BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4842
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14764|GBRD_HUMAN Gamma-aminobutyric acid receptor subunit delta OS=Homo sapiens
GN=GABRD PE=1 SV=2
Length = 452
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKENYLG-EINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N LG + D++W P ++VN + ++ LI +QPDG +LY
Sbjct: 95 WRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 154
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
S R+ T+ C M+L K+P DEQEC L LES
Sbjct: 155 SIRITSTVACDMDLAKYPMDEQECMLDLES 184
>sp|P22933|GBRD_MOUSE Gamma-aminobutyric acid receptor subunit delta OS=Mus musculus
GN=Gabrd PE=2 SV=1
Length = 449
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKENYLG-EINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N LG + D++W P ++VN + ++ LI +QPDG +LY
Sbjct: 95 WRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 154
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
S R+ T+ C M+L K+P DEQEC L LES
Sbjct: 155 SIRITSTVACDMDLAKYPLDEQECMLDLES 184
>sp|P18506|GBRD_RAT Gamma-aminobutyric acid receptor subunit delta OS=Rattus norvegicus
GN=Gabrd PE=2 SV=2
Length = 449
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKENYLG-EINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N LG + D++W P ++VN + ++ LI +QPDG +LY
Sbjct: 95 WRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 154
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
S R+ T+ C M+L K+P DEQEC L LES
Sbjct: 155 SIRITSTVACDMDLAKYPMDEQECMLDLES 184
>sp|P50573|GBRR3_RAT Gamma-aminobutyric acid receptor subunit rho-3 OS=Rattus norvegicus
GN=Gabrr3 PE=1 SV=1
Length = 464
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RL+ + N + R ++W P ++ V+ S I + ++I++ V PD
Sbjct: 107 LRHYWKDERLSFPSTTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPD 166
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VL+S R+ V+ +C M+ +FP D Q C L LES
Sbjct: 167 GNVLFSLRITVSAMCFMDFSRFPLDTQNCSLELES 201
>sp|P63138|GBRB2_RAT Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus
norvegicus GN=Gabrb2 PE=1 SV=1
Length = 474
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIES 180
>sp|D1LYT2|GBRB2_MACMU Gamma-aminobutyric acid receptor subunit beta-2 OS=Macaca mulatta
GN=GABRB2 PE=2 SV=1
Length = 512
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIES 180
>sp|P47870|GBRB2_HUMAN Gamma-aminobutyric acid receptor subunit beta-2 OS=Homo sapiens
GN=GABRB2 PE=1 SV=2
Length = 512
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIES 180
>sp|P63137|GBRB2_MOUSE Gamma-aminobutyric acid receptor subunit beta-2 OS=Mus musculus
GN=Gabrb2 PE=1 SV=2
Length = 512
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIES 180
>sp|P0C2W5|GBRB2_BOVIN Gamma-aminobutyric acid receptor subunit beta-2 (Fragment) OS=Bos
taurus GN=GABRB2 PE=1 SV=1
Length = 472
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL++N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 89 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 148
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 149 GLRITTTTACMMDLRRYPLDEQNCTLEIES 178
>sp|P28472|GBRB3_HUMAN Gamma-aminobutyric acid receptor subunit beta-3 OS=Homo sapiens
GN=GABRB3 PE=1 SV=1
Length = 473
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P63079|GBRB3_RAT Gamma-aminobutyric acid receptor subunit beta-3 OS=Rattus
norvegicus GN=Gabrb3 PE=1 SV=1
Length = 473
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P63080|GBRB3_MOUSE Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus musculus
GN=Gabrb3 PE=2 SV=1
Length = 473
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P56475|GBRR1_MOUSE Gamma-aminobutyric acid receptor subunit rho-1 OS=Mus musculus
GN=Gabrr1 PE=2 SV=2
Length = 480
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RL+ + N + R ++W P ++ V+ S I + ++++ VQPD
Sbjct: 125 LRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPD 184
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ +FP D Q C L +ES
Sbjct: 185 GKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIES 219
>sp|P50572|GBRR1_RAT Gamma-aminobutyric acid receptor subunit rho-1 OS=Rattus norvegicus
GN=Gabrr1 PE=1 SV=2
Length = 480
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RL+ + N + R ++W P ++ V+ S I + ++++ VQPD
Sbjct: 125 LRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPD 184
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ +FP D Q C L +ES
Sbjct: 185 GKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIES 219
>sp|P19019|GBRB3_CHICK Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus gallus
GN=GABRB3 PE=2 SV=1
Length = 476
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA+ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P24046|GBRR1_HUMAN Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapiens
GN=GABRR1 PE=2 SV=2
Length = 479
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RL+ + N + R ++W P ++ V+ S I + ++++ VQPD
Sbjct: 124 LRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPD 183
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ +FP D Q C L +ES
Sbjct: 184 GKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIES 218
>sp|A8MPY1|GBRR3_HUMAN Gamma-aminobutyric acid receptor subunit rho-3 OS=Homo sapiens
GN=GABRR3 PE=2 SV=2
Length = 467
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLA--HNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RL+ A ++ + L ++W P ++ V+ S I + ++I++ V PD
Sbjct: 110 LRHYWKDERLSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPD 169
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VL S R+ V+ +C M+ +FP D Q C L LES
Sbjct: 170 GNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELES 204
>sp|P08220|GBRB1_BOVIN Gamma-aminobutyric acid receptor subunit beta-1 OS=Bos taurus
GN=GABRB1 PE=2 SV=1
Length = 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL+++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P07727|GLRA1_RAT Glycine receptor subunit alpha-1 OS=Rattus norvegicus GN=Glra1 PE=1
SV=4
Length = 457
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA+N + +++ + D +W P L+ NE + + L+ + +
Sbjct: 92 LRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRN 151
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ +TL C M+LK FP D Q C + LES
Sbjct: 152 GNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES 186
>sp|Q64018|GLRA1_MOUSE Glycine receptor subunit alpha-1 OS=Mus musculus GN=Glra1 PE=1 SV=2
Length = 457
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA+N + +++ + D +W P L+ NE + + L+ + +
Sbjct: 92 LRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRN 151
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ +TL C M+LK FP D Q C + LES
Sbjct: 152 GNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES 186
>sp|P50571|GBRB1_MOUSE Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus musculus
GN=Gabrb1 PE=1 SV=1
Length = 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL+++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P15431|GBRB1_RAT Gamma-aminobutyric acid receptor subunit beta-1 OS=Rattus
norvegicus GN=Gabrb1 PE=2 SV=1
Length = 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL+++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P18505|GBRB1_HUMAN Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens
GN=GABRB1 PE=2 SV=2
Length = 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RL+++ N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 92 WKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P DEQ C L +ES
Sbjct: 152 GLRITTTAACMMDLRRYPLDEQNCTLEIES 181
>sp|P57695|GLRA1_BOVIN Glycine receptor subunit alpha-1 OS=Bos taurus GN=GLRA1 PE=2 SV=1
Length = 457
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA+N + +++ + D +W P L+ NE + + L+ + +
Sbjct: 92 LRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRN 151
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ +TL C M+LK FP D Q C + LES
Sbjct: 152 GNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES 186
>sp|P23415|GLRA1_HUMAN Glycine receptor subunit alpha-1 OS=Homo sapiens GN=GLRA1 PE=1 SV=2
Length = 457
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA+N + +++ + D +W P L+ NE + + L+ + +
Sbjct: 92 LRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRN 151
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ +TL C M+LK FP D Q C + LES
Sbjct: 152 GNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES 186
>sp|Q0II76|GBRR2_BOVIN Gamma-aminobutyric acid receptor subunit rho-2 OS=Bos taurus
GN=GABRR2 PE=2 SV=4
Length = 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RLA + N + R ++W P ++ V+ S I + +I++ V PD
Sbjct: 104 LRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPD 163
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ FP D Q C L LES
Sbjct: 164 GQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 198
>sp|P24045|GBRB4_CHICK Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus
GN=GABRB4 PE=2 SV=1
Length = 488
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAHNAKE-NYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA+N N + + D++W P Y +N+ S + G ++ +I + PDGTVLY
Sbjct: 91 WRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLY 150
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
R+ T C+M+L+++P D+Q C L +ES
Sbjct: 151 GLRITTTAACMMDLRRYPLDQQNCTLEIES 180
>sp|O09028|GBRP_RAT Gamma-aminobutyric acid receptor subunit pi OS=Rattus norvegicus
GN=Gabrp PE=2 SV=1
Length = 440
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGT 60
+R RW DPRL +++ + L + +W P Y+V S + + LI + +GT
Sbjct: 88 LRQRWTDPRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGT 147
Query: 61 VLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
VLY+ R+ T+ C M+L K+P D Q C L LES
Sbjct: 148 VLYALRITTTVTCNMDLSKYPMDTQTCKLQLES 180
>sp|Q8QZW7|GBRP_MOUSE Gamma-aminobutyric acid receptor subunit pi OS=Mus musculus
GN=Gabrp PE=2 SV=1
Length = 440
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGT 60
+R RW DPRL +++ + L + +W P Y+V S + + LI + +GT
Sbjct: 88 LRQRWTDPRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGT 147
Query: 61 VLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
VLY+ R+ T+ C M+L K+P D Q C L LES
Sbjct: 148 VLYALRITTTVTCNMDLSKYPMDTQTCKLQLES 180
>sp|P56476|GBRR2_MOUSE Gamma-aminobutyric acid receptor subunit rho-2 OS=Mus musculus
GN=Gabrr2 PE=2 SV=4
Length = 465
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RLA + N + R ++W P ++ V+ S I + +I++ V PD
Sbjct: 104 LRHYWRDERLAFPSSSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPD 163
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ FP D Q C L LES
Sbjct: 164 GHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 198
>sp|P28476|GBRR2_HUMAN Gamma-aminobutyric acid receptor subunit rho-2 OS=Homo sapiens
GN=GABRR2 PE=2 SV=5
Length = 465
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RLA ++ N + R ++W P ++ V+ S + +I++ V PD
Sbjct: 104 LRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPD 163
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ FP D Q C L LES
Sbjct: 164 GHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 198
>sp|P47742|GBRR2_RAT Gamma-aminobutyric acid receptor subunit rho-2 OS=Rattus norvegicus
GN=Gabrr2 PE=1 SV=3
Length = 465
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLR--DRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R+ W D RLA + N + R ++W P ++ V+ S + +I++ V PD
Sbjct: 104 LRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPD 163
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ VT +C M+ FP D Q C L LES
Sbjct: 164 GHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 198
>sp|P24524|GLRA3_RAT Glycine receptor subunit alpha-3 OS=Rattus norvegicus GN=Glra3 PE=2
SV=1
Length = 464
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 97 LRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 156
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 157 GNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLES 191
>sp|Q91XP5|GLRA3_MOUSE Glycine receptor subunit alpha-3 OS=Mus musculus GN=Glra3 PE=2 SV=2
Length = 464
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 97 LRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 156
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 157 GNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLES 191
>sp|O75311|GLRA3_HUMAN Glycine receptor subunit alpha-3 OS=Homo sapiens GN=GLRA3 PE=2 SV=2
Length = 464
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 97 LRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 156
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 157 GNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLES 191
>sp|O00591|GBRP_HUMAN Gamma-aminobutyric acid receptor subunit pi OS=Homo sapiens
GN=GABRP PE=1 SV=1
Length = 440
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGT 60
+R RW+D RL +++ + L + +W P Y+V S + + LI + +GT
Sbjct: 88 LRQRWMDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGT 147
Query: 61 VLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
VLY+ R+ T+ C M+L K+P D Q C L LES
Sbjct: 148 VLYALRITTTVACNMDLSKYPMDTQTCKLQLES 180
>sp|Q5EA06|GBRP_BOVIN Gamma-aminobutyric acid receptor subunit pi OS=Bos taurus GN=GABRP
PE=2 SV=1
Length = 440
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGT 60
+R RW D RL +++ + L + +W P Y+V S + + LI + +GT
Sbjct: 88 LRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGT 147
Query: 61 VLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
VLY+ R+ T+ C M+L K+P D Q C L LES
Sbjct: 148 VLYALRITTTVACNMDLSKYPMDTQTCKLQLES 180
>sp|Q94900|GLUCL_DROME Glutamate-gated chloride channel OS=Drosophila melanogaster
GN=GluClalpha PE=1 SV=2
Length = 456
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEINLRD--RVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
R +W D RL + + L + L + RVW P L+ NE + ++ I + P+
Sbjct: 89 FREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPN 148
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G+VLYS R+ +TL C MNLK +P D Q C L + S
Sbjct: 149 GSVLYSIRISLTLACPMNLKLYPLDRQICSLRMAS 183
>sp|Q9JLF1|GBRT_MOUSE Gamma-aminobutyric acid receptor subunit theta OS=Mus musculus
GN=Gabrq PE=2 SV=1
Length = 638
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAH-NAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA+ N + + +++W P Y VN D+ + ++ + + PDGTV Y
Sbjct: 114 WKDTRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTVENRVFQLHPDGTVRY 173
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
RL T C ++L+KFP D+Q C L +ES
Sbjct: 174 GIRLTTTAACSLDLQKFPMDKQSCKLEVES 203
>sp|Q5JXX5|GLRA4_HUMAN Glycine receptor subunit alpha-4 OS=Homo sapiens GN=GLRA4 PE=2 SV=3
Length = 417
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRL++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 98 LRQQWNDPRLSYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 157
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL + L CLM+LK FP D Q C + LES
Sbjct: 158 GNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLES 192
>sp|P23416|GLRA2_HUMAN Glycine receptor subunit alpha-2 OS=Homo sapiens GN=GLRA2 PE=2 SV=1
Length = 452
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W D RLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 98 LRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKN 157
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 158 GKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLES 192
>sp|P22771|GLRA2_RAT Glycine receptor subunit alpha-2 OS=Rattus norvegicus GN=Glra2 PE=1
SV=1
Length = 452
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W D RLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 98 LRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKN 157
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 158 GKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLES 192
>sp|Q7TNC8|GLRA2_MOUSE Glycine receptor subunit alpha-2 OS=Mus musculus GN=Glra2 PE=2 SV=1
Length = 452
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W D RLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 98 LRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKN 157
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL +TL C M+LK FP D Q C + LES
Sbjct: 158 GKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLES 192
>sp|O93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 OS=Danio rerio GN=glra1 PE=2 SV=1
Length = 444
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA++ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 88 LRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKN 147
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS R+ + L C M+LK FP D Q C + LES
Sbjct: 148 GNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLES 182
>sp|Q9UN88|GBRT_HUMAN Gamma-aminobutyric acid receptor subunit theta OS=Homo sapiens
GN=GABRQ PE=2 SV=2
Length = 632
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 5 WVDPRLAH-NAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVLY 63
W D RLA+ N + + +++W P Y +N D+ + ++ + + PDGTV Y
Sbjct: 114 WKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRY 173
Query: 64 STRLKVTLLCLMNLKKFPFDEQECPLVLES 93
RL T C ++L KFP D+Q C LV+ES
Sbjct: 174 GIRLTTTAACSLDLHKFPMDKQACNLVVES 203
>sp|Q24352|GBRAL_DROME Gamma-aminobutyric acid receptor alpha-like OS=Drosophila
melanogaster GN=Grd PE=1 SV=1
Length = 686
Score = 65.5 bits (158), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 2 RYRWVDPRLAHNAKENYLG-EINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGT 60
R WVD RLA ++ L +++ R+W P Y N S + + + + +G
Sbjct: 161 RQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGR 220
Query: 61 VLYSTRLKVTLLCLMNLKKFPFDEQECPL 89
VLYS+RL + C MNL FP D Q+CPL
Sbjct: 221 VLYSSRLTIKAGCPMNLADFPMDIQKCPL 249
>sp|Q61603|GLRA4_MOUSE Glycine receptor subunit alpha-4 OS=Mus musculus GN=Glra4 PE=2 SV=3
Length = 456
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 1 MRYRWVDPRLAHNAKENYLGEIN--LRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPD 58
+R +W DPRLA+ + +++ + D +W P L+ NE + + L+ + +
Sbjct: 97 LRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 156
Query: 59 GTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
G VLYS RL + L C M+LK FP D Q C + LES
Sbjct: 157 GNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLES 191
>sp|Q09453|GLRB4_CAEEL Glycine receptor subunit beta-type 4 OS=Caenorhabditis elegans
GN=ggr-1 PE=3 SV=2
Length = 473
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 4 RWVDPRLAHN-AKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQPDGTVL 62
+WVD RL HN K + + L +W P LY N + + + L+ + P+GTV
Sbjct: 96 KWVDHRLQHNNTKRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVW 155
Query: 63 YSTRLKVTLLCLMNLKKFPFDEQECPL 89
Y R+ +T+LC+ +L ++P D Q C L
Sbjct: 156 YDCRISLTVLCMQDLARYPLDSQNCGL 182
>sp|P20781|GLRB_RAT Glycine receptor subunit beta OS=Rattus norvegicus GN=Glrb PE=1
SV=1
Length = 496
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 1 MRYRWVDPRLA----HNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQ 56
+R +W DPRL + + + +W P L+ NE + +++IL+ +
Sbjct: 107 LRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIF 166
Query: 57 PDGTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
DG VL S RL +TL C ++L FP D Q C + LES
Sbjct: 167 RDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLES 203
>sp|Q9GJS9|GLRB_BOVIN Glycine receptor subunit beta OS=Bos taurus GN=GLRB PE=2 SV=1
Length = 497
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 1 MRYRWVDPRLA----HNAKENYLGEINLRDRVWTPHLYLVNEHDSRIMGSGRQDILISVQ 56
+R +W DPRL + + + +W P L+ NE + +++IL+ +
Sbjct: 107 LRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIF 166
Query: 57 PDGTVLYSTRLKVTLLCLMNLKKFPFDEQECPLVLES 93
DG VL S RL +TL C ++L FP D Q C + LES
Sbjct: 167 RDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLES 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,444,217
Number of Sequences: 539616
Number of extensions: 1270364
Number of successful extensions: 2337
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 2162
Number of HSP's gapped (non-prelim): 227
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)