BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4837
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3KMZ6|COX11_BOVIN Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Bos
taurus GN=COX11 PE=2 SV=1
Length = 282
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 56/61 (91%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETALAFY AKNPT+ P++GISTYNVVPF+AGQYFNKIQCFCFEEQ+LNP EE+
Sbjct: 168 IYVVPGETALAFYKAKNPTDKPVIGISTYNVVPFEAGQYFNKIQCFCFEEQRLNPQEEVD 227
Query: 71 I 71
+
Sbjct: 228 M 228
>sp|Q6P8I6|COX11_MOUSE Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Mus
musculus GN=Cox11 PE=2 SV=1
Length = 275
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 56/61 (91%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETALAFY AKNPT+ P++GISTYNVVPF+AGQYFNKIQCFCFEEQ+LNP EE+
Sbjct: 172 IYVVPGETALAFYKAKNPTDKPVIGISTYNVVPFEAGQYFNKIQCFCFEEQRLNPQEEVD 231
Query: 71 I 71
+
Sbjct: 232 M 232
>sp|Q9Y6N1|COX11_HUMAN Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo
sapiens GN=COX11 PE=1 SV=3
Length = 276
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 56/61 (91%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETALAFY AKNPT+ P++GISTYN+VPF+AGQYFNKIQCFCFEEQ+LNP EE+
Sbjct: 173 IYVVPGETALAFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQCFCFEEQRLNPQEEVD 232
Query: 71 I 71
+
Sbjct: 233 M 233
>sp|Q5R7U6|COX11_PONAB Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Pongo
abelii GN=COX11 PE=3 SV=2
Length = 277
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 56/62 (90%), Gaps = 1/62 (1%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKI-QCFCFEEQQLNPHEEL 69
++V PGETALAFY AKNPT+ P++GISTYN+VPF+AGQYFNKI QCFCFEEQ+LNP EE+
Sbjct: 173 IYVVPGETALAFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQQCFCFEEQRLNPQEEV 232
Query: 70 QI 71
+
Sbjct: 233 DM 234
>sp|O21243|COXZ_RECAM Cytochrome c oxidase assembly protein ctaG OS=Reclinomonas
americana GN=CTAG PE=3 SV=1
Length = 182
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GETALAFY+A+NPT+S I+GISTYNV P AG YFNKIQCFCFEEQ+L PHE +
Sbjct: 88 IKVMVGETALAFYSAENPTDSSIIGISTYNVNPQQAGIYFNKIQCFCFEEQRLKPHETID 147
Query: 71 I 71
+
Sbjct: 148 M 148
>sp|Q8GWR0|COX11_ARATH Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1
Length = 287
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V PGE+ALAFYTA+N +++PI G+STYNV P AG YFNKIQCFCFEEQ+L P E++
Sbjct: 175 VRVKPGESALAFYTAENKSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQID 234
Query: 71 I 71
+
Sbjct: 235 M 235
>sp|P19516|COX11_YEAST Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COX11 PE=3 SV=2
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETALAFY AKN ++ I+G++TY++ P +A QYFNKIQCFCFEEQ+L EE+
Sbjct: 164 VYVLPGETALAFYKAKNYSDKDIIGMATYSIAPGEAAQYFNKIQCFCFEEQKLAAGEEID 223
Query: 71 I 71
+
Sbjct: 224 M 224
>sp|Q9UTM2|CO111_SCHPO Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cox1101 PE=1 SV=2
Length = 753
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETAL FYTA+N ++ IVG++TYN+VP A YF+K+ CFCFEEQ+L+ HE++
Sbjct: 649 IYVLPGETALGFYTAENTSDHDIVGVATYNIVPGQAAVYFSKVACFCFEEQKLDAHEKVD 708
Query: 71 I 71
+
Sbjct: 709 L 709
>sp|Q86ZU7|CO112_SCHPO Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cos1102 PE=1 SV=2
Length = 753
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V PGETAL FYTA+N ++ IVG++TYN+VP A YF+K+ CFCFEEQ+L+ HE++
Sbjct: 649 IYVLPGETALGFYTAENTSDHDIVGVATYNIVPGQAAVYFSKVACFCFEEQKLDAHEKVD 708
Query: 71 I 71
+
Sbjct: 709 L 709
>sp|Q54HM6|COX11_DICDI Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Dictyostelium discoideum GN=cox11 PE=3 SV=1
Length = 312
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 10 TLHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEEL 69
T+ PGE L FY A N T++PI+G++TYN+ P AG YF KIQCFCF+EQ++N HE +
Sbjct: 211 TIECLPGEPVLCFYRATNNTDTPIIGVATYNITPMKAGTYFTKIQCFCFDEQRINAHETI 270
Query: 70 QI 71
+
Sbjct: 271 DM 272
>sp|Q167V9|COXZ_ROSDO Cytochrome c oxidase assembly protein CtaG OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=ctaG PE=3
SV=1
Length = 194
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GE+ LAFY A NPT+ P+ G ++YNV P+ AG +FNKIQCFCFEEQ L P E +Q
Sbjct: 82 MDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGFFNKIQCFCFEEQVLQPGERVQ 141
Query: 71 I 71
+
Sbjct: 142 M 142
>sp|Q5LNX9|COXZ_RUEPO Cytochrome c oxidase assembly protein CtaG OS=Ruegeria pomeroyi
(strain ATCC 700808 / DSM 15171 / DSS-3) GN=ctaG PE=3
SV=1
Length = 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET LAFY A NPT+ P+ G ++YNV P+ AG YF+KI CFCFEEQ L P E +Q+
Sbjct: 87 GETGLAFYEAYNPTDRPVAGQASYNVAPYSAGGYFDKIACFCFEEQVLQPGERVQM 142
>sp|Q1GE51|COXZ_RUEST Cytochrome c oxidase assembly protein CtaG OS=Ruegeria sp. (strain
TM1040) GN=ctaG PE=3 SV=1
Length = 195
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET LAFY A NPT+ P+ G ++YNV PF AG YF+KIQCFCF EQ L P E + +
Sbjct: 87 GETGLAFYEAYNPTDRPVAGQASYNVAPFSAGYYFDKIQCFCFNEQVLQPGERVMM 142
>sp|A4WQ59|COXZ_RHOS5 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ctaG PE=3
SV=1
Length = 192
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET LAFY A NPT+ + G ++YNV P AG YF KI CFCF EQ L P E ++
Sbjct: 82 MEVRIGETGLAFYEAYNPTDRTVAGTASYNVTPDAAGGYFAKIACFCFTEQVLAPGERVE 141
Query: 71 I 71
+
Sbjct: 142 M 142
>sp|P56940|COXZ_RHOSH Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides GN=ctaG PE=1 SV=1
Length = 191
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET LAFY A NPT+ + G ++YNV P AG YF KI CFCF EQ L P E +++
Sbjct: 87 GETGLAFYEAYNPTDRTVAGTASYNVTPDAAGGYFAKIACFCFTEQVLAPGERVEM 142
>sp|Q3J5F7|COXZ_RHOS4 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=ctaG PE=3 SV=1
Length = 191
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET LAFY A NPT+ + G ++YNV P AG YF KI CFCF EQ L P E +++
Sbjct: 87 GETGLAFYEAYNPTDRTVAGTASYNVTPDAAGGYFAKIACFCFTEQVLAPGERVEM 142
>sp|A1BA38|COXZ_PARDP Cytochrome c oxidase assembly protein CtaG OS=Paracoccus
denitrificans (strain Pd 1222) GN=ctaG PE=3 SV=1
Length = 195
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GE A+AFY A N T+ P+ G ++YNV P AG +FNKI+CFCF EQ L P E +++
Sbjct: 90 GENAIAFYEAINNTDEPVTGTASYNVAPDAAGYFFNKIECFCFTEQTLQPGERVEM 145
>sp|P08303|COXZ_PARDE Cytochrome c oxidase assembly protein CtaG OS=Paracoccus
denitrificans GN=ctaG PE=3 SV=1
Length = 194
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GE A+AFY A N T+ P+ G ++YNV P AG +FNKI+CFCF EQ L P E +++
Sbjct: 90 GENAIAFYEAINNTDEPVTGTASYNVAPDAAGYFFNKIECFCFTEQTLQPGERVEM 145
>sp|A3PGX7|COXZ_RHOS1 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ctaG PE=3
SV=1
Length = 191
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET LAFY A NPT+ + G ++YNV P AG YF KI CFCF EQ L P E +++
Sbjct: 87 GETGLAFYEAYNPTDRTVAGTASYNVTPDAAGGYFAKIACFCFTEQVLAPGERVEM 142
>sp|Q9ZDM3|COXZ_RICPR Cytochrome c oxidase assembly protein CtaG OS=Rickettsia prowazekii
(strain Madrid E) GN=ctaG PE=3 SV=1
Length = 178
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEEL 69
+ + PG+ L FY A+N +N I+G S YNV P AG+YF KI CFCFEEQ L E++
Sbjct: 84 VQIVPGQNTLVFYEAENLSNKDIIGTSIYNVTPNKAGKYFVKIHCFCFEEQLLKAREKV 142
>sp|Q1RJ56|COXZ_RICBR Cytochrome c oxidase assembly protein CtaG OS=Rickettsia bellii
(strain RML369-C) GN=ctaG PE=3 SV=1
Length = 180
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ + PG+ L FY +N +++ I+G S YNV P AG+YF KI CFCFEEQ L E++
Sbjct: 84 VQIVPGQNTLVFYETENLSDNDIIGTSIYNVTPNKAGKYFVKIHCFCFEEQLLKAGEKVL 143
Query: 71 I---FAPKKPHHNEHKMRS 86
+ F K N+ +MR
Sbjct: 144 MPVTFYIDKDFENDPEMRD 162
>sp|Q92RG6|COXZ_RHIME Cytochrome c oxidase assembly protein CtaG OS=Rhizobium meliloti
(strain 1021) GN=ctaG PE=1 SV=1
Length = 198
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET Y AKN ++P G +T+NV P AG YFNK+QCFCF E L P EE++
Sbjct: 90 IDVRIGETVQIMYRAKNLASTPTTGQATFNVTPMAAGAYFNKVQCFCFTETTLEPGEEME 149
Query: 71 I 71
+
Sbjct: 150 M 150
>sp|C3MHJ5|COXZ_RHISN Cytochrome c oxidase assembly protein CtaG OS=Rhizobium sp. (strain
NGR234) GN=ctaG PE=3 SV=1
Length = 199
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET Y AKN ++ P G +T+NV P AG YFNK+QCFCF E L P EE++
Sbjct: 90 IDVRIGETVQVMYRAKNLSSKPATGQATFNVTPMAAGAYFNKVQCFCFTETTLQPGEEME 149
Query: 71 I 71
+
Sbjct: 150 M 150
>sp|Q5FGG9|COXZ_EHRRG Cytochrome c oxidase assembly protein CtaG OS=Ehrlichia ruminantium
(strain Gardel) GN=ctaG PE=3 SV=1
Length = 177
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 13 VYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEE 68
V PGE L FY A+N TN + G++ YNV P+ G+YFNK+ CFCF +Q L+P+++
Sbjct: 83 VKPGEQKLIFYRAENLTNEYVSGMAVYNVTPYKVGKYFNKVACFCFTKQTLSPYQK 138
>sp|Q5HA73|COXZ_EHRRW Cytochrome c oxidase assembly protein CtaG OS=Ehrlichia ruminantium
(strain Welgevonden) GN=ctaG PE=3 SV=1
Length = 177
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 13 VYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEE 68
V PGE L FY A+N TN + G++ YNV P+ G+YFNK+ CFCF +Q L+P+++
Sbjct: 83 VKPGEQKLIFYRAENLTNEYVSGMAVYNVTPYKVGKYFNKVACFCFTKQTLSPYQK 138
>sp|Q04302|COXZ_EHRRU Cytochrome c oxidase assembly protein CtaG OS=Ehrlichia ruminantium
GN=ctaG PE=3 SV=1
Length = 153
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 13 VYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEE 68
V PGE L FY A+N TN + G++ YNV P+ G+YFNK+ CFCF +Q L+P+++
Sbjct: 83 VKPGEQKLIFYRAENLTNEYVSGMAVYNVTPYKVGKYFNKVACFCFTKQTLSPYQK 138
>sp|Q4UM75|COXZ_RICFE Cytochrome c oxidase assembly protein CtaG OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=ctaG PE=3 SV=1
Length = 187
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEEL 69
+ + PG+ L FY +N +N+ I+G S YNV P AG+YF KI CFCFEEQ L E++
Sbjct: 84 VQIVPGQNTLVFYETENLSNNDIIGTSVYNVTPNKAGKYFVKIHCFCFEEQLLKADEKV 142
>sp|A6U6U8|COXZ_SINMW Cytochrome c oxidase assembly protein CtaG OS=Sinorhizobium medicae
(strain WSM419) GN=ctaG PE=3 SV=1
Length = 198
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET Y A+N ++P G +T+NV P AG YFNK+QCFCF E L P EE++
Sbjct: 90 IDVRIGETVQITYRARNLASTPTTGQATFNVTPMAAGAYFNKVQCFCFTETTLQPGEEME 149
Query: 71 I 71
+
Sbjct: 150 M 150
>sp|Q92IL2|COXZ_RICCN Cytochrome c oxidase assembly protein CtaG OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ctaG PE=3 SV=1
Length = 188
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEEL 69
+ + PG+ L FY +N +++ I+G S YNV P AG+YF KI CFCFEEQ L E +
Sbjct: 84 VQIVPGQNTLVFYETENLSDNDIIGTSVYNVTPNKAGKYFVKIHCFCFEEQLLKAGERV 142
>sp|A7IPB8|COXZ_XANP2 Cytochrome c oxidase assembly protein CtaG OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=ctaG PE=3
SV=1
Length = 203
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
G T+LA YTA N ++ +TYNV P AG YF K+QCFCF+EQ L P+E+L++
Sbjct: 102 GATSLAHYTAANRSSMETHANATYNVSPPQAGAYFVKLQCFCFDEQTLAPNEKLEM 157
>sp|B3PSB4|COXZ_RHIE6 Cytochrome c oxidase assembly protein CtaG OS=Rhizobium etli
(strain CIAT 652) GN=ctaG PE=3 SV=1
Length = 202
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET +TA+N +N G + +NV P +AG YFNK+QCFCF E L P E+L++
Sbjct: 96 GETIQVKFTAENRSNETQRGQAVFNVTPGEAGVYFNKVQCFCFTETDLKPGEKLEM 151
>sp|A6WWG2|COXZ_OCHA4 Cytochrome c oxidase assembly protein CtaG OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ctaG PE=3
SV=1
Length = 203
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A+N + P G +++NV P AG YFNK++CFCF + L P E+++
Sbjct: 94 VTVRIGETTMIKYEARNLFDQPTYGRASFNVAPGRAGAYFNKVECFCFTDTTLQPGEDME 153
Query: 71 I 71
+
Sbjct: 154 M 154
>sp|B5ZSV4|COXZ_RHILW Cytochrome c oxidase assembly protein CtaG OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=ctaG PE=3
SV=1
Length = 202
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET +TA+N +N G + +NV P +AG YFNK+QCFCF E L P E+L +
Sbjct: 96 GETIQVHFTAENRSNETQRGQAVFNVTPGEAGVYFNKVQCFCFTETDLKPGEKLDM 151
>sp|Q1MKI3|COXZ_RHIL3 Cytochrome c oxidase assembly protein CtaG OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=ctaG PE=3 SV=1
Length = 202
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET +TA+N +N G + +NV P +AG YFNK+QCFCF E L P E+L +
Sbjct: 96 GETIQVNFTAENRSNETQRGQAVFNVTPGEAGVYFNKVQCFCFTETDLKPGEKLDM 151
>sp|Q2KBM0|COXZ_RHIEC Cytochrome c oxidase assembly protein CtaG OS=Rhizobium etli
(strain CFN 42 / ATCC 51251) GN=ctaG PE=3 SV=1
Length = 202
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET + A+N +N G + +NV P +AG YFNK+QCFCF E L P E+L++
Sbjct: 96 GETIQVNFVAENKSNETQRGQAVFNVTPGEAGAYFNKVQCFCFTETDLKPGEKLEM 151
>sp|Q985W8|COXZ_RHILO Cytochrome c oxidase assembly protein CtaG OS=Rhizobium loti
(strain MAFF303099) GN=ctaG PE=3 SV=1
Length = 206
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET A Y A N + P+ G +T+NV P AG YFNK++CFCF + L P E + +
Sbjct: 92 GETVQAHYQATNKFDRPVTGRATFNVQPELAGPYFNKVECFCFTDTSLKPGETVDM 147
>sp|Q8UHB2|COXZ_AGRT5 Cytochrome c oxidase assembly protein CtaG OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=ctaG PE=3 SV=2
Length = 202
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
GET + A N + G + +NV P +AG YFNK++CFCF E L P E L++
Sbjct: 96 GETIKVTFKATNRSPVATTGTAVFNVTPMEAGAYFNKVECFCFTETTLQPGETLEM 151
>sp|B0CKF6|COXZ_BRUSI Cytochrome c oxidase assembly protein CtaG OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=ctaG PE=3 SV=1
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|Q8YFQ7|COXZ_BRUME Cytochrome c oxidase assembly protein CtaG OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=ctaG
PE=3 SV=2
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|C0RHH8|COXZ_BRUMB Cytochrome c oxidase assembly protein CtaG OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=ctaG PE=3 SV=1
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|Q8G261|COXZ_BRUSU Cytochrome c oxidase assembly protein CtaG OS=Brucella suis biovar
1 (strain 1330) GN=ctaG PE=3 SV=1
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|A9M8Z5|COXZ_BRUC2 Cytochrome c oxidase assembly protein CtaG OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=ctaG PE=3 SV=1
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|A5VP42|COXZ_BRUO2 Cytochrome c oxidase assembly protein CtaG OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=ctaG PE=3 SV=1
Length = 201
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GET + Y A N G +++NV P AG YFNK++CFCF + L P E+L+
Sbjct: 91 VTVRIGETTMIKYEAHNLFGEETYGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLE 150
Query: 71 I 71
+
Sbjct: 151 L 151
>sp|P56939|COXZ_BRAJA Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium
japonicum (strain USDA 110) GN=ctaG PE=3 SV=1
Length = 214
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V G+ FYT N G + YNV P G YF KI CFCF EQ + P E+ +
Sbjct: 103 IEVNIGQVTTVFYTVTNQAARTTAGQAAYNVAPLTVGSYFQKINCFCFTEQTMAPGEKRE 162
Query: 71 I 71
+
Sbjct: 163 M 163
>sp|A4Z2D0|COXZ_BRASO Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium sp.
(strain ORS278) GN=ctaG PE=3 SV=1
Length = 219
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GE +YT N + + + YNV P +G YF KI CFCF EQ + P E +
Sbjct: 108 IEVAIGEVVTVYYTVTNQSARTTMAQAAYNVTPLTSGAYFQKINCFCFTEQTMAPGETRE 167
Query: 71 I 71
+
Sbjct: 168 M 168
>sp|Q07HB0|COXZ_RHOP5 Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain BisA53) GN=ctaG PE=3 SV=1
Length = 208
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
G+ +Y N G + YNV P G YF KI CFCF +Q L PHE ++
Sbjct: 102 GQVTTVYYKVTNRAAHETTGQAAYNVAPLTVGAYFQKINCFCFTDQTLGPHETREL 157
>sp|Q1QHV9|COXZ_NITHX Cytochrome c oxidase assembly protein CtaG OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=ctaG1 PE=3 SV=1
Length = 216
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
++V GE A +YT N + G + YNV P G YF KI CFCF EQ L P E+ +
Sbjct: 105 INVRIGEVATVYYTVTNHAATATTGQAAYNVTPLTVGSYFTKINCFCFTEQTLAPGEKRE 164
Query: 71 I 71
+
Sbjct: 165 M 165
>sp|A5EAA0|COXZ_BRASB Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=ctaG PE=3 SV=1
Length = 216
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 11 LHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQ 70
+ V GE +YT N + + + YNV P +G YF KI CFCF EQ + P E +
Sbjct: 106 IEVAIGEVVTVYYTVTNQSARTTMAQAAYNVTPLTSGVYFQKINCFCFTEQTMAPGETRE 165
Query: 71 I 71
+
Sbjct: 166 M 166
>sp|B3QF26|COXZ_RHOPT Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain TIE-1) GN=ctaG PE=3 SV=1
Length = 208
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%)
Query: 16 GETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEELQI 71
G+ +Y N + S VG + YNV P G YF KI CFCF EQ L E +
Sbjct: 102 GKVVTVYYRITNLSRSDTVGQAAYNVTPLTVGSYFTKINCFCFTEQPLAAGESRDM 157
>sp|Q11KD0|COXZ_MESSB Cytochrome c oxidase assembly protein CtaG OS=Mesorhizobium sp.
(strain BNC1) GN=ctaG PE=3 SV=1
Length = 202
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 9 LTLHVYPGETALAFYTAKNPTNSPIVGISTYNVVPFDAGQYFNKIQCFCFEEQQLNPHEE 68
+TL + GET Y A+N + G +TYNV P AG YFNKI+CFCF +Q L P +
Sbjct: 91 ITLRI--GETTEIAYVARNNAPTTTTGTATYNVAPALAGAYFNKIECFCFTKQSLEPGQT 148
Query: 69 LQI 71
++
Sbjct: 149 YEM 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,828,922
Number of Sequences: 539616
Number of extensions: 1435656
Number of successful extensions: 2234
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2180
Number of HSP's gapped (non-prelim): 57
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)