Query psy4836
Match_columns 69
No_of_seqs 67 out of 69
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 19:00:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tow_A Multivesicular BODY sub 98.7 9E-09 3.1E-13 70.8 3.4 30 38-69 1-30 (152)
2 3tow_A Multivesicular BODY sub 97.0 0.0003 1E-08 48.2 2.4 31 37-69 61-91 (152)
3 2qp2_A Unknown protein; toxin, 76.7 1.9 6.4E-05 33.5 3.2 60 5-64 414-487 (511)
4 2qp2_A Unknown protein; toxin, 76.5 1.8 6.2E-05 33.6 3.1 26 37-64 411-437 (511)
5 2o5a_A BH1328 protein; BHR21, 74.6 1 3.5E-05 29.4 1.1 10 5-14 32-41 (125)
6 2id1_A Hypothetical protein; a 72.4 1.2 4.1E-05 29.3 1.0 11 5-15 32-42 (130)
7 3ups_A Iojap-like protein; PSI 70.9 1.3 4.6E-05 29.3 1.0 12 5-16 48-59 (136)
8 1hyp_A Hydrophobic protein fro 59.3 2.4 8.3E-05 26.4 0.4 20 43-62 59-78 (80)
9 2zkr_w 60S ribosomal protein L 42.1 1.8 6E-05 31.8 -2.6 56 5-64 156-211 (270)
10 1xkm_A Distinctin chain A; por 40.3 3.1 0.0001 21.0 -1.1 11 53-63 3-13 (26)
11 2w7n_A TRFB transcriptional re 39.6 14 0.00047 23.1 1.6 13 53-65 65-77 (101)
12 1v18_B APC protein, adenomatou 34.9 12 0.00041 21.3 0.7 16 48-63 8-23 (47)
13 3f1j_A Matrix protein, GP18, P 33.2 8.2 0.00028 26.0 -0.2 12 2-13 53-64 (142)
14 2jv4_A Peptidyl-prolyl CIS/tra 28.6 34 0.0012 18.9 1.9 16 53-68 6-21 (54)
15 4h61_A Mediator of RNA polymer 27.7 23 0.00078 24.1 1.3 11 5-15 99-109 (175)
16 4gwp_G Mediator of RNA polymer 25.9 27 0.00092 25.5 1.5 11 5-15 149-159 (295)
17 3jsb_A Protein L, RNA-directed 23.4 27 0.00093 25.0 1.0 24 42-65 81-104 (204)
18 2ho2_A Fe65 protein, amyloid b 23.3 57 0.0019 16.9 2.1 13 52-64 1-13 (38)
19 2e56_A Lymphocyte antigen 96; 22.1 77 0.0026 21.5 3.1 23 40-64 97-120 (144)
20 3jyw_F 60S ribosomal protein L 20.7 5.6 0.00019 27.6 -2.9 55 5-63 97-151 (213)
21 2dwv_A Salvador homolog 1 prot 20.1 64 0.0022 17.4 1.9 16 52-68 11-26 (49)
22 2j6b_A AFV3-109; sulfolobus, c 20.0 48 0.0016 21.4 1.6 17 42-59 72-88 (109)
No 1
>3tow_A Multivesicular BODY subunit 12B; beta prism, membrane binding domain, negatively charged MEMB protein transport; 1.34A {Homo sapiens}
Probab=98.69 E-value=9e-09 Score=70.77 Aligned_cols=30 Identities=37% Similarity=0.634 Sum_probs=27.7
Q ss_pred CCCeeeEEEeeccCCCCCCCceEEeeeCCCCC
Q psy4836 38 DAPITDLAVIFPTLGEFVPDGYDVIKSTPTGT 69 (69)
Q Consensus 38 ~~PITDiaVI~~slGE~vP~Gftcie~Tp~G~ 69 (69)
.+|||||+|+.. +|+||+||+||+.|+.|+
T Consensus 1 ~~PIT~v~vv~~--~~~~P~gy~~Is~T~dG~ 30 (152)
T 3tow_A 1 MDPITGVGVVAS--RNRAPTGYDVVAQTADGV 30 (152)
T ss_dssp CCCCCEEEEESS--TTCCCTTCEECCBCTTSC
T ss_pred CCCccEEEEEec--CCCCCCCCeEEEecCCCC
Confidence 389999999986 899999999999999985
No 2
>3tow_A Multivesicular BODY subunit 12B; beta prism, membrane binding domain, negatively charged MEMB protein transport; 1.34A {Homo sapiens}
Probab=97.02 E-value=0.0003 Score=48.22 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=27.8
Q ss_pred CCCCeeeEEEeeccCCCCCCCceEEeeeCCCCC
Q psy4836 37 NDAPITDLAVIFPTLGEFVPDGYDVIKSTPTGT 69 (69)
Q Consensus 37 ~~~PITDiaVI~~slGE~vP~Gftcie~Tp~G~ 69 (69)
...+||||.|| ...|.+|+||+.|+.|+.++
T Consensus 61 ~~~VvtDl~vi--~~Kd~lP~Gf~~I~~T~dt~ 91 (152)
T 3tow_A 61 LGNVLVDMKLI--DIKDTLPVGFIPIQETVDTQ 91 (152)
T ss_dssp GCEEEEEEEEE--ETTSCCCTTCEECCBCTTTC
T ss_pred CCCeEEEEEEE--eCCCCCCCCcEEeeccCCcc
Confidence 47899999999 57999999999999999764
No 3
>2qp2_A Unknown protein; toxin, unknown function; 2.00A {Photorhabdus luminescens subsp}
Probab=76.69 E-value=1.9 Score=33.48 Aligned_cols=60 Identities=12% Similarity=0.251 Sum_probs=35.2
Q ss_pred eeeeeEEEecCCCC----CccchhhcccC-cc-----ccCCCC--CCCeeeEEEeeccCCCC--CCCceEEeee
Q psy4836 5 RVADYFVVCGLPDD----QAEWEEETSEH-SH-----YKSNHN--DAPITDLAVIFPTLGEF--VPDGYDVIKS 64 (69)
Q Consensus 5 RvaDYFVVAGL~~~----~~~L~e~~~~~-~~-----~r~~~~--~~PITDiaVI~~slGE~--vP~Gftcie~ 64 (69)
.|.|--|+-|=... ..+++.|.+.+ ++ .+...+ ..|||||-||.-+.|+. .|.||.-|..
T Consensus 414 ~i~~~~~~~~~~~~~~~~~~~~~~dln~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~ 487 (511)
T 2qp2_A 414 CITELKFITVRDKSPEGDWVKIPQDIYISPNQYLYLCYLPAKYSAEKAIKDIQLLCSSCGSSMILPYGYNDVLD 487 (511)
T ss_dssp EEEEEEEECSTTCCCSTTCEECSSCSCCSTTCCCEEEEEEESCCTTTSCCEEEEEECC----CSCCTTCEECBC
T ss_pred cceEEEEecCCCCCCCCCceEcccccccCCCcEEEEEEecCCCCCCCCccceEEEecCCCCcCCCCCccccccc
Confidence 56676666665333 33555662222 33 133223 35999999999998988 8899998764
No 4
>2qp2_A Unknown protein; toxin, unknown function; 2.00A {Photorhabdus luminescens subsp}
Probab=76.50 E-value=1.8 Score=33.56 Aligned_cols=26 Identities=31% Similarity=0.401 Sum_probs=22.1
Q ss_pred CCCCeeeEEEeeccCCCCCCCc-eEEeee
Q psy4836 37 NDAPITDLAVIFPTLGEFVPDG-YDVIKS 64 (69)
Q Consensus 37 ~~~PITDiaVI~~slGE~vP~G-ftcie~ 64 (69)
...|||||+||.- .+.+|+| |+-|+.
T Consensus 411 ~~~~i~~~~~~~~--~~~~~~~~~~~~~~ 437 (511)
T 2qp2_A 411 NKDCITELKFITV--RDKSPEGDWVKIPQ 437 (511)
T ss_dssp CCCEEEEEEEECS--TTCCCSTTCEECSS
T ss_pred CCCcceEEEEecC--CCCCCCCCceEccc
Confidence 4799999999987 6789999 998764
No 5
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=74.64 E-value=1 Score=29.38 Aligned_cols=10 Identities=40% Similarity=1.168 Sum_probs=6.9
Q ss_pred eeeeeEEEec
Q psy4836 5 RVADYFVVCG 14 (69)
Q Consensus 5 RvaDYFVVAG 14 (69)
-++||||||-
T Consensus 32 ~~~DyfVIat 41 (125)
T 2o5a_A 32 LIADFFLICH 41 (125)
T ss_dssp C--CEEEEEE
T ss_pred cccCEEEEEE
Confidence 6899999994
No 6
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=72.39 E-value=1.2 Score=29.34 Aligned_cols=11 Identities=9% Similarity=0.048 Sum_probs=9.1
Q ss_pred eeeeeEEEecC
Q psy4836 5 RVADYFVVCGL 15 (69)
Q Consensus 5 RvaDYFVVAGL 15 (69)
-++||||||-=
T Consensus 32 ~~~DyfVIaTg 42 (130)
T 2id1_A 32 SLFQRMIVATG 42 (130)
T ss_dssp SSCSEEEEEEC
T ss_pred cccCEEEEEEc
Confidence 68999999943
No 7
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=70.88 E-value=1.3 Score=29.28 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=9.5
Q ss_pred eeeeeEEEecCC
Q psy4836 5 RVADYFVVCGLP 16 (69)
Q Consensus 5 RvaDYFVVAGL~ 16 (69)
-++||||||-=.
T Consensus 48 ~~~DyfVIatg~ 59 (136)
T 3ups_A 48 SIADYMVIASGR 59 (136)
T ss_dssp SSCSEEEEEECS
T ss_pred cccCEEEEEEcC
Confidence 689999999543
No 8
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=59.29 E-value=2.4 Score=26.35 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.2
Q ss_pred eEEEeeccCCCCCCCceEEe
Q psy4836 43 DLAVIFPTLGEFVPDGYDVI 62 (69)
Q Consensus 43 DiaVI~~slGE~vP~Gftci 62 (69)
++.++...-|-++|.||+|-
T Consensus 59 ~L~llln~Cgk~~P~gF~C~ 78 (80)
T 1hyp_A 59 NLQLILNSCGRSYPSNATCP 78 (80)
T ss_dssp HHHHHHHHTTCSSCCCCCCS
T ss_pred hHHHHHHHhCCcCcCCCCCC
Confidence 45567777899999999994
No 9
>2zkr_w 60S ribosomal protein L7; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=42.12 E-value=1.8 Score=31.76 Aligned_cols=56 Identities=23% Similarity=0.391 Sum_probs=37.7
Q ss_pred eeeeeEEEecCCCCCccchhhcccCccccCCCCCCCeeeEEEeeccCCCCCCCceEEeee
Q psy4836 5 RVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIKS 64 (69)
Q Consensus 5 RvaDYFVVAGL~~~~~~L~e~~~~~~~~r~~~~~~PITDiaVI~~slGE~vP~Gftcie~ 64 (69)
|.+.++|..|-++-.+ +.+-..--|..+.....-||||=.||-..||.. |+-|||-
T Consensus 156 ~kV~~~V~vgepnlks-v~eLi~KRG~~ki~~k~i~LtdN~iIee~LG~~---giiciED 211 (270)
T 2zkr_w 156 RIVEPYIAWGYPNLKS-VNELIYKRGYGKINKKRIALTDNSLIARSLGKF---GIICMED 211 (270)
T ss_dssp TSSTTSCBCCCCCTTT-HHHHHHHCCCCSSSSSCSCSSHHHHSSSSSCSS---CCCSHHH
T ss_pred HhcccceeEecCCHHH-HHHHHHhhcccccCCeeeeCCchHHHHhhccCc---CcchHHH
Confidence 6678888888865543 222222223234444556999999999999995 9999873
No 10
>1xkm_A Distinctin chain A; pore-forming peptide, heterodimer, structure, homodimer, disulfide, four-helix bundle, antibiotic; NMR {Synthetic} SCOP: j.4.1.6
Probab=40.27 E-value=3.1 Score=21.05 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=8.4
Q ss_pred CCCCCceEEee
Q psy4836 53 EFVPDGYDVIK 63 (69)
Q Consensus 53 E~vP~Gftcie 63 (69)
.+||+|||-+-
T Consensus 3 revppgftali 13 (26)
T 1xkm_A 3 REVPPGFTALI 13 (26)
T ss_dssp TCSCHHHHHHH
T ss_pred CcCCCcHHHHH
Confidence 58999998543
No 11
>2w7n_A TRFB transcriptional repressor protein; INCP, plasmid, repressor, DNA-binding, transcription/DNA; HET: BRU; 1.85A {Escherichia coli}
Probab=39.65 E-value=14 Score=23.11 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=10.9
Q ss_pred CCCCCceEEeeeC
Q psy4836 53 EFVPDGYDVIKST 65 (69)
Q Consensus 53 E~vP~Gftcie~T 65 (69)
+.+|+||.+|+..
T Consensus 65 ~~~P~g~~rv~v~ 77 (101)
T 2w7n_A 65 KNLPEGYARVTAV 77 (101)
T ss_dssp TCCCTTEEEEEEE
T ss_pred cCCCCCeeEEeee
Confidence 3799999999865
No 12
>1v18_B APC protein, adenomatous polyposis coli; signaling protein, signalling complex, WNT signal, beta-catenin degradation complex, cell adhesion; HET: SEP; 2.1A {Homo sapiens}
Probab=34.92 E-value=12 Score=21.27 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=10.0
Q ss_pred eccCCCCCCCceEEee
Q psy4836 48 FPTLGEFVPDGYDVIK 63 (69)
Q Consensus 48 ~~slGE~vP~Gftcie 63 (69)
..-.-|+-|+||.|-.
T Consensus 8 ~~F~~E~~~~~FScaS 23 (47)
T 1v18_B 8 LHFATESTPDGFSCSS 23 (47)
T ss_dssp CCCCCCSCCCCCC---
T ss_pred EEEeeecCCCCccchh
Confidence 3334699999999964
No 13
>3f1j_A Matrix protein, GP18, P16; viral matrix protein, RNA binding, membrane binding, viruses, ssRNA negative-strand viruses, mononegavirales; HET: C5P; 2.65A {Borna disease virus}
Probab=33.23 E-value=8.2 Score=25.97 Aligned_cols=12 Identities=25% Similarity=0.822 Sum_probs=9.9
Q ss_pred CceeeeeeEEEe
Q psy4836 2 DDRRVADYFVVC 13 (69)
Q Consensus 2 eekRvaDYFVVA 13 (69)
.|||++|||-+-
T Consensus 53 rek~l~dy~tid 64 (142)
T 3f1j_A 53 REKKLTDYFTID 64 (142)
T ss_dssp SSCCHHHHEEEE
T ss_pred hhhcceeeEEEe
Confidence 478999999873
No 14
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=28.58 E-value=34 Score=18.93 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=11.9
Q ss_pred CCCCCceEEeeeCCCC
Q psy4836 53 EFVPDGYDVIKSTPTG 68 (69)
Q Consensus 53 E~vP~Gftcie~Tp~G 68 (69)
+.+|+||+.......|
T Consensus 6 ~~LP~GW~~~~~~~~G 21 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKN 21 (54)
T ss_dssp CCCCSSCCEEECSSSS
T ss_pred CCCCCCcEEEEECCCC
Confidence 5699999987655555
No 15
>4h61_A Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; 2.70A {Schizosaccharomyces pombe} PDB: 4h63_F
Probab=27.66 E-value=23 Score=24.11 Aligned_cols=11 Identities=27% Similarity=0.341 Sum_probs=9.4
Q ss_pred eeeeeEEEecC
Q psy4836 5 RVADYFVVCGL 15 (69)
Q Consensus 5 RvaDYFVVAGL 15 (69)
-+|+||||.|-
T Consensus 99 ~la~YyIi~g~ 109 (175)
T 4h61_A 99 PLTVYFVCNEN 109 (175)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEEEEECCE
Confidence 48999999884
No 16
>4gwp_G Mediator of RNA polymerase II transcription subun; binding sites, mediator complex, models, molecular, phosphor protein structure; 4.20A {Saccharomyces cerevisiae S288C} PDB: 3rj1_G 4gwq_G
Probab=25.94 E-value=27 Score=25.54 Aligned_cols=11 Identities=18% Similarity=0.607 Sum_probs=9.2
Q ss_pred eeeeeEEEecC
Q psy4836 5 RVADYFVVCGL 15 (69)
Q Consensus 5 RvaDYFVVAGL 15 (69)
=+++||||.|=
T Consensus 149 pLa~YYIig~~ 159 (295)
T 4gwp_G 149 PLQDYYIIGAN 159 (295)
T ss_dssp CEEEEEEEEET
T ss_pred EeEEEEEECCE
Confidence 37999999985
No 17
>3jsb_A Protein L, RNA-directed RNA polymerase; viral protein, vizier, structural genomics, marseilles struc genomics program @ AFMB; 2.13A {Lymphocytic choriomeningitis virus}
Probab=23.40 E-value=27 Score=24.97 Aligned_cols=24 Identities=29% Similarity=0.731 Sum_probs=19.4
Q ss_pred eeEEEeeccCCCCCCCceEEeeeC
Q psy4836 42 TDLAVIFPTLGEFVPDGYDVIKST 65 (69)
Q Consensus 42 TDiaVI~~slGE~vP~Gftcie~T 65 (69)
.|=.|+.|+|-.-||+||..+-.|
T Consensus 81 ~d~gIv~PtLP~VvPDGykl~G~~ 104 (204)
T 3jsb_A 81 VESGIVCPGLPLIIPDGYKLIDNS 104 (204)
T ss_dssp HTTTCCCCSCCCCCCSEEEEETTE
T ss_pred HhcCccCCCCccccCCcceeeCCE
Confidence 344688999999999999987554
No 18
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=23.32 E-value=57 Score=16.86 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=9.3
Q ss_pred CCCCCCceEEeee
Q psy4836 52 GEFVPDGYDVIKS 64 (69)
Q Consensus 52 GE~vP~Gftcie~ 64 (69)
|..+|+||+-...
T Consensus 1 ~~~LP~GWe~~~d 13 (38)
T 2ho2_A 1 GSDLPAGWMRVQD 13 (38)
T ss_dssp -CCSCTTEEEEEC
T ss_pred CCcCCCCceEEEe
Confidence 5678999987654
No 19
>2e56_A Lymphocyte antigen 96; innate immunity, lipid-binding, lipid binding protein; HET: NAG MYR; 2.00A {Homo sapiens} PDB: 2e59_A* 3fxi_C* 3ula_B* 2z65_C*
Probab=22.14 E-value=77 Score=21.47 Aligned_cols=23 Identities=22% Similarity=0.358 Sum_probs=18.3
Q ss_pred CeeeEEEeeccCCCCCCCc-eEEeee
Q psy4836 40 PITDLAVIFPTLGEFVPDG-YDVIKS 64 (69)
Q Consensus 40 PITDiaVI~~slGE~vP~G-ftcie~ 64 (69)
=-|++-+-++ |=+.|+| |+|+-.
T Consensus 97 i~t~~p~s~~--g~~fpkG~Y~~~~e 120 (144)
T 2e56_A 97 VNTTISFSFK--GIKFSKGKYKCVVE 120 (144)
T ss_dssp EEEEEEEEEC--CCTTCCSEEEEEEE
T ss_pred EEEeeecccC--cEecCCCcEEEEEE
Confidence 4578888888 7799999 999843
No 20
>3jyw_F 60S ribosomal protein L7(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_F
Probab=20.74 E-value=5.6 Score=27.56 Aligned_cols=55 Identities=24% Similarity=0.350 Sum_probs=33.8
Q ss_pred eeeeeEEEecCCCCCccchhhcccCccccCCCCCCCeeeEEEeeccCCCCCCCceEEee
Q psy4836 5 RVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIK 63 (69)
Q Consensus 5 RvaDYFVVAGL~~~~~~L~e~~~~~~~~r~~~~~~PITDiaVI~~slGE~vP~Gftcie 63 (69)
|+++=||.-|-++-.+. .+-...-+..+.....-|+||=.||-..||. -|+.|+|
T Consensus 97 ~~VepyV~~G~p~l~tv-~eLi~KRg~~k~~~~~i~ltdn~iie~~lg~---~gi~cie 151 (213)
T 3jyw_F 97 KLIEPYVAYGYPSYSTI-RQLVYKRGFGKINKQRVPLSDNAIIEANLGK---YGILSID 151 (213)
T ss_dssp HHTTTTSCEECCCSSTT-TSHHHHSCCCSSSCCSSCSSSHHHHSSSSCC---SCCCCHH
T ss_pred hhccchheeecCCHHHH-HHHHHhcCcccCCCCeecCCcchHHHHhccC---CCceeHH
Confidence 34444566666655432 2211222333445555799999999999995 4999987
No 21
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.11 E-value=64 Score=17.38 Aligned_cols=16 Identities=25% Similarity=0.399 Sum_probs=12.1
Q ss_pred CCCCCCceEEeeeCCCC
Q psy4836 52 GEFVPDGYDVIKSTPTG 68 (69)
Q Consensus 52 GE~vP~Gftcie~Tp~G 68 (69)
+..+|.||+.... +.|
T Consensus 11 ~~~LP~GWe~~~d-~~g 26 (49)
T 2dwv_A 11 REGLPPGWERVES-SEF 26 (49)
T ss_dssp SSCCCTTEEEEEE-TTT
T ss_pred CCCCCcCcEEEEC-CCC
Confidence 5789999998854 444
No 22
>2j6b_A AFV3-109; sulfolobus, crenarchaea, viral protein; 1.3A {Acidianus filamentous virus 1} SCOP: d.321.1.1 PDB: 2j6c_A
Probab=20.03 E-value=48 Score=21.39 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=15.4
Q ss_pred eeEEEeeccCCCCCCCce
Q psy4836 42 TDLAVIFPTLGEFVPDGY 59 (69)
Q Consensus 42 TDiaVI~~slGE~vP~Gf 59 (69)
-|-|.+|. |+++.|||=
T Consensus 72 GD~alv~~-L~~Rl~EG~ 88 (109)
T 2j6b_A 72 GDRILAFM-LKQRLPEGV 88 (109)
T ss_dssp TCEEEEEE-ESSCCCTTC
T ss_pred CCEEEEEE-ecccCCCCe
Confidence 79999998 999999994
Done!