.8 0.00019 20.6 2.0 18 50-67 20-37 (45)
8 PF02410 Oligomerisation: Olig 53.3 7.2 0.00016 24.6 1.0 12 5-16 27-38 (100)
9 PF10433 MMS1_N: Mono-function 50.7 7.8 0.00017 29.8 1.0 43 7-49 268-310 (504)
10 PF10962 DUF2764: Protein of u 44.5 14 0.0003 28.0 1.4 11 9-19 5-15 (271)
11 KOG0180|consensus 42.4 12 0.00027 27.7 0.9 21 3-23 97-120 (204)
12 PF04942 CC: CC domain; Inter 41.4 22 0.00047 19.4 1.6 16 48-63 13-28 (36)
13 cd01958 HPS_like HPS_like: Hyd 40.7 2.9 6.3E-05 26.9 -2.3 19 43-61 67-85 (85)
14 PF14547 Hydrophob_seed: Hydro 39.8 12 0.00027 23.8 0.5 19 43-61 66-84 (85)
15 KOG4000|consensus 33.9 40 0.00086 26.3 2.5 31 33-65 9-39 (291)
16 KOG3169|consensus 30.9 28 0.00061 26.0 1.2 11 5-15 95-105 (208)
17 smart00289 WR1 Worm-specific r 30.7 34 0.00074 17.3 1.2 13 52-64 19-31 (38)
18 PF12661 hEGF: Human growth fa 26.9 24 0.00053 15.4 0.2 6 55-60 4-9 (13)
19 PF00396 Granulin: Granulin; 25.6 37 0.00081 19.1 0.9 8 55-62 28-35 (43)
20 TIGR01353 dGTP_triPase deoxygu 23.8 15 0.00033 28.5 -1.3 14 4-19 358-371 (381)
21 PRK03007 deoxyguanosinetriphos 23.5 18 0.00039 28.9 -1.0 15 4-20 400-414 (428)
22 PRK01286 deoxyguanosinetriphos 22.7 15 0.00033 28.4 -1.5 15 4-20 307-321 (336)
23 PRK05318 deoxyguanosinetriphos 22.1 20 0.00043 28.4 -1.0 14 4-19 410-423 (432)
No 1
>PF10240 DUF2464: Protein of unknown function (DUF2464); InterPro: IPR018798 FAM125A and FAM125B (also known as Multivesicular body subunit 12) interacts with CD2AP and CIN85/SH3KBP1, and is thought to be involved in the ligand-mediated internalization and down-regulation of EGF receptor [].; PDB: 3TOW_A.
Probab=96.44 E-value=0.0022 Score=47.55 Aligned_cols=29 Identities=34% Similarity=0.607 Sum_probs=15.4
Q ss_pred CCeeeEEEeeccCCCCCCCceEEeeeCCC-CC
Q psy4836 39 APITDLAVIFPTLGEFVPDGYDVIKSTPT-GT 69 (69)
Q Consensus 39 ~PITDiaVI~~slGE~vP~Gftcie~Tp~-G~ 69 (69)
.|||+|+|+.- -++||.||+.|.+|.. |+
T Consensus 1 ~PIT~v~~v~~--~~~cP~gy~~is~T~d~g~ 30 (251)
T PF10240_consen 1 RPITAVGIVAS--KNKCPPGYTVISRTVDQGA 30 (251)
T ss_dssp ----EEEEESS--TT---TT-EE--B-TT-S-
T ss_pred CCcceEEEEec--CCCCCCCCeEEEeeccCCC
Confidence 49999999987 6999999999999988 64
No 2
>smart00800 uDENN Domain always found upstream of DENN domain, found in a variety of signalling proteins. The uDENN domain is part of the tripartite DENN domain. It is always found upstream of the DENN domain itself, which is found in a variety of signalling proteins involved in Rab-mediated processes or regulation of MAPKs signalling pathways. The DENN domain is always encircled on both sides by more divergent domains, called uDENN (for upstream DENN) and dDENN (for downstream DENN). The function of the DENN domain remains to date unclear, although it appears to represent a good candidate for a GTP/GDP exchange activity.
Probab=94.56 E-value=0.028 Score=34.60 Aligned_cols=17 Identities=53% Similarity=0.899 Sum_probs=14.1
Q ss_pred eeeeeeEEEecCCCCCc
Q psy4836 4 RRVADYFVVCGLPDDQA 20 (69)
Q Consensus 4 kRvaDYFVVAGL~~~~~ 20 (69)
+|++|||+|+|+.....
T Consensus 2 ~rl~d~f~vvg~~~~~~ 18 (89)
T smart00800 2 SRLFDYFVVVGLDSDTG 18 (89)
T ss_pred CcceeEEEEEeCCCCCC
Confidence 58999999999976543
No 3
>PF10240 DUF2464: Protein of unknown function (DUF2464); InterPro: IPR018798 FAM125A and FAM125B (also known as Multivesicular body subunit 12) interacts with CD2AP and CIN85/SH3KBP1, and is thought to be involved in the ligand-mediated internalization and down-regulation of EGF receptor [].; PDB: 3TOW_A.
Probab=93.85 E-value=0.06 Score=39.95 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=19.0
Q ss_pred CCCCCeeeEEEeeccCCCCCCCceEEeeeCCCC
Q psy4836 36 HNDAPITDLAVIFPTLGEFVPDGYDVIKSTPTG 68 (69)
Q Consensus 36 ~~~~PITDiaVI~~slGE~vP~Gftcie~Tp~G 68 (69)
....=|+||.||-- +|.+|.||+.|..|..+
T Consensus 57 ~~~~Vv~di~ii~~--k~~~P~Gy~~i~~t~dt 87 (251)
T PF10240_consen 57 TPGNVVTDIQIIDE--KDPIPHGYSYISETVDT 87 (251)
T ss_dssp GG-EEEEEEEEEET--TS---TT-EE--B-TTT
T ss_pred CCCCEEEEEEEecC--CCCCCCCcEeccccccc
Confidence 35567999999985 89999999999999754
No 4
>COG0799 Uncharacterized homolog of plant Iojap protein [Function unknown]
Probab=82.90 E-value=0.71 Score=31.14 Aligned_cols=15 Identities=27% Similarity=0.569 Sum_probs=11.1
Q ss_pred Cce-eeeeeEEEecCC
Q psy4836 2 DDR-RVADYFVVCGLP 16 (69)
Q Consensus 2 eek-RvaDYFVVAGL~ 16 (69)
.++ -++||||||==.
T Consensus 28 ~~~s~~tDyfVIatg~ 43 (115)
T COG0799 28 SGKSSLTDYFVIATGN 43 (115)
T ss_pred cCCcccccEEEEEEeC
Confidence 445 789999999443
No 5
>PRK11538 ribosome-associated protein; Provisional
Probab=69.18 E-value=2.9 Score=27.24 Aligned_cols=14 Identities=14% Similarity=0.539 Sum_probs=10.6
Q ss_pred eeeeeEEEecCCCC
Q psy4836 5 RVADYFVVCGLPDD 18 (69)
Q Consensus 5 RvaDYFVVAGL~~~ 18 (69)
.++||||||-=.-.
T Consensus 32 ~~~Dy~VIatg~S~ 45 (105)
T PRK11538 32 SITDCMIICTGTSS 45 (105)
T ss_pred cccCEEEEEEeCCH
Confidence 78999999964433
No 6
>TIGR00090 iojap_ybeB iojap-like ribosome-associated protein. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes YbeB from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. More recent work in bacteria suggests that the bacterial iojap-related protein physically associates with ribosomes. The function remains unknown.
Probab=62.32 E-value=4.8 Score=25.63 Aligned_cols=10 Identities=50% Similarity=1.072 Sum_probs=8.6
Q ss_pred eeeeeEEEec
Q psy4836 5 RVADYFVVCG 14 (69)
Q Consensus 5 RvaDYFVVAG 14 (69)
.++||||||=
T Consensus 27 ~~~dy~VI~T 36 (99)
T TIGR00090 27 SIADYFVIAS 36 (99)
T ss_pred cccCEEEEEE
Confidence 6899999984
No 7
>PF14625 Lustrin_cystein: Lustrin, cysteine-rich repeated domain
Probab=60.16 E-value=8.8 Score=20.61 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=13.1
Q ss_pred cCCCCCCCceEEeeeCCC
Q psy4836 50 TLGEFVPDGYDVIKSTPT 67 (69)
Q Consensus 50 slGE~vP~Gftcie~Tp~ 67 (69)
+-...+|.||.|...+.+
T Consensus 20 ~~~~~CP~~y~C~~~~~~ 37 (45)
T PF14625_consen 20 SPDNSCPSGYSCHFSTSG 37 (45)
T ss_pred cCCCCCCCcCEeeecCCC
Confidence 444569999999766554
No 8
>PF02410 Oligomerisation: Oligomerisation domain; InterPro: IPR004394 The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. Maize has two RNA polymerases in plastids, but the plastid-encoded one, similar to bacterial RNA polymerases, is missing in iojap mutants. The role of iojap in chloroplast development, and the role of its bacterial orthologs modeled here, is unclear [, ]. This entry contains the bacterial protein YbeB (P0AAT6 from SWISSPROT), which has been shown to comigrate with the mature 50S ribosome subunit. Therefore it either represents a novel ribosome-associated protein or it is associated with a different oligomeric complex that comigrates with ribosomal particles [].; PDB: 2O5A_A 2ID1_B 3UPS_A.
Probab=53.31 E-value=7.2 Score=24.55 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=8.7
Q ss_pred eeeeeEEEecCC
Q psy4836 5 RVADYFVVCGLP 16 (69)
Q Consensus 5 RvaDYFVVAGL~ 16 (69)
-++||||||--.
T Consensus 27 ~~~dy~II~T~~ 38 (100)
T PF02410_consen 27 SWADYFIIATGR 38 (100)
T ss_dssp SS-SEEEEEEES
T ss_pred cccCEEEEEEcC
Confidence 579999999653
No 9
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=50.69 E-value=7.8 Score=29.81 Aligned_cols=43 Identities=26% Similarity=0.217 Sum_probs=24.0
Q ss_pred eeeEEEecCCCCCccchhhcccCccccCCCCCCCeeeEEEeec
Q psy4836 7 ADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFP 49 (69)
Q Consensus 7 aDYFVVAGL~~~~~~L~e~~~~~~~~r~~~~~~PITDiaVI~~ 49 (69)
-||+++++-..++..++-+...-.....-...+||+|++|+--
T Consensus 268 ~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N~~Pi~D~~v~~~ 310 (504)
T PF10433_consen 268 GDYLFVGSEFGDSQLLQISLSNLEVLDSLPNWGPIVDFCVVDS 310 (504)
T ss_dssp --EEEEEESSS-EEEEEEESESEEEEEEE----SEEEEEEE-T
T ss_pred CEEEEEEEecCCcEEEEEeCCCcEEEEeccCcCCccceEEecc
Confidence 3688999988888777654221122345667899999999743
No 10
>PF10962 DUF2764: Protein of unknown function (DUF2764); InterPro: IPR024492 This bacterial family of proteins has no known function.
Probab=44.52 E-value=14 Score=28.02 Aligned_cols=11 Identities=45% Similarity=1.087 Sum_probs=9.8
Q ss_pred eEEEecCCCCC
Q psy4836 9 YFVVCGLPDDQ 19 (69)
Q Consensus 9 YFVVAGL~~~~ 19 (69)
||+|||||+.+
T Consensus 5 Y~lvagLP~~~ 15 (271)
T PF10962_consen 5 YYLVAGLPEIS 15 (271)
T ss_pred eEEeecCCCCC
Confidence 89999999875
No 11
>KOG0180|consensus
Probab=42.44 E-value=12 Score=27.73 Aligned_cols=21 Identities=43% Similarity=0.827 Sum_probs=16.5
Q ss_pred ceeeeeeE---EEecCCCCCccch
Q psy4836 3 DRRVADYF---VVCGLPDDQAEWE 23 (69)
Q Consensus 3 ekRvaDYF---VVAGL~~~~~~L~ 23 (69)
|||.--|| |||||.+..+|.=
T Consensus 97 ekRfgpYf~~PvVAGl~~~~kPfI 120 (204)
T KOG0180|consen 97 EKRFGPYFTEPVVAGLDDDNKPFI 120 (204)
T ss_pred HhhcCCcccceeEeccCCCCCeeE
Confidence 56777788 7999999887763
No 12
>PF04942 CC: CC domain; InterPro: IPR007026 This short domain contains four conserved cysteines that are probably required for the formation of two disulphide bonds. The domain is only found in proteins from Caenorhabditis species. The domain is named after the characteristic CC motif.
Probab=41.44 E-value=22 Score=19.37 Aligned_cols=16 Identities=38% Similarity=0.740 Sum_probs=12.9
Q ss_pred eccCCCCCCCceEEee
Q psy4836 48 FPTLGEFVPDGYDVIK 63 (69)
Q Consensus 48 ~~slGE~vP~Gftcie 63 (69)
-+..+=.||.||++|.
T Consensus 13 ~pai~G~CP~G~~~i~ 28 (36)
T PF04942_consen 13 GPAINGVCPSGYTVIT 28 (36)
T ss_pred cCCcCCcCCCCCEEEC
Confidence 4566788999999984
No 13
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=40.69 E-value=2.9 Score=26.94 Aligned_cols=19 Identities=26% Similarity=0.639 Sum_probs=15.0
Q ss_pred eEEEeeccCCCCCCCceEE
Q psy4836 43 DLAVIFPTLGEFVPDGYDV 61 (69)
Q Consensus 43 DiaVI~~slGE~vP~Gftc 61 (69)
++.++...-|-++|.||+|
T Consensus 67 ~l~llln~CGk~~P~gf~C 85 (85)
T cd01958 67 ALSLLLNSCGRNVPPGFTC 85 (85)
T ss_pred hHHHHHHHHcCcCCCCCcC
Confidence 4455666789999999998
No 14
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=39.82 E-value=12 Score=23.83 Aligned_cols=19 Identities=26% Similarity=0.649 Sum_probs=16.5
Q ss_pred eEEEeeccCCCCCCCceEE
Q psy4836 43 DLAVIFPTLGEFVPDGYDV 61 (69)
Q Consensus 43 DiaVI~~slGE~vP~Gftc 61 (69)
++.++...=|-++|.||+|
T Consensus 66 ~l~~lln~CGk~~p~gf~C 84 (85)
T PF14547_consen 66 ALNLLLNACGKTVPSGFTC 84 (85)
T ss_pred HHHHHHHHhCCcCcCCCcC
Confidence 6677788889999999998
No 15
>KOG4000|consensus
Probab=33.88 E-value=40 Score=26.25 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=24.4
Q ss_pred cCCCCCCCeeeEEEeeccCCCCCCCceEEeeeC
Q psy4836 33 KSNHNDAPITDLAVIFPTLGEFVPDGYDVIKST 65 (69)
Q Consensus 33 r~~~~~~PITDiaVI~~slGE~vP~Gftcie~T 65 (69)
....+-.|||-|.|+.- -+++|.||.-|-+|
T Consensus 9 ~~~~~~~PIT~~~IVad--~nraP~gf~~I~~~ 39 (291)
T KOG4000|consen 9 SFLPDNRPITSLHIVAD--FNRAPKGFSAISRT 39 (291)
T ss_pred ccCCCCCcceeEEEEec--cccCCCccchheee
Confidence 34566789999999986 58999999955444
No 16
>KOG3169|consensus
Probab=30.90 E-value=28 Score=26.00 Aligned_cols=11 Identities=36% Similarity=0.875 Sum_probs=9.8
Q ss_pred eeeeeEEEecC
Q psy4836 5 RVADYFVVCGL 15 (69)
Q Consensus 5 RvaDYFVVAGL 15 (69)
=||||||+.|-
T Consensus 95 PLa~YYII~g~ 105 (208)
T KOG3169|consen 95 PLADYYIINGN 105 (208)
T ss_pred eeeeEEEECce
Confidence 58999999996
No 17
>smart00289 WR1 Worm-specific repeat type 1. Worm-specific repeat type 1. Cysteine-rich domain apparently unique (so far) to C. elegans. Often appears with KU domains. About 3 dozen worm proteins contain this domain.
Probab=30.68 E-value=34 Score=17.34 Aligned_cols=13 Identities=31% Similarity=0.537 Sum_probs=11.3
Q ss_pred CCCCCCceEEeee
Q psy4836 52 GEFVPDGYDVIKS 64 (69)
Q Consensus 52 GE~vP~Gftcie~ 64 (69)
...+|.||+|...
T Consensus 19 ~~~CP~g~~C~~~ 31 (38)
T smart00289 19 NGSCPSGYSCQNS 31 (38)
T ss_pred CCCCCCCCEEecC
Confidence 6889999999865
No 18
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=26.94 E-value=24 Score=15.36 Aligned_cols=6 Identities=33% Similarity=0.977 Sum_probs=3.8
Q ss_pred CCCceE
Q psy4836 55 VPDGYD 60 (69)
Q Consensus 55 vP~Gft 60 (69)
+|+||+
T Consensus 4 C~~G~~ 9 (13)
T PF12661_consen 4 CPPGWT 9 (13)
T ss_dssp E-TTEE
T ss_pred CcCCCc
Confidence 688886
No 19
>PF00396 Granulin: Granulin; InterPro: IPR000118 Metazoan granulins [] are a family of cysteine-rich peptides of about 6 Kd which may have multiple biological activity. A precursor protein (known as acrogranin) potentially encodes seven different forms of granulin (grnA to grnG) which are probably released by post-translational proteolytic processing. Granulins are evolutionary related to a PMP-D1, a peptide extracted from the pars intercerebralis of migratory locusts []. A schematic representation of the structure of a granulin is shown below: xxxCxxxxxCxxxxxCCxxxxxxxxCCxxxxxxCCxxxxxCCxxxxxCxxxxxxCx 'C': conserved cysteine probably involved in a disulphide bond. In plants a granulin domain is often associated with the C terminus of cysteine proteases belong to the MEROPS peptidase family C1, subfamily C1A (papain).; PDB: 1I8Y_A 1QGM_A 1I8X_A 2JYT_A 2JYU_A 1FWO_A 2JYV_A 2JYE_A 1G26_A.
Probab=25.57 E-value=37 Score=19.13 Aligned_cols=8 Identities=38% Similarity=0.775 Sum_probs=6.7
Q ss_pred CCCceEEe
Q psy4836 55 VPDGYDVI 62 (69)
Q Consensus 55 vP~Gftci 62 (69)
+|.||+|-
T Consensus 28 CP~G~~C~ 35 (43)
T PF00396_consen 28 CPHGYTCD 35 (43)
T ss_dssp SSTTSEEE
T ss_pred CCCcCEEC
Confidence 79999984
No 20
>TIGR01353 dGTP_triPase deoxyguanosinetriphosphate triphosphohydrolase, putative. dGTP triphosphohydrolase (dgt) releases inorganic triphosphate, an unusual activity reaction product, from GTP. Its activity has been called limited to the Enterobacteriaceae, although homologous sequences are detected elsewhere. This finding casts doubt on whether the activity is shared in other species. In several of these other species, the homologous gene is found in an apparent operon with dnaG, the DNA primase gene. The enzyme from E. coli was shown to bind coopertatively to single stranded DNA. The biological role of dgt is unknown.
Probab=23.76 E-value=15 Score=28.51 Aligned_cols=14 Identities=43% Similarity=0.831 Sum_probs=11.4
Q ss_pred eeeeeeEEEecCCCCC
Q psy4836 4 RRVADYFVVCGLPDDQ 19 (69)
Q Consensus 4 kRvaDYFVVAGL~~~~ 19 (69)
|.|+|| ||||||+-
T Consensus 358 r~V~DY--ISGMTD~Y 371 (381)
T TIGR01353 358 RVVCDY--IAGMTDRY 371 (381)
T ss_pred hhHHhc--ccCChHHH
Confidence 378898 89999874
No 21
>PRK03007 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional
Probab=23.48 E-value=18 Score=28.85 Aligned_cols=15 Identities=27% Similarity=0.463 Sum_probs=12.3
Q ss_pred eeeeeeEEEecCCCCCc
Q psy4836 4 RRVADYFVVCGLPDDQA 20 (69)
Q Consensus 4 kRvaDYFVVAGL~~~~~ 20 (69)
|.|+|| ||||||+-.
T Consensus 400 r~V~DY--IAGMTD~yA 414 (428)
T PRK03007 400 RVVVDQ--IASLTESRL 414 (428)
T ss_pred hhhhhc--cccChHHHH
Confidence 478999 899999853
No 22
>PRK01286 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional
Probab=22.68 E-value=15 Score=28.41 Aligned_cols=15 Identities=53% Similarity=0.902 Sum_probs=12.1
Q ss_pred eeeeeeEEEecCCCCCc
Q psy4836 4 RRVADYFVVCGLPDDQA 20 (69)
Q Consensus 4 kRvaDYFVVAGL~~~~~ 20 (69)
+.|+|| ||||||+-.
T Consensus 307 r~V~DY--ISGMTD~YA 321 (336)
T PRK01286 307 RAVADY--IAGMTDRYA 321 (336)
T ss_pred hhHHHh--hccCcHHHH
Confidence 378998 899999853
No 23
>PRK05318 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional
Probab=22.07 E-value=20 Score=28.42 Aligned_cols=14 Identities=36% Similarity=0.885 Sum_probs=11.5
Q ss_pred eeeeeeEEEecCCCCC
Q psy4836 4 RRVADYFVVCGLPDDQ 19 (69)
Q Consensus 4 kRvaDYFVVAGL~~~~ 19 (69)
|.|+|| ||||||+-
T Consensus 410 r~V~Dy--ISGMTD~y 423 (432)
T PRK05318 410 RVICDY--ISGMTDEY 423 (432)
T ss_pred hhhhhc--ccCChHHH
Confidence 378998 89999864
Done!