Your job contains 1 sequence.
>psy4844
MTYHVVQSSVWLVMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTS
SSKKYMEPHYLLLDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISN
PSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSEDVRN
RDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGI
KNQSLLQGMNLYLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4844
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039183 - symbol:Dis3 "Dis3" species:7227 "Drosoph... 526 1.1e-49 1
ZFIN|ZDB-GENE-080213-3 - symbol:dis3 "DIS3 mitotic contro... 523 2.0e-49 1
RGD|1304646 - symbol:Dis3 "DIS3 mitotic control homolog (... 514 2.5e-49 1
UNIPROTKB|F2Z2C0 - symbol:DIS3 "Exosome complex exonuclea... 508 1.1e-48 1
UNIPROTKB|F1N1R4 - symbol:DIS3 "Uncharacterized protein" ... 511 4.0e-48 1
UNIPROTKB|E2RNY6 - symbol:DIS3 "Uncharacterized protein" ... 509 6.8e-48 1
UNIPROTKB|Q9Y2L1 - symbol:DIS3 "Exosome complex exonuclea... 508 8.8e-48 1
MGI|MGI:1919912 - symbol:Dis3 "DIS3 mitotic control homol... 508 8.8e-48 1
UNIPROTKB|E1BXX6 - symbol:DIS3 "Uncharacterized protein" ... 504 2.4e-47 1
CGD|CAL0003527 - symbol:orf19.5229 species:5476 "Candida ... 457 3.2e-42 1
UNIPROTKB|G4NDV8 - symbol:MGG_00193 "Mitotic control prot... 417 6.1e-38 1
DICTYBASE|DDB_G0293614 - symbol:DDB_G0293614 "putative ex... 410 3.6e-37 1
SGD|S000005381 - symbol:DIS3 "Exosome core complex cataly... 399 5.3e-36 1
POMBASE|SPBC26H8.10 - symbol:dis3 "3'-5' exoribonuclease ... 386 1.2e-34 1
ASPGD|ASPL0000011287 - symbol:AN3657 species:162425 "Emer... 343 5.5e-30 1
UNIPROTKB|F1NKN5 - symbol:LOC100857630 "Uncharacterized p... 220 9.4e-22 2
UNIPROTKB|Q0P4R5 - symbol:dis3l "DIS3-like exonuclease 1"... 196 3.1e-21 2
ZFIN|ZDB-GENE-070209-95 - symbol:dis3l "DIS3 mitotic cont... 204 5.0e-21 2
MGI|MGI:2143272 - symbol:Dis3l "DIS3 mitotic control homo... 231 5.4e-18 1
UNIPROTKB|F1SJJ9 - symbol:DIS3L "Uncharacterized protein"... 229 8.9e-18 1
UNIPROTKB|I3LEH1 - symbol:DIS3L "Uncharacterized protein"... 229 9.0e-18 1
RGD|1308959 - symbol:Dis3l "DIS3 mitotic control homolog ... 228 1.1e-17 1
UNIPROTKB|A0JN80 - symbol:DIS3L "DIS3-like exonuclease 1"... 227 1.5e-17 1
UNIPROTKB|F1MEA6 - symbol:DIS3L "DIS3-like exonuclease 1"... 227 1.5e-17 1
UNIPROTKB|F1PK78 - symbol:DIS3L "Uncharacterized protein"... 221 6.1e-17 1
UNIPROTKB|Q8TF46 - symbol:DIS3L "DIS3-like exonuclease 1"... 221 6.4e-17 1
UNIPROTKB|Q5R5N8 - symbol:DIS3L "DIS3-like exonuclease 1"... 221 6.4e-17 1
UNIPROTKB|Q6GN11 - symbol:dis3l "DIS3-like exonuclease 1"... 177 3.0e-16 2
WB|WBGene00001001 - symbol:dis-3 species:6239 "Caenorhabd... 182 5.7e-12 1
UNIPROTKB|E9PI20 - symbol:DIS3L "DIS3-like exonuclease 1"... 122 2.3e-07 1
GENEDB_PFALCIPARUM|MAL13P1.289 - symbol:MAL13P1.289 "mito... 139 2.4e-06 1
UNIPROTKB|Q8IDB6 - symbol:MAL13P1.289 "Mitotic control pr... 139 2.4e-06 1
DICTYBASE|DDB_G0268186 - symbol:DDB_G0268186 species:4468... 117 0.00021 2
>FB|FBgn0039183 [details] [associations]
symbol:Dis3 "Dis3" species:7227 "Drosophila melanogaster"
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=ISS] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISS;IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005652 "nuclear lamina" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0071027 "nuclear RNA
surveillance" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0022008 GO:GO:0003723 GO:GO:0004540 GO:GO:0010468
GO:GO:0005652 GO:GO:0000176 InterPro:IPR022966 PROSITE:PS01175
SMART:SM00670 GO:GO:0071027 FlyBase:FBgn0039183 EMBL:AJ276897
ProteinModelPortal:Q9BI20 STRING:Q9BI20 PRIDE:Q9BI20
InParanoid:Q9BI20 ArrayExpress:Q9BI20 Bgee:Q9BI20 Uniprot:Q9BI20
Length = 983
Score = 526 (190.2 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 112/251 (44%), Positives = 158/251 (62%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
++KIVREHYLRDD+ CGSELC C E ++ TS A + S + PHYL+
Sbjct: 16 ILKIVREHYLRDDIGCGSELCRECFQNEVY--QL-TSQHA-------NKSTLFKFPHYLV 65
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
LDTN++L+QID+LEE L NV+++ T+L EVKHRSS++YKR +++ + +R FYVFVNEH
Sbjct: 66 LDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFYVFVNEH 125
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLES-------------AVRVILLSEDVR 179
H ETY ++EP E+ NDRNDRA+R WY++HL++ A RV+LL++D
Sbjct: 126 HKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVLLTDDAA 185
Query: 180 NRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSL--YPLHATPSEIH 237
NR A G+L ++ Y+ +L + L+DKLS K S K+ L YP H + E+
Sbjct: 186 NRAKAEAEGILVTTAAEYVKSLEDFPLLMDKLSHKTF---DSEKNGLPQYPPHLSMKELL 242
Query: 238 AGIKNQSLLQG 248
G++ LLQG
Sbjct: 243 EGLRQNKLLQG 253
>ZFIN|ZDB-GENE-080213-3 [details] [associations]
symbol:dis3 "DIS3 mitotic control homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
ZFIN:ZDB-GENE-080213-3 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 SMART:SM00670 CTD:22894 EMBL:BX571717 IPI:IPI00803594
RefSeq:XP_001336850.2 UniGene:Dr.51536 ProteinModelPortal:E7FE01
Ensembl:ENSDART00000085454 GeneID:100003553 KEGG:dre:100003553
NextBio:20785882 Bgee:E7FE01 Uniprot:E7FE01
Length = 950
Score = 523 (189.2 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 112/242 (46%), Positives = 149/242 (61%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V+KIVREHYLRDD+ CGSE+C C D+ P +L + S PHYL+
Sbjct: 16 VLKIVREHYLRDDIWCGSEVCKECK------DEAP-----VLQEETCIESNLCPYPHYLI 64
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QIDILE+P + NVI++QT+LQEV+HRS+ VYKR+KD I + FY F NEH
Sbjct: 65 PDTNVVLHQIDILEDPLIRNVIILQTVLQEVRHRSAPVYKRIKDAIHEKEKHFYTFTNEH 124
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESA-----VRVILLSEDVRNRDLATQS 187
H ET++E+E GES NDRNDRA+R A WY +HL A ++V+LL+ D N++ A Q
Sbjct: 125 HRETFIEREQGESANDRNDRAIRVAAKWYTDHLAKATDGGTLKVVLLTNDRANKEKAEQF 184
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
GL E YI +L L+D+L+ + E + L+P H S I GIKN +
Sbjct: 185 GLTVYRCEEYIKSLVGNPELVDRLAMTSDDQNEITGSKLLFPEHLPLSRIQTGIKNGVFI 244
Query: 247 QG 248
QG
Sbjct: 245 QG 246
>RGD|1304646 [details] [associations]
symbol:Dis3 "DIS3 mitotic control homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=ISO]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0016075 "rRNA catabolic
process" evidence=ISO] [GO:0071034 "CUT catabolic process"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001900 Pfam:PF00773 InterPro:IPR006596 RGD:1304646
GO:GO:0003723 GO:GO:0004540 SMART:SM00670 IPI:IPI00392641
PRIDE:D3ZAM5 Ensembl:ENSRNOT00000012182 UCSC:RGD:1304646
Uniprot:D3ZAM5
Length = 565
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 106/241 (43%), Positives = 155/241 (64%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V+KIVREHYLRDD+ CG+ C AC A P D+ SS + PHYLL
Sbjct: 16 VVKIVREHYLRDDIGCGTPACSACGAAHAG----PALELQPRDQ--ASSLCPW--PHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE+P + NVI++QT+LQEV++RS+ +YKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPIYKRIRDVTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHL----ESAVRVILLSEDVRNRDLATQSG 188
H ETY+EQE GE+ NDRNDRA+R A WY EHL E+ ++VIL++ D +N++ A + G
Sbjct: 128 HKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKMSAENQLQVILITNDKKNKEKAAEEG 187
Query: 189 LLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQ 247
+ + E Y+ +L+ L+D+L+ + + E ++ H S++ GIK+ S LQ
Sbjct: 188 IPAFTCEEYVKSLTANPELIDRLACLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYLQ 247
Query: 248 G 248
G
Sbjct: 248 G 248
>UNIPROTKB|F2Z2C0 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 InterPro:IPR006596 GO:GO:0003723
GO:GO:0004540 EMBL:AL138695 SMART:SM00670 EMBL:AL391384
HGNC:HGNC:20604 ChiTaRS:DIS3 IPI:IPI00978109
ProteinModelPortal:F2Z2C0 SMR:F2Z2C0 PRIDE:F2Z2C0
Ensembl:ENST00000490646 ArrayExpress:F2Z2C0 Bgee:F2Z2C0
Uniprot:F2Z2C0
Length = 559
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 110/242 (45%), Positives = 154/242 (63%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
VMKIVREHYLRDD+ CG+ C AC + P D P SS +PHYLL
Sbjct: 16 VMKIVREHYLRDDIGCGAPGCAACGGAH----EGPALEPQPQD--PASSVCP--QPHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE+P + NVI++QT+LQEV++RS+ VYKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLE--SA---VRVILLSEDVRNRDLATQS 187
H ETYVEQE GE+ NDRNDRA+R A WY EHL+ SA ++VI ++ D RN++ A +
Sbjct: 128 HRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEE 187
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
G+ + E Y+ +L+ L+D+L+ E E ++ H S++ GIK+ + L
Sbjct: 188 GIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYL 247
Query: 247 QG 248
QG
Sbjct: 248 QG 249
>UNIPROTKB|F1N1R4 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 EMBL:DAAA02033486 EMBL:DAAA02033485
IPI:IPI01017508 Ensembl:ENSBTAT00000026500 Uniprot:F1N1R4
Length = 951
Score = 511 (184.9 bits), Expect = 4.0e-48, P = 4.0e-48
Identities = 107/242 (44%), Positives = 154/242 (63%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
VMKIVREHYLRDD+ CG+ C CD + P LD+ +S +PHYLL
Sbjct: 16 VMKIVREHYLRDDIGCGASGCAVCDGAH----EGPVLELQPLDR----ASSLCPQPHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE+P + NVI++QT+LQEV++RS+ VYKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDMTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHL-----ESAVRVILLSEDVRNRDLATQS 187
H ETYVEQ GE+ NDRNDRA+R A WY EHL E+ ++VI ++ D +N++ A +
Sbjct: 128 HRETYVEQLQGENSNDRNDRAIRVAAKWYNEHLKNMSAENRLQVIFITNDRKNKEKAIEE 187
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
G+ + E YI +L+ L+D+L+ E E +++ H S++ GIK+ + L
Sbjct: 188 GIPAFTCEEYIKSLTANPELIDRLACLSEEGNEIESGKTIFSEHLPLSKLQQGIKSGTYL 247
Query: 247 QG 248
QG
Sbjct: 248 QG 249
>UNIPROTKB|E2RNY6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AAEX03013240
RefSeq:XP_542610.3 Ensembl:ENSCAFT00000008080 GeneID:485491
KEGG:cfa:485491 NextBio:20859485 Uniprot:E2RNY6
Length = 958
Score = 509 (184.2 bits), Expect = 6.8e-48, P = 6.8e-48
Identities = 109/242 (45%), Positives = 153/242 (63%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
VMKIVREHYLRDD+ CG+ C AC + P LD P SS PHYLL
Sbjct: 16 VMKIVREHYLRDDIGCGAPGCAACGGAH----EGPVLEPQPLD--PASSLCP--RPHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE+P + NVI++QT+LQEV++RS+ VYKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHL-----ESAVRVILLSEDVRNRDLATQS 187
H ETYVEQE GE+ NDRNDRA+R A WY EHL E+ ++VI ++ D +N++ A +
Sbjct: 128 HRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSAENHLQVIFITNDRKNKEKAIEE 187
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
G+ + E Y+ +L+ L+D+L+ E E ++ H S++ GIK+ + L
Sbjct: 188 GIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIENGRIIFSEHLPLSKLQQGIKSGTYL 247
Query: 247 QG 248
QG
Sbjct: 248 QG 249
>UNIPROTKB|Q9Y2L1 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0000178 "exosome (RNase complex)" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP]
[GO:0004519 "endonuclease activity" evidence=IMP] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071034 "CUT catabolic
process" evidence=IMP] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0043928
"exonucleolytic nuclear-transcribed mRNA catabolic process involved
in deadenylation-dependent decay" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005829 GO:GO:0005654 GO:GO:0003723
GO:GO:0005085 GO:GO:0004519 GO:GO:0016075 GO:GO:0006364
EMBL:AL138695 GO:GO:0000176 GO:GO:0000175 GO:GO:0043928
eggNOG:COG0557 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 OMA:MPWSITE SMART:SM00670 EMBL:CH471093
GO:GO:0071034 EMBL:AL391384 EMBL:AF330044 EMBL:AB023225
EMBL:AL832266 EMBL:AK314715 EMBL:AL080158 EMBL:BC056143
IPI:IPI00183462 IPI:IPI00746351 PIR:JE0110 RefSeq:NP_001121698.1
RefSeq:NP_055768.3 UniGene:Hs.740506 ProteinModelPortal:Q9Y2L1
SMR:Q9Y2L1 IntAct:Q9Y2L1 STRING:Q9Y2L1 PhosphoSite:Q9Y2L1
DMDM:73620993 SWISS-2DPAGE:Q9Y2L1 PaxDb:Q9Y2L1 PRIDE:Q9Y2L1
Ensembl:ENST00000377767 Ensembl:ENST00000377780 GeneID:22894
KEGG:hsa:22894 UCSC:uc001vix.4 UCSC:uc001viy.4 CTD:22894
GeneCards:GC13M073329 H-InvDB:HIX0011365 HGNC:HGNC:20604
HPA:HPA039281 MIM:607533 neXtProt:NX_Q9Y2L1 PharmGKB:PA162383628
InParanoid:Q9Y2L1 OrthoDB:EOG45B1DT PhylomeDB:Q9Y2L1 ChiTaRS:DIS3
GenomeRNAi:22894 NextBio:43511 ArrayExpress:Q9Y2L1 Bgee:Q9Y2L1
CleanEx:HS_DIS3 Genevestigator:Q9Y2L1 GermOnline:ENSG00000083520
Uniprot:Q9Y2L1
Length = 958
Score = 508 (183.9 bits), Expect = 8.8e-48, P = 8.8e-48
Identities = 110/242 (45%), Positives = 154/242 (63%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
VMKIVREHYLRDD+ CG+ C AC + P D P SS +PHYLL
Sbjct: 16 VMKIVREHYLRDDIGCGAPGCAACGGAH----EGPALEPQPQD--PASSVCP--QPHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE+P + NVI++QT+LQEV++RS+ VYKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLE--SA---VRVILLSEDVRNRDLATQS 187
H ETYVEQE GE+ NDRNDRA+R A WY EHL+ SA ++VI ++ D RN++ A +
Sbjct: 128 HRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEE 187
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
G+ + E Y+ +L+ L+D+L+ E E ++ H S++ GIK+ + L
Sbjct: 188 GIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYL 247
Query: 247 QG 248
QG
Sbjct: 248 QG 249
>MGI|MGI:1919912 [details] [associations]
symbol:Dis3 "DIS3 mitotic control homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISO] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=ISO] [GO:0000178 "exosome (RNase complex)"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0071034 "CUT catabolic process" evidence=ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 MGI:MGI:1919912
InterPro:IPR006596 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0003723 GO:GO:0005085 GO:GO:0004519 GO:GO:0016075
GO:GO:0006364 GO:GO:0000176 GO:GO:0000175 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 OrthoDB:EOG45B1DT
EMBL:AK012840 EMBL:AK032091 EMBL:AK129259 IPI:IPI00407764
RefSeq:NP_082591.2 UniGene:Mm.163339 ProteinModelPortal:Q9CSH3
SMR:Q9CSH3 STRING:Q9CSH3 PhosphoSite:Q9CSH3 PaxDb:Q9CSH3
PRIDE:Q9CSH3 Ensembl:ENSMUST00000042471 GeneID:72662 KEGG:mmu:72662
UCSC:uc007uuw.1 InParanoid:Q9CSH3 NextBio:336687 Bgee:Q9CSH3
CleanEx:MM_DIS3 Genevestigator:Q9CSH3 Uniprot:Q9CSH3
Length = 958
Score = 508 (183.9 bits), Expect = 8.8e-48, P = 8.8e-48
Identities = 106/242 (43%), Positives = 154/242 (63%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V+KIVREHYLRDD+ CG+ C AC A P D+ SS + PHYLL
Sbjct: 16 VVKIVREHYLRDDIGCGAPACSACGGAHAG----PALELQPRDQ--ASSLCPW--PHYLL 67
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNEH 132
DTN++L QID+LE P + NVI++QT++QEV++RS+ +YKR++D+ +N + FY F NEH
Sbjct: 68 PDTNVLLHQIDVLEHPAIRNVIVLQTVMQEVRNRSAPIYKRIRDVTNNQEKHFYTFTNEH 127
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHL-----ESAVRVILLSEDVRNRDLATQS 187
H ETY+EQE GE+ NDRNDRA+R A WY EHL +S ++VIL++ D +N++ A Q
Sbjct: 128 HKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKRVAADSQLQVILITNDRKNKEKAVQE 187
Query: 188 GLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
G+ + E Y+ +L+ L+D+L+ + + E ++ H S++ GIK+ S L
Sbjct: 188 GIPAFTCEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYL 247
Query: 247 QG 248
QG
Sbjct: 248 QG 249
>UNIPROTKB|E1BXX6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0071034 "CUT catabolic process" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AADN02042596
IPI:IPI00592352 RefSeq:XP_417016.2 ProteinModelPortal:E1BXX6
Ensembl:ENSGALT00000027368 GeneID:418821 KEGG:gga:418821
NextBio:20821959 Uniprot:E1BXX6
Length = 963
Score = 504 (182.5 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 105/245 (42%), Positives = 152/245 (62%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYME-PHYL 71
V+K+VREHYLRDD+ CG++ C C + P L+ P+ ++ PHYL
Sbjct: 16 VVKVVREHYLRDDIPCGADACPLCPVRPGQ----PLG----LEARPSGAASSLCPGPHYL 67
Query: 72 LLDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNE 131
L DTN++L QIDILE+P + NVI++QT+LQEV++RS+ VYKR++D+I NP + FY F NE
Sbjct: 68 LPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIGNPEKHFYSFTNE 127
Query: 132 HHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESA-------VRVILLSEDVRNRDLA 184
HH ETY++QE GES NDRNDRA+R WY EHL+ ++VI L+ D N++ A
Sbjct: 128 HHRETYIQQEQGESSNDRNDRAIRVAVKWYSEHLKKIQNEENEDIQVIFLTNDRNNKEKA 187
Query: 185 TQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLYPLHATPSEIHAGIKNQ 243
+ G+ + E YI +L + L+D+L+ + E ++P H S++ GIK+
Sbjct: 188 LEEGITAYTCEEYIKSLIDNPDLVDRLACVSDEGKEIESGKIIFPEHIPLSKLQQGIKSG 247
Query: 244 SLLQG 248
LQG
Sbjct: 248 IYLQG 252
>CGD|CAL0003527 [details] [associations]
symbol:orf19.5229 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0071028 "nuclear mRNA surveillance"
evidence=IEA] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IEA]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IEA] [GO:0070651 "nonfunctional rRNA decay"
evidence=IEA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IEA] InterPro:IPR001900
InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126 SMART:SM00955
CGD:CAL0003527 InterPro:IPR006596 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 SMART:SM00670 EMBL:AACQ01000070
EMBL:AACQ01000071 RefSeq:XP_716298.1 RefSeq:XP_716360.1
ProteinModelPortal:Q5A3P1 SMR:Q5A3P1 STRING:Q5A3P1 GeneID:3641956
GeneID:3642063 KEGG:cal:CaO19.12694 KEGG:cal:CaO19.5229
Uniprot:Q5A3P1
Length = 1004
Score = 457 (165.9 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 100/251 (39%), Positives = 157/251 (62%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDT--KEAILDKIPTSSKAILDKIPTSSSKKYMEPHYL 71
+KIVREHYLR+D+ C S +C +C K ++P K IL PT ++K EPHYL
Sbjct: 33 LKIVREHYLRNDIPCYSTICQSCQDIIKPDAQGELP---KFILSSNPTKTAKG--EPHYL 87
Query: 72 LLDTNIILEQIDILEEPTLC--NVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFV 129
+LDTNIIL ID+LE C +VI+ QT+L+EVK+RS +Y+RL++L+ + ++F VF
Sbjct: 88 VLDTNIILHAIDLLEN-NQCFYDVIIPQTVLEEVKNRSFPIYQRLRNLVKSEDKRFIVFH 146
Query: 130 NEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSEDVRNRDLATQSGL 189
NE++ +TY+ + E++NDRNDRA+R+VA WY+ HL S ++ + D NR+ A + G+
Sbjct: 147 NEYNEQTYINRNKNETINDRNDRAIRKVAQWYQTHLPSKIKTFFICNDKDNRNKAIKEGI 206
Query: 190 LTSSIEGYISTLSNGEPLLDKLSKKEAVVE-----TSV------KDSLYPLHATPSEIHA 238
S+ YI +L N + L D + + ++ E T+ +++ +P + + + I A
Sbjct: 207 DARSLVEYIESLPNADDLSDLIPQDDSTFENDKNSTTATAGSDDEETSFPEYYSNARIMA 266
Query: 239 GIKNQSLLQGM 249
GIKN +L QG+
Sbjct: 267 GIKNGTLYQGI 277
>UNIPROTKB|G4NDV8 [details] [associations]
symbol:MGG_00193 "Mitotic control protein dis3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773
PROSITE:PS50126 SMART:SM00955 InterPro:IPR006596 GO:GO:0005730
EMBL:CM001235 GO:GO:0004521 GO:GO:0000049 GO:GO:0071039
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 InterPro:IPR022967
SMART:SM00316 InterPro:IPR022966 PROSITE:PS01175 KO:K12585
SMART:SM00670 GO:GO:0071028 RefSeq:XP_003718924.1
ProteinModelPortal:G4NDV8 SMR:G4NDV8 EnsemblFungi:MGG_00193T0
GeneID:2674544 KEGG:mgr:MGG_00193 Uniprot:G4NDV8
Length = 990
Score = 417 (151.9 bits), Expect = 6.1e-38, P = 6.1e-38
Identities = 97/251 (38%), Positives = 145/251 (57%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V KIVRE YLR D+ C S+LC C K A D +L + P + +K + + HYL+
Sbjct: 31 VQKIVREVYLRQDIPCSSKLCTQCP-KNAPTDAAGNMINFVLSERP-AGTKDFPQGHYLV 88
Query: 73 LDTNIILEQIDILEEP-TLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNE 131
DTN L +D+ E+ + C+VI++Q +L+EV++RS +Y RL L + ++FYVF NE
Sbjct: 89 PDTNAFLTAMDLFEQSDSFCDVIVLQIVLEEVRNRSLPLYNRLIGLTKSDEKRFYVFFNE 148
Query: 132 HHYETYVEQEPGESVNDRNDRALRRVATWYEEHL-----------ESAVRVILLSEDVRN 180
ET+V + ES+NDRNDRA+RR A WY EHL ++ V++LS D N
Sbjct: 149 FRLETHVSRGQDESINDRNDRAVRRAAKWYSEHLAGGSAKSKKKGQNLPAVVMLSNDRAN 208
Query: 181 RDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDS--LYPLHATPSEIHA 238
A + G+ S+ Y+S L + E L+D + + + TSVK S +YP + T S++
Sbjct: 209 LRKAKEEGIPACSLAQYVSGLKDSERLMDLVPESQDDEITSVKSSGHVYPEYFTMSKMMT 268
Query: 239 GIKNQSLLQGM 249
G+K+ L QG+
Sbjct: 269 GVKSGLLHQGI 279
>DICTYBASE|DDB_G0293614 [details] [associations]
symbol:DDB_G0293614 "putative exoribonuclease"
species:44689 "Dictyostelium discoideum" [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
dictyBase:DDB_G0293614 InterPro:IPR006596 GO:GO:0003723
GO:GO:0004540 EMBL:AAFI02000218 GO:GO:0000176 eggNOG:COG0557
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
SMART:SM00670 RefSeq:XP_629050.1 ProteinModelPortal:Q54BH9
STRING:Q54BH9 EnsemblProtists:DDB0234145 GeneID:8629340
KEGG:ddi:DDB_G0293614 InParanoid:Q54BH9 ProtClustDB:CLSZ2429248
Uniprot:Q54BH9
Length = 1006
Score = 410 (149.4 bits), Expect = 3.6e-37, P = 3.6e-37
Identities = 97/247 (39%), Positives = 148/247 (59%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPT-SSKAIL-DKIPTSSSKKYMEPHY 70
++K+V E YLRDD+ CG + C C K L++ T +A+L ++I T S K
Sbjct: 16 IIKVVNEIYLRDDIPCGHDSCKECKIK---LERRTTVEDRALLSNEINTIDSDKI----- 67
Query: 71 LLLDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVN 130
L+LDTN+IL QID+LE+PT+ N I++ T+L EVK ++ +++ R++D+I SRKFYV+ N
Sbjct: 68 LILDTNVILHQIDLLEDPTIKNCIILSTVLDEVKSQNRAIFNRIRDVIKESSRKFYVYSN 127
Query: 131 EHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLES-AVRVILLSEDVRNRDLATQSGL 189
E+ T + +E GES NDRNDRA+R WY+ HL +++V+L++ D N A GL
Sbjct: 128 EYSTFTSITRENGESPNDRNDRAIRVATQWYKSHLHKYSIKVLLITNDKDNLKKAKSLGL 187
Query: 190 LTSSIEGYISTLSNGEP-LLDKLSKKEAVVETSVKDS------LYPLHATPSEIHAGIKN 242
+I+ + LS+ P L+DKLS +++ KD+ Y H S + GIK
Sbjct: 188 DCQTIQDLVFELSDKNPSLVDKLSDPND--DSNEKDNDESKRFQYQEHKPMSMLTEGIKG 245
Query: 243 QSLLQGM 249
L+QG+
Sbjct: 246 GKLIQGI 252
>SGD|S000005381 [details] [associations]
symbol:DIS3 "Exosome core complex catalytic subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0000467 "exonucleolytic
trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IC] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0071028 "nuclear mRNA surveillance" evidence=IMP]
[GO:0070651 "nonfunctional rRNA decay" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IMP;IDA] [GO:0000178 "exosome
(RNase complex)" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IMP]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IGI;IMP;IDA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IMP]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=IDA;IMP] [GO:0070481 "nuclear-transcribed mRNA
catabolic process, non-stop decay" evidence=IC] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IC]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IC]
InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126
SMART:SM00955 SGD:S000005381 InterPro:IPR006596 GO:GO:0005739
GO:GO:0005730 EMBL:BK006948 GO:GO:0004521 GO:GO:0000049
GO:GO:0071039 GO:GO:0071035 GO:GO:0071038 GO:GO:0000176
GO:GO:0000175 GO:GO:0000177 GO:GO:0000467 GO:GO:0070651
GO:GO:0071042 GO:GO:0070478 GO:GO:0070481 InterPro:IPR022967
SMART:SM00316 GO:GO:0071051 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 OMA:MPWSITE OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028
PDB:2WP8 PDBsum:2WP8 EMBL:D76430 EMBL:Z74763 PIR:S66704
RefSeq:NP_014621.1 PDB:2VNU PDBsum:2VNU ProteinModelPortal:Q08162
SMR:Q08162 DIP:DIP-2355N IntAct:Q08162 MINT:MINT-614156
STRING:Q08162 PaxDb:Q08162 PeptideAtlas:Q08162 EnsemblFungi:YOL021C
GeneID:854138 KEGG:sce:YOL021C CYGD:YOL021c
EvolutionaryTrace:Q08162 NextBio:975871 Genevestigator:Q08162
GermOnline:YOL021C Uniprot:Q08162
Length = 1001
Score = 399 (145.5 bits), Expect = 5.3e-36, P = 5.3e-36
Identities = 92/246 (37%), Positives = 143/246 (58%)
Query: 15 KIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLLD 74
KIVREHYLR D+ C S C C + + D K IL P S + HY++LD
Sbjct: 34 KIVREHYLRSDIPCLSRSCTKCP-QIVVPDAQNELPKFILSDSPLELSAP-IGKHYVVLD 91
Query: 75 TNIILEQIDILEEPTLC--NVILVQTILQEVKHRSSSVYKRLKDLI--SNPSRKFYVFVN 130
TN++L+ ID+LE P C +VI+ Q +L EV+++S VY RL+ L S+ ++F VF N
Sbjct: 92 TNVVLQAIDLLENPN-CFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRDSDDHKRFIVFHN 150
Query: 131 EHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESA-VRVILLSEDVRNRDLAT---Q 186
E T+VE+ P E++NDRNDRA+R+ WY EHL+ + V+L++ D NR+ AT +
Sbjct: 151 EFSEHTFVERLPNETINDRNDRAIRKTCQWYSEHLKPYDINVVLVTNDRLNREAATKEVE 210
Query: 187 SGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSL----YPLHATPSEIHAGIKN 242
S ++T S+ YI L N + + D + + ++ + +D+ +P + + + + G+KN
Sbjct: 211 SNIITKSLVQYIELLPNADDIRDSIPQMDSFDKDLERDTFSDFTFPEYYSTARVMGGLKN 270
Query: 243 QSLLQG 248
L QG
Sbjct: 271 GVLYQG 276
>POMBASE|SPBC26H8.10 [details] [associations]
symbol:dis3 "3'-5' exoribonuclease subunit Dis3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISO] [GO:0000177 "cytoplasmic
exosome (RNase complex)" evidence=ISO] [GO:0000465 "exonucleolytic
trimming to generate mature 5'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008536 "Ran GTPase binding" evidence=IPI] [GO:0032853
"positive regulation of Ran GTPase activity" evidence=IMP]
[GO:0034661 "ncRNA catabolic process" evidence=ISO] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=ISO] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=ISO] [GO:0070651 "nonfunctional rRNA decay" evidence=ISO]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=ISO] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=ISO]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=ISO] InterPro:IPR001900 InterPro:IPR003029
Pfam:PF00773 PROSITE:PS50126 SMART:SM00955 PomBase:SPBC26H8.10
InterPro:IPR006596 GO:GO:0051301 GO:GO:0007067 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0040008 GO:GO:0004521
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 GO:GO:0071042
GO:GO:0070478 GO:GO:0070481 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 EMBL:M74094 PIR:A41944
RefSeq:NP_596653.1 ProteinModelPortal:P37202 SMR:P37202
STRING:P37202 PRIDE:P37202 EnsemblFungi:SPBC26H8.10.1
GeneID:2540398 KEGG:spo:SPBC26H8.10 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH BRENDA:3.1.13.1 NextBio:20801525 GO:GO:0000465
GO:GO:0032853 SMART:SM00670 Uniprot:P37202
Length = 970
Score = 386 (140.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 91/249 (36%), Positives = 144/249 (57%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKA-ILDKIPTSSSKKYMEP--- 68
V K+VRE YLR+D+ C S C C +K +P S+ +L+ I S ++E
Sbjct: 30 VQKVVREQYLRNDIPCQSRACPLCRSK------LPKDSRGNVLEPI-LSEKPMFLEKFGH 82
Query: 69 HYLLLDTNIILEQIDILEEPT-LCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYV 127
HYL+ D+NI ID LE P +VI++QT+ E+ +S +Y R+K L +++F
Sbjct: 83 HYLIPDSNIFYHCIDALEHPNNFFDVIILQTVFSEISSKSIPLYNRMKRLCQEKTKRFTP 142
Query: 128 FVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLES-AVRVILLSEDVRNRDLATQ 186
F NE +T+VE+ ES NDRNDRA+R A+W+ HL S ++++LL++D N LA +
Sbjct: 143 FSNEFFVDTFVERLDDESANDRNDRAIRNAASWFASHLASLGIKIVLLTDDRENARLAAE 202
Query: 187 SGLLTSSIEGYISTLSNGEPLLDKLSK-KEAV-----VETSVKDSLYPLHATPSEIHAGI 240
G+ S+++ Y+ L + E LLD +S +A+ VE+ K+ +Y LH + S + A I
Sbjct: 203 QGIQVSTLKDYVQYLPDSEILLDMVSAIADAIASKEQVESGTKN-VYELHWSMSRLLACI 261
Query: 241 KNQSLLQGM 249
KN + +G+
Sbjct: 262 KNGEVHKGL 270
>ASPGD|ASPL0000011287 [details] [associations]
symbol:AN3657 species:162425 "Emericella nidulans"
[GO:0071028 "nuclear mRNA surveillance" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IEA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IEA]
[GO:0070651 "nonfunctional rRNA decay" evidence=IEA] [GO:0071038
"nuclear polyadenylation-dependent tRNA catabolic process"
evidence=IEA] [GO:0004521 "endoribonuclease activity" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005730 EMBL:BN001302 EMBL:AACD01000061 GO:GO:0004521
GO:GO:0000049 GO:GO:0071039 GO:GO:0071035 GO:GO:0071038
GO:GO:0000467 GO:GO:0070651 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028 RefSeq:XP_661261.1
ProteinModelPortal:Q5B723 SMR:Q5B723 STRING:Q5B723
EnsemblFungi:CADANIAT00005078 GeneID:2873078 KEGG:ani:AN3657.2
Uniprot:Q5B723
Length = 1015
Score = 343 (125.8 bits), Expect = 5.5e-30, P = 5.5e-30
Identities = 85/249 (34%), Positives = 138/249 (55%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V KIVRE YLR D+ C S L + +L + P + A P HY++
Sbjct: 31 VQKIVRELYLRQDIPCSSRLFVPF-----VLSEQPAGTTAF----PRG--------HYIV 73
Query: 73 LDTNIILEQIDILEEP-TLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSRKFYVFVNE 131
DTN +L +D+ E +VI++QT+L+E+K++S +Y RL LI ++FY+F NE
Sbjct: 74 PDTNALLNGMDLFEHTGAFYDVIILQTVLEELKNQSLPLYNRLLALIKTDEKRFYLFFNE 133
Query: 132 HHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVR---------VILLSEDVRNRD 182
ET+V +E ES+NDRNDRA+R VA WY +HL + + ++++++D N
Sbjct: 134 FRLETHVRREQDESINDRNDRAVRTVAKWYMDHLRAVTKSKKEKSIPAIVVITDDKENLR 193
Query: 183 LATQSGLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKDSLY-PLHATPSEIHAGI 240
A + + S+E Y+S L + + LLD +++ +EA + LY P + + S+I G+
Sbjct: 194 KAKEESVTALSLENYVSGLEDADRLLDMINESREAREAKEARGELYYPEYYSMSKIMTGL 253
Query: 241 KNQSLLQGM 249
+ +L QG+
Sbjct: 254 RAGNLHQGV 262
>UNIPROTKB|F1NKN5 [details] [associations]
symbol:LOC100857630 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AADN02038918 EMBL:AADN02038919
EMBL:AADN02038920 IPI:IPI00571818 Ensembl:ENSGALT00000012364
Uniprot:F1NKN5
Length = 1082
Score = 220 (82.5 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 55/191 (28%), Positives = 94/191 (49%)
Query: 69 HYLLLDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSS-VYKRLKDLISNPSRKFYV 127
HY++ D ++ + ++ILE P L +I +QT Q V+H+ Y +L++LI + V
Sbjct: 82 HYVVPDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQKGRRQYNKLRNLIKDARHDCTV 141
Query: 128 FVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLA 184
F NE H +Y +E GES+ R++ A WY H + V++++ED +R
Sbjct: 142 FANEFHQNSYQPREKGESMEKWQTRSIYNAAVWYYNHCLGQMPVVMVTEDEDAIRQYGNE 201
Query: 185 TQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIH 237
T G+ S + Y+ L L D + +++E +E+ + YP H +
Sbjct: 202 T-GGVFVISFKNYLDNFWPDLKAAHELFDSILQARREREIESQENNGKEYPEHLPMEVLE 260
Query: 238 AGIKNQSLLQG 248
AGIK+ +QG
Sbjct: 261 AGIKSGRYIQG 271
Score = 74 (31.1 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 14 MKIVREHYLRDDLSCGSELCLA 35
+++VREHYLR D+ C S LC A
Sbjct: 46 VRVVREHYLRPDVPCRSALCRA 67
>UNIPROTKB|Q0P4R5 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InterPro:IPR022966 PROSITE:PS01175 EMBL:BC121935
RefSeq:NP_001072835.1 UniGene:Str.52789 ProteinModelPortal:Q0P4R5
STRING:Q0P4R5 GeneID:780296 KEGG:xtr:780296 Xenbase:XB-GENE-1013178
Uniprot:Q0P4R5
Length = 1039
Score = 196 (74.1 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 57/192 (29%), Positives = 93/192 (48%)
Query: 69 HYLLLDTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYV 127
HY++ D I+ + +++LE P L +I++QT Q V+H R YKRL L+ + +
Sbjct: 52 HYVVPDCQILQDYLEVLEFPELRGIIIMQTACQSVQHQRGRRQYKRLCSLLRDTRHDCIL 111
Query: 128 FVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLA 184
F NE Y+ +E GES R + WY +H + + V++++ED +R +
Sbjct: 112 FSNEFQNHAYLPREMGESALAWQTRCIYNSCVWYYQHCQKKIPVVMVTEDKSVIRQYNTE 171
Query: 185 TQSGLLTSS---IEGYISTLSNGEPLLDKLSK--KEAVVETSVKDSL-YPLHATPSEI-H 237
TQ + S +E + L L L + +E +E+ + YP H P EI
Sbjct: 172 TQEVYVVSFQIYLETFWPNLKGALELYKSLKETHRERELESREGNGKEYPEHL-PLEILE 230
Query: 238 AGIKNQSLLQGM 249
AGIK+ QG+
Sbjct: 231 AGIKSGRYQQGV 242
Score = 93 (37.8 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDK 45
++ VREHYLR+D+ CGS LCL C +L +
Sbjct: 17 VRAVREHYLREDVRCGSALCLTCPRDGKLLSE 48
>ZFIN|ZDB-GENE-070209-95 [details] [associations]
symbol:dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] [GO:0000178 "exosome (RNase complex)" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
ZFIN:ZDB-GENE-070209-95 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CABZ01003662 IPI:IPI00493157
ProteinModelPortal:F1Q9I9 Ensembl:ENSDART00000075176 Bgee:F1Q9I9
Uniprot:F1Q9I9
Length = 1057
Score = 204 (76.9 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 52/188 (27%), Positives = 89/188 (47%)
Query: 69 HYLLLDTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYV 127
HY++ D ++ + ++ILE L ++L QT Q V+H R Y RL+ L+ +P +
Sbjct: 54 HYVVPDVGVVRDFLEILEFRELQGIVLTQTAYQTVQHTRGRRHYNRLRSLLKDPRHDCVL 113
Query: 128 FVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED--VRNRDLAT 185
F NE +Y +E GES + + R + A WY HL V++++ED + A+
Sbjct: 114 FANEFQQYSYCPREKGESQDKWHTRNVYNAAVWYYNHLAGLQPVVMITEDRDAISEFSAS 173
Query: 186 QSGLLTSSIEGYI----STLSNGEPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGIK 241
SG+ S + Y+ L L +++ E + +Y H + AGIK
Sbjct: 174 NSGVFVISTQEYLLGFWPDLQAAHDLYHSIAQTLQERENDGAEKVYTEHLPAEVLEAGIK 233
Query: 242 NQSLLQGM 249
+ +QG+
Sbjct: 234 SGMYIQGI 241
Score = 83 (34.3 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 6 VQSSVWLVMKIVREHYLRDDLSCGSELCLA-CDTKEAILDK 45
+ SS +++VREHY+R+ + CGS LC A C +L +
Sbjct: 10 LNSSKGRKVRVVREHYMREQVPCGSSLCQADCQNVGKVLSR 50
>MGI|MGI:2143272 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:10090 "Mus musculus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 MGI:MGI:2143272 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
OrthoDB:EOG4229HZ InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
EMBL:AK173310 EMBL:AK029974 EMBL:BC056939 IPI:IPI00223964
IPI:IPI00881768 RefSeq:NP_001001295.2 RefSeq:NP_001171255.1
RefSeq:NP_766107.1 UniGene:Mm.268341 ProteinModelPortal:Q8C0S1
SMR:Q8C0S1 STRING:Q8C0S1 PhosphoSite:Q8C0S1 PaxDb:Q8C0S1
PRIDE:Q8C0S1 Ensembl:ENSMUST00000068367 Ensembl:ENSMUST00000113890
Ensembl:ENSMUST00000120760 Ensembl:ENSMUST00000168844 GeneID:213550
KEGG:mmu:213550 UCSC:uc009qbu.2 UCSC:uc009qbw.2
GeneTree:ENSGT00530000063106 InParanoid:Q8C0S1 NextBio:374039
Bgee:Q8C0S1 CleanEx:MM_DIS3L Genevestigator:Q8C0S1 Uniprot:Q8C0S1
Length = 1053
Score = 231 (86.4 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 66/247 (26%), Positives = 115/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC + A K + ++ HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLC----PQPAACRN---DGKLLAAEVT----------HYVIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + +++LE P L VI +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEVLEFPELKGVIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GE++ R++ A WY H E + +++++ED ++ T+ G+
Sbjct: 122 QQHCYLPREKGEAMEKWQTRSIYNSAVWYYHHCEDRMPIVMVTEDEEAIQKYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS-VKDSLYPLHATPSEIHAGIKN 242
S + Y+ L L D + S++E E+ YP H + AGIK+
Sbjct: 181 FVISFKNYLDNFWPDLKAAHDLCDSILQSRRERETESQETHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|F1SJJ9 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:CU062652 Ensembl:ENSSSCT00000005453 Uniprot:F1SJJ9
Length = 1057
Score = 229 (85.7 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 68/247 (27%), Positives = 114/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLC-------------PQPASCHNDGKLLSSDVT----HYMIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GES+ R++ A W+ H + + V++++ED V+ T+ G+
Sbjct: 122 QQSCYLPRERGESMEKWQSRSIYNAAVWFYHHCQDRMPVVMVTEDEEAVQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKN 242
S + Y+ L L + + S++E E+ YP H + AGIK+
Sbjct: 181 FVISFKSYLDNFWPDLKAAHELCESIVQSRRERENESQESHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|I3LEH1 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CU062652
Ensembl:ENSSSCT00000024119 Uniprot:I3LEH1
Length = 1059
Score = 229 (85.7 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 68/247 (27%), Positives = 114/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLC-------------PQPASCHNDGKLLSSDVT----HYMIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GES+ R++ A W+ H + + V++++ED V+ T+ G+
Sbjct: 122 QQSCYLPRERGESMEKWQSRSIYNAAVWFYHHCQDRMPVVMVTEDEEAVQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKN 242
S + Y+ L L + + S++E E+ YP H + AGIK+
Sbjct: 181 FVISFKSYLDNFWPDLKAAHELCESIVQSRRERENESQESHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>RGD|1308959 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S. cerevisiae)-like"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO;ISS] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0016075 "rRNA catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IEA;ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 RGD:1308959
GO:GO:0005886 GO:GO:0005813 GO:GO:0003723 GO:GO:0016075
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 OrthoDB:EOG4229HZ
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:BC085932 IPI:IPI00366657 RefSeq:NP_001008381.1
UniGene:Rn.24884 ProteinModelPortal:Q5U2P0 STRING:Q5U2P0
PRIDE:Q5U2P0 Ensembl:ENSRNOT00000014071 GeneID:363077
KEGG:rno:363077 UCSC:RGD:1308959 InParanoid:Q5U2P0 NextBio:682358
Genevestigator:Q5U2P0 Uniprot:Q5U2P0
Length = 1054
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC T K + ++ HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLCPQPATCR-------NDGKLLSAEVT----------HYVIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + +++LE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEVLEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GE++ R++ A WY H E + +++++ED ++ T+ G+
Sbjct: 122 QQHCYLPREKGEAMEKWQTRSIYNSAVWYYHHCEDRMPIVMVTEDEEAIQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS-VKDSLYPLHATPSEIHAGIKN 242
S + Y+ L L D + S++E E+ YP H + AGIK+
Sbjct: 181 FVISFKNYLDNFWPDLKAAHELCDSIIQSRRERESESQETHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|A0JN80 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0000175
GO:GO:0000177 EMBL:BC126555 IPI:IPI00701147 RefSeq:NP_001071624.1
UniGene:Bt.10856 ProteinModelPortal:A0JN80 STRING:A0JN80
PRIDE:A0JN80 GeneID:777771 KEGG:bta:777771 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InParanoid:A0JN80 OrthoDB:EOG4229HZ NextBio:20924325
InterPro:IPR022966 PROSITE:PS01175 Uniprot:A0JN80
Length = 1053
Score = 227 (85.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 65/245 (26%), Positives = 113/245 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLC-------------PQPATCHNDGKLLSSDVT----HYMVP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L ++ +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIVFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSEDVRN-RDLATQSG-LL 190
Y+ +E GES+ R++ A WY H + + +++++ED + +++G +
Sbjct: 122 QQSCYLPRERGESMEKWQSRSIYNAAAWYYHHCQDRMPIVMVTEDEEAIQQYGSETGGVF 181
Query: 191 TSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKNQ 243
S + Y+ L L + + S++E E+ YP H + AGIK+
Sbjct: 182 VISFKNYLDNFWPDLKAAHELCESILQSRRERENESQESHGKEYPEHVPLEVLEAGIKSG 241
Query: 244 SLLQG 248
+QG
Sbjct: 242 RYIQG 246
>UNIPROTKB|F1MEA6 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
IPI:IPI00701147 InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:DAAA02027893
Ensembl:ENSBTAT00000000481 Uniprot:F1MEA6
Length = 1053
Score = 227 (85.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 65/245 (26%), Positives = 113/245 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPSVPCNSPLC-------------PQPATCHNDGKLLSSDVT----HYMVP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L ++ +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIVFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSEDVRN-RDLATQSG-LL 190
Y+ +E GES+ R++ A WY H + + +++++ED + +++G +
Sbjct: 122 QQSCYLPRERGESMEKWQSRSIYNAAAWYYHHCQDRMPIVMVTEDEEAIQQYGSETGGVF 181
Query: 191 TSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKNQ 243
S + Y+ L L + + S++E E+ YP H + AGIK+
Sbjct: 182 VISFKNYLDNFWPDLKAAHELCESILQSRRERENESQESHGKEYPEHVPLEVLEAGIKSG 241
Query: 244 SLLQG 248
+QG
Sbjct: 242 RYIQG 246
>UNIPROTKB|F1PK78 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AAEX03016225
Ensembl:ENSCAFT00000027369 Uniprot:F1PK78
Length = 1024
Score = 221 (82.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 67/247 (27%), Positives = 113/247 (45%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPSVPCHSPLC-------------PQPAACRNDGKLLSSDVT----HYMIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIIFMQTACQTVQHQRGRRQYNKLRNLLKDARHDCILFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GES+ R++ A WY H + + +++++ED ++ T+ G+
Sbjct: 122 QQYCYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKN 242
S + Y+ L L D + S++E E+ Y H + AGIK+
Sbjct: 181 FVISFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYAEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|Q8TF46 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP;IDA] [GO:0016075
"rRNA catabolic process" evidence=IMP;IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0005886
GO:GO:0005813 GO:GO:0003723 GO:GO:0016075 EMBL:CH471082
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 EMBL:AB075835 EMBL:AK095407 EMBL:AC055855
EMBL:BC014124 EMBL:BC022089 IPI:IPI00291003 IPI:IPI00295876
IPI:IPI00879677 IPI:IPI00879828 RefSeq:NP_001137160.1
RefSeq:NP_588616.1 UniGene:Hs.446251 ProteinModelPortal:Q8TF46
SMR:Q8TF46 IntAct:Q8TF46 STRING:Q8TF46 PhosphoSite:Q8TF46
DMDM:166201903 PaxDb:Q8TF46 PeptideAtlas:Q8TF46 PRIDE:Q8TF46
DNASU:115752 Ensembl:ENST00000319194 Ensembl:ENST00000319212
GeneID:115752 KEGG:hsa:115752 UCSC:uc002app.3 UCSC:uc002apq.2
GeneCards:GC15P066585 HGNC:HGNC:28698 HPA:HPA041805 MIM:614183
neXtProt:NX_Q8TF46 PharmGKB:PA162383675 InParanoid:Q8TF46
OMA:IPRFGIK ChiTaRS:DIS3L GenomeRNAi:115752 NextBio:79674
ArrayExpress:Q8TF46 Bgee:Q8TF46 CleanEx:HS_DIS3L
Genevestigator:Q8TF46 Uniprot:Q8TF46
Length = 1054
Score = 221 (82.9 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 67/247 (27%), Positives = 114/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D SS HY++
Sbjct: 19 LRIVREHYLRPCVPCHSPLC-------------PQPAACSHDGKLLSSDVT----HYVIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GES+ R++ A WY H + + +++++ED ++ T+ G+
Sbjct: 122 QQCCYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKN 242
+ + Y+ L L D + S++E E+ YP H + AGIK+
Sbjct: 181 FVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|Q5R5N8 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9601 "Pongo
abelii" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0003723
GO:GO:0000175 GO:GO:0000177 CTD:115752 HOGENOM:HOG000191945
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:CR860819
RefSeq:NP_001126723.1 UniGene:Pab.8044 ProteinModelPortal:Q5R5N8
GeneID:100173724 KEGG:pon:100173724 Uniprot:Q5R5N8
Length = 1054
Score = 221 (82.9 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 67/247 (27%), Positives = 114/247 (46%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLLL 73
++IVREHYLR + C S LC P + D S+ HY++
Sbjct: 19 LRIVREHYLRPCVPCHSPLC-------------PQPAACSHDGKLLSNDVT----HYVIP 61
Query: 74 DTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEH 132
D ++ + ++ILE P L +I +QT Q V+H R Y +L++L+ + +F NE
Sbjct: 62 DWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEF 121
Query: 133 HYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLATQSGL 189
Y+ +E GES+ R++ A WY H + + +++++ED ++ T+ G+
Sbjct: 122 QQCCYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETE-GV 180
Query: 190 LTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSVKDSL-YPLHATPSEIHAGIKN 242
S + Y+ L L D + S++E E+ YP H + AGIK+
Sbjct: 181 FVISFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKS 240
Query: 243 QSLLQGM 249
+QG+
Sbjct: 241 GRYIQGI 247
>UNIPROTKB|Q6GN11 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8355
"Xenopus laevis" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:BC073711
RefSeq:NP_001086021.1 UniGene:Xl.3437 ProteinModelPortal:Q6GN11
GeneID:444450 KEGG:xla:444450 Xenbase:XB-GENE-1013183
Uniprot:Q6GN11
Length = 1040
Score = 177 (67.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 69 HYLLLDTNIILEQIDILEEPTLCNVILVQTILQEVKH-RSSSVYKRLKDLISNPSRKFYV 127
HY++ D ++ + ++LE P L +I++QT Q V+H R YK+L L+ + +
Sbjct: 53 HYVVPDCQVLQDYQEVLEFPELRGIIIMQTACQAVQHQRGRRQYKKLCSLLRDTRHDCIL 112
Query: 128 FVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLESAVRVILLSED---VRNRDLA 184
F NE Y+ +E GES R + WY +H + + V++++ED + +
Sbjct: 113 FSNEFQNHAYLPREMGESALAWQTRCIYNSCVWYYQHCQKKIPVVMVTEDESVIGKYNTE 172
Query: 185 TQSGLLTSSIEGYISTL-SNGEPLLDKL-SKKEAVVETSVKD-----SLYPLHATPSEI- 236
TQ + S + Y+ T N + L+ S ++ +E ++ YP H P EI
Sbjct: 173 TQE-VYVVSFQIYLETFWPNFKGALELYKSLRDTHLERKLESRESNGKEYPEHL-PLEIL 230
Query: 237 HAGIKNQSLLQGM 249
AGIK+ QG+
Sbjct: 231 EAGIKSGRYKQGV 243
Score = 86 (35.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 14 MKIVREHYLRDDLSCGSELCLACDTKEAILDK 45
++ VREHYLR+D+ CGS LC C +L +
Sbjct: 18 VRAVREHYLREDVRCGSALCHTCPRDGKLLSE 49
>WB|WBGene00001001 [details] [associations]
symbol:dis-3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005737 GO:GO:0040010 GO:GO:0005730
GO:GO:0040018 GO:GO:0000003 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 GO:GO:0000178 GO:GO:0004540 GO:GO:0006364
eggNOG:COG0557 HOGENOM:HOG000191945 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 EMBL:Z70718 PIR:T18925 RefSeq:NP_501835.2
ProteinModelPortal:Q17632 SMR:Q17632 STRING:Q17632 PaxDb:Q17632
EnsemblMetazoa:C04G2.6 GeneID:177875 KEGG:cel:CELE_C04G2.6
UCSC:C04G2.6 CTD:177875 WormBase:C04G2.6 InParanoid:Q17632
NextBio:898756 Uniprot:Q17632
Length = 961
Score = 182 (69.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 62/242 (25%), Positives = 120/242 (49%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDTKEAILDKIPTSSKAILDKIPTSSSKKYMEPHYLL 72
V K E YLR+DLSCG C C K+ T+ ++ P ++K + H L+
Sbjct: 27 VYKRAEERYLRNDLSCGLAQCGTC--KD-----FGTNPLLKIEN-PVRNAK--VGRHALI 76
Query: 73 LDTNIILEQIDILEEPTLCNVILVQTILQEVKHRSSSVYKRLKDLISNPSR-KFYVFVNE 131
+D+ ++ D+ + L ++I+ QT+ + VK ++ YK++ L ++ +F+VF+NE
Sbjct: 77 VDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNSLCYEDAKDRFHVFMNE 136
Query: 132 HHYETYVEQEPGESVNDRNDRALRRVATWYEEHLES---AVRVILLSEDVRNRDLATQSG 188
H ET+ E E ++ R + L A + + H + A V++ ED + R
Sbjct: 137 FHCETFSESSKFEDLS-RGEELLLSTALYLKTHWQKHNVAPVVLVFDEDSKKRMENHYQH 195
Query: 189 LLTSSIEGYISTLSN-G-EPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLL 246
++ ++ YI L + G + LLD+++ E+ + K ++ + + I GI + ++
Sbjct: 196 VMY--LKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQ-IFDEYLSHDRIMEGIASGTIK 252
Query: 247 QG 248
+G
Sbjct: 253 RG 254
>UNIPROTKB|E9PI20 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] GO:GO:0005886 GO:GO:0005737 GO:GO:0005813
EMBL:AC055855 HGNC:HGNC:28698 ChiTaRS:DIS3L IPI:IPI01009000
ProteinModelPortal:E9PI20 SMR:E9PI20 Ensembl:ENST00000532580
ArrayExpress:E9PI20 Bgee:E9PI20 Uniprot:E9PI20
Length = 103
Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 96 VQTILQEVKH-RSSSVYKRLKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRAL 154
+QT Q V+H R Y +L++L+ + +F NE Y+ +E GES+ R++
Sbjct: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
Query: 155 RRVATWYEEHLESAVRVILLSED 177
A WY H + + +++++ED
Sbjct: 61 YNAAVWYYHHCQDRMPIVMVTED 83
>GENEDB_PFALCIPARUM|MAL13P1.289 [details] [associations]
symbol:MAL13P1.289 "mitotic control protein
dis3 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0000178
"exosome (RNase complex)" evidence=ISS] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004527
GO:GO:0000178 GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 RefSeq:XP_001350300.2
EnsemblProtists:MAL13P1.289:mRNA GeneID:813851 KEGG:pfa:MAL13P1.289
EuPathDB:PlasmoDB:PF3D7_1359300 HOGENOM:HOG000281701
ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDT-KEAILDKIPTSSKAILDKIPTSSSKKYMEPHYL 71
+ KIVRE YLR+D+SCG E C C+ K+ +LD S ILD ++ KYM+ Y
Sbjct: 28 INKIVREVYLRNDISCGIEKCNICENNKKKLLDG--ERSILILD---LNTLIKYMDFLYD 82
Query: 72 LLDTNIILEQIDILEEPTLCNVIL---VQTILQEVKHRSSSVYKRLKDLISNPSRKFYVF 128
D + IL + I + N IL ++ + +V S + N +++F VF
Sbjct: 83 C-DIDNILIPLSIYDYIKSFNKILYKKLRNLCYDVDEESI-IEGSSSSSSFNHNKRFCVF 140
Query: 129 VNEHHYETYVEQEPGESVNDRND-RALRRVATWYEEHLESA-VRVI----LLSEDVRNRD 182
VN TYVE ++ + + + ++ W + H ++VI LL ED N D
Sbjct: 141 VNTFCKFTYVEDNKDDTNGFNKELQEIIKIVIWLKHHNNKLNIKVISNNKLLQEDCYNND 200
Query: 183 L 183
+
Sbjct: 201 I 201
>UNIPROTKB|Q8IDB6 [details] [associations]
symbol:MAL13P1.289 "Mitotic control protein dis3 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000178
"exosome (RNase complex)" evidence=ISS] [GO:0004527 "exonuclease
activity" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0004527 GO:GO:0000178
GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966 PROSITE:PS01175
KO:K12585 RefSeq:XP_001350300.2 EnsemblProtists:MAL13P1.289:mRNA
GeneID:813851 KEGG:pfa:MAL13P1.289 EuPathDB:PlasmoDB:PF3D7_1359300
HOGENOM:HOG000281701 ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 13 VMKIVREHYLRDDLSCGSELCLACDT-KEAILDKIPTSSKAILDKIPTSSSKKYMEPHYL 71
+ KIVRE YLR+D+SCG E C C+ K+ +LD S ILD ++ KYM+ Y
Sbjct: 28 INKIVREVYLRNDISCGIEKCNICENNKKKLLDG--ERSILILD---LNTLIKYMDFLYD 82
Query: 72 LLDTNIILEQIDILEEPTLCNVIL---VQTILQEVKHRSSSVYKRLKDLISNPSRKFYVF 128
D + IL + I + N IL ++ + +V S + N +++F VF
Sbjct: 83 C-DIDNILIPLSIYDYIKSFNKILYKKLRNLCYDVDEESI-IEGSSSSSSFNHNKRFCVF 140
Query: 129 VNEHHYETYVEQEPGESVNDRND-RALRRVATWYEEHLESA-VRVI----LLSEDVRNRD 182
VN TYVE ++ + + + ++ W + H ++VI LL ED N D
Sbjct: 141 VNTFCKFTYVEDNKDDTNGFNKELQEIIKIVIWLKHHNNKLNIKVISNNKLLQEDCYNND 200
Query: 183 L 183
+
Sbjct: 201 I 201
>DICTYBASE|DDB_G0268186 [details] [associations]
symbol:DDB_G0268186 species:44689 "Dictyostelium
discoideum" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 dictyBase:DDB_G0268186 EMBL:AAFI02000003
GO:GO:0003723 GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 RefSeq:XP_647622.1 EnsemblProtists:DDB0189843
GeneID:8616436 KEGG:ddi:DDB_G0268186 InParanoid:Q55FB1 OMA:YMILANS
Uniprot:Q55FB1
Length = 1504
Score = 117 (46.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/125 (21%), Positives = 63/125 (50%)
Query: 50 SKAILDKIPTSSSKKYMEPHYLLLDTNIILEQIDILE--EPTLCNVILVQTILQEVKHRS 107
++ +LD ++++ + E + D ILE ++++E + N+++++TI + V++ S
Sbjct: 224 NQLLLDYNNSNNNNEDDEIIITIPDIETILEYLEVIELNDTDFKNIVILETIYKYVQYNS 283
Query: 108 S-SVYKRLKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYEEHLE 166
+ RLK LI + F NE ET+++++ ++ ++ + + WY H
Sbjct: 284 GPKFFDRLKQLIFQTEKSICYFSNELFIETFLDRDNSTNLEIHQNKIISKAVQWYINHFN 343
Query: 167 SAVRV 171
+V
Sbjct: 344 QLSKV 348
Score = 51 (23.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 16 IVREHYLRDDLSCGSELCLAC 36
I +E YLR+D++C C +C
Sbjct: 40 ISKEQYLRNDITCNFLNCDSC 60
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 22 0.49 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 604 (64 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 26.47u 0.08s 26.55t Elapsed: 00:00:21
Total cpu time: 26.48u 0.08s 26.56t Elapsed: 00:00:28
Start: Thu Aug 15 13:44:56 2013 End: Thu Aug 15 13:45:24 2013